BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 035828
         (781 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score = 1032 bits (2669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/807 (63%), Positives = 617/807 (76%), Gaps = 28/807 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G LAHLPTSTSLLTAYS  + F SS ALF E   +DV+ WNAMITA VEN+C  + ++ F
Sbjct: 2   GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLF 61

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++ EG+  DSTTLLI+VSA + M  L QGRV+H +S K G+++DS LCN  ++MYAKC
Sbjct: 62  VELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKC 121

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+SSEC F GM   D +SWN++M GC +NNYP+K L YF++M +S EQADNVSL+ AV
Sbjct: 122 GELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAV 181

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA LGELS+G+VIH  GIKLGY+D  + S  NSLIS+YSQC DI+AAE  F  M  KD
Sbjct: 182 SASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKD 241

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA++DG ALN +  EAFDLLHEMQL+  V+PD  TVV +I LCA+ +LLREGR+VH
Sbjct: 242 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVH 301

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  +RR +G D  + NSL+D YSK   + +AE +F AI P  DLVSWN+MISG       
Sbjct: 302 GLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAI-PERDLVSWNAMISGYSQNGHS 360

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+++L   SQ S STLLAILPSC+S E L+FG+SIHCWQLKLGF+NN + VN+L
Sbjct: 361 REAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSL 420

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           M MYINCGDLVA FSLLQ +S  +D  CWN V+  CTQNGHF EA+K F  M Q  +   
Sbjct: 421 MLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCH 480

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV L NVISACGNLEL F G SLHGLALK+LM  D RVQNALITMYGRC +I++A  +F
Sbjct: 481 DSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF 540

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
               N NLC+WNCMISAFSQNK   RALELF H+EFEPNEI+IV ILSACTQLGVLRHGK
Sbjct: 541 GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGK 600

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           QIHGHV     Q NSF+S+AL DMYSNC               +S AAW+SMISA+G+H 
Sbjct: 601 QIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHS 660

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G +AIELFHEM   G RPTKS+ ISLLSACSHSGLV+EGL YY+NMLE ++V  +TEHH
Sbjct: 661 NGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHH 720

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           VC+VDMLGR+G+L EAYEFI+ +P QP+PGVWGA+LSACS+HGD KMG++VAELLF+LEP
Sbjct: 721 VCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEP 780

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
           ENVGYYISLSNMYVA GRWKDAVE+ +
Sbjct: 781 ENVGYYISLSNMYVAAGRWKDAVELRR 807


>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/795 (62%), Positives = 604/795 (75%), Gaps = 26/795 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G LAHLPTSTSLLTAYS  + F SS ALF E   +DV+ WNAMITA VEN+C  + ++ F
Sbjct: 43  GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLF 102

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++ EG+  DSTTLLI+VSA + M  L QGRV+H +S K G+++DS LCN  ++MYAKC
Sbjct: 103 VELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKC 162

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+SSEC F GM   D +SWN++M GC +NNYP+K L YF++M +S EQADNVSL+ AV
Sbjct: 163 GELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAV 222

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA LGELS+G+VIH  GIKLGY+D  + S  NSLIS+YSQC DI+AAE  F  M  KD
Sbjct: 223 SASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKD 282

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA++DG ALN +  EAFDLLHEMQL+  V+PD  TVV +I LCA+ +LLREGR+VH
Sbjct: 283 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVH 342

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
           G  +RR +G D  + NSL+D YSK   + +AE   ++    +           LF+++L 
Sbjct: 343 GLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHNGHSREAQH-----------LFRQLLQ 391

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             SQ S STLLAILPSC+S E L+FG+SIHCWQLKLGF+NN + VN+LM MYINCGDLVA
Sbjct: 392 SYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVA 451

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
            FSLLQ +S  +D  CWN V+  CTQNGHF EA+K F  M Q  +   DSV L NVISAC
Sbjct: 452 CFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISAC 511

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
           GNLEL F G SLHGLALK+LM  D RVQNALITMYGRC +I++A  +F    N NLC+WN
Sbjct: 512 GNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWN 571

Query: 542 CMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           CMISAFSQNK   RALELF H+EFEPNEI+IV ILSACTQLGVLRHGKQIHGHV     Q
Sbjct: 572 CMISAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQ 631

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            NSF+S+AL DMYSNC               +S AAW+SMISA+G+H  G +AIELFHEM
Sbjct: 632 GNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM 691

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
              G RPTKS+ ISLLSACSHSGLV+EGL YY+NMLE ++V  +TEHHVC+VDMLGR+G+
Sbjct: 692 RECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGR 751

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L EAYEFI+ +P QP+PGVWGA+LSACS+HGD KMG++VAELLF+LEPENVGYYISLSNM
Sbjct: 752 LGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNM 811

Query: 767 YVALGRWKDAVEIGK 781
           YVA GRWKDAVE+ +
Sbjct: 812 YVAAGRWKDAVELRR 826



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 178/700 (25%), Positives = 329/700 (47%), Gaps = 81/700 (11%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           + HCL+ K G +A        +  Y++  D +SS   F  +   D + WN +++  + N 
Sbjct: 34  IAHCLAFKMGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQ 93

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
                +  F E+   G   D+ +L   V+AS+ +G L+ G+V+H +  K G     +  +
Sbjct: 94  CFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSF--L 151

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+LI MY++CG++ ++E  F GM  +D++SWN+++ G A N   +++     +M    +
Sbjct: 152 CNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKM----A 207

Query: 274 VEPDIATVVTLISLCADSLLLRE---GRSVHGYAIRRLLGYDLL----MMNSLMDFYSKS 326
              + A  V+L    + S LL E   G+ +HG+ I+  LGY  +      NSL+  YS+ 
Sbjct: 208 YSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIK--LGYKDISHNSFENSLISLYSQC 265

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL-CSQFSFSTLLA 373
             +  AE+LF  +    D+VSWN+M+ G            L  EM  L C Q    T++ 
Sbjct: 266 RDIQAAEILFKEM-KYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVI 324

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           I+P C     L  G+++H   L+     +    N+L+ MY  C D       ++R  H  
Sbjct: 325 IIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKD-------VKRAEH-- 375

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
                         NGH +EA   F+ + Q  +    S TL+ ++ +C + E    G+S+
Sbjct: 376 --------------NGHSREAQHLFRQLLQSYSQCSLS-TLLAILPSCDSSEFLQFGESI 420

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNKA 552
           H   LK     +    N+L+ MY  C D+ +  ++ ++     ++  WN +++  +QN  
Sbjct: 421 HCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGH 480

Query: 553 EVRALELFRHLEFEP----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              AL+ F  +  +P    + +++ +++SAC  L +L  G  +HG       + +  + +
Sbjct: 481 FWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQN 540

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL+ MY  C               ++  +W+ MISA+  +  G  A+ELF   C+    P
Sbjct: 541 ALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELF---CHIEFEP 597

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
            + +++ +LSAC+  G++  G Q + +++    ++  +     + DM    G+L  A++ 
Sbjct: 598 NEITIVGILSACTQLGVLRHGKQIHGHVIRS-RLQGNSFVSAALEDMYSNCGRLDTAFQI 656

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            ++ P +     W +M+SA   H +   G +  EL  ++ 
Sbjct: 657 FQSSP-ERSVAAWNSMISAFGFHSN---GGKAIELFHEMR 692


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/808 (57%), Positives = 588/808 (72%), Gaps = 36/808 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G LAHLPTSTSLLT YS    F SS  LF E  N+D + WNA++ A +EN+C  + + FF
Sbjct: 121 GALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFF 180

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++    FDSTTLL+IVSA   M    QGR +HC+SIK+GM+ D SL N  V+MYAKC
Sbjct: 181 DKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKC 240

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL+SSEC +  + C D VSWN+IM G L+N +PEK L YF+ M +S E ADNVSL  A+
Sbjct: 241 GDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAI 300

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +AS+ LGELS+G+ +H LGIKLGY+   +VSV NSLIS+YSQC DI+AAE  F  +  KD
Sbjct: 301 SASSSLGELSFGQSVHGLGIKLGYKS--HVSVANSLISLYSQCEDIKAAETLFREIALKD 358

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA+++GFA NGK +E FDLL +MQ +   +PDI T++TL+ LCA+ +L REGR++H
Sbjct: 359 IVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIH 418

Query: 302 GYAIRRLLGYD-LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           GYAIRR +  D ++++NSL+  YSK N + KAELLFN+ A   D VSWN+MISG      
Sbjct: 419 GYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAE-KDTVSWNAMISGYSHNRY 477

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNS--PESLEFGKSIHCWQLKLGFSNNTIGV 406
                 LF EML      S ST+ AIL SCNS    S+ FGKS+HCWQLK GF N+ + +
Sbjct: 478 SEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLI 537

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N LMHMYINCGDL A+FS+L   S  +D + WN +IV C +  HF+EA++TF  M Q+  
Sbjct: 538 NILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQEPP 597

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            + DS+TLV+ +SAC NLEL   GKSLHGL +KS +G DTRVQN+LITMY RCRDI SA 
Sbjct: 598 LNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAK 657

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            VF+     NLC+WNCMISA S N+    ALELF +L+FEPNEI+I+ +LSACTQ+GVLR
Sbjct: 658 VVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQFEPNEITIIGVLSACTQIGVLR 717

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           HGKQ+H HVF    Q+NSFIS+AL+D+YSNC               KS +AW+SMISAYG
Sbjct: 718 HGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESAWNSMISAYG 777

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
           YHGKG +AI+LFHEMC SG R +KS+ +SLLSACSHSGLV++GL +Y  MLE Y V+PET
Sbjct: 778 YHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECMLERYGVQPET 837

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH V +VDMLGRSG+L EAYEF K        GVWGA+LSAC++HG+ K+GK++A+ LF+
Sbjct: 838 EHQVYVVDMLGRSGRLDEAYEFAKGC---DSSGVWGALLSACNYHGELKLGKKIAQYLFQ 894

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           LEP+NVG+YISLSNMYVA G WKDA E+
Sbjct: 895 LEPQNVGHYISLSNMYVAAGSWKDATEL 922



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 197/693 (28%), Positives = 334/693 (48%), Gaps = 56/693 (8%)

Query: 88  CLKQGRVV-----HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
           CLK+ ++V     HC ++K G +A        + +Y+K GD  SS+  F  +   D ++W
Sbjct: 101 CLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAW 160

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N I++  L N      + +F +M  +    D+ +L   V+AS  +     G+ IH + IK
Sbjct: 161 NAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIK 220

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G      +S+ N+L+ MY++CGD+ ++E  +  + CKD VSWN+I+ G   N   E+A 
Sbjct: 221 SGMLVD--ISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKAL 278

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLM 320
                M        D  ++   IS  +    L  G+SVHG  I+  LGY   + + NSL+
Sbjct: 279 CYFKRMSFSEET-ADNVSLCCAISASSSLGELSFGQSVHGLGIK--LGYKSHVSVANSLI 335

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQF--------S 367
             YS+   +  AE LF  IA + D+VSWN+M+ G       KE+  L  Q          
Sbjct: 336 SLYSQCEDIKAAETLFREIA-LKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPD 394

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLL 426
             TL+ +LP C        G++IH + ++    S++ + +N+L+ MY  C +LV    LL
Sbjct: 395 IVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKC-NLVEKAELL 453

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
              +   DT  WN +I   + N + +EA   F  M  +   +  S T+  ++S+C +L +
Sbjct: 454 FNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEML-RWGPNCSSSTVFAILSSCNSLNI 512

Query: 487 --AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCYNCNLCTWNCM 543
                GKS+H   LKS       + N L+ MY  C D+ ++ S + E+    ++ +WN +
Sbjct: 513 NSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTL 572

Query: 544 ISAFSQNKAEVRALELFRHLEFEP----NEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           I    +      ALE F  +  EP    + I++VS LSAC  L +   GK +HG      
Sbjct: 573 IVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSP 632

Query: 600 FQENSFISSALLDMYSNCKS-NAA--------------WSSMISAYGYHGKGWEAIELFH 644
              ++ + ++L+ MY  C+  N+A              W+ MISA  ++ +  EA+ELF 
Sbjct: 633 LGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELF- 691

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
              N    P + ++I +LSAC+  G++  G Q + ++     ++  +     ++D+    
Sbjct: 692 --LNLQFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTC-IQDNSFISAALIDLYSNC 748

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           G+L  A +  ++   +     W +M+SA  +HG
Sbjct: 749 GRLDTALQVFRHAK-EKSESAWNSMISAYGYHG 780


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  917 bits (2370), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/809 (56%), Positives = 585/809 (72%), Gaps = 30/809 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G LA+LPTSTSL T YS    F SS  LF    N+DV+ WNA+I+A +EN+C    + FF
Sbjct: 127 GALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFF 186

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+++  RFDSTTLL++VS L+ +    QGRV+HC+SIK+GM+ D SLCN  +NMYAKC
Sbjct: 187 QKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKC 246

Query: 122 GDLNSS--ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           GD+NSS  EC F  M   D VSWN+IM GCL+N   EK L YFR M +S E+AD+VSLS 
Sbjct: 247 GDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSC 306

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A++A + LGEL++G+ IH  GIKLGY+D+ +VSV NSLIS+YSQC  ++ AE  F  M  
Sbjct: 307 AISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAY 366

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD+VSWNA+++G+A N    EAFDL+ EMQ     +PDI T+ T++ LCA+ +L REGR+
Sbjct: 367 KDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRT 426

Query: 300 VHGYAIRRLLGYD-LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           +HGYAIRR +  D L + N L+D YSK N + KAELLF++ A + DLVSWN+MISG    
Sbjct: 427 IHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQI-DLVSWNAMISGYSQN 485

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LFKE+L      S ST+ AIL SCNS  SL FGKS+H WQLK GF N+T+ V
Sbjct: 486 KYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLV 545

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N+LM MYIN GDL + FS+LQ  S  +D + WN +IV C +   FQEA++TF  M Q  +
Sbjct: 546 NSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPS 605

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            + DS+TLVNV+SA  N+EL  +GKSLH LALKS  G DTRVQN+LITMY RCRDI SA 
Sbjct: 606 FNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSAR 665

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            VF+     NLCTWNCMISA S NK    ALELFRHL+F+PNE +IVS+LSACT++GVL 
Sbjct: 666 KVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQFKPNEFTIVSVLSACTRIGVLI 725

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGY 632
           HGKQ+HG+ F  G+Q+NSFIS+AL+D+YS C              KS +AW+SMI+AYG 
Sbjct: 726 HGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQKSESAWNSMIAAYGN 785

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG G +AIELFHEMC+ GI+ TKS+ +SLLSACSHSGLV++GLQYY  MLE+Y ++PE E
Sbjct: 786 HGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAE 845

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H V +V+ML RSG++ EAY+F K L      GVWG +LS C++HG+ ++GK+VAE LF++
Sbjct: 846 HQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLFEM 905

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
           EP+NVGYYISL+NMYVA G WKDA ++ +
Sbjct: 906 EPQNVGYYISLANMYVAAGSWKDATDLRQ 934



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 203/746 (27%), Positives = 352/746 (47%), Gaps = 64/746 (8%)

Query: 52  RCVVMGLHFFGEMVEEGIRFDSTTLLIIVS----ALTQMNCLKQGRVVHCLSIKAGMIAD 107
           RC  + ++ F +M +           ++V     +L + N      VVHC ++K G +A 
Sbjct: 73  RCFCIAINLFDKMPQRNFHVREVHFDLVVDCIKLSLEKPNIFT-ATVVHCAALKTGALAY 131

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
                    +Y+K GD  SS   F  +H  D ++WN I+S  L N      + +F++M  
Sbjct: 132 LPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIK 191

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
              + D+ +L   V+  + L     G+VIH + IK G      +S+ N+LI+MY++CGD+
Sbjct: 192 DQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVD--ISLCNALINMYAKCGDV 249

Query: 228 EAAERA--FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
            +++    F  M  KDVVSWN+I+ G   NG  E++      M        D  ++   I
Sbjct: 250 NSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEE-RADHVSLSCAI 308

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYD----LLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
           S C+    L  G  +HG  I+  LGY     + + NSL+  YS+  ++  AE +F  +A 
Sbjct: 309 SACSSLGELAFGECIHGQGIK--LGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMA- 365

Query: 342 MNDLVSWNSMISGL---------FKEMLYL----CSQFSFSTLLAILPSCNSPESLEFGK 388
             D+VSWN+M+ G          F  M+ +    C Q    TL  +LP C        G+
Sbjct: 366 YKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGR 425

Query: 389 SIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           +IH + ++     + + + N L+ MY  C ++V    LL   +   D   WN +I   +Q
Sbjct: 426 TIHGYAIRRHMVPDHLPLRNGLIDMYSKC-NVVEKAELLFHSTAQIDLVSWNAMISGYSQ 484

Query: 448 NGHFQEAIKTFKSMT-QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           N ++++A   FK +    QN S  S T+  ++S+C +      GKS+H   LKS     T
Sbjct: 485 NKYYEKAQNLFKELLCCGQNCS--SSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHT 542

Query: 507 RVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE- 564
            + N+L+ MY    D+ S  ++  E+    ++ +WN +I    +      ALE F  +  
Sbjct: 543 LLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQ 602

Query: 565 ---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-N 620
              F  + I++V++LSA   + +L  GK +H       F  ++ + ++L+ MY  C+  N
Sbjct: 603 GPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDIN 662

Query: 621 AA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
           +A              W+ MISA  ++ +  EA+ELF  +     +P + +++S+LSAC+
Sbjct: 663 SARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSACT 719

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
             G++  G Q +      Y  +  +     +VD+    G+L  A +  ++   Q     W
Sbjct: 720 RIGVLIHGKQVHGYTF-RYGYQQNSFISAALVDLYSTCGRLDNAVKVFRH--SQKSESAW 776

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKL 752
            +M++A  +HG+   G++  EL  ++
Sbjct: 777 NSMIAAYGNHGN---GEKAIELFHEM 799


>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 919

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/812 (51%), Positives = 549/812 (67%), Gaps = 52/812 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  L TS+ LLT Y       SSL LF E   KDV+ WN+MIT   +N   +  +  F
Sbjct: 107 GFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLF 166

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ +G  FDSTTLL+ VSAL+ ++  K+  +VHCL+I+ G+++DSSLCN  +N+YAK 
Sbjct: 167 VEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKG 226

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+S+EC F+ M   D VSWNTIM+ CL N YP   L+YF+ M  SG++ADNV+ S  +
Sbjct: 227 EDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVI 286

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A +CL EL  G+ +H L IK GY    +VSV NS+ISMYS+CGDIEAAE  F  + CKD
Sbjct: 287 SACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKD 346

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWNAI++G + NG FEEAF +L EMQ +  ++PDI+TVV++ S+C D  L REGR++H
Sbjct: 347 VISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRAIH 406

Query: 302 GYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           GY +RR +    L ++NS++D Y K    ++AE LF       DLVSWNSMIS       
Sbjct: 407 GYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKT-TTHRDLVSWNSMISAFAQNGF 465

Query: 355 ------LFKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 LF+E++  Y CS+FS ST+LAIL SC+S +SL FGKS+HCW  KL         
Sbjct: 466 TQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL--------- 516

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
                     GDL +AF LL+ I    D + WN VI  C  +GH  E+++ F++M+++  
Sbjct: 517 ----------GDLTSAFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGK 566

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              D +TL+  ISA GNL L  +G+ LHGLA+KSL  LDT++QN LITMYGRC+D +SA 
Sbjct: 567 IRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAV 626

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            VF    + NLC+WNC+ISA SQNKA     +LFR+L+ EPNEI+ V +LSA TQLG   
Sbjct: 627 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTS 686

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           +G Q H H+   GFQ N F+S+AL+DMYS+C               KS +AW+S+ISAYG
Sbjct: 687 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYG 746

Query: 632 YHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           +HG G +A+ELF EM   NSG+ P KS+ ISLLSACSHSG ++EGL+YYN M E++ V+P
Sbjct: 747 FHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKP 806

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
            TEH VCIVDMLGR+GKL+EAYEFI  +    K GVWGA+LSAC++HGDTK+G +VAE+L
Sbjct: 807 VTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQKAGVWGALLSACNYHGDTKLGTEVAEVL 866

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           F++EP+N  YYISL+N YV LG W +AV + K
Sbjct: 867 FEMEPDNASYYISLANTYVGLGGWDEAVRLRK 898



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 179/707 (25%), Positives = 320/707 (45%), Gaps = 77/707 (10%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R +HC ++K G + D +  +  + +Y + GDL SS   F  +   D + WN++++    N
Sbjct: 97  RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQN 156

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYV 211
                 +  F EM   G + D+ +L  AV+A + L       ++H L I+ G   DS   
Sbjct: 157 GRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDS--- 213

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S+ N+L+++Y++  D+ +AE  F  M  +D+VSWN I+     NG    +      M + 
Sbjct: 214 SLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSM-IG 272

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD----LLMMNSLMDFYSKSN 327
              E D  T   +IS C+    L  G S+HG  I+   GY     + + NS++  YSK  
Sbjct: 273 SGQEADNVTFSCVISACSCLEELPLGESLHGLVIKS--GYSPEAHVSVANSIISMYSKCG 330

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS-QFSFSTLLAI 374
            +  AE +F  +    D++SWN++++GL             KEM  +   Q   ST+++I
Sbjct: 331 DIEAAETVFEELL-CKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSI 389

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNS 433
              C        G++IH + ++    +  + V N+++ MY  CG    A  L +  +H  
Sbjct: 390 TSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHR- 448

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKS 492
           D   WN +I A  QNG  QEA   F+ +  +   S  S+ T++ ++++C + +    GKS
Sbjct: 449 DLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKS 508

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNK 551
           +H    K  +G                 D+ SA  + E  +   +L +WN +I   + + 
Sbjct: 509 VHCWLQK--LG-----------------DLTSAFLLLEMIFETRDLTSWNSVIYGCASSG 549

Query: 552 AEVRALELF----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
             + +L  F    R  +   + I+++  +SA   L ++  G+ +HG       + ++ + 
Sbjct: 550 HHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQ 609

Query: 608 SALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           + L+ MY  CK                  +W+ +ISA   +  G E  +LF    N  + 
Sbjct: 610 NTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR---NLKLE 666

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAY 711
           P + + + LLSA +  G    G+Q + +++   +   P       +VDM    G L+   
Sbjct: 667 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGM 724

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           +  +N  ++     W +++SA   HG   MG++  EL  ++   N G
Sbjct: 725 KVFRNSGVK-SISAWNSVISAYGFHG---MGEKAMELFKEMSSGNSG 767



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 189/405 (46%), Gaps = 34/405 (8%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           SF  L  +L S       E  +SIHC+ LK GF  +    + L+ +Y   GDLV++  L 
Sbjct: 76  SFMFLRDVLRSFMMRIETETPRSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLF 135

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D   WN +I    QNG +  A+  F  M  + N   DS TL+  +SA  +L L
Sbjct: 136 GELKEK-DVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGN-EFDSTTLLLAVSALSSLHL 193

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           + +   +H LA+++ +  D+ + NAL+ +Y +  D+ SA  VF    + ++ +WN +++ 
Sbjct: 194 SKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTK 253

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              N     +L  F+ +     E + ++   ++SAC+ L  L  G+ +HG V   G+   
Sbjct: 254 CLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPE 313

Query: 604 SFISSA--LLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           + +S A  ++ MYS                CK   +W+++++    +G   EA  +  EM
Sbjct: 314 AHVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEM 373

Query: 647 CN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDM 700
            +   I+P  S+V+S+ S C    L  EG       +  Y VR E +         ++DM
Sbjct: 374 QSVDKIQPDISTVVSITSICGDFCLSREG-----RAIHGYTVRREMQSRALEVINSVIDM 428

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            G+ G   +A EF+           W +M+SA + +G T+  K +
Sbjct: 429 YGKCGLTTQA-EFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNL 472


>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/811 (50%), Positives = 554/811 (68%), Gaps = 32/811 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L TS+ LLT Y       SS  LF E   KDV+ WN+MITA  +N   +  +  F
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ +G  FDSTTLL+  SAL+ ++  ++  ++HCL+I+ G++ DSSLCN  +N+YAK 
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L+S+EC F+ M   D VSWNTIM+ CL N +P K L YF+ M  SG++AD V+ S  +
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + + EL+ G+ +H L IK GY    +VSV NS+ISMYS+CGD EAAE  F  + C+D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+S NAI++GFA NG FEEAF +L++MQ +  ++PDIATVV++ S+C D    REGR+VH
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416

Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           GY +R  +    L ++NS++D Y K    ++AELLF       DLVSWNSMIS       
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNGF 475

Query: 355 ------LFKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 LFKE++  Y CS+FS ST+LAIL SC+S +SL FGKS+HCW  KLGF +N +  
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSA 535

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N++++MYI C DL +AF  L+ +S   D + WN VI  C  +GH  E+++ F++M+++  
Sbjct: 536 NSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 595

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              D +TL+  ISA GNL L  +G+  HGLA+KSL  LDT++QN LITMYGRC+DI+SA 
Sbjct: 596 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 655

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            VF    + NLC+WNC+ISA SQNKA     +LFR+L+ EPNEI+ V +LSA TQLG   
Sbjct: 656 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTS 715

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           +G Q H H+   GFQ N F+S+AL+DMYS+C                S +AW+S+ISA+G
Sbjct: 716 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 775

Query: 632 YHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           +HG G +A+ELF E+  NS + P KSS ISLLSACSHSG +DEGL YY  M E++ V+P 
Sbjct: 776 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 835

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           TEH V IVDMLGR+GKL+EAYEFI  +    K GVWGA+LSAC++HGDTK+GK+VAE+LF
Sbjct: 836 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 895

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++EP+N  YYISL+N YV LG W++AV + K
Sbjct: 896 EMEPDNASYYISLANTYVGLGGWEEAVRLRK 926



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 183/717 (25%), Positives = 333/717 (46%), Gaps = 63/717 (8%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VHC ++K G++ D +  +  +  Y + G+L SS C F  +   D + WN++++    N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
                 +  F EM   G + D+ +L  A +A + L       ++H L I+ G       S
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS--S 224

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N+L+++Y++  ++ +AE  F  M  +D+VSWN I+     NG   ++      M    
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT-GS 283

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD----LLMMNSLMDFYSKSNS 328
             E D  T   +IS C+    L  G S+HG  I+   GY     + + NS++  YSK   
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKS--GYSPEAHVSVGNSIISMYSKCGD 341

Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF--------SFSTLLAIL 375
              AE +F  +    D++S N+++     +G+F+E   + +Q           +T+++I 
Sbjct: 342 TEAAETVFEELV-CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSD 434
             C        G+++H + +++   +  + V N+++ MY  CG L     LL + + + D
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRD 459

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKSL 493
              WN +I A +QNG   +A   FK +  + + S  S+ T++ ++++C + +    GKS+
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKA 552
           H    K   G +    N++I MY  CRD+ SA    E+     +L +WN +IS  + +  
Sbjct: 520 HCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 579

Query: 553 EVRALELFRHLEFEP----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
            + +L  F+ +  E     + I+++  +SA   LG++  G+  HG       + ++ + +
Sbjct: 580 HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN 639

Query: 609 ALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            L+ MY  CK                  +W+ +ISA   +  G E  +LF    N  + P
Sbjct: 640 TLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR---NLKLEP 696

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYE 712
            + + + LLSA +  G    G+Q + +++   +   P       +VDM    G L+   +
Sbjct: 697 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMK 754

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL------EPENVGYYISL 763
             +N  +      W +++SA   HG   MG++  EL  +L      EP N   +ISL
Sbjct: 755 VFRNSGVN-SISAWNSVISAHGFHG---MGEKAMELFKELSSNSEMEP-NKSSFISL 806



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 186/405 (45%), Gaps = 34/405 (8%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           SF  L  +L S       E  +S+HC+ LK G   +    + L+  Y   G+LV++  L 
Sbjct: 86  SFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLF 145

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D   WN +I A  QNG +  A+  F  M  + N   DS TL+   SA  +L L
Sbjct: 146 DELKEK-DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EFDSTTLLLAASALSSLHL 203

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           + +   LH LA+++ +  D+ + NAL+ +Y +  ++ SA  VF    + ++ +WN +++ 
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263

Query: 547 FSQNKAEVRALELFRHLEFEPNEISIVS---ILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              N    ++L+ F+ +     E   V+   ++SAC+ +  L  G+ +HG V   G+   
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323

Query: 604 SFIS--SALLDMYSNCKSNAAW---------------SSMISAYGYHGKGWEAIELFHEM 646
           + +S  ++++ MYS C    A                +++++ +  +G   EA  + ++M
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383

Query: 647 CN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDM 700
            +   I+P  ++V+S+ S C       EG   +      Y VR E +         ++DM
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHG-----YTVRMEMQSRALEVINSVIDM 438

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            G+ G   +A E +           W +M+SA S +G T   K +
Sbjct: 439 YGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482


>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
 gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
 gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 932

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/811 (49%), Positives = 541/811 (66%), Gaps = 51/811 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L TS+ LLT Y       SS  LF E   KDV+ WN+MITA  +N   +  +  F
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ +G  FDSTTLL+  SAL+ ++  ++  ++HCL+I+ G++ DSSLCN  +N+YAK 
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L+S+EC F+ M   D VSWNTIM+ CL N +P K L YF+ M  SG++AD V+ S  +
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + + EL+ G+ +H L IK GY    +VSV NS+ISMYS+CGD EAAE  F  + C+D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+S NAI++GFA NG FEEAF +L++MQ +  ++PDIATVV++ S+C D    REGR+VH
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416

Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           GY +R  +    L ++NS++D Y K    ++AELLF       DLVSWNSMIS       
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNGF 475

Query: 355 ------LFKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 LFKE++  Y CS+FS ST+LAIL SC+S +SL FGKS+HCW  KL         
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL--------- 526

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
                     GDL +AF  L+ +S   D + WN VI  C  +GH  E+++ F++M+++  
Sbjct: 527 ----------GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 576

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              D +TL+  ISA GNL L  +G+  HGLA+KSL  LDT++QN LITMYGRC+DI+SA 
Sbjct: 577 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 636

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            VF    + NLC+WNC+ISA SQNKA     +LFR+L+ EPNEI+ V +LSA TQLG   
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTS 696

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           +G Q H H+   GFQ N F+S+AL+DMYS+C                S +AW+S+ISA+G
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756

Query: 632 YHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           +HG G +A+ELF E+  NS + P KSS ISLLSACSHSG +DEGL YY  M E++ V+P 
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           TEH V IVDMLGR+GKL+EAYEFI  +    K GVWGA+LSAC++HGDTK+GK+VAE+LF
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++EP+N  YYISL+N YV LG W++AV + K
Sbjct: 877 EMEPDNASYYISLANTYVGLGGWEEAVRLRK 907



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 179/716 (25%), Positives = 323/716 (45%), Gaps = 80/716 (11%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VHC ++K G++ D +  +  +  Y + G+L SS C F  +   D + WN++++    N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
                 +  F EM   G + D+ +L  A +A + L       ++H L I+ G       S
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS--S 224

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N+L+++Y++  ++ +AE  F  M  +D+VSWN I+     NG   ++      M    
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT-GS 283

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD----LLMMNSLMDFYSKSNS 328
             E D  T   +IS C+    L  G S+HG  I+   GY     + + NS++  YSK   
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKS--GYSPEAHVSVGNSIISMYSKCGD 341

Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF--------SFSTLLAIL 375
              AE +F  +    D++S N+++     +G+F+E   + +Q           +T+++I 
Sbjct: 342 TEAAETVFEELV-CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSD 434
             C        G+++H + +++   +  + V N+++ MY  CG L     LL + + + D
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRD 459

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKSL 493
              WN +I A +QNG   +A   FK +  + + S  S+ T++ ++++C + +    GKS+
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H    K  +G  T     L TM    RD+ S               WN +IS  + +   
Sbjct: 520 HCWLQK--LGDLTSAFLRLETM-SETRDLTS---------------WNSVISGCASSGHH 561

Query: 554 VRALELF----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
           + +L  F    R  +   + I+++  +SA   LG++  G+  HG       + ++ + + 
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621

Query: 610 LLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+ MY  CK                  +W+ +ISA   +  G E  +LF    N  + P 
Sbjct: 622 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR---NLKLEPN 678

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
           + + + LLSA +  G    G+Q + +++   +   P       +VDM    G L+   + 
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKV 736

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL------EPENVGYYISL 763
            +N  +      W +++SA   HG   MG++  EL  +L      EP N   +ISL
Sbjct: 737 FRNSGVN-SISAWNSVISAHGFHG---MGEKAMELFKELSSNSEMEP-NKSSFISL 787



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 186/405 (45%), Gaps = 34/405 (8%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           SF  L  +L S       E  +S+HC+ LK G   +    + L+  Y   G+LV++  L 
Sbjct: 86  SFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLF 145

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D   WN +I A  QNG +  A+  F  M  + N   DS TL+   SA  +L L
Sbjct: 146 DELKEK-DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EFDSTTLLLAASALSSLHL 203

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           + +   LH LA+++ +  D+ + NAL+ +Y +  ++ SA  VF    + ++ +WN +++ 
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263

Query: 547 FSQNKAEVRALELFRHLEFEPNEISIVS---ILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              N    ++L+ F+ +     E   V+   ++SAC+ +  L  G+ +HG V   G+   
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323

Query: 604 SFIS--SALLDMYSNCKSNAAW---------------SSMISAYGYHGKGWEAIELFHEM 646
           + +S  ++++ MYS C    A                +++++ +  +G   EA  + ++M
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383

Query: 647 CN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDM 700
            +   I+P  ++V+S+ S C       EG   +      Y VR E +         ++DM
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHG-----YTVRMEMQSRALEVINSVIDM 438

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            G+ G   +A E +           W +M+SA S +G T   K +
Sbjct: 439 YGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/803 (46%), Positives = 517/803 (64%), Gaps = 35/803 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P  TS++TAYS V    S+L +F E    D++ WNA I+A   N      +  F  MV+ 
Sbjct: 99  PVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDV 158

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
              FDST+++I++S  ++   L+ G   H +++K  +  D SL N  ++MYAKCGD  SS
Sbjct: 159 LGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSS 218

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  M   DT SWN+++SG L N   E    YF+EM  S  QAD VSLS  ++A + L
Sbjct: 219 EVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHL 278

Query: 188 GEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            +L S+G+ +H+  IKLGYED+   SV NSLI+ Y + G  EAAE  F   + K++V+WN
Sbjct: 279 KDLFSFGESVHSSVIKLGYEDTTS-SVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWN 337

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G   N +  EA  +  EM+     +PD+AT+VT+IS C D  LL EG+ VHGY I+
Sbjct: 338 AMIKGLVENDRVNEAMCMFQEMR--SKNQPDVATLVTIISACGDRGLLPEGKEVHGYIIK 395

Query: 307 RLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +   Y+   + NSL+D Y K N  S A +LF  + PM DL+SWN+MISG           
Sbjct: 396 KGHIYEECSVGNSLLDLYMKCNDPSTARILFRTM-PMRDLISWNTMISGYSRNDSLGEEA 454

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             +FK +L      + ST++A++PSC  P+ L FGKS+H + LK GF       N+L+HM
Sbjct: 455 KAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHM 514

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI CGD +AAFSLL+ I+  SD   WN  IV C QNG + +A++ F+ M      +PDS+
Sbjct: 515 YICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSI 574

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV+V+S CGNL+L   GKS+H +ALK L+  + RV+NAL+TMY R  D +SA  +F S 
Sbjct: 575 TLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSL 634

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE-FEPNEISIVSILSACTQLGVLRHGKQI 591
              NLC+WNCMIS F+QN   +RAL+ ++ +E FEPNEISIV I+ ACTQLG LR GK I
Sbjct: 635 VGRNLCSWNCMISGFAQNNEGLRALQFYKKMEYFEPNEISIVGIICACTQLGDLRQGKNI 694

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HGHV   G Q N FIS++L+DMYS C               KS A W+SMISA+G+HG G
Sbjct: 695 HGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLG 754

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            ++IE+F +M NSG++ T+S+ I+LLSACSHSGL DEGL+YY+ M+E + + P  EHHVC
Sbjct: 755 LKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVC 814

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VDMLGR+G+LQEA++F+++LP +   GVWGA+LSACS   + KM + VA+ L  LEPEN
Sbjct: 815 VVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPEN 874

Query: 757 VGYYISLSNMYVALGRWKDAVEI 779
            GYY+++SN+Y     W  AV++
Sbjct: 875 SGYYVTMSNLYAYQDMWSGAVQV 897



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 24/217 (11%)

Query: 473 TLVNVISAC--GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           ++V  + AC   + E A    +LH  ALKS   LD  V+ ++IT Y R RD+ SA  VF+
Sbjct: 63  SIVRALGACRGASREEADGVAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFD 122

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGVL 585
                +L  WN  ISA + N     A+ LFR +      F+    S+V +LS  ++   L
Sbjct: 123 EAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFDST--SMVIMLSGASRARSL 180

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
            HG   HG         +  + + L+DMY+ C               +   +W+SM+S  
Sbjct: 181 EHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGS 240

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
            ++G    +   F EM  S  +  + S+  +LSACSH
Sbjct: 241 LFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSH 277



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 6/246 (2%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L    +LLT Y      ES+  +F     +++ +WN MI+   +N   +  L F+ +M 
Sbjct: 607 NLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKM- 665

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            E    +  +++ I+ A TQ+  L+QG+ +H   ++ G+  +  +    V+MY+KCG L+
Sbjct: 666 -EYFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLD 724

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            S   F          WN+++S    +    K +  F +M  SG +A   +  + ++A +
Sbjct: 725 ISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACS 784

Query: 186 CLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             G    G K  H +    G   +P   V   ++ M  + G ++ A +    +  K    
Sbjct: 785 HSGLTDEGLKYYHLMIEHFGIIPTPEHHVC--VVDMLGRAGRLQEAHKFVESLPSKQAHG 842

Query: 245 -WNAII 249
            W A++
Sbjct: 843 VWGALL 848



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 2/159 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  S SL+  YS     + S+ +F  +  K +  WN+MI+A   +   +  +  F
Sbjct: 702 GLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIF 761

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M   G++   +T + ++SA +      +G +  H +    G+I         V+M  +
Sbjct: 762 WKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGR 821

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKC 158
            G L  +      +        W  ++S C   +  + C
Sbjct: 822 AGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMC 860


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/803 (46%), Positives = 515/803 (64%), Gaps = 35/803 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P  TS++TAYS V    S+L +F E    D++ WNA I+A   N      +  F  MV+ 
Sbjct: 99  PVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDV 158

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
               DST+++I++S  ++   L+ G   H +++K  +  D SL N  ++MYAKCGD  SS
Sbjct: 159 LGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSS 218

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  M   DT SWN+++SG L N   E    YF+EM  S  QAD VSLS  ++A + L
Sbjct: 219 EVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHL 278

Query: 188 GEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            +L S+G+ +H+  IKLGYED+   SV NSLI+ Y + G  EAAE  F   + K++V+WN
Sbjct: 279 KDLFSFGESVHSSVIKLGYEDTTS-SVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWN 337

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G   N +  EA  +  EM+     +PD+AT+VT+IS C D  LL EG+ VHGY I+
Sbjct: 338 AMIKGLVENDRVNEAMCMFQEMR--SKNQPDVATLVTIISACGDHGLLPEGKEVHGYIIK 395

Query: 307 RLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +   Y+   + NSL+D Y K N  S A +LF  + PM DL+SWN+MISG           
Sbjct: 396 KGHIYEECSVGNSLLDLYMKCNDPSTARILFRTM-PMRDLISWNTMISGYSRNDSLGEEA 454

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             +FK +L      + ST++A++PSC  P+ L FGKS+H + LK GF       N+L+HM
Sbjct: 455 KAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHM 514

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI CGD +AAFSLL+ I+  SD   WN  IV C QNG + +A++ F+ M      +PDS+
Sbjct: 515 YICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSI 574

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV+V+S CGNL+L   GKS+H +ALK L+  + RV+NAL+TMY R  D +SA  +F S 
Sbjct: 575 TLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSL 634

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE-FEPNEISIVSILSACTQLGVLRHGKQI 591
              NLC+WNCMIS F+QN   +RA + ++ +E FEPNEISIV I+ ACTQLG LR GK I
Sbjct: 635 VGRNLCSWNCMISGFAQNNEGLRAFQFYKKMEDFEPNEISIVGIICACTQLGDLRQGKNI 694

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HGHV   G Q N FIS++L+DMYS C               KS A W+SMISA+G+HG G
Sbjct: 695 HGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLG 754

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            ++IE+F +M NSG++ T+S+ I+LLSACSHSGL DEGL+YY+ M+E + + P  EHHVC
Sbjct: 755 LKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVC 814

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VDMLGR+G+LQEA++F+++LP +   GVWGA+LSACS   + KM + VA+ L  LEPEN
Sbjct: 815 VVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPEN 874

Query: 757 VGYYISLSNMYVALGRWKDAVEI 779
            GYY+++SN+Y     W  AV++
Sbjct: 875 SGYYVTMSNLYAYQDMWSGAVQV 897



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 182/701 (25%), Positives = 317/701 (45%), Gaps = 54/701 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +HC ++K+G + D  +    +  Y++  D+ S+   F      D + WN  +S    N  
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               ++ FR M       D+ S+   ++ ++    L +G   H + +K   +    +S+ 
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTD--LSLW 202

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MY++CGD  ++E  F  M  +D  SWN+++ G   NG  E +     EM +  S 
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEM-VRSSF 261

Query: 275 EPDIATVVTLISLCAD-SLLLREGRSVHGYAIRRLLGYDLL---MMNSLMDFYSKSNSLS 330
           + D  ++  ++S C+    L   G SVH   I+  LGY+     + NSL+ FY +     
Sbjct: 262 QADEVSLSCVLSACSHLKDLFSFGESVHSSVIK--LGYEDTTSSVANSLITFYYELGFPE 319

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSC 378
            AE +F + +  N LV+WN+MI GL            F+EM    +Q   +TL+ I+ +C
Sbjct: 320 AAEEVFLSTSNKN-LVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISAC 377

Query: 379 NSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
                L  GK +H + +K G  +   ++G N+L+ +Y+ C D   A  +L R     D  
Sbjct: 378 GDHGLLPEGKEVHGYIIKKGHIYEECSVG-NSLLDLYMKCNDPSTA-RILFRTMPMRDLI 435

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I   ++N    E  K        +  S    T+V VI +C   +    GKS+H  
Sbjct: 436 SWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSF 495

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVR 555
            LK          N+LI MY  C D  +A ++ ES     ++ +WN  I    QN     
Sbjct: 496 ILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGD 555

Query: 556 ALELFRH----LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           ALE F+     L   P+ I++VS+LS C  L +   GK IH        + N  + +ALL
Sbjct: 556 ALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALL 615

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY                  ++  +W+ MIS +  + +G  A + + +M      P + 
Sbjct: 616 TMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKM--EDFEPNEI 673

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           S++ ++ AC+  G + +G   + +++  + ++        +VDM  + G+L  +    ++
Sbjct: 674 SIVGIICACTQLGDLRQGKNIHGHVV-RFGLQTNVFISASLVDMYSKCGRLDISIRVFES 732

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
              +     W +M+SA   HG   +G +  E+ +K+    V
Sbjct: 733 -SAEKSIACWNSMISAFGFHG---LGLKSIEIFWKMNNSGV 769



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 20/215 (9%)

Query: 473 TLVNVISAC--GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           ++V  + AC   + E A    +LH  ALKS   LD  V+ ++IT Y R RD+ SA  VF+
Sbjct: 63  SIVRALGACRGASREEADGVAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFD 122

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRH 587
                +L  WN  ISA + N     A+ LFR +      I   S+V +LS  ++   L H
Sbjct: 123 EAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEH 182

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G   HG         +  + + L+DMY+ C               +   +W+SM+S   +
Sbjct: 183 GIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLF 242

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
           +G    +   F EM  S  +  + S+  +LSACSH
Sbjct: 243 NGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSH 277



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 6/246 (2%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L    +LLT Y      ES+  +F     +++ +WN MI+   +N   +    F+ +M 
Sbjct: 607 NLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKM- 665

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            E    +  +++ I+ A TQ+  L+QG+ +H   ++ G+  +  +    V+MY+KCG L+
Sbjct: 666 -EDFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLD 724

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            S   F          WN+++S    +    K +  F +M  SG +A   +  + ++A +
Sbjct: 725 ISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACS 784

Query: 186 CLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             G    G K  H +    G   +P   V   ++ M  + G ++ A +    +  K    
Sbjct: 785 HSGLTDEGLKYYHLMIEHFGIIPTPEHHVC--VVDMLGRAGRLQEAHKFVESLPSKQAHG 842

Query: 245 -WNAII 249
            W A++
Sbjct: 843 VWGALL 848



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 2/159 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  S SL+  YS     + S+ +F  +  K +  WN+MI+A   +   +  +  F
Sbjct: 702 GLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIF 761

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M   G++   +T + ++SA +      +G +  H +    G+I         V+M  +
Sbjct: 762 WKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGR 821

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKC 158
            G L  +      +        W  ++S C   +  + C
Sbjct: 822 AGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMC 860


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/783 (45%), Positives = 504/783 (64%), Gaps = 36/783 (4%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F E    DV+ WNA + A   +         F  M  E   FDSTT+++++S  ++   L
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNL 178

Query: 90  KQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           ++G  +H ++ K+ + A      N  V+MYAKCG+  S+E  F  M C DT SWN+++SG
Sbjct: 179 RRGMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISG 238

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SYGKVIHALGIKLGYED 207
            + N   E    YFREM  S  Q D VSLSS ++A + L +L S+G+ +H+  +KLGYED
Sbjct: 239 SIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYED 298

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +   SV NSL++ YS+ G  EAA++ F     +++VSWNA+I G   N +  EA  +L +
Sbjct: 299 TASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQ 358

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKS 326
           M+L    +PD+AT+VT++S CAD  LL EG ++HGY IR+ LL  +  M NSL+D Y K 
Sbjct: 359 MRLEN--QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKC 416

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCSQFSFSTLLA 373
           +  S A LLF  + P  DL+SWN+MISG             +FK +L   S  S +T+LA
Sbjct: 417 DEPSNAGLLFMTM-PRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLA 475

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTI-GVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++PSC+ PE L FGK++H + LK GF+++ +  VNAL+HMY++CGD +AAFSL++RI   
Sbjct: 476 VIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPV 535

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           SD   WN VIV C QN   ++A++ F+ M      +PDS+T+V+V+SACG+L L   GKS
Sbjct: 536 SDIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKS 595

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H + LK L   + RV+N+L+TMY R  D +SA  VF S  + NLC+WNCMIS F+QN  
Sbjct: 596 IHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNK 655

Query: 553 EVRALELFRHLE-FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
             RAL+ ++ +E FEPNEIS+V I+ ACTQLG  R GK IHGHVF      N FIS++L+
Sbjct: 656 GWRALQFYQKMEDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLV 715

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY  C               KS A W+S+ISA+G+HG G ++I+LF +M +SG++ TKS
Sbjct: 716 DMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKS 775

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + I+LLSACSHSGLVDEG +YY  M E++ + P  EHHVCIVDMLGR+G+LQEA++F+++
Sbjct: 776 TFIALLSACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVES 835

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           LP Q   G+WGA+L+ACS   + KMG+ +A+ L  LEP N GYY++ +N+Y     W   
Sbjct: 836 LPSQQTHGIWGALLNACSSRSELKMGESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGV 895

Query: 777 VEI 779
            ++
Sbjct: 896 AQV 898



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 188/726 (25%), Positives = 318/726 (43%), Gaps = 67/726 (9%)

Query: 79  IVSALTQMNCLKQGRV-----VHCLSIKAGMIADSSLCNVFV-------NMYAKCGDLNS 126
           IV ALT       G       +HC ++K+G + D  +    +                 +
Sbjct: 55  IVRALTSAPSSSSGDTACIACLHCAALKSGAVLDPPVRTSLLAAYARAGRGAGAGAGAGA 114

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F      D + WN  +     +   +     FR M     + D+ ++   ++ ++ 
Sbjct: 115 ALALFREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASR 174

Query: 187 LGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
            G L  G  +H +  K  LG      +   N+L+ MY++CG+  +AE  F  M C+D  S
Sbjct: 175 AGNLRRGMELHGMAAKSCLGAH---CLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTS 231

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLREGRSVHGY 303
           WN++I G   NG  E +     EM      +PD  ++ +++S C+    L   G SVH  
Sbjct: 232 WNSVISGSIFNGLAEVSACYFREMSC-SIFQPDEVSLSSVLSACSRLDDLFSFGESVHSC 290

Query: 304 AIRRLLGYDLL----MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
           A++  LGY+      + NSL+ FYS+      A+ +F +    N LVSWN+MI GL +  
Sbjct: 291 AVK--LGYEDTASCSVANSLVTFYSEFGMPEAAKKVFASNLNRN-LVSWNAMIKGLVQNE 347

Query: 358 ---------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-N 407
                      + L +Q   +TL+ I+  C     L  G+++H + ++ G       + N
Sbjct: 348 RVTEALAVLRQMRLENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGN 407

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ +Y+ C D  +   LL       D   WN +I   ++ G  +E  +        + +
Sbjct: 408 SLLDLYLKC-DEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGS 466

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSAS 526
           S    T++ VI +C   E    GK+LH  +LK           NALI MY  C D  +A 
Sbjct: 467 SCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAF 526

Query: 527 TVFESCYNC-NLCTWNCMISAFSQNKAEVRALELFR----HLEFEPNEISIVSILSACTQ 581
           ++ E      ++ +WN +I    QN+    ALE+FR     L   P+ I+IVS+LSAC  
Sbjct: 527 SLIERIIPVSDIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGD 586

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMY---SNCKSNA------------AWSSM 626
           L +L  GK IH  +    F  N  + ++LL MY    + +S              +W+ M
Sbjct: 587 LNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCM 646

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           IS +  + KGW A++ + +M      P + SV+ ++ AC+  G   +G   + ++     
Sbjct: 647 ISGFAQNNKGWRALQFYQKM--EDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSV- 703

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           +         +VDM  + G+L  A    +    +   G W +++SA   HG    G +  
Sbjct: 704 LHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAG-WNSLISAFGFHGH---GMKSI 759

Query: 747 ELLFKL 752
           +L +K+
Sbjct: 760 DLFWKM 765



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 164/580 (28%), Positives = 280/580 (48%), Gaps = 31/580 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + SL+T YS     E++  +F    N+++V+WNAMI   V+N  V   L    +M  E 
Sbjct: 304 VANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN 363

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSS 127
            + D  TL+ IVS       L +G  +H   I+ G++  + S+ N  +++Y KC + +++
Sbjct: 364 -QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNA 422

Query: 128 ECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
              F  M   D +SWNT++SG   +    E+  L F+ +   G      ++ + + + + 
Sbjct: 423 GLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSI 482

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA----ERAFWGMTCKDV 242
             ELS+GK +H+  +K G+  S  VS  N+LI MY  CGD  AA    ER    +   D+
Sbjct: 483 PEELSFGKALHSFSLKCGFTSSG-VSAVNALIHMYMSCGDPLAAFSLIERI---IPVSDI 538

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SWN +I G   N   ++A ++   M    ++ PD  T+V+++S C D  LL  G+S+H 
Sbjct: 539 ISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHC 598

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------F 356
             ++ L   +L + NSL+  Y +      AEL+F ++   N L SWN MISG       +
Sbjct: 599 MILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTN-LCSWNCMISGFAQNNKGW 657

Query: 357 KEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           + + +      F     +++ I+ +C        GKSIH    +    NN     +L+ M
Sbjct: 658 RALQFYQKMEDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDM 717

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A  + +  +  S  + WN +I A   +GH  ++I  F  M      +  S 
Sbjct: 718 YCKCGRLDIAVRVFEASAEKS-IAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKS- 775

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T + ++SAC +  L  EG   + L +    G+    ++   ++ M GR   ++ A    E
Sbjct: 776 TFIALLSACSHSGLVDEGWKYYCL-MSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVE 834

Query: 531 SCYNCNL-CTWNCMISAFSQNKAEVRALE-LFRH-LEFEP 567
           S  +      W  +++A S +++E++  E + +H L  EP
Sbjct: 835 SLPSQQTHGIWGALLNACS-SRSELKMGESIAKHLLHLEP 873



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 5/231 (2%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F ++L    SLLT Y       S+  +FY   + ++ +WN MI+   +N      L F+ 
Sbjct: 605 FASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQ 664

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M  E    +  +++ I+ A TQ+   +QG+ +H    ++ +  +  +    V+MY KCG
Sbjct: 665 KM--EDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCG 722

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F          WN+++S    + +  K +  F +M  SG +A   +  + ++
Sbjct: 723 RLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLS 782

Query: 183 ASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           A +  G +  G K    +  K G   +P   V   ++ M  + G ++ A +
Sbjct: 783 ACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVC--IVDMLGRAGRLQEAHK 831


>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Brachypodium distachyon]
          Length = 924

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/812 (44%), Positives = 501/812 (61%), Gaps = 45/812 (5%)

Query: 8   PTSTSLLTAYSNVSY-----FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           P  TSLL AY+           ++L LF+E  + DV+ WNA+I A      +   +  F 
Sbjct: 99  PVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDVILWNAVIGALTRACRLGDAVALFR 158

Query: 63  EMVEEGIR---FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            M   G+R   FDSTT+++++S  ++   L  G  +H  ++K  +  D +L N  V+MYA
Sbjct: 159 RMA--GVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAAVKRRLDTDMNLWNALVDMYA 216

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG    SE  F  M C DT SWN++  G   N   E    YFREM     QAD V+LSS
Sbjct: 217 KCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSS 276

Query: 180 AVAASA-CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            ++AS+   G  S+G+ +H   +KLGYED+   SV NSLI+ Y + G  E AE+ F  + 
Sbjct: 277 VISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIF 336

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K+ VSWN +I G   N K  EA  +  EM  +   +PD AT+V +I  C D  LL EG+
Sbjct: 337 KKNHVSWNVMIKGLMENEKAGEALAVFREM--LSECQPDFATLVAVILSCGDQGLLCEGK 394

Query: 299 SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           ++HGY  R+ L   +  + NSL+  Y K +    A LLF  + P+ DL+SWN+M+SG   
Sbjct: 395 AIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTM-PIRDLISWNTMLSGYSR 453

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     +F+E+L      + +T+LA++PSC+ PE L FGK++H + LK GF++   
Sbjct: 454 DDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVS 513

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            VNALMHMYI CGD + AF+LL  I   SD   WN  +V C QNG  + A++ F+ M   
Sbjct: 514 VVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSS 573

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
              +PDS+TLV+V+SACG L+L   GKS+H +ALK L+  + RV+NAL+TMY R  D +S
Sbjct: 574 LPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTES 633

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE-FEPNEISIVSILSACTQLG 583
           A  +F S  + NLC+WNCM+S F+QN    RAL+ ++ +E F PNE+  VSI+ ACTQL 
Sbjct: 634 AELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKMEKFVPNEMCTVSIICACTQLR 693

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            +RHGK IHGHV     Q N F+S++L+DMYS C               KS A W+SMIS
Sbjct: 694 DVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIACWNSMIS 753

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           A+G+HG G  +IELF  M +SG++ T+S+ I+LLSACSH+GL DEGL+YYN M E++ + 
Sbjct: 754 AFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSACSHAGLTDEGLKYYNLMSEKFGIT 813

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWGAMLSACSHHGDTKMGKQVAE 747
           P  EHHVCIVDMLGR+G+LQEA++F+++LP   +  GVWGA+LSACS+  + +MG+ +A 
Sbjct: 814 PTPEHHVCIVDMLGRAGRLQEAHKFVESLPKSKEAHGVWGALLSACSNKSELRMGEAIAR 873

Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            L  LEPEN GYY+++SN+Y     W  AV++
Sbjct: 874 QLLCLEPENSGYYVTISNLYAYQDMWGGAVQV 905



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 193/706 (27%), Positives = 317/706 (44%), Gaps = 60/706 (8%)

Query: 79  IVSALTQMNCLKQGRV--VHCLSIKAGMIADSSLCNVFVNMYAKCG-----DLNSSECTF 131
           IV AL + +    G V  +HC ++K+G + D  +    +  YA+C      D  ++   F
Sbjct: 67  IVRALREYDAPLAGSVESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLF 126

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGEL 190
                 D + WN ++            +  FR M G  GE  D+ ++   ++ ++  GEL
Sbjct: 127 HEAEDPDVILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGEL 186

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G  +HA  +K   +    +++ N+L+ MY++CG    +E  FW M C D  SWN++  
Sbjct: 187 DLGMALHAAAVKRRLDTD--MNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTG 244

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL-LLREGRSVHGYAIRRLL 309
           G   NG  E +     EM +  +V+ D  T+ ++IS  + +  L   G SVHG  ++  L
Sbjct: 245 GSTFNGLSEVSACYFREM-IRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVK--L 301

Query: 310 GYDLL----MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
           GY+      + NSL+ FY +      AE +F  I   N  VSWN MI GL          
Sbjct: 302 GYEDTAPCSVANSLITFYFEFGFPEDAEKVFMRIFKKNH-VSWNVMIKGLMENEKAGEAL 360

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNALMH 411
             F+EML  C Q  F+TL+A++ SC     L  GK+IH +  +  L    +++G N+L+ 
Sbjct: 361 AVFREMLSEC-QPDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLG-NSLLG 418

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y+ C D   A +LL R     D   WN ++   +++   +E  +        +  S   
Sbjct: 419 LYMKCDDAYTA-NLLFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTM 477

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T++ VI +C   E    GK++H   LK        V NAL+ MY  C D   A T+  S
Sbjct: 478 TTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGS 537

Query: 532 CYNC-NLCTWNCMISAFSQNKAEVRALELFR----HLEFEPNEISIVSILSACTQLGVLR 586
                ++ +WN  +    QN     ALE F+     L   P+ I++VS+LSAC  L +  
Sbjct: 538 IMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQS 597

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYG 631
            GK IH          N  + +ALL MY                      +W+ M+S + 
Sbjct: 598 LGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFA 657

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +  G  A++ + +M      P +   +S++ AC+    V  G   + ++++  D++   
Sbjct: 658 QNNDGRRALQFYQKM--EKFVPNEMCTVSIICACTQLRDVRHGKSIHGHVVKS-DLQNNV 714

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                +VDM  + G+L  A    ++   +     W +M+SA   HG
Sbjct: 715 FLSASLVDMYSKCGRLDIAVRVFES-STEKSIACWNSMISAFGFHG 759



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 107/233 (45%), Gaps = 5/233 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  + +L    +LLT Y   +  ES+  +FY   ++++ +WN M++   +N      L F
Sbjct: 609 RLLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQF 668

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M  E    +    + I+ A TQ+  ++ G+ +H   +K+ +  +  L    V+MY+K
Sbjct: 669 YQKM--EKFVPNEMCTVSIICACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSK 726

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ +   F          WN+++S    + +  + +  F  M  SG +A   +  + 
Sbjct: 727 CGRLDIAVRVFESSTEKSIACWNSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIAL 786

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           ++A +  G    G K  + +  K G   +P   V   ++ M  + G ++ A +
Sbjct: 787 LSACSHAGLTDEGLKYYNLMSEKFGITPTPEHHVC--IVDMLGRAGRLQEAHK 837


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 261/806 (32%), Positives = 422/806 (52%), Gaps = 40/806 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H  + T L+  YS     + + ++F  T N   + WN+MI A   ++     L  +
Sbjct: 59  GF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MVE+G+  D  T   ++ A T    L++G   H    + G+  D  +    V+MY+K 
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  M   D V+WN +++G   +  P + + +FR M   G +  +VSL +  
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                L  +   + IH    +  +  +    V+N LI +YS+CGD++ A R F  M  +D
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSA----VSNGLIDLYSKCGDVDVARRVFDQMVDQD 293

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSW  ++ G+A NG F E  +L  +M+L  +V  +  + V+     A+++ L +G+ +H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKL-GNVRINKVSAVSAFLAAAETIDLEKGKEIH 352

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           G A+++ +  D+L+   LM  Y+K     KA+ LF  +    DLV+W+++I+ L      
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG-RDLVAWSAIIAALVQTGYP 411

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F+EM     + +  TL++ILP+C     L+ GKSIHC+ +K    ++     AL
Sbjct: 412 EEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTAL 471

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG   AA +   R+S + D   WN +I    Q G    AI  F  + +    +P
Sbjct: 472 VSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGDPYNAIDMFYKL-RLSAINP 529

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D+ T+V V+ AC  L    +G  +HGL +K     D  V+NALI MY +C  + SA  +F
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589

Query: 530 -ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
            ++ +  +  TWN +I+A+ QN     A+  F  +    F PN ++ VS+L A   L   
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           R G   H  +  +GF  N+ + ++L+DMY+ C               K   +W++M+S Y
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY 709

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG G  AI LF  M  S ++    S +S+LSAC H+GLV+EG + +++M ++Y ++P+
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPD 769

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGR+G   E   FIK +P++P  GVWGA+L +C  H + K+G+   + L 
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829

Query: 751 KLEPENVGYYISLSNMYVALGRWKDA 776
           KLEP N  +++ LS++Y   GRW DA
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADA 855



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 203/743 (27%), Positives = 357/743 (48%), Gaps = 47/743 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +     L+  YS +   + +  +F +   +DVV WNAMI    ++      + F
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M   G+   S +LL +   + +++ ++  R +H    +      S++ N  +++Y+K
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSK 275

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD++ +   F  M   D VSW T+M+G  HN    + L  F +M     + + VS  SA
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A+A   +L  GK IH   ++   +    + V   L+ MY++CG+ E A++ FWG+  +
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSD--ILVATPLMVMYAKCGETEKAKQLFWGLQGR 393

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W+AII      G  EEA  L  EMQ  + ++P+  T+++++  CAD  LL+ G+S+
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQ-NQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + ++  +  DL    +L+  Y+K    + A   FN ++   D+V+WNS+I+G      
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGD 511

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F ++          T++ ++P+C     L+ G  IH   +KLGF ++    NA
Sbjct: 512 PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNA 571

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L +A  L  +     D   WN++I A  QNGH +EAI +F  M + +N  
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM-RLENFH 630

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+SVT V+V+ A   L    EG + H   ++     +T V N+LI MY +C  +  +  +
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKL 690

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVL 585
           F    + +  +WN M+S ++ +    RA+ LF   +  + + + +S VS+LSAC   G++
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 750

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G++I    FH           ++ D Y        ++ M+   G  G   E +     
Sbjct: 751 EEGRKI----FH-----------SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKV 795

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML---- 701
           M    + P      +LL +C     V  G    +++++   + P    H  ++  +    
Sbjct: 796 M---PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK---LEPRNPAHFVVLSSIYAQS 849

Query: 702 GRSGKLQEAYEFIKNLPIQPKPG 724
           GR     +A   + +L ++  PG
Sbjct: 850 GRWADAGKARSKMNDLGLKKTPG 872


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/806 (32%), Positives = 421/806 (52%), Gaps = 40/806 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H  + T L+  YS     + + ++F  T N   + WN+MI A   ++     L  +
Sbjct: 59  GF-KHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MVE+G+  D  T   ++ A T    L++G   H    + G+  D  +    V+MY+K 
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  M   D V+WN +++G   +  P + + +FR M   G +  +VSL +  
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                L  +   + IH    +  +  +    V+N LI +YS+CGD++ A R F  M  +D
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSA----VSNGLIDLYSKCGDVDVARRVFDQMVDQD 293

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSW  ++ G+A NG F E  +L  +M+L  +V  +  + V+     A+++ L +G+ +H
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKL-GNVRINKVSAVSAFLAAAETIDLEKGKEIH 352

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           G A+++ +  D+L+   LM  Y+K     KA+ LF  +    DLV+W+++I+ L      
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG-RDLVAWSAIIAALVQTGYP 411

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F+EM     + +  TL++ILP+C     L+ GKSIHC+ +K    ++     AL
Sbjct: 412 EEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTAL 471

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG   AA +   R+S + D   WN +I    Q G    AI  F  + +    +P
Sbjct: 472 VSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGDPYNAIDMFYKL-RLSAINP 529

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D+ T+V V+ AC  L    +G  +HGL +K     D  V+NALI MY +C  + SA  +F
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLF 589

Query: 530 -ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
            ++ +  +  TWN +I+A+ QN     A+  F  +    F PN ++ VS+L A   L   
Sbjct: 590 NKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAF 649

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           R G   H  +  +GF  N+ + ++L+DMY+ C               K   +W++M+S Y
Sbjct: 650 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGY 709

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG G  AI LF  M  S ++    S +S+LSAC H GLV+EG + +++M ++Y ++P+
Sbjct: 710 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPD 769

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGR+G   E   FIK +P++P  GVWGA+L +C  H + K+G+   + L 
Sbjct: 770 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 829

Query: 751 KLEPENVGYYISLSNMYVALGRWKDA 776
           KLEP N  +++ LS++Y   GRW DA
Sbjct: 830 KLEPRNPAHFVVLSSIYAQSGRWADA 855



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 203/743 (27%), Positives = 357/743 (48%), Gaps = 47/743 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +     L+  YS +   + +  +F +   +DVV WNAMI    ++      + F
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M   G+   S +LL +   + +++ ++  R +H    +      S++ N  +++Y+K
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSK 275

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD++ +   F  M   D VSW T+M+G  HN    + L  F +M     + + VS  SA
Sbjct: 276 CGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSA 335

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A+A   +L  GK IH   ++   +    + V   L+ MY++CG+ E A++ FWG+  +
Sbjct: 336 FLAAAETIDLEKGKEIHGCALQQRIDSD--ILVATPLMVMYAKCGETEKAKQLFWGLQGR 393

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W+AII      G  EEA  L  EMQ  + ++P+  T+++++  CAD  LL+ G+S+
Sbjct: 394 DLVAWSAIIAALVQTGYPEEALSLFQEMQ-NQKMKPNRVTLMSILPACADLSLLKLGKSI 452

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + ++  +  DL    +L+  Y+K    + A   FN ++   D+V+WNS+I+G      
Sbjct: 453 HCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGD 511

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F ++          T++ ++P+C     L+ G  IH   +KLGF ++    NA
Sbjct: 512 PYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNA 571

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L +A  L  +     D   WN++I A  QNGH +EAI +F  M + +N  
Sbjct: 572 LIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQM-RLENFH 630

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+SVT V+V+ A   L    EG + H   ++     +T V N+LI MY +C  +  +  +
Sbjct: 631 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKL 690

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVL 585
           F    + +  +WN M+S ++ +    RA+ LF   +  + + + +S VS+LSAC   G++
Sbjct: 691 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLV 750

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G++I    FH           ++ D Y        ++ M+   G  G   E +     
Sbjct: 751 EEGRKI----FH-----------SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKV 795

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML---- 701
           M    + P      +LL +C     V  G    +++++   + P    H  ++  +    
Sbjct: 796 M---PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVK---LEPRNPAHFVVLSSIYAQS 849

Query: 702 GRSGKLQEAYEFIKNLPIQPKPG 724
           GR     +A   + +L ++  PG
Sbjct: 850 GRWADAGKARSKMNDLGLKKTPG 872


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/775 (31%), Positives = 410/775 (52%), Gaps = 41/775 (5%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           DV  W ++++A  +      G+  F +M   G+  D+  +  ++  +  +  + +G V+H
Sbjct: 162 DVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIH 221

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
            L  K G+    ++ N  + +Y++CG +  +   F  MH  D +SWN+ +SG   N + +
Sbjct: 222 GLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHD 281

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG-------YEDSP 209
           + +  F +M   G +  +V++ S + A A LG    GKV+H   +K G        +   
Sbjct: 282 RAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGI 341

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             ++ + L+ MY +CGD+ +A R F  M  K +V  WN I+ G+A   +FEE+  L  +M
Sbjct: 342 DEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQM 401

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
             +  + PD   +  L+         R+G   HGY ++   G    + N+L+ FY+KSN 
Sbjct: 402 HEL-GITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNM 460

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +  A L+F+ + P  D +SWNS+ISG            LF  M     +   +TLL++LP
Sbjct: 461 IDNAVLVFDRM-PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C        G+ +H + +K G    T   NAL+ MY NC D  +   + + ++  +  S
Sbjct: 520 ACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I + T+ G F +     + M       PD   + +V+      E   +GKS+HG 
Sbjct: 580 -WTAMITSYTRAGLFDKVAGLLQEMVLD-GIKPDVFAVTSVLHGFAGDESLKQGKSVHGY 637

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           A+++ M     V NAL+ MY  CR+++ A  VF+   N ++ +WN +I  +S+N     +
Sbjct: 638 AIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANES 697

Query: 557 LELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
             LF    L+F+PN +++  IL A   +  L  G++IH +    GF E+S+ S+AL+DMY
Sbjct: 698 FSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMY 757

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
             C               K+  +W+ MI+ YG HG G +A+ LF +M  SG+ P  +S  
Sbjct: 758 VKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFS 817

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           ++L AC HSGL  EG +++N M +EY + P+ +H+ CIVD+L  +G L+EA+EFI+++PI
Sbjct: 818 AILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPI 877

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +P   +W ++L  C  H D K+ ++VA+ +FKLEPEN GYY+ L+N+Y    RW+
Sbjct: 878 EPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWE 932



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 189/682 (27%), Positives = 306/682 (44%), Gaps = 50/682 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +L+  YS     E ++ +F     +D ++WN+ I+    N      +  F +M  EG
Sbjct: 235 VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG 294

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI---------ADSSLCNVFVNMYA 119
               S T+L ++ A  ++     G+VVH  S+K+G++          D +L +  V MY 
Sbjct: 295 TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           KCGD+ S+   F  M     V  WN IM G       E+ LL F +M   G   D  +LS
Sbjct: 355 KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +    CL     G V H   +KLG+      +V N+LIS Y++   I+ A   F  M 
Sbjct: 415 CLLKCITCLSCARDGLVAHGYLVKLGF--GTQCAVCNALISFYAKSNMIDNAVLVFDRMP 472

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D +SWN++I G   NG   EA +L   M  M+  E D  T+++++  CA S     GR
Sbjct: 473 HQDTISWNSVISGCTSNGLNSEAIELFVRM-WMQGHELDSTTLLSVLPACARSHYWFVGR 531

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            VHGY+++  L  +  + N+L+D YS  +       +F  +A  N +VSW +MI+     
Sbjct: 532 VVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKN-VVSWTAMITSYTRA 590

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                  GL +EM+    +     + ++L      ESL+ GKS+H + ++ G        
Sbjct: 591 GLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NALM MY+NC ++  A  +   ++ N D   WN +I   ++N    E+   F  M  Q  
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVT-NKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-- 707

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             P++VT+  ++ A  ++     G+ +H  AL+     D+   NAL+ MY +C  +  A 
Sbjct: 708 FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVAR 767

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLG 583
            +F+     NL +W  MI+ +  +     A+ LF  +     EP+  S  +IL AC   G
Sbjct: 768 VLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSG 827

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
           +   G +                 +A+   Y        ++ ++    + G   EA E  
Sbjct: 828 LTAEGWKFF---------------NAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFI 872

Query: 644 HEMCNSGIRPTKSSVISLLSAC 665
             M    I P  S  +SLL  C
Sbjct: 873 ESM---PIEPDSSIWVSLLHGC 891



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 203/780 (26%), Positives = 346/780 (44%), Gaps = 89/780 (11%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGM--IADSSLCNVFVNMYAKCGDLNSSECTFSGM-- 134
           +V    +   L+  R  H L ++AG   I  S L    V  Y KCGDL  +   F  M  
Sbjct: 100 VVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPP 158

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
             AD   W ++MS        ++ +  FR+M   G   D  ++S  +   A LG ++ G+
Sbjct: 159 RVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGE 218

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           VIH L  KLG  ++   +V N+LI++YS+CG +E A + F  M  +D +SWN+ I G+  
Sbjct: 219 VIHGLLEKLGLGEA--CAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFS 276

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           NG  + A DL  +M      E    TV++++  CA+      G+ VHGY+++  L +DL 
Sbjct: 277 NGWHDRAVDLFSKM-WSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335

Query: 315 MMNSLMD---------FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
            + S +D          Y K   +  A  +F+A+    ++  WN ++ G  K   +  S 
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395

Query: 366 FSFSTL--LAILPSCNSPESL----------EFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F  +  L I P  ++   L            G   H + +KLGF       NAL+  Y
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFY 455

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
                +  A  +  R+ H  DT  WN VI  CT NG   EAI+ F  M  Q +   DS T
Sbjct: 456 AKSNMIDNAVLVFDRMPHQ-DTISWNSVISGCTSNGLNSEAIELFVRMWMQGH-ELDSTT 513

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L++V+ AC      F G+ +HG ++K+ +  +T + NAL+ MY  C D  S + +F +  
Sbjct: 514 LLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA 573

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             N+ +W  MI+++++     +   L + +  +   P+  ++ S+L        L+ GK 
Sbjct: 574 QKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKS 633

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +HG+    G ++   +++AL++MY NC               K   +W+++I  Y  +  
Sbjct: 634 VHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNF 693

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             E+  LF +M     +P   ++  +L A +    ++ G + +   L    +      + 
Sbjct: 694 ANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNA 752

Query: 696 CIVDMLGRSGKLQEA----------------------------------YEFIKNLPIQP 721
            +VDM  + G L  A                                  +E ++   ++P
Sbjct: 753 -LVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEP 811

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMYVALGRWKDAVE 778
               + A+L AC H G T  G +    +   +K+EP+ + +Y  + ++    G  K+A E
Sbjct: 812 DTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPK-LKHYTCIVDLLSHTGNLKEAFE 870



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 225/461 (48%), Gaps = 26/461 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L++ Y+  +  ++++ +F    ++D ++WN++I+ C  N      +  F
Sbjct: 440 GFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELF 499

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G   DSTTLL ++ A  + +    GRVVH  S+K G+I ++SL N  ++MY+ C
Sbjct: 500 VRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNC 559

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D +S+   F  M   + VSW  +++        +K     +EM   G + D  +++S +
Sbjct: 560 SDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL 619

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A    L  GK +H   I+ G E    + V N+L+ MY  C ++E A   F  +T KD
Sbjct: 620 HGFAGDESLKQGKSVHGYAIRNGMEK--LLPVANALMEMYVNCRNMEEARLVFDHVTNKD 677

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWN +I G++ N    E+F L  +M L    +P+  T+  ++   A    L  GR +H
Sbjct: 678 IISWNTLIGGYSRNNFANESFSLFSDMLL--QFKPNTVTMTCILPAVASISSLERGREIH 735

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+RR    D    N+L+D Y K  +L  A +LF+ +   N L+SW  MI+G       
Sbjct: 736 AYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKN-LISWTIMIAGYGMHGCG 794

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKSIHC-WQLKLGFSNNTI 404
                LF++M     +   ++  AIL +C     + E  +F  ++   ++++    + T 
Sbjct: 795 KDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTC 854

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            V+ L H     G+L  AF  ++ +    D+S W  ++  C
Sbjct: 855 IVDLLSHT----GNLKEAFEFIESMPIEPDSSIWVSLLHGC 891


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/776 (31%), Positives = 405/776 (52%), Gaps = 42/776 (5%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           DV  W ++++A  +       +  F +M   G+  D+  +  ++  ++ +  L +G V+H
Sbjct: 168 DVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIH 227

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
            L  K G+    ++ N  + +Y++CG +  +   F  MH  D +SWN+++ GC  N +  
Sbjct: 228 GLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHG 287

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE---DSPYVSV 213
             +  F +M   G +  +V++ S + A A LG    GK +H   +K G     DS    +
Sbjct: 288 TAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGI 347

Query: 214 TNS-----LISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHE 267
            ++     L+ MY +CGD+ +A R F  M+ K +V  WN I+ G+A  G+FEE+  L  +
Sbjct: 348 DDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQ 407

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M  +  + PD   +  L+         R+G   HGY ++   G    + N+L+ FY+KSN
Sbjct: 408 MHEL-GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSN 466

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A L+FN + P  D +SWNS+ISG            LF  M     +    TLL++L
Sbjct: 467 MIGDAVLVFNRM-PRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVL 525

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           P+C        G+ +H + +K G    T   NAL+ MY NC D  +   + + +   +  
Sbjct: 526 PACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVV 585

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S W  +I +  + G F +     + M       PD   + + + A    E   +GKS+HG
Sbjct: 586 S-WTAMITSYMRAGLFDKVAGLLQEMVLD-GIRPDVFAVTSALHAFAGDESLKQGKSVHG 643

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +++ M     V NAL+ MY +CR+++ A  +F+   N ++ +WN +I  +S+N     
Sbjct: 644 YTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNE 703

Query: 556 ALELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           +  LF    L+F PN +++  IL A   +  L  G++IH +    GF E+S+ S+AL+DM
Sbjct: 704 SFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDM 763

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y  C               K+  +W+ MI+ YG HG G  AI LF +M  SGI P  +S 
Sbjct: 764 YVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASF 823

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
            ++L AC HSGL  EG +++  M +EY + P+ +H+ CIVD+L R+G L+EA EFI+++P
Sbjct: 824 SAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMP 883

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           I+P   +W ++L  C  H + K+ ++VA+ +FKLEPEN GYY+ L+N+Y    RW+
Sbjct: 884 IEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWE 939



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 196/737 (26%), Positives = 330/737 (44%), Gaps = 61/737 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +L+  YS     E +  +F     +D ++WN+MI  C  N      +  F +M  +G
Sbjct: 241 VANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQG 300

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM----------IADSSLCNVFVNMY 118
               S T+L ++ A   +     G+ VH  S+K+G+          I D++L +  V MY
Sbjct: 301 TEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMY 360

Query: 119 AKCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
            KCGD+ S+   F  M     V  WN IM G       E+ L  F +M   G   D  ++
Sbjct: 361 VKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI 420

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           S  +    CL     G V H   +KLG+      +V N+LIS Y++   I  A   F  M
Sbjct: 421 SCLLKCITCLSCARDGLVAHGYIVKLGF--GAQCAVCNALISFYAKSNMIGDAVLVFNRM 478

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D +SWN++I G + NG   EA +L   M   +  E D  T+++++  CA S     G
Sbjct: 479 PRQDTISWNSVISGCSSNGLNSEAIELFIRM-WTQGQELDSVTLLSVLPACAQSRYWFAG 537

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           R VHGY+++  L  +  + N+L+D YS  +       +F ++   N +VSW +MI+    
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKN-VVSWTAMITSYMR 596

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GL +EM+    +     + + L +    ESL+ GKS+H + ++ G       
Sbjct: 597 AGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPV 656

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NALM MY+ C ++  A  +  R++ N D   WN +I   ++N    E+   F  M  Q 
Sbjct: 657 ANALMEMYVKCRNVEEARLIFDRVT-NKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQF 715

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P++VT+  ++ A  ++     G+ +H  AL+     D+   NAL+ MY +C  +  A
Sbjct: 716 R--PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVA 773

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             +F+     NL +W  MI+ +  +     A+ LF  +     EP+  S  +IL AC   
Sbjct: 774 RVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHS 833

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G+   G++     F    Q+   I   L            ++ ++      G   EA+E 
Sbjct: 834 GLAAEGRR-----FFKAMQKEYKIEPKL----------KHYTCIVDLLSRTGDLKEALEF 878

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPE-TEHHVCIVDM 700
              M    I P  S  +SLL  C     + + ++    + ++ + + PE T ++V + ++
Sbjct: 879 IESM---PIEPDSSIWVSLLHGCR----IHKNVKLAEKVADKVFKLEPENTGYYVLLANI 931

Query: 701 LGRSGKLQEAYEFIKNL 717
              +    E +E +K L
Sbjct: 932 YAEA----ERWEAVKKL 944



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 212/798 (26%), Positives = 354/798 (44%), Gaps = 107/798 (13%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-----DSSLCNVFVNMYAKCGDLNS 126
           D  +  ++V    +   L+  +  H L I+A   A      S L    V  Y KCGDL  
Sbjct: 96  DVRSYCMVVQLCGEERSLEAAKRAHAL-IRASSAAATGGKGSVLGKRLVLAYLKCGDLGE 154

Query: 127 SECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           +   F GM    AD   W ++MS        ++ +  FR+M   G   D  ++S  +   
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCV 214

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           + LG L+ G+VIH L  KLG   +   +V N+LI++YS+CG +E A R F  M  +D +S
Sbjct: 215 SSLGSLTEGEVIHGLLEKLGLGQA--CAVANALIAVYSRCGRMEDAARVFDSMHPRDAIS 272

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN++I G   NG    A DL  +M   +  E    TV++++  CA       G++VHGY+
Sbjct: 273 WNSMIGGCFSNGWHGTAVDLFSKM-WSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYS 331

Query: 305 IRRLLGYDLLMMNSLMD----------FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           ++  L + L  + S +D           Y K   ++ A  +F+A++   ++  WN ++ G
Sbjct: 332 VKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGG 391

Query: 355 L-----FKEMLYLCSQFSFSTLLAILPSCNSPESL----------EFGKSIHCWQLKLGF 399
                 F+E L L  Q      L I P  ++   L            G   H + +KLGF
Sbjct: 392 YAKVGEFEESLSLFVQMH---ELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF 448

Query: 400 SNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
                  NAL+  Y      GD V  F+ + R     DT  WN VI  C+ NG   EAI+
Sbjct: 449 GAQCAVCNALISFYAKSNMIGDAVLVFNRMPR----QDTISWNSVISGCSSNGLNSEAIE 504

Query: 457 TFKSM-TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
            F  M TQ Q    DSVTL++V+ AC      F G+ +HG ++K+ +  +T + NAL+ M
Sbjct: 505 LFIRMWTQGQEL--DSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDM 562

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y  C D +S + +F S    N+ +W  MI+++ +     +   L + +  +   P+  ++
Sbjct: 563 YSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAV 622

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            S L A      L+ GK +HG+    G ++   +++AL++MY  C               
Sbjct: 623 TSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTN 682

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K   +W+++I  Y  +    E+  LF +M     RP   ++  +L A +    ++ G + 
Sbjct: 683 KDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREI 741

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA--------------------------- 710
           +   L    +      +  +VDM  + G L  A                           
Sbjct: 742 HAYALRRGFLEDSYASNA-LVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGF 800

Query: 711 -------YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYY 760
                  +E ++   I+P    + A+L AC H G    G++  + +   +K+EP+ + +Y
Sbjct: 801 GKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPK-LKHY 859

Query: 761 ISLSNMYVALGRWKDAVE 778
             + ++    G  K+A+E
Sbjct: 860 TCIVDLLSRTGDLKEALE 877



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 223/475 (46%), Gaps = 22/475 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A      +L++ Y+  +    ++ +F     +D ++WN++I+ C  N      +  F
Sbjct: 447 GFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELF 506

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G   DS TLL ++ A  Q      GRVVH  S+K G+I ++SL N  ++MY+ C
Sbjct: 507 IRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNC 566

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D  S+   F  M   + VSW  +++  +     +K     +EM   G + D  +++SA+
Sbjct: 567 SDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSAL 626

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    L  GK +H   I+ G E    + V N+L+ MY +C ++E A   F  +T KD
Sbjct: 627 HAFAGDESLKQGKSVHGYTIRNGMEK--LLPVANALMEMYVKCRNVEEARLIFDRVTNKD 684

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I G++ N    E+F L  +M L     P+  T+  ++   A    L  GR +H
Sbjct: 685 VISWNTLIGGYSRNNFPNESFSLFSDMLL--QFRPNAVTMTCILPAAASISSLERGREIH 742

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+RR    D    N+L+D Y K  +L  A +LF+ +   N L+SW  MI+G       
Sbjct: 743 AYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKN-LISWTIMIAGYGMHGFG 801

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPS-CNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                LF++M     +   ++  AIL + C+S  + E  +     Q +            
Sbjct: 802 KHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTC 861

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI--KTFK 459
           ++ +    GDL  A   ++ +    D+S W  ++  C   +N    E +  K FK
Sbjct: 862 IVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFK 916


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/804 (31%), Positives = 430/804 (53%), Gaps = 40/804 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  +L   T+L+  Y+       +  +  +    D+VTWNA+I+    N           
Sbjct: 186 FEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLR 245

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           ++ E G++ + +T   I+   T+M CL  G+ +H   +K+G  +D  L    ++MYA  G
Sbjct: 246 QINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGG 305

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           +L  +   F      + V WN+++S    N    +    F++M  +  Q + V+  S + 
Sbjct: 306 NLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIP 365

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                    YGK +HA  +K  Y     +SV  +L+SMY++ GD+ +A+  F+ M  +++
Sbjct: 366 CCENSANFWYGKSLHAHVMK--YRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNL 423

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SWN++I G+  NG +E + D   +MQ     +PD  ++V ++S C+    +  G++ H 
Sbjct: 424 LSWNSMISGYGHNGLWEASMDAFCDMQF-EGFDPDAISIVNILSACSKLEAILLGKAAHA 482

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           ++ R+    +L + N+L+ FYS    LS +  LF  + P+ + +SWN++ISG        
Sbjct: 483 FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKM-PLRNAISWNTLISGCVHNGDTK 541

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               L  +M     +    TL++I+P C   E+L  G ++H + +K GF+ +   VNAL+
Sbjct: 542 KAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALI 601

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY NCGD+ A   L + +   S  S WN +I     +    E + +F  M ++    P+
Sbjct: 602 SMYFNCGDINAGKFLFEVMPWRSIVS-WNALITGYRFHYLQNEVMASFCQMIRE-GQKPN 659

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            VTL+N++ +C  L    +GKS+H  A+++ + ++T +  +LI+MY R  +I S   +FE
Sbjct: 660 YVTLLNLLPSCRTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFE 716

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRH 587
                ++  WN ++S + Q K    ++  F    H   EP+ I+ +S++SAC QL  L  
Sbjct: 717 MGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNL 776

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
              +  +V   GF ++  IS+AL+D+++ C               K   +WS+MI+ YG 
Sbjct: 777 SNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGL 836

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG    A+ L  +M  SG++P   +  S+LSACSH G +D+G   +N+M+EE  V    E
Sbjct: 837 HGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRME 895

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LGR+G+L EAY+F++ LP +P   +  ++L AC  HG+ K+G++++ LLF+L
Sbjct: 896 HYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFEL 955

Query: 753 EPENVGYYISLSNMYVALGRWKDA 776
           +P+N G Y+ L N+Y A GRW DA
Sbjct: 956 DPKNSGSYVMLYNIYAAAGRWMDA 979



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 191/731 (26%), Positives = 351/731 (48%), Gaps = 55/731 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T   ++ A T +  +     VHC+ ++     +  +    V+ YAK G +  +    
Sbjct: 154 DDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVL 213

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V+WN ++SG   N + ++     R++   G + +  + +S +     +  L 
Sbjct: 214 DKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLD 273

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH   +K G+    +  +T +LISMY+  G++  A   F     K+VV WN++I  
Sbjct: 274 IGKSIHGFVVKSGFSSDEF--LTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISA 331

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A N K  EAF +  +M L  +++P++ T V++I  C +S     G+S+H + ++  L  
Sbjct: 332 YAQNQKSSEAFKMFQQM-LKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDS 390

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS-- 369
            L +  +L+  Y+K   L+ A+ +F  + P  +L+SWNSMISG     L+  S  +F   
Sbjct: 391 QLSVATALLSMYAKLGDLNSADFIFYQM-PRRNLLSWNSMISGYGHNGLWEASMDAFCDM 449

Query: 370 ----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     +++ IL +C+  E++  GK+ H +  +  F +N    NAL+  Y +CG L
Sbjct: 450 QFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKL 509

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            ++F L Q++   +  S WN +I  C  NG  ++A+     M QQ+    D VTL+++I 
Sbjct: 510 SSSFKLFQKMPLRNAIS-WNTLISGCVHNGDTKKAVALLHKM-QQEKMELDLVTLISIIP 567

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C   E   +G +LHG A+K+    D  + NALI+MY  C DI +   +FE     ++ +
Sbjct: 568 ICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVS 627

Query: 540 WNCMISAFS----QNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           WN +I+ +     QN+      ++ R  + +PN ++++++L +C     L  GK IH   
Sbjct: 628 WNALITGYRFHYLQNEVMASFCQMIREGQ-KPNYVTLLNLLPSCR---TLLQGKSIHAFA 683

Query: 596 FHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAI 640
              G    + I ++L+ MY+  ++                A W++++S Y       E++
Sbjct: 684 VRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESV 743

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI--- 697
             F E+ ++ + P   + +SL+SAC     ++      +N +  Y ++   + H+ I   
Sbjct: 744 TFFCELLHARVEPDYITFLSLISACVQLSSLN-----LSNSVMAYVIQKGFDKHIVISNA 798

Query: 698 -VDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAE--LLFKLE 753
            +D+  R G +  A +  + L    K  V W  M++    HGD++    +     L  ++
Sbjct: 799 LIDLFARCGNISIAKKIFEGL--SSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMK 856

Query: 754 PENVGYYISLS 764
           P+ + Y   LS
Sbjct: 857 PDGITYASVLS 867



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 184/724 (25%), Positives = 353/724 (48%), Gaps = 45/724 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    + +L++ Y+       +  LF     K+VV WN+MI+A  +N+        F
Sbjct: 286 GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMF 345

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++  ++ +  T + I+           G+ +H   +K  + +  S+    ++MYAK 
Sbjct: 346 QQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKL 405

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDLNS++  F  M   + +SWN+++SG  HN   E  +  F +M + G   D +S+ + +
Sbjct: 406 GDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNIL 465

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + L  +  GK  HA   +  ++ +  ++++N+L++ YS CG + ++ + F  M  ++
Sbjct: 466 SACSKLEAILLGKAAHAFSFRKEFDSN--LNISNALLAFYSDCGKLSSSFKLFQKMPLRN 523

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +SWN +I G   NG  ++A  LLH+MQ    +E D+ T++++I +C  +  L +G ++H
Sbjct: 524 AISWNTLISGCVHNGDTKKAVALLHKMQ-QEKMELDLVTLISIIPICRVAENLIQGMTLH 582

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           GYAI+     D+ ++N+L+  Y     ++  + LF  + P   +VSWN++I+G       
Sbjct: 583 GYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFE-VMPWRSIVSWNALITGYRFHYLQ 641

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M+    + ++ TLL +LPSC    +L  GKSIH + ++ G    T  + +L
Sbjct: 642 NEVMASFCQMIREGQKPNYVTLLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSL 698

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY    + + +F  L  +    D + WN ++    Q  + +E++  F  +   +   P
Sbjct: 699 ISMYARFEN-INSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHAR-VEP 756

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D +T +++ISAC  L       S+    ++        + NALI ++ RC +I  A  +F
Sbjct: 757 DYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIF 816

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
           E   + +  +W+ MI+ +  +     AL L   +     +P+ I+  S+LSAC+  G + 
Sbjct: 817 EGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFID 876

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G  I   +   G                  +    ++ M+   G  G+  EA +   ++
Sbjct: 877 QGWMIFNSMVEEGVP----------------RRMEHYACMVDLLGRTGQLNEAYDFVEKL 920

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
                +P+ S + SLL AC   G V  G +  +++L E D +  +  +V + ++   +G+
Sbjct: 921 ---PCKPSVSLLESLLGACIIHGNVKLG-EKISSLLFELDPK-NSGSYVMLYNIYAAAGR 975

Query: 707 LQEA 710
             +A
Sbjct: 976 WMDA 979



 Score = 39.7 bits (91), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  H+  S +L+  ++       +  +F    +KD V+W+ MI     +      L  
Sbjct: 787 KGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALAL 846

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +M   G++ D  T   ++SA +    + QG ++    ++ G+          V++  +
Sbjct: 847 LSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGR 906

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
            G LN +      + C  +VS   +++  C +H N
Sbjct: 907 TGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGN 941


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/742 (32%), Positives = 403/742 (54%), Gaps = 50/742 (6%)

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV------NMYAKCGDLNSSECTF 131
           +++ A  Q   ++ GR +H +     + A +  CN FV       MY+ CG  + S   F
Sbjct: 3   VLLQACGQRKDIEVGRRLHEM-----VSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVF 57

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGEL 190
             +   +   WN I+S    N   E  +  F E+   +  + DN +L   + A A L +L
Sbjct: 58  DKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDL 117

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G++IH +  K+      +V   N+LI+MY +CG +E A + F  M  +++VSWN+II 
Sbjct: 118 GLGQIIHGMATKMDLVSDVFVG--NALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIIC 175

Query: 251 GFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           GF+ NG  +E+F+   EM +   S  PD+AT+VT++ +CA    + +G +VHG A++  L
Sbjct: 176 GFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGL 235

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-----MLYLCS 364
             +L++ NSL+D YSK   LS+A+LLF+     N +VSWNSMI G  +E       YL  
Sbjct: 236 NEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKN-IVSWNSMIGGYAREEDVCRTFYLLQ 294

Query: 365 QFSFS---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           +             T+L +LP C     L+  K +H +  + G  +N +  NA +  Y  
Sbjct: 295 KMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTR 354

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L ++  +   +   +  S WN ++    QN   ++A+  +  MT      PD  T+ 
Sbjct: 355 CGALCSSERVFDLMDTKT-VSSWNALLCGYAQNSDPRKALDLYLQMTDS-GLDPDWFTIG 412

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +++ AC  ++    G+ +HG AL++ + +D  +  +L+++Y  C    +A  +F+   + 
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN MI+ +SQN     A+ LFR +     +P EI+I+ +  AC+QL  LR GK++H
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 532

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
                    E+ F+SS+++DMY+                 K  A+W+ +I+ YG HG+G 
Sbjct: 533 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGK 592

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EA+ELF +M   G++P   +   +L ACSH+GLV++GL+Y+N ML  +++ P+ EH+ C+
Sbjct: 593 EALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCV 652

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VDMLGR+G++ +A   I+ +P  P   +W ++LS+C  HG+  +G++VA  L +LEPE  
Sbjct: 653 VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP 712

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
             Y+ +SN++   G+W D   +
Sbjct: 713 ENYVLISNLFAGSGKWDDVRRV 734



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 196/738 (26%), Positives = 353/738 (47%), Gaps = 49/738 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EG 68
           +T ++T YS       S  +F +   K++  WNA+++A   N      +  F E++    
Sbjct: 37  NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 96

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            + D+ TL  ++ A   +  L  G+++H ++ K  +++D  + N  + MY KCG +  + 
Sbjct: 97  HKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 156

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAASA 185
             F  M   + VSWN+I+ G   N + ++    FREM   GE++   D  +L + +   A
Sbjct: 157 KVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCA 215

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              ++  G  +H L +KLG  +   + V NSLI MYS+C  +  A+  F     K++VSW
Sbjct: 216 GEEDIEKGMAVHGLAVKLGLNEE--LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSW 273

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N++I G+A        F LL +MQ   + ++ D  T++ ++ +C +   L+  + +HGY+
Sbjct: 274 NSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYS 333

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEM 359
            R  L  + L+ N+ +  Y++  +L  +E +F+ +     + SWN+++ G       ++ 
Sbjct: 334 WRHGLQSNELVANAFIAAYTRCGALCSSERVFD-LMDTKTVSSWNALLCGYAQNSDPRKA 392

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L L  Q + S       T+ ++L +C+  +SL +G+ IH + L+ G + +     +L+ +
Sbjct: 393 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 452

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI CG   AA  L   + H S  S WN++I   +QNG   EAI  F+ M       P  +
Sbjct: 453 YICCGKPFAAQVLFDGMEHRSLVS-WNVMIAGYSQNGLPDEAINLFRQML-SDGIQPYEI 510

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            ++ V  AC  L     GK LH  ALK+ +  D  V +++I MY +   I  +  +F+  
Sbjct: 511 AIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL 570

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGK 589
              ++ +WN +I+ +  +     ALELF     L  +P++ +   IL AC+  G++  G 
Sbjct: 571 REKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGL 630

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +    + +L   E                    ++ ++   G  G+  +A+ L  EM   
Sbjct: 631 EYFNQMLNLHNIEPKL---------------EHYTCVVDMLGRAGRIDDALRLIEEMPGD 675

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
              P      SLLS+C   G +  G +  N +LE    +P  E++V I ++   SGK  +
Sbjct: 676 ---PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP--ENYVLISNLFAGSGKWDD 730

Query: 710 AYEF---IKNLPIQPKPG 724
                  +K++ +Q   G
Sbjct: 731 VRRVRGRMKDIGLQKDAG 748



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 142/602 (23%), Positives = 273/602 (45%), Gaps = 41/602 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  + SL+  YS   +   +  LF +   K++V+WN+MI        V    +  
Sbjct: 234 GLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLL 293

Query: 62  GEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +M  E   ++ D  T+L ++    + + L+  + +H  S + G+ ++  + N F+  Y 
Sbjct: 294 QKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYT 353

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CG L SSE  F  M      SWN ++ G   N+ P K L  + +M  SG   D  ++ S
Sbjct: 354 RCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGS 413

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + +  L YG+ IH   ++ G    P++ +  SL+S+Y  CG   AA+  F GM  
Sbjct: 414 LLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI--SLLSLYICCGKPFAAQVLFDGMEH 471

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + +VSWN +I G++ NG  +EA +L  +M L   ++P    ++ +   C+    LR G+ 
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQM-LSDGIQPYEIAIMCVCGACSQLSALRLGKE 530

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H +A++  L  D+ + +S++D Y+K   +  ++ +F+ +    D+ SWN +I+G     
Sbjct: 531 LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE-KDVASWNVIIAGYGIHG 589

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGV 406
                  LF++ML L  +    T   IL +C+    +E G       L L          
Sbjct: 590 RGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHY 649

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             ++ M    G +  A  L++ +  + D+  W+ ++ +C  +G+     K    + + + 
Sbjct: 650 TCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEP 709

Query: 467 ASPDSVTLV-NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             P++  L+ N+ +  G  +   + + + G           R+++  +     C  I+  
Sbjct: 710 EKPENYVLISNLFAGSGKWD---DVRRVRG-----------RMKDIGLQKDAGCSWIEVG 755

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALEL-FRHLEFEPNEISIVSILSACTQLGV 584
             V       N    + M+    + +   R LE+    + + P+  S++  L    ++G+
Sbjct: 756 GKVH------NFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGI 809

Query: 585 LR 586
           LR
Sbjct: 810 LR 811


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 255/810 (31%), Positives = 407/810 (50%), Gaps = 36/810 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+        SLL+ Y        +  +F     +DVV++N M+    +   V   L  F
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G+M  EGI  D  T + ++ A T  + L +G+ +H L+++ G+ +D  +    V M  +C
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD++S++  F G    D V +N +++    + +  +    +  M   G   +  +  S +
Sbjct: 278 GDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  GK+IH+   + G+  S  V + N+LISMY++CGD+  A   F+ M  +D
Sbjct: 338 NACSTSKALEAGKLIHSHISEDGH--SSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWNAII G+A      EA  L  +MQ    V+P   T + L+S CA+S    +G+ +H
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQ-SEGVKPGRVTFLHLLSACANSSAYADGKMIH 454

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              +R  +  +  + N+LM+ Y +  SL +A+ +F       D++SWNSMI+G       
Sbjct: 455 EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ-ARDVISWNSMIAGHAQHGSY 513

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM     +    T  ++L  C +PE+LE GK IH    + G   +    NAL
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MYI CG L  A ++   + H  D   W  +I  C   G   +AI+ F  M Q +   P
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCADQGEDMKAIELFWQM-QNEGFRP 631

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              T  +++  C +     EGK +    L S   LDT V NALI+ Y +   +  A  VF
Sbjct: 632 VKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVF 691

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
           +   + ++ +WN +I+ ++QN     A+E    ++ +   PN+ S VS+L+AC+    L 
Sbjct: 692 DKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALE 751

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYG 631
            GK++H  +     Q +  + +AL+ MY+ C S                  W++MI+AY 
Sbjct: 752 EGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYA 811

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG   +A+  F+ M   GI+P  S+  S+LSAC+H+GLV EG Q +++M  EY V P  
Sbjct: 812 QHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTI 871

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+V +LGR+ + QEA   I  +P  P   VW  +L AC  HG+  + +  A    K
Sbjct: 872 EHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALK 931

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L   N   YI LSN+Y A GRW D  +I +
Sbjct: 932 LNARNPAVYILLSNVYAAAGRWDDVAKIRR 961



 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 216/739 (29%), Positives = 371/739 (50%), Gaps = 38/739 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F E   +DV++WN++I+   +          F EM   G   +  T + I++A      
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ +H   IKAG   D  + N  ++MY KCGDL  +   F+G+   D VS+NT++  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                Y ++CL  F +M   G   D V+  + + A      L  GK IH L ++ G    
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + V  +L++M  +CGD+++A++AF G   +DVV +NA+I   A +G   EAF+  + M
Sbjct: 264 --IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V  +  T +++++ C+ S  L  G+ +H +        D+ + N+L+  Y++   
Sbjct: 322 R-SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L KA  LF  + P  DL+SWN++I+G            L+K+M     +    T L +L 
Sbjct: 381 LPKARELFYTM-PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +   GK IH   L+ G  +N    NALM+MY  CG L+ A ++ +  +   D  
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEG-TQARDVI 498

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I    Q+G ++ A K F+ M Q +   PD++T  +V+S C N E    GK +HG 
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEM-QNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +S + LD  + NALI MY RC  ++ A  VF S  + ++ +W  MI   +    +++A
Sbjct: 558 ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKA 617

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           +ELF  ++   F P + +  SIL  CT    L  GK++  ++ + G++ ++ + +AL+  
Sbjct: 618 IELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISA 677

Query: 614 YSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS   S                 +W+ +I+ Y  +G G  A+E  ++M    + P K S 
Sbjct: 678 YSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSF 737

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +SLL+ACS    ++EG + +  +++   ++ +      ++ M  + G   EA E   N+ 
Sbjct: 738 VSLLNACSSFSALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKCGSQGEAQEVFDNI- 795

Query: 719 IQPKPGVWGAMLSACSHHG 737
           I+     W AM++A + HG
Sbjct: 796 IEKNVVTWNAMINAYAQHG 814



 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 203/717 (28%), Positives = 352/717 (49%), Gaps = 43/717 (5%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T + ++   T+   L + + +H   ++A +  D  L N+ +NMY KC  +  +   F
Sbjct: 26  ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN+++S      + +K    F EM  +G   + ++  S + A     EL 
Sbjct: 86  KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH+  IK GY+  P   V NSL+SMY +CGD+  A + F G++ +DVVS+N ++  
Sbjct: 146 NGKKIHSQIIKAGYQRDP--RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A     +E   L  +M     + PD  T + L+       +L EG+ +H   +   L  
Sbjct: 204 YAQKAYVKECLGLFGQMS-SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEMLYL 362
           D+ +  +L+    +   +  A+  F   A   D+V +N++I+ L         F++   +
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTAD-RDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 363 CSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            S     + +T L+IL +C++ ++LE GK IH    + G S++    NAL+ MY  CGDL
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L   +    D   WN +I    +     EA++ +K M Q +   P  VT ++++S
Sbjct: 382 PKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM-QSEGVKPGRVTFLHLLS 439

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC N     +GK +H   L+S +  +  + NAL+ MY RC  +  A  VFE     ++ +
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS 499

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN MI+  +Q+ +   A +LF+ +   E EP+ I+  S+LS C     L  GKQIHG + 
Sbjct: 500 WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT 559

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G Q +  + +AL++MY  C               +   +W++MI      G+  +AIE
Sbjct: 560 ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIE 619

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDM 700
           LF +M N G RP KS+  S+L  C+ S  +DEG +    +L   Y++  +T     ++  
Sbjct: 620 LFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYEL--DTGVGNALISA 677

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
             +SG + +A E    +P +     W  +++  + +G   +G+   E  ++++ ++V
Sbjct: 678 YSKSGSMTDAREVFDKMPSRDIVS-WNKIIAGYAQNG---LGQTAVEFAYQMQEQDV 730



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 26/296 (8%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q +    +  T V ++  C    L  E K +H   +++ +G D  + N LI MY +CR +
Sbjct: 19  QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A  VF+     ++ +WN +IS ++Q   + +A +LF  ++   F PN+I+ +SIL+AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
                L +GK+IH  +   G+Q +  + ++LL MY  C               +   +++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +M+  Y       E + LF +M + GI P K + I+LL A +   ++DEG + +   +EE
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258

Query: 685 ---YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
               D+R  T     +V M  R G +  A +  K    +    V+ A+++A + HG
Sbjct: 259 GLNSDIRVGT----ALVTMCVRCGDVDSAKQAFKGTADRDVV-VYNALIAALAQHG 309


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/804 (30%), Positives = 439/804 (54%), Gaps = 39/804 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   T+LL  Y+     + S  +F    ++D+++WNAMI+    N C++      
Sbjct: 172 GHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEAL 231

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M ++G R ++++L+ IVS ++ +     G  +H  ++K+G++ D SL   F++MYA  
Sbjct: 232 KQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAF 291

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+SS   F      + VS N+++S C+ +   EK    FR M   G   + V++ S +
Sbjct: 292 GHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSIL 351

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    +++G+ +H + IK G  +   VSV ++L+SMYS+ GD+++A   F  +T K 
Sbjct: 352 PCCSNFFGINHGESVHGMVIKFGLAEQ--VSVVSALVSMYSKLGDLDSAVFLFSSVTEKS 409

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            + WN++I G+ +N K+      +  MQ+   V+PD  TV+++IS C  +  L  G+S+H
Sbjct: 410 QLLWNSLISGYLVNNKWNMVMGSVRRMQI-EGVDPDALTVISVISKCRHTEDLHVGKSIH 468

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
            YA+R  L  +  +MN+L+  Y+    LS    LF+ +  +  L+SWN++ISG       
Sbjct: 469 AYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTM-EVRTLISWNTIISGFAENGDS 527

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M     QF   TL+A++ S ++ E +  G+S+H   ++ G + +    NAL
Sbjct: 528 VACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANAL 587

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY NCG + A   L   +S + +T  +N ++    +N  F+E +  F  M +  +  P
Sbjct: 588 ITMYTNCGIIQAGEKLFDSLS-SVNTISYNALMTGYRKNNLFEEILPLFYHMIKN-DQKP 645

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + +TL+N++  C +     +GK++H  A+++   L+T +  + I MY R  +++    +F
Sbjct: 646 NIITLLNLLPICHS---QLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLF 702

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
                 N   WN ++SA  Q K    A + FR ++F   + + +++++++SAC+QLG   
Sbjct: 703 CLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKAD 762

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
             + +       GF     + +AL+DM+S C               K + +WS+MI+AY 
Sbjct: 763 LAECVTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYS 822

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG G  A++LF  M +SGI+P   + +S+LSACS SG +++G   + +ML ++ + P  
Sbjct: 823 MHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRM 882

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD+LGR+G L EAY+ +  +P +P   +  ++L AC  HG++K+G+ V ++L +
Sbjct: 883 EHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTE 942

Query: 752 LEPENVGYYISLSNMYVALGRWKD 775
            +  N   Y+ LSN+Y + G+W D
Sbjct: 943 SDHGNPRSYVMLSNIYASAGKWSD 966



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 194/731 (26%), Positives = 352/731 (48%), Gaps = 55/731 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+ T   ++ A   ++CL+ G+ VHC  ++ G   +  +    ++MYAK G ++ S   F
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   D +SWN ++SG   N    +     ++M   G + +  SL   V+  + LG   
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +HA  +K G       S+T + ISMY+  G + ++   F      ++VS N++I  
Sbjct: 261 AGDPLHAFALKSGVLGDE--SLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISV 318

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G +E+AF +   M+  + + P++ TVV+++  C++   +  G SVHG  I+  L  
Sbjct: 319 CMQHGAWEKAFGVFRLMRC-KGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAE 377

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------------KEM 359
            + ++++L+  YSK   L  A  LF+++   + L+ WNS+ISG              + M
Sbjct: 378 QVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLL-WNSLISGYLVNNKWNMVMGSVRRM 436

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T+++++  C   E L  GKSIH + ++     N   +NAL+ MY +CG L
Sbjct: 437 QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQL 496

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
                L   +   +  S WN +I    +NG     ++ F  M +  +   D VTL+ +IS
Sbjct: 497 SICCKLFHTMEVRTLIS-WNTIISGFAENGDSVACLRFFCQM-RLADMQFDLVTLIALIS 554

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           +   +E    G+S+H LA++S   LD  V NALITMY  C  I++   +F+S  + N  +
Sbjct: 555 SLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTIS 614

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC-TQLGVLRHGKQIHGH- 594
           +N +++ + +N      L LF H+   + +PN I+++++L  C +QL     GK +H + 
Sbjct: 615 YNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPICHSQL----QGKTVHSYA 670

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           + +    E S  +SA+  MYS                 ++N  W++++SA     +   A
Sbjct: 671 IRNFSKLETSLFTSAIC-MYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVA 729

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIV 698
            + F ++    ++    ++++L+SACS  G  D         L++ +D      +   ++
Sbjct: 730 FDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLN--ALI 787

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF-----KLE 753
           DM  R G +  A + I ++ ++     W  M++A S HGD   G    +L        ++
Sbjct: 788 DMHSRCGSISFARK-IFDISMEKDSVSWSTMINAYSMHGD---GGSALDLFLMMVSSGIK 843

Query: 754 PENVGYYISLS 764
           P+++ +   LS
Sbjct: 844 PDDITFVSVLS 854



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 175/693 (25%), Positives = 335/693 (48%), Gaps = 54/693 (7%)

Query: 80  VSALTQMNCLKQGRVVHCLS-------IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           V A++++  L+  R   CLS       +   +  D+S+    V  Y   G   S+   F+
Sbjct: 43  VDAVSRL--LRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFA 100

Query: 133 GMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           G +   A+    N  +     + +  + L  +RE+   G  +DN +    + A A +  L
Sbjct: 101 GFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCL 158

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   ++ G+  +  V V  +L+ MY++ G ++ + R F GM  +D++SWNA+I 
Sbjct: 159 RLGKEVHCRVVRTGHGGN--VGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMIS 216

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G++LNG   EA + L +MQ      P+ +++V ++S+ +   +   G  +H +A++  + 
Sbjct: 217 GYSLNGCLLEAAEALKQMQ-QDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVL 275

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKE 358
            D  +  + +  Y+    LS +  LF+  + +++LVS NSMIS            G+F+ 
Sbjct: 276 GDESLTPAFISMYAAFGHLSSSLSLFHQ-SLVDNLVSCNSMISVCMQHGAWEKAFGVFRL 334

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M       +  T+++ILP C++   +  G+S+H   +K G +     V+AL+ MY   GD
Sbjct: 335 MRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGD 394

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L +A  L   ++  S    WN +I     N  +   + + + M Q +   PD++T+++VI
Sbjct: 395 LDSAVFLFSSVTEKSQL-LWNSLISGYLVNNKWNMVMGSVRRM-QIEGVDPDALTVISVI 452

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S C + E    GKS+H  A++S + L+  V NAL+ MY  C  +     +F +     L 
Sbjct: 453 SKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLI 512

Query: 539 TWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN +IS F++N   V  L  F   R  + + + +++++++S+ + +  +  G+ +H   
Sbjct: 513 SWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLA 572

Query: 596 FHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAI 640
              G   +  +++AL+ MY+NC                +  +++++++ Y  +    E +
Sbjct: 573 IRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEIL 632

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF+ M  +  +P   ++++LL  C HS L  +G   ++  +  +  + ET      + M
Sbjct: 633 PLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSYAIRNFS-KLETSLFTSAICM 688

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
             R   L+  +     L  +    VW A+LSAC
Sbjct: 689 YSRFNNLEYCHNLF-CLVGERNNIVWNAILSAC 720



 Score = 39.3 bits (90), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 45/95 (47%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   +    +L+  +S       +  +F  +  KD V+W+ MI A   +      L  
Sbjct: 774 KGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDL 833

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           F  MV  GI+ D  T + ++SA ++   L+QGR +
Sbjct: 834 FLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTL 868


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 242/804 (30%), Positives = 439/804 (54%), Gaps = 39/804 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   T+LL  Y+     + S  +F    ++D+++WNAMI+    N C++      
Sbjct: 172 GHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEAL 231

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M ++G R ++++L+ IVS ++ +     G  +H  ++K+G++ D S+   F++MYA  
Sbjct: 232 KQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAF 291

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+SS   F      + VS N+++S C+ +   EK    FR M   G   + V++ S +
Sbjct: 292 GHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSIL 351

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    +++G+ +H + IK G  +   VSV ++L+SMYS+ GD+++A   F  +T K 
Sbjct: 352 PCCSNFFGINHGESVHGMVIKFGLAEQ--VSVVSALVSMYSKLGDLDSAVFLFSSVTEKS 409

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            + WN++I G+ +N K+      +  MQ+   V+PD  TV+++IS C  +  L  G+S+H
Sbjct: 410 QLLWNSLISGYLVNNKWNMVMGSVRRMQI-EGVDPDALTVISVISKCRHTEDLHVGKSIH 468

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
            YA+R  L  +  +MN+L+  Y+    LS    LF+ +  +  L+SWN++ISG       
Sbjct: 469 AYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTM-EVRTLISWNTIISGFAENGDS 527

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M     QF   TL+A++ S ++ E +  G+S+H   ++ G + +    NAL
Sbjct: 528 VACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANAL 587

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY NCG + A   L   +S + +T  +N ++    +N  F+E +  F  M +  +  P
Sbjct: 588 ITMYTNCGIIQAGEKLFDSLS-SVNTISYNALMTGYRKNNLFKEILPLFYHMIKN-DQKP 645

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + +TL+N++  C +     +GK++H  A+++   L+T +  + I MY R  +++    +F
Sbjct: 646 NIITLLNLLPICHS---QLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLF 702

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
                 N   WN ++SA  Q K    A + FR ++F   + + +++++++SAC+QLG   
Sbjct: 703 CLVGERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKAD 762

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
             + +       GF     + +AL+DM+S C               K + +WS+MI+AY 
Sbjct: 763 LAECVTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYS 822

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG G  A++LF  M ++GI+P   + +S+LSACS SG +++G   + +ML ++ + P  
Sbjct: 823 MHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRM 882

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD+LGR+G L EAY+ +  +P +P   +  ++L AC  HG++K+G+ V ++L +
Sbjct: 883 EHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTE 942

Query: 752 LEPENVGYYISLSNMYVALGRWKD 775
            +  N   Y+ LSN+Y + G+W D
Sbjct: 943 SDHGNPRSYVMLSNIYASAGKWSD 966



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 195/731 (26%), Positives = 352/731 (48%), Gaps = 55/731 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+ T   ++ A   ++CL+ G+ VHC  ++ G   +  +    ++MYAK G ++ S   F
Sbjct: 141 DNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVF 200

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   D +SWN ++SG   N    +     ++M   G + +  SL   V+  + LG   
Sbjct: 201 DGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRD 260

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +HA  +K G       SVT + ISMY+  G + ++   F      ++VS N++I  
Sbjct: 261 AGDPLHAFALKSGVLGDE--SVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISV 318

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G +E+AF +   M+  + + P++ TVV+++  C++   +  G SVHG  I+  L  
Sbjct: 319 CMQHGAWEKAFGVFRLMRC-KGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAE 377

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------------KEM 359
            + ++++L+  YSK   L  A  LF+++   + L+ WNS+ISG              + M
Sbjct: 378 QVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLL-WNSLISGYLVNNKWNMVMGSVRRM 436

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T+++++  C   E L  GKSIH + ++     N   +NAL+ MY +CG L
Sbjct: 437 QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQL 496

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
                L   +   +  S WN +I    +NG     ++ F  M +  +   D VTL+ +IS
Sbjct: 497 SICCKLFHTMEVRTLIS-WNTIISGFAENGDSVACLRFFCQM-RLADMQFDLVTLIALIS 554

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           +   +E    G+S+H LA++S   LD  V NALITMY  C  I++   +F+S  + N  +
Sbjct: 555 SLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTIS 614

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC-TQLGVLRHGKQIHGH- 594
           +N +++ + +N      L LF H+   + +PN I+++++L  C +QL     GK +H + 
Sbjct: 615 YNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPICHSQL----QGKTVHSYA 670

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           + +    E S  +SA+  MYS                 ++N  W++++SA     +   A
Sbjct: 671 IRNFSKLETSLFTSAIC-MYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVA 729

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIV 698
            + F ++    ++    ++++L+SACS  G  D         L++ +D      +   ++
Sbjct: 730 FDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLN--ALI 787

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF-----KLE 753
           DM  R G +  A + I ++ ++     W  M++A S HGD   G    +L        ++
Sbjct: 788 DMHSRCGSISFARK-IFDISMEKDSVSWSTMINAYSMHGD---GGSALDLFLMMVSTGIK 843

Query: 754 PENVGYYISLS 764
           P+++ +   LS
Sbjct: 844 PDDITFVSVLS 854



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 175/693 (25%), Positives = 335/693 (48%), Gaps = 54/693 (7%)

Query: 80  VSALTQMNCLKQGRVVHCLS-------IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           V A++++  L+  R   CLS       +   +  D+S+    V  Y   G   S+   F+
Sbjct: 43  VDAVSRL--LRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFA 100

Query: 133 GMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           G +   A+    N  +     + +  + L  +RE+   G  +DN +    + A A +  L
Sbjct: 101 GFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCL 158

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   ++ G+  +  V V  +L+ MY++ G ++ + R F GM  +D++SWNA+I 
Sbjct: 159 RLGKEVHCRVVRTGHGGN--VGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMIS 216

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G++LNG   EA + L +MQ      P+ +++V ++S+ +   +   G  +H +A++  + 
Sbjct: 217 GYSLNGCLLEAAEALKQMQ-QDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVL 275

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKE 358
            D  +  + +  Y+    LS +  LF+  + +++LVS NSMIS            G+F+ 
Sbjct: 276 GDESVTPAFISMYAAFGHLSSSLSLFHQ-SLVDNLVSCNSMISVCMQHGAWEKAFGVFRL 334

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M       +  T+++ILP C++   +  G+S+H   +K G +     V+AL+ MY   GD
Sbjct: 335 MRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGD 394

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L +A  L   ++  S    WN +I     N  +   + + + M Q +   PD++T+++VI
Sbjct: 395 LDSAVFLFSSVTEKSQL-LWNSLISGYLVNNKWNMVMGSVRRM-QIEGVDPDALTVISVI 452

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S C + E    GKS+H  A++S + L+  V NAL+ MY  C  +     +F +     L 
Sbjct: 453 SKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLI 512

Query: 539 TWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN +IS F++N   V  L  F   R  + + + +++++++S+ + +  +  G+ +H   
Sbjct: 513 SWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLA 572

Query: 596 FHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAI 640
              G   +  +++AL+ MY+NC                +  +++++++ Y  +    E +
Sbjct: 573 IRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEIL 632

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF+ M  +  +P   ++++LL  C HS L  +G   ++  +  +  + ET      + M
Sbjct: 633 PLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSYAIRNFS-KLETSLFTSAICM 688

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
             R   L+  +     L  +    VW A+LSAC
Sbjct: 689 YSRFNNLEYCHNLF-CLVGERNNIVWNAILSAC 720



 Score = 39.3 bits (90), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 45/95 (47%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   +    +L+  +S       +  +F  +  KD V+W+ MI A   +      L  
Sbjct: 774 KGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDL 833

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           F  MV  GI+ D  T + ++SA ++   L+QGR +
Sbjct: 834 FLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTL 868


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 248/806 (30%), Positives = 428/806 (53%), Gaps = 42/806 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  Y+     + +  LF +   ++ V+WN M++  V     + G+ FF +M + GI
Sbjct: 96  TNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGI 155

Query: 70  RFDSTTLLIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  S  +  +V+A  +   + ++G  VH    K+G+++D  +    +++Y   G ++ S 
Sbjct: 156 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 215

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + VSW ++M G      PE+ +  ++ M   G + +  S+S  +++   L 
Sbjct: 216 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLK 275

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           + S G+ I    IK G E    ++V NSLISM+   G+++ A   F  ++ +D +SWN+I
Sbjct: 276 DESLGRQIIGQVIKSGLESK--LAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSI 333

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +  +A NG  EE+  + + M+     E +  TV TL+S+  D    + GR +HG  ++  
Sbjct: 334 VAAYAQNGHIEESSRIFNLMRRFHD-EVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVK-- 390

Query: 309 LGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
           +G+D  + + N+L+  Y+ +    +A+L+F  + P  DL+SWNS+++            G
Sbjct: 391 MGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQM-PTKDLISWNSLMASFVNDGRSLDALG 449

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +   M+      ++ T  + L +C SPE  + G+ +H   +  G  +N I  NAL+ MY 
Sbjct: 450 ILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYG 509

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G +  +  +L ++    D   WN +I    +N    +A+  F+++ + +  S + +T+
Sbjct: 510 KIGGMSTSRRVLLQMPRR-DVVAWNALIGGYAENEDPDKALAAFQTL-RVEGVSANYITV 567

Query: 475 VNVISAC-GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           V+V+SAC    +L   GK LH   + +    D  V+N+LITMY +C D+ S+  +F    
Sbjct: 568 VSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 627

Query: 534 NCNLCTWNCMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           N ++ TWN +++A + +      L+L    R      ++ S    LSA  +L VL  G+Q
Sbjct: 628 NRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQ 687

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +HG    LGF+ + FI +A  DMYS C               +S  +W+ +ISA G HG 
Sbjct: 688 LHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 747

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             E  E FHEM   GI+P   + +SLL+ACSH GLVD+GL YY+ + +++ + P  EH +
Sbjct: 748 FEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCI 807

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++D+LGRSG+L EA  FI  +P++P   VW ++L++C  H D   G++ AE L KLEPE
Sbjct: 808 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPE 867

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
           +   ++  SNM+   GRW+D   + K
Sbjct: 868 DDSVFVLSSNMFATTGRWEDVENVRK 893



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 191/746 (25%), Positives = 348/746 (46%), Gaps = 82/746 (10%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +  +Q+     GR +H L +K G++  S L  N  +NMY K G +  +   F  M   + 
Sbjct: 66  TGFSQITRETTGRALHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNE 124

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SYGKVIHA 198
           VSWNT+MSG +      + + +F++M   G +  +  ++S V A    G +   G  +H 
Sbjct: 125 VSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHG 184

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
              K G     YVS   +++ +Y   G +  + + F  M  ++VVSW +++ G++  G+ 
Sbjct: 185 FVAKSGLLSDVYVS--TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 242

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE---GRSVHGYAIRRLLGYDLLM 315
           EE  D+   M+    VE +  ++  +IS C    LL++   GR + G  I+  L   L +
Sbjct: 243 EEVIDIYKSMR-GEGVECNENSMSLVISSCG---LLKDESLGRQIIGQVIKSGLESKLAV 298

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFKEMLYLC 363
            NSL+  +    ++  A  +FN I+   D +SWNS++            S +F  M    
Sbjct: 299 ENSLISMFGNMGNVDYANYIFNQISE-RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFH 357

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            + + +T+  +L      +  ++G+ IH   +K+GF +     N L+ MY   G    A 
Sbjct: 358 DEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEAD 417

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            + +++    D   WN ++ +   +G   +A+    SM  +   S + VT  + ++AC +
Sbjct: 418 LVFKQMP-TKDLISWNSLMASFVNDGRSLDALGILCSMI-RTGKSVNYVTFTSALAACFS 475

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
            E   +G+ LHGL + S +  +  + NAL++MYG+   + ++  V       ++  WN +
Sbjct: 476 PEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNAL 535

Query: 544 ISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG-VLRHGKQIHGHVFHLG 599
           I  +++N+   +AL  F+ L  E    N I++VS+LSAC   G +L  GK +H ++   G
Sbjct: 536 IGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAG 595

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           F+ +  + ++L+ MY+ C               +S   W+++++A  +HG G E ++L  
Sbjct: 596 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVS 655

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY---------------YNNMLEEYD--- 686
           +M + G+   + S    LSA +   +++EG Q                +N   + Y    
Sbjct: 656 KMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCG 715

Query: 687 --------VRPETEHHV----CIVDMLGRSGKLQEAYE-FIKNLPIQPKPG--VWGAMLS 731
                   + P     +     ++  LGR G  +E  E F + L +  KPG   + ++L+
Sbjct: 716 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLT 775

Query: 732 ACSHHGDTKMGKQVAELL---FKLEP 754
           ACSH G    G    +++   F LEP
Sbjct: 776 ACSHGGLVDQGLAYYDMIAKDFGLEP 801



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 286/591 (48%), Gaps = 30/591 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL++ + N+   + +  +F +   +D ++WN+++ A  +N  +      F
Sbjct: 291 GLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIF 350

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +STT+  ++S L  ++  K GR +H L +K G  +   +CN  + MYA  
Sbjct: 351 NLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 410

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    ++  F  M   D +SWN++M+  +++      L     M  +G+  + V+ +SA+
Sbjct: 411 GRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSAL 470

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA         G+++H L +  G  D+  +   N+L+SMY + G +  + R    M  +D
Sbjct: 471 AACFSPEFFDKGRILHGLVVVSGLFDNQIIG--NALVSMYGKIGGMSTSRRVLLQMPRRD 528

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSV 300
           VV+WNA+I G+A N   ++A      +++   V  +  TVV+++S C     LL  G+ +
Sbjct: 529 VVAWNALIGGYAENEDPDKALAAFQTLRV-EGVSANYITVVSVLSACLVPGDLLERGKPL 587

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y +      D  + NSL+  Y+K   LS ++ LFN +     +++WN++++     G 
Sbjct: 588 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN-RSIITWNAILAANAHHGH 646

Query: 356 FKEMLYLCS----------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            +E+L L S          QFSFS  L+   +      LE G+ +H   +KLGF  +   
Sbjct: 647 GEEVLKLVSKMRSFGLSLDQFSFSEGLS---AAAKLAVLEEGQQLHGLAVKLGFELDCFI 703

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA   MY  CG++     +L   S N     WNI+I A  ++G+F+E  +TF  M  + 
Sbjct: 704 FNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCETFHEML-EM 761

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL--ITMYGRCRDIK 523
              P  VT V++++AC +  L  +G + + +  K   GL+  +++ +  I + GR   + 
Sbjct: 762 GIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDF-GLEPAIEHCICVIDLLGRSGRLA 820

Query: 524 SAST-VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISI 572
            A T + +     N   W  ++++   ++   R  +   +L + EP + S+
Sbjct: 821 EAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSV 871


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 240/804 (29%), Positives = 429/804 (53%), Gaps = 39/804 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   T+LL  Y+   +  +S  +F     KD+++WNAMI+    N  +   +   
Sbjct: 170 GHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEAT 229

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM ++G+R +++TL+ I  A         G  +H  ++K G++ D SL    +++YA  
Sbjct: 230 QEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAAL 289

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+SS   F   H  D VS+N+++S  + +   ++    FR+M  +G   + V++ S +
Sbjct: 290 DDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVL 349

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    ++ G  +H + IK G  +   +SV ++L+SMYS+ G++++A+  F   T K+
Sbjct: 350 PTCSDFFGVNLGDSVHGMVIKFGLAEQ--ISVVSALVSMYSKLGELDSAKHLFDSCTEKN 407

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            + WN+II G+ +N ++  A D   +MQ+  +V PD  TV+ +I  C     LR  +S+H
Sbjct: 408 NLLWNSIISGYLVNNEWNMALDTFCKMQI-ENVAPDATTVIKVIYGCRHIKDLRMAKSIH 466

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+R     +  +MN+L+  Y     LS +  LF  +  +  L+SWN++ISG       
Sbjct: 467 AYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKM-EVRMLISWNTIISGYAEIRDL 525

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +M     QF   TL+ ++ S +  E    G+S+H   +K G + +    N L
Sbjct: 526 EASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTL 585

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY NCG + A   L   +S + +T  +N+++    +N   +E +  F+ M + +   P
Sbjct: 586 ITMYSNCGSVEACQRLFDNLS-SRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQ-EP 643

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + +T++N++  C N +   +GKS+H  A+++   L+T    + I MY R  ++  +  +F
Sbjct: 644 NHITVLNLLPVCQNHQ---QGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLF 700

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
            S    N+  WN ++SA  Q K    A + FR + F   +P+E++++S++SAC QLG   
Sbjct: 701 NSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSD 760

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            G+ +   +   GF     + +AL+DM+S C               K +  WS+MI++Y 
Sbjct: 761 LGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYS 820

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG    A+ +F  M +SG++P   + + +LSACSHSG V++    + ++  ++ + P  
Sbjct: 821 MHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRM 880

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD+LGRSG L EAY+ ++++  +P   +  ++L AC  HG++K+G+ V  LL  
Sbjct: 881 EHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLID 940

Query: 752 LEPENVGYYISLSNMYVALGRWKD 775
            +  N   Y+ LSN+Y ++G+W D
Sbjct: 941 SQHGNPRSYVMLSNIYASVGKWND 964



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 197/726 (27%), Positives = 361/726 (49%), Gaps = 45/726 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+ T   ++ A   ++CL  GR +HC  ++ G   +  +    ++MYAK G + +S   F
Sbjct: 139 DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVF 198

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N    + +   +EM   G +A+  +L     A    G+  
Sbjct: 199 DFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSD 258

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +HA  +K G       S+  +LIS+Y+   D+ ++   F     KD+VS+N++I  
Sbjct: 259 AGGSLHAFALKCGVLGDE--SLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISA 316

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  +GK++E+FD+  +M     + P++ TV++++  C+D   +  G SVHG  I+  L  
Sbjct: 317 YMQHGKWKESFDVFRQMHCA-GLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAE 375

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            + ++++L+  YSK   L  A+ LF++    N+L+ WNS+ISG             F +M
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLL-WNSIISGYLVNNEWNMALDTFCKM 434

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                    +T++ ++  C   + L   KSIH + ++  F  N   +NAL+ MY +CG+L
Sbjct: 435 QIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGEL 494

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +++ L Q++      S WN +I    +    + ++K F  M +Q+    D VTL+ +IS
Sbjct: 495 SSSYKLFQKMEVRMLIS-WNTIISGYAEIRDLEASVKLFFQM-RQEGLQFDVVTLIGLIS 552

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           +    E    G+SLH LA+KS   +D  + N LITMY  C  +++   +F++  + N  +
Sbjct: 553 SISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVS 612

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH-V 595
           +N +++ + +N      L LFR +   E EPN I+++++L  C      + GK +H + +
Sbjct: 613 YNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQN---HQQGKSVHCYAI 669

Query: 596 FHLGFQENSFISSALLDMYS-------NCK--------SNAAWSSMISAYGYHGKGWEAI 640
            +    E SF +SA+  MYS       +CK        +   W++++SA         A 
Sbjct: 670 RNFSTLETSFFTSAIC-MYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAF 728

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           + F +M    ++P + +++SL+SAC+  G  D G +    ++ +            ++DM
Sbjct: 729 DFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLG-ECVTALILQKGFGGTLLVVNALIDM 787

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVG 758
             R G L  A E   +  ++     W AM+++ S HGD +    +  ++    ++P+++ 
Sbjct: 788 HSRCGSLSFARELFDSSVVKDSV-TWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDIT 846

Query: 759 YYISLS 764
           + I LS
Sbjct: 847 FVIILS 852



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 173/685 (25%), Positives = 328/685 (47%), Gaps = 49/685 (7%)

Query: 82  ALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           A   + CL +   +H L   AG IA D+S+    V+ Y   G   S+   F+G +     
Sbjct: 50  ATRSLKCLSK---LHALLAVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPT 106

Query: 141 SWN-TIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            ++  +   C  ++ +  + L  +R +   G  +DN +    + A A +  L  G+ +H 
Sbjct: 107 VYSLNLAVRCFSDHGFHRELLDLYRTLCTFG--SDNFTFPPVIKACAAVSCLPLGREMHC 164

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             ++ G+E +  V V  +L+ MY++ G I A+   F  M  KD++SWNA+I G++LNG  
Sbjct: 165 RVLRTGHEGN--VGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSL 222

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            EA +   EMQ    +  + +T+V +   C  +     G S+H +A++  +  D  +  +
Sbjct: 223 REAVEATQEMQ-QDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPA 281

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF------- 366
           L+  Y+  + LS + +LF+ +  + DLVS+NSMIS     G +KE   +  Q        
Sbjct: 282 LISLYAALDDLSSSRVLFD-LQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGP 340

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +  T++++LP+C+    +  G S+H   +K G +     V+AL+ MY   G+L +A  L 
Sbjct: 341 NLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLF 400

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
              +  ++   WN +I     N  +  A+ TF  M Q +N +PD+ T++ VI  C +++ 
Sbjct: 401 DSCTEKNNL-LWNSIISGYLVNNEWNMALDTFCKM-QIENVAPDATTVIKVIYGCRHIKD 458

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
               KS+H  A+++   L+  V NAL+ MYG C ++ S+  +F+      L +WN +IS 
Sbjct: 459 LRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISG 518

Query: 547 FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH---GKQIHGHVFHLGFQEN 603
           +++ +    +++LF  +  E  +  +V+++   + + V      G+ +H      G   +
Sbjct: 519 YAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMD 578

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             +++ L+ MYSNC               ++  +++ +++ Y  +    E + LF +M  
Sbjct: 579 ISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVK 638

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +   P   +V++LL  C +     +G   +   +  +    ET      + M  R   + 
Sbjct: 639 NEQEPNHITVLNLLPVCQNH---QQGKSVHCYAIRNFSTL-ETSFFTSAICMYSRFNNVD 694

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSAC 733
            + +   ++  +    VW A+LSAC
Sbjct: 695 YSCKLFNSVG-ERNIIVWNAILSAC 718



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 21/241 (8%)

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
           Q   K+F S+T  + A P        + A  +L+   +  +L  LA+   +  DT V  A
Sbjct: 23  QALAKSFASLTPPR-ALPHPDAFPEFLHATRSLKCLSKLHAL--LAVAGAIARDTSVVTA 79

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTW--NCMISAFSQNKAEVRALELFRHL-EFEPN 568
           ++  Y       SA++VF   Y      +  N  +  FS +      L+L+R L  F  +
Sbjct: 80  VVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTLCTFGSD 139

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +   ++ AC  +  L  G+++H  V   G + N  + +ALLDMY+             
Sbjct: 140 NFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFD 199

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               K   +W++MIS Y  +G   EA+E   EM   G+R   S+++ +  AC  +G  D 
Sbjct: 200 FMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDA 259

Query: 674 G 674
           G
Sbjct: 260 G 260



 Score = 46.2 bits (108), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   L    +L+  +S       +  LF  +  KD VTW+AMI +   +      L  
Sbjct: 772 KGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCESALAI 831

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV-HCLSIKAGMIADSSLCNVFVNMYA 119
           F  M++ G++ D  T +II+SA +    ++Q R +   L I  G+          V++  
Sbjct: 832 FSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLG 891

Query: 120 KCGDLNSS 127
           + G L+ +
Sbjct: 892 RSGHLDEA 899


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 246/810 (30%), Positives = 405/810 (50%), Gaps = 36/810 (4%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            G+        SLL  Y       S+  +F     +DVV++N M+    +   V   +  F
Sbjct: 213  GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLF 272

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            G+M  EGI  D  T + ++ A T  + L +G+ +H L++  G+ +D  +      M+ +C
Sbjct: 273  GQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRC 332

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            GD+  ++         D V +N +++    + + E+    + +M   G   +  +  S +
Sbjct: 333  GDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVL 392

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             A +    L  G++IH+   ++G+  S  V + NSLISMY++CGD+  A   F  M  +D
Sbjct: 393  NACSTSKALGAGELIHSHISEVGH--SSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            ++SWNAII G+A      EA  L  +MQ    V+P   T + L+S C +S    +G+ +H
Sbjct: 451  LISWNAIIAGYARREDRGEAMKLYKQMQ-SEGVKPGRVTFLHLLSACTNSSAYSDGKMIH 509

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               +R  +  +  + N+LM+ Y +  S+ +A+ +F       D++SWNSMI+G       
Sbjct: 510  EDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRA-RDIISWNSMIAGHAQHGSY 568

Query: 355  -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 LF EM     +    T  ++L  C +PE+LE G+ IH   ++ G   +    NAL
Sbjct: 569  EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNAL 628

Query: 410  MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            ++MYI CG L  A+ +   + H +  S W  +I      G  ++A + F  M Q     P
Sbjct: 629  INMYIRCGSLQDAYEVFHSLRHRNVMS-WTAMIGGFADQGEDRKAFELFWQM-QNDGFKP 686

Query: 470  DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
               T  +++ AC +     EGK +    L S   LDT V NALI+ Y +   +  A  VF
Sbjct: 687  VKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVF 746

Query: 530  ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLR 586
            +   N ++ +WN MI+ ++QN     AL+    ++ +    N+ S VSIL+AC+    L 
Sbjct: 747  DKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALE 806

Query: 587  HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
             GK++H  +     Q +  + +AL+ MY+ C               K+   W++MI+AY 
Sbjct: 807  EGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYA 866

Query: 632  YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             HG   +A++ F+ M   GI+P  S+  S+LSAC+HSGLV EG + ++++  ++ + P  
Sbjct: 867  QHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTI 926

Query: 692  EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            EH+ C+V +LGR+G+ QEA   I  +P  P   VW  +L AC  HG+  + +  A    K
Sbjct: 927  EHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALK 986

Query: 752  LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            L   N   Y+ LSN+Y A GRW D  +I +
Sbjct: 987  LNARNPAVYVLLSNVYAAAGRWDDVAKIRR 1016



 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 217/758 (28%), Positives = 373/758 (49%), Gaps = 38/758 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S  L+  Y        +  +F +   +DV++WN++I+   +          F EM   G 
Sbjct: 120 SNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGF 179

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
                T + I++A      L+ G+ +H   I+AG   D  + N  +NMY KC DL S+  
Sbjct: 180 IPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQ 239

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            FSG++  D VS+NT++       Y E+C+  F +M   G   D V+  + + A      
Sbjct: 240 VFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSM 299

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK IH L +  G      + V  +L +M+ +CGD+  A++A      +DVV +NA+I
Sbjct: 300 LDEGKRIHKLAVNEGLNSD--IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALI 357

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
              A +G +EEAF+  ++M+    V  +  T +++++ C+ S  L  G  +H +      
Sbjct: 358 AALAQHGHYEEAFEQYYQMR-SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH 416

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+ + NSL+  Y++   L +A  LFN + P  DL+SWN++I+G            L+K
Sbjct: 417 SSDVQIGNSLISMYARCGDLPRARELFNTM-PKRDLISWNAIIAGYARREDRGEAMKLYK 475

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M     +    T L +L +C +  +   GK IH   L+ G  +N    NALM+MY  CG
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            ++ A ++ +  +   D   WN +I    Q+G ++ A K F  M +++   PD +T  +V
Sbjct: 536 SIMEAQNVFEG-TRARDIISWNSMIAGHAQHGSYEAAYKLFLEM-KKEGLEPDKITFASV 593

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C N E    G+ +H L ++S + LD  + NALI MY RC  ++ A  VF S  + N+
Sbjct: 594 LVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNV 653

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  MI  F+    + +A ELF  ++   F+P + +  SIL AC     L  GK++  H
Sbjct: 654 MSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAH 713

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEA 639
           + + G++ ++ + +AL+  YS   S                 +W+ MI+ Y  +G G  A
Sbjct: 714 ILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTA 773

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++  ++M   G+   K S +S+L+ACS    ++EG + +  +++   ++ +      ++ 
Sbjct: 774 LQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR-KMQGDVRVGAALIS 832

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           M  + G L+EA E   N   +     W AM++A + HG
Sbjct: 833 MYAKCGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQHG 869



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 196/710 (27%), Positives = 350/710 (49%), Gaps = 43/710 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +V   T+   L + + +H   ++AG+  D  L N+ +NMY KC  ++ +   F  M   D
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            +SWN+++S      + +K    F EM  +G     ++  S + A     EL YGK IH+
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             I+ GY+  P   V NSL++MY +C D+ +A + F G+  +DVVS+N ++  +A     
Sbjct: 208 KIIEAGYQRDP--RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           EE   L  +M     + PD  T + L+       +L EG+ +H  A+   L  D+ +  +
Sbjct: 266 EECIGLFGQMS-SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTA 324

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEMLYLCSQ---F 366
           L   + +   ++ A+    A A   D+V +N++I+ L         F++   + S     
Sbjct: 325 LATMFVRCGDVAGAKQALEAFAD-RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           + +T L++L +C++ ++L  G+ IH    ++G S++    N+L+ MY  CGDL  A  L 
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELF 443

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D   WN +I    +     EA+K +K M Q +   P  VT ++++SAC N   
Sbjct: 444 NTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQM-QSEGVKPGRVTFLHLLSACTNSSA 501

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             +GK +H   L+S +  +  + NAL+ MY RC  I  A  VFE     ++ +WN MI+ 
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            +Q+ +   A +LF  ++    EP++I+  S+L  C     L  G+QIH  +   G Q +
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + +AL++MY  C               ++  +W++MI  +   G+  +A ELF +M N
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKL 707
            G +P KS+  S+L AC  S  +DEG +   ++L   Y++  +T     ++    +SG +
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL--DTGVGNALISAYSKSGSM 739

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            +A +    +P +     W  M++  + +G   +G    +  ++++ + V
Sbjct: 740 TDARKVFDKMPNRDIMS-WNKMIAGYAQNG---LGGTALQFAYQMQEQGV 785



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 143/296 (48%), Gaps = 26/296 (8%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q +    +    V+++  C       E K +H   +++ +G D  + N LI MY +CR +
Sbjct: 74  QPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 133

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A  VF      ++ +WN +IS ++Q   + +A +LF  ++   F P++I+ +SIL+AC
Sbjct: 134 SDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC 193

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
                L +GK+IH  +   G+Q +  + ++LL+MY  C               +   +++
Sbjct: 194 CSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYN 253

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +M+  Y       E I LF +M + GI P K + I+LL A +   ++DEG + +   + E
Sbjct: 254 TMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE 313

Query: 685 ---YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
               D+R  T     +  M  R G +  A + ++    +    V+ A+++A + HG
Sbjct: 314 GLNSDIRVGT----ALATMFVRCGDVAGAKQALEAFADRDVV-VYNALIAALAQHG 364


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 232/756 (30%), Positives = 398/756 (52%), Gaps = 33/756 (4%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT- 84
           ++ +F E   + +  WN +    +  R +      F  M+ + + FD     +++   + 
Sbjct: 116 AVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSG 175

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
                +    +H  +I +G  + + +CN  +++Y K G L+S++  F  +   D+VSW  
Sbjct: 176 NAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVA 235

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC--LGELSYGKVIHALGIK 202
           ++SG   N Y E+ +L F +                +  SAC  +    +GK +H L +K
Sbjct: 236 MISGLSQNGYEEEAMLLFCQ----------------IVLSACTKVEFFEFGKQLHGLVLK 279

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G+    YV   N+L+++YS+ G++ +AE+ F  M+ +D VS+N++I G A  G    A 
Sbjct: 280 QGFSSETYV--CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRAL 337

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L  +M L    +PD  TV +L+S CA    L  G+  H YAI+  +  D+++  SL+D 
Sbjct: 338 ALFKKMNL-DCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           Y K + +  A   F     +++L     + + +  E + + +QF++ +   IL +C +  
Sbjct: 397 YVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGI-VPNQFTYPS---ILKTCTTLG 452

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           + + G+ IH   LK GF  N    + L+ MY   G L  A  + +R+  N D   W  +I
Sbjct: 453 ATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKEN-DVVSWTAMI 511

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
              TQ+  F EA+  FK M Q Q    D++   + ISAC  ++   +G+ +H  +  S  
Sbjct: 512 AGYTQHDKFTEALNLFKEM-QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGY 570

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  + NAL+++Y RC  ++ A   F+  Y  +  +WN ++S F+Q+     AL +F  
Sbjct: 571 SDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQ 630

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           +     E N  +  S +SA   +  +R GKQIHG +   G+   + +S+AL+ +Y+ C +
Sbjct: 631 MNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGT 690

Query: 620 --NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
             + +W+SMI+ Y  HG G+EA++LF +M    + P   + + +LSACSH GLVDEG+ Y
Sbjct: 691 IDDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISY 750

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + +M E +++ P+ EH+ C+VD+LGRSG L  A  F++ +PIQP   VW  +LSAC+ H 
Sbjct: 751 FRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHK 810

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +  +G+  A  L +LEP++   Y+ +SNMY   G+W
Sbjct: 811 NIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKW 846



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 187/742 (25%), Positives = 338/742 (45%), Gaps = 88/742 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +       L+  Y    +  S+  +F     +D V+W AMI+   +N      +  F
Sbjct: 194 GFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLF 253

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +              I++SA T++   + G+ +H L +K G  +++ +CN  V +Y++ 
Sbjct: 254 CQ--------------IVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRS 299

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+S+E  F  M   D VS+N+++SG     Y  + L  F++M    ++ D V+++S +
Sbjct: 300 GNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLL 359

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +G L  GK  H+  IK G      + V  SL+ +Y +C DI+ A   F      D
Sbjct: 360 SACASVGALPNGKQFHSYAIKAGMTSD--IVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD 417

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
                             ++F +  +MQ+   + P+  T  +++  C        G  +H
Sbjct: 418 ---------------NLNKSFQIFTQMQI-EGIVPNQFTYPSILKTCTTLGATDLGEQIH 461

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++    +++ + + L+D Y+K   L  A  +F  +   ND+VSW +MI+G       
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE-NDVVSWTAMIAGYTQHDKF 520

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LFKEM     +       + + +C   ++L+ G+ IH      G+S++    NAL
Sbjct: 521 TEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNAL 580

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  CG +  A++   +I +  D   WN ++    Q+G+F+EA+  F  M  +     
Sbjct: 581 VSLYARCGKVREAYAAFDQI-YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMN-KAGLEI 638

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +S T  + +SA  N+     GK +HG+  K+    +T V NALIT+Y +C  I   S   
Sbjct: 639 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDIS--- 695

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
                     WN MI+ +SQ+     AL+LF   + L+  PN ++ V +LSAC+ +G++ 
Sbjct: 696 ----------WNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVD 745

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G               S+  S + + ++       ++ ++   G  G    A     EM
Sbjct: 746 EGI--------------SYFRS-MSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEM 790

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSG 705
               I+P      +LLSAC+    +D G    +++LE   + P ++  +V + +M   SG
Sbjct: 791 ---PIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLE---LEPKDSATYVLVSNMYAVSG 844

Query: 706 K---LQEAYEFIKNLPIQPKPG 724
           K        + +K+  ++ +PG
Sbjct: 845 KWDCRDRTRQMMKDRGVKKEPG 866



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 241/507 (47%), Gaps = 52/507 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +      +L+T YS      S+  +F+    +D V++N++I+   +   +   L  
Sbjct: 280 QGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALAL 339

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  +  + D  T+  ++SA   +  L  G+  H  +IKAGM +D  +    +++Y K
Sbjct: 340 FKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK 399

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C D+ ++   F             +  G L N    K    F +M   G   +  +  S 
Sbjct: 400 CSDIKTAHEFF-------------LCYGQLDN--LNKSFQIFTQMQIEGIVPNQFTYPSI 444

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     LG    G+ IH   +K G++ + YVS  + LI MY++ G ++ A + F  +   
Sbjct: 445 LKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLKEN 502

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW A+I G+  + KF EA +L  EMQ  + ++ D     + IS CA    L +GR +
Sbjct: 503 DVVSWTAMIAGYTQHDKFTEALNLFKEMQ-DQGIKSDNIGFASAISACAGIQALDQGRQI 561

Query: 301 HGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           H  +   L GY  DL + N+L+  Y++   + +A   F+ I    D VSWNS++SG    
Sbjct: 562 HAQSC--LSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYA-KDNVSWNSLVSGFAQS 618

Query: 356 --FKEMLYLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
             F+E L + +Q         SF+   A+  + N   ++  GK IH    K G+ + T  
Sbjct: 619 GYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIA-NVRIGKQIHGMIRKTGYDSETEV 677

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NAL+ +Y  CG +              D   WN +I   +Q+G   EA+K F+ M +Q 
Sbjct: 678 SNALITLYAKCGTI--------------DDISWNSMITGYSQHGCGFEALKLFEDM-KQL 722

Query: 466 NASPDSVTLVNVISACGNLELAFEGKS 492
           +  P+ VT V V+SAC ++ L  EG S
Sbjct: 723 DVLPNHVTFVGVLSACSHVGLVDEGIS 749


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 246/795 (30%), Positives = 409/795 (51%), Gaps = 37/795 (4%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS       +  +F     ++  +WN M++  V     V  + FF ++   GI+     +
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61

Query: 77  LIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
             +V+A  + + + K+G   H  +IK G+I D  +   FV+ YA  G +++++  F+ M 
Sbjct: 62  ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + VSW ++M     N   ++ +  ++ M   G   +  +++  +++   L ++  G  
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +    +K G E    VS  NSLI M+  CGDI  A   F  M  +D +SWN+II   A N
Sbjct: 182 LLGHALKFGLETK--VSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
              EE+F   H M+L+   E +  T+  L+S+C     L+ G+ VHG A++  L  ++ +
Sbjct: 240 TLHEESFRYFHWMRLVHE-EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLC 363
            N+L+  YS +     AEL+F  + P  DL+SWNSM++             +F EML++ 
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRM-PERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            + ++ T  + L +C  PE    GK +H + + LG  +  I  N L+  Y  C  +  A 
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            + QR+    D   WN +I     N    EA+  FK M +   +  D +T+VN++ +C  
Sbjct: 418 KVFQRMP-KLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLT 476

Query: 484 LE-LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            E L   G  +H   + +   LD  VQ++LITMY +C D+ S+S +F+         WN 
Sbjct: 477 HEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNA 536

Query: 543 MISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +I+A ++      AL+L    R    E ++ +  + LS    L +L  G+Q+HG    LG
Sbjct: 537 IIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLG 596

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           F+ + FI +A +DMY  C               +S  +W+++IS    HG+  +A E FH
Sbjct: 597 FELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFH 656

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           +M   G++P   S + LLSACSH GLVDEGL YY +M   Y ++P  EH VC++D+LGRS
Sbjct: 657 DMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRS 716

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G+L EA  FI  +PI P   VW ++L++C  + +  +G++ A+ L +L+P +   Y+  S
Sbjct: 717 GRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYS 776

Query: 765 NMYVALGRWKDAVEI 779
           N++  +GRW+D  ++
Sbjct: 777 NVFATIGRWEDVEDV 791



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 185/698 (26%), Positives = 329/698 (47%), Gaps = 73/698 (10%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY+K G +N ++  F  M   +  SWN +MSG +      + +L+FR++   G +     
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 177 LSSAVAA---SACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAE 231
           ++S V A   S+ + +   G   H   IK G  Y+    V V  S +  Y+  G +  A+
Sbjct: 61  IASLVTACNKSSIMAK--EGFQFHGFAIKCGLIYD----VFVGTSFVHFYASYGIVSNAQ 114

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTLISLCA 289
           + F  M  ++VVSW +++  ++ NG  +E  +    M+   +   E +IA V++      
Sbjct: 115 KMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLM 174

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           D +L   G  + G+A++  L   +   NSL+  +     +++A  +FN +    D +SWN
Sbjct: 175 DIIL---GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE-RDTISWN 230

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           S+IS              F  M  +  + +++TL  +L  C S + L++GK +H   +K 
Sbjct: 231 SIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKY 290

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  +N    N L+ +Y + G    A  + +R+    D   WN ++    Q+G    A+K 
Sbjct: 291 GLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER-DLISWNSMLACYVQDGRCLCALKV 349

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITM 515
           F  M   +    + VT  + ++AC + E    GK LHG  +  ++GL     + N LIT 
Sbjct: 350 FAEMLWMKK-EINYVTFTSALAACLDPEFFTNGKILHGFVV--VLGLQDELIIGNTLITF 406

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEP-NEIS 571
           YG+C  +  A  VF+     +  TWN +I  F+ N      V A +L R       + I+
Sbjct: 407 YGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYIT 466

Query: 572 IVSILSAC-TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           IV+IL +C T   ++++G  IH H    GF  +  + S+L+ MY+ C             
Sbjct: 467 IVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQL 526

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K+++ W+++I+A   +G G EA++L   M ++GI   + +  + LS  +   +++EG 
Sbjct: 527 VFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQ 586

Query: 676 QYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPG-----VWGA 728
           Q + + ++   +  E +H +    +DM G+ G+L +A      L I P+P       W  
Sbjct: 587 QLHGSTIK---LGFELDHFIINAAMDMYGKCGELDDA------LRILPQPTDRSRLSWNT 637

Query: 729 MLSACSHHGDTKMGKQVAELLFKL--EPENVGYYISLS 764
           ++S  + HG     K+    + KL  +P +V +   LS
Sbjct: 638 LISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 160/621 (25%), Positives = 289/621 (46%), Gaps = 58/621 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  + SL+  +        + ++F E   +D ++WN++I+A  +N        +F
Sbjct: 190 GLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYF 249

Query: 62  G--EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
               +V E I +  TTL I++S    ++ LK G+ VH L++K G+ ++  LCN  +++Y+
Sbjct: 250 HWMRLVHEEINY--TTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYS 307

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
             G    +E  F  M   D +SWN++++  + +      L  F EM W  ++ + V+ +S
Sbjct: 308 DAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTS 367

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+AA       + GK++H   + LG +D   + + N+LI+ Y +C  +  A++ F  M  
Sbjct: 368 ALAACLDPEFFTNGKILHGFVVVLGLQDE--LIIGNTLITFYGKCHKMAEAKKVFQRMPK 425

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGR 298
            D V+WNA+I GFA N +  EA      M+   +   D  T+V ++  C     L++ G 
Sbjct: 426 LDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGI 485

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            +H + +      D  + +SL+  Y+K   L  +  +F+ +      V WN++I+     
Sbjct: 486 PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARY 544

Query: 354 GLFKEMLYLC----------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
           G  +E L L            QF+FST L++         LE G+ +H   +KLGF  + 
Sbjct: 545 GFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADL---AMLEEGQQLHGSTIKLGFELDH 601

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             +NA M MY  CG+L  A  +L + +  S  S WN +I    ++G F +A +TF  M  
Sbjct: 602 FIINAAMDMYGKCGELDDALRILPQPTDRSRLS-WNTLISISARHGQFHKAKETFHDML- 659

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    P+ V+ V ++SAC +  L  EG + +  ++ S+ G+   +++ +           
Sbjct: 660 KLGVKPNHVSFVCLLSACSHGGLVDEGLAYYA-SMTSVYGIQPGIEHCV----------- 707

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
                             CMI    ++   V A      +   PN++   S+L++C    
Sbjct: 708 ------------------CMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYR 749

Query: 584 VLRHGKQIHGHVFHLGFQENS 604
            L  G++   H+  L   ++S
Sbjct: 750 NLDLGRKAAKHLLELDPSDDS 770


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/728 (31%), Positives = 397/728 (54%), Gaps = 43/728 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++  L+      Q R VH L I +G+          ++ YA+  D  SS   F  +   +
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+    HN    + L Y+ EM     Q D  +  S + + A + +L  G ++H
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              +++G+E   Y+   N+LI MYS+  D++ A   F  M+ +D VSWN++I G+  NG 
Sbjct: 145 EHAMEMGFESDLYIG--NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           +E+A D+ H+ + M  + PD  T+ +++  C   + ++EG +VHG   +  +  D+++ N
Sbjct: 203 WEDALDMYHKFR-MTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGN 261

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML--YLC 363
            L+  Y K   L +A  +F+ +A + D V+WN+MI G            LF +M+  ++ 
Sbjct: 262 GLLSMYFKFERLREARRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP 320

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              S ++ +    +C     L+ GK +H + +  GF  +T+  N L+ MY  CGDL+AA 
Sbjct: 321 DMLSITSTIR---ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +    +   D+  WN +I   TQ+G+++E +++FK M  ++   PDSVT V ++S    
Sbjct: 378 EVFD-TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK--PDSVTFVLLLSIFSQ 434

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L    +G+ +H   +K     +  + N+L+ +Y +C ++     VF      ++ +WN +
Sbjct: 435 LADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTV 494

Query: 544 ISA---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I++   F       + +   R     P+E +++ IL  C+ L V R GK+IHG++F  GF
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF 554

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           + N  I +AL++MYS C               K    W+++ISA+G +G+G +A++ F +
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  SG+ P   + I+ + ACSHSG+V EGL++++ M  +Y++ P  EH+ C+VD+L RSG
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            L +A EFI ++P++P   +WGA+LSAC   G+T + ++V++ + +L  ++ GYY+ +SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734

Query: 766 MYVALGRW 773
           +Y  LG+W
Sbjct: 735 IYATLGKW 742



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/599 (28%), Positives = 297/599 (49%), Gaps = 32/599 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L++ Y+ V    SS+++F   +   +V  WN++I A   N      L ++ EM E+ 
Sbjct: 57  SGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKK 116

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D+ T   ++++  ++  L+ G +VH  +++ G  +D  + N  ++MY++  DL+++ 
Sbjct: 117 LQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNAR 176

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D+VSWN+++SG   N + E  L  + +   +G   D  ++SS + A   L 
Sbjct: 177 YVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLM 236

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G  +H +  K+G      V + N L+SMY +   +  A R F  M  KD V+WN +
Sbjct: 237 AVKEGVAVHGVIEKIGIAGD--VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTM 294

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A  G+ E +  L   M ++    PD+ ++ + I  C  S  L+ G+ VH Y I   
Sbjct: 295 ICGYAQLGRHEASVKLF--MDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKE----- 358
              D +  N L+D Y+K   L  A+ +F+      D V+WNS+I     SG +KE     
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDT-TKCKDSVTWNSLINGYTQSGYYKEGLESF 411

Query: 359 -MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M+ +  +    T + +L   +    +  G+ IHC  +K GF    I  N+L+ +Y  CG
Sbjct: 412 KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471

Query: 418 ---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--PDSV 472
              DL+  FS +   +H  D   WN VI +     HF +    F+ + + +     PD  
Sbjct: 472 EMDDLLKVFSYMS--AH--DIISWNTVIASSV---HFDDCTVGFQMINEMRTEGLMPDEA 524

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T++ ++  C  L +  +GK +HG   KS    +  + NALI MY +C  +++   VF+  
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
              ++ TW  +ISAF       +AL+ F+ +E     P+ ++ ++ + AC+  G+++ G
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 280/616 (45%), Gaps = 50/616 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  YS     +++  +F E  N+D V+WN++I+    N      L  +
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +    G+  D  T+  ++ A   +  +K+G  VH +  K G+  D  + N  ++MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   FS M   D+V+WNT++ G       E  +  F +M   G   D +S++S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTI 329

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A    G+L  GK +H   I  G+E        N LI MY++CGD+ AA+  F    CKD
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECD--TVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I+G+  +G ++E  +    M++ R  +PD  T V L+S+ +    + +GR +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMKMER--KPDSVTFVLLLSIFSQLADINQGRGIH 445

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I+     +L++ NSL+D Y+K   +     +F+ ++  +D++SWN++I+        
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA-HDIISWNTVIASSVHFDDC 504

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +  EM         +T+L ILP C+       GK IH +  K GF +N    NAL
Sbjct: 505 TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L     + + +    D   W  +I A    G  ++A+K F+ M +     P
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFGMYGEGKKALKAFQDM-ELSGVLP 622

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV  +  I AC +  +  EG       +K+   L+ R+++                   
Sbjct: 623 DSVAFIAFIFACSHSGMVKEGLRFFD-RMKTDYNLEPRMEH------------------- 662

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++   +++    +A E    +  +P+     ++LSAC   G     +
Sbjct: 663 ----------YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQ 712

Query: 590 QIHGHVFHLGFQENSF 605
           ++   +  L   +  +
Sbjct: 713 RVSKKILELNSDDTGY 728



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 197/422 (46%), Gaps = 32/422 (7%)

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +F  S+LL  L S  +   L   +++H   +  G S + I    L+  Y    D +++ S
Sbjct: 19  EFLRSSLLKTLSSAKNTPQL---RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS 75

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-- 482
           + + IS  ++   WN +I A T NG F +A+  +  M +++   PD+ T  +VI++C   
Sbjct: 76  VFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEM-REKKLQPDAFTFPSVINSCARI 134

Query: 483 -NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +LEL   G  +H  A++     D  + NALI MY R  D+ +A  VFE   N +  +WN
Sbjct: 135 LDLEL---GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWN 191

Query: 542 CMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +IS +  N     AL++   FR     P+  ++ S+L AC  L  ++ G  +HG +  +
Sbjct: 192 SLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKI 251

Query: 599 GFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELF 643
           G   +  I + LL MY                  K +  W++MI  Y   G+   +++LF
Sbjct: 252 GIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF 311

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            +M + G  P   S+ S + AC  SG +  G ++ +  L       +T     ++DM  +
Sbjct: 312 MDMID-GFVPDMLSITSTIRACGQSGDLQVG-KFVHKYLIGSGFECDTVACNILIDMYAK 369

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL-FKLEPENVGYYIS 762
            G L  A E       +     W ++++  +  G  K G +  +++  + +P++V + + 
Sbjct: 370 CGDLLAAQEVFDTTKCKDSV-TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLL 428

Query: 763 LS 764
           LS
Sbjct: 429 LS 430


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 253/803 (31%), Positives = 421/803 (52%), Gaps = 50/803 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y+     + +  LF     ++ V+WN M++  V     + G+ FF +M + GI+  S  +
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61

Query: 77  LIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
             +V+A  +   + ++G  VH    K+G+++D  +    +++Y   G ++ S   F  M 
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + VSW ++M G      PE+ +  ++ M   G   +  S+S  +++   L + S G+ 
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           I    +K G E    ++V NSLISM    G+++ A   F  M+ +D +SWN+I   +A N
Sbjct: 182 IIGQVVKSGLESK--LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239

Query: 256 GKFEEAFDLLHEMQLMRSVEPDI--ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD- 312
           G  EE+F +     LMR    ++   TV TL+S+       + GR +HG  ++  +G+D 
Sbjct: 240 GHIEESFRIF---SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDS 294

Query: 313 -LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE------MLYLCSQ 365
            + + N+L+  Y+ +    +A L+F  + P  DL+SWNS+++    +      +  LCS 
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSM 353

Query: 366 FS------FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            S      + T  + L +C +P+  E G+ +H   +  G   N I  NAL+ MY   G++
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             +  +L ++    D   WN +I    ++    +A+  F++M + +  S + +T+V+V+S
Sbjct: 414 SESRRVLLQMPRR-DVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLS 471

Query: 480 AC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           AC   G  +L   GK LH   + +    D  V+N+LITMY +C D+ S+  +F    N N
Sbjct: 472 ACLLPG--DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 529

Query: 537 LCTWNCMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + TWN M++A + +      L+L    R      ++ S    LSA  +L VL  G+Q+HG
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 589

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
               LGF+ +SFI +A  DMYS C               +S  +W+ +ISA G HG   E
Sbjct: 590 LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 649

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
               FHEM   GI+P   + +SLL+ACSH GLVD+GL YY+ +  ++ + P  EH +C++
Sbjct: 650 VCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVI 709

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGRSG+L EA  FI  +P++P   VW ++L++C  HG+   G++ AE L KLEPE+  
Sbjct: 710 DLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS 769

Query: 759 YYISLSNMYVALGRWKDAVEIGK 781
            Y+  SNM+   GRW+D   + K
Sbjct: 770 VYVLSSNMFATTGRWEDVENVRK 792



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 161/619 (26%), Positives = 288/619 (46%), Gaps = 55/619 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL++   ++   + +  +F +   +D ++WN++  A  +N  +      F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +STT+  ++S L  ++  K GR +H L +K G  +   +CN  + MYA  
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  M   D +SWN++M+  +++      L     M  SG+  + V+ +SA+
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA         G+++H L +  G   +  +   N+L+SMY + G++  + R    M  +D
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSESRRVLLQMPRRD 427

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSV 300
           VV+WNA+I G+A +   ++A      M++   V  +  TVV+++S C     LL  G+ +
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDLLERGKPL 486

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y +      D  + NSL+  Y+K   LS ++ LFN +   N +++WN+M++     G 
Sbjct: 487 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAMLAANAHHGH 545

Query: 356 FKEMLYLCS----------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            +E+L L S          QFSFS  L+   +      LE G+ +H   +KLGF +++  
Sbjct: 546 GEEVLKLVSKMRSFGVSLDQFSFSEGLS---AAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA   MY  CG++     +L   S N     WNI+I A  ++G+F+E   TF  M  + 
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEML-EM 660

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P  VT V++++AC +  L  +     GLA   ++  D  ++ A+             
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDK-----GLAYYDMIARDFGLEPAI------------- 702

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
               E C         C+I    ++     A      +  +PN++   S+L++C   G L
Sbjct: 703 ----EHCI--------CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNL 750

Query: 586 RHGKQIHGHVFHLGFQENS 604
             G++   ++  L  +++S
Sbjct: 751 DRGRKAAENLSKLEPEDDS 769



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 165/661 (24%), Positives = 307/661 (46%), Gaps = 56/661 (8%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY K G +  +   F  M   + VSWNT+MSG +      + + +FR+M   G +  +  
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 177 LSSAVAASACLGEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           ++S V A    G +   G  +H    K G     YVS   +++ +Y   G +  + + F 
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVS--TAILHLYGVYGLVSCSRKVFE 118

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLL 293
            M  ++VVSW +++ G++  G+ EE  D+   M  + +   E  ++ V++   L  D  L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
              GR + G  ++  L   L + NSL+       ++  A  +F+ ++   D +SWNS+ +
Sbjct: 179 ---GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAA 234

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        +F  M     + + +T+  +L      +  ++G+ IH   +K+GF +
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                N L+ MY   G  V A  + +++    D   WN ++ +   +G   +A+    SM
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSM 353

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 S + VT  + ++AC   +   +G+ LHGL + S +  +  + NAL++MYG+  +
Sbjct: 354 I-SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           +  +  V       ++  WN +I  +++++   +AL  F+ +  E    N I++VS+LSA
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472

Query: 579 CTQLG-VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           C   G +L  GK +H ++   GF+ +  + ++L+ MY+ C               ++   
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++M++A  +HG G E ++L  +M + G+   + S    LSA +   +++EG Q     L
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----L 587

Query: 683 EEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLP--IQPKPGVWGAMLSACSHH 736
               V+   EH   I     DM  + G++ E    +K LP  +      W  ++SA   H
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRH 644

Query: 737 G 737
           G
Sbjct: 645 G 645


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/728 (31%), Positives = 397/728 (54%), Gaps = 43/728 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++  L+      Q R VH L I +G+          ++ YA+  D  SS   F  +   +
Sbjct: 25  LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+    HN    + L Y+ EM     Q D  +  S + + A + +L  G ++H
Sbjct: 85  NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              +++G+E   Y+   N+LI MYS+  D++ A   F  M+ +D VSWN++I G+  NG 
Sbjct: 145 EHAMEMGFESDLYIG--NALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGF 202

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           +E+A D+ H+ + M  + PD  T+ +++  C   + ++EG +VHG   +  +  D+++ N
Sbjct: 203 WEDALDMYHKFR-MTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGN 261

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML--YLC 363
            L+  Y K   L +A  +F+ +A + D V+WN+MI G            LF +M+  ++ 
Sbjct: 262 GLLSMYFKFERLREARRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP 320

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              S ++ +    +C     L+ GK +H + +  GF  +T+  N L+ MY  CGDL+AA 
Sbjct: 321 DMLSITSTIR---ACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +    +   D+  WN +I   TQ+G+++E +++FK M  ++   PDSVT V ++S    
Sbjct: 378 EVFD-TTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK--PDSVTFVLLLSIFSQ 434

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L    +G+ +H   +K     +  + N+L+ +Y +C ++     VF      ++ +WN +
Sbjct: 435 LADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTV 494

Query: 544 ISA---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I++   F       + +   R     P+E +++ IL  C+ L V R GK+IHG++F  GF
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF 554

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           + N  I +AL++MYS C               K    W+++ISA+G +G+G +A++ F +
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  SG+ P   + I+ + ACSHSG+V EGL++++ M  +Y++ P  EH+ C+VD+L RSG
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            L +A EFI ++P++P   +WGA+LSAC   G+T + ++V++ + +L  ++ GYY+ +SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734

Query: 766 MYVALGRW 773
           +Y  LG+W
Sbjct: 735 IYATLGKW 742



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/599 (28%), Positives = 297/599 (49%), Gaps = 32/599 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L++ Y+ V    SS+++F   +   +V  WN++I A   N      L ++ EM E+ 
Sbjct: 57  SGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKK 116

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D+ T   ++++  ++  L+ G +VH  +++ G  +D  + N  ++MY++  DL+++ 
Sbjct: 117 LQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNAR 176

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D+VSWN+++SG   N + E  L  + +   +G   D  ++SS + A   L 
Sbjct: 177 YVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLM 236

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G  +H +  K+G      V + N L+SMY +   +  A R F  M  KD V+WN +
Sbjct: 237 AVKEGVAVHGVIEKIGIAGD--VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTM 294

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A  G+ E +  L   M ++    PD+ ++ + I  C  S  L+ G+ VH Y I   
Sbjct: 295 ICGYAQLGRHEASVKLF--MDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKE----- 358
              D +  N L+D Y+K   L  A+ +F+      D V+WNS+I     SG +KE     
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDT-TKCKDSVTWNSLINGYTQSGYYKEGLESF 411

Query: 359 -MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M+ +  +    T + +L   +    +  G+ IHC  +K GF    I  N+L+ +Y  CG
Sbjct: 412 KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471

Query: 418 ---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--PDSV 472
              DL+  FS +   +H  D   WN VI +     HF +    F+ + + +     PD  
Sbjct: 472 EMDDLLKVFSYMS--AH--DIISWNTVIASSV---HFDDCTVGFQMINEMRTEGLMPDEA 524

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T++ ++  C  L +  +GK +HG   KS    +  + NALI MY +C  +++   VF+  
Sbjct: 525 TVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
              ++ TW  +ISAF       +AL+ F+ +E     P+ ++ ++ + AC+  G+++ G
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 280/616 (45%), Gaps = 50/616 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  YS     +++  +F E  N+D V+WN++I+    N      L  +
Sbjct: 151 GFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMY 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +    G+  D  T+  ++ A   +  +K+G  VH +  K G+  D  + N  ++MY K 
Sbjct: 211 HKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   FS M   D+V+WNT++ G       E  +  F +M   G   D +S++S +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTI 329

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A    G+L  GK +H   I  G+E        N LI MY++CGD+ AA+  F    CKD
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECD--TVACNILIDMYAKCGDLLAAQEVFDTTKCKD 387

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I+G+  +G ++E  +    M++ R  +PD  T V L+S+ +    + +GR +H
Sbjct: 388 SVTWNSLINGYTQSGYYKEGLESFKMMKMER--KPDSVTFVLLLSIFSQLADINQGRGIH 445

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I+     +L++ NSL+D Y+K   +     +F+ ++  +D++SWN++I+        
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA-HDIISWNTVIASSVHFDDC 504

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +  EM         +T+L ILP C+       GK IH +  K GF +N    NAL
Sbjct: 505 TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L     + + +    D   W  +I A    G  ++A+K F+ M +     P
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISAFGMYGEGKKALKAFQDM-ELSGVLP 622

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV  +  I AC +  +  EG       +K+   L+ R+++                   
Sbjct: 623 DSVAFIAFIFACSHSGMVKEGLRFFD-RMKTDYNLEPRMEH------------------- 662

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++   +++    +A E    +  +P+     ++LSAC   G     +
Sbjct: 663 ----------YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQ 712

Query: 590 QIHGHVFHLGFQENSF 605
           ++   +  L   +  +
Sbjct: 713 RVSKKILELNSDDTGY 728



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 197/422 (46%), Gaps = 32/422 (7%)

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +F  S+LL  L S  +   L   +++H   +  G S + I    L+  Y    D +++ S
Sbjct: 19  EFLRSSLLKTLSSAKNTPQL---RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVS 75

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-- 482
           + + IS  ++   WN +I A T NG F +A+  +  M +++   PD+ T  +VI++C   
Sbjct: 76  VFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEM-REKKLQPDAFTFPSVINSCARI 134

Query: 483 -NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +LEL   G  +H  A++     D  + NALI MY R  D+ +A  VFE   N +  +WN
Sbjct: 135 LDLEL---GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWN 191

Query: 542 CMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +IS +  N     AL++   FR     P+  ++ S+L AC  L  ++ G  +HG +  +
Sbjct: 192 SLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKI 251

Query: 599 GFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELF 643
           G   +  I + LL MY                  K +  W++MI  Y   G+   +++LF
Sbjct: 252 GIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF 311

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            +M + G  P   S+ S + AC  SG +  G ++ +  L       +T     ++DM  +
Sbjct: 312 MDMID-GFVPDMLSITSTIRACGQSGDLQVG-KFVHKYLIGSGFECDTVACNILIDMYAK 369

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL-FKLEPENVGYYIS 762
            G L  A E       +     W ++++  +  G  K G +  +++  + +P++V + + 
Sbjct: 370 CGDLLAAQEVFDTTKCKDSV-TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLL 428

Query: 763 LS 764
           LS
Sbjct: 429 LS 430


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/737 (32%), Positives = 387/737 (52%), Gaps = 40/737 (5%)

Query: 78  IIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           I++ A      +  GR VH L S    +  D  L    + MY+ CG  + S   F     
Sbjct: 97  ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLGELSYGKV 195
            D   +N ++SG   N      +  F E+  + + A DN +L     A A + ++  G+ 
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +HAL +K G     +V   N+LI+MY +CG +E+A + F  M  +++VSWN+++   + N
Sbjct: 217 VHALALKAGGFSDAFVG--NALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274

Query: 256 GKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           G F E   +   + +     + PD+AT+VT+I  CA    +R G  VHG A +  +  ++
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSF 368
            + NSL+D YSK   L +A  LF+     N +VSWN++I      G F+ +  L  +   
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKN-VVSWNTIIWGYSKEGDFRGVFELLQEMQR 393

Query: 369 S--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T+L +LP+C+    L   K IH +  + GF  + +  NA +  Y  C  L 
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +   +  S WN +I A  QNG   +++  F  M       PD  T+ +++ A
Sbjct: 454 CAERVFCGMEGKT-VSSWNALIGAHAQNGFPGKSLDLFLVM-MDSGMDPDRFTIGSLLLA 511

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C  L+    GK +HG  L++ + LD  +  +L+++Y +C  +     +F+   N +L  W
Sbjct: 512 CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCW 571

Query: 541 NCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N MI+ FSQN+    AL+ FR +     +P EI++  +L AC+Q+  LR GK++H     
Sbjct: 572 NVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALK 631

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
               E++F++ AL+DMY+ C               K  A W+ +I+ YG HG G +AIEL
Sbjct: 632 AHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIEL 691

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F  M N G RP   + + +L AC+H+GLV EGL+Y   M   Y V+P+ EH+ C+VDMLG
Sbjct: 692 FELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLG 751

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L EA + +  +P +P  G+W ++LS+C ++GD ++G++V++ L +LEP     Y+ 
Sbjct: 752 RAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVL 811

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN+Y  LG+W +  ++
Sbjct: 812 LSNLYAGLGKWDEVRKV 828



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 211/781 (27%), Positives = 369/781 (47%), Gaps = 58/781 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EG 68
           ST ++  YS       S  +F     KD+  +NA+++    N      +  F E++    
Sbjct: 131 STRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATD 190

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D+ TL  +  A   +  ++ G  VH L++KAG  +D+ + N  + MY KCG + S+ 
Sbjct: 191 LAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAV 250

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAASA 185
             F  M   + VSWN++M  C  N    +C   F+ +  S E+    D  ++ + + A A
Sbjct: 251 KVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACA 310

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +GE+  G V+H L  KLG  +   V+V NSL+ MYS+CG +  A   F     K+VVSW
Sbjct: 311 AVGEVRMGMVVHGLAFKLGITEE--VTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSW 368

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N II G++  G F   F+LL EMQ    V  +  TV+ ++  C+    L   + +HGYA 
Sbjct: 369 NTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAF 428

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           R     D L+ N+ +  Y+K +SL  AE +F  +     + SWN++I             
Sbjct: 429 RHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEG-KTVSSWNALIGAHAQNGFPGKSL 487

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS-NNTIGVNALMHM 412
            LF  M+         T+ ++L +C   + L  GK IH + L+ G   +  IG+ +LM +
Sbjct: 488 DLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGI-SLMSL 546

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI C  ++    +  ++  N    CWN++I   +QN    EA+ TF+ M       P  +
Sbjct: 547 YIQCSSMLLGKLIFDKME-NKSLVCWNVMITGFSQNELPCEALDTFRQML-SGGIKPQEI 604

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            +  V+ AC  +     GK +H  ALK+ +  D  V  ALI MY +C  ++ +  +F+  
Sbjct: 605 AVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRV 664

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              +   WN +I+ +  +   ++A+ELF  ++ +   P+  + + +L AC   G++  G 
Sbjct: 665 NEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGL 724

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +      +LG  +N +     L+ Y         + ++   G  G+  EA++L +EM + 
Sbjct: 725 K------YLGQMQNLYGVKPKLEHY---------ACVVDMLGRAGQLTEALKLVNEMPD- 768

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDM---LGRSG 705
              P      SLLS+C + G ++ G +    +LE   + P + E++V + ++   LG+  
Sbjct: 769 --EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE---LEPNKAENYVLLSNLYAGLGKWD 823

Query: 706 KLQEAYEFIKNLPIQPKPG-----VWGAMLSACSHHGDTKMGKQVAELLFKLEPE--NVG 758
           ++++  + +K   +    G     + G +       G     K++ +   KLE +   +G
Sbjct: 824 EVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIG 883

Query: 759 Y 759
           Y
Sbjct: 884 Y 884



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 223/507 (43%), Gaps = 39/507 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  + SL+  YS   Y   + ALF     K+VV+WN +I    +           
Sbjct: 329 GITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELL 388

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM  EE +R +  T+L ++ A +  + L   + +H  + + G + D  + N FV  YAK
Sbjct: 389 QEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAK 448

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  L+ +E  F GM      SWN ++     N +P K L  F  M  SG   D  ++ S 
Sbjct: 449 CSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L  L  GK IH   ++ G E   ++ +  SL+S+Y QC  +   +  F  M  K
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRNGLELDEFIGI--SLMSLYIQCSSMLLGKLIFDKMENK 566

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +V WN +I GF+ N    EA D   +M L   ++P    V  ++  C+    LR G+ V
Sbjct: 567 SLVCWNVMITGFSQNELPCEALDTFRQM-LSGGIKPQEIAVTGVLGACSQVSALRLGKEV 625

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H +A++  L  D  +  +L+D Y+K   + +++ +F+ +   ++ V WN +I+G      
Sbjct: 626 HSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV-WNVIIAGYGIHGH 684

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSP----ESLEFGKSIHCWQLKLGFSNNTI 404
                 LF+ M     +    T L +L +CN      E L++          LG   N  
Sbjct: 685 GLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKY----------LGQMQNLY 734

Query: 405 GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GV   +  Y          G L  A  L+  +    D+  W+ ++ +C   G  +   + 
Sbjct: 735 GVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEV 794

Query: 458 FKSMTQ-QQNASPDSVTLVNVISACGN 483
            K + + + N + + V L N+ +  G 
Sbjct: 795 SKKLLELEPNKAENYVLLSNLYAGLGK 821


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 250/784 (31%), Positives = 415/784 (52%), Gaps = 50/784 (6%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL-KQGRV 94
           ++ V+WN M++  V     + G+ FF +M + GI+  S  +  +V+A  +   + ++G  
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           VH    K+G+++D  +    +++Y   G ++ S   F  M   + VSW ++M G      
Sbjct: 64  VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
           PE+ +  ++ M   G   +  S+S  +++   L + S G+ I    +K G E    ++V 
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK--LAVE 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           NSLISM    G+++ A   F  M+ +D +SWN+I   +A NG  EE+F +     LMR  
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF---SLMRRF 238

Query: 275 EPDI--ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLS 330
             ++   TV TL+S+       + GR +HG  ++  +G+D  + + N+L+  Y+ +    
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK--MGFDSVVCVCNTLLRMYAGAGRSV 296

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFKE------MLYLCSQFS------FSTLLAILPSC 378
           +A L+F  + P  DL+SWNS+++    +      +  LCS  S      + T  + L +C
Sbjct: 297 EANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +P+  E G+ +H   +  G   N I  NAL+ MY   G++  +  +L ++    D   W
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAW 414

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG 495
           N +I    ++    +A+  F++M + +  S + +T+V+V+SAC   G  +L   GK LH 
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPG--DLLERGKPLHA 471

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             + +    D  V+N+LITMY +C D+ S+  +F    N N+ TWN M++A + +     
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531

Query: 556 ALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
            L+L    R      ++ S    LSA  +L VL  G+Q+HG    LGF+ +SFI +A  D
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 591

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               +S  +W+ +ISA G HG   E    FHEM   GI+P   +
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVT 651

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +SLL+ACSH GLVD+GL YY+ +  ++ + P  EH +C++D+LGRSG+L EA  FI  +
Sbjct: 652 FVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKM 711

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   VW ++L++C  HG+   G++ AE L KLEPE+   Y+  SNM+   GRW+D  
Sbjct: 712 PMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVE 771

Query: 778 EIGK 781
            + K
Sbjct: 772 NVRK 775



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/619 (26%), Positives = 288/619 (46%), Gaps = 55/619 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL++   ++   + +  +F +   +D ++WN++  A  +N  +      F
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +STT+  ++S L  ++  K GR +H L +K G  +   +CN  + MYA  
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  M   D +SWN++M+  +++      L     M  SG+  + V+ +SA+
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA         G+++H L +  G   +  +   N+L+SMY + G++  + R    M  +D
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSESRRVLLQMPRRD 410

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSV 300
           VV+WNA+I G+A +   ++A      M++   V  +  TVV+++S C     LL  G+ +
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDLLERGKPL 469

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y +      D  + NSL+  Y+K   LS ++ LFN +   N +++WN+M++     G 
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAMLAANAHHGH 528

Query: 356 FKEMLYLCS----------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            +E+L L S          QFSFS  L+   +      LE G+ +H   +KLGF +++  
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLS---AAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA   MY  CG++     +L   S N     WNI+I A  ++G+F+E   TF  M  + 
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEML-EM 643

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P  VT V++++AC +  L  +     GLA   ++  D  ++ A+             
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDK-----GLAYYDMIARDFGLEPAI------------- 685

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
               E C         C+I    ++     A      +  +PN++   S+L++C   G L
Sbjct: 686 ----EHCI--------CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNL 733

Query: 586 RHGKQIHGHVFHLGFQENS 604
             G++   ++  L  +++S
Sbjct: 734 DRGRKAAENLSKLEPEDDS 752



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 160/644 (24%), Positives = 300/644 (46%), Gaps = 56/644 (8%)

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SY 192
           M   + VSWNT+MSG +      + + +FR+M   G +  +  ++S V A    G +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +H    K G     YVS   +++ +Y   G +  + + F  M  ++VVSW +++ G+
Sbjct: 61  GVQVHGFVAKSGLLSDVYVS--TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118

Query: 253 ALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           +  G+ EE  D+   M  + +   E  ++ V++   L  D  L   GR + G  ++  L 
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQIIGQVVKSGLE 175

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             L + NSL+       ++  A  +F+ ++   D +SWNS+ +             +F  
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSL 234

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     + + +T+  +L      +  ++G+ IH   +K+GF +     N L+ MY   G 
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
            V A  + +++    D   WN ++ +   +G   +A+    SM      S + VT  + +
Sbjct: 295 SVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMI-SSGKSVNYVTFTSAL 352

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC   +   +G+ LHGL + S +  +  + NAL++MYG+  ++  +  V       ++ 
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG-VLRHGKQIHGH 594
            WN +I  +++++   +AL  F+ +  E    N I++VS+LSAC   G +L  GK +H +
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           +   GF+ +  + ++L+ MY+ C               ++   W++M++A  +HG G E 
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI-- 697
           ++L  +M + G+   + S    LSA +   +++EG Q     L    V+   EH   I  
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLAVKLGFEHDSFIFN 587

Query: 698 --VDMLGRSGKLQEAYEFIKNLP--IQPKPGVWGAMLSACSHHG 737
              DM  + G++ E    +K LP  +      W  ++SA   HG
Sbjct: 588 AAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHG 628


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 243/805 (30%), Positives = 425/805 (52%), Gaps = 40/805 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++   T+LL  Y+     + S  +F     +D+++WNAM++    N C    +   
Sbjct: 169 GHGSNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETL 228

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + G+  +++TL+ IV           G  +H  ++K G I D SL +  ++MYA  
Sbjct: 229 QEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAF 288

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+SS   F      D VS+N+++S  + ++  ++    FR M  +G   + ++L S +
Sbjct: 289 DDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVL 348

Query: 182 AA-SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            + S  L  +++G+ +H + IKLG  +   VSV ++L+SMYS+ G ++++   F   T K
Sbjct: 349 PSCSDLLFGINHGESVHGMIIKLGLAEQ--VSVVSALVSMYSKLGKLDSSSLLFCCFTEK 406

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + + WN++I G+ +N ++  A D   +MQ+   V PD  TV+ +IS C  +  L   +S+
Sbjct: 407 NNILWNSMISGYLVNNEWNMALDAFCKMQIA-GVAPDATTVINVISGCRYTKDLHVAKSI 465

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H YA+R        +MN+L+  Y+    +S +  LF  +  +  L+SWN+MISG      
Sbjct: 466 HAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKM-EVRMLISWNTMISGFAEIGD 524

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M +    F   TL+ ++ S +  E    G+S+H   +K G  ++    NA
Sbjct: 525 SETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNA 584

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY NCG + A   L      + +T  +N ++    +N   ++ +  F  M +  +  
Sbjct: 585 LITMYANCGIVEAGQQLFNSFC-SRNTITYNALMSGYRKNNVSEKILPLFTQMVKN-DEK 642

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+ VTL+N++  C   +   +GK +H  A+++   L+T +  + + MY R  +I+   T+
Sbjct: 643 PNLVTLLNLLPVC---QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTI 699

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           F      NL  WN  +SA  Q K     ++ F+H+ F    P+E+++++++SAC+QLG  
Sbjct: 700 FSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNA 759

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
                I   +   GF  N  + +AL+D +S C               K +  W +MI+AY
Sbjct: 760 DFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAY 819

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG G  A++LF  M +SG+ P   + +S+LSACSH+GLV++G   + ++  ++ + P 
Sbjct: 820 SMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPR 879

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGR+G L EAY+ ++++P  P   +  ++L AC  HG+ K+G+ V +LL 
Sbjct: 880 MEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLI 939

Query: 751 KLEPENVGYYISLSNMYVALGRWKD 775
           K E      Y+ LSN+Y + G+W D
Sbjct: 940 KSEYGKSRSYVMLSNIYASAGKWSD 964



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 202/745 (27%), Positives = 363/745 (48%), Gaps = 54/745 (7%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D+ T   ++ A T  +CL+ GR VHC  ++ G  ++  +    ++MYAK G ++ S
Sbjct: 134 GFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVS 193

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D +SWN ++SG   N    + +   +EM   G   +  +L   V      
Sbjct: 194 RRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSA 253

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+   G  +HA  +K G  D    S+T++LISMY+   D+ ++   F     KD+VS+N+
Sbjct: 254 GDRVAGDSLHAFALKGGTIDDE--SLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNS 311

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIR 306
           +I  +  +  ++EAF++   M     V P++ T+V+++  C+D L  +  G SVHG  I+
Sbjct: 312 MISAYMQHSNWKEAFEVFRLMHCA-GVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIK 370

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
             L   + ++++L+  YSK   L  + LLF      N+++ WNSMISG            
Sbjct: 371 LGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNIL-WNSMISGYLVNNEWNMALD 429

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F +M         +T++ ++  C   + L   KSIH + ++  F +    +NAL+ MY 
Sbjct: 430 AFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYA 489

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           +CGD+  +++L Q++      S WN +I    + G  + ++  F  M  ++    D VTL
Sbjct: 490 DCGDISTSYTLFQKMEVRMLIS-WNTMISGFAEIGDSETSLTLFCQMFHEE-VWFDLVTL 547

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           + +IS+    E A  G+S+H LA+KS    D  + NALITMY  C  +++   +F S  +
Sbjct: 548 IGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCS 607

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC-TQLGVLRHGKQ 590
            N  T+N ++S + +N    + L LF  +   + +PN ++++++L  C +QL     GK 
Sbjct: 608 RNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQL----QGKC 663

Query: 591 IHGH-VFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHG 634
           IH + V +    E    +SA + MYS               + ++   W++ +SA     
Sbjct: 664 IHSYAVRNFTRLETPLFTSA-MGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCK 722

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEH 693
           +    ++ F  M    +RP + ++++L+SACS  G  D        +L++ + +     +
Sbjct: 723 QADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLN 782

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK-- 751
              ++D   R G +  A E   +  ++     WGAM++A S HG+ +    +  ++    
Sbjct: 783 --ALIDTHSRCGSISFARELFDS-SVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSG 839

Query: 752 LEPENVGYYISLS----NMYVALGR 772
           ++P+++ +   LS    N  V  GR
Sbjct: 840 VDPDDITFVSILSACSHNGLVEQGR 864



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 184/695 (26%), Positives = 320/695 (46%), Gaps = 55/695 (7%)

Query: 77  LIIVSALTQMNC-LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           L +++ L +  C LK  R +H     AG I D  +    V  Y   G   S+   F+  +
Sbjct: 41  LKVLTVLLRDTCSLKCLREIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAY 100

Query: 136 CADTV--SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
                  S N ++     + +  + L  +R  G  G  +DN +    + A      L  G
Sbjct: 101 RGRPAVYSLNLVVRCFSDHGFHRELLDLYR--GLCGFGSDNFTFPPVIRACTAASCLQLG 158

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + +H   ++ G+  +  V V  +L+ MY++ G I+ + R F  M  +D++SWNA++ G++
Sbjct: 159 RQVHCRVLRTGHGSN--VGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYS 216

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           +NG F EA + L EMQ    + P+ +T+V ++ +C  +     G S+H +A++     D 
Sbjct: 217 VNGCFREAVETLQEMQQC-GMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDE 275

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + ++L+  Y+  + LS + L+F+ + P+ DLVS+NSMIS             +F+ M  
Sbjct: 276 SLTSALISMYAAFDDLSSSRLVFD-LQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHC 334

Query: 362 LCSQFSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                +  TL+++LPSC+     +  G+S+H   +KLG +     V+AL+ MY   G L 
Sbjct: 335 AGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLD 394

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           ++ SLL       +   WN +I     N  +  A+  F  M Q    +PD+ T++NVIS 
Sbjct: 395 SS-SLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKM-QIAGVAPDATTVINVISG 452

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C   +     KS+H  A+++       V NAL+ MY  C DI ++ T+F+      L +W
Sbjct: 453 CRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISW 512

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH---GKQIHGHVFH 597
           N MIS F++      +L LF  +  E     +V+++   + L V      G+ +H     
Sbjct: 513 NTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIK 572

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G   +  +++AL+ MY+NC               ++   +++++S Y  +    + + L
Sbjct: 573 SGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPL 632

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP----ETEHHVCIV 698
           F +M  +  +P   ++++LL  C          Q     +  Y VR     ET      +
Sbjct: 633 FTQMVKNDEKPNLVTLLNLLPVCQS--------QLQGKCIHSYAVRNFTRLETPLFTSAM 684

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            M  R   + E    I +L       VW A LSAC
Sbjct: 685 GMYSRFNNI-EYCRTIFSLVSARNLIVWNAFLSAC 718



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  ++    +L+  +S       +  LF  +  KD VTW AMI A   +      L  
Sbjct: 772 KGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDL 831

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           F  M++ G+  D  T + I+SA +    ++QGR +
Sbjct: 832 FSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTL 866


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/741 (32%), Positives = 377/741 (50%), Gaps = 37/741 (4%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + ++   T+   L + + +H   ++AG+  D  L N+ +NMY KC  +  +   F
Sbjct: 26  DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN+++S      + +K    F EM  +G   + ++  S + A     EL 
Sbjct: 86  KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH+  IK GY+  P   V NSL+SMY +CGD+  A + F G++ +DVVS+N ++  
Sbjct: 146 NGKKIHSQIIKAGYQRDP--RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A     +E   L  +M     + PD  T + L+       +L EG+ +H   +   L  
Sbjct: 204 YAQKAYVKECLGLFGQMS-SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEMLYL 362
           D+ +  +L+    +   +  A+  F  IA   D+V +N++I+ L         F++   +
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIAD-RDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 363 CSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            S     + +T L+IL +C++ ++LE GK IH    + G S++    NAL+ MY  CGDL
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L   +    D   WN +I    +     EA++ +K M Q +   P  VT ++++S
Sbjct: 382 PKARELFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM-QSEGVKPGRVTFLHLLS 439

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC N     +GK +H   L+S +  +  + NAL+ MY RC  +  A  VFE     ++ +
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS 499

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN MI+  +Q+ +   A +LF+ +   E EP+ I+  S+LS C     L  GKQIHG + 
Sbjct: 500 WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT 559

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G Q +  + +AL++MY  C               +   +W++MI      G+  +AIE
Sbjct: 560 ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIE 619

Query: 642 LFHEMCNSGIRPTK-SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           LF +M N G RP   S+  S+LSAC+H+GLV EG Q +++M  EY V P  EH+ C+V +
Sbjct: 620 LFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGL 679

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+ + QEA   I  +P  P   VW  +L AC  HG+  + +  A    KL   N   Y
Sbjct: 680 LGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVY 739

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           I LSN+Y A GRW D  +I +
Sbjct: 740 ILLSNVYAAAGRWDDVAKIRR 760



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 180/579 (31%), Positives = 297/579 (51%), Gaps = 22/579 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F E   +DV++WN++I+   +          F EM   G   +  T + I++A      
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ +H   IKAG   D  + N  ++MY KCGDL  +   F+G+   D VS+NT++  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                Y ++CL  F +M   G   D V+  + + A      L  GK IH L ++ G    
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + V  +L++M  +CGD+++A++AF G+  +DVV +NA+I   A +G   EAF+  + M
Sbjct: 264 --IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V  +  T +++++ C+ S  L  G+ +H +        D+ + N+L+  Y++   
Sbjct: 322 R-SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L KA  LF  + P  DL+SWN++I+G            L+K+M     +    T L +L 
Sbjct: 381 LPKARELFYTM-PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +   GK IH   L+ G  +N    NALM+MY  CG L+ A ++ +  +   D  
Sbjct: 440 ACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEG-TQARDVI 498

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I    Q+G ++ A K F+ M Q +   PD++T  +V+S C N E    GK +HG 
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEM-QNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +S + LD  + NALI MY RC  ++ A  VF S  + ++ +W  MI   +    +++A
Sbjct: 558 ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKA 617

Query: 557 LELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQI 591
           +ELF  ++ E    P+  +  SILSAC   G++  G QI
Sbjct: 618 IELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQI 656



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 244/525 (46%), Gaps = 25/525 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   T+L+T        +S+   F    ++DVV +NA+I A  ++   V     +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  + TT L I++A +    L+ G+++H    + G  +D  + N  ++MYA+C
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  M   D +SWN I++G        + +  +++M   G +   V+    +
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A     + GK+IH   ++ G + + +++  N+L++MY +CG +  A+  F G   +D
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLA--NALMNMYRRCGSLMEAQNVFEGTQARD 496

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN++I G A +G +E A+ L  EMQ    +EPD  T  +++S C +   L  G+ +H
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQ-NEELEPDNITFASVLSGCKNPEALELGKQIH 555

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
           G      L  D+ + N+L++ Y +  SL  A  +F+++    D++SW +MI G       
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGED 614

Query: 358 ----EMLYLCSQFSF-----STLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVN 407
               E+ +      F     ST  +IL +CN    +  G  I    + + G         
Sbjct: 615 MKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYG 674

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+ +         A +L+ ++    D + W  ++ AC  +G+   A     +  +    
Sbjct: 675 CLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNAR 734

Query: 468 SPDS-VTLVNVISACG------NLELAFEGKSLHGLALKSLMGLD 505
           +P   + L NV +A G       +    EG+ +     +S + +D
Sbjct: 735 NPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 779



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 26/296 (8%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q +    D  T V ++  C    L  E K +H   +++ +G D  + N LI MY +CR +
Sbjct: 19  QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A  VF+     ++ +WN +IS ++Q   + +A +LF  ++   F PN+I+ +SIL+AC
Sbjct: 79  LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
                L +GK+IH  +   G+Q +  + ++LL MY  C               +   +++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +M+  Y       E + LF +M + GI P K + I+LL A +   ++DEG + +   +EE
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258

Query: 685 ---YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
               D+R  T     +V M  R G +  A +  K +  +    V+ A+++A + HG
Sbjct: 259 GLNSDIRVGT----ALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHG 309


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 232/645 (35%), Positives = 368/645 (57%), Gaps = 47/645 (7%)

Query: 172 ADNVSLSSAVAASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           ADN +    +   AC G L    G+VIH + IK+G     +V   N+LI+MY + G ++A
Sbjct: 29  ADNFTFPCVI--KACTGSLDRGLGEVIHGMVIKMGLLLDVFVG--NALIAMYGKFGFVDA 84

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLC 288
           A + F  M  +++VSWN+II GF+ NG  ++ FD+L EM      + PDIAT+VT++ +C
Sbjct: 85  AVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC 144

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           A  + ++ G  +HG A++  L  D+ + NSL+D YSK   L++A++LF+     N  VSW
Sbjct: 145 AREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKN-AVSW 203

Query: 349 NSMISGL------------FKEM-LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           N+MI GL            F+EM +    + +  T+L ILP+C     L   K +H + +
Sbjct: 204 NTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSI 263

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC---WNIVIVACTQNGHFQ 452
           + GF  + +  N  +  Y  CG L+ A    +R+ ++ +T     WN +I  C QNG  +
Sbjct: 264 RHGFQYDELVANGFVAAYAKCGMLICA----ERVFYSMETKTVNSWNALIGGCAQNGDPR 319

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +A+  +  MT      PD  T+ +++ A  +L+    GK +HG  L+  + +D+ +  +L
Sbjct: 320 KALNLYIQMTYS-GLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISL 378

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           +++Y  C +  SA  +F+     +  +WN MIS +SQN     AL LFR L    F+P++
Sbjct: 379 LSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSD 438

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNC---------- 617
           I++VS+L AC+Q   LR GK+ H +       E+ F++ + +DMY  S C          
Sbjct: 439 IAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDG 498

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              K  A+W+++I+AYG HG G E+IELF  M   G  P   + I +L+ CSH+GLV+EG
Sbjct: 499 LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEG 558

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L+Y+N M   + + P+ EH+ C++DMLGR+G+L +A   +  +P QP   VW ++LS C 
Sbjct: 559 LKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCR 618

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + G+ ++G+ VAE L +LEP+NV  Y+SLSN+Y   GRW D   +
Sbjct: 619 NFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRV 663



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 191/676 (28%), Positives = 325/676 (48%), Gaps = 51/676 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+ T   ++ A T       G V+H + IK G++ D  + N  + MY K G ++++   F
Sbjct: 30  DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVSLSSAVAASACLGE 189
             M   + VSWN+I+SG   N + + C     EM  G  G   D  +L + +   A   +
Sbjct: 90  HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G  IH L +KLG  +   V V NSL+ MYS+CG +  A+  F     K+ VSWN +I
Sbjct: 150 VQMGIRIHGLAVKLGLSED--VRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G    G   EAF+L  EMQ+   +E +  TV+ ++  C +   LR  + +HGY+IR   
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGF 267

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            YD L+ N  +  Y+K   L  AE +F ++     + SWN++I G            L+ 
Sbjct: 268 QYDELVANGFVAAYAKCGMLICAERVFYSMET-KTVNSWNALIGGCAQNGDPRKALNLYI 326

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M Y      + T+ ++L +    +SL +GK +H + L+ G   ++    +L+ +YI+CG
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCG 386

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +  +A  L   +   S  S WN +I   +QNG  ++A+  F+ +       P  + +V+V
Sbjct: 387 ESSSARLLFDGMEEKSSVS-WNAMISGYSQNGLPEDALILFRKLV-SDGFQPSDIAVVSV 444

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC        GK  H  ALK+L+  D  V  + I MY +   IK + +VF+   N +L
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDL 504

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN +I+A+  +     ++ELF   R +   P+  + + IL+ C+  G++  G +    
Sbjct: 505 ASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNE 564

Query: 595 V--FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +  FH G +      + ++DM                 G  G+  +A+ L HEM     +
Sbjct: 565 MQNFH-GIEPKLEHYACVMDM----------------LGRAGRLDDALRLVHEMPE---Q 604

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGK---LQ 708
           P      SLLS C + G ++ G      +LE   + P+  E++V + ++   SG+   ++
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQIVAEKLLE---LEPKNVENYVSLSNLYAGSGRWDDVR 661

Query: 709 EAYEFIKNLPIQPKPG 724
              + IK++ +Q   G
Sbjct: 662 RVRQMIKDIGLQKDAG 677



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 174/682 (25%), Positives = 329/682 (48%), Gaps = 39/682 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    +L+  Y    + ++++ +F+    +++V+WN++I+   EN          
Sbjct: 61  GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDML 120

Query: 62  GEMV--EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            EM+  EEG+  D  TL+ ++    +   ++ G  +H L++K G+  D  + N  V+MY+
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLS 178
           KCG L  ++  F   +  + VSWNT++ G     Y  +    FREM    + + + V++ 
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A   + +L   K +H   I+ G++    V+  N  ++ Y++CG +  AER F+ M 
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVA--NGFVAAYAKCGMLICAERVFYSME 298

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K V SWNA+I G A NG   +A +L  +M     V PD  T+ +L+   A    LR G+
Sbjct: 299 TKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLV-PDWFTIGSLLLASAHLKSLRYGK 357

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VHG+ +R  L  D  +  SL+  Y      S A LLF+ +   +  VSWN+MISG    
Sbjct: 358 EVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSS-VSWNAMISGYSQN 416

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF++++    Q S   ++++L +C+   +L  GK  HC+ LK     +    
Sbjct: 417 GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVA 476

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            + + MY   G +  + S+   +  N D + WN +I A   +G  +E+I+ F+ M ++  
Sbjct: 477 CSTIDMYAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERM-RKVG 534

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
             PD  T + +++ C +  L  EG       +++  G++ ++++   ++ M GR   +  
Sbjct: 535 QMPDGFTFIGILTVCSHAGLVEEGLKYFN-EMQNFHGIEPKLEHYACVMDMLGRAGRLDD 593

Query: 525 A-STVFESCYNCNLCTWNCMISAFSQNKAEVRALELF--RHLEFEP----NEISIVSILS 577
           A   V E     +   W+ ++S F +N  E+   ++   + LE EP    N +S+ ++ +
Sbjct: 594 ALRLVHEMPEQPDSRVWSSLLS-FCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYA 652

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGW 637
              +   +R  +Q+   +  +G Q+++    + +++     S  A  +++         W
Sbjct: 653 GSGRWDDVRRVRQM---IKDIGLQKDA--GCSWIELGGKVHSFVAGDNLLPQSKEMSMTW 707

Query: 638 EAIELFHEMCNSGIRPTKSSVI 659
             +E   +MC  G +P  S+V+
Sbjct: 708 RKLE--KKMCKIGYKPNTSAVL 727



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 250/532 (46%), Gaps = 40/532 (7%)

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           N  + +A D+  ++        D  T   +I  C  SL    G  +HG  I+  L  D+ 
Sbjct: 8   NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF-------- 366
           + N+L+  Y K   +  A  +F+ + P+ +LVSWNS+ISG F E  +    F        
Sbjct: 68  VGNALIAMYGKFGFVDAAVKVFHYM-PVRNLVSWNSIISG-FSENGFSKDCFDMLVEMMA 125

Query: 367 -------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                    +TL+ +LP C     ++ G  IH   +KLG S +    N+L+ MY  CG L
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  + +  +  S WN +I      G+  EA   F+ M  Q++   + VT++N++ 
Sbjct: 186 TEAQMLFDKNNRKNAVS-WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC  +      K LHG +++     D  V N  +  Y +C  +  A  VF S     + +
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I   +QN    +AL L+  + +    P+  +I S+L A   L  LR+GK++HG V 
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVL 364

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G + +SFI  +LL +Y +C               KS+ +W++MIS Y  +G   +A+ 
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC-IVDM 700
           LF ++ + G +P+  +V+S+L ACS    +  G + +   L+   +  E     C  +DM
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA--LLMEDVFVACSTIDM 482

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
             +SG ++E+      L        W A+++A   HGD +   ++ E + K+
Sbjct: 483 YAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERMRKV 533


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 411/761 (54%), Gaps = 50/761 (6%)

Query: 61  FGEMVEEGIRFDSTTLLI---IVSALTQMNCLK-----QGRVVHCLSIKAGMIADSSLCN 112
           F E ++   R DS+ + I     SAL Q+ C+K      G  ++    K+G+  D  + N
Sbjct: 91  FNEAMQVLERVDSSHIQIYRQTYSALLQL-CIKFKNLGDGERIYNHIKKSGVQPDIFMWN 149

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
             +NMYAKCG+  S++  F  M   D  SWN ++ G + +   E+      +M     + 
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +  S + A A    +  G+ ++ L +K G++   +V    +LI+M+ +CGDI  A +
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT--ALINMHIKCGDIGDATK 267

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  +  +D+V+W ++I G A +G+F++A +L   M+    V+PD    V+L+  C    
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME-EEGVQPDKVAFVSLLRACNHPE 326

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
            L +G+ VH  A  + +G+D  + +  +++  Y+K  S+  A  +F+ +   N +VSW +
Sbjct: 327 ALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN-VVSWTA 383

Query: 351 MISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MI+G             F +M+    + +  T ++IL +C+SP +L+ G+ I    ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           + ++     AL+ MY  CG L  A  + ++IS   +   WN +I A  Q+  +  A+ TF
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATF 502

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           +++ ++    P+S T  ++++ C + +    GK +H L +K+ +  D  V NAL++M+  
Sbjct: 503 QALLKE-GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSI 575
           C D+ SA  +F      +L +WN +I+ F Q+     A + F+ ++    +P++I+   +
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGL 621

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           L+AC     L  G+++H  +    F  +  + + L+ MY+ C               K+ 
Sbjct: 622 LNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +W+SMI+ Y  HG+G EA+ELF++M   G++P   + +  LSAC+H+GL++EGL ++ +
Sbjct: 682 YSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQS 741

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M +E+++ P  EH+ C+VD+ GR+G L EA EFI  + ++P   VWGA+L AC  H + +
Sbjct: 742 M-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVE 800

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + ++ A+   +L+P + G ++ LSN+Y A G WK+  ++ K
Sbjct: 801 LAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 178/593 (30%), Positives = 303/593 (51%), Gaps = 23/593 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+      S+  +F +   KDV +WN ++   V++           +MV++ ++ 
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + +++A      + +GR ++ L +KAG   D  +    +NM+ KCGD+  +   F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 132 SGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
             +   D V+W ++++G   H  + + C L F+ M   G Q D V+  S + A      L
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNL-FQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +HA   ++G++   YV    +++SMY++CG +E A   F  +  ++VVSW A+I 
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGT--AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GFA +G+ +EAF   ++M +   +EP+  T ++++  C+    L+ G+ +  + I    G
Sbjct: 387 GFAQHGRIDEAFLFFNKM-IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST 370
            D  +  +L+  Y+K  SL  A  +F  I+  N +V+WN+MI+   +   Y  +  +F  
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN-VVAWNAMITAYVQHEQYDNALATFQA 504

Query: 371 LL------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           LL            +IL  C S +SLE GK +H   +K G  ++    NAL+ M++NCGD
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L++A +L   +    D   WN +I    Q+G  Q A   FK M Q+    PD +T   ++
Sbjct: 565 LMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFTGLL 622

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC + E   EG+ LH L  ++    D  V   LI+MY +C  I+ A  VF      N+ 
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           +W  MI+ ++Q+     ALELF  ++ E   P+ I+ V  LSAC   G++  G
Sbjct: 683 SWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 275/592 (46%), Gaps = 24/592 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L   T+L+  +        +  +F     +D+VTW +MIT    +       + F
Sbjct: 241 GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF 300

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EEG++ D    + ++ A      L+QG+ VH    + G   +  +    ++MY KC
Sbjct: 301 QRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   + VSW  +++G   +   ++  L+F +M  SG + + V+  S +
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  G+ I    I+ GY       V  +L+SMY++CG ++ A R F  ++ ++
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDD--RVRTALLSMYAKCGSLKDAHRVFEKISKQN 478

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV+WNA+I  +  + +++ A      + L   ++P+ +T  +++++C  S  L  G+ VH
Sbjct: 479 VVAWNAMITAYVQHEQYDNALATFQAL-LKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              ++  L  DL + N+L+  +     L  A+ LFN + P  DLVSWN++I+G       
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM-PKRDLVSWNTIIAGFVQHGKN 596

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 FK M     +    T   +L +C SPE+L  G+ +H    +  F  + +    L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +  ++    +   W  +I    Q+G  +EA++ F  M QQ+   P
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGRGKEALELFYQM-QQEGVKP 714

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-S 526
           D +T V  +SAC +  L  EG  LH         ++ R+++   ++ ++GR   +  A  
Sbjct: 715 DWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772

Query: 527 TVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLEFEPNEISIVSILS 577
            + +     +   W  ++ A   +   E+      + LE +PN+  +  ILS
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 264/556 (47%), Gaps = 58/556 (10%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHE-----MQLMRSVEPDIATVVTLISLCADSLLL 294
           KD    NA+++  +  G+F EA  +L       +Q+ R       T   L+ LC     L
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQ------TYSALLQLCIKFKNL 126

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS- 353
            +G  ++ +  +  +  D+ M N+L++ Y+K  +   A+ +F+ +    D+ SWN ++  
Sbjct: 127 GDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGG 185

Query: 354 ----GLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
               GL++E   L  Q           T +++L +C    +++ G+ ++   LK G+  +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                AL++M+I CGD+  A  +   +    D   W  +I    ++G F++A   F+ M 
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRM- 303

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCR 520
           +++   PD V  V+++ AC + E   +GK +H  A    +G DT   V  A+++MY +C 
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCG 361

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILS 577
            ++ A  VF+     N+ +W  MI+ F+Q+     A   F  +     EPN ++ +SIL 
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSN-AA 622
           AC+    L+ G+QI  H+   G+  +  + +ALL MY+ C              K N  A
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVA 481

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI+AY  H +   A+  F  +   GI+P  S+  S+L+ C  S  ++ G ++ + ++
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLI 540

Query: 683 EEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
            +  +  E++ HV   +V M    G L  A     ++P +     W  +++    HG   
Sbjct: 541 MKAGL--ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKN- 596

Query: 741 MGKQVAELLFKLEPEN 756
              QVA   FK+  E+
Sbjct: 597 ---QVAFDYFKMMQES 609



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 234/496 (47%), Gaps = 21/496 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +   T++L+ Y+     E +L +F     ++VV+W AMI    ++  +     FF
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+E GI  +  T + I+ A +  + LK+G+ +    I+AG  +D  +    ++MYAKC
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   + V+WN +++  + +   +  L  F+ +   G + ++ + +S +
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L  GK +H L +K G E   +VS  N+L+SM+  CGD+ +A+  F  M  +D
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVS--NALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN II GF  +GK + AFD    MQ    ++PD  T   L++ CA    L EGR +H
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQ-ESGIKPDKITFTGLLNACASPEALTEGRRLH 638

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                     D+L+   L+  Y+K  S+  A  +F+ + P  ++ SW SMI+G       
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL-PKKNVYSWTSMITGYAQHGRG 697

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ--LKLGFSNNTIGVN 407
                LF +M     +  + T +  L +C     +E G  +H +Q   +           
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYG 755

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQN 466
            ++ ++   G L  A   + ++    D+  W  ++ AC  + + + A K   K +    N
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 467 ASPDSVTLVNVISACG 482
            +   V L N+ +A G
Sbjct: 816 DNGVFVILSNIYAAAG 831


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/733 (32%), Positives = 380/733 (51%), Gaps = 37/733 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I  AL       Q   +H L I  G+          +  YA   D  SS   F     ++
Sbjct: 78  ISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSN 137

Query: 139 TV-SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+    HN    + L  + E      Q D  +  S + A A L +    K IH
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + +G+    Y+   N+LI MY +  D++ A + F  M  +DVVSWN++I G+  NG 
Sbjct: 198 DRVLXMGFGSDLYIG--NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 255

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           + EA ++ +  + +  V PD  T+ +++  C     + EG  +HG   +  +  D+++ N
Sbjct: 256 WNEALEIYYRFRNL-GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY---------LCSQFS- 367
            L+  Y K N L     +F+ +  + D VSWN+MI G  +  LY         + +QF  
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMV-LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP 373

Query: 368 -FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T+ +IL +C     LEFGK +H + +  G+  +T   N L++MY  CG+L+A+  + 
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 433

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D+  WN +I    QNG F EA+K FK M  + +  PDSVT V ++S    L  
Sbjct: 434 SGMK-CKDSVSWNSMINVYIQNGSFDEAMKLFKMM--KTDVKPDSVTYVMLLSMSTQLGD 490

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK LH    K     +  V N L+ MY +C ++  +  VFE+    ++ TWN +I++
Sbjct: 491 LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 550

Query: 547 FSQNKA---EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              ++     +R +   R     P+  +++SIL  C+ L   R GK+IHG +F LG + +
Sbjct: 551 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 610

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + + L++MYS C               K    W+++ISA G +G+G +A+  F EM  
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 670

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +GI P   + ++++ ACSHSGLV+EGL Y++ M ++Y + P  EH+ C+VD+L RS  L 
Sbjct: 671 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 730

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           +A +FI ++P++P   +WGA+LSAC   GDT++ ++V+E + +L P++ GYY+ +SN+Y 
Sbjct: 731 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYA 790

Query: 769 ALGRWKDAVEIGK 781
           ALG+W     I K
Sbjct: 791 ALGKWDQVRSIRK 803



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 188/744 (25%), Positives = 335/744 (45%), Gaps = 67/744 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFY-ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L+  Y++     SS ++F   + + +V  WN++I A   N      L  + E     
Sbjct: 110 SAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIR 169

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D+ T   +++A   +   +  + +H   +  G  +D  + N  ++MY +  DL+ + 
Sbjct: 170 LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKAR 229

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSWN+++SG   N Y  + L  +      G   D+ ++SS + A   LG
Sbjct: 230 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 289

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G +IH L  K+G +    V V N L+SMY +   +    R F  M  +D VSWN +
Sbjct: 290 SVEEGDIIHGLIEKIGIKKD--VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G++  G +EE+  L   M+++   +PD+ T+ +++  C     L  G+ VH Y I   
Sbjct: 348 ICGYSQVGLYEESIKLF--MEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLC 363
              D    N L++ Y+K  +L  ++ +F+ +    D VSWNSMI     +G F E + L 
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF 464

Query: 364 SQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       T + +L        L  GK +HC   K+GF++N +  N L+ MY  CG
Sbjct: 465 KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           ++  +  + + +    D   WN +I +C  +      ++    M + +  +PD  T++++
Sbjct: 525 EMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM-RTEGVTPDMATMLSI 582

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C  L    +GK +HG   K  +  D  V N LI MY +C  ++++  VF+     ++
Sbjct: 583 LPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDV 642

Query: 538 CTWNCMISA---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG------ 588
            TW  +ISA   + + K  VRA          P+ ++ V+I+ AC+  G++  G      
Sbjct: 643 VTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHR 702

Query: 589 ----KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
                +I   + H     +    SALLD                         +A +   
Sbjct: 703 MKKDYKIEPRIEHYACVVDLLSRSALLD-------------------------KAEDFIL 737

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDM--- 700
            M    ++P  S   +LLSAC  SG  +   +    ++E   + P +T ++V + ++   
Sbjct: 738 SM---PLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE---LNPDDTGYYVLVSNVYAA 791

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPG 724
           LG+  +++   + IK   ++  PG
Sbjct: 792 LGKWDQVRSIRKSIKARGLKKDPG 815



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 20/501 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  Y   +  + +  +F E   +DVV+WN++I+    N      L  +
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                 G+  DS T+  ++ A   +  +++G ++H L  K G+  D  + N  ++MY K 
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L      F  M   D VSWNT++ G       E+ +  F EM  +  + D ++++S +
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSIL 382

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG+L +GK +H   I  GYE     + +N LI+MY++CG++ A++  F GM CKD
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECD--TTASNILINMYAKCGNLLASQEVFSGMKCKD 440

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN++I+ +  NG F+EA  L   M+    V+PD  T V L+S+      L  G+ +H
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFKMMKT--DVKPDSVTYVMLLSMSTQLGDLXLGKELH 498

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               +     ++++ N+L+D Y+K   +  +  +F  +    D+++WN++I+        
Sbjct: 499 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA-RDIITWNTIIASCVHSEDC 557

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +   M         +T+L+ILP C+   +   GK IH    KLG  ++    N L
Sbjct: 558 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 617

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  +F +  ++    D   W  +I AC   G  ++A++ F  M +     P
Sbjct: 618 IEMYSKCGSLRNSFQVF-KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM-EAAGIVP 675

Query: 470 DSVTLVNVISACGNLELAFEG 490
           D V  V +I AC +  L  EG
Sbjct: 676 DHVAFVAIIFACSHSGLVEEG 696



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 172/362 (47%), Gaps = 21/362 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+      S  L+  Y+      +S  +F     KD V+WN+MI   ++N      +  F
Sbjct: 405 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 464

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++  ++ DS T ++++S  TQ+  L  G+ +HC   K G  ++  + N  V+MYAKC
Sbjct: 465 -KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 523

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR---EMGWSGEQADNVSLS 178
           G++  S   F  M   D ++WNTI++ C+H+   E C L  R    M   G   D  ++ 
Sbjct: 524 GEMGDSLKVFENMKARDIITWNTIIASCVHS---EDCNLGLRMISRMRTEGVTPDMATML 580

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S +   + L     GK IH    KLG E    V V N LI MYS+CG +  + + F  M 
Sbjct: 581 SILPVCSLLAAKRQGKEIHGCIFKLGLESD--VPVGNVLIEMYSKCGSLRNSFQVFKLMK 638

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG- 297
            KDVV+W A+I    + G+ ++A     EM+    + PD    V +I  C+ S L+ EG 
Sbjct: 639 TKDVVTWTALISACGMYGEGKKAVRAFGEMEAA-GIVPDHVAFVAIIFACSHSGLVEEGL 697

Query: 298 ----RSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               R    Y I  R+  Y       ++D  S+S  L KAE    ++    D   W +++
Sbjct: 698 NYFHRMKKDYKIEPRIEHY-----ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALL 752

Query: 353 SG 354
           S 
Sbjct: 753 SA 754



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 4/262 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  S +L+  Y+       SL +F     +D++TWN +I +CV +    +GL   
Sbjct: 505 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 564

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+  D  T+L I+   + +   +QG+ +H    K G+ +D  + NV + MY+KC
Sbjct: 565 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 624

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L +S   F  M   D V+W  ++S C      +K +  F EM  +G   D+V+  + +
Sbjct: 625 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 684

Query: 182 AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            A +  G +  G    H +  K  Y+  P +     ++ + S+   ++ AE     M  K
Sbjct: 685 FACSHSGLVEEGLNYFHRM--KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 742

Query: 241 -DVVSWNAIIDGFALNGKFEEA 261
            D   W A++    ++G  E A
Sbjct: 743 PDSSIWGALLSACRMSGDTEIA 764


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 244/803 (30%), Positives = 405/803 (50%), Gaps = 37/803 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       + L+  Y      ++++ LF +  + +V  WN +I+  +  +     L  F
Sbjct: 40  GFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLF 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ-GRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M+ E +  D +T   ++ A +      Q    +H   I  G  +   +CN  +++Y+K
Sbjct: 100 SLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK 159

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ ++  F  +   D+VSW  ++SG   N   ++ +L F +M  S         SS 
Sbjct: 160 NGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSV 219

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   +     G+ +H   +K G     +V   N+L+++YS+ G++ AAE+ F  M  +
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFV--CNALVTLYSRWGNLIAAEQIFSKMHRR 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D +S+N++I G A  G  + A  L  +MQL   ++PD  TV +L+S CA      +G+ +
Sbjct: 278 DRISYNSLISGLAQRGFSDRALQLFEKMQL-DCMKPDCVTVASLLSACASVGAGYKGKQL 336

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y I+  +  DL++  SL+D Y K   +  A   F      N +V WN M+      G 
Sbjct: 337 HSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN-VVLWNVMLVAYGQLGN 395

Query: 356 FKEMLYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             E  ++  Q     L+       +IL +C S  +L+ G+ IH   +K GF  N    + 
Sbjct: 396 LSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSV 455

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY   G+L  A  +LQR+    D   W  +I   TQ+  F EA+K F+ M + Q   
Sbjct: 456 LIDMYAKHGELDTARGILQRL-REEDVVSWTAMIAGYTQHDLFAEALKLFQEM-ENQGIR 513

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D++   + ISAC  ++   +G+ +H  +  S    D  + NAL+++Y RC   + A   
Sbjct: 514 SDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLA 573

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           FE     +  +WN +IS F+Q+     AL++F  +     E N  +  S +SA      +
Sbjct: 574 FEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANI 633

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           + GKQIH  +   G+   +  S+ L+ +YS C               K+  +W++MI+ Y
Sbjct: 634 KQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGY 693

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG G EA+ LF EM   G+ P   + + +LSACSH GLV+EGL Y+ +M +E+ + P+
Sbjct: 694 SQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPK 753

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+VC+VD+LGR+  L  A EFI+ +PI+P   +W  +LSAC+ H + ++G+  A  L 
Sbjct: 754 PEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLL 813

Query: 751 KLEPENVGYYISLSNMYVALGRW 773
           +LEPE+   Y+ LSNMY   G+W
Sbjct: 814 ELEPEDSATYVLLSNMYAVSGKW 836



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 182/706 (25%), Positives = 336/706 (47%), Gaps = 41/706 (5%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E GIR +  T L +         L   + +H    K+G   +  L +  +++Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           ++++   F  +  ++   WN ++SG L      + L  F  M       D  + +S + A
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 184 -SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
            S         + IHA  I  G+  SP   V N LI +YS+ G ++ A+  F  +  KD 
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPL--VCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSW A+I G + NG+ +EA  L  +M    +V P      +++S C    L + G  +HG
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMH-KSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           + ++  L  +  + N+L+  YS+  +L  AE +F+ +    D +S+NS+ISG        
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRISYNSLISGLAQRGFSD 296

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               LF++M   C +    T+ ++L +C S  +   GK +H + +K+G S++ I   +L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            +Y+ C D+  A       +   +   WN+++VA  Q G+  E+   F  M Q +   P+
Sbjct: 357 DLYVKCFDIETAHEYF-LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM-QIEGLMPN 414

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             T  +++  C +L     G+ +H   +KS    +  V + LI MY +  ++ +A  + +
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
                ++ +W  MI+ ++Q+     AL+LF+ +E      + I   S +SAC  +  L  
Sbjct: 475 RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G+QIH   +  G+ E+  I +AL+ +Y+ C               K N +W+++IS +  
Sbjct: 535 GQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQ 594

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPET 691
            G   EA+++F +M  +G+     +  S +SA +++  + +G Q +  M++  YD   ET
Sbjct: 595 SGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYD--SET 652

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           E    ++ +  + G +++A      +P +     W AM++  S HG
Sbjct: 653 EASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 411/761 (54%), Gaps = 50/761 (6%)

Query: 61  FGEMVEEGIRFDSTTLLI---IVSALTQMNCLK-----QGRVVHCLSIKAGMIADSSLCN 112
           F E ++   R DS+ + I     SAL Q+ C+K      G  ++    K+G+  D  + N
Sbjct: 91  FNEAMQVLERVDSSHIQIYRQTYSALLQL-CIKFKNLGDGERIYNHIKKSGVQPDIFMRN 149

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
             +NMYAKCG+  S++  F  M   D  SWN ++ G + +   E+      +M     + 
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +  S + A A    +  G+ ++ L +K G++   +V    +LI+M+ +CGDI  A +
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGT--ALINMHIKCGDIGDATK 267

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  +  +D+V+W ++I G A +G+F++A +L   M+    V+PD    V+L+  C    
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME-EEGVQPDKVAFVSLLRACNHPE 326

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
            L +G+ VH  A  + +G+D  + +  +++  Y+K  S+  A  +F+ +   N +VSW +
Sbjct: 327 ALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRN-VVSWTA 383

Query: 351 MISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MI+G             F +M+    + +  T ++IL +C+SP +L+ G+ I    ++ G
Sbjct: 384 MIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG 443

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           + ++     AL+ MY  CG L  A  + ++IS   +   WN +I A  Q+  +  A+ TF
Sbjct: 444 YGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATF 502

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           +++ ++    P+S T  ++++ C + +    GK +H L +K+ +  D  V NAL++M+  
Sbjct: 503 QALLKE-GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSI 575
           C D+ SA  +F      +L +WN +I+ F Q+     A + F+ ++    +P++I+   +
Sbjct: 562 CGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGL 621

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           L+AC     L  G+++H  +    F  +  + + L+ MY+ C               K+ 
Sbjct: 622 LNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNV 681

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +W+SMI+ Y  HG+G EA+ELF++M   G++P   + +  LSAC+H+GL++EGL ++ +
Sbjct: 682 YSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQS 741

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M +E+++ P  EH+ C+VD+ GR+G L EA EFI  + ++P   VWGA+L AC  H + +
Sbjct: 742 M-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVE 800

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + ++ A+   +L+P + G ++ LSN+Y A G WK+  ++ K
Sbjct: 801 LAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRK 841



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/593 (30%), Positives = 303/593 (51%), Gaps = 23/593 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+      S+  +F +   KDV +WN ++   V++           +MV++ ++ 
Sbjct: 150 TLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKP 209

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + +++A      + +GR ++ L +KAG   D  +    +NM+ KCGD+  +   F
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 132 SGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
             +   D V+W ++++G   H  + + C L F+ M   G Q D V+  S + A      L
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNL-FQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +HA   ++G++   YV    +++SMY++CG +E A   F  +  ++VVSW A+I 
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGT--AILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GFA +G+ +EAF   ++M +   +EP+  T ++++  C+    L+ G+ +  + I    G
Sbjct: 387 GFAQHGRIDEAFLFFNKM-IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST 370
            D  +  +L+  Y+K  SL  A  +F  I+  N +V+WN+MI+   +   Y  +  +F  
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN-VVAWNAMITAYVQHEQYDNALATFQA 504

Query: 371 LL------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           LL            +IL  C S +SLE GK +H   +K G  ++    NAL+ M++NCGD
Sbjct: 505 LLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGD 564

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L++A +L   +    D   WN +I    Q+G  Q A   FK M Q+    PD +T   ++
Sbjct: 565 LMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFK-MMQESGIKPDKITFTGLL 622

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC + E   EG+ LH L  ++    D  V   LI+MY +C  I+ A  VF      N+ 
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           +W  MI+ ++Q+     ALELF  ++ E   P+ I+ V  LSAC   G++  G
Sbjct: 683 SWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 275/592 (46%), Gaps = 24/592 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L   T+L+  +        +  +F     +D+VTW +MIT    +       + F
Sbjct: 241 GWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLF 300

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EEG++ D    + ++ A      L+QG+ VH    + G   +  +    ++MY KC
Sbjct: 301 QRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKC 360

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   + VSW  +++G   +   ++  L+F +M  SG + + V+  S +
Sbjct: 361 GSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSIL 420

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  G+ I    I+ GY       V  +L+SMY++CG ++ A R F  ++ ++
Sbjct: 421 GACSSPSALKRGQQIQDHIIEAGYGSDD--RVRTALLSMYAKCGSLKDAHRVFEKISKQN 478

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV+WNA+I  +  + +++ A      + L   ++P+ +T  +++++C  S  L  G+ VH
Sbjct: 479 VVAWNAMITAYVQHEQYDNALATFQAL-LKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              ++  L  DL + N+L+  +     L  A+ LFN + P  DLVSWN++I+G       
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM-PKRDLVSWNTIIAGFVQHGKN 596

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 FK M     +    T   +L +C SPE+L  G+ +H    +  F  + +    L
Sbjct: 597 QVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGL 656

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +  ++    +   W  +I    Q+G  +EA++ F  M QQ+   P
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGRGKEALELFYQM-QQEGVKP 714

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-S 526
           D +T V  +SAC +  L  EG  LH         ++ R+++   ++ ++GR   +  A  
Sbjct: 715 DWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772

Query: 527 TVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLEFEPNEISIVSILS 577
            + +     +   W  ++ A   +   E+      + LE +PN+  +  ILS
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 264/556 (47%), Gaps = 58/556 (10%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHE-----MQLMRSVEPDIATVVTLISLCADSLLL 294
           KD    NA+++  +  G+F EA  +L       +Q+ R       T   L+ LC     L
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQ------TYSALLQLCIKFKNL 126

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS- 353
            +G  ++ +  +  +  D+ M N+L++ Y+K  +   A+ +F+ +    D+ SWN ++  
Sbjct: 127 GDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGG 185

Query: 354 ----GLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
               GL++E   L  Q           T +++L +C    +++ G+ ++   LK G+  +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                AL++M+I CGD+  A  +   +    D   W  +I    ++G F++A   F+ M 
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLP-TRDLVTWTSMITGLARHGRFKQACNLFQRM- 303

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCR 520
           +++   PD V  V+++ AC + E   +GK +H  A    +G DT   V  A+++MY +C 
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVH--ARMKEVGWDTEIYVGTAILSMYTKCG 361

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILS 577
            ++ A  VF+     N+ +W  MI+ F+Q+     A   F  +     EPN ++ +SIL 
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSN-AA 622
           AC+    L+ G+QI  H+   G+  +  + +ALL MY+ C              K N  A
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVA 481

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI+AY  H +   A+  F  +   GI+P  S+  S+L+ C  S  ++ G ++ + ++
Sbjct: 482 WNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELG-KWVHFLI 540

Query: 683 EEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
            +  +  E++ HV   +V M    G L  A     ++P +     W  +++    HG   
Sbjct: 541 MKAGL--ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS-WNTIIAGFVQHGKN- 596

Query: 741 MGKQVAELLFKLEPEN 756
              QVA   FK+  E+
Sbjct: 597 ---QVAFDYFKMMQES 609



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 234/496 (47%), Gaps = 21/496 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +   T++L+ Y+     E +L +F     ++VV+W AMI    ++  +     FF
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+E GI  +  T + I+ A +  + LK+G+ +    I+AG  +D  +    ++MYAKC
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   + V+WN +++  + +   +  L  F+ +   G + ++ + +S +
Sbjct: 462 GSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSIL 521

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L  GK +H L +K G E   +VS  N+L+SM+  CGD+ +A+  F  M  +D
Sbjct: 522 NVCKSSDSLELGKWVHFLIMKAGLESDLHVS--NALVSMFVNCGDLMSAKNLFNDMPKRD 579

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN II GF  +GK + AFD    MQ    ++PD  T   L++ CA    L EGR +H
Sbjct: 580 LVSWNTIIAGFVQHGKNQVAFDYFKMMQ-ESGIKPDKITFTGLLNACASPEALTEGRRLH 638

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                     D+L+   L+  Y+K  S+  A  +F+ + P  ++ SW SMI+G       
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL-PKKNVYSWTSMIAGYAQHGRG 697

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ--LKLGFSNNTIGVN 407
                LF +M     +  + T +  L +C     +E G  +H +Q   +           
Sbjct: 698 KEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYG 755

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQN 466
            ++ ++   G L  A   + ++    D+  W  ++ AC  + + + A K   K +    N
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815

Query: 467 ASPDSVTLVNVISACG 482
            +   V L N+ +A G
Sbjct: 816 DNGVFVILSNIYAAAG 831


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/733 (32%), Positives = 380/733 (51%), Gaps = 37/733 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I  AL       Q   +H L I  G+          +  YA   D  SS   F     ++
Sbjct: 19  ISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSN 78

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+    HN    + L  + E      Q D  +  S + A A L +    K IH
Sbjct: 79  NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 138

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + +G+    Y+   N+LI MY +  D++ A + F  M  +DVVSWN++I G+  NG 
Sbjct: 139 DRVLDMGFGSDLYIG--NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           + EA ++ +  + +  V PD  T+ +++  C     + EG  +HG   +  +  D+++ N
Sbjct: 197 WNEALEIYYRFRNL-GVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY---------LCSQF-- 366
            L+  Y K N L     +F+ +  + D VSWN+MI G  +  LY         + +QF  
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMV-LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP 314

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T+ +IL +C     LEFGK +H + +  G+  +T   N L++MY  CG+L+A+  + 
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVF 374

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +    D+  WN +I    QNG F EA+K FK M  + +  PDSVT V ++S    L  
Sbjct: 375 SGMK-CKDSVSWNSMINVYIQNGSFDEAMKLFKMM--KTDVKPDSVTYVMLLSMSTQLGD 431

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK LH    K     +  V N L+ MY +C ++  +  VFE+    ++ TWN +I++
Sbjct: 432 LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 491

Query: 547 FSQNKA---EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              ++     +R +   R     P+  +++SIL  C+ L   R GK+IHG +F LG + +
Sbjct: 492 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 551

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + + L++MYS C               K    W+++ISA G +G+G +A+  F EM  
Sbjct: 552 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 611

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +GI P   + ++++ ACSHSGLV+EGL Y++ M ++Y + P  EH+ C+VD+L RS  L 
Sbjct: 612 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 671

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           +A +FI ++P++P   +WGA+LSAC   GDT++ ++V+E + +L P++ GYY+ +SN+Y 
Sbjct: 672 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYA 731

Query: 769 ALGRWKDAVEIGK 781
           ALG+W     I K
Sbjct: 732 ALGKWDQVRSIRK 744



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 189/744 (25%), Positives = 335/744 (45%), Gaps = 67/744 (9%)

Query: 10  STSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L+  Y++     SS ++F   + + +V  WN++I A   N      L  + E     
Sbjct: 51  SAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIR 110

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D+ T   +++A   +   +  + +H   +  G  +D  + N  ++MY +  DL+ + 
Sbjct: 111 LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKAR 170

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSWN+++SG   N Y  + L  +      G   D+ ++SS + A   LG
Sbjct: 171 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 230

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G +IH L  K+G +    V V N L+SMY +   +    R F  M  +D VSWN +
Sbjct: 231 SVEEGDIIHGLIEKIGIKKD--VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 288

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G++  G +EE+  L   M+++   +PD+ T+ +++  C     L  G+ VH Y I   
Sbjct: 289 ICGYSQVGLYEESIKLF--MEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 346

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLC 363
              D    N L++ Y+K  +L  ++ +F+ +    D VSWNSMI     +G F E + L 
Sbjct: 347 YECDTTASNILINMYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF 405

Query: 364 SQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       T + +L        L  GK +HC   K+GF++N +  N L+ MY  CG
Sbjct: 406 KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 465

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           ++  +  + + +    D   WN +I +C  +      ++    M + +  +PD  T++++
Sbjct: 466 EMGDSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM-RTEGVTPDMATMLSI 523

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C  L    +GK +HG   K  +  D  V N LI MY +C  ++++  VF+     ++
Sbjct: 524 LPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDV 583

Query: 538 CTWNCMISA---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG------ 588
            TW  +ISA   + + K  VRA          P+ ++ V+I+ AC+  G++  G      
Sbjct: 584 VTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHR 643

Query: 589 ----KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
                +I   + H     +    SALLD     K+     SM                  
Sbjct: 644 MKKDYKIEPRIEHYACVVDLLSRSALLD-----KAEDFILSM------------------ 680

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDM--- 700
                 ++P  S   +LLSAC  SG  +   +    ++E   + P +T ++V + ++   
Sbjct: 681 -----PLKPDSSIWGALLSACRMSGDTEIAERVSERIIE---LNPDDTGYYVLVSNIYAA 732

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPG 724
           LG+  +++   + IK   ++  PG
Sbjct: 733 LGKWDQVRSIRKSIKARGLKKDPG 756



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 20/501 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  Y   +  + +  +F E   +DVV+WN++I+    N      L  +
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                 G+  DS T+  ++ A   +  +++G ++H L  K G+  D  + N  ++MY K 
Sbjct: 205 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L      F  M   D VSWNT++ G       E+ +  F EM  +  + D ++++S +
Sbjct: 265 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSIL 323

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG+L +GK +H   I  GYE     + +N LI+MY++CG++ A++  F GM CKD
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGYECD--TTASNILINMYAKCGNLLASQEVFSGMKCKD 381

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN++I+ +  NG F+EA  L   M+    V+PD  T V L+S+      L  G+ +H
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFKMMK--TDVKPDSVTYVMLLSMSTQLGDLHLGKELH 439

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               +     ++++ N+L+D Y+K   +  +  +F  +    D+++WN++I+        
Sbjct: 440 CDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA-RDIITWNTIIASCVHSEDC 498

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +   M         +T+L+ILP C+   +   GK IH    KLG  ++    N L
Sbjct: 499 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 558

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  +F +  ++    D   W  +I AC   G  ++A++ F  M +     P
Sbjct: 559 IEMYSKCGSLRNSFQVF-KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEM-EAAGIVP 616

Query: 470 DSVTLVNVISACGNLELAFEG 490
           D V  V +I AC +  L  EG
Sbjct: 617 DHVAFVAIIFACSHSGLVEEG 637



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 172/362 (47%), Gaps = 21/362 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+      S  L+  Y+      +S  +F     KD V+WN+MI   ++N      +  F
Sbjct: 346 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 405

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++  ++ DS T ++++S  TQ+  L  G+ +HC   K G  ++  + N  V+MYAKC
Sbjct: 406 -KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 464

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR---EMGWSGEQADNVSLS 178
           G++  S   F  M   D ++WNTI++ C+H+   E C L  R    M   G   D  ++ 
Sbjct: 465 GEMGDSLKVFENMKARDIITWNTIIASCVHS---EDCNLGLRMISRMRTEGVTPDMATML 521

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S +   + L     GK IH    KLG E    V V N LI MYS+CG +  + + F  M 
Sbjct: 522 SILPVCSLLAAKRQGKEIHGCIFKLGLESD--VPVGNVLIEMYSKCGSLRNSFQVFKLMK 579

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG- 297
            KDVV+W A+I    + G+ ++A     EM+    + PD    V +I  C+ S L+ EG 
Sbjct: 580 TKDVVTWTALISACGMYGEGKKAVRAFGEME-AAGIVPDHVAFVAIIFACSHSGLVEEGL 638

Query: 298 ----RSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               R    Y I  R+  Y       ++D  S+S  L KAE    ++    D   W +++
Sbjct: 639 NYFHRMKKDYKIEPRIEHY-----ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALL 693

Query: 353 SG 354
           S 
Sbjct: 694 SA 695



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 4/262 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  S +L+  Y+       SL +F     +D++TWN +I +CV +    +GL   
Sbjct: 446 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 505

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+  D  T+L I+   + +   +QG+ +H    K G+ +D  + NV + MY+KC
Sbjct: 506 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 565

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L +S   F  M   D V+W  ++S C      +K +  F EM  +G   D+V+  + +
Sbjct: 566 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 625

Query: 182 AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            A +  G +  G    H +  K  Y+  P +     ++ + S+   ++ AE     M  K
Sbjct: 626 FACSHSGLVEEGLNYFHRM--KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 683

Query: 241 -DVVSWNAIIDGFALNGKFEEA 261
            D   W A++    ++G  E A
Sbjct: 684 PDSSIWGALLSACRMSGDTEIA 705


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 228/725 (31%), Positives = 393/725 (54%), Gaps = 40/725 (5%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           N +   +++H   I +G+ +D+ L N+ +N+ +K   ++++   F  M   + ++W++++
Sbjct: 41  NPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMV 100

Query: 147 SGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           S      Y E+ L+ F ++   SGE  +   L+S + A   LG +  G  +H   ++ G+
Sbjct: 101 SMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF 160

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           +   YV    SLI  YS+ G+IE A   F  ++ K  V+W  II G+   G+   + +L 
Sbjct: 161 DQDVYVGT--SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 218

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            +M+   +V PD   V +++S C+    L  G+ +H Y +RR    D+ ++N L+DFY+K
Sbjct: 219 AQMR-ETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTK 277

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
            N +     LF+ +   N ++SW +MISG            LF EM  L  +       +
Sbjct: 278 CNRVKAGRKLFDQMVVKN-IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTS 336

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L SC S E+LE G+ +H + +K    ++    N L+ MY     L+ A  +   ++  +
Sbjct: 337 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 396

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKS 492
             S +N +I   +      EA++ F  M + +   P  +T V+++    +L  A E  K 
Sbjct: 397 VIS-YNAMIEGYSSQEKLSEALELFHEM-RVRLFPPSLLTFVSLLGVSASL-FALELSKQ 453

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HGL +K  + LD    +ALI +Y +C  +K A  VFE     ++  WN M   ++Q+  
Sbjct: 454 IHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLE 513

Query: 553 EVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL+L+  L+F   +PNE +  ++++A + L  LRHG+Q H  +  +G     F+++A
Sbjct: 514 NEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 573

Query: 610 LLDMYSNCKS--------NAA-------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+DMY+ C S        N++       W+SMIS +  HG+  EA+ +F EM   GI+P 
Sbjct: 574 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 633

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             + +++LSACSH+G V++GL ++N+M   + ++P TEH+ C+V +LGRSGKL EA EFI
Sbjct: 634 YVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFI 692

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           + +PI+P   VW ++LSAC   G+ ++GK  AE+    +P++ G YI LSN++ + G W 
Sbjct: 693 EKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWA 752

Query: 775 DAVEI 779
           D  ++
Sbjct: 753 DVKKV 757



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 191/690 (27%), Positives = 323/690 (46%), Gaps = 50/690 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FLA++     L+   S     +++  +F +  +K+++TW++M++   +       L  F 
Sbjct: 63  FLANI-----LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFV 117

Query: 63  EMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           ++  + G   +   L  ++ A TQ+  +++G  +H   +++G   D  +    ++ Y+K 
Sbjct: 118 DLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKN 177

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +   F  +     V+W TI++G          L  F +M  +    D   +SS +
Sbjct: 178 GNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL 237

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + L  L  GK IHA  ++ G E    VSV N LI  Y++C  ++A  + F  M  K+
Sbjct: 238 SACSMLEFLEGGKQIHAYVLRRGTEMD--VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 295

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW  +I G+  N    EA  L  EM  +   +PD     ++++ C     L +GR VH
Sbjct: 296 IISWTTMISGYMQNSFDWEAMKLFGEMNRL-GWKPDGFACTSVLTSCGSREALEQGRQVH 354

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y I+  L  D  + N L+D Y+KSN L  A+ +F+ +A  N ++S+N+MI G       
Sbjct: 355 AYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN-VISYNAMIEGYSSQEKL 413

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM       S  T +++L    S  +LE  K IH   +K G S +    +AL
Sbjct: 414 SEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSAL 473

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  C  +  A  + + ++   D   WN +    TQ+   +EA+K + ++ Q     P
Sbjct: 474 IDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTL-QFSRQKP 531

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSAST 527
           +  T   +I+A  NL     G+  H   +K  MGLD    V NAL+ MY +C  I+ A  
Sbjct: 532 NEFTFAALITAASNLASLRHGQQFHNQLVK--MGLDFCPFVTNALVDMYAKCGSIEEARK 589

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           +F S    ++  WN MIS  +Q+     AL +FR +  E   PN ++ V++LSAC+  G 
Sbjct: 590 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 649

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           +  G      +   G +  +                  ++ ++S  G  GK +EA E   
Sbjct: 650 VEDGLNHFNSMPGFGIKPGT----------------EHYACVVSLLGRSGKLFEAKEFIE 693

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           +M    I P      SLLSAC  +G V+ G
Sbjct: 694 KMP---IEPAAIVWRSLLSACRIAGNVELG 720



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 165/600 (27%), Positives = 273/600 (45%), Gaps = 49/600 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   TSL+  YS     E +  +F +   K  VTW  +I    +     + L  F
Sbjct: 159 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 218

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   +  ++SA + +  L+ G+ +H   ++ G   D S+ NV ++ Y KC
Sbjct: 219 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 278

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +    F  M   + +SW T++SG + N++  + +  F EM   G + D  + +S +
Sbjct: 279 NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVL 338

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +      L  G+ +HA  IK   E   +V   N LI MY++   +  A++ F  M  ++
Sbjct: 339 TSCGSREALEQGRQVHAYTIKANLESDEFVK--NGLIDMYAKSNLLIDAKKVFDVMAEQN 396

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+S+NA+I+G++   K  EA +L HEM++ R   P + T V+L+ + A    L   + +H
Sbjct: 397 VISYNAMIEGYSSQEKLSEALELFHEMRV-RLFPPSLLTFVSLLGVSASLFALELSKQIH 455

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
           G  I+  +  DL   ++L+D YSK + +  A  +F  +    D+V WN+M  G  +    
Sbjct: 456 GLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQHLEN 514

Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L L S   FS       T  A++ + ++  SL  G+  H   +K+G        NAL
Sbjct: 515 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 574

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +    S   D  CWN +I    Q+G  +EA+  F+ M  ++   P
Sbjct: 575 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREM-MKEGIQP 632

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VT V V+SAC +      G+   GL             N   +M G    IK  +   
Sbjct: 633 NYVTFVAVLSACSH-----AGRVEDGL-------------NHFNSMPG--FGIKPGTE-- 670

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++S   ++     A E    +  EP  I   S+LSAC   G +  GK
Sbjct: 671 ---------HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGK 721



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 24/258 (9%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q  N  P      N++    +       K +HG  + S +  DT + N LI +  +   +
Sbjct: 19  QIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRV 78

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSA 578
            +A  VF+   + NL TW+ M+S +SQ      AL +F  L+ +    PNE  + S++ A
Sbjct: 79  DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRA 138

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           CTQLGV+  G Q+HG V   GF ++ ++ ++L+D YS                 K+   W
Sbjct: 139 CTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 198

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +++I+ Y   G+   ++ELF +M  + + P +  V S+LSACS    ++ G Q     + 
Sbjct: 199 TTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ-----IH 253

Query: 684 EYDVRPETEHHVCIVDML 701
            Y +R  TE  V +V++L
Sbjct: 254 AYVLRRGTEMDVSVVNVL 271


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 250/810 (30%), Positives = 416/810 (51%), Gaps = 75/810 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  Y+     + +  LF     ++ V+WN M++  V     + G+ FF +M + GI
Sbjct: 110 TNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI 169

Query: 70  RFDSTTLLIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  S  +  +V+A  +   + ++G  VH    K+G+++D  +    +++Y   G ++ S 
Sbjct: 170 KPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSR 229

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + VSW ++M G      PE+ +  +++                      LG
Sbjct: 230 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD--------------------ESLG 269

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               G+V+     K G E    ++V NSLISM    G+++ A   F  M+ +D +SWN+I
Sbjct: 270 RQIIGQVV-----KSGLESK--LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 322

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDI--ATVVTLISLCADSLLLREGRSVHGYAIR 306
              +A NG  EE+F +     LMR    ++   TV TL+S+       + GR +HG  ++
Sbjct: 323 AAAYAQNGHIEESFRIF---SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 379

Query: 307 RLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE------ 358
             +G+D  + + N+L+  Y+ +    +A L+F  + P  DL+SWNS+++    +      
Sbjct: 380 --MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVNDGRSLDA 436

Query: 359 MLYLCSQFS------FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +  LCS  S      + T  + L +C +P+  E G+ +H   +  G   N I  NAL+ M
Sbjct: 437 LGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 496

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G++  +  +L ++    D   WN +I    ++    +A+  F++M + +  S + +
Sbjct: 497 YGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYI 554

Query: 473 TLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           T+V+V+SAC   G  +L   GK LH   + +    D  V+N+LITMY +C D+ S+  +F
Sbjct: 555 TVVSVLSACLLPG--DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 612

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLR 586
               N N+ TWN M++A + +      L+L    R      ++ S    LSA  +L VL 
Sbjct: 613 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 672

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            G+Q+HG    LGF+ +SFI +A  DMYS C               +S  +W+ +ISA G
Sbjct: 673 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 732

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG   E    FHEM   GI+P   + +SLL+ACSH GLVD+GL YY+ +  ++ + P  
Sbjct: 733 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 792

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH +C++D+LGRSG+L EA  FI  +P++P   VW ++L++C  HG+   G++ AE L K
Sbjct: 793 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSK 852

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           LEPE+   Y+  SNM+   GRW+D   + K
Sbjct: 853 LEPEDDSVYVLSSNMFATTGRWEDVENVRK 882



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 172/695 (24%), Positives = 315/695 (45%), Gaps = 79/695 (11%)

Query: 82  ALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
             +Q+     GR VH L +K G++  S L  N  +NMY K G +  +   F  M   + V
Sbjct: 81  GFSQITIETTGRAVHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEV 139

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SYGKVIHAL 199
           SWNT+MSG +      + + +FR+M   G +  +  ++S V A    G +   G  +H  
Sbjct: 140 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 199

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
             K G     YVS   +++ +Y   G +  + + F  M  ++VVSW +++ G++  G+ E
Sbjct: 200 VAKSGLLSDVYVS--TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 257

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           E  D+  +  L                          GR + G  ++  L   L + NSL
Sbjct: 258 EVIDIYKDESL--------------------------GRQIIGQVVKSGLESKLAVENSL 291

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +       ++  A  +F+ ++   D +SWNS+ +             +F  M     + +
Sbjct: 292 ISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 350

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            +T+  +L      +  ++G+ IH   +K+GF +     N L+ MY   G  V A  + +
Sbjct: 351 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 410

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           ++    D   WN ++ +   +G   +A+    SM      S + VT  + ++AC   +  
Sbjct: 411 QMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMI-SSGKSVNYVTFTSALAACFTPDFF 468

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
            +G+ LHGL + S +  +  + NAL++MYG+  ++  +  V       ++  WN +I  +
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 528

Query: 548 SQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG-VLRHGKQIHGHVFHLGFQEN 603
           ++++   +AL  F+ +  E    N I++VS+LSAC   G +L  GK +H ++   GF+ +
Sbjct: 529 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 588

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + ++L+ MY+ C               ++   W++M++A  +HG G E ++L  +M +
Sbjct: 589 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 648

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRS 704
            G+   + S    LSA +   +++EG Q     L    V+   EH   I     DM  + 
Sbjct: 649 FGVSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLAVKLGFEHDSFIFNAAADMYSKC 703

Query: 705 GKLQEAYEFIKNLP--IQPKPGVWGAMLSACSHHG 737
           G++ E    +K LP  +      W  ++SA   HG
Sbjct: 704 GEIGEV---VKMLPPSVNRSLPSWNILISALGRHG 735



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 161/619 (26%), Positives = 288/619 (46%), Gaps = 55/619 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL++   ++   + +  +F +   +D ++WN++  A  +N  +      F
Sbjct: 280 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 339

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +STT+  ++S L  ++  K GR +H L +K G  +   +CN  + MYA  
Sbjct: 340 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 399

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  M   D +SWN++M+  +++      L     M  SG+  + V+ +SA+
Sbjct: 400 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 459

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA         G+++H L +  G   +  +   N+L+SMY + G++  + R    M  +D
Sbjct: 460 AACFTPDFFEKGRILHGLVVVSGLFYNQIIG--NALVSMYGKIGEMSESRRVLLQMPRRD 517

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSV 300
           VV+WNA+I G+A +   ++A      M++   V  +  TVV+++S C     LL  G+ +
Sbjct: 518 VVAWNALIGGYAEDEDPDKALAAFQTMRV-EGVSSNYITVVSVLSACLLPGDLLERGKPL 576

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y +      D  + NSL+  Y+K   LS ++ LFN +   N +++WN+M++     G 
Sbjct: 577 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAMLAANAHHGH 635

Query: 356 FKEMLYLCS----------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            +E+L L S          QFSFS  L+   +      LE G+ +H   +KLGF +++  
Sbjct: 636 GEEVLKLVSKMRSFGVSLDQFSFSEGLS---AAAKLAVLEEGQQLHGLAVKLGFEHDSFI 692

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA   MY  CG++     +L   S N     WNI+I A  ++G+F+E   TF  M  + 
Sbjct: 693 FNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWNILISALGRHGYFEEVCATFHEML-EM 750

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P  VT V++++AC +  L  +     GLA   ++  D  ++ A+             
Sbjct: 751 GIKPGHVTFVSLLTACSHGGLVDK-----GLAYYDMIARDFGLEPAI------------- 792

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
               E C         C+I    ++     A      +  +PN++   S+L++C   G L
Sbjct: 793 ----EHCI--------CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNL 840

Query: 586 RHGKQIHGHVFHLGFQENS 604
             G++   ++  L  +++S
Sbjct: 841 DRGRKAAENLSKLEPEDDS 859


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 245/819 (29%), Positives = 417/819 (50%), Gaps = 79/819 (9%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF E   +++  WN MI A       +  L  +G M   G   D  T   ++ A   M  
Sbjct: 131 LFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED 190

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           +   R +    +KAG+  +  +    V+ YA+ G ++ +  +   +     V+WN +++G
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            +     E+    F  M   G   DN + +SA+     L     GK +H+  I  G++  
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   N+LI MY++C D E+  + F  M  ++ V+WN+II   A  G F +A  L   M
Sbjct: 311 TFVG--NALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 368

Query: 269 QL--MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           Q    +S   ++ +++   +  AD   + +GR +HG+ +R LL  D+++ ++L+D YSK 
Sbjct: 369 QESGYKSNRFNLGSILMASAGLAD---IGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLY---------LCSQFSFST 370
             + +A  +F ++   N+ VS+N++++G  +E        LY            QF+F+T
Sbjct: 426 GMVEEAHQVFRSLLERNE-VSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTT 484

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           LL +   C +  +   G+ IH   ++   + N I    L+HMY  CG L  A  +  R++
Sbjct: 485 LLTL---CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             +  S WN +I    QNG  QEA++ FK M Q     PD  +L +++S+C +L  + +G
Sbjct: 542 ERNAYS-WNSMIEGYQQNGETQEALRLFKQM-QLNGIKPDCFSLSSMLSSCVSLSDSQKG 599

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           + LH   +++ M  +  +Q  L+ MY +C  +  A  V++     ++   N M+SAF  +
Sbjct: 600 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNS 659

Query: 551 KAEVRALELFRHLE----------------------------------FEPNEISIVSIL 576
                A  LF  +E                                   E + +++V+I+
Sbjct: 660 GRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 719

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFI-SSALLDMYSNC---------------KSN 620
           + C+ L  L HG Q+H  +   GF   S +  +AL+DMYS C               K+ 
Sbjct: 720 NLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +W++MIS Y  HG   EA+ L+ EM   G+ P + + +++LSACSH+GLV+EGL+ + +
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 839

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M E+Y++  + EH+ C+VD+LGR+G+L++A EF++ +PI+P+   WGA+L AC  H D  
Sbjct: 840 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 899

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           MG+  A+ LF+L+P+N G Y+ +SN+Y A GRWK+  +I
Sbjct: 900 MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDI 938



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 199/775 (25%), Positives = 353/775 (45%), Gaps = 77/775 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   +L    +L+  Y+   + + ++    E     VVTWNA+I   V+          F
Sbjct: 205 GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF 264

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M++ G+  D+ T    +     +     G+ VH   I  G   D+ + N  ++MYAKC
Sbjct: 265 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D  S    F  M   + V+WN+I+S      +    L+ F  M  SG +++  +L S +
Sbjct: 325 DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL 384

Query: 182 AASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            ASA L ++  G+ +H   ++ L   D   + + ++L+ MYS+CG +E A + F  +  +
Sbjct: 385 MASAGLADIGKGRELHGHLVRNLLNSD---IILGSALVDMYSKCGMVEEAHQVFRSLLER 441

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + VS+NA++ G+   GK EEA +L H+MQ    ++PD  T  TL++LCA+     +GR +
Sbjct: 442 NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 501

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + IR  +  ++++   L+  YS+   L+ A+ +FN +A  N   SWNSMI G      
Sbjct: 502 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN-AYSWNSMIEGYQQNGE 560

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LFK+M     +    +L ++L SC S    + G+ +H + ++       I    
Sbjct: 561 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 620

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA- 467
           L+ MY  CG +  A+ +  + +   D    N+++ A   +G   +A   F  M Q+  A 
Sbjct: 621 LVDMYAKCGSMDYAWKVYDQ-TIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL 679

Query: 468 -----------------------------SPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
                                          D +T+V +++ C +L     G  LH L +
Sbjct: 680 WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLII 739

Query: 499 KS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           K   +     ++ AL+ MY +C  I  A TVF++    N+ +WN MIS +S++     AL
Sbjct: 740 KKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEAL 799

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            L+  +  +   PNE++ ++ILSAC+  G++  G +I                +++ + Y
Sbjct: 800 ILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIF---------------TSMQEDY 844

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           +       ++ M+   G  G+  +A E   +M    I P  S+  +LL AC     +D G
Sbjct: 845 NIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM---PIEPEVSTWGALLGACRVHKDMDMG 901

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQEAYEFIKNLPIQPKPGV 725
                 + E   + P+      I+  +    GR  ++++  + +K   ++  PGV
Sbjct: 902 RLAAQRLFE---LDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGV 953



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 178/726 (24%), Positives = 319/726 (43%), Gaps = 86/726 (11%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG---DLNSSECTFSGMHCADTVSWN 143
           N  ++G+ +H   I  G   D+ L    + +YA+ G   DL  +   F  M   +  +WN
Sbjct: 85  NSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWN 144

Query: 144 T-IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           T I++    ++Y E   LY R  G SG  +D  +  S + A   + ++   + + +  +K
Sbjct: 145 TMILAYARVDDYMEVLRLYGRMRG-SGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVK 203

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G   + +V    +L+  Y++ G ++ A  +   +    VV+WNA+I G+     +EEA+
Sbjct: 204 AGLNCNLFVG--GALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAW 261

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            +   M L   V PD  T  + + +C        G+ VH   I      D  + N+L+D 
Sbjct: 262 GIFDRM-LKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDM 320

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------T 370
           Y+K +       +F+ +   N  V+WNS+IS     G F + L L  +   S        
Sbjct: 321 YAKCDDEESCLKVFDEMGERNQ-VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFN 379

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L +IL +      +  G+ +H   ++   +++ I  +AL+ MY  CG +  A  + + + 
Sbjct: 380 LGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLL 439

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             ++ S +N ++    Q G  +EA++ +  M  +    PD  T   +++ C N     +G
Sbjct: 440 ERNEVS-YNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG 498

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           + +H   +++ +  +  V+  L+ MY  C  +  A  +F      N  +WN MI  + QN
Sbjct: 499 RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQN 558

Query: 551 KAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL LF+ ++    +P+  S+ S+LS+C  L   + G+++H  +     +E   + 
Sbjct: 559 GETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ 618

Query: 608 SALLDMYSNCKS-NAAW--------------SSMISAYGYHGKGWEAIELFHEMCNSGIR 652
             L+DMY+ C S + AW              + M+SA+   G+  +A  LF +M      
Sbjct: 619 VVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM------ 672

Query: 653 PTKSSVI--SLLSACSHSGLVDEGLQYYNNMLE---EYDV------------RPETEH-- 693
             +++ +  S+L+  ++ GL  E   ++  MLE   EYDV             P  EH  
Sbjct: 673 EQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGD 732

Query: 694 ------------------HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACS 734
                                +VDM  + G + +A     N+    K  V W AM+S  S
Sbjct: 733 QLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM--NGKNIVSWNAMISGYS 790

Query: 735 HHGDTK 740
            HG +K
Sbjct: 791 KHGCSK 796



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 232/506 (45%), Gaps = 49/506 (9%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS---NSLSKAELLFNAI 339
           +LI  C DS   + G+S+H   I      D  +M  ++  Y++S   + L  A  LF  +
Sbjct: 76  SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135

Query: 340 APMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFG 387
            P  +L +WN+MI        + E+L L  +   S       T  +++ +C + E +   
Sbjct: 136 -PERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           + +    +K G + N     AL+  Y   G +  A + L  I   S  + WN VI    +
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVT-WNAVIAGYVK 253

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
              ++EA   F  M  +    PD+ T  + +  CG L     GK +H   +      DT 
Sbjct: 254 ILSWEEAWGIFDRML-KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTF 312

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V NALI MY +C D +S   VF+     N  TWN +ISA +Q      AL LF  ++   
Sbjct: 313 VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESG 372

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           ++ N  ++ SIL A   L  +  G+++HGH+       +  + SAL+DMYS C       
Sbjct: 373 YKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAH 432

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHS 668
                   ++  +++++++ Y   GK  EA+EL+H+M    GI+P + +  +LL+ C++ 
Sbjct: 433 QVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQ 492

Query: 669 GLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
              ++G Q + +++      ++  ETE    +V M    G+L  A E I N   +     
Sbjct: 493 RNDNQGRQIHAHLIRANITKNIIVETE----LVHMYSECGRLNYAKE-IFNRMAERNAYS 547

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFK 751
           W +M+     +G+T    Q A  LFK
Sbjct: 548 WNSMIEGYQQNGET----QEALRLFK 569


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 245/781 (31%), Positives = 416/781 (53%), Gaps = 48/781 (6%)

Query: 36  KDVVTWNAMIT--ACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           KD   WN++I   A ++N   +  L  + +M   G+  ++TTL +++ A    N +++G+
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAI--LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 73

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H       ++ D  +    V+ Y KCG +  + C F  M   D V WN ++ G +   
Sbjct: 74  SIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWG 133

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS-PYVS 212
             E+ +L  REMG    + ++ ++ + + A     EL  G+ +H   ++ G  DS P+V+
Sbjct: 134 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 193

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              +LI  Y +  D+      F  M  +++VSWNA+I G+   G + +A +L  +M L+ 
Sbjct: 194 T--ALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM-LVD 249

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            V+ D  T++  +  CA+   L+ G+ +H  AI+     DL ++N+L++ YS + SL  +
Sbjct: 250 EVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESS 309

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             LF ++ P  D   WNSMIS             LF  M     +    T++ +L  C  
Sbjct: 310 HQLFESV-PNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 368

Query: 381 PES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMY--INCGDLVAAFSLLQRISHNSDTSC 437
             S L  GKS+H   +K G   +    NAL+ MY  +NC + V    +  R+    D   
Sbjct: 369 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ--KIFDRMK-GVDIIS 425

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I+A  +N    +A + F+ M + +   P+S T++++++AC ++     G+S+HG  
Sbjct: 426 WNTMILALARNTLRAQACELFERMRESE-IKPNSYTIISILAACEDVTCLDFGRSIHGYV 484

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K  + ++  ++ AL  MY  C D  +A  +FE C + +L +WN MI+++ +N    +AL
Sbjct: 485 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKAL 544

Query: 558 ELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS--SALLDM 613
            LF  +  E EPN ++I+++LS+ T L  L  G+ +H +V   GF     +S  +A + M
Sbjct: 545 LLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 604

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               ++  +W++MI+ YG +G+G +A+  F +M   G RP   + 
Sbjct: 605 YARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTF 664

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +S+LSACSHSG ++ GLQ +++M+++++V PE  H+ CIVD+L R G + EA EFI ++P
Sbjct: 665 VSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP 724

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           I+P   VW A+LS+C  + D K  K + E L KLEP N G Y+ LSN+Y   G W +   
Sbjct: 725 IEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRR 784

Query: 779 I 779
           I
Sbjct: 785 I 785



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 236/501 (47%), Gaps = 23/501 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+  L    +LL  YSN    ESS  LF    N+D   WN+MI+A     C    +  F 
Sbjct: 286 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFI 345

Query: 63  EMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M  EG++ D  T++I++S   ++ + L +G+ +H   IK+GM  D+SL N  ++MY + 
Sbjct: 346 RMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 405

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + S +  F  M   D +SWNT++     N    +    F  M  S  + ++ ++ S +
Sbjct: 406 NCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISIL 465

Query: 182 AASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           AA   +  L +G+ IH   +K   E + P   +  +L  MY  CGD   A   F G   +
Sbjct: 466 AACEDVTCLDFGRSIHGYVMKHSIEINQP---LRTALADMYMNCGDEATARDLFEGCPDR 522

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SWNA+I  +  N +  +A  L H M  +   EP+  T++ ++S       L +G+S+
Sbjct: 523 DLISWNAMIASYVKNNQAHKALLLFHRM--ISEAEPNSVTIINVLSSFTHLATLPQGQSL 580

Query: 301 HGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           H Y  RR   LG DL + N+ +  Y++  SL  AE +F  + P  +++SWN+MI+G    
Sbjct: 581 HAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTL-PKRNIISWNAMIAGYGMN 639

Query: 356 ---------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIG 405
                    F +ML    + +  T +++L +C+    +E G  + H        +   + 
Sbjct: 640 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVH 699

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            + ++ +    G +  A   +  +    D S W  ++ +C      ++A   F+ + + +
Sbjct: 700 YSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLE 759

Query: 466 NASPDSVTLVNVISACGNLEL 486
             +  +  L++ + A   L L
Sbjct: 760 PMNAGNYVLLSNVYATAGLWL 780


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/808 (30%), Positives = 410/808 (50%), Gaps = 45/808 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   +L  +  LL  Y      + +  +F +   K++  W  MI    E       +  +
Sbjct: 148 GMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVY 207

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +E  + +  T L I+ A      LK G+ +H   I++G  +D  +    VNMY KC
Sbjct: 208 DKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKC 267

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  F  M   + +SW  ++ G  H    ++    F +M   G   ++ +  S +
Sbjct: 268 GSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSIL 327

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A+A  G L + K +H+  +  G   +  + V N+L+ MY++ G I+ A   F GMT +D
Sbjct: 328 NANASAGALEWVKEVHSHAVNAGL--ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERD 385

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI--SLCADSLLLREGRS 299
           + SW  +I G A +G+ +EAF L  +MQ      P++ T ++++  S  A +  L   + 
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQ-RNGCLPNLTTYLSILNASAIASTSALEWVKV 444

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           VH +A       DL + N+L+  Y+K  S+  A L+F+ +    D++SWN+M+ GL +  
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCD-RDVISWNAMMGGLAQNG 503

Query: 360 LYLCSQFSFS---------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
              C   +F+               T L++L +  S ++LE+   +H   ++ G  ++  
Sbjct: 504 ---CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFR 560

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +A +HMYI CG +  A  L  ++S    T+ WN +I    Q    +EA+  F  M Q+
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLSVRHVTT-WNAMIGGAAQQRCGREALSLFLQM-QR 618

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +   PD+ T +N++SA  + E     K +H  A  + + +D RV NAL+  Y +C ++K 
Sbjct: 619 EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKY 677

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ 581
           A  VF+     N+ TW  MI   +Q+     A   F  +  E   P+  + VSILSAC  
Sbjct: 678 AKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAS 737

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSM 626
            G L   K++H H    G   +  + +AL+ MY+ C S                 +W+ M
Sbjct: 738 TGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVM 797

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I     HG+G EA++ F +M + G +P   S +++L+ACSH+GLVDEG + + +M ++Y 
Sbjct: 798 IGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYG 857

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P  EH+ C+VD+LGR+G L+EA  FI N+PI+P    WGA+L AC  +G+ +M +  A
Sbjct: 858 IEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAA 917

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWK 774
           +   KL+P++   Y+ LSN+Y A G+W+
Sbjct: 918 KERLKLKPKSASTYVLLSNIYAATGKWE 945



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 202/731 (27%), Positives = 345/731 (47%), Gaps = 60/731 (8%)

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQ-----GRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           V++GI  DS + + I+       CLKQ      + VH   IK+GM  +  + N  + +Y 
Sbjct: 110 VQQGIAIDSFSYVNILQ-----RCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYI 164

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CG L  +   F  +   +   W T++ G     + E  +  + +M     Q + ++  S
Sbjct: 165 RCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLS 224

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A  C   L +GK IHA  I+ G++    V V  +L++MY +CG IE A+  F  M  
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSGFQSD--VRVETALVNMYVKCGSIEDAQLIFDKMVE 282

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++V+SW  +I G A  G+ +EAF L  +MQ      P+  T V++++  A +  L   + 
Sbjct: 283 RNVISWTVMIGGLAHYGRGQEAFHLFLQMQ-REGFIPNSYTYVSILNANASAGALEWVKE 341

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE- 358
           VH +A+   L  DL + N+L+  Y+KS S+  A ++F+ +    D+ SW  MI GL +  
Sbjct: 342 VHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE-RDIFSWTVMIGGLAQHG 400

Query: 359 ------MLYLCSQF-----SFSTLLAIL--PSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                  L+L  Q      + +T L+IL   +  S  +LE+ K +H    + GF ++   
Sbjct: 401 RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRI 460

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NAL+HMY  CG +  A  +   +  + D   WN ++    QNG   EA   F  M QQ+
Sbjct: 461 GNALIHMYAKCGSIDDARLVFDGMC-DRDVISWNAMMGGLAQNGCGHEAFTVFLQM-QQE 518

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PDS T +++++  G+ +       +H  A+++ +  D RV +A I MY RC  I  A
Sbjct: 519 GLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDA 578

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             +F+     ++ TWN MI   +Q +    AL LF  ++   F P+  + ++ILSA    
Sbjct: 579 RLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDE 638

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMI 627
             L   K++H H    G  +   + +AL+  YS C               ++   W+ MI
Sbjct: 639 EALEWVKEVHSHATDAGLVDLR-VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMI 697

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE--- 684
                HG G +A   F +M   GI P  ++ +S+LSAC+ +G ++   + +N+ +     
Sbjct: 698 GGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLV 757

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
            D+R        +V M  + G + +A     ++ ++     W  M+   + HG    G +
Sbjct: 758 SDLRVGN----ALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHG---RGLE 809

Query: 745 VAELLFKLEPE 755
             +   K++ E
Sbjct: 810 ALDFFVKMKSE 820


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/571 (35%), Positives = 324/571 (56%), Gaps = 34/571 (5%)

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + V W   I G+  NG + +A  L ++MQ    + PD    +++I  C     L+ GR V
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQ-RTGINPDKLVFLSVIKACGSQSDLQAGRKV 142

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I R    D+++  +L   Y+K  SL  A  +F+ + P  D+VSWN++I+G      
Sbjct: 143 HEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRM-PKRDVVSWNAIIAGYSQNGQ 201

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EM     + + STL++++P C    +LE GK IHC+ ++ G  ++ + VN 
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG++  A  L +R+    D + WN +I   + N    EA+  F  M Q +   
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMP-IRDVASWNAIIGGYSLNSQHHEALAFFNRM-QVRGIK 319

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+S+T+V+V+ AC +L    +G+ +HG A++S    +  V NAL+ MY +C ++ SA  +
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL 379

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           FE     N+  WN +IS +SQ+     AL LF  ++    +P+  +IVS+L AC     L
Sbjct: 380 FERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             GKQIHG+    GF+ N  + + L+D+Y+ C               +   +W++MI AY
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAY 499

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G HG G +A+ LF +M  +G +    +  ++L+ACSH+GLVD+GLQY+  M  +Y + P+
Sbjct: 500 GIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK 559

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGR+G L EA   IKN+ ++P   VWGA+L AC  H + ++G+Q A+ LF
Sbjct: 560 LEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLF 619

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +L+P+N GYY+ LSN+Y    RW+D  ++ K
Sbjct: 620 ELDPDNAGYYVLLSNIYAEAQRWEDVAKLRK 650



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/546 (29%), Positives = 270/546 (49%), Gaps = 28/546 (5%)

Query: 7   LPTSTSLLTAYSN-------VSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           LPTST +     N       VS   +           + V W   I   V+N      L 
Sbjct: 47  LPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALR 106

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            + +M   GI  D    L ++ A    + L+ GR VH   I  G  +D  +     +MY 
Sbjct: 107 LYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYT 166

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L ++   F  M   D VSWN I++G   N  P + L  F EM  +G + ++ +L S
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +   A L  L  GK IH   I+ G E    V V N L++MY++CG++  A + F  M  
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESD--VLVVNGLVNMYAKCGNVNTAHKLFERMPI 284

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DV SWNAII G++LN +  EA    + MQ+ R ++P+  T+V+++  CA    L +G+ 
Sbjct: 285 RDVASWNAIIGGYSLNSQHHEALAFFNRMQV-RGIKPNSITMVSVLPACAHLFALEQGQQ 343

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGYAIR     + ++ N+L++ Y+K  +++ A  LF  + P  ++V+WN++ISG     
Sbjct: 344 IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM-PKKNVVAWNAIISGYSQHG 402

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF EM     +     ++++LP+C    +LE GK IH + ++ GF +N +   
Sbjct: 403 HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGT 462

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+ +Y  CG++  A  L +R+    D   W  +I+A   +GH ++A+  F  M Q+   
Sbjct: 463 GLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGEDALALFSKM-QETGT 520

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
             D +    +++AC +  L  +G   +   +KS  GL  ++++   L+ + GR   +  A
Sbjct: 521 KLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEA 579

Query: 526 STVFES 531
           + + ++
Sbjct: 580 NGIIKN 585



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 242/458 (52%), Gaps = 17/458 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF + +   T+L + Y+     E++  +F     +DVV+WNA+I    +N      L  
Sbjct: 149 RGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALAL 208

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM   GI+ +S+TL+ ++     +  L+QG+ +HC +I++G+ +D  + N  VNMYAK
Sbjct: 209 FSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAK 268

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++N++   F  M   D  SWN I+ G   N+   + L +F  M   G + +++++ S 
Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSV 328

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L  L  G+ IH   I+ G+E +  V   N+L++MY++CG++ +A + F  M  K
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVG--NALVNMYAKCGNVNSAYKLFERMPKK 386

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV+WNAII G++ +G   EA  L  EMQ  + ++PD   +V+++  CA  L L +G+ +
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQ-AQGIKPDSFAIVSVLPACAHFLALEQGKQI 445

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-------- 352
           HGY IR     ++++   L+D Y+K  +++ A+ LF  + P  D+VSW +MI        
Sbjct: 446 HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERM-PEQDVVSWTTMILAYGIHGH 504

Query: 353 ----SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVN 407
                 LF +M    ++       AIL +C+    ++ G +   C +   G +       
Sbjct: 505 GEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYA 564

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            L+ +    G L  A  +++ +S   D + W  ++ AC
Sbjct: 565 CLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/794 (30%), Positives = 400/794 (50%), Gaps = 38/794 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L++ YS     E +  +F    +KDVV+WNAMI+    +         F +M  EG++ +
Sbjct: 141 LISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPN 200

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T + I+SA      L+ G  +H    KAG  +D ++    +NMY KCG L  +   F+
Sbjct: 201 QNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFN 260

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW  ++SG + +    + L  FR++  SG Q + VS +S + A     +L  
Sbjct: 261 EMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGE 320

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +HA   + G E    V V N+LISMYS+CG +  A + F  +   +  +WNA+I G+
Sbjct: 321 GLKLHAYIKQAGLEQE--VLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY 378

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
              G  EEAF L   M+  +  +PD  T  +L+++CAD   L  G+ +H          D
Sbjct: 379 G-EGLMEEAFRLFRAME-QKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTD 436

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEML 360
           L +  +L+  Y+K  S  +A  +FN + P  +++SWN+ IS              FK+M 
Sbjct: 437 LTVATALISMYAKCGSPEEARKVFNQM-PERNVISWNAFISCCCRHDLGKEAFQAFKQMR 495

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T + +L SC SPE LE G+ IH    + G  +N    NAL+ MY  CG+L 
Sbjct: 496 RDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLA 555

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +  RI    D   WN +I A  Q+G    A   F+   + +    D  T +NV+ A
Sbjct: 556 DAREVFYRI-RRRDLGSWNAMIAANVQHGANGSAFDLFRKY-RSEGGKGDKYTFINVLRA 613

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
             NLE    G+ +HGL  K   G D RV   LI MY +C  ++ A  VF +    ++  W
Sbjct: 614 VANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCW 673

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N M++A++ +     AL+LF+ ++ E   P+  +  + L+AC +L  + HGK+IH  +  
Sbjct: 674 NAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKE 733

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G + ++ +S++L++MYS C               +   +W+++I+ Y  +G+G  A+E 
Sbjct: 734 AGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEY 793

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           +  M  + I P K++  S+LS+ +  G  ++   +  ++ +E+++ P  +H+  +V  LG
Sbjct: 794 YELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALG 853

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE-NVGYYI 761
           R+G L+EA EFI+ +  +    +W ++L AC  H + ++ +   E L   + + +     
Sbjct: 854 RAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCE 913

Query: 762 SLSNMYVALGRWKD 775
            L ++Y A GRW+D
Sbjct: 914 QLMSIYAAAGRWED 927



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 219/808 (27%), Positives = 393/808 (48%), Gaps = 62/808 (7%)

Query: 17  YSNVSYFESSLALFYETCNKDVV------TWN---AMITACVENRCVVMGLHFFGEM-VE 66
           Y   +YF +S  + + + +++        TW+    ++    E + +   +   G+  V+
Sbjct: 38  YDGKAYFGNSTPISFTSNDEERRIRESNNTWDEGPKIVRDTREGKSIKGAVQLLGKRGVQ 97

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
             + F +  L   V A +    L +G+ VH     A    D  L N+ ++MY+KCG +  
Sbjct: 98  ANLNFYARRLQQCVLAKS----LAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIED 153

Query: 127 SECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F  M   D VSWN ++SG  LH    E   L++ +M   G + +  +  S ++A  
Sbjct: 154 ANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFY-QMQREGLKPNQNTFISILSACQ 212

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L +G+ IH+   K GYE    V+V+ +LI+MY +CG +E A + F  M  ++VVSW
Sbjct: 213 SPIALEFGEQIHSRIAKAGYESD--VNVSTALINMYCKCGSLELARKVFNEMRERNVVSW 270

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            A+I G+  +G   EA  L    +L+RS ++P+  +  +++  C +   L EG  +H Y 
Sbjct: 271 TAMISGYVQHGDSREALALFR--KLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYI 328

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            +  L  ++L+ N+L+  YS+  SL+ A  +F+ +  +N   +WN+MI+G          
Sbjct: 329 KQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNR-TTWNAMIAGYGEGLMEEAF 387

Query: 355 -LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
            LF+ M    +   +F++++LLAI   C     L+ GK +H      G+  +     AL+
Sbjct: 388 RLFRAMEQKGFQPDKFTYASLLAI---CADRADLDRGKELHSQIASTGWQTDLTVATALI 444

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG    A  +  ++   +  S WN  I  C ++   +EA + FK M ++ + +PD
Sbjct: 445 SMYAKCGSPEEARKVFNQMPERNVIS-WNAFISCCCRHDLGKEAFQAFKQM-RRDDVNPD 502

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            +T + ++++C + E    G+ +HG   +  M  +  V NALI+MYGRC ++  A  VF 
Sbjct: 503 HITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFY 562

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                +L +WN MI+A  Q+ A   A +LFR    E    ++ + +++L A   L  L  
Sbjct: 563 RIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDA 622

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G+ IHG V   GF ++  + + L+ MYS C               K    W++M++AY +
Sbjct: 623 GRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAH 682

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
             +G +A++LF +M   G+ P  S+  + L+AC+    V+ G + +   L+E  +  +T 
Sbjct: 683 SDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQ-LKEAGMETDTR 741

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
               +++M  R G L  A +  + + +      W A+++    +G   +  +  EL+ + 
Sbjct: 742 VSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIAGYCQNGQGNIALEYYELMLRA 800

Query: 753 E-PENVGYYISLSNMYVALGRWKDAVEI 779
               N   + S+ + Y  LG  + A + 
Sbjct: 801 SIVPNKATFTSILSSYAQLGEEEQAFDF 828



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 175/597 (29%), Positives = 292/597 (48%), Gaps = 22/597 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + +  ST+L+  Y      E +  +F E   ++VV+W AMI+  V++      L  F
Sbjct: 231 GYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALF 290

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++  GI+ +  +   I+ A T  N L +G  +H    +AG+  +  + N  ++MY++C
Sbjct: 291 RKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRC 350

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F  +   +  +WN +++G       E+    FR M   G Q D  + +S +
Sbjct: 351 GSLANARQVFDNLRSLNRTTWNAMIAG-YGEGLMEEAFRLFRAMEQKGFQPDKFTYASLL 409

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A  A   +L  GK +H+     G++    ++V  +LISMY++CG  E A + F  M  ++
Sbjct: 410 AICADRADLDRGKELHSQIASTGWQTD--LTVATALISMYAKCGSPEEARKVFNQMPERN 467

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWNA I     +   +EAF    +M+    V PD  T +TL++ C     L  GR +H
Sbjct: 468 VISWNAFISCCCRHDLGKEAFQAFKQMR-RDDVNPDHITFITLLNSCTSPEDLERGRYIH 526

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G   +  +  +  + N+L+  Y +  +L+ A  +F  I    DL SWN+MI+        
Sbjct: 527 GKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIR-RRDLGSWNAMIAANVQHGAN 585

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++      +    T + +L +  + E L+ G+ IH    K GF  +   +  L
Sbjct: 586 GSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTL 645

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A ++   +    D  CWN ++ A   +   Q+A+K F+ M Q +  +P
Sbjct: 646 IKMYSKCGSLRDAENVFSTV-QEKDVVCWNAMLAAYAHSDRGQDALKLFQQM-QLEGVNP 703

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DS T    ++AC  L     GK +H    ++ M  DTRV N+LI MY RC  + SA  VF
Sbjct: 704 DSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVF 763

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLG 583
           E   + ++ +WN +I+ + QN     ALE +         PN+ +  SILS+  QLG
Sbjct: 764 EKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLG 820



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 221/461 (47%), Gaps = 25/461 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  +T+L++ Y+     E +  +F +   ++V++WNA I+ C  +         F
Sbjct: 432 GWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAF 491

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  + +  D  T + ++++ T    L++GR +H    + GM++++ + N  ++MY +C
Sbjct: 492 KQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRC 551

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F  +   D  SWN +++  + +         FR+    G + D  +  + +
Sbjct: 552 GNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVL 611

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L +L  G++IH L  K G+     + V  +LI MYS+CG +  AE  F  +  KD
Sbjct: 612 RAVANLEDLDAGRMIHGLVEKGGFGKD--IRVLTTLIKMYSKCGSLRDAENVFSTVQEKD 669

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV WNA++  +A + + ++A  L  +MQL   V PD +T  T ++ CA    +  G+ +H
Sbjct: 670 VVCWNAMLAAYAHSDRGQDALKLFQQMQL-EGVNPDSSTYSTALNACARLTAVEHGKKIH 728

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
                  +  D  + NSL++ YS+   L  A+ +F  +    D+ SWN++I+G       
Sbjct: 729 AQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLS-RDINSWNALIAGYCQNGQG 787

Query: 356 -----FKEMLYLCS----QFSFSTLLAILPSCNSPE-SLEFGKSIHC-WQLKLGFSNNTI 404
                + E++   S    + +F+++L+        E + +F +SI   W ++    +   
Sbjct: 788 NIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAY 847

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            V AL       G L  A   ++ IS  S    W  ++VAC
Sbjct: 848 MVAALGR----AGLLKEAEEFIEEISAESAALMWESLLVAC 884


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/806 (29%), Positives = 408/806 (50%), Gaps = 43/806 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A +     L+  Y      + ++ +F E   + +  WN ++   V  +     L  F
Sbjct: 98  GFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLF 157

Query: 62  GEMVEEGIRFDSTTLLIIVSAL----TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             M++E ++ D  T   ++          +C+++   +H  +I  G      +CN  +++
Sbjct: 158 RRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEK---IHARTITHGYENSLFVCNPLIDL 214

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G LNS++  F G+   D+VSW  ++SG   +   E+ +L F +M  SG        
Sbjct: 215 YFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIF 274

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           SS ++A   +     G+ +H L +K G+    YV   N+L+++YS+ G+   AE+ F  M
Sbjct: 275 SSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV--CNALVTLYSRLGNFIPAEQVFNAM 332

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D VS+N++I G +  G  ++A +L  +M L   ++PD  TV +L+S C+    L  G
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDKALELFKKMCL-DCLKPDCVTVASLLSACSSVGALLVG 391

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +  H YAI+  +  D+++  +L+D Y K + +  A   F +    N +V WN M+     
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN-VVLWNVMLVAYGL 450

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +F +M     + +  T  +IL +C+S  +++ G+ IH   LK GF  N   
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYV 510

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            + L+ MY   G L  A  + +R+    D   W  +I    Q+  F EA+  FK M Q Q
Sbjct: 511 SSVLIDMYAKLGKLDHALKIFRRLKEK-DVVSWTAMIAGYAQHEKFAEALNLFKEM-QDQ 568

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
               D++   + ISAC  ++   +G+ +H  A  S    D  V NAL+++Y RC  ++ A
Sbjct: 569 GIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDA 628

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQL 582
              F+  ++ +  +WN +IS F+Q+     AL LF  +     EI+  +    +SA   +
Sbjct: 629 YFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMI 627
             ++ GKQIH  +   G    + +S+ L+ +Y+ C               K+  +W++M+
Sbjct: 689 ANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAML 748

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           + Y  HG G++A+ LF +M   G+ P   + + +LSACSH GLVDEG++Y+ +M E + +
Sbjct: 749 TGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGL 808

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
            P+ EH+ C+VD+LGRSG L  A  F++ +PIQP   V   +LSAC  H +  +G+  A 
Sbjct: 809 VPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAAS 868

Query: 748 LLFKLEPENVGYYISLSNMYVALGRW 773
            L +LEP++   Y+ LSNMY   G+W
Sbjct: 869 HLLELEPKDSATYVLLSNMYAVTGKW 894



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 186/713 (26%), Positives = 327/713 (45%), Gaps = 41/713 (5%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           G++F   M E G+R +S T L ++           G  +H   +K G  A+  LC   ++
Sbjct: 52  GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           +Y   GDL+ +   F  M       WN ++   +      + L  FR M     + D  +
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171

Query: 177 LSSAVAASACLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            +  +      G++ +  V  IHA  I  GYE+S +  V N LI +Y + G + +A++ F
Sbjct: 172 YAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLF--VCNPLIDLYFKNGFLNSAKKVF 228

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
            G+  +D VSW A++ G + +G  EEA  L  +M     V P      +++S C      
Sbjct: 229 DGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH-TSGVYPTPYIFSSVLSACTKVEFY 287

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           + G  +HG  +++    +  + N+L+  YS+  +   AE +FNA+    D VS+NS+ISG
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML-QRDEVSYNSLISG 346

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       LFK+M   C +    T+ ++L +C+S  +L  GK  H + +K G S++
Sbjct: 347 LSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSD 406

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            I   AL+ +Y+ C D+  A       +   +   WN+++VA     +  E+ K F  M 
Sbjct: 407 IILEGALLDLYVKCSDIKTAHEFFLS-TETENVVLWNVMLVAYGLLDNLNESFKIFTQM- 464

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q +   P+  T  +++  C +L     G+ +H   LK+    +  V + LI MY +   +
Sbjct: 465 QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKL 524

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A  +F      ++ +W  MI+ ++Q++    AL LF+ ++      + I   S +SAC
Sbjct: 525 DHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISAC 584

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
             +  L  G+QIH      G+ ++  + +AL+ +Y+ C               K N +W+
Sbjct: 585 AGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWN 644

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           S+IS +   G   EA+ LF +M  +G      +    +SA ++   V  G Q +  M+ +
Sbjct: 645 SLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIH-AMIIK 703

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                ETE    ++ +  + G + +A      +P +     W AML+  S HG
Sbjct: 704 TGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAMLTGYSQHG 755



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 252/520 (48%), Gaps = 29/520 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF        +L+T YS +  F  +  +F     +D V++N++I+   +       L  
Sbjct: 300 QGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALEL 359

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  + ++ D  T+  ++SA + +  L  G+  H  +IKAGM +D  L    +++Y K
Sbjct: 360 FKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVK 419

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMS--GCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           C D+ ++   F      + V WN ++   G L N    +    F +M   G + +  +  
Sbjct: 420 CSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN--LNESFKIFTQMQMEGIEPNQFTYP 477

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S +   + L  +  G+ IH   +K G++ + YVS  + LI MY++ G ++ A + F  + 
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKLGKLDHALKIFRRLK 535

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVVSW A+I G+A + KF EA +L  EMQ  + +  D     + IS CA    L +G+
Sbjct: 536 EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ-DQGIHSDNIGFASAISACAGIQALNQGQ 594

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
            +H  A       DL + N+L+  Y++   +  A   F+ I    D +SWNS+ISG  + 
Sbjct: 595 QIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFS-KDNISWNSLISGFAQS 653

Query: 358 ----EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
               E L L SQ S +       T    + +  +  +++ GK IH   +K G  + T   
Sbjct: 654 GHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVS 713

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N L+ +Y  CG++  A      +   ++ S WN ++   +Q+GH  +A+  F+ M +Q  
Sbjct: 714 NVLITLYAKCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQHGHGFKALSLFEDM-KQLG 771

Query: 467 ASPDSVTLVNVISACGNLELAFEG-------KSLHGLALK 499
             P+ VT V V+SAC ++ L  EG       + +HGL  K
Sbjct: 772 VLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPK 811


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 247/799 (30%), Positives = 408/799 (51%), Gaps = 49/799 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y        ++ +F E  N+ V +WN MI   V  +        F  M+ EGI  
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 72  DSTTLLIIVSALT----QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           +  T   ++ A        N +KQ   VH  +   G  +   + N+ +++Y+K G + S+
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQ---VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F+ +   D V+W  ++SG   N   E+ +L F +M  S        LSS ++AS  +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                G+ +H L IK G+    YV   N L+++YS+   + +AER F  M  +D VS+N+
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYV--CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G    G  + A +L  +MQ    ++PD  TV +L+S CA    L +G  +H +AI+ 
Sbjct: 333 LISGLVQQGFSDRALELFTKMQ-RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA 391

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  D+++  SL+D YSK   +  A   F      N +V WN M+              +
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLXTETEN-IVLWNVMLVAYGQLDNLSDSFEI 450

Query: 356 FKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F++M     + +QF++ +   IL +C S  +L  G+ IH   +K GF  N    + L+ M
Sbjct: 451 FRQMQMEGMIPNQFTYPS---ILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G L  A  +L+R+  + D   W  +I    Q+  F EA++ F+ M + +    D++
Sbjct: 508 YAKYGQLALALRILRRLPED-DVVSWTAMIAGYVQHDMFSEALQLFEEM-EYRGIQFDNI 565

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
              + ISAC  +    +G+ +H  +  +  G D  + NALI++Y RC  I+ A   FE  
Sbjct: 566 GFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKI 625

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
            + N  +WN ++S  +Q+     AL++F  +   E E N  +  S +SA   L  ++ G+
Sbjct: 626 GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQ 685

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHG 634
           QIH  V   G+     +S++L+ +Y+   S +               +W++MI+ Y  HG
Sbjct: 686 QIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHG 745

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G EA+ LF EM   GI P   + + +LSACSH GLV EGL Y+ +M + +D+ P++EH+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHY 805

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           VC+VD+LGR+G+L  A E+IK +PI     +W  +LSAC  H + ++G++ A  L +LEP
Sbjct: 806 VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEP 865

Query: 755 ENVGYYISLSNMYVALGRW 773
           E+   Y+ +SN+Y    +W
Sbjct: 866 EDSATYVLISNIYAVSRQW 884



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 197/745 (26%), Positives = 365/745 (48%), Gaps = 52/745 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    +  L+  YS   Y ES+  +F   C KD+VTW AMI+   +N      +  F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    I      L  ++SA T++   + G  +HCL IK G  +++ +CN  V +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L S+E  FS M+  D VS+N+++SG +   + ++ L  F +M     + D ++++S +
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +G L  G  +H+  IK G   S  + +  SL+ +YS+C D+E A + F     ++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGM--SADIILEGSLLDLYSKCADVETAHKFFLXTETEN 427

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V WN ++  +       ++F++  +MQ M  + P+  T  +++  C     L  G  +H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQ-MEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + I+     ++ + + L+D Y+K   L+ A  +   + P +D+VSW +MI+G       
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL-PEDDVVSWTAMIAGYVQHDMF 545

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM Y   QF      + + +C    +L  G+ IH      GF  +    NAL
Sbjct: 546 SEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNAL 605

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  CG +  A+   ++I   ++ S WN ++    Q+G+F+EA++ F  M + + A  
Sbjct: 606 ISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTE-AEV 663

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  T  + ISA  +L    +G+ +H + LK+    +  V N+LI++Y +   I  A   F
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                 N+ +WN MI+ +SQ+   + AL LF  ++     PN ++ V +LSAC+ +G+++
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G         L + E+ F       ++     +  +  ++   G  G+   A+E   EM
Sbjct: 784 EG---------LDYFESMF------KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM 828

Query: 647 CNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLG 702
                 P  +  +   +LLSAC     ++ G +  +++LE   + PE +  +V I ++  
Sbjct: 829 ------PIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE---LEPEDSATYVLISNIYA 879

Query: 703 RSGK---LQEAYEFIKNLPIQPKPG 724
            S +      + + +K+  ++ +PG
Sbjct: 880 VSRQWIHRDWSRKLMKDXGVKKEPG 904



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/708 (25%), Positives = 324/708 (45%), Gaps = 45/708 (6%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E G+R +    L ++        L +   +HC   K+G   +  L +  V+ Y + GD
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            + +   F         SWN ++   +      +    FR M   G   +  + +  +  
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL-- 166

Query: 184 SACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            AC+G     +Y K +H+     G++ SP V+  N LI +YS+ G IE+A++ F  +  K
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA--NLLIDLYSKNGYIESAKKVFNCICMK 224

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W A+I G + NG  EEA  L  +M     + P    + +++S      L   G  +
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMH-ASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+     +  + N L+  YS+S  L  AE +F+ +    D VS+NS+ISG      
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGF 342

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M   C +    T+ ++L +C S  +L  G  +H   +K G S + I   +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  C D+  A       +   +   WN+++VA  Q  +  ++ + F+ M Q +   
Sbjct: 403 LLDLYSKCADVETAHKFF-LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM-QMEGMI 460

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  T  +++  C +L   + G+ +H   +K+   L+  V + LI MY +   +  A  +
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
                  ++ +W  MI+ + Q+     AL+LF  +E+   + + I   S +SAC  +  L
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           R G+QIH   +  GF  +  I++AL+ +Y+ C               K+N +W+S++S  
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRP 689
              G   EA+++F  M  +       +  S +SA +    + +G Q ++ +L+  YD   
Sbjct: 641 AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           E  +   ++ +  +SG + +A+    ++  +     W AM++  S HG
Sbjct: 701 EVSN--SLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 204/467 (43%), Gaps = 57/467 (12%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           ++   L +L  C +  SL     +HC   K GF    + +++L+  Y   GD   A  + 
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116

Query: 427 QRISHNSDTSCWNIVI-VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              S+ S  S WN +I V   Q  +FQ     F+ M   +  +P+  T   V+ AC   +
Sbjct: 117 DENSNRSVFS-WNKMIHVFVAQKSNFQ-VFCLFRRML-AEGITPNGYTFAGVLKACVGGD 173

Query: 486 LAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +AF   K +H             V N LI +Y +   I+SA  VF      ++ TW  MI
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMI 233

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S  SQN  E  A+ LF  +   E  P    + S+LSA T++ +   G+Q+H  V   GF 
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293

Query: 602 ENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
             +++ + L+ +YS               N +   +++S+IS     G    A+ELF +M
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE----------------------- 683
               ++P   +V SLLSAC+  G + +G+Q +++ ++                       
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV 413

Query: 684 ----EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSAC 733
               ++ +  ETE+ V    ML   G+   L +++E  + + ++   P    + ++L  C
Sbjct: 414 ETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473

Query: 734 SHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDAVEI 779
           +  G   +G+Q+   + K   + NV     L +MY   G+   A+ I
Sbjct: 474 TSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 247/799 (30%), Positives = 408/799 (51%), Gaps = 49/799 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y        ++ +F E  N+ V +WN MI   V  +        F  M+ EGI  
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 72  DSTTLLIIVSALT----QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           +  T   ++ A        N +KQ   VH  +   G  +   + N+ +++Y+K G + S+
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQ---VHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F+ +   D V+W  ++SG   N   E+ +L F +M  S        LSS ++AS  +
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                G+ +H L IK G+    YV   N L+++YS+   + +AER F  M  +D VS+N+
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYV--CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G    G  + A +L  +MQ    ++PD  TV +L+S CA    L +G  +H +AI+ 
Sbjct: 333 LISGLVQQGFSDRALELFTKMQ-RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA 391

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  D+++  SL+D YSK   +  A   F      N +V WN M+              +
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLTTETEN-IVLWNVMLVAYGQLDNLSDSFEI 450

Query: 356 FKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F++M     + +QF++ +   IL +C S  +L  G+ IH   +K GF  N    + L+ M
Sbjct: 451 FRQMQMEGMIPNQFTYPS---ILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDM 507

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G L  A  +L+R+  + D   W  +I    Q+  F EA++ F+ M + +    D++
Sbjct: 508 YAKYGQLALALRILRRLPED-DVVSWTAMIAGYVQHDMFSEALQLFEEM-EYRGIQFDNI 565

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
              + ISAC  +    +G+ +H  +  +  G D  + NALI++Y RC  I+ A   FE  
Sbjct: 566 GFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKI 625

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
            + N  +WN ++S  +Q+     AL++F  +   E E N  +  S +SA   L  ++ G+
Sbjct: 626 GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQ 685

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHG 634
           QIH  V   G+     +S++L+ +Y+   S +               +W++MI+ Y  HG
Sbjct: 686 QIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHG 745

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G EA+ LF EM   GI P   + + +LSACSH GLV EGL Y+ +M + +D+ P++EH+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHY 805

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           VC+VD+LGR+G+L  A E+IK +PI     +W  +LSAC  H + ++G++ A  L +LEP
Sbjct: 806 VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEP 865

Query: 755 ENVGYYISLSNMYVALGRW 773
           E+   Y+ +SN+Y    +W
Sbjct: 866 EDSATYVLISNIYAVSRQW 884



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 197/745 (26%), Positives = 365/745 (48%), Gaps = 52/745 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    +  L+  YS   Y ES+  +F   C KD+VTW AMI+   +N      +  F
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    I      L  ++SA T++   + G  +HCL IK G  +++ +CN  V +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L S+E  FS M+  D VS+N+++SG +   + ++ L  F +M     + D ++++S +
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +G L  G  +H+  IK G   S  + +  SL+ +YS+C D+E A + F     ++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGM--SADIILEGSLLDLYSKCADVETAHKFFLTTETEN 427

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V WN ++  +       ++F++  +MQ M  + P+  T  +++  C     L  G  +H
Sbjct: 428 IVLWNVMLVAYGQLDNLSDSFEIFRQMQ-MEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + I+     ++ + + L+D Y+K   L+ A  +   + P +D+VSW +MI+G       
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL-PEDDVVSWTAMIAGYVQHDMF 545

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM Y   QF      + + +C    +L  G+ IH      GF  +    NAL
Sbjct: 546 SEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNAL 605

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  CG +  A+   ++I   ++ S WN ++    Q+G+F+EA++ F  M + + A  
Sbjct: 606 ISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYFEEALQVFVRMLRTE-AEV 663

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  T  + ISA  +L    +G+ +H + LK+    +  V N+LI++Y +   I  A   F
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF 723

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                 N+ +WN MI+ +SQ+   + AL LF  ++     PN ++ V +LSAC+ +G+++
Sbjct: 724 NDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVK 783

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G         L + E+ F       ++     +  +  ++   G  G+   A+E   EM
Sbjct: 784 EG---------LDYFESMF------KIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEM 828

Query: 647 CNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLG 702
                 P  +  +   +LLSAC     ++ G +  +++LE   + PE +  +V I ++  
Sbjct: 829 ------PIPADAMIWRTLLSACVIHKNIEIGERAAHHLLE---LEPEDSATYVLISNIYA 879

Query: 703 RSGK---LQEAYEFIKNLPIQPKPG 724
            S +      + + +K+  ++ +PG
Sbjct: 880 VSRQWIHRDWSRKLMKDRGVKKEPG 904



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 177/708 (25%), Positives = 324/708 (45%), Gaps = 45/708 (6%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E G+R +    L ++        L +   +HC   K+G   +  L +  V+ Y + GD
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            + +   F         SWN ++   +      +    FR M   G   +  + +  +  
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVL-- 166

Query: 184 SACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            AC+G     +Y K +H+     G++ SP V+  N LI +YS+ G IE+A++ F  +  K
Sbjct: 167 KACVGGDIAFNYVKQVHSRTFYYGFDSSPLVA--NLLIDLYSKNGYIESAKKVFNCICMK 224

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W A+I G + NG  EEA  L  +M     + P    + +++S      L   G  +
Sbjct: 225 DIVTWVAMISGLSQNGLEEEAILLFCDMH-ASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+     +  + N L+  YS+S  L  AE +F+ +    D VS+NS+ISG      
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGF 342

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M   C +    T+ ++L +C S  +L  G  +H   +K G S + I   +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  C D+  A       +   +   WN+++VA  Q  +  ++ + F+ M Q +   
Sbjct: 403 LLDLYSKCADVETAHKFF-LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM-QMEGMI 460

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  T  +++  C +L   + G+ +H   +K+   L+  V + LI MY +   +  A  +
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
                  ++ +W  MI+ + Q+     AL+LF  +E+   + + I   S +SAC  +  L
Sbjct: 521 LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           R G+QIH   +  GF  +  I++AL+ +Y+ C               K+N +W+S++S  
Sbjct: 581 RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGL 640

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRP 689
              G   EA+++F  M  +       +  S +SA +    + +G Q ++ +L+  YD   
Sbjct: 641 AQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           E  +   ++ +  +SG + +A+    ++  +     W AM++  S HG
Sbjct: 701 EVSN--SLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 204/467 (43%), Gaps = 57/467 (12%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           ++   L +L  C +  SL     +HC   K GF    + +++L+  Y   GD   A  + 
Sbjct: 57  NYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVF 116

Query: 427 QRISHNSDTSCWNIVI-VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              S+ S  S WN +I V   Q  +FQ     F+ M   +  +P+  T   V+ AC   +
Sbjct: 117 DENSNRSVFS-WNKMIHVFVAQKSNFQ-VFCLFRRML-AEGITPNGYTFAGVLKACVGGD 173

Query: 486 LAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +AF   K +H             V N LI +Y +   I+SA  VF      ++ TW  MI
Sbjct: 174 IAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMI 233

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S  SQN  E  A+ LF  +   E  P    + S+LSA T++ +   G+Q+H  V   GF 
Sbjct: 234 SGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFH 293

Query: 602 ENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
             +++ + L+ +YS               N +   +++S+IS     G    A+ELF +M
Sbjct: 294 SETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKM 353

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE----------------------- 683
               ++P   +V SLLSAC+  G + +G+Q +++ ++                       
Sbjct: 354 QRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV 413

Query: 684 ----EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSAC 733
               ++ +  ETE+ V    ML   G+   L +++E  + + ++   P    + ++L  C
Sbjct: 414 ETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473

Query: 734 SHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDAVEI 779
           +  G   +G+Q+   + K   + NV     L +MY   G+   A+ I
Sbjct: 474 TSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/806 (29%), Positives = 420/806 (52%), Gaps = 50/806 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + SL+  Y   +    +L LF +T + +V++WN +I+ C +N         F +M   G 
Sbjct: 84  TNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGF 143

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  T   ++SA T +     G +V+ L++K G  ++  +    ++++AK      +  
Sbjct: 144 DPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALR 203

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  + C + V WN I+SG + N      L  F +M       ++ + SS + A A L E
Sbjct: 204 VFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEE 263

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L +G+ +    IK G  +  +V    ++I +Y++C D++ A + F  M  ++VVSW  II
Sbjct: 264 LEFGRGVQGWVIKCGAGEDVFVG--TAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTII 321

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIA--TVVTLISLCADSLLLREGRSVHGYAIRR 307
            GF        AF    EM   R V   I   T+ ++++ C + ++++E   +H +  + 
Sbjct: 322 SGFVQKDDSISAFHFFKEM---RKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKT 378

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D  + ++L++ YSK   +  +E +F  +    +L  W  MIS             L
Sbjct: 379 GFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVEL 438

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMH 411
           F+ ML       +F  S++L+I+      +SL  G+ IHC+ LK+G F++ ++G ++L  
Sbjct: 439 FQRMLQEGLRPDKFCSSSVLSII------DSLSLGRLIHCYILKIGLFTDISVG-SSLFT 491

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  ++++ +++  + D   W  +I   +++ H ++A++ F+ M  ++   PD 
Sbjct: 492 MYSKCGSLEESYTVFEQMP-DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEE-IRPDQ 549

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +TL   ++AC  L    +GK +HG AL++ +G +  V  AL+ MY +C  I  A  VF+ 
Sbjct: 550 MTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDM 609

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
               +  + + ++S ++QN     AL LF   R  +   +  ++ S++ A   L  L  G
Sbjct: 610 LPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIG 669

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYH 633
            Q+H  V  +G      + S+L+ MYS C S                 +W++MI +Y  H
Sbjct: 670 TQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQH 729

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           GKG EA++++  M   G +P   + + +LSACSH+G+V+EG  + N+M +EY + P   H
Sbjct: 730 GKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYH 789

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+LGRSG+L+EA  FI N+PI+P   +WG +L+AC  HGD ++G+  A+ + +LE
Sbjct: 790 YACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELE 849

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P   G Y++LSN+   +G W+D ++I
Sbjct: 850 PCEAGAYVTLSNICADMGWWEDVMKI 875



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 183/709 (25%), Positives = 348/709 (49%), Gaps = 43/709 (6%)

Query: 89  LKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           L+  +++H   +K  ++ +++ + N  +  Y K   +  +   F      + +SWN ++S
Sbjct: 61  LRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILIS 120

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           GC  N   E     F +M +SG   +  +  S ++A   LG   YG+++++L +K G+  
Sbjct: 121 GCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFS 180

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           + YV     +I ++++    E A R F  + C++VV WNAII G   N +   A DL  +
Sbjct: 181 NGYVRA--GMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQ 238

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M   R   P+  T  ++++ CA    L  GR V G+ I+   G D+ +  +++D Y+K  
Sbjct: 239 M-CCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCR 297

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            + +A   F  + P+ ++VSW ++ISG             FKEM  +  + +  T+ ++L
Sbjct: 298 DMDQAVKEFLRM-PIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVL 356

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C  P  ++    +H W  K GF  ++   +AL++MY   G +  +  + + +    + 
Sbjct: 357 TACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNL 416

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           + W ++I A  Q+G    A++ F+ M  Q+   PD     +V+S   +L L   G+ +H 
Sbjct: 417 AMWAVMISAFAQSGSTGRAVELFQRML-QEGLRPDKFCSSSVLSIIDSLSL---GRLIHC 472

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             LK  +  D  V ++L TMY +C  ++ + TVFE   + +  +W  MI+ FS++    +
Sbjct: 473 YILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQ 532

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A++LFR +   E  P+++++ + L+AC+ L  L  GK++HG+       +   +  AL++
Sbjct: 533 AVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVN 592

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               K   + SS++S Y  +G   +A+ LFHE+  + +     +
Sbjct: 593 MYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFT 652

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           V S++ A +    +D G Q +   + +  +  E      +V M  + G + E ++  + +
Sbjct: 653 VSSVIGAVAILNSLDIGTQLH-ACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQI 711

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISLS 764
             +P    W AM+ + + HG      +V +L+ K   +P++V +   LS
Sbjct: 712 E-KPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLS 759



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 180/604 (29%), Positives = 301/604 (49%), Gaps = 27/604 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++      ++  ++ +  FE +L +F +   ++VV WNA+I+  V+NR   + L  F
Sbjct: 177 GFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLF 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M       +S T   I++A   +  L+ GR V    IK G   D  +    +++YAKC
Sbjct: 237 CQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D++ +   F  M   + VSW TI+SG +  +       +F+EM   GE+ +N +++S +
Sbjct: 297 RDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVL 356

Query: 182 AASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TC 239
            A      +     +H+   K G Y DS   +V+++LI+MYS+ G ++ +ER F  M + 
Sbjct: 357 TACTEPVMIKEAVQLHSWIFKTGFYLDS---NVSSALINMYSKIGVVDLSERVFREMEST 413

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K++  W  +I  FA +G    A +L   M L   + PD     +++S+  DSL L  GR 
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRM-LQEGLRPDKFCSSSVLSII-DSLSL--GRL 469

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H Y ++  L  D+ + +SL   YSK  SL ++  +F  + P  D VSW SMI+G     
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQM-PDKDNVSWASMITGFSEHD 528

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF+EML    +    TL A L +C++  SLE GK +H + L+       +   
Sbjct: 529 HAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGG 588

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL++MY  CG +V A  +   +      SC ++V     QNG+ ++A+  F  + +  + 
Sbjct: 589 ALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLV-SGYAQNGYIEDALLLFHEI-RMADL 646

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             DS T+ +VI A   L     G  LH    K  +  +  V ++L+TMY +C  I     
Sbjct: 647 WIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHK 706

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRAL---ELFRHLEFEPNEISIVSILSACTQLGV 584
           VFE     +L +W  MI +++Q+     AL   +L R    +P+ ++ V +LSAC+  G+
Sbjct: 707 VFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGM 766

Query: 585 LRHG 588
           +  G
Sbjct: 767 VEEG 770



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   +SL T YS     E S  +F +  +KD V+W +MIT   E+      +  F
Sbjct: 478 GLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLF 537

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ E IR D  TL   ++A + ++ L++G+ VH  +++A +  +  +    VNMY+KC
Sbjct: 538 REMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKC 597

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   D  S ++++SG   N Y E  LL F E+  +    D+ ++SS +
Sbjct: 598 GAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVI 657

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  G  +HA   K+G   +  VSV +SL++MYS+CG I+   + F  +   D
Sbjct: 658 GAVAILNSLDIGTQLHACVTKMGL--NAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPD 715

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW A+I  +A +GK  EA   ++++      +PD  T V ++S C+ + ++ EG S H
Sbjct: 716 LISWTAMIVSYAQHGKGAEALK-VYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYS-H 773

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             ++ +  G +        ++D   +S  L +AE   N +    D + W  +++ 
Sbjct: 774 LNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAA 828


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/723 (32%), Positives = 377/723 (52%), Gaps = 41/723 (5%)

Query: 92  GRVVH-CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           GR +H  +S       D  L    V MY+ C     S   F+     +   WN ++SG L
Sbjct: 112 GRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYL 171

Query: 151 HNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
            N+     +  F EM    E   DN +L   + A   + ++  G+ +H   +K       
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDV 231

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM- 268
           +V   N+LI+MY + G +E+A + F  M  +++VSWN+++     NG FEE++ L   + 
Sbjct: 232 FVG--NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
                + PD+AT+VT+I LCA    +R G   HG A++  L  +L + +SL+D YSK   
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS--------TLLAIL 375
           L +A +LF+      +++SWNSMI G      F+    L  +            TLL +L
Sbjct: 350 LCEARVLFDTNE--KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVL 407

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           P C         K IH + L+ GF  ++ +  NA +  Y  CG L  A  +   +  +  
Sbjct: 408 PVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGME-SKM 466

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
            S WN +I    QNG  ++A+  +  M +     PD  T+ +++SAC  L+    GK +H
Sbjct: 467 VSSWNALIGGHVQNGFPRKALDLYLLM-RGSGLEPDLFTIASLLSACARLKSLSCGKEIH 525

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           G  L++   LD  +  +L+++Y +C  I  A   F++    NL  WN MI+ FSQN+   
Sbjct: 526 GSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPF 585

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL++F  +   +  P+EISI+  L AC+Q+  LR GK++H         E+SF++ +L+
Sbjct: 586 DALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLI 645

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C               K    W+ +I+ YG HG G +AIELF  M N+G RP   
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSV 705

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + I+LL+AC+H+GLV EGL+Y   M   + ++P+ EH+ C+VDMLGR+G+L EA E +  
Sbjct: 706 TFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNE 765

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           LP +P   +W ++LS+C ++ D  +G++VA  L +L P+    Y+ +SN Y  LG+W + 
Sbjct: 766 LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEV 825

Query: 777 VEI 779
            ++
Sbjct: 826 RKM 828



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 199/737 (27%), Positives = 361/737 (48%), Gaps = 50/737 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGI 69
           T L+T YS       S  +F  +  K++  WNA+++  + N      +  F EM+     
Sbjct: 133 TRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEF 192

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D+ TL  ++ A   +  ++ G  VH  ++K  +++D  + N  + MY K G + S+  
Sbjct: 193 VPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVK 252

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVSLSSAVAASACL 187
            F  M   + VSWN++M  CL N   E+    F+ +  G  G   D  ++ + +   A  
Sbjct: 253 VFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQ 312

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           GE+  G V H L +KLG      + V +SL+ MYS+CG +  A R  +    K+V+SWN+
Sbjct: 313 GEVRLGMVFHGLALKLGL--CGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNS 369

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G++ +  F  AF+LL +MQ+   V+ +  T++ ++ +C + +   + + +HGYA+R 
Sbjct: 370 MIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRH 429

Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM------- 359
             +  D L+ N+ +  Y+K  SL  AE +F  +     + SWN++I G  +         
Sbjct: 430 GFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMES-KMVSSWNALIGGHVQNGFPRKALD 488

Query: 360 LYLCSQFS-----FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LYL  + S       T+ ++L +C   +SL  GK IH   L+ GF  +     +L+ +Y+
Sbjct: 489 LYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYV 548

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG ++ A      +    +  CWN +I   +QN    +A+  F  M   +   PD +++
Sbjct: 549 QCGKILLAKLFFDNMEE-KNLVCWNTMINGFSQNEFPFDALDMFHQMLSSK-IWPDEISI 606

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           +  + AC  +     GK LH  A+KS +   + V  +LI MY +C  ++ +  +F+  + 
Sbjct: 607 IGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL 666

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
               TWN +I+ +  +    +A+ELF+ ++   F P+ ++ +++L+AC   G++  G + 
Sbjct: 667 KGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLE- 725

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                +LG  ++ F     L+ Y         + ++   G  G+  EA+EL +E+ +   
Sbjct: 726 -----YLGQMQSLFGIKPKLEHY---------ACVVDMLGRAGRLNEALELVNELPD--- 768

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEA 710
           +P      SLLS+C +   +D G +  N +LE   + P+  E++V I +   R GK  E 
Sbjct: 769 KPDSRIWSSLLSSCRNYRDLDIGEKVANKLLE---LGPDKAENYVLISNFYARLGKWDEV 825

Query: 711 YEF---IKNLPIQPKPG 724
            +    +K + +Q   G
Sbjct: 826 RKMRQRMKEIGLQKDAG 842



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 294/615 (47%), Gaps = 59/615 (9%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L+ +    +L+  Y    + ES++ +F +   +++V+WN+++ AC+EN         F  
Sbjct: 228 LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKG 287

Query: 64  MV--EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           ++  +EG+  D  T++ ++    +   ++ G V H L++K G+  +  + +  ++MY+KC
Sbjct: 288 LLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKC 347

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
           G L  +   F   +  + +SWN+++ G   +          R+M    + + + V+L + 
Sbjct: 348 GYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNV 406

Query: 181 VAASACLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +    C  E+ + K+  IH   ++ G+  S  + V N+ ++ Y++CG +  AE  F GM 
Sbjct: 407 LP--VCEEEIQFLKLKEIHGYALRHGFIQSDEL-VANAFVAGYAKCGSLHYAEGVFCGME 463

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLRE 296
            K V SWNA+I G   NG   +A DL     LMR   +EPD+ T+ +L+S CA    L  
Sbjct: 464 SKMVSSWNALIGGHVQNGFPRKALDL---YLLMRGSGLEPDLFTIASLLSACARLKSLSC 520

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ +HG  +R     D  +  SL+  Y +   +  A+L F+ +   N LV WN+MI+G  
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKN-LVCWNTMINGFS 579

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     +F +ML         +++  L +C+   +L  GK +HC+ +K   + ++ 
Sbjct: 580 QNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSF 639

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +L+ MY  CG +  + ++  R+ H      WN++I     +GH ++AI+ FKSM Q 
Sbjct: 640 VTCSLIDMYAKCGCMEQSQNIFDRV-HLKGEVTWNVLITGYGIHGHGRKAIELFKSM-QN 697

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
               PDSVT + +++AC +  L  EG    G  ++SL G+  ++++              
Sbjct: 698 AGFRPDSVTFIALLTACNHAGLVAEGLEYLG-QMQSLFGIKPKLEH-------------- 742

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV 584
                          + C++    +      ALEL   L  +P+     S+LS+C     
Sbjct: 743 ---------------YACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRD 787

Query: 585 LRHGKQIHGHVFHLG 599
           L  G+++   +  LG
Sbjct: 788 LDIGEKVANKLLELG 802



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 228/469 (48%), Gaps = 40/469 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ++SLL  YS   Y   +  LF +T  K+V++WN+MI    ++R         
Sbjct: 329 GLCGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELL 387

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYA 119
            +M +E+ ++ +  TLL ++    +     + + +H  +++ G I +D  + N FV  YA
Sbjct: 388 RKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYA 447

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L+ +E  F GM      SWN ++ G + N +P K L  +  M  SG + D  +++S
Sbjct: 448 KCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIAS 507

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A A L  LS GK IH   ++ G+E   ++ +  SL+S+Y QCG I  A+  F  M  
Sbjct: 508 LLSACARLKSLSCGKEIHGSMLRNGFELDEFICI--SLVSLYVQCGKILLAKLFFDNMEE 565

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K++V WN +I+GF+ N    +A D+ H+M L   + PD  +++  +  C+    LR G+ 
Sbjct: 566 KNLVCWNTMINGFSQNEFPFDALDMFHQM-LSSKIWPDEISIIGALGACSQVSALRLGKE 624

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H +A++  L     +  SL+D Y+K   + +++ +F+ +  +   V+WN +I+G     
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVH-LKGEVTWNVLITGYGIHG 683

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNT 403
                  LFK M     +    T +A+L +CN      E LE+          LG   + 
Sbjct: 684 HGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEY----------LGQMQSL 733

Query: 404 IGVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+   +  Y          G L  A  L+  +    D+  W+ ++ +C
Sbjct: 734 FGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSC 782


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/795 (29%), Positives = 408/795 (51%), Gaps = 43/795 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y  +   +  + +F +  N+ V +W+ +I+  +E +     L  F  M+EE +   
Sbjct: 51  LVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPT 110

Query: 73  STTLLIIVSALTQMNC-LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
             +   ++ A +     ++    +H   I  G++    + N  + +YAK G + S+   F
Sbjct: 111 EISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVF 170

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D+VSW  ++SG   N Y E+ +  F EM  +G        SS ++    +    
Sbjct: 171 DNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFD 230

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HAL  K G     YV   N+L+++YS+  +  +AE+ F  M  KD VS+N++I G
Sbjct: 231 VGEQLHALVFKYGSSLETYV--CNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISG 288

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A  G  + A +L  +M+    ++PD  TV +L+S CA +  L +G  +H Y I+  +  
Sbjct: 289 LAQQGFSDGALELFTKMK-RDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISS 347

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+++  +L+D Y   + +  A  +F   A   ++V WN M+              +F++M
Sbjct: 348 DMIVEGALLDLYVNCSDIKTAHEMF-LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM 406

Query: 360 L---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                + +QF++ +   IL +C S  +L+ G+ IH   +K GF  N    + L+ MY   
Sbjct: 407 QIKGLIPNQFTYPS---ILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  +L+ ++ + D   W  +I    Q+  F EA+K FK M  +   S D++   +
Sbjct: 464 GKLDTAHVILRTLTED-DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQS-DNIGFSS 521

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            ISAC  ++   +G+ +H  +  S    D  + NAL+++Y RC  IK A   FE     +
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
             +WN +IS F+Q+     AL++F  +   + E +  +  S +SA   +  ++ GKQIH 
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +   GF  +  +S+AL+  Y+ C               K++ +W++MI+ Y  HG G E
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNE 701

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+ LF +M   G  P   + + +LSACSH GLV +GL Y+ +M +E+ + P+  H+ C+V
Sbjct: 702 AVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVV 761

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D++ R+G L  A +FI+ +PI+P   +W  +LSAC+ H + ++G+  A+ L +LEPE+  
Sbjct: 762 DLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSA 821

Query: 759 YYISLSNMYVALGRW 773
            Y+ LSNMY   G+W
Sbjct: 822 TYVLLSNMYAVSGKW 836



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 200/742 (26%), Positives = 345/742 (46%), Gaps = 46/742 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L     S  L+  Y+      S+  +F   C KD V+W AMI+   +N      +H F
Sbjct: 142 GLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLF 201

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   GI         ++S  T++     G  +H L  K G   ++ +CN  V +Y++ 
Sbjct: 202 CEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRM 261

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +  S+E  FS M   D VS+N+++SG     + +  L  F +M     + D V+++S +
Sbjct: 262 PNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLL 321

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A  G L  G+ +H+  IK G   S  + V  +L+ +Y  C DI+ A   F     ++
Sbjct: 322 SACASNGALCKGEQLHSYVIKAGI--SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV WN ++  F       E+F +  +MQ+ + + P+  T  +++  C     L  G  +H
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQI-KGLIPNQFTYPSILRTCTSVGALDLGEQIH 438

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              I+    +++ + + L+D Y+K   L  A ++   +   +D+VSW ++ISG       
Sbjct: 439 TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE-DDVVSWTALISGYAQHNLF 497

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 FKEML    Q       + + +C   ++L  G+ IH      G+S +    NAL
Sbjct: 498 AEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNAL 557

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  CG +  A+   ++I    D+  WN +I    Q+G+ ++A+K F  M + +    
Sbjct: 558 VSLYARCGRIKEAYLEFEKID-AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAK-LEA 615

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              T  + +SA  N+    +GK +H + +K     D  V NALIT Y +C  I+ A   F
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
                 N  +WN MI+ +SQ+     A+ LF  ++     PN ++ V +LSAC+ +G++ 
Sbjct: 676 CEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVT 735

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G         LG+ E+      L+   ++    A    +IS  G+  +  + IE   EM
Sbjct: 736 KG---------LGYFESMSKEHGLVPKPAH---YACVVDLISRAGFLSRARKFIE---EM 780

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSG 705
               I P  +   +LLSAC+    V+ G     ++LE   + PE +  +V + +M   SG
Sbjct: 781 ---PIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLE---LEPEDSATYVLLSNMYAVSG 834

Query: 706 K---LQEAYEFIKNLPIQPKPG 724
           K     +  + ++N  ++ +PG
Sbjct: 835 KWDCRDQTRQMMRNRGVKKEPG 856



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 179/704 (25%), Positives = 322/704 (45%), Gaps = 51/704 (7%)

Query: 88  CLKQGRVVHCLSI-----KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
           CL  G +V C  +     K G   +S LCN  V++Y   GDL+     F  M      SW
Sbjct: 20  CLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSW 79

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE---LSYGKVIHAL 199
           + I+SG +      + L  F  M    E      +S A    AC G    + Y + IHA 
Sbjct: 80  DKIISGFMEKKMSNRVLDLFSCM--IEENVSPTEISFASVLRACSGHRIGIRYAEQIHAR 137

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            I  G   SP +S  N LI +Y++ G I +A + F  +  KD VSW A+I GF+ NG  E
Sbjct: 138 IICHGLLCSPIIS--NPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEE 195

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA  L  EM     + P      +++S C    L   G  +H    +     +  + N+L
Sbjct: 196 EAIHLFCEMH-TAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +  YS+  +   AE +F+ +    D VS+NS+ISG            LF +M     +  
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQS-KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T+ ++L +C S  +L  G+ +H + +K G S++ I   AL+ +Y+NC D+  A  +  
Sbjct: 314 CVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF- 372

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             +   +   WN+++VA  +  +  E+ + F+ M Q +   P+  T  +++  C ++   
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM-QIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G+ +H   +K+    +  V + LI MY +   + +A  +  +    ++ +W  +IS +
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +Q+     AL+ F+ +     + + I   S +SAC  +  L  G+QIH   +  G+ E+ 
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I +AL+ +Y+ C               K + +W+ +IS +   G   +A+++F +M  +
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRA 611

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            +  +  +  S +SA ++   + +G Q +  M+ +     + E    ++    + G +++
Sbjct: 612 KLEASFFTFGSAVSAAANIANIKQGKQIH-AMIIKRGFDSDIEVSNALITFYAKCGSIED 670

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           A      +P +     W AM++  S HG    G +   L  K++
Sbjct: 671 ARREFCEMP-EKNDVSWNAMITGYSQHG---YGNEAVNLFEKMK 710



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 253/534 (47%), Gaps = 54/534 (10%)

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           R +  +  T + L+ LC +S  L E + +HG  ++   G + ++ N L+D Y     L  
Sbjct: 4   RGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDG 63

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLC--------SQFSFSTLLAILP 376
              +F  + P   + SW+ +ISG  ++        L+ C        ++ SF++   +L 
Sbjct: 64  VVKVFEDM-PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFAS---VLR 119

Query: 377 SCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           +C+     + + + IH   +  G   + I  N L+ +Y   G +++A  +   +    D+
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDS 178

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W  +I   +QNG+ +EAI  F  M       P      +V+S C  ++L   G+ LH 
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEM-HTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHA 237

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           L  K    L+T V NAL+T+Y R  +  SA  VF    + +  ++N +IS  +Q      
Sbjct: 238 LVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDG 297

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           ALELF  ++    +P+ +++ S+LSAC   G L  G+Q+H +V   G   +  +  ALLD
Sbjct: 298 ALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLD 357

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           +Y NC               ++   W+ M+ A+G      E+  +F +M   G+ P + +
Sbjct: 358 LYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVC--IVDMLGRSGKLQEAYE 712
             S+L  C+  G +D G Q +  +++   +++V      +VC  ++DM  + GKL  A+ 
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV------YVCSVLIDMYAKHGKLDTAHV 471

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHG-DTKMGKQVAELLFK-LEPENVGYYISLS 764
            ++ L  +     W A++S  + H    +  K   E+L + ++ +N+G+  ++S
Sbjct: 472 ILRTLT-EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 200/460 (43%), Gaps = 55/460 (11%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T + +L  C +  SL   K +H   LKLGF N ++  N L+ +Y   GDL     + + +
Sbjct: 12  TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
            + S  S W+ +I    +       +  F  M  ++N SP  ++  +V+ AC    +   
Sbjct: 72  PNRSVRS-WDKIISGFMEKKMSNRVLDLFSCMI-EENVSPTEISFASVLRACSGHRIGIR 129

Query: 490 -GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
             + +H   +   +     + N LI +Y +   I SA  VF++    +  +W  MIS FS
Sbjct: 130 YAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFS 189

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           QN  E  A+ LF  +      P      S+LS CT++ +   G+Q+H  VF  G    ++
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249

Query: 606 ISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + +AL+ +YS                 K   +++S+IS     G    A+ELF +M    
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE--------------------------- 683
           ++P   +V SLLSAC+ +G + +G Q ++ +++                           
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369

Query: 684 EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHG 737
           E  +  +TE+ V    ML   G+   L E++   + + I+   P    + ++L  C+  G
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429

Query: 738 DTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDA 776
              +G+Q+   + K   +   Y  S L +MY   G+   A
Sbjct: 430 ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA 469



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF + +  S +L+T Y+     E +   F E   K+ V+WNAMIT   ++      ++ 
Sbjct: 646 RGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNL 705

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M + G   +  T + ++SA + +  + +G      +S + G++   +     V++ +
Sbjct: 706 FEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLIS 765

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           + G L+ +      M    D   W T++S C +H N
Sbjct: 766 RAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKN 801


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 243/804 (30%), Positives = 421/804 (52%), Gaps = 38/804 (4%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
            + +L+  YS     E +  +F E  +++  +W+ M++  V        +  F +M   G+
Sbjct: 782  TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 841

Query: 70   RFDSTTLLIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              +   +  +++A ++   +  +G  VH   +K G++ D  +    V+ Y   G + +++
Sbjct: 842  EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 901

Query: 129  CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
              F  M   + VSW ++M G   +  P + L  ++ M   G   +  + ++  ++   L 
Sbjct: 902  KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE 961

Query: 189  ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +   G  +    I+ G+EDS  VSV NSLISM+S    +E A   F  M   D++SWNA+
Sbjct: 962  DQVLGYQVLGHIIQYGFEDS--VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 1019

Query: 249  IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
            I  +A +G   E+    H M+ + + E +  T+ +L+S+C+    L+ GR +HG  ++  
Sbjct: 1020 ISAYAHHGLCRESLRCFHWMRHLHN-ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 1078

Query: 309  LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
            L  ++ + N+L+  YS++     AEL+F A+    DL+SWNSM++             + 
Sbjct: 1079 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDGLKIL 1137

Query: 357  KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
             E+L +    +  T  + L +C++PE L   K +H   +  GF +  I  NAL+ MY   
Sbjct: 1138 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 1197

Query: 417  GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            G ++ A  +LQ +    D   WN +I    +N    EA+K +K + +++    + +T+V+
Sbjct: 1198 GMMMEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVS 1255

Query: 477  VISACGNLE-LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
            V+ AC   + L   G  +H   + +    D  V+N+LITMY +C D+ S++ +F+   N 
Sbjct: 1256 VLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK 1315

Query: 536  NLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
            +  TWN M++A + +     AL++F   R++    ++ S    L+A   L VL  G+Q+H
Sbjct: 1316 SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLH 1375

Query: 593  GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
            G V  LGF+ +  +++A +DMY  C               +S  +W+ +ISA+  HG   
Sbjct: 1376 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 1435

Query: 638  EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
            +A E FHEM   G +P   + +SLLSAC+H GLVDEGL YY++M  E+ V P  EH VCI
Sbjct: 1436 KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCI 1495

Query: 698  VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            +D+LGRSG+L  A  FIK +P+ P    W ++L+AC  HG+ ++ ++ AE L +L+P + 
Sbjct: 1496 IDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDD 1555

Query: 758  GYYISLSNMYVALGRWKDAVEIGK 781
              Y+  SN+    G+W+D   + K
Sbjct: 1556 SAYVLYSNVCATSGKWEDVENLRK 1579



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 186/714 (26%), Positives = 348/714 (48%), Gaps = 52/714 (7%)

Query: 80   VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
            +   +++     G+ +H   I   +       N  +NMY+K G++  +   F  M   + 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 140  VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS-YGKVIHA 198
             SW+T++SG +     E+ +  F +M   G + +   ++S + A +  G ++  G  +H 
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 199  LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
              +K G     YV    +L+  Y   G +  A++ F  M   +VVSW +++ G++ +G  
Sbjct: 871  FVVKTGILGDVYVGT--ALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 928

Query: 259  EEAFDLLHEMQL--MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
             E  ++   M+   +   +   ATV +   L  D +L   G  V G+ I+      + + 
Sbjct: 929  GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL---GYQVLGHIIQYGFEDSVSVA 985

Query: 317  NSLMDFYSKSNSLSKAELLFNAIAPMN--DLVSWNSMIS-----GLFKE-------MLYL 362
            NSL+  +S  +S+ +A  +F+    MN  D++SWN+MIS     GL +E       M +L
Sbjct: 986  NSLISMFSSFSSVEEACYVFDH---MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042

Query: 363  CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             ++ + +TL ++L  C+S ++L++G+ IH   +KLG  +N    N L+ +Y   G    A
Sbjct: 1043 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 1102

Query: 423  FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
              + Q ++   D   WN ++    Q+G   + +K    + Q      + VT  + ++AC 
Sbjct: 1103 ELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACS 1160

Query: 483  NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            N E   E K +H L + +       V NAL+TMYG+   +  A  V ++    +  TWN 
Sbjct: 1161 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 1220

Query: 543  MISAFSQNKAE---VRALELFRHLEFEPNEISIVSILSACTQL-GVLRHGKQIHGHVFHL 598
            +I   ++N+     V+A +L R      N I++VS+L AC+    +L+HG  IH H+   
Sbjct: 1221 LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT 1280

Query: 599  GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
            GF+ + ++ ++L+ MY+ C               KS   W++M++A  +HG G EA+++F
Sbjct: 1281 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIF 1340

Query: 644  HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDML 701
             EM N G+   + S    L+A ++  +++EG Q +  +++   +  E++ HV    +DM 
Sbjct: 1341 GEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIK---LGFESDLHVTNAAMDMY 1397

Query: 702  GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            G+ G++ +  + +   PI      W  ++SA + HG  +  ++    + KL P+
Sbjct: 1398 GKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/559 (28%), Positives = 265/559 (47%), Gaps = 42/559 (7%)

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G+  EA  LL           D +  + ++ LC D    ++G  +H + I    G DL +
Sbjct: 12  GRLAEALKLLSS----NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHL 67

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
              L+ FY K   +  A  +F+ + P   +VSW +M+SG            LF +M +  
Sbjct: 68  NTKLIIFYVKVGDVIAARNVFDGM-PERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG 126

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            + +  T  + L +C S   L+ G  +     K  F  N    +AL+  +  CG +  A 
Sbjct: 127 VKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDAS 186

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L   +    D   WN +I      G   ++   F+SM +     PD  TL +V+ A   
Sbjct: 187 YLFGTMMER-DVVSWNAMIGGYAVQGFADDSFCMFRSMLRG-GLVPDCYTLGSVLRASAE 244

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
                    +HG+  +   G    V   LI  Y +   ++SA  + +     +L +   +
Sbjct: 245 GGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTAL 304

Query: 544 ISAFSQNKA-EVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           I+ ++      V AL+LF+    +    +++ + S+L+ C  L     G QIH   F L 
Sbjct: 305 ITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIH--AFALK 362

Query: 600 FQENSFIS--SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
           +Q +  ++  +AL+DMY+                 K+  +W+S+IS Y  HG G  A+ L
Sbjct: 363 YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSL 422

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           + +M + G +P   + +SLL ACSH+GL  EG + +NNM+ +Y+++P  EH+ C+VD+  
Sbjct: 423 YKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFA 482

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R G L+EAY  +  + I+    +WGA+L A S +G   +GK+ A  LF ++PEN   Y+ 
Sbjct: 483 RQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVV 542

Query: 763 LSNMYVALGRWKDAVEIGK 781
           L+++Y A G W DA +I K
Sbjct: 543 LASIYSAAGLWDDAWKIRK 561



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 308/645 (47%), Gaps = 67/645 (10%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   +  + SL++ +S+ S  E +  +F      D+++WNAMI+A   +      L  F
Sbjct: 977  GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 1036

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
              M       +STTL  ++S  + ++ LK GR +H L +K G+ ++  +CN  + +Y++ 
Sbjct: 1037 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 1096

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G    +E  F  M   D +SWN++M+  + +      L    E+   G+  ++V+ +SA+
Sbjct: 1097 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 1156

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AA +    L   K++HAL I  G+ D  ++ V N+L++MY + G +  A++    M   D
Sbjct: 1157 AACSNPECLIESKIVHALIIVAGFHD--FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 1214

Query: 242  VVSWNAIIDGFALNGKFEE---AFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREG 297
             V+WNA+I G A N +  E   A+ L+ E    + +  +  T+V+++  C A   LL+ G
Sbjct: 1215 RVTWNALIGGHAENEEPNEAVKAYKLIRE----KGIPANYITMVSVLGACSAPDDLLKHG 1270

Query: 298  RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
              +H + +      D  + NSL+  Y+K   L+ +  +F+ +   +  ++WN+M++    
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP-ITWNAMVAANAH 1329

Query: 355  ---------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                     +F EM  +     QFSFS  LA   +      LE G+ +H   +KLGF ++
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL---AVLEEGQQLHGLVIKLGFESD 1386

Query: 403  TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                NA M MY  CG++     +L +  + S  S WNI+I A  ++G FQ+A +TF  M 
Sbjct: 1387 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS-WNILISAFARHGCFQKARETFHEML 1445

Query: 463  QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
             +    PD VT V+++SAC +  L  EG + +               +++   +G     
Sbjct: 1446 -KLGPKPDHVTFVSLLSACNHGGLVDEGLAYY---------------DSMTREFG----- 1484

Query: 523  KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
                 VF    +C      C+I    ++     A    + +   PN+++  S+L+AC   
Sbjct: 1485 -----VFPGIEHC-----VCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 1534

Query: 583  GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-CKSNAAWSSM 626
            G L   ++   H+  L   ++S        +YSN C ++  W  +
Sbjct: 1535 GNLELARKTAEHLLELDPSDDSAYV-----LYSNVCATSGKWEDV 1574



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 240/513 (46%), Gaps = 31/513 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  +T L+  Y  V    ++  +F     + VV+W AM++   +N         F
Sbjct: 60  GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G++ +  T    + A T + CL  G  V     K   + +  + +  V+ ++KC
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKC 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   D VSWN ++ G     + +     FR M   G   D  +L S +
Sbjct: 180 GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 239

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ASA  G L     IH +  +LGY    Y  VT  LI+ Y++ G + +A+    GM  KD
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGY--GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 297

Query: 242 VVSWNAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + S  A+I G+A  G +  +A DL  EM  M ++  D   + +++++CA+      G  +
Sbjct: 298 LFSSTALITGYAHEGIYSVDALDLFKEMNQM-NIGMDDVILCSMLNICANLASFALGTQI 356

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H +A++    YD+ M N+L+D Y+KS  +  A+  F+ +   N ++SW S+ISG      
Sbjct: 357 HAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKN-VISWTSLISGYAKHGY 415

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCN----SPESLE-FGKSIHCWQLKLGFSNNT 403
                 L+K+M     + +  T L++L +C+    + E  E F   ++ + +K    +  
Sbjct: 416 GHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEH-- 473

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF---QEAIKTFKS 460
              + ++ ++   G L  A++LL +I    + S W  ++ A +  G+    +EA     +
Sbjct: 474 --YSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFN 531

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           M  Q   S + V L ++ SA G  + A++ + L
Sbjct: 532 M--QPENSVNYVVLASIYSAAGLWDDAWKIRKL 562



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 242/559 (43%), Gaps = 50/559 (8%)

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R D +  L I+         KQG ++H   I  G  +D  L    +  Y K GD+ ++  
Sbjct: 27  RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARN 86

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F GM     VSW  ++SG   N   EK  + F +M   G +A+  +  SA+ A   L  
Sbjct: 87  VFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  +     K  + ++ +V   ++L+  +S+CG +E A   F  M  +DVVSWNA+I
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVK--SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 204

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+A+ G  +++F +   M L   + PD  T+ +++   A+   L     +HG   +   
Sbjct: 205 GGYAVQGFADDSFCMFRSM-LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LF 356
           G   ++   L++ Y+K+ SL  A+ L   +    DL S  ++I+G             LF
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLK-KDLFSSTALITGYAHEGIYSVDALDLF 322

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           KEM  +        L ++L  C +  S   G  IH + LK   S +    NAL+ MY   
Sbjct: 323 KEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKS 382

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++  A      +   +  S W  +I    ++G+   A+  +K M + +   P+ VT ++
Sbjct: 383 GEIEDAKRAFDEMEEKNVIS-WTSLISGYAKHGYGHMAVSLYKKM-ESKGFKPNDVTFLS 440

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +  L  EG                   N ++  Y    +IK  +          
Sbjct: 441 LLFACSHTGLTAEG---------------CECFNNMVNKY----NIKPRAE--------- 472

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
              ++CM+  F++      A  L   ++ + N     +IL A +  G +  GK+   ++F
Sbjct: 473 --HYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLF 530

Query: 597 HLGFQENSFISSALLDMYS 615
           ++   ENS     L  +YS
Sbjct: 531 NMQ-PENSVNYVVLASIYS 548


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 243/804 (30%), Positives = 421/804 (52%), Gaps = 38/804 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  YS     E +  +F E  +++  +W+ M++  V        +  F +M   G+
Sbjct: 132 TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 191

Query: 70  RFDSTTLLIIVSALTQMNCL-KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
             +   +  +++A ++   +  +G  VH   +K G++ D  +    V+ Y   G + +++
Sbjct: 192 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 251

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + VSW ++M G   +  P + L  ++ M   G   +  + ++  ++   L 
Sbjct: 252 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE 311

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +   G  +    I+ G+EDS  VSV NSLISM+S    +E A   F  M   D++SWNA+
Sbjct: 312 DQVLGYQVLGHIIQYGFEDS--VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 369

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +A +G   E+    H M+ + + E +  T+ +L+S+C+    L+ GR +HG  ++  
Sbjct: 370 ISAYAHHGLCRESLRCFHWMRHLHN-ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 428

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
           L  ++ + N+L+  YS++     AEL+F A+    DL+SWNSM++             + 
Sbjct: 429 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDGLKIL 487

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            E+L +    +  T  + L +C++PE L   K +H   +  GF +  I  NAL+ MY   
Sbjct: 488 AELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL 547

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G ++ A  +LQ +    D   WN +I    +N    EA+K +K + +++    + +T+V+
Sbjct: 548 GMMMEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYK-LIREKGIPANYITMVS 605

Query: 477 VISACGNLE-LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           V+ AC   + L   G  +H   + +    D  V+N+LITMY +C D+ S++ +F+   N 
Sbjct: 606 VLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK 665

Query: 536 NLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +  TWN M++A + +     AL++F   R++    ++ S    L+A   L VL  G+Q+H
Sbjct: 666 SPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLH 725

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
           G V  LGF+ +  +++A +DMY  C               +S  +W+ +ISA+  HG   
Sbjct: 726 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQ 785

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A E FHEM   G +P   + +SLLSAC+H GLVDEGL YY++M  E+ V P  EH VCI
Sbjct: 786 KARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCI 845

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           +D+LGRSG+L  A  FIK +P+ P    W ++L+AC  HG+ ++ ++ AE L +L+P + 
Sbjct: 846 IDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDD 905

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
             Y+  SN+    G+W+D   + K
Sbjct: 906 SAYVLYSNVCATSGKWEDVENLRK 929



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 186/714 (26%), Positives = 348/714 (48%), Gaps = 52/714 (7%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +   +++     G+ +H   I   +       N  +NMY+K G++  +   F  M   + 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS-YGKVIHA 198
            SW+T++SG +     E+ +  F +M   G + +   ++S + A +  G ++  G  +H 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +K G     YV    +L+  Y   G +  A++ F  M   +VVSW +++ G++ +G  
Sbjct: 221 FVVKTGILGDVYVGT--ALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 278

Query: 259 EEAFDLLHEMQL--MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
            E  ++   M+   +   +   ATV +   L  D +L   G  V G+ I+      + + 
Sbjct: 279 GEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL---GYQVLGHIIQYGFEDSVSVA 335

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMN--DLVSWNSMIS-----GLFKE-------MLYL 362
           NSL+  +S  +S+ +A  +F+    MN  D++SWN+MIS     GL +E       M +L
Sbjct: 336 NSLISMFSSFSSVEEACYVFDH---MNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 392

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
            ++ + +TL ++L  C+S ++L++G+ IH   +KLG  +N    N L+ +Y   G    A
Sbjct: 393 HNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDA 452

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             + Q ++   D   WN ++    Q+G   + +K    + Q      + VT  + ++AC 
Sbjct: 453 ELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACS 510

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           N E   E K +H L + +       V NAL+TMYG+   +  A  V ++    +  TWN 
Sbjct: 511 NPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNA 570

Query: 543 MISAFSQNKAE---VRALELFRHLEFEPNEISIVSILSACTQL-GVLRHGKQIHGHVFHL 598
           +I   ++N+     V+A +L R      N I++VS+L AC+    +L+HG  IH H+   
Sbjct: 571 LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT 630

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
           GF+ + ++ ++L+ MY+ C               KS   W++M++A  +HG G EA+++F
Sbjct: 631 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIF 690

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDML 701
            EM N G+   + S    L+A ++  +++EG Q +  +++   +  E++ HV    +DM 
Sbjct: 691 GEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIK---LGFESDLHVTNAAMDMY 747

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           G+ G++ +  + +   PI      W  ++SA + HG  +  ++    + KL P+
Sbjct: 748 GKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 173/645 (26%), Positives = 308/645 (47%), Gaps = 67/645 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL++ +S+ S  E +  +F      D+++WNAMI+A   +      L  F
Sbjct: 327 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 386

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +STTL  ++S  + ++ LK GR +H L +K G+ ++  +CN  + +Y++ 
Sbjct: 387 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 446

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +E  F  M   D +SWN++M+  + +      L    E+   G+  ++V+ +SA+
Sbjct: 447 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 506

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA +    L   K++HAL I  G+ D  ++ V N+L++MY + G +  A++    M   D
Sbjct: 507 AACSNPECLIESKIVHALIIVAGFHD--FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 564

Query: 242 VVSWNAIIDGFALNGKFEE---AFDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREG 297
            V+WNA+I G A N +  E   A+ L+ E    + +  +  T+V+++  C A   LL+ G
Sbjct: 565 RVTWNALIGGHAENEEPNEAVKAYKLIRE----KGIPANYITMVSVLGACSAPDDLLKHG 620

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
             +H + +      D  + NSL+  Y+K   L+ +  +F+ +   +  ++WN+M++    
Sbjct: 621 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSP-ITWNAMVAANAH 679

Query: 355 ---------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                    +F EM  +     QFSFS  LA   +      LE G+ +H   +KLGF ++
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL---AVLEEGQQLHGLVIKLGFESD 736

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               NA M MY  CG++     +L +  + S  S WNI+I A  ++G FQ+A +TF  M 
Sbjct: 737 LHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLS-WNILISAFARHGCFQKARETFHEML 795

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            +    PD VT V+++SAC +  L  EG + +               +++   +G     
Sbjct: 796 -KLGPKPDHVTFVSLLSACNHGGLVDEGLAYY---------------DSMTREFG----- 834

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
                VF    +C      C+I    ++     A    + +   PN+++  S+L+AC   
Sbjct: 835 -----VFPGIEHC-----VCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 884

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-CKSNAAWSSM 626
           G L   ++   H+  L   ++S        +YSN C ++  W  +
Sbjct: 885 GNLELARKTAEHLLELDPSDDSAYV-----LYSNVCATSGKWEDV 924


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 241/817 (29%), Positives = 408/817 (49%), Gaps = 50/817 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   S  LL  Y      + +L +F E   + + TWN MI               F
Sbjct: 98  GFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLF 157

Query: 62  GEMVEEGIRFDSTTLLIIVSAL----TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           G MV E +  +  T   ++ A        + ++Q   +H   I  G+   + +CN  +++
Sbjct: 158 GRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQ---IHARIIYQGLGKSTIVCNPLIDL 214

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y++ G ++ +   F G++  D  SW  ++SG   N    + +  F +M   G      + 
Sbjct: 215 YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAF 274

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           SS ++A   +  L  G+ +H L +KLG+    YV   N+L+S+Y   G + +AE  F  M
Sbjct: 275 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV--CNALVSLYFHLGSLISAEHIFSNM 332

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + +D V++N +I+G +  G  E+A +L   MQL   +EPD  T+ +L+  C+    L  G
Sbjct: 333 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMQL-DGLEPDSNTLASLVVACSSDGTLFSG 391

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           + +H Y  +     +  +  +L++ Y+K + +  A L +     + ++V WN M+     
Sbjct: 392 QQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA-LNYFLETEVENVVLWNVMLVAYGL 450

Query: 355 ---------LFKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                    +F++M     + +Q+++ +   IL +C     LE G+ IH   +K  F  N
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPS---ILKTCIRLGDLELGEQIHSQIIKTSFQLN 507

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               + L+ MY   G L  A+ +L R +   D   W  +I   TQ     +A+ TF+ M 
Sbjct: 508 AYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            +   S D V L N +SAC  L+   EG+ +H  A  S    D   QNAL+T+Y +C +I
Sbjct: 567 DRGIRS-DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNI 625

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC 579
           + A   FE     +   WN ++S F Q+     AL +F  +  E    N  +  S + A 
Sbjct: 626 EEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAA 685

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
           ++   ++ GKQ+H  +   G+   + + +A++ MY+ C               K+  +W+
Sbjct: 686 SETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWN 745

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +MI+AY  HG G EA++ F +M +S +RP   +++ +LSACSH GLVD+G++Y+ +M  E
Sbjct: 746 AMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTE 805

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           Y + P+ EH+VC+VDML R+G L  A +FI  +PI+P   VW  +LSAC  H + ++G+ 
Sbjct: 806 YGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEF 865

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            A  L +LEPE+   Y+ LSN+Y    +W DA ++ +
Sbjct: 866 AAHHLLELEPEDSATYVLLSNLYAVCRKW-DARDLTR 901



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 178/706 (25%), Positives = 321/706 (45%), Gaps = 48/706 (6%)

Query: 68  GIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           GIR +  TL  ++    + N  L +GR +H   +K G   ++ L    ++ Y   GDL+ 
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M      +WN ++      +   K    F  M       +  + S  +   AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL--EAC 179

Query: 187 LGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            G      V+  +  ++ Y+       V N LI +YS+ G ++ A R F G+  KD  SW
Sbjct: 180 RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSW 239

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I G + N    EA  L  +M ++  + P      +++S C     L  G  +HG  +
Sbjct: 240 VAMISGLSKNECEVEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +     D  + N+L+  Y    SL  AE +F+ ++   D V++N++I+G           
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEKAM 357

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LFK M     +   +TL +++ +C+S  +L  G+ +H +  KLGF++N     AL+++Y
Sbjct: 358 ELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLY 417

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C D+  A +     +   +   WN+++VA       + + + F+ M Q +   P+  T
Sbjct: 418 AKCSDIETALNYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYT 475

Query: 474 LVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +++  C   G+LEL   G+ +H   +K+   L+  V + LI MY +   + +A  +  
Sbjct: 476 YPSILKTCIRLGDLEL---GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILI 532

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
                ++ +W  MI+ ++Q   + +AL  FR +       +E+ + + +SAC  L  L+ 
Sbjct: 533 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 592

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGY 632
           G+QIH      GF  +    +AL+ +YS C +               N AW++++S +  
Sbjct: 593 GQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQ 652

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPET 691
            G   EA+ +F  M   GI     +  S + A S +  + +G Q +  + +  YD   ET
Sbjct: 653 SGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--SET 710

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           E    I+ M  + G + +A +    L ++ +   W AM++A S HG
Sbjct: 711 EVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSKHG 755



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 205/464 (44%), Gaps = 56/464 (12%)

Query: 370 TLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           TL  +L  C  +  SL+ G+ +H   LKLGF NN      L+  Y+  GDL  A  +   
Sbjct: 69  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDE 128

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +    WN +I          +    F  M   +N +P+  T   V+ AC    +AF
Sbjct: 129 MPERT-IFTWNKMIKELASRSLSGKVFCLFGRMV-NENVTPNEGTFSGVLEACRGGSVAF 186

Query: 489 E-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           +  + +H   +   +G  T V N LI +Y R   +  A  VF+  Y  +  +W  MIS  
Sbjct: 187 DVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGL 246

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           S+N+ EV A+ LF     L   P   +  S+LSAC ++  L  G+Q+HG V  LGF  ++
Sbjct: 247 SKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 306

Query: 605 FISSALLDMY-------------SNCKSNAA--WSSMISAYGYHGKGWEAIELFHEMCNS 649
           ++ +AL+ +Y             SN     A  ++++I+     G G +A+ELF  M   
Sbjct: 307 YVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD 366

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYY----------NNMLE---------------- 683
           G+ P  +++ SL+ ACS  G +  G Q +          N+ +E                
Sbjct: 367 GLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETA 426

Query: 684 -EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHH 736
             Y +  E E+ V    ML   G    L+ ++   + + I+   P    + ++L  C   
Sbjct: 427 LNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 486

Query: 737 GDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
           GD ++G+Q+   + K   +   Y  S L +MY  LG+   A +I
Sbjct: 487 GDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDI 530


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/749 (30%), Positives = 396/749 (52%), Gaps = 39/749 (5%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           +  + +M  EG + +  T L I+ A      LK G+ +H   I++G  +D  +    VNM
Sbjct: 15  MKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNM 74

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y KCG ++ ++  F  M   + +SW  ++ G  H    ++    F +M   G   ++ + 
Sbjct: 75  YVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTY 134

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S + A+A  G L + K +H+  +  G   +  + V N+L+ MY++ G I+ A   F GM
Sbjct: 135 VSILNANASAGALEWVKEVHSHAVNAGL--ALDLRVGNALVHMYAKSGSIDDARVVFDGM 192

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLR 295
             +D+ SW  +I G A +G+ +EAF L  +M+    + P++ T +++++  A   +  L 
Sbjct: 193 VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL-PNLTTYLSILNASAITSTGALE 251

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
             + VH +A +     DL + N+L+  Y+K  S+  A L+F+ +    D++SWN+MI GL
Sbjct: 252 WVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD-RDVISWNAMIGGL 310

Query: 356 FKE--------MLYLCSQFSF----STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            +         +     Q  F    +T L++L +  S  + E+ K +H   +++G  ++ 
Sbjct: 311 AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL 370

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              +A +HMYI CG +  A  +  +++  + T+ WN +I    Q    +EA+  F  M +
Sbjct: 371 RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTT-WNAMIGGVAQQKCGREALSLFLQM-R 428

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           ++   PD+ T VN++SA    E     K +H  A+ + + +D RV NAL+ MY +C +  
Sbjct: 429 REGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTM 487

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACT 580
            A  VF+     N+ TW  MIS  +Q+     A  LF  +  E   P+  + VSILSAC 
Sbjct: 488 YAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA 547

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSS 625
             G L   K++H H  + G   +  + +AL+ MY+ C S                 +W+ 
Sbjct: 548 STGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTV 607

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI     HG+G +A++LF +M   G +P   S +++LSACSH+GLVDEG + + ++ ++Y
Sbjct: 608 MIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDY 667

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  EH+ C+VD+LGR+G+L+EA  FI N+PI+P    WGA+L AC  +G+ +M +  
Sbjct: 668 GIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFA 727

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWK 774
           A+   KL+P++   Y+ LSN+Y A G W+
Sbjct: 728 AKERLKLKPKSASTYVLLSNIYAATGNWE 756



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 197/688 (28%), Positives = 329/688 (47%), Gaps = 48/688 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +   T+L+  Y      + +  +F +   ++V++W  MI             H F
Sbjct: 60  GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG   +S T + I++A      L+  + VH  ++ AG+  D  + N  V+MYAK 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F GM   D  SW  ++ G   +   ++    F +M   G   +  +  S +
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 182 AASAC--LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ASA    G L + K +H    K G+     + V N+LI MY++CG I+ A   F GM  
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISD--LRVGNALIHMYAKCGSIDDARLVFDGMCD 297

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DV+SWNA+I G A NG   EAF +  +MQ      PD  T ++L++    +      + 
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQ-QEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF--- 356
           VH +A+   L  DL + ++ +  Y +  S+  A+L+F+ +A  N + +WN+MI G+    
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRN-VTTWNAMIGGVAQQK 415

Query: 357 --KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
             +E L L  Q          +T + IL +    E+LE+ K +H + +  G  +  +G N
Sbjct: 416 CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVG-N 474

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+HMY  CG+ + A  +   +   + T+ W ++I    Q+G   EA   F  M  ++  
Sbjct: 475 ALVHMYAKCGNTMYAKQVFDDMVERNVTT-WTVMISGLAQHGCGHEAFSLFLQML-REGI 532

Query: 468 SPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            PD+ T V+++SAC   G LE     K +H  A+ + +  D RV NAL+ MY +C  +  
Sbjct: 533 VPDATTYVSILSACASTGALEWV---KEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDD 589

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQ 581
           A  VF+     ++ +W  MI   +Q+   + AL+LF  ++   F+PN  S V++LSAC+ 
Sbjct: 590 ARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSH 649

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE 641
            G++  G++              F+S  L   Y    +   ++ M+   G  G+  EA  
Sbjct: 650 AGLVDEGRR-------------QFLS--LTQDYGIEPTMEHYTCMVDLLGRAGQLEEAK- 693

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSG 669
             H + N  I P  +   +LL AC   G
Sbjct: 694 --HFILNMPIEPGDAPWGALLGACVTYG 719



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 196/673 (29%), Positives = 309/673 (45%), Gaps = 88/673 (13%)

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++ G     Y E  +  + +M   G Q + ++  S + A      L +GK IHA  I+ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           ++    V V  +L++MY +CG I+ A+  F  M  ++V+SW  +I G A  G+ +EAF  
Sbjct: 61  FQSD--VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
             +MQ      P+  T V++++  A +  L   + VH +A+   L  DL + N+L+  Y+
Sbjct: 119 FLQMQ-REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 177

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQF-------SFSTLL 372
           KS S+  A ++F+ +    D+ SW  MI GL      +E   L  Q        + +T L
Sbjct: 178 KSGSIDDARVVFDGMVE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYL 236

Query: 373 AIL--PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +IL   +  S  +LE+ K +H    K GF ++    NAL+HMY  CG +  A  +   + 
Sbjct: 237 SILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMC 296

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT---LVNVISACGNLELA 487
            + D   WN +I    QNG   EA   F  M QQ+   PDS T   L+N   + G  E  
Sbjct: 297 -DRDVISWNAMIGGLAQNGCGHEAFTIFLKM-QQEGFVPDSTTYLSLLNTHVSTGAWEWV 354

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
              K +H  A++  +  D RV +A + MY RC  I  A  +F+     N+ TWN MI   
Sbjct: 355 ---KEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGV 411

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +Q K    AL LF   R   F P+  + V+ILSA      L   K++H +    G  +  
Sbjct: 412 AQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLR 471

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + +AL+ MY+ C               ++   W+ MIS    HG G EA  LF +M   
Sbjct: 472 -VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLRE 530

Query: 650 GIRPTKSSVISLLSACSHSGL-----------------------------------VDEG 674
           GI P  ++ +S+LSAC+ +G                                    VD+ 
Sbjct: 531 GIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDA 590

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP-KPGVWG--AMLS 731
            + +++MLE  DV   T     ++  L + G+  +A +    + ++  KP  +   A+LS
Sbjct: 591 RRVFDDMLER-DVYSWT----VMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645

Query: 732 ACSHHGDTKMGKQ 744
           ACSH G    G++
Sbjct: 646 ACSHAGLVDEGRR 658



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 236/504 (46%), Gaps = 31/504 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++ L    +L+  Y+     + +  +F   C++DV++WNAMI    +N C       F
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIF 323

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +EG   DSTT L +++        +  + VH  +++ G+++D  + + FV+MY +C
Sbjct: 324 LKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC 383

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ ++  F  +   +  +WN ++ G        + L  F +M   G   D  +  + +
Sbjct: 384 GSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+     L + K +H+  I  G  D   + V N+L+ MY++CG+   A++ F  M  ++
Sbjct: 444 SANVGEEALEWVKEVHSYAIDAGLVD---LRVGNALVHMYAKCGNTMYAKQVFDDMVERN 500

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V +W  +I G A +G   EAF L  +M L   + PD  T V+++S CA +  L   + VH
Sbjct: 501 VTTWTVMISGLAQHGCGHEAFSLFLQM-LREGIVPDATTYVSILSACASTGALEWVKEVH 559

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+   L  DL + N+L+  Y+K  S+  A  +F+ +    D+ SW  MI G       
Sbjct: 560 SHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE-RDVYSWTVMIGGLAQHGRG 618

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +M     + +  + +A+L +C+    ++ G+     +  L  + +  G+   
Sbjct: 619 LDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGR-----RQFLSLTQD-YGIEPT 672

Query: 410 MHMYINCGDLVAAFSLLQRISH-------NSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           M  Y    DL+     L+   H           + W  ++ AC   G+ + A    K   
Sbjct: 673 MEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERL 732

Query: 463 QQQNASPDS-VTLVNVISACGNLE 485
           + +  S  + V L N+ +A GN E
Sbjct: 733 KLKPKSASTYVLLSNIYAATGNWE 756



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 43/366 (11%)

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G+ ++A+K +  M +++   P+ +T ++++ AC +      GK +H   ++S    D RV
Sbjct: 9   GYAEDAMKVYSQM-RREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRV 67

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
           + AL+ MY +C  I  A  +F+     N+ +W  MI   +       A   F  ++   F
Sbjct: 68  ETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGF 127

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---- 621
            PN  + VSIL+A    G L   K++H H  + G   +  + +AL+ MY+   S      
Sbjct: 128 IPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 187

Query: 622 -----------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL--SACSHS 668
                      +W+ MI     HG+G EA  LF +M   G  P  ++ +S+L  SA + +
Sbjct: 188 VFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITST 247

Query: 669 GL---VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           G    V E  ++        D+R        ++ M  + G + +A      +  +     
Sbjct: 248 GALEWVKEVHKHAGKAGFISDLRVGN----ALIHMYAKCGSIDDARLVFDGMCDRDVIS- 302

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPE----NVGYYISLSNMYVALGRW-------K 774
           W AM+   + +G    G +   +  K++ E    +   Y+SL N +V+ G W       K
Sbjct: 303 WNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 775 DAVEIG 780
            AVE+G
Sbjct: 360 HAVEVG 365


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/738 (31%), Positives = 374/738 (50%), Gaps = 38/738 (5%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +  L+ I+   T  + L QGR  H   +  G+  +  L    + MY  CG    ++  F 
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 133 GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +    +  WN ++ G  +   +    L YF+ +G  G   D  +    + A   L  ++
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG-CGTLPDKYTFPYVIKACGGLNSVA 164

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+V+H     +G+E   +V   +SLI  YS+ G I  A   F  M  KD V WN +++G
Sbjct: 165 LGRVVHDKIQFMGFELDVFVG--SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG ++ A  +  EM+   +  P+  T   ++S+CA  +++  G  +HG  +   L  
Sbjct: 223 YVKNGDWDNATGVFMEMRRTET-NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEM 281

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + N+L+  Y+K   L  A  LF+ + P  DLV+WN MISG            LF EM
Sbjct: 282 DSPVANTLLAMYAKCGHLFDARRLFDMM-PKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +    +    T  + LP  +   +L  GK IHC+ ++ G S +    +AL+ +Y  C D+
Sbjct: 341 ISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDV 400

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +  + +      C   +I     NG    A++ F+ + Q++    +SVTL +V+ 
Sbjct: 401 EMARKIFDQRTPVDIVVC-TAMISGYVLNGMNNNALEIFRWLLQER-MRANSVTLASVLP 458

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC  L     GK LHG  LK+  G    V +A++ MY +C  +  A   F    + +   
Sbjct: 459 ACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVC 518

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVF 596
           WN MI++ SQN     A++LFR +     +   VSI   LSAC  L  L +GK+IH  + 
Sbjct: 519 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 578

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
              F+ + F  SAL+DMYS C               K+  +W+S+I+AYG HG+  +++ 
Sbjct: 579 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLN 638

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LFH M   GI+P   + ++++SAC H+G VDEG+ Y+  M EE  +    EH+ C+VD+ 
Sbjct: 639 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLF 698

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G+L EA+  I ++P  P  GVWG +L AC  HG+ ++ +  +  LF L+P+N GYY+
Sbjct: 699 GRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYV 758

Query: 762 SLSNMYVALGRWKDAVEI 779
            LSN++   G+W+  ++I
Sbjct: 759 LLSNVHANAGQWESVLKI 776



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 158/596 (26%), Positives = 277/596 (46%), Gaps = 31/596 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   +SL+  YS       +  LF    +KD V WN M+   V+N         F
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM       +S T   ++S       +  G  +H L + +G+  DS + N  + MYAKC
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D V+WN ++SG + N + ++    F EM  +  + D+++ SS +
Sbjct: 297 GHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFL 356

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    L  GK IH   I+ G   S  V + ++LI +Y +C D+E A + F   T  D
Sbjct: 357 PLLSEGATLRQGKEIHCYIIRNGV--SLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVD 414

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V   A+I G+ LNG    A ++   + L   +  +  T+ +++  CA    L  G+ +H
Sbjct: 415 IVVCTAMISGYVLNGMNNNALEIFRWL-LQERMRANSVTLASVLPACAGLAALTLGKELH 473

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ ++   G    + +++MD Y+K   L  A   F  I+   D V WNSMI+        
Sbjct: 474 GHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD-KDAVCWNSMITSCSQNGKP 532

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M    +++   ++ A L +C +  +L +GK IH + ++  F ++    +AL
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 592

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG+L  A  +   +   ++ S WN +I A   +G  ++++  F  M       P
Sbjct: 593 IDMYSKCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGML-GDGIQP 650

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           D VT + +ISACG+     EG  +H    +   +G+  R+++   ++ ++GR   +  A 
Sbjct: 651 DHVTFLAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 708

Query: 527 TVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEISIVSILS 577
            +  S  ++ +   W  ++ A   +     AEV +  LF   + +P       +LS
Sbjct: 709 GMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF---DLDPQNSGYYVLLS 761



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 241/501 (48%), Gaps = 20/501 (3%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P + +LL  Y+   +   +  LF      D+VTWN MI+  V+N  +      F EM+  
Sbjct: 284 PVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISA 343

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            ++ DS T    +  L++   L+QG+ +HC  I+ G+  D  L +  +++Y KC D+  +
Sbjct: 344 RMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F      D V    ++SG + N      L  FR +     +A++V+L+S + A A L
Sbjct: 404 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L+ GK +H   +K G+  S YV   ++++ MY++CG ++ A + F G++ KD V WN+
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNS 521

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   + NGK EEA DL  +M  M   + D  ++   +S CA+   L  G+ +H + +R 
Sbjct: 522 MITSCSQNGKPEEAIDLFRQMG-MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG 580

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               DL   ++L+D YSK  +L  A  +F+ +   N+ VSWNS+I+             L
Sbjct: 581 AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE-VSWNSIIAAYGNHGRLKDSLNL 639

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F  ML    Q    T LAI+ +C     ++ G     C   +LG          ++ ++ 
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 699

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSV 472
             G L  AF ++  +  + D   W  ++ AC  +G+ + A    +++     QN S   V
Sbjct: 700 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN-SGYYV 758

Query: 473 TLVNVISACGNLELAFEGKSL 493
            L NV +  G  E   + +SL
Sbjct: 759 LLSNVHANAGQWESVLKIRSL 779


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/795 (28%), Positives = 403/795 (50%), Gaps = 50/795 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L++ YS+    + + A+F  +   DV TW  +I A   +  +      + +M +EG+R +
Sbjct: 152 LISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSN 211

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD-LNSSECTF 131
             T L ++   + +  L+ G+ VH L++ +G+     + N  ++MY KC    + +   F
Sbjct: 212 EITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVF 271

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +     +SW+  ++   +  + E  +  F  M   G + +  +L+S + A A +G   
Sbjct: 272 LRISRPSVISWSAFIAA--YGQHWE-AIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 328

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IHAL +   Y  +   +V N+  S+Y++C  +  A R F  + CKD VSWNAI+  
Sbjct: 329 QGRRIHALVLAGPYTQN--TTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSA 386

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE---------GRSVHG 302
           +A  G F +A  L  +MQ+   V PD  T +T++  C+ S LL++         GR VH 
Sbjct: 387 YAKQGLFRDAIFLSRQMQVEGFV-PDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHS 445

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--------- 353
             I   L  D  + N L+  Y +  SL  A   F  I   N + SW  +IS         
Sbjct: 446 QMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRN-VFSWTILISLLVQNGEAS 504

Query: 354 ---GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               L K M    ++ +  T +++L +C+    L  GK+IH      G  ++ I  NAL+
Sbjct: 505 EGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALL 564

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           +MY  C  L  A  + +R+    D   W I+I A    G+  EA++ ++ M +Q+ + PD
Sbjct: 565 NMYTTCESLDEARLVFERMVFR-DVVSWTIIISAYAHAGYPLEALQLYRRM-EQEFSRPD 622

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +VTL++V+ AC +L    EGK++H   + S +  D  V  A+++ YG+C  ++ A  VF+
Sbjct: 623 AVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFD 682

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
              + ++  WN MI A++QN  E +A  L+  +   +  PN+++++++L +C+    +  
Sbjct: 683 RILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMER 742

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYG 631
           G  +H      G+  ++ + +AL++MY+ C                K+  +WSS+++AY 
Sbjct: 743 GSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYA 802

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G+   A  LF  M   G+ P   +  S+L ACSH+GL DEG  Y+ +M  ++ + P  
Sbjct: 803 RNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTP 862

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+V++L +SG++++A  F+  +P+QP    W ++L AC  H D + G   A+ L  
Sbjct: 863 EHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLD 922

Query: 752 LEPENVGYYISLSNM 766
            EP N   Y+ L N+
Sbjct: 923 AEPRNSAAYVLLYNI 937



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 187/716 (26%), Positives = 338/716 (47%), Gaps = 55/716 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  S SL+  Y      E +   F     +D+++WNAMIT   ++ C    +  +
Sbjct: 40  GLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLY 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                EG + D  T   +++A      LK GR++H   +    ++D  +CN  ++MY+ C
Sbjct: 100 AYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDC 159

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F      D  +W T+++    +   E     + +M   G +++ ++  + +
Sbjct: 160 GSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVL 219

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCK 240
              + L  L  GK +H L +  G + S  + + NSLISMY +C    + A   F  ++  
Sbjct: 220 DTCSSLEVLETGKHVHRLALGSGLDFS--LRMENSLISMYGKCSRHPDEAREVFLRISRP 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            V+SW+A I  +  + +  + F+L++    +  V+P+  T+ +++  CA      +GR +
Sbjct: 278 SVISWSAFIAAYGQHWEAIKTFELMN----LEGVKPNATTLTSVLRACATVGAHEQGRRI 333

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H   +      +  ++N+    Y+K + ++ A  +F++I P  D VSWN+++S     GL
Sbjct: 334 HALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSI-PCKDAVSWNAIVSAYAKQGL 392

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCN---------SPESLEFGKSIHCWQLKLGF 399
           F++ ++L  Q           T + IL SC+         + +SL  G+ +H   +  G 
Sbjct: 393 FRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGL 452

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +T   N L+ MY  CG L  A +  Q I H  +   W I+I    QNG   E ++  K
Sbjct: 453 DGDTYLGNLLVQMYGRCGSLDDARAAFQGI-HQRNVFSWTILISLLVQNGEASEGLELLK 511

Query: 460 SMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
           SM   +    + +T ++++ AC   G+L L   GK++H       +  D    NAL+ MY
Sbjct: 512 SM-DLEGTEANKITFISLLGACSVTGDLSL---GKTIHERIRTKGLESDIITSNALLNMY 567

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
             C  +  A  VFE     ++ +W  +ISA++     + AL+L+R +E E   P+ ++++
Sbjct: 568 TTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLI 627

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           S+L AC  L  L  GK IH  +   G + + F+ +A++  Y  C               K
Sbjct: 628 SVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDK 687

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               W++MI AY  +    +A  L+ EM  + + P   ++I+LL +CS +  ++ G
Sbjct: 688 DIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERG 743



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 200/741 (26%), Positives = 344/741 (46%), Gaps = 58/741 (7%)

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+  D  TLL  VSA   +    QG+ +H   + +G+ A   L N  V MY KCG +  
Sbjct: 4   EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D +SWN +++    +   ++ +  +      G + D V+ +S + A   
Sbjct: 64  ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            G+L +G+++H       +  + +VS   V N LISMYS CG ++ A   F      DV 
Sbjct: 124 SGDLKFGRMLHE-----HFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVC 178

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W  +I  +  +GK E AF    +M     +  +  T +T++  C+   +L  G+ VH  
Sbjct: 179 TWTTVIAAYTRHGKLECAFATWSKMH-QEGLRSNEITFLTVLDTCSSLEVLETGKHVHRL 237

Query: 304 AIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           A+   L + L M NSL+  Y K S    +A  +F  I+  + ++SW++ I+         
Sbjct: 238 ALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPS-VISWSAFIAAYGQHWEAI 296

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F+ M     + + +TL ++L +C +  + E G+ IH   L   ++ NT  +NA   +Y
Sbjct: 297 KTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLY 356

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  +  A  +   I    D   WN ++ A  + G F++AI   + M Q +   PD +T
Sbjct: 357 AKCSRVADASRVFSSIP-CKDAVSWNAIVSAYAKQGLFRDAIFLSRQM-QVEGFVPDDIT 414

Query: 474 LVNVISAC---------GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            + ++ +C         GN +   +G+ +H   + + +  DT + N L+ MYGRC  +  
Sbjct: 415 FITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDD 474

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQ 581
           A   F+  +  N+ +W  +IS   QN      LEL + ++    E N+I+ +S+L AC+ 
Sbjct: 475 ARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSV 534

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSM 626
            G L  GK IH  +   G + +   S+ALL+MY+ C+S                 +W+ +
Sbjct: 535 TGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTII 594

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE--- 683
           ISAY + G   EA++L+  M     RP   ++IS+L AC+    + EG   +  ++    
Sbjct: 595 ISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGV 654

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA-CSHHGDTKMG 742
           E DV   T     +V   G+   +++A +    + +      W AM+ A   +H + K  
Sbjct: 655 ETDVFVGT----AVVSFYGKCEAVEDARQVFDRI-LDKDIVCWNAMIGAYAQNHCEEKAF 709

Query: 743 KQVAELLFKLEPENVGYYISL 763
               E++    P N    I+L
Sbjct: 710 ALYLEMVENQMPPNDVTLITL 730



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 266/546 (48%), Gaps = 51/546 (9%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M   G   D ++L +AV+A A LG+   GK IHA  +  G   S  V ++NSL+ MY +C
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGAS--VLLSNSLVYMYGKC 58

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G +E A  AF  M  +D++SWNA+I  +A +   ++A   L+    +   +PD  T  +L
Sbjct: 59  GSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQ-LYAYSRLEGTKPDEVTFASL 117

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN-AIAPMN 343
           ++ C  S  L+ GR +H + +      D ++ N L+  YS   SL  A  +F  +  P  
Sbjct: 118 LNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRP-- 175

Query: 344 DLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIH 391
           D+ +W ++I+   +     C+  ++S            T L +L +C+S E LE GK +H
Sbjct: 176 DVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVH 235

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
              L  G   +    N+L+ MY  C      A  +  RIS  S  S W+  I A    G 
Sbjct: 236 RLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVIS-WSAFIAA---YGQ 291

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
             EAIKTF+ M   +   P++ TL +V+ AC  +    +G+ +H L L      +T V N
Sbjct: 292 HWEAIKTFELM-NLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLN 350

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---P 567
           A  ++Y +C  +  AS VF S    +  +WN ++SA+++      A+ L R ++ E   P
Sbjct: 351 AAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVP 410

Query: 568 NEISIVSILSACTQLGVLRH---------GKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
           ++I+ ++IL +C+Q  +L+          G+Q+H  +   G   ++++ + L+ MY  C 
Sbjct: 411 DDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCG 470

Query: 619 S----NAA-----------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S     AA           W+ +IS    +G+  E +EL   M   G    K + ISLL 
Sbjct: 471 SLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLG 530

Query: 664 ACSHSG 669
           ACS +G
Sbjct: 531 ACSVTG 536



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 11/357 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + + TS +LL  Y+     + +  +F     +DVV+W  +I+A       +  L  
Sbjct: 551 KGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQL 610

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M +E  R D+ TL+ ++ A   +  L +G+ +H   + +G+  D  +    V+ Y K
Sbjct: 611 YRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGK 670

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +  +   F  +   D V WN ++     N+  EK    + EM  +    ++V+L + 
Sbjct: 671 CEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITL 730

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTC 239
           + + +   ++  G  +H      GY    + SV N+LI+MY++ CG++EAA+ AF  +  
Sbjct: 731 LDSCSSTCKMERGSSLHREAAARGY--LSHTSVVNALINMYAKCCGNLEAAQTAFESVAS 788

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+VVSW++I+  +A NG+ + A +L   M     V P+I T  +++  C+ + L  EG S
Sbjct: 789 KNVVSWSSIVAAYARNGEEDRARNLFWTMN-QDGVLPNIVTFTSVLHACSHAGLADEGWS 847

Query: 300 VHGYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              Y +     + L         +++  +KS  + +A    +A+    D  +W S++
Sbjct: 848 ---YFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLL 901


>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Cucumis sativus]
          Length = 873

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/786 (31%), Positives = 408/786 (51%), Gaps = 82/786 (10%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + D+     I  +   +  +  G+ +   ++K G IA  S+    +N+YA+CG  +  
Sbjct: 38  GFKPDNHIFAAIFKSCAALFAINIGKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDEC 97

Query: 128 ECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASA 185
              F  ++  D V+WN I+SG C    +  K +  F +M   GE +   ++++S +   +
Sbjct: 98  WKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCS 157

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
            +G+   GK IH+  +K G +    V   N+LISMY++ G     A  AF  +  KDVV+
Sbjct: 158 RVGKGVVGKSIHSFVMKSGLDRDTLVG--NALISMYAKSGQPWYDAYAAFNSIIHKDVVT 215

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLREGRSVH 301
           WN II   A      +A  L   + L   +EP+  T+  ++ +CA   +++  R G+ +H
Sbjct: 216 WNTIISALAEKNLMFDALQLF-SLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIH 274

Query: 302 GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           GY  RR  L  D+ + N+LM+ Y +   + +AE+LF+ +    DLVSWN++ISG      
Sbjct: 275 GYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLK-QRDLVSWNTLISGYSLNDK 333

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGV 406
                  F ++L L S     TL+++LP+C   ++L  GK IH + L+      ++T+G 
Sbjct: 334 WLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVG- 392

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+  Y  C D+ +AF     IS + D   WN V+ A  + G+  +  +    M +++ 
Sbjct: 393 NALVSFYTKCNDVKSAFHSFSLIS-SKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRER- 450

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRVQNALITMYGRCRDIK 523
             PD  T++++I+ C  +    + K +H  ++++ +        + NAL+  Y +C  I 
Sbjct: 451 FKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIID 510

Query: 524 SASTVFE---------------SCY-NC----------------NLCTWNCMISAFSQNK 551
            A  +FE               SCY NC                +L TWN MI  +++N 
Sbjct: 511 YALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENN 570

Query: 552 AEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL LFR L+    +P+ +SI+S+L  C +L   R  K+ HG+ F   F E+ ++  
Sbjct: 571 CPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF-EDVYLDG 629

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           ALLD Y+ C               K    ++SMIS Y  HG G EA+++F  M  SG++P
Sbjct: 630 ALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKP 689

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
               V S+LSACSH+GLVD+GL  +++M E   ++P  EH+ C+VD+L R G++++AY F
Sbjct: 690 DHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSF 749

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +  +PIQP   +WG +L AC  H + ++G  VAE LF+ + +++G Y+ +SN+Y A  +W
Sbjct: 750 VIGMPIQPDANIWGTLLGACKTHHEVELGLVVAEQLFETKADDIGNYVVMSNLYAADAKW 809

Query: 774 KDAVEI 779
              +E+
Sbjct: 810 DGVLEV 815



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 171/647 (26%), Positives = 308/647 (47%), Gaps = 61/647 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLH 59
           +G +A       LL  Y+    F+    LF +  ++DVVTWN +++  C         + 
Sbjct: 72  QGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIR 131

Query: 60  FFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F +M  EG ++  + T+  I+   +++     G+ +H   +K+G+  D+ + N  ++MY
Sbjct: 132 LFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMY 191

Query: 119 AKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           AK G     +   F+ +   D V+WNTI+S     N     L  F  M     + + +++
Sbjct: 192 AKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITI 251

Query: 178 SSAVAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           +  +   A  G      +GK IH   I    E    +SV N+L+++Y + G +E AE  F
Sbjct: 252 ACILPVCASFGNNVSCRFGKEIHGY-IHRRTELIEDISVCNALMNLYLRVGQMEEAEILF 310

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +  +D+VSWN +I G++LN K+ EA D   ++  + S +PD  T+++++  CA S  L
Sbjct: 311 SHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGS-DPDSVTLISVLPACAYSQNL 369

Query: 295 REGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           R G+ +HGY +R  +L  D  + N+L+ FY+K N +  A   F+ I+   DL+SWNS+++
Sbjct: 370 RIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISS-KDLISWNSVLN 428

Query: 354 GL--------FKEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                     F  +L+L  +  F     T+L+I+  C +       K +HC+ ++     
Sbjct: 429 AFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFE 488

Query: 402 NTIG---VNALMHMYINCGDLVAAFSLLQR-------ISHNSDTSC-------------- 437
              G   +NAL+  Y  CG +  A  + +        ++ NS  SC              
Sbjct: 489 ADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIF 548

Query: 438 ----------WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
                     WN++I    +N   ++A+  F+ + Q +   PD+V++++++  C  L   
Sbjct: 549 SGMSETDLTTWNLMIRVYAENNCPRDALGLFRRL-QIKGMKPDAVSIMSLLPVCNELASF 607

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
              K  HG + +S    D  +  AL+  Y +C  +  A  +FES    +L  +  MIS +
Sbjct: 608 RLLKECHGYSFRSRFE-DVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGY 666

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQI 591
           + +     AL++F ++     +P+ + + SILSAC+  G++  G  I
Sbjct: 667 AIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVDQGLNI 713



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 42/447 (9%)

Query: 344 DLVSWNSMISGL-----FKEML-YLCSQFSFST--------LLAILPSCNSPESLEFGKS 389
           D  SW+S I  L      +E+L     +F  S+          AI  SC +  ++  GK+
Sbjct: 5   DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKA 64

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-CTQN 448
           +  + +K G          L+++Y  CG     + L ++++H  D   WNI++   C   
Sbjct: 65  LQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHR-DVVTWNIILSGYCRSQ 123

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
            H  +AI+ F  M  +    P ++T+ +++  C  +     GKS+H   +KS +  DT V
Sbjct: 124 IHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLV 183

Query: 509 QNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---E 564
            NALI+MY +  +    A   F S  + ++ TWN +ISA ++      AL+LF  +    
Sbjct: 184 GNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEP 243

Query: 565 FEPNEISIVSILSACTQLG---VLRHGKQIHGHVF-HLGFQENSFISSALLDMY------ 614
            EPN I+I  IL  C   G     R GK+IHG++       E+  + +AL+++Y      
Sbjct: 244 IEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQM 303

Query: 615 -------SNCKSN--AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                  S+ K     +W+++IS Y  + K  EA++ F ++   G  P   ++IS+L AC
Sbjct: 304 EEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPAC 363

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           ++S  +  G   +  +L    +  ++     +V    +   ++ A+       I  K  +
Sbjct: 364 AYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFS--LISSKDLI 421

Query: 726 -WGAMLSACSHHGDTKMGKQVAELLFK 751
            W ++L+A +  G+T    ++  L+ +
Sbjct: 422 SWNSVLNAFAEFGNTTQFPRLLHLMLR 448



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 213/492 (43%), Gaps = 72/492 (14%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y  V   E +  LF     +D+V+WN +I+    N   +  +  F +++  G   
Sbjct: 292 ALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDP 351

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECT 130
           DS TL+ ++ A      L+ G+++H   ++  +++ DS++ N  V+ Y KC D+ S+  +
Sbjct: 352 DSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHS 411

Query: 131 FSGMHCADTVSWNTIMSGCLH----NNYPEKCLLYFREMGWSGEQADNVSLSSAV----- 181
           FS +   D +SWN++++          +P    L  RE      + D+ ++ S +     
Sbjct: 412 FSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERF----KPDHFTILSIINFCIT 467

Query: 182 -------------AASACLGELSYGKVI---------------HALGIKLGYEDSPYVSV 213
                        +  ACL E  YG  I               +AL I         +  
Sbjct: 468 VLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVT 527

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            NS+IS Y  C     A   F GM+  D+ +WN +I  +A N    +A  L   +Q+ + 
Sbjct: 528 CNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQI-KG 586

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           ++PD  ++++L+ +C +    R  +  HGY+ R     D+ +  +L+D Y+K  ++  A 
Sbjct: 587 MKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRFE-DVYLDGALLDAYAKCGAVDCAY 645

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            LF + +   DLV + SMISG            +F  ML    +     + +IL +C+  
Sbjct: 646 KLFES-SSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSHT 704

Query: 382 ESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNS 433
             ++ G +I H  +         I +   M  Y    DL+A       A+S +  +    
Sbjct: 705 GLVDQGLNIFHSME-------EVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQP 757

Query: 434 DTSCWNIVIVAC 445
           D + W  ++ AC
Sbjct: 758 DANIWGTLLGAC 769



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 7/286 (2%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L T  S+++ Y N      +L +F      D+ TWN MI    EN C    L  F  + 
Sbjct: 524 NLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +G++ D+ +++ ++    ++   +  +  H  S ++    D  L    ++ YAKCG ++
Sbjct: 584 IKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRS-RFEDVYLDGALLDAYAKCGAVD 642

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F      D V + +++SG   +   E+ L  F  M  SG + D+V ++S ++A +
Sbjct: 643 CAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACS 702

Query: 186 CLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
             G +  G  + H++   +  +  P +     ++ + ++ G I+ A     GM  + D  
Sbjct: 703 HTGLVDQGLNIFHSMEEVIHIK--PTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDAN 760

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            W  ++   A     E    L+   QL  +   DI   V + +L A
Sbjct: 761 IWGTLLG--ACKTHHEVELGLVVAEQLFETKADDIGNYVVMSNLYA 804


>gi|449484874|ref|XP_004157004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Cucumis sativus]
          Length = 881

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/785 (31%), Positives = 407/785 (51%), Gaps = 82/785 (10%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + D+     I  +   +  +  G+ +   ++K G I   S+    +N+YA+CG  +  
Sbjct: 38  GFKPDNHIFAAIFKSCAALFAINVGKALQGYAVKQGEIVCQSVYKGLLNLYARCGAFDEC 97

Query: 128 ECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASA 185
              F  ++  D V+WN I+SG C    +  K +  F +M   GE +   ++++S +   +
Sbjct: 98  WKLFEQLNRRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCS 157

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
            +G+   GK IH+  +K G +    V   N+LISMY++ G     A  AF  +  KDVV+
Sbjct: 158 RVGKGVVGKSIHSFVMKSGLDRDTLVG--NALISMYAKSGQPWYDAYAAFNSIIHKDVVT 215

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLREGRSVH 301
           WN II   A      +A  L   M L   +EP+  T+  ++ +CA   +++  R G+ +H
Sbjct: 216 WNTIISALAEKNLMFDALQLFSLM-LEEPIEPNYITIACILPVCASFGNNVSCRFGKEIH 274

Query: 302 GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           GY  RR  L  D+ + N+LM+ Y +   + +AE+LF+ +    DLVSWN++ISG      
Sbjct: 275 GYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLK-QRDLVSWNTLISGYSLNDK 333

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGV 406
                  F ++L L S     TL+++LP+C   ++L  GK IH + L+      ++T+G 
Sbjct: 334 WLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPILSEDSTVG- 392

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+  Y  C D+ +AF     IS + D   WN V+ A  + G+  + ++    M +++ 
Sbjct: 393 NALVSFYTKCNDVKSAFHSFSLIS-SKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRER- 450

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRVQNALITMYGRCRDIK 523
             PD  T++++I+ C  +    + K +H  ++++ +        + NAL+  Y +C  I 
Sbjct: 451 FKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIID 510

Query: 524 SASTVFE---------------SCY-NC----------------NLCTWNCMISAFSQNK 551
            A  +FE               SCY NC                +L TWN MI  +++N 
Sbjct: 511 YALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENN 570

Query: 552 AEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL LFR L+    +P+ +SI+S+L  C +L   R  K+ HG+ F   F E+ ++  
Sbjct: 571 CPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF-EDVYLDG 629

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           ALLD Y+ C               K    ++SMIS Y  HG G EA+++F  M  SG++P
Sbjct: 630 ALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKP 689

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
               V S+LSACSH+GLVD+GL  +++M E   ++P  EH+ C+VD+L R G++++AY F
Sbjct: 690 DHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSF 749

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +  +PIQP   +WG +L AC  H + ++G  VAE LF+ + +++G Y+ +SN+Y A  +W
Sbjct: 750 VIGMPIQPDANIWGTLLGACKTHHEVELGLVVAEKLFETKADDIGNYVVMSNLYAADAKW 809

Query: 774 KDAVE 778
              +E
Sbjct: 810 DGVLE 814



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 303/635 (47%), Gaps = 61/635 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEG-IR 70
           LL  Y+    F+    LF +   +DVVTWN +++  C         +  F +M  EG ++
Sbjct: 84  LLNLYARCGAFDECWKLFEQLNRRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVK 143

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD-LNSSEC 129
             + T+  I+   +++     G+ +H   +K+G+  D+ + N  ++MYAK G     +  
Sbjct: 144 PSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYA 203

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F+ +   D V+WNTI+S     N     L  F  M     + + ++++  +   A  G 
Sbjct: 204 AFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGN 263

Query: 190 ---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
                +GK IH   I    E    +SV N+L+++Y + G +E AE  F  +  +D+VSWN
Sbjct: 264 NVSCRFGKEIHGY-IHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWN 322

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I G++LN K+ EA D   ++  + S +PD  T+++++  CA S  LR G+ +HGY +R
Sbjct: 323 TLISGYSLNDKWLEAVDHFCKLLCLGS-DPDSVTLISVLPACAYSQNLRIGKMIHGYILR 381

Query: 307 R-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------FK 357
             +L  D  + N+L+ FY+K N +  A   F+ I+   DL+SWNS+++          F 
Sbjct: 382 HPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISS-KDLISWNSVLNAFAEFGNTTQFL 440

Query: 358 EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---VNALM 410
            +L+L  +  F     T+L+I+  C +       K +HC+ ++        G   +NAL+
Sbjct: 441 RLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALL 500

Query: 411 HMYINCGDLVAAFSLLQR-------ISHNSDTSC------------------------WN 439
             Y  CG +  A  + +        ++ NS  SC                        WN
Sbjct: 501 DAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWN 560

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++I    +N   ++A+  F+ + Q +   PD+V++++++  C  L      K  HG + +
Sbjct: 561 LMIRVYAENNCPRDALGLFRRL-QIKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFR 619

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    D  +  AL+  Y +C  +  A  +FES    +L  +  MIS ++ +     AL++
Sbjct: 620 SRFE-DVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKV 678

Query: 560 FRHL---EFEPNEISIVSILSACTQLGVLRHGKQI 591
           F ++     +P+ + + SILSAC+  G++  G  I
Sbjct: 679 FTNMLESGVKPDHVVVTSILSACSHTGLVDQGLNI 713



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 209/454 (46%), Gaps = 44/454 (9%)

Query: 344 DLVSWNSMISGL-----FKEML-YLCSQFSFST--------LLAILPSCNSPESLEFGKS 389
           D  SW+S I  L      +E+L     +F  S+          AI  SC +  ++  GK+
Sbjct: 5   DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINVGKA 64

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-CTQN 448
           +  + +K G          L+++Y  CG     + L ++++   D   WNI++   C   
Sbjct: 65  LQGYAVKQGEIVCQSVYKGLLNLYARCGAFDECWKLFEQLNRR-DVVTWNIILSGYCRSQ 123

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
            H  +AI+ F  M  +    P ++T+ +++  C  +     GKS+H   +KS +  DT V
Sbjct: 124 IHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLV 183

Query: 509 QNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---E 564
            NALI+MY +  +    A   F S  + ++ TWN +ISA ++      AL+LF  +    
Sbjct: 184 GNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEP 243

Query: 565 FEPNEISIVSILSACTQLG---VLRHGKQIHGHVFHLG-FQENSFISSALLDMY------ 614
            EPN I+I  IL  C   G     R GK+IHG++       E+  + +AL+++Y      
Sbjct: 244 IEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQM 303

Query: 615 -------SNCKSN--AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                  S+ K     +W+++IS Y  + K  EA++ F ++   G  P   ++IS+L AC
Sbjct: 304 EEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPAC 363

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           ++S  +  G   +  +L    +  ++     +V    +   ++ A+       I  K  +
Sbjct: 364 AYSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFS--LISSKDLI 421

Query: 726 -WGAMLSACSHHGDTKMGKQVAELLF--KLEPEN 756
            W ++L+A +  G+T    ++  L+   + +P++
Sbjct: 422 SWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDH 455



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 211/488 (43%), Gaps = 64/488 (13%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y  V   E +  LF     +D+V+WN +I+    N   +  +  F +++  G   
Sbjct: 292 ALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDP 351

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECT 130
           DS TL+ ++ A      L+ G+++H   ++  +++ DS++ N  V+ Y KC D+ S+  +
Sbjct: 352 DSVTLISVLPACAYSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHS 411

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV--------- 181
           FS +   D +SWN++++         + L     M     + D+ ++ S +         
Sbjct: 412 FSLISSKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIINFCITVLGG 471

Query: 182 ---------AASACLGELSYGKVI---------------HALGIKLGYEDSPYVSVTNSL 217
                    +  ACL E  YG  I               +AL I         +   NS+
Sbjct: 472 CKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSM 531

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           IS Y  C     A   F GM+  D+ +WN +I  +A N    +A  L   +Q+ + ++PD
Sbjct: 532 ISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQI-KGMKPD 590

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
             ++++L+ +C +    R  +  HGY+ R     D+ +  +L+D Y+K  ++  A  LF 
Sbjct: 591 AVSIMSLLPVCNELASFRLLKECHGYSFRSRFE-DVYLDGALLDAYAKCGAVDCAYKLFE 649

Query: 338 AIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
           + +   DLV + SMISG            +F  ML    +     + +IL +C+    ++
Sbjct: 650 S-SSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVD 708

Query: 386 FGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSC 437
            G +I H  +         I +   M  Y    DL+A       A+S +  +    D + 
Sbjct: 709 QGLNIFHSME-------EVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANI 761

Query: 438 WNIVIVAC 445
           W  ++ AC
Sbjct: 762 WGTLLGAC 769



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 7/286 (2%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L T  S+++ Y N      +L +F      D+ TWN MI    EN C    L  F  + 
Sbjct: 524 NLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQ 583

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +G++ D+ +++ ++    ++   +  +  H  S ++    D  L    ++ YAKCG ++
Sbjct: 584 IKGMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRS-RFEDVYLDGALLDAYAKCGAVD 642

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F      D V + +++SG   +   E+ L  F  M  SG + D+V ++S ++A +
Sbjct: 643 CAYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACS 702

Query: 186 CLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
             G +  G  + H++   +  +  P +     ++ + ++ G I+ A     GM  + D  
Sbjct: 703 HTGLVDQGLNIFHSMEEVIHIK--PTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDAN 760

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            W  ++   A     E    L+   +L  +   DI   V + +L A
Sbjct: 761 IWGTLLG--ACKTHHEVELGLVVAEKLFETKADDIGNYVVMSNLYA 804


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/730 (31%), Positives = 383/730 (52%), Gaps = 40/730 (5%)

Query: 78  IIVSALTQMNCLKQGRVVH-CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           +++ A      ++ GR +H  +S       D  L    + MYA CG    S   F  M  
Sbjct: 48  LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107

Query: 137 ADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
            + + WN ++SG   N  Y +   ++   +  +  Q DN +  S + A   + ++  G+V
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH + IK+G     +V   N+L+ MY +CG ++ A + F  M   ++VSWN++I  F+ N
Sbjct: 168 IHGMVIKMGLVLDVFVG--NALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSEN 225

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G   ++FDLL EM     + PD+ TVVT++ +CA    +  G  +HG A++  L  ++++
Sbjct: 226 GFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMV 285

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            N+++  YSK   L++A++ F      N +VSWN+MIS             L +EM    
Sbjct: 286 NNAMVYMYSKCGYLNEAQMSFVKNNNKN-VVSWNTMISAFSLEGDVNEAFNLLQEMQIQG 344

Query: 364 SQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
            +   +  T+L +LP+C     L   K +H +  +  F +  +  NA +  Y  CG L +
Sbjct: 345 EEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELS-NAFILAYAKCGALNS 403

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +   I   +  S WN +I    QNG  ++A+     MT      PD  T+ +++ AC
Sbjct: 404 AEKVFHGIGDKT-VSSWNALIGGHAQNGDPRKALHLLFQMTYS-GQQPDWFTISSLLLAC 461

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +L+    GK +HG  L++ +  D  V  +L++ Y  C    SA  +F+   + NL +WN
Sbjct: 462 AHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWN 521

Query: 542 CMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MIS +SQN     +L LFR       + +EI+IVS+  AC+QL  LR GK+ HG+V   
Sbjct: 522 AMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKA 581

Query: 599 GFQENSFISSALLDMY--SNC-------------KSNAAWSSMISAYGYHGKGWEAIELF 643
              E++F+  +++DMY  S C             K+ A+W+++I A+G HG G EAIEL+
Sbjct: 582 LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELY 641

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             M   G  P + + I +L AC H+GLV+EGL+Y+  M     + P+ EH+ C++DML R
Sbjct: 642 ERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLAR 701

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G+L +A   +  +P +    +W ++L +C   G  ++G++VA+ L +LEP+    Y+ L
Sbjct: 702 AGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLL 761

Query: 764 SNMYVALGRW 773
           SN+Y  LG+W
Sbjct: 762 SNLYAGLGKW 771



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 244/504 (48%), Gaps = 22/504 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +    +L+  Y      + ++ +F      ++V+WN+MI A  EN          
Sbjct: 176 GLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLL 235

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM+ EEG+  D  T++ I+        +  G  +H L++K G+  +  + N  V MY+K
Sbjct: 236 MEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSK 295

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG LN ++ +F   +  + VSWNT++S         +     +EM   GE+     ++  
Sbjct: 296 CGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTIL 355

Query: 181 VAASACLGELSYG--KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
               ACL +L     K +H    +  ++   +V ++N+ I  Y++CG + +AE+ F G+ 
Sbjct: 356 NVLPACLDKLQLRSLKELHGYSFRHCFQ---HVELSNAFILAYAKCGALNSAEKVFHGIG 412

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K V SWNA+I G A NG   +A  LL +M      +PD  T+ +L+  CA    L+ G+
Sbjct: 413 DKTVSSWNALIGGHAQNGDPRKALHLLFQMT-YSGQQPDWFTISSLLLACAHLKSLQYGK 471

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +HGY +R  L  D  +  SL+  Y      S A +LF+ +   N LVSWN+MISG    
Sbjct: 472 EIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKN-LVSWNAMISGYSQN 530

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF++ L    Q     ++++  +C+   +L  GK  H + LK   + +    
Sbjct: 531 GLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG 590

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            +++ MY   G +  +  +   +  + + + WN +IVA   +GH +EAI+ ++ M ++  
Sbjct: 591 CSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIVAHGIHGHGKEAIELYERM-KKVG 648

Query: 467 ASPDSVTLVNVISACGNLELAFEG 490
             PD  T + ++ ACG+  L  EG
Sbjct: 649 QMPDRFTYIGILMACGHAGLVEEG 672



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 10/356 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R    H+  S + + AY+      S+  +F+   +K V +WNA+I    +N      LH 
Sbjct: 379 RHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHL 438

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +M   G + D  T+  ++ A   +  L+ G+ +H   ++ G+  D  +    ++ Y  
Sbjct: 439 LFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIH 498

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG  +S+   F  M   + VSWN ++SG   N  P + L  FR+    G Q+  +++ S 
Sbjct: 499 CGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSV 558

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A + L  L  GK  H   +K    +  +V    S+I MY++ G I+ + + F G+  K
Sbjct: 559 FGACSQLSALRLGKEAHGYVLKALQTEDAFVGC--SIIDMYAKSGCIKESRKVFDGLKDK 616

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--- 297
           +V SWNAII    ++G  +EA +L   M+ +  + PD  T + ++  C  + L+ EG   
Sbjct: 617 NVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM-PDRFTYIGILMACGHAGLVEEGLKY 675

Query: 298 -RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            + +  +    L+   L     L+D  +++  L  A  L N +    D   W+S++
Sbjct: 676 FKEMQNF---NLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/723 (28%), Positives = 385/723 (53%), Gaps = 37/723 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G  +H     + +  D  + N+ ++MYAKCG+ NS++  F  M   D  SWN ++ G
Sbjct: 120 LGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGG 179

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + +   E+      +M   G + D  +    + A A    +  G  + +L +  G++  
Sbjct: 180 YVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTD 239

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V    +LI+M+ +CG ++ A + F  +  +D+++W ++I G A + +F++A +L   M
Sbjct: 240 LFVGT--ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVM 297

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V+PD    V+L+  C     L +G+ VH       L  ++ +  +L+  Y+K  S
Sbjct: 298 E-EEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGS 356

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           +  A  +FN +   N +VSW +MI+G             F +M+    + +  T ++IL 
Sbjct: 357 MEDALEVFNLVKGRN-VVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILG 415

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C+ P +L+ G+ IH   +K G+  +     AL+ MY  CG L+ A ++ +RIS   +  
Sbjct: 416 ACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVV 474

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I A  Q+  +  A+ TF+++ ++    PDS T  ++++ C + +    GK +  L
Sbjct: 475 AWNAMITAYVQHEKYDNAVATFQALLKE-GIKPDSSTFTSILNVCKSPDALELGKWVQSL 533

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +++    D  ++NAL++M+  C D+ SA  +F      +L +WN +I+ F Q+     A
Sbjct: 534 IIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFA 593

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
            + F+ ++    +P++I+   +L+AC     L  G+++H  +       +  + + L+ M
Sbjct: 594 FDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISM 653

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               K+  +W+SMI+ Y  HG+G EA+ELF +M   G++P   + 
Sbjct: 654 YTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITF 713

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +  LSAC+H+GL+ EGL ++ +M +++++ P  EH+ C+VD+ GR+G L EA EFI  + 
Sbjct: 714 VGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQ 772

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++P   +WGA+L AC  H D ++ ++VA+   +L+P + G Y+ LSN+Y A G WK+  +
Sbjct: 773 VKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTK 832

Query: 779 IGK 781
           + K
Sbjct: 833 MRK 835



 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 193/670 (28%), Positives = 334/670 (49%), Gaps = 42/670 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L++ Y+      S+  +F E  +KDV +WN ++   V++R          +MV++G++ D
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T + +++A      + +G  +  L + AG   D  +    +NM+ KCG ++ +   F+
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264

Query: 133 GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +   D ++W ++++G   H  + + C L F+ M   G Q D V+  S + A      L 
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNL-FQVMEEEGVQPDKVAFVSLLKACNHPEALE 323

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +HA   ++G +   YV    +L+SMY++CG +E A   F  +  ++VVSW A+I G
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGT--ALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAG 381

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA +G+ EEAF   ++M +   +EP+  T ++++  C+    L++GR +H   I+     
Sbjct: 382 FAQHGRMEEAFLFFNKM-IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
           D  +  +L+  Y+K  SL  A  +F  I+  N +V+WN+MI+   +   Y  +  +F  L
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFERISKQN-VVAWNAMITAYVQHEKYDNAVATFQAL 499

Query: 372 L------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L            +IL  C SP++LE GK +    ++ GF ++    NAL+ M++NCGDL
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
           ++A +L   +    D   WN +I    Q+G  Q A   FK M Q+    PD +T   +++
Sbjct: 560 MSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFAFDYFK-MMQESGVKPDQITFTGLLN 617

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC + E   EG+ LH L  ++ +  D  V   LI+MY +C  I  A  VF +    N+ +
Sbjct: 618 ACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYS 677

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  MI+ ++Q+     ALELF  ++ E   P+ I+ V  LSAC   G+++ G      + 
Sbjct: 678 WTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG------LH 731

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           H    ++  I   +            +  M+  +G  G   EA+E  ++M    ++P   
Sbjct: 732 HFESMKDFNIEPRM----------EHYGCMVDLFGRAGLLHEAVEFINKM---QVKPDSR 778

Query: 657 SVISLLSACS 666
              +LL AC 
Sbjct: 779 LWGALLGACQ 788



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 275/596 (46%), Gaps = 32/596 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L   T+L+  +      + +L +F     +D++TW +MIT    +R      + F
Sbjct: 235 GWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLF 294

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EEG++ D    + ++ A      L+QG+ VH    + G+  +  +    ++MY KC
Sbjct: 295 QVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKC 354

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ +   + VSW  +++G   +   E+  L+F +M  SG + + V+  S +
Sbjct: 355 GSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  G+ IH   IK GY       V  +L+SMY++CG +  A   F  ++ ++
Sbjct: 415 GACSRPSALKQGRQIHDRIIKAGYITDD--RVRTALLSMYAKCGSLMDARNVFERISKQN 472

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV+WNA+I  +  + K++ A      + L   ++PD +T  +++++C     L  G+ V 
Sbjct: 473 VVAWNAMITAYVQHEKYDNAVATFQAL-LKEGIKPDSSTFTSILNVCKSPDALELGKWVQ 531

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
              IR     DL + N+L+  +     L  A  LFN + P  DLVSWN++I+G  +   +
Sbjct: 532 SLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM-PERDLVSWNTIIAGFVQ---H 587

Query: 362 LCSQFSFS---------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
             +QF+F                T   +L +C SPE+L  G+ +H    +     + +  
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             L+ MY  CG +  A  +   +    +   W  +I    Q+G  +EA++ F  M QQ+ 
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGRGKEALELFCQM-QQEG 705

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
             PD +T V  +SAC +  L  EG  LH         ++ R+++   ++ ++GR   +  
Sbjct: 706 VKPDWITFVGALSACAHAGLIKEG--LHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHE 763

Query: 525 ASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELF--RHLEFEPNEISIVSILS 577
           A           +   W  ++ A  Q   +V   E    + LE +PN+  +  ILS
Sbjct: 764 AVEFINKMQVKPDSRLWGALLGA-CQVHLDVELAEKVAQKKLELDPNDDGVYVILS 818



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 235/498 (47%), Gaps = 25/498 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   T+LL+ Y+     E +L +F     ++VV+W AMI    ++  +     FF
Sbjct: 336 GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFF 395

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+E GI  +  T + I+ A ++ + LKQGR +H   IKAG I D  +    ++MYAKC
Sbjct: 396 NKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC 455

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   + V+WN +++  + +   +  +  F+ +   G + D+ + +S +
Sbjct: 456 GSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSIL 515

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L  GK + +L I+ G+E    + + N+L+SM+  CGD+ +A   F  M  +D
Sbjct: 516 NVCKSPDALELGKWVQSLIIRAGFESD--LHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN II GF  +G+ + AFD    MQ    V+PD  T   L++ CA    L EGR +H
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQ-ESGVKPDQITFTGLLNACASPEALTEGRRLH 632

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                  L  D+++   L+  Y+K  S+  A L+F+ + P  ++ SW SMI+G       
Sbjct: 633 ALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNL-PKKNVYSWTSMITGYAQHGRG 691

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF +M     +  + T +  L +C       E L   +S+  + ++    +    
Sbjct: 692 KEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEH---- 747

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQ 464
              ++ ++   G L  A   + ++    D+  W  ++ AC  +   + A K   K +   
Sbjct: 748 YGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELD 807

Query: 465 QNASPDSVTLVNVISACG 482
            N     V L N+ +A G
Sbjct: 808 PNDDGVYVILSNIYAAAG 825



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 247/540 (45%), Gaps = 50/540 (9%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIA----TVVTLISLCADSLLL 294
           K+    NA ++  +  G+  EA      M ++ SV+ P I     T  +L+ LC     L
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEA------MLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNL 120

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +G  +H +     +  D+ M N L+  Y+K  + + A+ +F+ + P  D+ SWN ++ G
Sbjct: 121 GDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM-PDKDVYSWNLLLGG 179

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       L ++M+    +    T + +L +C   ++++ G  +    L  G+  +
Sbjct: 180 YVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTD 239

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                AL++M+I CG +  A  +   +    D   W  +I    ++  F++A   F+ M 
Sbjct: 240 LFVGTALINMHIKCGGVDDALKVFNNLPRR-DLITWTSMITGLARHRQFKQACNLFQVM- 297

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCR 520
           +++   PD V  V+++ AC + E   +GK +H  A    +GLDT   V  AL++MY +C 
Sbjct: 298 EEEGVQPDKVAFVSLLKACNHPEALEQGKRVH--ARMKEVGLDTEIYVGTALLSMYTKCG 355

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILS 577
            ++ A  VF      N+ +W  MI+ F+Q+     A   F  +     EPN ++ +SIL 
Sbjct: 356 SMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILG 415

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSN-AA 622
           AC++   L+ G+QIH  +   G+  +  + +ALL MY+ C              K N  A
Sbjct: 416 ACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVA 475

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI+AY  H K   A+  F  +   GI+P  S+  S+L+ C     ++ G ++  +++
Sbjct: 476 WNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLI 534

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
                  +      +V M    G L  A     ++P +     W  +++    HG+ +  
Sbjct: 535 IRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/633 (33%), Positives = 345/633 (54%), Gaps = 38/633 (6%)

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   L ++  G+ IH   +KLG  D   VSV NSL++MY +CG +E A + F  M   
Sbjct: 116 IKAFGGLCDVYKGRQIHGHVLKLGVLDD--VSVVNSLLTMYWKCGVVEDAVQMFEKMPEV 173

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWN +I GF  +  +  +      M     + P+    V+ I  C+    L  GR +
Sbjct: 174 DLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREI 233

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL----VSWNSMISG-- 354
           HG  ++  L  +  +++SL++ Y K  S+  AE +FN+I   + +    V WN MISG  
Sbjct: 234 HGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYV 293

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF +M+    +  +ST++++   C+    + FGK IH    K G  NN  
Sbjct: 294 SNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIR 353

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ MY+ CGD+     + +R S N +   W+ VI  C Q+G   +A++ F    + 
Sbjct: 354 VETALLDMYLKCGDMGTGLKIFRR-SQNHNLIMWSAVISNCAQSGCPTKALELFYEF-KM 411

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           ++   DS  LV V+ AC +L L  EG  +HGLA K     D  V +AL+ +Y +CRD+  
Sbjct: 412 EDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGY 471

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ 581
           +  VF      +L +WN +IS ++Q++    AL+ FR ++ E   PN ++I  ILS C  
Sbjct: 472 SKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAH 531

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L V+   K++HG++   G      +S++L+  Y+ C               +++ +W+S+
Sbjct: 532 LSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSI 591

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I   G H +  E I LF +M  SGI+P   +  ++LSACSH+G VDEG +Y+ +M+E+++
Sbjct: 592 ILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFN 651

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           ++P+ E + C+VD+LGR+G L +AY+ I  +P  P   +WG++L +C +HGD  + + VA
Sbjct: 652 LKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVA 711

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             +FKL P +VGY + L+N+Y  LG+ ++  ++
Sbjct: 712 NHIFKLVPSSVGYRVLLANLYENLGKGREGSKV 744



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 187/689 (27%), Positives = 332/689 (48%), Gaps = 55/689 (7%)

Query: 63  EMVEEGIRFDSTTLLI-IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           +M+++G++ +       ++ A   +  + +GR +H   +K G++ D S+ N  + MY KC
Sbjct: 98  KMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKC 157

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSA 180
           G +  +   F  M   D VSWNT++SG   +    + L++FR M W  G   + V+  S+
Sbjct: 158 GVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSS 217

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + + + L  L++G+ IH + +K G +   Y  + +SLI MY +CG I+ AE  F  +  K
Sbjct: 218 ILSCSSLQSLTHGREIHGVVVKSGLDVEEY--LVSSLIEMYMKCGSIKNAENIFNSILDK 275

Query: 241 DVVS-----WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           D V      WN +I G+  NG F +A  L  +M ++  ++PD +T+V+L SLC++SL + 
Sbjct: 276 DSVRRNAVIWNVMISGYVSNGCFSQALLLFIKM-MVWGIKPDYSTMVSLFSLCSESLDIA 334

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--- 352
            G+ +HG   +  L  ++ +  +L+D Y K   +     +F   +  ++L+ W+++I   
Sbjct: 335 FGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRR-SQNHNLIMWSAVISNC 393

Query: 353 --SGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
             SG   + L L  +F           L+A+L +C+S      G  IH    K+GF ++ 
Sbjct: 394 AQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDV 453

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              +AL+ +Y  C D+  +  +  R+S   D   WN +I    Q+    EA+K F+ M Q
Sbjct: 454 FVGSALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALISGYAQDECADEALKAFRDM-Q 511

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            +   P++VT+  ++S C +L +    K +HG  ++  +G    V N+LI  Y +C DI 
Sbjct: 512 LEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDIN 571

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           S+   FE     N  +WN +I     +      + LF  +     +P+ ++  +ILSAC+
Sbjct: 572 SSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACS 631

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN-AAWSSMISAYGYHGKGWEA 639
             G +  G +              +  S + D   N K     ++ M+   G  G   +A
Sbjct: 632 HAGRVDEGCK--------------YFKSMVEDF--NLKPQLEQYTCMVDLLGRAGHLNQA 675

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL-QYYNNMLEEYDVRPETEHHVCIV 698
            +L   M  +   P      SLL +C + G  DE L +   N + +  V     + V + 
Sbjct: 676 YDLIMAMPCT---PDDRIWGSLLGSCKNHG--DEILAEIVANHIFKL-VPSSVGYRVLLA 729

Query: 699 DMLGRSGKLQEAYEF---IKNLPIQPKPG 724
           ++    GK +E  +    IK++ ++ KPG
Sbjct: 730 NLYENLGKGREGSKVRSEIKDMGLKKKPG 758



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/629 (23%), Positives = 288/629 (45%), Gaps = 38/629 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    SLLT Y      E ++ +F +    D+V+WN MI+   ++      L FF
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MV E GI  +    +  + + + +  L  GR +H + +K+G+  +  L +  + MY K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258

Query: 121 CGDLNSSECTFSGMHCADTVS-----WNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADN 174
           CG + ++E  F+ +   D+V      WN ++SG + N  + +  LL+ + M W G + D 
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVW-GIKPDY 317

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            ++ S  +  +   ++++GK IH L  K G +++  + V  +L+ MY +CGD+    + F
Sbjct: 318 STMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNN--IRVETALLDMYLKCGDMGTGLKIF 375

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                 +++ W+A+I   A +G   +A +L +E + M     D   +V ++  C+   L 
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFK-MEDGLADSGILVAVLRACSSLTLK 434

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            EG  +HG A +     D+ + ++L+D Y+K   +  ++ +F  ++   DLVSWN++ISG
Sbjct: 435 PEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS-QKDLVSWNALISG 493

Query: 355 L------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                        F++M     + +  T+  IL  C     +   K +H + ++ G  + 
Sbjct: 494 YAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGST 553

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            +  N+L+  Y  CGD+ ++    +++   +D S WN +I+    +    E I  F  M 
Sbjct: 554 VLVSNSLIATYAKCGDINSSLYTFEKMPERNDVS-WNSIILGMGMHSRTDEMIVLFDKMV 612

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 PD VT   ++SAC +     EG K    +     +         ++ + GR   
Sbjct: 613 -ASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGH 671

Query: 522 IKSASTVFESCYNCNLCT-----WNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSI 575
           +  A  +  +      CT     W  ++ +   +  E+ A  +  H+ +  P+ +    +
Sbjct: 672 LNQAYDLIMAM----PCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVL 727

Query: 576 LSACTQ-LGVLRHGKQIHGHVFHLGFQEN 603
           L+   + LG  R G ++   +  +G ++ 
Sbjct: 728 LANLYENLGKGREGSKVRSEIKDMGLKKK 756



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 39/347 (11%)

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N VI   T++G F +AI  +  M        +      +I A G L   ++G+ +HG  L
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K  +  D  V N+L+TMY +C  ++ A  +FE     +L +WN MIS F ++    R+L 
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196

Query: 559 LFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            FR + +E    PN ++ VS + +C+ L  L HG++IHG V   G     ++ S+L++MY
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMY 256

Query: 615 SNC-------------------KSNAA-WSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
             C                   + NA  W+ MIS Y  +G   +A+ LF +M   GI+P 
Sbjct: 257 MKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPD 316

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
            S+++SL S CS S  +  G Q +  ++ ++ ++        ++DM  + G +    +  
Sbjct: 317 YSTMVSLFSLCSESLDIAFGKQIH-GLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375

Query: 715 K-----NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +     NL +      W A++S C+  G      +  EL ++ + E+
Sbjct: 376 RRSQNHNLIM------WSAVISNCAQSG---CPTKALELFYEFKMED 413


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/806 (29%), Positives = 407/806 (50%), Gaps = 44/806 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  YS     + +  +F +  +++  +WN MI+  V        + FF  M E G+
Sbjct: 185 TNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGV 244

Query: 70  RFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              S  +  +V+A  +  C+ +G R +H   +K G++++  +    ++ Y   G ++ + 
Sbjct: 245 TPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEAN 304

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   + VSW ++M     N + ++ L  +R +  +G      ++++ +      G
Sbjct: 305 KLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFG 364

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           + + G  I    IK G  D+  VSV NSLISM+     +E A R F  M  +D +SWN+I
Sbjct: 365 DKTMGYQILGDVIKSGL-DTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSI 423

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I   A NG+FEE+   L     MR   P  D  T+  L+  C  +  L+ GR +HG   +
Sbjct: 424 ITASAHNGRFEES---LGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  ++ + NSL+  Y+++ S   AEL+F+ + P  DL+SWNSM++             
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM-PARDLISWNSMMASHVEDGKYSHAIL 539

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L  EML      ++ T    L +C + E L   K +H + +     +N I  N L+ MY 
Sbjct: 540 LLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYG 596

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G L+     + +I    D   WN +I     +      I+ F  M +++    + +T+
Sbjct: 597 KFG-LMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLM-RREGLLSNYITI 654

Query: 475 VNVISACGNLE-LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           VN++  C + + L   G  +H   + +   LDT VQ++LITMY +C D+ ++S +F+   
Sbjct: 655 VNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLA 714

Query: 534 NCNLCTWNCMISA---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           N N  TWN + SA   +   +  ++ +   R+   + ++ S    L+    L VL  G+Q
Sbjct: 715 NKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQ 774

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H  +  LGF+ + ++ +A +DMY  C               +S  +W+ +ISA   HG 
Sbjct: 775 LHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGF 834

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             +A E FHEM + G++P   + +SLLSACSH GLVDEGL Y+++M  E+ V    EH V
Sbjct: 835 FRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCV 894

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           CI+D+LGRSG+L EA  FI  +P+ P   VW ++L+AC  HG+ ++G++ A+ LF+L   
Sbjct: 895 CIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSS 954

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
           +   Y+  SN+  +  RW D   + K
Sbjct: 955 DDSAYVLYSNVCASTQRWGDVENVRK 980



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 191/766 (24%), Positives = 360/766 (46%), Gaps = 67/766 (8%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL--IIVSALTQMNCLKQGRVVHCLS 99
           N + T   EN  +  G+H F       IR  S   +   +    ++++    G+ +H L 
Sbjct: 121 NQLETCVKENEFLSYGIHTF-------IRNHSNPQVSRFLQKGFSEISEGNVGKALHALC 173

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           +K  +  ++   N  VNMY+K G +  ++  F  M+  +  SWN ++SG +   +  K +
Sbjct: 174 VKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAM 233

Query: 160 LYFREMGWSGEQADNVSLSSAVAA---SACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
            +F  M  +G    +  ++S V A   S C+ E +  + IH   +K G   + +V    S
Sbjct: 234 QFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGA--RQIHGYVVKCGLMSNVFVGT--S 289

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSV 274
           L+  Y   G +  A + F  +   ++VSW +++  +A NG  +E  ++   ++   +   
Sbjct: 290 LLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICT 349

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAE 333
              +ATV+    +  D  +   G  + G  I+  L    + + NSL+  +   +S+ +A 
Sbjct: 350 GNTMATVIRTCGMFGDKTM---GYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEAS 406

Query: 334 LLFNAIAPMNDLVSWNSMIS-----GLFKE-------MLYLCSQFSFSTLLAILPSCNSP 381
            +FN +    D +SWNS+I+     G F+E       M     +  + T+ A+LP+C S 
Sbjct: 407 RVFNNMQE-RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSA 465

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           + L++G+ +H    K G  +N    N+L+ MY   G    A  L+       D   WN +
Sbjct: 466 QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA-ELVFHTMPARDLISWNSM 524

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           + +  ++G +  AI     M + + A  + VT    +SAC NLE   + K +H   +   
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYNLE---KLKIVHAFVIHFA 580

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK---AEVRALE 558
           +  +  + N L+TMYG+   +  A  V +     ++ TWN +I   + +K   A ++A  
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFN 640

Query: 559 LFRHLEFEPNEISIVSILSACTQLG-VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           L R      N I+IV++L  C     +L+HG  IH H+   GF+ ++++ S+L+ MY+ C
Sbjct: 641 LMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQC 700

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K+++ W+++ SA  ++G G EA++    M N G+   + S    L
Sbjct: 701 GDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVAL 760

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +   +  ++DEG Q ++ +++   +  E + +V    +DM G+ G++ + +  +    I+
Sbjct: 761 ATIGNLTVLDEGQQLHSWIIK---LGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIR 817

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQV-AELL-FKLEPENVGYYISLS 764
            K   W  ++SA + HG  +   +   E+L   L+P++V +   LS
Sbjct: 818 SKRS-WNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLS 862



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 290/604 (48%), Gaps = 26/604 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++++   TSLL  Y        +  LF E    ++V+W +++    +N      L+ +
Sbjct: 279 GLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIY 338

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAK 120
             +   G+     T+  ++           G  +    IK+G+   S S+ N  ++M+  
Sbjct: 339 RHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGN 398

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              +  +   F+ M   DT+SWN+I++   HN   E+ L +F  M  +  + D +++S+ 
Sbjct: 399 YDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISAL 458

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      L +G+ +H L  K G E +  V V NSL+SMY+Q G  E AE  F  M  +
Sbjct: 459 LPACGSAQHLKWGRGLHGLITKSGLESN--VCVCNSLLSMYAQAGSSEDAELVFHTMPAR 516

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SWN+++     +GK+  A  LL EM   R    +  T  T +S C +   L + + V
Sbjct: 517 DLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM-NYVTFTTALSACYN---LEKLKIV 572

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + I   + ++L++ N+L+  Y K   + +A+ +   I P  D+V+WN++I G      
Sbjct: 573 HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK-IMPERDVVTWNALIGGHADDKD 631

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVN 407
                  F  M       ++ T++ +L +C SP+  L+ G  IH   +  GF  +T   +
Sbjct: 632 PNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQS 691

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY  CGDL  +  +   ++ N ++S WN +  A    G  +EA+K F +  +    
Sbjct: 692 SLITMYAQCGDLNTSSYIFDVLA-NKNSSTWNAIFSANAHYGPGEEALK-FIARMRNDGV 749

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D  +    ++  GNL +  EG+ LH   +K    LD  V NA + MYG+C +I     
Sbjct: 750 DLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFR 809

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGV 584
           +       +  +WN +ISA +++    +A E F     L  +P+ ++ VS+LSAC+  G+
Sbjct: 810 ILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGL 869

Query: 585 LRHG 588
           +  G
Sbjct: 870 VDEG 873



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 143/303 (47%), Gaps = 26/303 (8%)

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           GK+LH L +K ++  +T   N L+ MY +   IK A  VF+  Y+ N  +WN MIS F +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 550 NKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHG-KQIHGHVFHLGFQENS 604
                +A++ F H+ FE    P+   I S+++AC + G +  G +QIHG+V   G   N 
Sbjct: 226 VGWYHKAMQFFCHM-FENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 605 FISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNS 649
           F+ ++LL  Y    S +               +W+S++  Y  +G   E + ++  + ++
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G+  T +++ +++  C   G    G Q   ++++             ++ M G    ++E
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 710 AYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           A     N+  Q +  + W ++++A +H+G  +  + +    +         YI++S +  
Sbjct: 405 ASRVFNNM--QERDTISWNSIITASAHNG--RFEESLGHFFWMRRTHPKTDYITISALLP 460

Query: 769 ALG 771
           A G
Sbjct: 461 ACG 463


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/716 (32%), Positives = 379/716 (52%), Gaps = 40/716 (5%)

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
           L + +    D  L    + MY+ CG    S   F  +   +   WN ++SG + N   ++
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 158 CLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
            +  F E+    E Q DN +    + A     ++  GK +H + +K+G     +V   N+
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVG--NA 250

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRSVE 275
           +I++Y +CG ++ A   F  M  ++++SWN++I GF+ NG + EA+     + +    + 
Sbjct: 251 MIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLI 310

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD+AT+VTL+ +C+    +  G  +HG A++  L ++L++ N+L+D YSK   LS+A +L
Sbjct: 311 PDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAIL 370

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCS--------------QFSFSTLLAILPSCNSP 381
           F  I     +VSWNSMI    +E     +              + +  T+L +LP+C   
Sbjct: 371 FRKIEN-KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
             L   +++H + L+  F    +  NA +  Y  CG LV A  +   ++  S  S WN V
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS-VSSWNAV 488

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    QNG   +A+  +  MT+     PD  ++V+++ ACG L L   GK +HG  L++ 
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           + +++ V  +L+++Y  C       T FE+  + N   WN M+S +SQN+    AL LFR
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607

Query: 562 HL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS--- 615
            +     EP+EI+I SIL AC+QL  L  GK++H         E++F++ +L+DMY+   
Sbjct: 608 QMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSG 667

Query: 616 ------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                       N K  A+W+ MI+ +G HG+G +A+ELF +M  S  +P + + + +L 
Sbjct: 668 FLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQ 727

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           AC H+GLV EGL Y   M   Y + PE EH+ C++DMLGR+G+L EA  FI  +P +P  
Sbjct: 728 ACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDA 787

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +W ++LS+   + D +MG++ AE L  LE      YI LSN+Y   G+W D V +
Sbjct: 788 KIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKW-DVVRM 842



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 265/544 (48%), Gaps = 29/544 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  L    +++  Y    + + ++ LF +   +++++WN++I    EN   +     F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299

Query: 62  GEMVE--EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             ++E  +G+  D  T++ ++   +    +  G V+H +++K G++ +  +CN  ++MY+
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVS 176
           KCG L+ +   F  +     VSWN+++       +  +     R+M W  E   + + V+
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM-WMEEELMEVNEVT 418

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + + + A     EL   + +H   ++  ++    ++  N+ I+ Y++CG +  AE  F+G
Sbjct: 419 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN--NAFIAAYAKCGSLVFAEHVFFG 476

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  K V SWNA+I G A NG   +A D   EM  +  + PD  ++V+L+  C    LL+ 
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQY 535

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ +HG+ +R  L  +  +  SL+  Y   +        F  +   N  V WN+M+SG  
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNS-VCWNAMLSGYS 594

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF++ML    +     + +IL +C+   +L  GK +HC+ LK     +  
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +LM MY   G L  +  +  R+ +  + + WN++I     +G   +A++ F+ M ++
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRL-NGKEVASWNVMITGFGVHGQGNKAVELFEDM-KR 712

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRD 521
            +  PD  T + V+ AC +  L  EG  L+ LA +++L  L+  +++   +I M GR   
Sbjct: 713 SDKQPDRFTFLGVLQACCHAGLVSEG--LNYLAQMQTLYKLEPELEHYACVIDMLGRAGR 770

Query: 522 IKSA 525
           +  A
Sbjct: 771 LNEA 774


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 230/754 (30%), Positives = 386/754 (51%), Gaps = 90/754 (11%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD----------------------- 123
            C   G+V+H   ++ GM +D+ LCN  +++Y +CGD                       
Sbjct: 20  RCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFL 79

Query: 124 --------LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
                   L  +   F GM   D VSWN ++S  +   + EK L+ ++ M   G      
Sbjct: 80  TFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAF 234
           +L+S ++A + + +  +G   H + +K G + + +V   N+L+SMY++CG I +   R F
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG--NALLSMYAKCGFIVDYGVRVF 197

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA----- 289
             ++  + VS+ A+I G A   K  EA  +   M   + V+ D   +  ++S+ A     
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILSISAPREGC 256

Query: 290 DSLLL----REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           DSL        G+ +H  A+R   G DL + NSL++ Y+K+  ++ AEL+F A  P  ++
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF-AEMPEVNV 315

Query: 346 VSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
           VSWN MI G  +E                     S +S+EF   +       GF  N + 
Sbjct: 316 VSWNIMIVGFGQEY-------------------RSDKSVEFLTRMR----DSGFQPNEVT 352

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             +++      GD+     +   I   S  S WN ++   +   H++EAI  F+ M Q Q
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPS-VSAWNAMLSGYSNYEHYEEAISNFRQM-QFQ 410

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N  PD  TL  ++S+C  L     GK +HG+ +++ +  ++ + + LI +Y  C  ++ +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS 470

Query: 526 STVFESCYN-CNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACT 580
             +F+ C N  ++  WN MIS F  N  + +AL LFR +       PNE S  ++LS+C+
Sbjct: 471 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
           +L  L HG+Q HG V   G+  +SF+ +AL DMY  C               K+   W+ 
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI  YG++G+G EA+ L+ +M +SG +P   + +S+L+ACSHSGLV+ GL+  ++M   +
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + PE +H++CIVD LGR+G+L++A +  +  P +    +W  +LS+C  HGD  + ++V
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           AE L +L+P++   Y+ LSN Y +L +W D+  +
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 273/605 (45%), Gaps = 64/605 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           + LT    V     +  +F     +DVV+WN MI+  V        L  +  MV +G   
Sbjct: 77  AFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSECT 130
              TL  ++SA +++     G   H +++K G+  +  + N  ++MYAKCG + +     
Sbjct: 137 SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 196

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA----- 185
           F  +   + VS+  ++ G    N   + +  FR M   G Q D+V LS+ ++ SA     
Sbjct: 197 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC 256

Query: 186 -CLGEL---SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             L E+     GK IH L ++LG+    +++  NSL+ +Y++  D+  AE  F  M   +
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLN--NSLLEIYAKNKDMNGAELIFAEMPEVN 314

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I GF    + +++ + L  M+     +P+  T ++++  C  S  +  GR + 
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLGACFRSGDVETGRRI- 372

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
                                             F++I P   + +WN+M+SG       
Sbjct: 373 ----------------------------------FSSI-PQPSVSAWNAMLSGYSNYEHY 397

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F++M +   +   +TL  IL SC     LE GK IH   ++   S N+  V+ L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  C  +  +  +     +  D +CWN +I     N    +A+  F+ M Q     P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  +   V+S+C  L     G+  HGL +KS    D+ V+ AL  MY +C +I SA   F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           ++    N   WN MI  +  N     A+ L+R +     +P+ I+ VS+L+AC+  G++ 
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637

Query: 587 HGKQI 591
            G +I
Sbjct: 638 TGLEI 642



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 8/356 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T  S+L A       E+   +F       V  WNAM++           +  F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  + ++ D TTL +I+S+  ++  L+ G+ +H + I+  +  +S + +  + +Y++C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464

Query: 122 GDLNSSECTFSG-MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSS 179
             +  SEC F   ++  D   WN+++SG  HN    K L+ FR M  +     N  S ++
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +++ + L  L +G+  H L +K GY    +V    +L  MY +CG+I++A + F  +  
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE--TALTDMYCKCGEIDSARQFFDAVLR 582

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+ V WN +I G+  NG+ +EA  L  +M +    +PD  T V++++ C+ S L+  G  
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKM-ISSGEKPDGITFVSVLTACSHSGLVETGLE 641

Query: 300 VHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           +   +++R+ G +  + +   ++D   ++  L  AE L  A    +  V W  ++S
Sbjct: 642 ILS-SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/621 (33%), Positives = 344/621 (55%), Gaps = 35/621 (5%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H++ I  G   S   ++   L+ MY  CGD+    + F  +    V  WN ++
Sbjct: 110 LEDGKRVHSVIISNGI--SVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLM 167

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +A  G F E+  L  +MQ +  V  +  T   ++   A    ++E + VHGY ++   
Sbjct: 168 SEYAKIGNFRESVSLFKKMQKL-GVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGF 226

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G +  ++NSL+  Y K   +  A  LF+ ++   D+VSWNSMI+G            +F 
Sbjct: 227 GSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIFI 285

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +ML L  +   +TL+++L +C +  +L  G+++H + +K  FS   +  N L+ MY  CG
Sbjct: 286 QMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 345

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A  +  ++   +  S W  +I A  + G + +AI  F  M Q +   PD  T+ ++
Sbjct: 346 NLNGATEVFVKMGDTTIVS-WTSIIAAYVREGLYSDAIGLFDEM-QSKGVRPDIYTVTSI 403

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC       +G+ +H   +K+ MG +  V NALI MY +C  ++ A  VF      ++
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 463

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            +WN MI  +SQN     ALELF  ++  F+P++I++  +L AC  L  L  G++IHGH+
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHI 523

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G+  +  ++ AL+DMY+ C               K   +W+ MI+ YG HG G EAI
Sbjct: 524 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 583

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
             F+EM  +GI P +SS  ++L+ACSHSGL++EG +++N+M  E  V P+ EH+ C+VD+
Sbjct: 584 STFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 643

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           L R G L +AY+FI+++PI+P   +WG +LS C  H D K+ ++VAE +F+LEP+N  YY
Sbjct: 644 LARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYY 703

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           + L+N+Y    +W++  ++ K
Sbjct: 704 VVLANVYAEAEKWEEVKKLRK 724



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/607 (27%), Positives = 293/607 (48%), Gaps = 23/607 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y N         +F +  N  V  WN +++   +       +  F +M + G+  +
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   ++     +  +K+ + VH   +K G  +++++ N  +  Y K G + S+   F 
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   D VSWN++++GC+ N +    L  F +M   G + D  +L S + A A +G LS 
Sbjct: 255 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL 314

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ +H  G+K  + +   V  +N+L+ MYS+CG++  A   F  M    +VSW +II  +
Sbjct: 315 GRALHGFGVKACFSEE--VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
              G + +A  L  EMQ  + V PDI TV +++  CA S  L +GR VH Y I+  +G +
Sbjct: 373 VREGLYSDAIGLFDEMQ-SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 431

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLCSQ 365
           L + N+L++ Y+K  S+ +A L+F+ I P+ D+VSWN+MI G  + +       L+L  Q
Sbjct: 432 LPVTNALINMYAKCGSVEEARLVFSKI-PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ 490

Query: 366 FSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             F     T+  +LP+C    +L+ G+ IH   L+ G+ ++     AL+ MY  CG LV 
Sbjct: 491 KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVL 550

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  L   I    D   W ++I     +G   EAI TF  M +     PD  +   +++AC
Sbjct: 551 AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEM-RIAGIEPDESSFSAILNAC 608

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLC 538
            +  L  EG      ++++  G++ ++++   ++ +  R  ++  A    ES     +  
Sbjct: 609 SHSGLLNEGWKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTT 667

Query: 539 TWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILSAC-TQLGVLRHGKQIHGHVF 596
            W  ++S    +     A ++  H+ E EP+      +L+    +       K++   + 
Sbjct: 668 IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQ 727

Query: 597 HLGFQEN 603
             GF++N
Sbjct: 728 KRGFKQN 734



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 257/516 (49%), Gaps = 24/516 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ VH + I  G+  D +L    V MY  CGDL      F  +       WN +MS 
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 169

Query: 149 CLH-NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
                N+ E   L F++M   G   +  + +  +   A LG++   K +H   +KLG+  
Sbjct: 170 YAKIGNFRESVSL-FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 228

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +   +V NSLI+ Y + G +E+A   F  ++  DVVSWN++I+G  +NG      ++  +
Sbjct: 229 N--TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 286

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M L+  VE D+ T+V+++  CA+   L  GR++HG+ ++     +++  N+L+D YSK  
Sbjct: 287 M-LILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 345

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAIL 375
           +L+ A  +F  +     +VSW S+I+            GLF EM     +    T+ +I+
Sbjct: 346 NLNGATEVFVKMGDTT-IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 404

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    SL+ G+ +H + +K G  +N    NAL++MY  CG +  A  +  +I    D 
Sbjct: 405 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP-VKDI 463

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I   +QN    EA++ F  M  Q+   PD +T+  V+ AC  L    +G+ +HG
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREIHG 521

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             L+     D  V  AL+ MY +C  +  A  +F+     +L +W  MI+ +  +     
Sbjct: 522 HILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNE 581

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           A+  F  +     EP+E S  +IL+AC+  G+L  G
Sbjct: 582 AISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG 617



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 242/499 (48%), Gaps = 37/499 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++     SL+ AY      ES+  LF E    DVV+WN+MI  CV N     GL  F
Sbjct: 225 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  G+  D TTL+ ++ A   +  L  GR +H   +KA    +    N  ++MY+KC
Sbjct: 285 IQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+LN +   F  M     VSW +I++  +        +  F EM   G + D  +++S V
Sbjct: 345 GNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 404

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A AC   L  G+ +H+  IK G   +  + VTN+LI+MY++CG +E A   F  +  KD
Sbjct: 405 HACACSSSLDKGRDVHSYVIKNGMGSN--LPVTNALINMYAKCGSVEEARLVFSKIPVKD 462

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN +I G++ N    EA +L  +MQ  +  +PD  T+  ++  CA    L +GR +H
Sbjct: 463 IVSWNTMIGGYSQNLLPNEALELFLDMQ--KQFKPDDITMACVLPACAGLAALDKGREIH 520

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ +RR    DL +  +L+D Y+K   L  A+LLF+ I P  DL+SW  MI+G       
Sbjct: 521 GHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI-PKKDLISWTVMIAGYGMHGFG 579

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F EM     +   S+  AIL +C+    L  G     W+       N  GV   
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG-----WKF-FNSMRNECGVEPK 633

Query: 410 MHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           +  Y    DL+A       A+  ++ +    DT+ W +++  C  +   + A K  + + 
Sbjct: 634 LEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF 693

Query: 463 QQQNASPDS----VTLVNV 477
           + +   PD+    V L NV
Sbjct: 694 ELE---PDNTRYYVVLANV 709



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 237/525 (45%), Gaps = 45/525 (8%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA I+ F   G    A +LL +    +S E  + +  +++ LCA+   L +G+ VH   I
Sbjct: 65  NAKINKFCEMGDLRNAIELLTKS---KSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII 121

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS-WNSMIS----------- 353
              +  D  +   L+  Y     L +   +F+ I  MND V  WN ++S           
Sbjct: 122 SNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKVFLWNLLMSEYAKIGNFRES 179

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LFK+M  L    +  T   +L    +   ++  K +H + LKLGF +NT  VN+L+  
Sbjct: 180 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 239

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G + +A +L   +S   D   WN +I  C  NG     ++ F  M        D  
Sbjct: 240 YFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIFIQML-ILGVEVDLT 297

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV+V+ AC N+     G++LHG  +K+    +    N L+ MY +C ++  A+ VF   
Sbjct: 298 TLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 357

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
            +  + +W  +I+A+ +      A+ LF  ++     P+  ++ SI+ AC     L  G+
Sbjct: 358 GDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 417

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H +V   G   N  +++AL++MY+ C               K   +W++MI  Y  + 
Sbjct: 418 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNL 477

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              EA+ELF +M     +P   ++  +L AC+    +D+G + + ++L        ++ H
Sbjct: 478 LPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLH 533

Query: 695 V--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           V   +VDM  + G L  A      +P +     W  M++    HG
Sbjct: 534 VACALVDMYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYGMHG 577



 Score = 43.1 bits (100), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 18/159 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+ + L  + +L+  Y+       +  LF     KD+++W  MI           G+H 
Sbjct: 526 RGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG--------YGMHG 577

Query: 61  FG--------EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLC 111
           FG        EM   GI  D ++   I++A +    L +G +  + +  + G+       
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 637

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
              V++ A+ G+L+ +      M    DT  W  ++SGC
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 676


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 244/776 (31%), Positives = 408/776 (52%), Gaps = 44/776 (5%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN++I    + +     L  + +M   GI  DS T+ +++ A  ++N +  G  +H    
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG---CLHNNYPEK 157
              +I D  +    V+ Y KCG +  +   F  M   D VSWN ++SG   CL   Y E 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCL--CYKEA 145

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            LL F EM  +G   ++ ++ + + A   + EL  G+ IH   ++ G  D     V  +L
Sbjct: 146 VLL-FVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMD-AYVGTAL 203

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           +  Y +  D   + R F  M  +++VSWNAII GF   G   +A  L   M L+  ++ D
Sbjct: 204 VGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSM-LIEGIKFD 261

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
             T++ +I  CA+   LR G  +H  AI+  L  DL ++N+L++ YS + SL  +  LFN
Sbjct: 262 AVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN 321

Query: 338 AIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNS-PESL 384
           A+ P +D   WNSMIS             LF +M     +    T+  +L  CN   +  
Sbjct: 322 AV-PTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGS 380

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
            +G+ +H   +K G   +    NAL+ MY+    + AA  + +++    D   WN +I A
Sbjct: 381 IWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM-RGLDVISWNTMISA 439

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             Q+    +A + F  M + +    +S T+V++++ C +      G+S+HG A+K+ + +
Sbjct: 440 FAQSMFRAKAFELFLMMCESE-IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
           +T +  +L  MY  C D ++A+ +F  C   +L +WN +IS++ +N    +AL LF H+ 
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH--LGFQENSFISSALLDMYSNC--- 617
            E EPN ++I++IL++CTQL  L  G+ +H +     +  + ++ +++A + MY+ C   
Sbjct: 559 SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKL 618

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +S  +W++MI+ YG HG+G +A   F +M + G +P   S  S+LSAC
Sbjct: 619 QYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSAC 678

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGL   GLQ +++M+ ++ + P+  H+ C+VD+LGR G   EA  FI ++PI+P   +
Sbjct: 679 SHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASI 738

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           W A+LS+C    + K+ + +   L +LEP N G +I LSN+Y A G W + V+I K
Sbjct: 739 WRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 192/677 (28%), Positives = 326/677 (48%), Gaps = 51/677 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y        +  +F E   +D+V+WNA+I+  V   C    +  F EM + G+ 
Sbjct: 99  TALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLT 158

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSEC 129
            +S T++ ++ A  +M  L+ G+ +H   ++ G+   D+ +    V  Y +  D   S  
Sbjct: 159 PNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHR 217

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            FS M   + VSWN I++G L+     K L  +  M   G + D V++   + A A  G 
Sbjct: 218 VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGC 277

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  +H L IK    +  +  + N+L++MYS  G +E++   F  +   D   WN++I
Sbjct: 278 LRLGMQLHQLAIKFNLINDLF--ILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMI 335

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE----GRSVHGYAI 305
             +   G   EA  L  +M+L R ++ D+ T+  ++SLC D   L +    GR +H +A+
Sbjct: 336 SSYIGFGFHAEAIALFIKMRLER-IKEDVRTIAIMLSLCND---LNDGSIWGRGLHAHAM 391

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------F 356
           +  +  D  + N+L+  Y K N ++ A+ +F  +  + D++SWN+MIS           F
Sbjct: 392 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL-DVISWNTMISAFAQSMFRAKAF 450

Query: 357 KEMLYLCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           +  L +C    +F+  T++++L  C     L FG+SIH + +K G   NT    +L  MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
           INCGD  AA ++  R     D   WN +I +  +N +  +A+  F  M  +    P+SVT
Sbjct: 511 INCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVT 567

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYGRCRDIKSASTVFES 531
           ++N++++C  L     G+ LH    +  + L  D  + NA ITMY RC  ++ A  +F +
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               ++ +WN MI+ +  +     A   F  +    F+PN +S  S+LSAC+  G+   G
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            Q+    FH           +++  +        +  M+   G  G   EAI   + M  
Sbjct: 688 LQL----FH-----------SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSM-- 730

Query: 649 SGIRPTKSSVISLLSAC 665
             I P  S   +LLS+C
Sbjct: 731 -PIEPDASIWRALLSSC 746



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +TSL   Y N     ++  +F     +D+V+WN++I++ ++N      L  F  M+ E +
Sbjct: 503 NTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-L 561

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK--AGMIADSSLCNVFVNMYAKCGDLNSS 127
             +S T++ I+++ TQ+  L  G+ +H  + +    +  D+SL N F+ MYA+CG L  +
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  +     VSWN +++G   +       L F +M   G + +NVS +S ++A +  
Sbjct: 622 EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHS 681

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G       +   G++L                 +S   D   A +         +  +  
Sbjct: 682 G-------LTVTGLQL----------------FHSMVRDFGIAPQ---------LTHYGC 709

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           ++D     G F EA   ++ M     +EPD +    L+S C
Sbjct: 710 MVDLLGRGGHFSEAIAFINSM----PIEPDASIWRALLSSC 746


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/716 (32%), Positives = 378/716 (52%), Gaps = 40/716 (5%)

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
           L + +    D  L    + MY+ CG    S   F  +   +   WN ++SG + N   ++
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 158 CLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
            +  F E+    E Q DN +    + A     ++  GK +H + +K+G     +V   N+
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVG--NA 250

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRSVE 275
           +I++Y +CG ++ A   F  M  ++++SWN++I GF+ NG + EA+     + +    + 
Sbjct: 251 MIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLI 310

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD+AT+VTL+ +C+    +  G  +HG A++  L ++L++ N+L+D YSK   LS+A +L
Sbjct: 311 PDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAIL 370

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCS--------------QFSFSTLLAILPSCNSP 381
           F  I     +VSWNSMI    +E     +              + +  T+L +LP+C   
Sbjct: 371 FRKIEN-KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
             L   +++H + L+  F    +  NA +  Y  CG LV A  +   ++  S  S WN V
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKS-VSSWNAV 488

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    QNG   +A+  +  MT+     PD  ++V+++ ACG L L   GK +HG  L++ 
Sbjct: 489 IGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG 547

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           + +++ V  +L+++Y  C       T FE   + N   WN M+S +SQN+    AL LFR
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFR 607

Query: 562 HL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS--- 615
            +     EP+EI+I SIL AC+QL  L  GK++H         E++F++ +L+DMY+   
Sbjct: 608 QMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSG 667

Query: 616 ------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                       N K  A+W+ MI+ +G HG+G +A+ELF +M  S  +P + + + +L 
Sbjct: 668 FLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQ 727

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           AC H+GLV EGL Y   M   Y + PE EH+ C++DMLGR+G+L EA  FI  +P +P  
Sbjct: 728 ACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDA 787

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +W ++LS+   + D +MG++ AE L  LE      YI LSN+Y   G+W D V +
Sbjct: 788 KIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKW-DVVRM 842



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 265/544 (48%), Gaps = 29/544 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  L    +++  Y    + + ++ LF +   +++++WN++I    EN   +     F
Sbjct: 240 GLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAF 299

Query: 62  GEMVE--EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             ++E  +G+  D  T++ ++   +    +  G V+H +++K G++ +  +CN  ++MY+
Sbjct: 300 RSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYS 359

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVS 176
           KCG L+ +   F  +     VSWN+++       +  +     R+M W  E   + + V+
Sbjct: 360 KCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKM-WMEEELMEVNEVT 418

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + + + A     EL   + +H   ++  ++    ++  N+ I+ Y++CG +  AE  F+G
Sbjct: 419 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN--NAFIAAYAKCGSLVFAEHVFFG 476

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  K V SWNA+I G A NG   +A D   EM  +  + PD  ++V+L+  C    LL+ 
Sbjct: 477 MNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL-GILPDDFSIVSLLLACGRLGLLQY 535

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ +HG+ +R  L  +  +  SL+  Y   +        F  +   N  V WN+M+SG  
Sbjct: 536 GKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNS-VCWNAMLSGYS 594

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF++ML    +     + +IL +C+   +L  GK +HC+ LK     +  
Sbjct: 595 QNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNF 654

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +LM MY   G L  +  +  R+ +  + + WN++I     +G   +A++ F+ M ++
Sbjct: 655 VACSLMDMYAKSGFLGHSQRIFNRL-NGKEVASWNVMITGFGVHGQGNKAVELFEDM-KR 712

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRD 521
            +  PD  T + V+ AC +  L  EG  L+ LA +++L  L+  +++   +I M GR   
Sbjct: 713 SDKQPDRFTFLGVLQACCHAGLVSEG--LNYLAQMQTLYKLEPELEHYACVIDMLGRAGR 770

Query: 522 IKSA 525
           +  A
Sbjct: 771 LNEA 774


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 253/820 (30%), Positives = 416/820 (50%), Gaps = 85/820 (10%)

Query: 39  VTWNAMITA-CVENRCVVMGLHFFGEMVEEGIRF--DSTTLLIIVSALTQMNCLKQGRVV 95
           +TW + I + CV++R     L FF   +++   F  D   L  I+ + + +     G+ +
Sbjct: 1   MTWASTIRSLCVDSRHN-EALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCL 59

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +K G ++        +NMYAKCG L+     F      D V WN ++SG   +   
Sbjct: 60  HSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKN 119

Query: 156 EKCLL-YFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           +  ++  FR M  SGE    +V++++ +   A  G L+ GK +H   IK G+E   +   
Sbjct: 120 DADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAG- 178

Query: 214 TNSLISMYSQCGDIEA-AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
            N+L+SMY++CG +   A   F  +  KDVVSWNA+I G A NG  +EAF L   + +  
Sbjct: 179 -NALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLF-SLMMKG 236

Query: 273 SVEPDIATVVTLISLCA---DSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNS 328
           SV+P+ ATV  ++ +CA   +++  R GR +H Y ++   L  D+ + N+L+ FY K   
Sbjct: 237 SVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGR 296

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS-------------TLLAIL 375
             +AE LF A+    DLVSWN++I+G      +L S   F              T+++IL
Sbjct: 297 TKEAESLFWAM-DARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSIL 355

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           P+C   ++L+ GK +H + L+  F   +T   NAL+  Y  CG +  A+     IS   D
Sbjct: 356 PACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRK-D 414

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN ++ A  +  H    +     M  + +  PDSVT++ +I  C +L    + K +H
Sbjct: 415 LISWNSILDAFGEKRHHSRFLSLLHVML-KLDIRPDSVTILTIIHFCASLLRVKKVKEIH 473

Query: 495 GLALKS---LMGLDTRVQNALITMYGRCRDIKSASTVFE--------------------- 530
           G +++S   L      V NA++  Y +C +I+ A+ +F+                     
Sbjct: 474 GYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGL 533

Query: 531 -SCYNCN----------LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
            S Y+ N          L TWN M+  +++N    +ALELF  L+    +P+ ++I+S++
Sbjct: 534 GSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLI 593

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             CTQ+  +   +Q HG++    F E+  +   LLD Y+ C               K   
Sbjct: 594 PVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLV 652

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            +++MI  Y  HG   +A+E F  M N GI+P      S+LSACSH+G + EGL+ ++++
Sbjct: 653 MFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSI 712

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            + + ++P  E   C+VD+L R G + EAY F+  +PI+    +WG +L AC  + + ++
Sbjct: 713 EKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVEL 772

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           G+ VA+ LFK+E  ++G YI LSN+Y A  RW   +E+ K
Sbjct: 773 GRIVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRK 812



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 298/645 (46%), Gaps = 72/645 (11%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA---CVENRCVVM----GLHFF 61
           TS +LL  Y+     +    LF +    D V WN +++      +N   VM     +H  
Sbjct: 74  TSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSS 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           GE++       S T+  ++    +   L  G+ VH   IK+G   D+   N  V+MYAKC
Sbjct: 134 GEVMPS-----SVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKC 188

Query: 122 GDLN-SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G +   +   F  +   D VSWN +++G   N   ++    F  M     + +  ++++ 
Sbjct: 189 GLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANI 248

Query: 181 VAASACLGE-LSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +   A   E +++  G+ IH+  ++   E S  VSV N+L+S Y + G  + AE  FW M
Sbjct: 249 LPVCASFDENIAHRCGRQIHSYVLQWP-ELSADVSVCNALLSFYLKVGRTKEAESLFWAM 307

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D+VSWN II G+ALNG++ ++  +   +  +  +  D  T+V+++  CA    L+ G
Sbjct: 308 DARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAG 367

Query: 298 RSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           + VH Y +R   L  D    N+L+ FY+K   + +A   F+ I+   DL+SWNS++    
Sbjct: 368 KQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMIS-RKDLISWNSILDAFG 426

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG----FS 400
                     L   ML L  +    T+L I+  C S   ++  K IH + ++ G     +
Sbjct: 427 EKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCAT 486

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHN---------------------------- 432
             T+G NA++  Y  CG++  A  + Q +S                              
Sbjct: 487 APTVG-NAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSG 545

Query: 433 ---SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +D + WN+++    +N   ++A++ F  + Q Q   PD VT++++I  C  +     
Sbjct: 546 MSETDLTTWNLMVRVYAENDCPEQALELFLKL-QTQGMKPDVVTIMSLIPVCTQMASVHL 604

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            +  HG  ++S    D  ++  L+  Y +C  I  A  +F+S  + +L  +  MI  ++ 
Sbjct: 605 LRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAM 663

Query: 550 NKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQI 591
           +    +ALE F H   +  +P+ +   SILSAC+  G +  G +I
Sbjct: 664 HGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKI 708



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 221/491 (45%), Gaps = 55/491 (11%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A +    +LL+ Y  V   + + +LF+    +D+V+WN +I     N   +  LH FG +
Sbjct: 279 ADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNL 338

Query: 65  VE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCG 122
           V  E +  DS T++ I+ A  Q++ L+ G+ VH   ++   +  D+S  N  V+ YAKCG
Sbjct: 339 VSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCG 398

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +  TFS +   D +SWN+I+       +  + L     M     + D+V++ + + 
Sbjct: 399 YIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIH 458

Query: 183 ASACLGELSYGKVIHALGIKLGY---EDSPYVSVTNSLISMYSQCGDIEAAERAFW---- 235
             A L  +   K IH   I+ G      +P  +V N+++  YS+CG+IE A + F     
Sbjct: 459 FCASLLRVKKVKEIHGYSIRSGSLLCATAP--TVGNAILDAYSKCGNIEYANKMFQNLSE 516

Query: 236 ----------------------------GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
                                       GM+  D+ +WN ++  +A N   E+A +L  +
Sbjct: 517 KRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLK 576

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           +Q  + ++PD+ T+++LI +C     +   R  HGY IR     DL +  +L+D Y+K  
Sbjct: 577 LQ-TQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCG 634

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAIL 375
            +  A  +F +     DLV + +MI G             F  ML +  +       +IL
Sbjct: 635 IIGYAYKIFQSSVD-KDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSIL 693

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+    +  G  I     K+     TI   A ++ +    G +  A+S + +I   ++
Sbjct: 694 SACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEAN 753

Query: 435 TSCWNIVIVAC 445
            + W  ++ AC
Sbjct: 754 ANIWGTLLGAC 764



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 13/270 (4%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L T  SL++ Y  +     +  +F      D+ TWN M+    EN C    L  F ++ 
Sbjct: 519 NLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQ 578

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +G++ D  T++ ++   TQM  +   R  H   I++    D  L    ++ YAKCG + 
Sbjct: 579 TQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKGTLLDAYAKCGIIG 637

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F      D V +  ++ G   +   EK L  F  M   G + D+V  +S ++A +
Sbjct: 638 YAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACS 697

Query: 186 CLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             G ++ G K+  ++    G +  P +     ++ + ++ G +  A    +    K  + 
Sbjct: 698 HAGRIAEGLKIFDSIEKIHGMK--PTIEQFACVVDLLARGGHVSEA----YSFVTKIPIE 751

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            NA I G  L      A    HE++L R V
Sbjct: 752 ANANIWGTLLG-----ACKTYHEVELGRIV 776


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/748 (30%), Positives = 384/748 (51%), Gaps = 46/748 (6%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS---SLCNVFVNMYAKCGDLNSSEC 129
           +  LL ++        L  G  +H  ++ +G +++    +L    + MY        +  
Sbjct: 32  ADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVA 91

Query: 130 TFSGMHCA---DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAA 183
            FS +  A    ++ WN ++ G     +    +L++ +M W+   A   D  +L   V +
Sbjct: 92  VFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKM-WTHPAAPSPDAHTLPYVVKS 150

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A LG +S G+++H      G     YV   ++LI MYS  G +  A  AF GM  +D V
Sbjct: 151 CAALGAVSLGRLVHRTARATGLASDVYVG--SALIKMYSDAGLLRDARDAFDGMPWRDCV 208

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WN ++DG+   G    A  L   M++    EP+ AT+   +S+CA    L  G  +H  
Sbjct: 209 LWNVMMDGYIKAGDVGGAVRLFRNMRV-SGCEPNFATLACFLSVCAAEADLLSGVQLHSL 267

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A++  L  ++ + N+L+  Y+K   L  A  LF  + P +DLV+WN MISG         
Sbjct: 268 AVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELL-PRDDLVTWNGMISGCVQNGLLDE 326

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF +ML   ++    TL+++LP+      L+ GK +H + ++     +   V+AL+ 
Sbjct: 327 ALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVD 386

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  C D+  A +L    +   D    + VI     NG  ++A++ F+ + +Q    P++
Sbjct: 387 IYFKCRDVRTARNLYD-AARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ-CIKPNA 444

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT+ +V+ AC ++     G+ +HG  L++       V++AL+ MY +C  +  +  +F  
Sbjct: 445 VTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSK 504

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHG 588
               +  TWN MIS+FSQN     AL+LFR +  E    N ++I S LSAC  L  + +G
Sbjct: 505 MSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYG 564

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K+IHG +     + + F  SAL+DMY+ C               K+  +W+S+ISAYG H
Sbjct: 565 KEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAH 624

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   E++   H M   G +P   + ++L+SAC+H+GLV+EGLQ +  M +EY + P  EH
Sbjct: 625 GLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEH 684

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
             C+VD+  RSG+L +A +FI ++P +P  G+WGA+L AC  H + ++    ++ LFKL+
Sbjct: 685 FACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLD 744

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P N GYY+ +SN+    GRW    ++ +
Sbjct: 745 PGNSGYYVLMSNINAVAGRWDGVSKVRR 772



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 189/680 (27%), Positives = 327/680 (48%), Gaps = 44/680 (6%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALF---YETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           HL   T LL  Y     F  ++A+F           + WN +I          + + F+ 
Sbjct: 69  HLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYV 128

Query: 63  EMV--EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +M         D+ TL  +V +   +  +  GR+VH  +   G+ +D  + +  + MY+ 
Sbjct: 129 KMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSD 188

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F GM   D V WN +M G +        +  FR M  SG + +  +L+  
Sbjct: 189 AGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACF 248

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A   +L  G  +H+L +K G E    V+V N+L+SMY++C  ++ A R F  +   
Sbjct: 249 LSVCAAEADLLSGVQLHSLAVKCGLEQE--VAVANTLLSMYAKCRCLDDAWRLFELLPRD 306

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+WN +I G   NG  +EA  L  +M L     PD  T+V+L+    D   L++G+ V
Sbjct: 307 DLVTWNGMISGCVQNGLLDEALGLFCDM-LRSGARPDSVTLVSLLPALTDLNGLKQGKEV 365

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HGY IR  +  D  ++++L+D Y K   +  A  L++A A   D+V  +++ISG      
Sbjct: 366 HGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDA-ARAIDVVIGSTVISGYVLNGM 424

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F+ +L  C + +  T+ ++LP+C S  +L  G+ IH + L+  +       +A
Sbjct: 425 SEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESA 484

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           LM MY  CG L  +  +  ++S   D   WN +I + +QNG  QEA+  F+ M   +   
Sbjct: 485 LMDMYAKCGRLDLSHYIFSKMSLK-DEVTWNSMISSFSQNGEPQEALDLFRQMC-MEGIK 542

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            ++VT+ + +SAC +L   + GK +HG+ +K  +  D   ++ALI MY +C +++ A  V
Sbjct: 543 YNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRV 602

Query: 529 FESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
           FE   + N  +WN +ISA+  +   K  V  L   +   ++P+ ++ ++++SAC   G++
Sbjct: 603 FEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLV 662

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G Q+        FQ        +   Y        ++ M+  Y   G+  +AI+   +
Sbjct: 663 EEGLQL--------FQ-------CMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIAD 707

Query: 646 MCNSGIRPTKSSVISLLSAC 665
           M     +P      +LL AC
Sbjct: 708 M---PFKPDAGIWGALLHAC 724



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 278/579 (48%), Gaps = 26/579 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   ++L+  YS+      +   F     +D V WN M+   ++   V   +  F
Sbjct: 171 GLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLF 230

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G   +  TL   +S       L  G  +H L++K G+  + ++ N  ++MYAKC
Sbjct: 231 RNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKC 290

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L+ +   F  +   D V+WN ++SGC+ N   ++ L  F +M  SG + D+V+L S +
Sbjct: 291 RCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLL 350

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L  L  GK +H   I+       +  + ++L+ +Y +C D+  A   +      D
Sbjct: 351 PALTDLNGLKQGKEVHGYIIRNCVHMDAF--LVSALVDIYFKCRDVRTARNLYDAARAID 408

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV  + +I G+ LNG  E+A  +   + L + ++P+  TV +++  CA    L  G+ +H
Sbjct: 409 VVIGSTVISGYVLNGMSEKALQMFRYL-LEQCIKPNAVTVASVLPACASISALPLGQEIH 467

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           GY +R        + ++LMD Y+K   L  +  +F+ ++ + D V+WNSMIS        
Sbjct: 468 GYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMS-LKDEVTWNSMISSFSQNGEP 526

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M     +++  T+ + L +C S  ++ +GK IH   +K     +    +AL
Sbjct: 527 QEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESAL 586

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++  A  + + +   ++ S WN +I A   +G  +E++ +F    Q++   P
Sbjct: 587 IDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISAYGAHGLVKESV-SFLHRMQEEGYKP 644

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRC-RDIKSAS 526
           D VT + +ISAC +  L  EG  L     K  + +  R+++   ++ +Y R  R  K+  
Sbjct: 645 DHVTFLALISACAHAGLVEEGLQLFQCMTKEYL-IAPRMEHFACMVDLYSRSGRLDKAIQ 703

Query: 527 TVFESCYNCNLCTWNCMISAFSQNK----AEVRALELFR 561
            + +  +  +   W  ++ A   ++    A++ + ELF+
Sbjct: 704 FIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 26/342 (7%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSN-NTIGVNA-LMHMYI---NCGDLV 420
           S   LLA+L  C S   L  G  IH   +  G  SN N + ++  L+ MY+      D V
Sbjct: 31  SADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAV 90

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVIS 479
           A FS L R +  S    WN +I   T  GH   A+  +  M T     SPD+ TL  V+ 
Sbjct: 91  AVFSALPRAAAGSSLP-WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVK 149

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           +C  L     G+ +H  A  + +  D  V +ALI MY     ++ A   F+     +   
Sbjct: 150 SCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVL 209

Query: 540 WNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN M+  + +      A+ LFR++     EPN  ++   LS C     L  G Q+H    
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269

Query: 597 HLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIE 641
             G ++   +++ LL MY+ C+                   W+ MIS    +G   EA+ 
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALG 329

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           LF +M  SG RP   +++SLL A +    + +G + +  ++ 
Sbjct: 330 LFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIR 371


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 336/616 (54%), Gaps = 42/616 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +  LG++LG          N+L+SM+ + GD+  A   F  M  +D+ SWN ++ G+A
Sbjct: 122 KTVTRLGVRLG----------NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G F+EA +L H M L   + PD+ T   ++  C     L  GR VH + IR     D+
Sbjct: 172 KAGYFDEALNLYHRM-LWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDV 230

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ 365
            ++N+L+  Y K   +  A L+F+ + P  D +SWN+MISG F+         + ++  +
Sbjct: 231 DVVNALITMYVKCGDIFSARLVFDRM-PRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289

Query: 366 F----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           F       T+ +++ +C +      G+ +H + +K GF       N+L+ M+ + G    
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  ++    D   W  +I    +NG  ++A++T+  M + +   PD +T+ +V+SAC
Sbjct: 350 AEMVFSKMEFK-DLVSWTAMISGYEKNGLPEKAVETYTIM-EHEGVVPDEITIASVLSAC 407

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             L L  +G  LH  A ++ +     V N+LI MY +CR I  A  VF    N N+ +W 
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWT 467

Query: 542 CMISAFSQNKAEVRALELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
            +I     N     AL  F+   L  +PN +++VS+LSAC ++G L  GK+IH H    G
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527

Query: 600 FQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
              + F+ +ALLDMY  C              K  A+W+ +++ Y   GKG  A+ELFH+
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHK 587

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  S + P + +  SLL ACS SG+V +GL+Y+ +M  ++ + P  +H+  +VD+LGR+G
Sbjct: 588 MIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           +L++AYEFIK +PI P P +WGA+L+AC  + + ++G+  A+ +F+++ ++VGYYI L N
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCN 707

Query: 766 MYVALGRWKDAVEIGK 781
           +Y   G+W +   + K
Sbjct: 708 LYADSGKWDEVARVRK 723



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 311/664 (46%), Gaps = 49/664 (7%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E  +  +  T + ++          +G  VH    K        L N  ++M+ + GD
Sbjct: 85  MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L  +   F  M   D  SWN ++ G     Y ++ L  +  M W G + D  +    +  
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              L +L+ G+ +H   I+ G+E    V V N+LI+MY +CGDI +A   F  M  +D +
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESD--VDVVNALITMYVKCGDIFSARLVFDRMPRRDRI 262

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA+I G+  N    E   L   M+    V+PD+ T+ ++IS C      R GR VHGY
Sbjct: 263 SWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDLMTMTSVISACEALGDERLGREVHGY 321

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
            I+     ++ + NSL+  +S      +AE++F+ +    DLVSW +MISG  K  L   
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME-FKDLVSWTAMISGYEKNGLPEK 380

Query: 364 SQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           +  +++            T+ ++L +C     L+ G  +H +  + G ++  I  N+L+ 
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  +  A  +  RI  N +   W  +I+    N    EA+  F+ M    +  P+S
Sbjct: 441 MYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMI--LSLKPNS 497

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VTLV+V+SAC  +     GK +H  AL++ +G D  + NAL+ MY RC  ++ A   F S
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
           C   ++ +WN +++ ++Q      A+ELF  +   +  P+EI+  S+L AC++ G++  G
Sbjct: 558 CEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616

Query: 589 KQIH---GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
            +      H FH+                 N K    ++S++   G  G+  +A E   +
Sbjct: 617 LEYFESMEHKFHIA---------------PNLKH---YASVVDLLGRAGRLEDAYEFIKK 658

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M    I P  +   +LL+AC     V+ G +     + E D +    +++ + ++   SG
Sbjct: 659 M---PIDPDPAIWGALLNACRIYQNVELG-ELAAQHIFEMDTK-SVGYYILLCNLYADSG 713

Query: 706 KLQE 709
           K  E
Sbjct: 714 KWDE 717



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 243/490 (49%), Gaps = 18/490 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ +        +  +F +   +D+ +WN ++    +       L+ +  M+  GIR 
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T   ++     +  L +GR VH   I+ G  +D  + N  + MY KCGD+ S+   F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N+   + L  F  M       D ++++S ++A   LG+  
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   IK G+     VSV NSLI M+S  G  + AE  F  M  KD+VSW A+I G
Sbjct: 314 LGREVHGYVIKTGFVAE--VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG  E+A +    M+    V PD  T+ +++S CA   LL +G  +H +A R  L  
Sbjct: 372 YEKNGLPEKAVETYTIME-HEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
            +++ NSL+D YSK   + KA  +F+ I P  +++SW S+I GL       E L+   Q 
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRSFEALFFFQQM 489

Query: 367 SFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
             S      TL+++L +C    +L  GK IH   L+ G   +    NAL+ MY+ CG + 
Sbjct: 490 ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A++  Q  S   D + WNI++    Q G    A++ F  M  + + +PD +T  +++ A
Sbjct: 550 PAWN--QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMI-ESDVNPDEITFTSLLCA 606

Query: 481 CGNLELAFEG 490
           C    +  +G
Sbjct: 607 CSRSGMVTDG 616



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 25/460 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T Y       S+  +F     +D ++WNAMI+   EN   + GL  F
Sbjct: 225 GFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M E  +  D  T+  ++SA   +   + GR VH   IK G +A+ S+ N  + M++  
Sbjct: 285 FMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  + +E  FS M   D VSW  ++SG   N  PEK +  +  M   G   D ++++S +
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG L  G ++H    + G   + YV V NSLI MYS+C  I+ A   F  +  K+
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGL--TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKN 462

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW +II G  LN +  EA     +M L  S++P+  T+V+++S CA    L  G+ +H
Sbjct: 463 VISWTSIILGLRLNYRSFEALFFFQQMIL--SLKPNSVTLVSVLSACARIGALSCGKEIH 520

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+R  LG+D  + N+L+D Y +   +  A   FN+     D+ SWN +++G       
Sbjct: 521 AHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE--KDVASWNILLTGYAQQGKG 578

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF +M+         T  ++L +C+      + LE+ +S+   + K   + N   
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESM---EHKFHIAPNLKH 635

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             +++ +    G L  A+  ++++  + D + W  ++ AC
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNAC 675


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 239/773 (30%), Positives = 407/773 (52%), Gaps = 38/773 (4%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN++I    + +     L  + +M   GI  DS T+ +++ A  ++N +  G  +H    
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
              +I D  +    V+ Y KCG +  +   F  M   D VSWN ++SG +     ++ +L
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            F EM  +G   ++ ++ + + A   + EL  G+ IH   ++ G  D     V  +L+  
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMD-AYVGTALVGF 206

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y +  D   + R F  M  +++VSWNAII GF   G   +A  L   M L+  ++ D  T
Sbjct: 207 YMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSM-LIEGIKFDAVT 264

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           ++ +I  CA+   LR G  +H  AI+  L  DL ++N+L++ YS + SL  +  LFNA+ 
Sbjct: 265 MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAV- 323

Query: 341 PMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFG 387
           P +D   WNSMIS             LF +M     +    T+  +L  CN   +   +G
Sbjct: 324 PTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWG 383

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           + +H   +K G   +    NAL+ MY+    + AA  + +++    D   WN +I A  Q
Sbjct: 384 RGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM-RGLDVISWNTMISAFAQ 442

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +    +A + F  M + +    +S T+V++++ C +      G+S+HG A+K+ + ++T 
Sbjct: 443 SMFRAKAFELFLMMCESE-IKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTS 501

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--EF 565
           +  +L  MY  C D ++A+ +F  C   +L +WN +IS++ +N    +AL LF H+  E 
Sbjct: 502 LNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISEL 561

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFH--LGFQENSFISSALLDMYSNC------ 617
           EPN ++I++IL++CTQL  L  G+ +H +     +  + ++ +++A + MY+ C      
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    +S  +W++MI+ YG HG+G +A   F +M + G +P   S  S+LSACSHS
Sbjct: 622 EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHS 681

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GL   GLQ +++M+ ++ + P+  H+ C+VD+LGR G   EA  FI ++PI+P   +W A
Sbjct: 682 GLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRA 741

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +LS+C    + K+ + +   L +LEP N G +I LSN+Y A G W + V+I K
Sbjct: 742 LLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 192/677 (28%), Positives = 326/677 (48%), Gaps = 51/677 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y        +  +F E   +D+V+WNA+I+  V   C    +  F EM + G+ 
Sbjct: 99  TALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLT 158

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSEC 129
            +S T++ ++ A  +M  L+ G+ +H   ++ G+   D+ +    V  Y +  D   S  
Sbjct: 159 PNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHR 217

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            FS M   + VSWN I++G L+     K L  +  M   G + D V++   + A A  G 
Sbjct: 218 VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGC 277

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  +H L IK    +  +  + N+L++MYS  G +E++   F  +   D   WN++I
Sbjct: 278 LRLGMQLHQLAIKFNLINDLF--ILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMI 335

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE----GRSVHGYAI 305
             +   G   EA  L  +M+L R ++ D+ T+  ++SLC D   L +    GR +H +A+
Sbjct: 336 SSYIGFGFHAEAIALFIKMRLER-IKEDVRTIAIMLSLCND---LNDGSIWGRGLHAHAM 391

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------F 356
           +  +  D  + N+L+  Y K N ++ A+ +F  +  + D++SWN+MIS           F
Sbjct: 392 KSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGL-DVISWNTMISAFAQSMFRAKAF 450

Query: 357 KEMLYLCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           +  L +C    +F+  T++++L  C     L FG+SIH + +K G   NT    +L  MY
Sbjct: 451 ELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMY 510

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
           INCGD  AA ++  R     D   WN +I +  +N +  +A+  F  M  +    P+SVT
Sbjct: 511 INCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMISE--LEPNSVT 567

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYGRCRDIKSASTVFES 531
           ++N++++C  L     G+ LH    +  + L  D  + NA ITMY RC  ++ A  +F +
Sbjct: 568 IINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCT 627

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               ++ +WN MI+ +  +     A   F  +    F+PN +S  S+LSAC+  G+   G
Sbjct: 628 LQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTG 687

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            Q+    FH           +++  +        +  M+   G  G   EAI   + M  
Sbjct: 688 LQL----FH-----------SMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSM-- 730

Query: 649 SGIRPTKSSVISLLSAC 665
             I P  S   +LLS+C
Sbjct: 731 -PIEPDASIWRALLSSC 746



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 39/281 (13%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +TSL   Y N     ++  +F     +D+V+WN++I++ ++N      L  F  M+ E +
Sbjct: 503 NTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-L 561

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK--AGMIADSSLCNVFVNMYAKCGDLNSS 127
             +S T++ I+++ TQ+  L  G+ +H  + +    +  D+SL N F+ MYA+CG L  +
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  +     VSWN +++G   +       L F +M   G + +NVS +S ++A +  
Sbjct: 622 EKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHS 681

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G       +   G++L                 +S   D   A +         +  +  
Sbjct: 682 G-------LTVTGLQL----------------FHSMVRDFGIAPQ---------LTHYGC 709

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           ++D     G F EA   ++ M     +EPD +    L+S C
Sbjct: 710 MVDLLGRGGHFSEAIAFINSM----PIEPDASIWRALLSSC 746


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 336/616 (54%), Gaps = 42/616 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +  LG++LG          N+L+SM+ + GD+  A   F  M  +D+ SWN ++ G+A
Sbjct: 122 KTVTRLGVRLG----------NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G F+EA +L H M L   + PD+ T   ++  C     L  GR VH + IR     D+
Sbjct: 172 KAGYFDEALNLYHRM-LWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDV 230

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ 365
            ++N+L+  Y K   +  A L+F+ + P  D +SWN+MISG F+         + ++  +
Sbjct: 231 DVVNALITMYVKCGDIFSARLVFDRM-PRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289

Query: 366 F----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           F       T+ +++ +C +      G+ +H + +K GF       N+L+ M+ + G    
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  ++    D   W  +I    +NG  ++A++T+  M + +   PD +T+ +V+SAC
Sbjct: 350 AEMVFSKMEFK-DLVSWTAMISGYEKNGLPEKAVETYTIM-EHEGVVPDEITIASVLSAC 407

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             L L  +G  LH  A ++ +     V N+LI MY +CR I  A  VF    N N+ +W 
Sbjct: 408 AGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWT 467

Query: 542 CMISAFSQNKAEVRALELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
            +I     N     AL  F+   L  +PN +++VS+LSAC ++G L  GK+IH H    G
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527

Query: 600 FQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
              + F+ +ALLDMY  C              K  A+W+ +++ Y   GKG  A+ELFH+
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHK 587

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  S + P + +  SLL ACS SG+V +GL+Y+ +M  ++ + P  +H+  +VD+LGR+G
Sbjct: 588 MIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAG 647

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           +L++AYEFIK +PI P P +WGA+L+AC  + + ++G+  A+ +F+++ ++VGYYI L N
Sbjct: 648 RLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCN 707

Query: 766 MYVALGRWKDAVEIGK 781
           +Y   G+W +   + K
Sbjct: 708 LYADSGKWDEVARVRK 723



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 185/670 (27%), Positives = 312/670 (46%), Gaps = 49/670 (7%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E  +  +  T + ++          +G  VH    K        L N  ++M+ + GD
Sbjct: 85  MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L  +   F  M   D  SWN ++ G     Y ++ L  +  M W G + D  +    +  
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRT 204

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              L +L+ G+ +H   I+ G+E    V V N+LI+MY +CGDI +A   F  M  +D +
Sbjct: 205 CGGLPDLARGREVHLHVIRYGFESD--VDVVNALITMYVKCGDIFSARLVFDRMPRRDRI 262

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA+I G+  N    E   L   M+    V+PD+ T+ ++IS C      R GR VHGY
Sbjct: 263 SWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDLMTMTSVISACEALGDERLGREVHGY 321

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
            I+     ++ + NSL+  +S      +AE++F+ +    DLVSW +MISG  K  L   
Sbjct: 322 VIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME-FKDLVSWTAMISGYEKNGLPEK 380

Query: 364 SQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           +  +++            T+ ++L +C     L+ G  +H +  + G ++  I  N+L+ 
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  +  A  +  RI  N +   W  +I+    N    EA+  F+ M    +  P+S
Sbjct: 441 MYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNYRSFEALFFFQQMI--LSLKPNS 497

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VTLV+V+SAC  +     GK +H  AL++ +G D  + NAL+ MY RC  ++ A   F S
Sbjct: 498 VTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS 557

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
           C   ++ +WN +++ ++Q      A+ELF  +   +  P+EI+  S+L AC++ G++  G
Sbjct: 558 CEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDG 616

Query: 589 KQIH---GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
            +      H FH+                 N K    ++S++   G  G+  +A E   +
Sbjct: 617 LEYFESMEHKFHIA---------------PNLKH---YASVVDLLGRAGRLEDAYEFIKK 658

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M    I P  +   +LL+AC     V+ G +     + E D +    +++ + ++   SG
Sbjct: 659 M---PIDPDPAIWGALLNACRIYQNVELG-ELAAQHIFEMDTK-SVGYYILLCNLYADSG 713

Query: 706 KLQEAYEFIK 715
           K  E     K
Sbjct: 714 KWDEVARVRK 723



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 243/490 (49%), Gaps = 18/490 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ +        +  +F +   +D+ +WN ++    +       L+ +  M+  GIR 
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T   ++     +  L +GR VH   I+ G  +D  + N  + MY KCGD+ S+   F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N+   + L  F  M       D ++++S ++A   LG+  
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   IK G+     VSV NSLI M+S  G  + AE  F  M  KD+VSW A+I G
Sbjct: 314 LGREVHGYVIKTGF--VAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG  E+A +    M+    V PD  T+ +++S CA   LL +G  +H +A R  L  
Sbjct: 372 YEKNGLPEKAVETYTIME-HEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
            +++ NSL+D YSK   + KA  +F+ I P  +++SW S+I GL       E L+   Q 
Sbjct: 431 YVIVANSLIDMYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRSFEALFFFQQM 489

Query: 367 SFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
             S      TL+++L +C    +L  GK IH   L+ G   +    NAL+ MY+ CG + 
Sbjct: 490 ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRME 549

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A++  Q  S   D + WNI++    Q G    A++ F  M  + + +PD +T  +++ A
Sbjct: 550 PAWN--QFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMI-ESDVNPDEITFTSLLCA 606

Query: 481 CGNLELAFEG 490
           C    +  +G
Sbjct: 607 CSRSGMVTDG 616



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 228/460 (49%), Gaps = 25/460 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T Y       S+  +F     +D ++WNAMI+   EN   + GL  F
Sbjct: 225 GFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M E  +  D  T+  ++SA   +   + GR VH   IK G +A+ S+ N  + M++  
Sbjct: 285 FMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  + +E  FS M   D VSW  ++SG   N  PEK +  +  M   G   D ++++S +
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG L  G ++H    + G   + YV V NSLI MYS+C  I+ A   F  +  K+
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGL--TSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKN 462

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW +II G  LN +  EA     +M L  S++P+  T+V+++S CA    L  G+ +H
Sbjct: 463 VISWTSIILGLRLNYRSFEALFFFQQMIL--SLKPNSVTLVSVLSACARIGALSCGKEIH 520

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+R  LG+D  + N+L+D Y +   +  A   FN+     D+ SWN +++G       
Sbjct: 521 AHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE--KDVASWNILLTGYAQQGKG 578

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF +M+         T  ++L +C+      + LE+ +S+   + K   + N   
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESM---EHKFHIAPNLKH 635

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             +++ +    G L  A+  ++++  + D + W  ++ AC
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNAC 675


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/730 (31%), Positives = 386/730 (52%), Gaps = 44/730 (6%)

Query: 89  LKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           ++ GR +H L S  A +  D  LC   + MY+ CG  + S   F  +   +   WN ++S
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156

Query: 148 GCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
               N      L  F +M   SG   DN +    V A A + E+  G  +H L +K    
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
           +  +VS  N+L+S Y   G +  A R F  M  +++VSWN++I  F+ NG  EE F LL 
Sbjct: 217 EDVFVS--NALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLG 274

Query: 267 EMQLMR---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +M       +  PD+AT+ T++ +CA    +  G+ VHG A++  L  ++++ N+LMD Y
Sbjct: 275 QMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMY 334

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS-- 369
           SK   ++ A+++F  +    ++VSWN+M+ G            L ++ML           
Sbjct: 335 SKCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           T+L  +P C     L   K +HC+ LK  F  NN +  NA +  Y  CG L  A  +   
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCS 453

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           I   +  S WN +I   +Q+   + ++  +  M +     PD  T+ +++SAC  ++   
Sbjct: 454 IRSKTVNS-WNALIGGYSQSSDPRLSLDAYFQM-KSSGLLPDLFTVCSLLSACSQIKSLK 511

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            GK +HGL +++ +  D+ V  +L+++Y  C ++ +A  +F++  +  L +WN M++ + 
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYL 571

Query: 549 QNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           QN    RAL LFR +     +P EIS++S+  AC+ L  LR G++ HG+      ++N+F
Sbjct: 572 QNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAF 631

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           I+ +++DMY+                 +S A+W++M+  YG HG+  EAI+LF EM  +G
Sbjct: 632 IACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTG 691

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
             P + + + +L+AC+HSGLV EGL Y + M   + + P  +H+ C++DML R+GKL EA
Sbjct: 692 HCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEA 751

Query: 711 YEF-IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
            +   + +  +P  G+W  +LS+C  H + +MG+++A  LF  EPE    Y+ LSN+Y  
Sbjct: 752 LKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAG 811

Query: 770 LGRWKDAVEI 779
            G+W +  ++
Sbjct: 812 SGKWDEVRKV 821



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/603 (26%), Positives = 293/603 (48%), Gaps = 33/603 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV-EEGI 69
           T ++T YS     + S ++F     K++  WNA+I++   N      L  F +M+ E G+
Sbjct: 121 TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D+ T   +V A   ++ ++ G  VH L +K  ++ D  + N  V+ Y   G ++ +  
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL-- 187
            F  M   + VSWN+++     N   E+C L   +M    E+ D ++ +  VA  A +  
Sbjct: 241 VFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQM---MEKDDEIAFTPDVATLATVLP 297

Query: 188 -----GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                 E+  GK +H L +KL  +    V V N+L+ MYS+CG I  A+  F     K+V
Sbjct: 298 VCARDREIGVGKGVHGLAMKLSLDKE--VVVNNALMDMYSKCGCINDAQVIFKLNNNKNV 355

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VSWN ++ GF+  G   + FDLL +M      +  D  T++  + +C +  +L   + +H
Sbjct: 356 VSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELH 415

Query: 302 GYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
            Y++++  +  + L+ N+ +  Y+K  SLS A  +F +I     + SWN++I G  +   
Sbjct: 416 CYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS-KTVNSWNALIGGYSQSSD 474

Query: 358 EMLYLCSQFSFS---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             L L + F            T+ ++L +C+  +SL+ GK +H   ++     ++    +
Sbjct: 475 PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYIS 534

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +YI+CG+L  A  L   +   +  S WN ++    QNG  + A+  F+ M       
Sbjct: 535 LLSLYIHCGELSTAHVLFDAMEDKTLVS-WNTMVNGYLQNGFPERALSLFRQMV-LYGVQ 592

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P  +++++V  AC  L     G+  HG ALK L+  +  +  ++I MY +   +  +  V
Sbjct: 593 PCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKV 652

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      ++ +WN M+  +  +     A++LF  ++     P+E++ + +L+AC   G++
Sbjct: 653 FNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLV 712

Query: 586 RHG 588
             G
Sbjct: 713 HEG 715



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 176/683 (25%), Positives = 319/683 (46%), Gaps = 42/683 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S +L++ Y        +L +F     +++V+WN+MI    +N          G+M+E+ 
Sbjct: 221 VSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKD 280

Query: 69  --IRF--DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             I F  D  TL  ++    +   +  G+ VH L++K  +  +  + N  ++MY+KCG +
Sbjct: 281 DEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCI 340

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVSLSSAVA 182
           N ++  F   +  + VSWNT++ G        K     R+M  G    +AD V++ +AV 
Sbjct: 341 NDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVP 400

Query: 183 ASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              C  E  L   K +H   +K  +  +  + V N+ ++ Y++CG +  A R F  +  K
Sbjct: 401 --VCFEESVLPNLKELHCYSLKQEFVHNNEL-VANAFVASYAKCGSLSYAHRVFCSIRSK 457

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            V SWNA+I G++ +     + D   +M+    + PD+ TV +L+S C+    L+ G+ V
Sbjct: 458 TVNSWNALIGGYSQSSDPRLSLDAYFQMK-SSGLLPDLFTVCSLLSACSQIKSLKLGKEV 516

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG  IR  L  D  +  SL+  Y     LS A +LF+A+     LVSWN+M++G      
Sbjct: 517 HGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMED-KTLVSWNTMVNGYLQNGF 575

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF++M+    Q    +++++  +C+   SL  G+  H + LK    +N     +
Sbjct: 576 PERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACS 635

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ MY   G ++ +F +   +   S  S WN +++    +G  +EAIK F+ M Q+    
Sbjct: 636 VIDMYAKNGSVMESFKVFNGLKERSVAS-WNAMVMGYGIHGRAKEAIKLFEEM-QRTGHC 693

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           PD +T + V++AC +  L  EG +     +K+L G++  +++   +I M  R   +  A 
Sbjct: 694 PDELTFLGVLTACNHSGLVHEGLTYLD-QMKTLFGMNPTLKHYACVIDMLVRAGKLDEAL 752

Query: 527 TVF--ESCYNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEISIVSILSACT 580
            +   E      +  WN ++S+   +K     E  A +LF     +P    ++S L A +
Sbjct: 753 KIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGS 812

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
             G     +++   +  +  ++++  S   +++     S  A  S +  +      W  +
Sbjct: 813 --GKWDEVRKVRQRMKEMSLRKDAGCS--WIELNGKVFSFVAGESSLDGFEEIKSLWSVL 868

Query: 641 ELFHEMCNSGIRPTKSSVISLLS 663
           E   E+   G RP  SSV   LS
Sbjct: 869 E--REIGKMGYRPDTSSVQHDLS 889


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/726 (29%), Positives = 378/726 (52%), Gaps = 42/726 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G  +H    K+G+  D S+ N  +N+Y+KC +   +          D VSW+ ++SG
Sbjct: 72  LRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISG 131

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N      L+ F EM   G + +  + SS + A + + +L  GK +H + +  G+E  
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD 191

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V+  N+L+ MY++C +   ++R F  +  ++VVSWNA+   +       EA  L +EM
Sbjct: 192 VFVA--NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEM 249

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            ++  ++P+  ++ ++++ C        G+ +HGY I+    +D    N+L+D Y+K   
Sbjct: 250 -VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILP 376
           L+ A  +F  I    D+VSWN++I+G       ++ L L  Q   S       TL + L 
Sbjct: 309 LADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALK 367

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNS 433
           +C      E G+ +H   +K+   ++      L+ MY  C    D   AF+LL       
Sbjct: 368 ACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE----K 423

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN +I   +Q     EA+  F  M  ++    +  TL  ++ +   L++    + +
Sbjct: 424 DLIAWNAIISGYSQYWEDMEALSLFVEM-HKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HGL++KS    D  V N+LI  YG+C  ++ A  +FE C   +L ++  MI+A++Q    
Sbjct: 483 HGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQG 542

Query: 554 VRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL+LF   + +E +P+     S+L+AC  L     GKQ+H H+   GF  + F  ++L
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 602

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           ++MY+ C               +   +WS+MI     HG G +A++LF++M   G+ P  
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNH 662

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +++S+L AC+H+GLV E   Y+ +M E +  +P  EH+ C++D+LGR+GK+ EA E + 
Sbjct: 663 ITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVN 722

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P +    VWGA+L A   H D ++G++ AE+LF LEPE  G ++ L+N+Y + G+W++
Sbjct: 723 KMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWEN 782

Query: 776 AVEIGK 781
             E+ +
Sbjct: 783 VAEVRR 788



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 211/732 (28%), Positives = 350/732 (47%), Gaps = 46/732 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS    F  +  L  E+   D+V+W+A+I+   +N      L  F EM   G++ +
Sbjct: 97  LINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   ++ A + +  L+ G+ VH + + +G   D  + N  V MYAKC +   S+  F 
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + VSWN + S  +  ++  + +  F EM  SG + +  SLSS V A   L + S 
Sbjct: 217 EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK+IH   IKLGY+  P+ +  N+L+ MY++ GD+  A   F  +   D+VSWNA+I G 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
            L+   E+A +LL +M+    + P+I T+ + +  CA   L   GR +H   ++  +  D
Sbjct: 335 VLHEHHEQALELLGQMK-RSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESD 393

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L +   L+D YSK + L  A + FN + P  DL++WN++ISG            LF EM 
Sbjct: 394 LFVSVGLVDMYSKCDLLEDARMAFN-LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                F+ +TL  IL S    + +   + +H   +K GF ++   VN+L+  Y  C  + 
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + +  +   D   +  +I A  Q G  +EA+K F  M Q     PD     ++++A
Sbjct: 513 DAERIFEECT-IGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDMELKPDRFVCSSLLNA 570

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C NL    +GK LH   LK    LD    N+L+ MY +C  I  A   F       + +W
Sbjct: 571 CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSW 630

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           + MI   +Q+    +AL+LF  +  E   PN I++VS+L AC   G++   K        
Sbjct: 631 SAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK-------- 682

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           L F+       ++ +++        ++ MI   G  GK  EA+EL ++M         S 
Sbjct: 683 LYFE-------SMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM---PFEANASV 732

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGK---LQEAYEF 713
             +LL A      V+ G +    +   + + PE    HV + ++   +GK   + E    
Sbjct: 733 WGALLGAARIHKDVELGRRAAEML---FILEPEKSGTHVLLANIYASAGKWENVAEVRRL 789

Query: 714 IKNLPIQPKPGV 725
           +++  ++ +PG+
Sbjct: 790 MRDSKVKKEPGM 801



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 174/583 (29%), Positives = 291/583 (49%), Gaps = 25/583 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + +L+  Y+    F  S  LF E   ++VV+WNA+ +  V+       +  F
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLF 246

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EMV  GI+ +  +L  +V+A T +    +G+++H   IK G   D    N  V+MYAK 
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  +   D VSWN +++GC+ + + E+ L    +M  SG   +  +LSSA+
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSAL 366

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +G    G+ +H+  +K+  E   +VSV   L+ MYS+C  +E A  AF  +  KD
Sbjct: 367 KACAGMGLKELGRQLHSSLMKMDMESDLFVSV--GLVDMYSKCDLLEDARMAFNLLPEKD 424

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++WNAII G++   +  EA  L  EM     +  +  T+ T++   A   ++   R VH
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMH-KEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 483

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G +++     D+ ++NSL+D Y K + +  AE +F     + DLVS+ SMI+        
Sbjct: 484 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT-IGDLVSFTSMITAYAQYGQG 542

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM  +  +       ++L +C +  + E GK +H   LK GF  +    N+L
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 602

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY  CG +  A      ++     S W+ +I    Q+GH ++A++ F  M  ++  SP
Sbjct: 603 VNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQHGHGRQALQLFNQML-KEGVSP 660

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-S 526
           + +TLV+V+ AC +  L  E K L+  +++ L G     ++   +I + GR   I  A  
Sbjct: 661 NHITLVSVLGACNHAGLVTEAK-LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 719

Query: 527 TVFESCYNCNLCTWNCMISAFSQNK-AEV--RALELFRHLEFE 566
            V +  +  N   W  ++ A   +K  E+  RA E+   LE E
Sbjct: 720 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 762



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/573 (25%), Positives = 252/573 (43%), Gaps = 83/573 (14%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   +   L+S C  +  LR G  +H +  +  L  D  + N L++ YSK  +   A  L
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113

Query: 336 FNAIAPMNDLVSWNSMISGL------------FKEMLYL---CSQFSFSTLLAILPSCNS 380
            +  +   DLVSW+++ISG             F EM  L   C++F+FS+   +L +C+ 
Sbjct: 114 VDE-SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS---VLKACSI 169

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            + L  GK +H   +  GF  +    N L+ MY  C + + +  L   I   +  S WN 
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS-WNA 228

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +     Q     EA+  F  M       P+  +L ++++AC  L  +  GK +HG  +K 
Sbjct: 229 LFSCYVQIDFCGEAVGLFYEMV-LSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               D    NAL+ MY +  D+  A +VFE     ++ +WN +I+    ++   +ALEL 
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             ++     PN  ++ S L AC  +G+   G+Q+H  +  +  + + F+S  L+DMYS C
Sbjct: 348 GQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKC 407

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K   AW+++IS Y  + +  EA+ LF EM   GI   ++++ ++L
Sbjct: 408 DLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTIL 467

Query: 663 SACS-----------HSGLVDEGLQ----YYNNMLEEYDVRPETEH-------------- 693
            + +           H   V  G        N++++ Y      E               
Sbjct: 468 KSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLV 527

Query: 694 -HVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
               ++    + G+ +EA +    ++++ ++P   V  ++L+AC++    + GKQ+   +
Sbjct: 528 SFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI 587

Query: 750 FKLEPENVGYYI------SLSNMYVALGRWKDA 776
            K      G+ +      SL NMY   G   DA
Sbjct: 588 LKY-----GFVLDIFAGNSLVNMYAKCGSIDDA 615



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 160/319 (50%), Gaps = 29/319 (9%)

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           ++  + N +P SV+   ++S C   +    G  +H    KS +  D  ++N LI +Y +C
Sbjct: 45  NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSIL 576
           R+   A  + +     +L +W+ +IS ++QN     AL  F  +     + NE +  S+L
Sbjct: 105 RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+ +  LR GKQ+HG V   GF+ + F+++ L+ MY+ C               ++  
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD--EGLQYYN 679
           +W+++ S Y       EA+ LF+EM  SGI+P + S+ S+++AC  +GL D   G   + 
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHG 282

Query: 680 NMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
            +++  YD  P + +   +VDM  + G L +A    + +  QP    W A+++ C  H  
Sbjct: 283 YLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH-- 337

Query: 739 TKMGKQVAELLFKLEPENV 757
            +  +Q  ELL +++   +
Sbjct: 338 -EHHEQALELLGQMKRSGI 355



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 15/138 (10%)

Query: 544 ISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +  FSQ+      L L     F P  +S   +LS C     LR G QIH H+   G  ++
Sbjct: 31  VPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90

Query: 604 SFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCN 648
             I + L+++YS C++                 +WS++IS Y  +G G  A+  FHEM  
Sbjct: 91  PSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150

Query: 649 SGIRPTKSSVISLLSACS 666
            G++  + +  S+L ACS
Sbjct: 151 LGVKCNEFTFSSVLKACS 168


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/794 (29%), Positives = 398/794 (50%), Gaps = 52/794 (6%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL-- 83
           +  +F E   + + TWN MI        +      F  MV E +  +  T   ++ A   
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158

Query: 84  --TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
                + ++Q   +H   +  G+   + +CN  +++Y++ G ++ +   F G+   D  S
Sbjct: 159 GSVAFDVVEQ---IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  ++SG   N    + +  F +M   G      + SS ++A   +  L  G+ +H L +
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           KLG+    YV   N+L+S+Y   G++ +AE  F  M+ +D V++N +I+G +  G  E+A
Sbjct: 276 KLGFSSDTYV--CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
            +L   M L   +EPD  T+ +L+  C AD  L R G+ +H Y  +     +  +  +L+
Sbjct: 334 MELFKRMHL-DGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTTKLGFASNNKIEGALL 391

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY---LCSQ 365
           + Y+K   +  A L +     + ++V WN M+              +F++M     + +Q
Sbjct: 392 NLYAKCADIETA-LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 450

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           +++ +   IL +C     LE G+ IH   +K  F  N    + L+ MY   G L  A+ +
Sbjct: 451 YTYPS---ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
           L R +   D   W  +I   TQ     +A+ TF+ M  +   S D V L N +SAC  L+
Sbjct: 508 LIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQ 565

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              EG+ +H  A  S    D   QNAL+T+Y RC  I+ +   FE     +   WN ++S
Sbjct: 566 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 625

Query: 546 AFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            F Q+     AL +F  +  E    N  +  S + A ++   ++ GKQ+H  +   G+  
Sbjct: 626 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 685

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
            + + +AL+ MY+ C               K+  +W+++I+AY  HG G EA++ F +M 
Sbjct: 686 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 745

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
           +S +RP   +++ +LSACSH GLVD+G+ Y+ +M  EY + P+ EH+VC+VDML R+G L
Sbjct: 746 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 805

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
             A EFI+ +PI+P   VW  +LSAC  H + ++G+  A  L +LEPE+   Y+ LSN+Y
Sbjct: 806 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 865

Query: 768 VALGRWKDAVEIGK 781
               +W DA ++ +
Sbjct: 866 AVSKKW-DARDLTR 878



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 182/709 (25%), Positives = 322/709 (45%), Gaps = 52/709 (7%)

Query: 67  EGIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            GIR +  TL  ++    + N  L +GR +H   +K G+ ++  L     + Y   GDL 
Sbjct: 38  RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 97

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M      +WN ++      N   +    F  M  S     N    S V  + 
Sbjct: 98  GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEAC 156

Query: 186 CLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
             G +++  V  IHA  +  G  DS    V N LI +YS+ G ++ A R F G+  KD  
Sbjct: 157 RGGSVAFDVVEQIHARILYQGLRDS--TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 214

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW A+I G + N    EA  L  +M ++  + P      +++S C     L  G  +HG 
Sbjct: 215 SWVAMISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            ++     D  + N+L+  Y    +L  AE +F+ ++   D V++N++I+G         
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEK 332

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LFK M     +   +TL +++ +C++  +L  G+ +H +  KLGF++N     AL++
Sbjct: 333 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 392

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  C D+  A       +   +   WN+++VA       + + + F+ M Q +   P+ 
Sbjct: 393 LYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQ 450

Query: 472 VTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            T  +++  C   G+LEL   G+ +H   +K+   L+  V + LI MY +   + +A  +
Sbjct: 451 YTYPSILKTCIRLGDLEL---GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
                  ++ +W  MI+ ++Q   + +AL  FR +       +E+ + + +SAC  L  L
Sbjct: 508 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 567

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           + G+QIH      GF  +    +AL+ +YS C                 N AW++++S +
Sbjct: 568 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 627

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRP 689
              G   EA+ +F  M   GI     +  S + A S +  + +G Q +  + +  YD   
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--S 685

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHG 737
           ETE    ++ M  + G + +A +  + L +  K  V W A+++A S HG
Sbjct: 686 ETEVCNALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKHG 732



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 161/701 (22%), Positives = 301/701 (42%), Gaps = 75/701 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      +L++ Y ++    S+  +F     +D VT+N +I    +       +  F
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  DS TL  +V A +    L +G+ +H  + K G  +++ +    +N+YAKC
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+ ++   F      + V WN ++      +        FR+M       +  +  S +
Sbjct: 398 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 457

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                LG+L  G+ IH+  IK  ++ + Y  V + LI MY++ G ++ A         KD
Sbjct: 458 KTCIRLGDLELGEQIHSQIIKTNFQLNAY--VCSVLIDMYAKLGKLDTAWDILIRFAGKD 515

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  +I G+      ++A     +M L R +  D   +   +S CA    L+EG+ +H
Sbjct: 516 VVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 574

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
             A       DL   N+L+  YS+   + ++ L F       D ++WN+++SG  +    
Sbjct: 575 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNN 633

Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L +  + +         T  + + + +   +++ GK +H    K G+ + T   NAL
Sbjct: 634 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 693

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A      +S  ++ S WN +I A +++G   EA+ +F  M    N  P
Sbjct: 694 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHGFGSEALDSFDQMI-HSNVRP 751

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VTLV V+SAC ++ L  +G + +  ++ S  GL  + ++                   
Sbjct: 752 NHVTLVGVLSACSHIGLVDKGIA-YFESMNSEYGLSPKPEH------------------- 791

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++   ++     RA E  + +  +P+ +   ++LSAC          
Sbjct: 792 ----------YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC---------- 831

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE-MCN 648
                V H   +   F +  LL++      ++A   ++S      K W+A +L  + M  
Sbjct: 832 -----VVHKNMEIGEFAAHHLLELEP---EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 883

Query: 649 SGIRP--------TKSSVISLLSACSHSGLVDEGLQYYNNM 681
            G++          K+S+ S      +  L DE  +Y+ ++
Sbjct: 884 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 924



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 202/464 (43%), Gaps = 56/464 (12%)

Query: 370 TLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           TL  +L  C  +  SL+ G+ +H   LKLG  +N      L   Y+  GDL  AF +   
Sbjct: 46  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 105

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +    WN +I          E    F  M   +N +P+  T   V+ AC    +AF
Sbjct: 106 MPERT-IFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEACRGGSVAF 163

Query: 489 E-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           +  + +H   L   +   T V N LI +Y R   +  A  VF+     +  +W  MIS  
Sbjct: 164 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 223

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           S+N+ E  A+ LF     L   P   +  S+LSAC ++  L  G+Q+HG V  LGF  ++
Sbjct: 224 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 283

Query: 605 FISSALLDMY-------------SNCKSNAA--WSSMISAYGYHGKGWEAIELFHEMCNS 649
           ++ +AL+ +Y             SN     A  ++++I+     G G +A+ELF  M   
Sbjct: 284 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 343

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYY----------NNMLE---------------- 683
           G+ P  +++ SL+ ACS  G +  G Q +          NN +E                
Sbjct: 344 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 403

Query: 684 -EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHH 736
            +Y +  E E+ V    ML   G    L+ ++   + + I+   P    + ++L  C   
Sbjct: 404 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 463

Query: 737 GDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
           GD ++G+Q+   + K   +   Y  S L +MY  LG+   A +I
Sbjct: 464 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/749 (29%), Positives = 391/749 (52%), Gaps = 40/749 (5%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           ++G + +S+  + ++    ++  L  GR VH   I+   + D    N  +NMY +CG + 
Sbjct: 16  QQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIE 75

Query: 126 SSECTFSGM-HCADTV-SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            +   +  + +   TV SWN ++ G +   Y EK L   R+M   G   D  ++ S +++
Sbjct: 76  EARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSS 135

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
               G L +G+ IH   ++ G      V V N +++MY++CG IE A   F  M  K VV
Sbjct: 136 CKSPGALEWGREIHFQAMQAGLLFD--VKVANCILNMYAKCGSIEEAREVFDKMEKKSVV 193

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW   I G+A  G+ E AF++  +M+    V P+  T +++++  +    L+ G++VH  
Sbjct: 194 SWTITIGGYADCGRSETAFEIFQKME-QEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKE 358
            +      D  +  +L+  Y+K  S      +F  +    DL++WN+MI GL     ++E
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGYWEE 311

Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALM 410
              + +Q           T + +L +C +  +L +GK IH    K GF+++ IGV NAL+
Sbjct: 312 ASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD-IGVQNALI 370

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG +  A  +  ++    D   W  +I    ++G   EA+  ++ M QQ    P+
Sbjct: 371 SMYSRCGSIKDARLVFDKMVRK-DVISWTAMIGGLAKSGFGAEALTVYQEM-QQAGVEPN 428

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            VT  ++++AC +      G+ +H   +++ +  D  V N L+ MY  C  +K A  VF+
Sbjct: 429 RVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFD 488

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  +N MI  ++ +     AL+LF  L+ E   P++++ +++L+AC   G L  
Sbjct: 489 RMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEW 548

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGY 632
            ++IH  V   GF  ++ + +AL+  Y+ C S +               +W+++I     
Sbjct: 549 AREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQ 608

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG+G +A++LF  M   G++P   + +SLLSACSH+GL++EG +Y+ +M +++ + P  E
Sbjct: 609 HGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIE 668

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LGR+G+L EA   IK +P Q    +WGA+L AC  HG+  + ++ AE   KL
Sbjct: 669 HYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKL 728

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + +N   Y++LS+MY A G W  A ++ K
Sbjct: 729 DLDNAVVYVALSHMYAAAGMWDSAAKLRK 757



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 294/573 (51%), Gaps = 27/573 (4%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           + V +WNAM+   ++   +   L    +M + G+  D TT++  +S+      L+ GR +
Sbjct: 89  RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H  +++AG++ D  + N  +NMYAKCG +  +   F  M     VSW   + G       
Sbjct: 149 HFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRS 208

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E     F++M   G   + ++  S + A +    L +GK +H+  +  G+E     +V  
Sbjct: 209 ETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESD--TAVGT 266

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY++CG  +   + F  +  +D+++WN +I G A  G +EEA ++ ++MQ    V 
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQ-REGVM 325

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P+  T V L++ C +S  L  G+ +H    +     D+ + N+L+  YS+  S+  A L+
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385

Query: 336 FNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ +    D++SW +MI GL            ++EM     + +  T  +IL +C+SP +
Sbjct: 386 FDKMV-RKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAA 444

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE+G+ IH   ++ G + +    N L++MY  CG +  A  +  R+    D   +N +I 
Sbjct: 445 LEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQR-DIVAYNAMIG 503

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKS 500
               +   +EA+K F  + Q++   PD VT +N+++AC   G+LE A E   +H L  K 
Sbjct: 504 GYAAHNLGKEALKLFDRL-QEEGLKPDKVTYINMLNACANSGSLEWARE---IHTLVRKG 559

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               DT V NAL++ Y +C     AS VFE     N+ +WN +I   +Q+     AL+LF
Sbjct: 560 GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             ++ E   P+ ++ VS+LSAC+  G+L  G++
Sbjct: 620 ERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 263/559 (47%), Gaps = 20/559 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +  +  +L  Y+     E +  +F +   K VV+W   I    +          F
Sbjct: 156 GLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIF 215

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +EG+  +  T + +++A +    LK G+ VH   + AG  +D+++    V MYAKC
Sbjct: 216 QKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKC 275

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G        F  +   D ++WNT++ G     Y E+    + +M   G   + ++    +
Sbjct: 276 GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILL 335

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A      L +GK IH+   K G+     + V N+LISMYS+CG I+ A   F  M  KD
Sbjct: 336 NACVNSAALHWGKEIHSRVAKAGFTSD--IGVQNALISMYSRCGSIKDARLVFDKMVRKD 393

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW A+I G A +G   EA  +  EMQ    VEP+  T  ++++ C+    L  GR +H
Sbjct: 394 VISWTAMIGGLAKSGFGAEALTVYQEMQ-QAGVEPNRVTYTSILNACSSPAALEWGRRIH 452

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LF 356
              +   L  D  + N+L++ YS   S+  A  +F+ +    D+V++N+MI G     L 
Sbjct: 453 QQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMI-QRDIVAYNAMIGGYAAHNLG 511

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           KE L L  +           T + +L +C +  SLE+ + IH    K GF ++T   NAL
Sbjct: 512 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNAL 571

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y  CG    A  + ++++  +  S WN +I    Q+G  Q+A++ F+ M + +   P
Sbjct: 572 VSTYAKCGSFSDASIVFEKMTKRNVIS-WNAIIGGSAQHGRGQDALQLFERM-KMEGVKP 629

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT-RVQNALITMYGRCRDIKSASTV 528
           D VT V+++SAC +  L  EG+       +    + T      ++ + GR   +  A  +
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL 689

Query: 529 FESC-YNCNLCTWNCMISA 546
            ++  +  N   W  ++ A
Sbjct: 690 IKTMPFQANTRIWGALLGA 708



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 225/477 (47%), Gaps = 27/477 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +     T+L+  Y+    ++    +F +  N+D++ WN MI    E          +
Sbjct: 257 GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVY 316

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T +I+++A      L  G+ +H    KAG  +D  + N  ++MY++C
Sbjct: 317 NQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC 376

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   D +SW  ++ G   + +  + L  ++EM  +G + + V+ +S +
Sbjct: 377 GSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSIL 436

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L +G+ IH   ++ G     +V   N+L++MYS CG ++ A + F  M  +D
Sbjct: 437 NACSSPAALEWGRRIHQQVVEAGLATDAHVG--NTLVNMYSMCGSVKDARQVFDRMIQRD 494

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V++NA+I G+A +   +EA  L   +Q    ++PD  T + +++ CA+S  L   R +H
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQ-EEGLKPDKVTYINMLNACANSGSLEWAREIH 553

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               +     D  + N+L+  Y+K  S S A ++F  +   N ++SWN++I G       
Sbjct: 554 TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN-VISWNAIIGGSAQHGRG 612

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+ M     +    T +++L +C+    LE G+   C       S +   +  +
Sbjct: 613 QDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC-----SMSQDFAIIPTI 667

Query: 410 MH------MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            H      +    G L  A +L++ +   ++T  W  ++ AC  +G+   A +  +S
Sbjct: 668 EHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAES 724



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 142/324 (43%), Gaps = 24/324 (7%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           QQQ A  +S   + ++  C  ++    G+ +H   ++     D    NALI MY +C  I
Sbjct: 15  QQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSI 74

Query: 523 KSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
           + A  V++  S     + +WN M+  + Q     +AL+L R ++     P+  +I+S LS
Sbjct: 75  EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLS 134

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C   G L  G++IH      G   +  +++ +L+MY+ C               KS  +
Sbjct: 135 SCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVS 194

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+  I  Y   G+   A E+F +M   G+ P + + IS+L+A S    +  G   ++ +L
Sbjct: 195 WTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRIL 254

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
                  +T     +V M  + G  ++  +  + L +      W  M+   +  G  +  
Sbjct: 255 NAGH-ESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGYWEEA 312

Query: 743 KQVAELLFK--LEPENVGYYISLS 764
            +V   + +  + P  + Y I L+
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLN 336


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 235/794 (29%), Positives = 398/794 (50%), Gaps = 52/794 (6%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL-- 83
           +  +F E   + + TWN MI        +      F  MV E +  +  T   ++ A   
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198

Query: 84  --TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
                + ++Q   +H   +  G+   + +CN  +++Y++ G ++ +   F G+   D  S
Sbjct: 199 GSVAFDVVEQ---IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  ++SG   N    + +  F +M   G      + SS ++A   +  L  G+ +H L +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           KLG+    YV   N+L+S+Y   G++ +AE  F  M+ +D V++N +I+G +  G  E+A
Sbjct: 316 KLGFSSDTYV--CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
            +L   M L   +EPD  T+ +L+  C AD  L R G+ +H Y  +     +  +  +L+
Sbjct: 374 MELFKRMHL-DGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTTKLGFASNNKIEGALL 431

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY---LCSQ 365
           + Y+K   +  A L +     + ++V WN M+              +F++M     + +Q
Sbjct: 432 NLYAKCADIETA-LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           +++ +   IL +C     LE G+ IH   +K  F  N    + L+ MY   G L  A+ +
Sbjct: 491 YTYPS---ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
           L R +   D   W  +I   TQ     +A+ TF+ M  +   S D V L N +SAC  L+
Sbjct: 548 LIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQ 605

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              EG+ +H  A  S    D   QNAL+T+Y RC  I+ +   FE     +   WN ++S
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665

Query: 546 AFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            F Q+     AL +F  +  E    N  +  S + A ++   ++ GKQ+H  +   G+  
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
            + + +AL+ MY+ C               K+  +W+++I+AY  HG G EA++ F +M 
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
           +S +RP   +++ +LSACSH GLVD+G+ Y+ +M  EY + P+ EH+VC+VDML R+G L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
             A EFI+ +PI+P   VW  +LSAC  H + ++G+  A  L +LEPE+   Y+ LSN+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905

Query: 768 VALGRWKDAVEIGK 781
               +W DA ++ +
Sbjct: 906 AVSKKW-DARDLTR 918



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 182/709 (25%), Positives = 322/709 (45%), Gaps = 52/709 (7%)

Query: 67  EGIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            GIR +  TL  ++    + N  L +GR +H   +K G+ ++  L     + Y   GDL 
Sbjct: 78  RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M      +WN ++      N   +    F  M  S     N    S V  + 
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEAC 196

Query: 186 CLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
             G +++  V  IHA  +  G  DS    V N LI +YS+ G ++ A R F G+  KD  
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDS--TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW A+I G + N    EA  L  +M ++  + P      +++S C     L  G  +HG 
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            ++     D  + N+L+  Y    +L  AE +F+ ++   D V++N++I+G         
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEK 372

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LFK M     +   +TL +++ +C++  +L  G+ +H +  KLGF++N     AL++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  C D+  A       +   +   WN+++VA       + + + F+ M Q +   P+ 
Sbjct: 433 LYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQ 490

Query: 472 VTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            T  +++  C   G+LEL   G+ +H   +K+   L+  V + LI MY +   + +A  +
Sbjct: 491 YTYPSILKTCIRLGDLEL---GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
                  ++ +W  MI+ ++Q   + +AL  FR +       +E+ + + +SAC  L  L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           + G+QIH      GF  +    +AL+ +YS C                 N AW++++S +
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRP 689
              G   EA+ +F  M   GI     +  S + A S +  + +G Q +  + +  YD   
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--S 725

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHG 737
           ETE    ++ M  + G + +A +  + L +  K  V W A+++A S HG
Sbjct: 726 ETEVCNALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKHG 772



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 161/701 (22%), Positives = 301/701 (42%), Gaps = 75/701 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      +L++ Y ++    S+  +F     +D VT+N +I    +       +  F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  DS TL  +V A +    L +G+ +H  + K G  +++ +    +N+YAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+ ++   F      + V WN ++      +        FR+M       +  +  S +
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                LG+L  G+ IH+  IK  ++ + Y  V + LI MY++ G ++ A         KD
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAY--VCSVLIDMYAKLGKLDTAWDILIRFAGKD 555

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  +I G+      ++A     +M L R +  D   +   +S CA    L+EG+ +H
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
             A       DL   N+L+  YS+   + ++ L F       D ++WN+++SG  +    
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNN 673

Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L +  + +         T  + + + +   +++ GK +H    K G+ + T   NAL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A      +S  ++ S WN +I A +++G   EA+ +F  M    N  P
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHGFGSEALDSFDQMI-HSNVRP 791

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VTLV V+SAC ++ L  +G + +  ++ S  GL  + ++                   
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIA-YFESMNSEYGLSPKPEH------------------- 831

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++   ++     RA E  + +  +P+ +   ++LSAC          
Sbjct: 832 ----------YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC---------- 871

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE-MCN 648
                V H   +   F +  LL++      ++A   ++S      K W+A +L  + M  
Sbjct: 872 -----VVHKNMEIGEFAAHHLLELEP---EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923

Query: 649 SGIRP--------TKSSVISLLSACSHSGLVDEGLQYYNNM 681
            G++          K+S+ S      +  L DE  +Y+ ++
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 202/464 (43%), Gaps = 56/464 (12%)

Query: 370 TLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           TL  +L  C  +  SL+ G+ +H   LKLG  +N      L   Y+  GDL  AF +   
Sbjct: 86  TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +    WN +I          E    F  M   +N +P+  T   V+ AC    +AF
Sbjct: 146 MPERT-IFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEACRGGSVAF 203

Query: 489 E-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           +  + +H   L   +   T V N LI +Y R   +  A  VF+     +  +W  MIS  
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           S+N+ E  A+ LF     L   P   +  S+LSAC ++  L  G+Q+HG V  LGF  ++
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323

Query: 605 FISSALLDMY-------------SNCKSNAA--WSSMISAYGYHGKGWEAIELFHEMCNS 649
           ++ +AL+ +Y             SN     A  ++++I+     G G +A+ELF  M   
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYY----------NNMLE---------------- 683
           G+ P  +++ SL+ ACS  G +  G Q +          NN +E                
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443

Query: 684 -EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHH 736
            +Y +  E E+ V    ML   G    L+ ++   + + I+   P    + ++L  C   
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503

Query: 737 GDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
           GD ++G+Q+   + K   +   Y  S L +MY  LG+   A +I
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/782 (29%), Positives = 390/782 (49%), Gaps = 39/782 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    +   +   L  +  M+  G+R D  T   ++     +  
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR VH   ++ G   +  + N  V MYAKCGD+ ++   F GM   D +SWN +++G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAG 272

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N+  E  L  F  M  +  Q + ++++S   AS  L E+ + K +H   +K G+   
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MY+  G +  A + F  M  KD +SW A+I G+  NG  ++A ++   M
Sbjct: 333 --VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +L  +V PD  T+ + ++ CA    L  G  +H  A  +     +++ N+L++ Y+KS  
Sbjct: 391 EL-HNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           + KA  +F  +A   D+VSW+SMI+G             F+ ML      S  T +A L 
Sbjct: 450 IDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSV-TFIAALS 507

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +L  GK IH + L+ G  +     NAL+ +Y+ CG    A++    +    D  
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS-VHSEKDVV 566

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WNI++     +G    A+  F  M         + + +   +  G L++   G  LH L
Sbjct: 567 SWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLDV---GIKLHEL 623

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           A          V NAL+ MY + + I  A  VF+     ++ +W+ MI+ F  N     A
Sbjct: 624 AQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDA 683

Query: 557 LELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           L  FR++    +PN ++ ++ LSAC   G LR GK+IH +V   G     ++ +ALLD+Y
Sbjct: 684 LYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLY 743

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
             C               K   +W+ M+S +  HG G  A+ LF++M   G  P + + +
Sbjct: 744 VKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV 803

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            L+ ACS +G+V +G + ++   E++ + P  +H+ C+VD+L R GKL EAY  I  +PI
Sbjct: 804 -LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPI 862

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   VWGA+L+ C  H   ++G+  A+++ +LEP +V Y++ L ++Y   G+W     +
Sbjct: 863 KPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARV 922

Query: 780 GK 781
            K
Sbjct: 923 RK 924



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 201/733 (27%), Positives = 336/733 (45%), Gaps = 50/733 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T Y+      ++  +F      D ++WNAMI    EN     GL  F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELF 286

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  ++ +  T+  +  A   ++ +   + +H  ++K G   D + CN  + MY   
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS M   D +SW  ++SG   N +P+K L  +  M       D+V+++SA+
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASAL 406

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA ACLG L  G  +H L    G+    YV V N+L+ MY++   I+ A   F  M  KD
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGF--IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 464

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSV 300
           VVSW+++I GF  N +   +FD L+  + M   V+P+  T +  +S CA +  LR G+ +
Sbjct: 465 VVSWSSMIAGFCFNHR---SFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEI 521

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y +R  +G +  + N+L+D Y K    S A   F ++    D+VSWN M+SG      
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGL 580

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M+Y  +        + L +C     L+ G  +H      GF    +  NA
Sbjct: 581 GDIALSLFNQMMY--TSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 638

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY     +  A  + + ++   D   W+ +I     N    +A+  F+ M    +  
Sbjct: 639 LLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFDALYYFRYML--GHVK 695

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+SVT +  +SAC        GK +H   L+  +G +  V NAL+ +Y +C     A   
Sbjct: 696 PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQ 755

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVL 585
           F      ++ +WN M+S F  +     AL LF     +   P+E++ V ++ AC++ G++
Sbjct: 756 FSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMV 814

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G ++    FH   ++ S +         N K  A    ++S     GK  EA  L + 
Sbjct: 815 IQGWEL----FHRRTEKFSIV--------PNLKHYACMVDLLSRV---GKLTEAYNLINR 859

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRS 704
           M    I+P  +   +LL+ C     V+ G      +LE   + P +  +HV + D+   +
Sbjct: 860 M---PIKPDAAVWGALLNGCRIHRHVELGELAAKVILE---LEPNDVAYHVLLCDLYTDA 913

Query: 705 GKLQEAYEFIKNL 717
           GK  +     K +
Sbjct: 914 GKWAQVARVRKTM 926



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 168/641 (26%), Positives = 295/641 (46%), Gaps = 86/641 (13%)

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           + G++LG          N+++SM  + G+I  A R F  M  +DV SWN ++ G+   G 
Sbjct: 128 SFGLRLG----------NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGF 177

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA DL + M L   + PD+ T   ++  C      R GR VH + +R   G ++ ++N
Sbjct: 178 LEEALDLYYRM-LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN 236

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           +L+  Y+K   +  A  +F+ +A M D +SWN+MI+G            LF  ML    Q
Sbjct: 237 ALVTMYAKCGDIVAARKVFDGMA-MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T+ ++  +      + F K +H + +K GF+ +    N+L+ MY + G +  A  +
Sbjct: 296 PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKI 355

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL---VNVISACG 482
             R+    D   W  +I    +NG   +A++ + ++ +  N +PD VT+   +   +  G
Sbjct: 356 FSRME-TKDAMSWTAMISGYEKNGFPDKALEVY-ALMELHNVNPDDVTIASALAACACLG 413

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L++   G  LH LA          V NAL+ MY + + I  A  VF+     ++ +W+ 
Sbjct: 414 RLDV---GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 470

Query: 543 MISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           MI+ F  N     AL  FR++    +PN ++ ++ LSAC   G LR GK+IH +V   G 
Sbjct: 471 MIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI 530

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
               ++ +ALLD+Y  C               K   +W+ M+S +  HG G  A+ LF++
Sbjct: 531 GSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQ 590

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  + +   +    S L+AC+  G +D G++ +     +  +R     +  +++M  +S 
Sbjct: 591 MMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVAN-ALLEMYAKSK 647

Query: 706 KLQEAYEFIKNLP---------------------------------IQPKPGVWGAMLSA 732
            + +A E  K +                                  ++P    + A LSA
Sbjct: 648 HIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSA 707

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYI-SLSNMYVALGR 772
           C+  G  + GK++   + +    + GY   +L ++YV  G+
Sbjct: 708 CAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQ 748



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 281/604 (46%), Gaps = 40/604 (6%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G++  +   F+ M   D  SWN ++ G     + E+ L  +  M W+G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +    +     + +   G+ +HA  ++ G+ D   V V N+L++MY++CGDI A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDE--VDVLNALVTMYAKCGDIVA 250

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A + F GM   D +SWNA+I G   N + E   +L   M L   V+P++ T+ ++    A
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVT--VA 307

Query: 290 DSLLLREG--RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
             +L   G  + +HG+A++R    D+   NSL+  Y+    +  A  +F+ +    D +S
Sbjct: 308 SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMS 366

Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
           W +MISG  K        E+  L    + +    T+ + L +C     L+ G  +H    
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             GF    +  NAL+ MY     +  A  + + ++   D   W+ +I     N    +A+
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFDAL 485

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F+ M    +  P+SVT +  +SAC        GK +H   L+  +G +  V NAL+ +
Sbjct: 486 YYFRYML--GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP-NEISIVS 574
           Y +C     A   F      ++ +WN M+S F  +     AL LF  + +     +   S
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACS 603

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
            L+AC  LG L  G ++H    + GF     +++ALL+MY+                 K 
Sbjct: 604 ALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 663

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +WSSMI+ + ++ + ++A+  F  M    ++P   + I+ LSAC+ +G +  G + + 
Sbjct: 664 VVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHA 722

Query: 680 NMLE 683
            +L 
Sbjct: 723 YVLR 726



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 258/586 (44%), Gaps = 26/586 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  Y+++     +  +F     KD ++W AMI+   +N      L  
Sbjct: 327 RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV 386

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G I    + N  + MYAK
Sbjct: 387 YALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 446

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   F  M   D VSW+++++G   N+     L YFR M     + ++V+  +A
Sbjct: 447 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAA 505

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A  G L  GK IHA  ++ G     YV   N+L+ +Y +CG    A   F   + K
Sbjct: 506 LSACAATGALRSGKEIHAYVLRCGIGSEGYVP--NALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN ++ GF  +G  + A  L ++M           + +   +       L  G  +
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGR---LDVGIKL 620

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  A  +     +++ N+L++ Y+KS  + KA  +F  +A   D+VSW+SMI+G      
Sbjct: 621 HELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHR 679

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F+ ML      S  T +A L +C +  +L  GK IH + L+ G  +     NA
Sbjct: 680 SFDALYYFRYMLGHVKPNSV-TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNA 738

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y+ CG    A++    +    D   WNI++     +G    A+  F  M  +    
Sbjct: 739 LLDLYVKCGQTSYAWAQFS-VHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMV-EMGEH 796

Query: 469 PDSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           PD VT V ++ AC    +  +G  L H    K  +  + +    ++ +  R   +  A  
Sbjct: 797 PDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYN 855

Query: 528 VFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEIS 571
           +        +   W  +++    ++  E+  L     LE EPN+++
Sbjct: 856 LINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVA 901


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/780 (28%), Positives = 415/780 (53%), Gaps = 71/780 (9%)

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            GI+ D    + +  A        + +  H  + + G+++D S+ N F++ Y KC  +  
Sbjct: 34  RGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEG 93

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D V+WN++ +  ++  +P++ L  FR+MG +  +A+ +++SS +   + 
Sbjct: 94  ARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSD 153

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L +L  GK IH   ++ G  +  +VS  ++ ++ Y++C  +  A+  F  M  +DVV+WN
Sbjct: 154 LQDLKSGKEIHGFVVRHGMVEDVFVS--SAFVNFYAKCLCVREAQTVFDLMPHRDVVTWN 211

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++   +   G  ++  ++  EM ++  V+PD  TV  ++S C+D   L+ G+++HG+A++
Sbjct: 212 SLSSCYVNCGFPQKGLNVFREM-VLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
             +  ++ + N+L++ Y     + +A+ +F+ + P  ++++WNS+ S             
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFD-LMPHRNVITWNSLASCYVNCGFPQKGLN 329

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +F+EM     +     + +ILP+C+  + L+ GK+IH + +K G   +     AL+++Y 
Sbjct: 330 VFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           NC  +  A ++   + H +  + WN +       G  Q+ +  F+ M       PD VT+
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVT-WNSLSSCYVNCGFPQKGLNVFREMVLN-GVKPDLVTM 447

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           ++++ AC +L+    GK +HG A++  M  D  V NAL+++Y +C  ++ A  VF+   +
Sbjct: 448 LSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPH 507

Query: 535 CNLCTWNCMISA-------------FSQ-NKAEVRA---------------------LEL 559
             + +WN +++A             FSQ N+ EV+A                     +E+
Sbjct: 508 REVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEI 567

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR ++   F+P+E +I SIL AC+    LR GK+IH +VF      +   ++AL+DMY+ 
Sbjct: 568 FRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAK 627

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               K   +W++MI A G HG G EA+ LF +M  S ++P  ++   +
Sbjct: 628 CGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCV 687

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHS LV+EG+Q +N+M  ++ V PE EH+ C+VD+  R+G L+EAY FI+ +P++P
Sbjct: 688 LSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEP 747

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
               W A L+ C  + + ++ K  A+ LF+++P     Y++L N+ V    W +A +I K
Sbjct: 748 TAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRK 807



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/639 (25%), Positives = 309/639 (48%), Gaps = 54/639 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++ +    + + AY      E +  +F +   +DVVTWN++    V       GL+ F
Sbjct: 70  GVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF 129

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    ++ +  T+  I+   + +  LK G+ +H   ++ GM+ D  + + FVN YAKC
Sbjct: 130 RKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKC 189

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  ++  F  M   D V+WN++ S  ++  +P+K L  FREM   G + D V++S  +
Sbjct: 190 LCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCIL 249

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + L +L  GK IH   +K G  ++ +VS  N+L+++Y  C  +  A+  F  M  ++
Sbjct: 250 SACSDLQDLKSGKAIHGFALKHGMVENVFVS--NALVNLYESCLCVREAQAVFDLMPHRN 307

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V++WN++   +   G  ++  ++  EM L   V+PD   + +++  C+    L+ G+++H
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGL-NGVKPDPMAMSSILPACSQLKDLKSGKTIH 366

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
           G+A++  +  D+ +  +L++ Y+    + +A+ +F+ + P  ++V+WNS+ S        
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFD-LMPHRNVVTWNSLSSCYVNCGFP 425

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F+EM+    +    T+L+IL +C+  + L+ GK IH + ++ G   +    NAL
Sbjct: 426 QKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNAL 485

Query: 410 MHMYINC----------------------GDLVA------------AFSLLQRISHNSDT 435
           + +Y  C                      G L A             FS + R    +D 
Sbjct: 486 LSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADE 545

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W++VI  C +N   +EA++ F+ M Q     PD  T+ +++ AC   E    GK +H 
Sbjct: 546 ITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDETTIYSILRACSLSECLRMGKEIHC 604

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
              +     D    NAL+ MY +C  +  +  VF+     ++ +WN MI A   +     
Sbjct: 605 YVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKE 664

Query: 556 ALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQI 591
           AL LF  +     +P+  +   +LSAC+   ++  G QI
Sbjct: 665 ALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQI 703



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 158/374 (42%), Gaps = 57/374 (15%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +G   EAIK + S ++ +   PD    + V  AC     A + K  H  A +  +  D  
Sbjct: 18  HGLPNEAIKIYTS-SRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVS 76

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---E 564
           + NA I  YG+C+ ++ A  VF+     ++ TWN + + +       + L +FR +   +
Sbjct: 77  IGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK 136

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            + N +++ SIL  C+ L  L+ GK+IHG V   G  E+ F+SSA ++ Y+ C       
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS--- 666
                   +    W+S+ S Y   G   + + +F EM   G++P   +V  +LSACS   
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 667 --HSGLVDEGLQYYNNMLEE-----------------------YDVRPETEHHVCIVDML 701
              SG    G    + M+E                        +D+ P    +V   + L
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP--HRNVITWNSL 314

Query: 702 G----RSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE- 753
                  G  Q+     + +    ++P P    ++L ACS   D K GK +     K   
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGM 374

Query: 754 PENVGYYISLSNMY 767
            E+V    +L N+Y
Sbjct: 375 VEDVFVCTALVNLY 388



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 10/246 (4%)

Query: 13  LLTAYSNVSYFESSLALF----YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +LTAY     +E  L +F     +    D +TW+ +I  CV+N  +   +  F +M   G
Sbjct: 516 ILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMG 575

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            + D TT+  I+ A +   CL+ G+ +HC   +     D +  N  V+MYAKCG L+ S 
Sbjct: 576 FKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSR 635

Query: 129 CTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
             F  M   D  SWNT I +  +H N  E  L  F +M  S  + D+ + +  +  SAC 
Sbjct: 636 NVFDMMPIKDVFSWNTMIFANGMHGNGKEA-LSLFEKMLLSMVKPDSATFTCVL--SACS 692

Query: 188 GELSYGKVIHALG-IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV-VSW 245
             +   + +     +   +   P       ++ +YS+ G +E A      M  +   ++W
Sbjct: 693 HSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAW 752

Query: 246 NAIIDG 251
            A + G
Sbjct: 753 KAFLAG 758


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 376/720 (52%), Gaps = 42/720 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   IK G   D SL N  V +Y+KC     +          D VSW++++SG + N +
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ LL F EM   G + +  +  S + A +   +L+ G+ +H + +  G+E   +V+  
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA-- 120

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MY++CG ++ + R F G+  ++VVSWNA+   +  +    EA  L  EM +   +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEM-VRSGI 179

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+  ++  +++ CA       GR +HG  ++  L  D    N+L+D YSK+  +  A  
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  IA   D+VSWN++I+G            L  EM    ++ +  TL + L +C +  
Sbjct: 240 VFQDIAH-PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWN 439
             E G+ +H   +K+   ++      L+ MY  C    D   A+  + +     D   WN
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPK----KDIIAWN 354

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I   +Q G   +A+  F  M  + +   +  TL  V+ +  +L+     K +H +++K
Sbjct: 355 ALISGYSQCGDHLDAVSLFSKMFSE-DIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIK 413

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S +  D  V N+L+  YG+C  I  AS +FE     +L  +  MI+A+SQ      AL+L
Sbjct: 414 SGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKL 473

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +  ++    +P+     S+L+AC  L     GKQ+H H    GF  + F S++L++MY+ 
Sbjct: 474 YLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAK 533

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +   +WS+MI  Y  HG G EA+ LF++M   G+ P   +++S+
Sbjct: 534 CGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSV 593

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L AC+H+GLV+EG QY+  M   + ++P  EH+ C++D+LGRSGKL EA E + ++P + 
Sbjct: 594 LCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEA 653

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VWGA+L A   H + ++G++ A++LF LEPE  G ++ L+N+Y + G W++  ++ K
Sbjct: 654 DGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRK 713



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 213/746 (28%), Positives = 354/746 (47%), Gaps = 52/746 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF         L+T YS    F  +  L  E+   DVV+W+++++  V+N  V   L  F
Sbjct: 11  GFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVF 70

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G++ +  T   ++ A +    L  GR VH +++  G  +D  + N  V MYAKC
Sbjct: 71  NEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC 130

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ S   F G+   + VSWN + S  + +    + +  F+EM  SG   +  S+S  +
Sbjct: 131 GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIIL 190

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L E   G+ IH L +K+G +   + +  N+L+ MYS+ G+IE A   F  +   D
Sbjct: 191 NACAGLQEGDLGRKIHGLMLKMGLDLDQFSA--NALVDMYSKAGEIEGAVAVFQDIAHPD 248

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWNAII G  L+   + A  LL EM+      P++ T+ + +  CA       GR +H
Sbjct: 249 VVSWNAIIAGCVLHDCNDLALMLLDEMK-GSGTRPNMFTLSSALKACAAMGFKELGRQLH 307

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I+     DL     L+D YSK   +  A   ++++ P  D+++WN++ISG       
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM-PKKDIIAWNALISGYSQCGDH 366

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +M      F+ +TL  +L S  S ++++  K IH   +K G  ++   +N+L
Sbjct: 367 LDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSL 426

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y  C  +  A  + +  +   D   +  +I A +Q G  +EA+K +  M Q  +  P
Sbjct: 427 LDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGDGEEALKLYLQM-QDADIKP 484

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D     ++++AC NL    +GK LH  A+K     D    N+L+ MY +C  I+ A   F
Sbjct: 485 DPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAF 544

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
               N  + +W+ MI  ++Q+     AL LF  +      PN I++VS+L AC   G++ 
Sbjct: 545 SEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVN 604

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            GKQ         F++          M+    +   ++ MI   G  GK  EA+EL + +
Sbjct: 605 EGKQY--------FEKMEV-------MFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSI 649

Query: 647 CNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLG 702
                 P ++      +LL A      ++ G Q    ML  +D+ PE    HV + ++  
Sbjct: 650 ------PFEADGFVWGALLGAARIHKNIELG-QKAAKML--FDLEPEKSGTHVLLANIYA 700

Query: 703 RSG---KLQEAYEFIKNLPIQPKPGV 725
            +G    + +  +F+K+  ++ +PG+
Sbjct: 701 SAGMWENVAKVRKFMKDSKVKKEPGM 726



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHG 634
           ++H H+   GF  +  + + L+ +YS C+                  +WSS++S Y  +G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
              EA+ +F+EMC  G++  + +  S+L ACS
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACS 93


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 240/805 (29%), Positives = 406/805 (50%), Gaps = 47/805 (5%)

Query: 5   AHLPTSTSLLTAYSNV-SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           +H+  + SLL  YS   S+ +S +  F     +DVV+W  MI A  ++    + +  F E
Sbjct: 144 SHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFRE 203

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA--DSSLCNVFVNMYAKC 121
           M+ EG   +S T + I+S     + L+QGR +H L +++ + +  D  + N+ +NMY KC
Sbjct: 204 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKC 263

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +  TF+ M   D VSW  ++     +      L  FREM   G   ++V+  S +
Sbjct: 264 GCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSIL 323

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +       L  G+ IHAL ++   E   +V V NSL+ MYS+C   E +   F  M+ +D
Sbjct: 324 SGCEAPSLLEQGRQIHALVVESSLES--HVVVANSLLGMYSRCRSWEDSRSLFDRMSVRD 381

Query: 242 VVSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VSW+ II   +       +A  L   M L   V P    +  ++  C     L+ G+ V
Sbjct: 382 SVSWSTIIMACSREDSHCRDALPLYRSM-LHEGVMPKTLALSMVLEACGSLAELKGGKLV 440

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + I   L  DL+ + SL++ Y+K  ++ +A  +F+ I   + ++ WNSMI+       
Sbjct: 441 HAHVIESGLEGDLVGI-SLVNMYAKCGTVGEARKVFDRINNRSRIL-WNSMITAYQEKDP 498

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM          T + +L +C +   LE G++IH   +  GF+ +     AL
Sbjct: 499 HEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATAL 558

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            +MY  CG L  A  +   +    D   WN +I A  Q    + AI    +M Q +   P
Sbjct: 559 FNMYAKCGSLGEARGVFDSMVFR-DVVSWNNMIAAYVQGRDGEGAISLCWAM-QLEGMRP 616

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T  ++++AC +     +G+ +H    +S +  D  +   LITMY  C  + +A  +F
Sbjct: 617 DKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIF 676

Query: 530 ESCY------NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           ++ +      + +L  W  MI+A+ Q+    +ALEL+  +   + E + ++ +S+L+AC 
Sbjct: 677 DNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACA 736

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            L  LR G+ IH  V   G   +  ++++++ MY  C               K  + W++
Sbjct: 737 HLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTA 796

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +I++Y  HG G +A+ +F  +   GI  +  + +++LSACSH GL++EG +++ +M  E 
Sbjct: 797 LIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASM-AEL 855

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  EHH C+VD+L R+G L  A EF+  +P+     V  A+L+AC  HGD +  ++V
Sbjct: 856 GIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERARRV 915

Query: 746 AELLFKLEPENVGYYISLSNMYVAL 770
           AE L  L+PE+   Y++LSN+ + L
Sbjct: 916 AEKLEALDPESEAPYVTLSNIEMVL 940



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 222/796 (27%), Positives = 386/796 (48%), Gaps = 60/796 (7%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y      + ++  F     +DVV+W  MI A  ++    + L  F EM+ EG   +S T 
Sbjct: 55  YVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTF 114

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC-TFSGMH 135
           + I+S     + L+QGR +H L +++ + +   + N  + MY++C     S   TF+ M 
Sbjct: 115 VSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMK 174

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             D VSW  ++     +      +  FREM   G   ++V+  S ++       L  G+ 
Sbjct: 175 RRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQ 234

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHAL ++   E    + V N  I+MY +CG ++ A + F  M  +DVVSW  +I  ++ +
Sbjct: 235 IHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQD 294

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           GKF  +  L  EM L+    P+  T V+++S C    LL +GR +H   +   L   +++
Sbjct: 295 GKFSLSLQLFREM-LLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVV 353

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYL 362
            NSL+  YS+  S   +  LF+ ++ + D VSW+++I               L++ ML+ 
Sbjct: 354 ANSLLGMYSRCRSWEDSRSLFDRMS-VRDSVSWSTIIMACSREDSHCRDALPLYRSMLHE 412

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
                   L  +L +C S   L+ GK +H   ++ G   + +G+ +L++MY  CG +  A
Sbjct: 413 GVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGI-SLVNMYAKCGTVGEA 471

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +  RI++ S    WN +I A  Q     EA+  F+ M Q +  SPD +T + V++AC 
Sbjct: 472 RKVFDRINNRSRI-LWNSMITA-YQEKDPHEALHLFREM-QPEGVSPDRITFMTVLNACV 528

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           N      G+++H   + S    D RV  AL  MY +C  +  A  VF+S    ++ +WN 
Sbjct: 529 NAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNN 588

Query: 543 MISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           MI+A+ Q +    A+ L   ++ E   P++ +  S+L+AC+    L  G+QIH  +    
Sbjct: 589 MIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESR 648

Query: 600 FQENSFISSALLDMYSNCKS--NAA-------------------WSSMISAYGYHGKGWE 638
            + +  + + L+ MY+NC S  NA                    W+SMI+AY  HG+  +
Sbjct: 649 LENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRK 708

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+EL+ +M +  +   + + IS+L+AC+H   + +G   +  ++    +  +      IV
Sbjct: 709 ALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRR-GLATDVAVANSIV 767

Query: 699 DMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            M G+ G   EA   +E  K+  I     +W A++++ + HG    G+Q   +  +L  +
Sbjct: 768 FMYGKCGSFDEASIVFEKTKHKDI----SLWTALIASYARHGH---GEQALWIFRRLRQD 820

Query: 756 NVGYYISLSNM-YVAL 770
                I LSN+ +VA+
Sbjct: 821 G----IELSNLTFVAM 832



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 211/734 (28%), Positives = 356/734 (48%), Gaps = 54/734 (7%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   GI  D   +  +++A T++  L++G+++        +  D  + N+ +NMY KCG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L+ +  TF+ M   D VSW  ++     +      L  FREM   G   ++V+  S ++ 
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE-RAFWGMTCKDV 242
                 L  G+ IHAL ++   E   +V V NSL+ MYS+C   E +  + F  M  +DV
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLES--HVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDV 178

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSW  +I  ++ +GKF  +  L  EM L+    P+  T V+++S C    LL +GR +H 
Sbjct: 179 VSWTVMIGAYSQDGKFSLSIQLFREM-LLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHA 237

Query: 303 YAIRRLLG--YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
             +   L    D+ ++N  ++ Y K   L  A   F A     D+VSW  MI        
Sbjct: 238 LVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTF-ARMKRRDVVSWTVMIGAYSQDGK 296

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF+EML   +  +  T ++IL  C +P  LE G+ IH   ++    ++ +  N+
Sbjct: 297 FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANS 356

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT-QNGHFQEAIKTFKSMTQQQNA 467
           L+ MY  C     + SL  R+S   D+  W+ +I+AC+ ++ H ++A+  ++SM   +  
Sbjct: 357 LLGMYSRCRSWEDSRSLFDRMSVR-DSVSWSTIIMACSREDSHCRDALPLYRSML-HEGV 414

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P ++ L  V+ ACG+L     GK +H   ++S +  D  V  +L+ MY +C  +  A  
Sbjct: 415 MPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARK 473

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           VF+   N +   WN MI+A+ Q K    AL LFR ++ E   P+ I+ +++L+AC     
Sbjct: 474 VFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAAD 532

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L +G+ IH  +   GF  +  +++AL +MY+ C               +   +W++MI+A
Sbjct: 533 LENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAA 592

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYD 686
           Y     G  AI L   M   G+RP K++  SLL+ACS    + +G Q ++ + E   E D
Sbjct: 593 YVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLEND 652

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-----VWGAMLSACSHHGDTKM 741
           +   T     ++ M    G L  A E   N+    +       +W +M++A   HG+ + 
Sbjct: 653 IVMVT----GLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRK 708

Query: 742 GKQVAELLFKLEPE 755
             ++ E +   + E
Sbjct: 709 ALELYEQMHSRQVE 722



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 9/302 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A +  +T+L   Y+       +  +F     +DVV+WN MI A V+ R     +   
Sbjct: 547 GFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLC 606

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+R D  T   +++A +  N L  GR +H    ++ +  D  +    + MYA C
Sbjct: 607 WAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANC 666

Query: 122 GDLNSSECTF------SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           G LN++   F      S  H  D   W ++++    +    K L  + +M     +AD V
Sbjct: 667 GSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRV 726

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +  S + A A L +L  G+ IHA  ++ G   +  V+V NS++ MY +CG  + A   F 
Sbjct: 727 TFISVLNACAHLSDLRQGQAIHARVMRRGL--ATDVAVANSIVFMYGKCGSFDEASIVFE 784

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               KD+  W A+I  +A +G  E+A  +   ++    +E    T V ++S C+   L+ 
Sbjct: 785 KTKHKDISLWTALIASYARHGHGEQALWIFRRLR-QDGIELSNLTFVAMLSACSHVGLIE 843

Query: 296 EG 297
           EG
Sbjct: 844 EG 845



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 1/150 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +  + S++  Y     F+ +  +F +T +KD+  W A+I +   +      L  
Sbjct: 754 RGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWI 813

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  + ++GI   + T + ++SA + +  +++G        + G+  +    +  V++ A+
Sbjct: 814 FRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSCLVDLLAR 873

Query: 121 CGDLNSSECTFSGMH-CADTVSWNTIMSGC 149
            G L+++E   S M   A+T+    +++ C
Sbjct: 874 AGHLHTAEEFLSRMPVAANTIVLTALLAAC 903


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 230/750 (30%), Positives = 388/750 (51%), Gaps = 46/750 (6%)

Query: 67  EGIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            G+ FDS   L   S + +       L +G+ +H   IK+G+  DS L N  VN+YAKCG
Sbjct: 118 RGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 177

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
             N +   F  +   D VSW  +++G +   Y    +  F EM   G +A+  + ++A+ 
Sbjct: 178 SANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALK 237

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A +   +L +GK +HA  IK+G  D   + V ++L+ +Y++CG++  AER F  M  ++ 
Sbjct: 238 ACSMCLDLEFGKQVHAEAIKVG--DFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNA 295

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWNA+++GFA  G  E+  +L   M     +     T+ T++  CA+S  LR G+ VH 
Sbjct: 296 VSWNALLNGFAQMGDAEKVLNLFCRMT-GSEINFSKFTLSTVLKGCANSGNLRAGQIVHS 354

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
            AIR     D  +   L+D YSK      A  +F  I    D+VSW+++I+ L       
Sbjct: 355 LAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED-PDVVSWSAIITCLDQKGQSR 413

Query: 356 -----FKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                FK M +   + +QF   TL +++ +      L +G+SIH    K GF  +    N
Sbjct: 414 EAAEVFKRMRHSGVIPNQF---TLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCN 470

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY+  G +     + +  + N D   WN ++     N      ++ F  M  +   
Sbjct: 471 ALVTMYMKIGSVQDGCRVFEATT-NRDLISWNALLSGFHDNETCDTGLRIFNQMLAE-GF 528

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           +P+  T ++++ +C +L     GK +H   +K+ +  +  V  AL+ MY + R ++ A T
Sbjct: 529 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 588

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           +F      +L  W  +++ ++Q+    +A++ F  ++ E   PNE ++ S LS C+++  
Sbjct: 589 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 648

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L  G+Q+H      G   + F++SAL+DMY+ C               +   +W+++I  
Sbjct: 649 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 708

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           Y  HG+G +A++ F  M + G  P + + I +LSACSH GL++EG +++N++ + Y + P
Sbjct: 709 YSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 768

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
             EH+ C+VD+LGR+GK  E   FI+ + +     +W  +L AC  HG+ + G++ A  L
Sbjct: 769 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL 828

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           F+LEPE    YI LSNM+ A G W D   +
Sbjct: 829 FELEPEIDSNYILLSNMFAAKGMWDDVTNV 858



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 205/768 (26%), Positives = 360/768 (46%), Gaps = 58/768 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+       +  +F E   +DVV+W A+IT  V        ++ F EM  EG+  
Sbjct: 168 SLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEA 227

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T    + A +    L+ G+ VH  +IK G  +D  + +  V++YAKCG++  +E  F
Sbjct: 228 NEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVF 287

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSWN +++G       EK L  F  M  S       +LS+ +   A  G L 
Sbjct: 288 LCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLR 347

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+++H+L I++G E   ++S    L+ MYS+CG    A + F  +   DVVSW+AII  
Sbjct: 348 AGQIVHSLAIRIGCELDEFISCC--LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITC 405

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G+  EA ++   M+    V P+  T+ +L+S   D   L  G S+H    +    Y
Sbjct: 406 LDQKGQSREAAEVFKRMR-HSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEY 464

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + N+L+  Y K  S+     +F A     DL+SWN+++SG            +F +M
Sbjct: 465 DNTVCNALVTMYMKIGSVQDGCRVFEATTN-RDLISWNALLSGFHDNETCDTGLRIFNQM 523

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L      +  T ++IL SC+S   ++ GK +H   +K     N     AL+ MY     L
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 583

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A ++  R+    D   W +++    Q+G  ++A+K F  M Q++   P+  TL + +S
Sbjct: 584 EDAETIFNRLIKR-DLFAWTVIVAGYAQDGQGEKAVKCFIQM-QREGVKPNEFTLASSLS 641

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C  +     G+ LH +A+K+    D  V +AL+ MY +C  ++ A  VF+   + +  +
Sbjct: 642 GCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVS 701

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I  +SQ+    +AL+ F  +  E   P+E++ + +LSAC+ +G++  GK+      
Sbjct: 702 WNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK------ 755

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           H          ++L  +Y    +   ++ M+   G  GK  E      EM     + T +
Sbjct: 756 HF---------NSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEM-----KLTSN 801

Query: 657 SVI--SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSG---KLQEA 710
            +I  ++L AC   G ++ G +     ++ +++ PE + +++ + +M    G    +   
Sbjct: 802 VLIWETVLGACKMHGNIEFGERA---AMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNV 858

Query: 711 YEFIKNLPIQPKPG-----VWGAMLSACSHHGDTKMGKQVAELLFKLE 753
              +    ++ +PG     V G +    SH G      ++ E+  KL+
Sbjct: 859 RALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSH---PKIREIHLKLQ 903



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 275/585 (47%), Gaps = 29/585 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++L+  Y+       +  +F     ++ V+WNA++    +       L+ F
Sbjct: 259 GDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLF 318

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    I F   TL  ++        L+ G++VH L+I+ G   D  +    V+MY+KC
Sbjct: 319 CRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKC 378

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D VSW+ I++         +    F+ M  SG   +  +L+S V
Sbjct: 379 GLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLV 438

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+  LG+L YG+ IHA   K G+E     +V N+L++MY + G ++   R F   T +D
Sbjct: 439 SAATDLGDLYYGESIHACVCKYGFEYDN--TVCNALVTMYMKIGSVQDGCRVFEATTNRD 496

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWNA++ GF  N   +    + ++M L     P++ T ++++  C+    +  G+ VH
Sbjct: 497 LISWNALLSGFHDNETCDTGLRIFNQM-LAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              ++  L  +  +  +L+D Y+K+  L  AE +FN +    DL +W  +++G       
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK-RDLFAWTVIVAGYAQDGQG 614

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M     + +  TL + L  C+   +L+ G+ +H   +K G S +    +AL
Sbjct: 615 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 674

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +   +  + DT  WN +I   +Q+G   +A+K F++M  +    P
Sbjct: 675 VDMYAKCGCVEDAEVVFDGLV-SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV-P 732

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
           D VT + V+SAC ++ L  EGK  H  +L  + G+   +++   ++ + GR        +
Sbjct: 733 DEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 791

Query: 528 VFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEP 567
             E      N+  W  ++ A   +      E  A++LF   E EP
Sbjct: 792 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF---ELEP 833



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 5/277 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+   + E +  +F     +D+  W  ++    ++      +  F +M  EG++
Sbjct: 571 TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 630

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S  +++  L  GR +H ++IKAG   D  + +  V+MYAKCG +  +E  
Sbjct: 631 PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 690

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+   DTVSWNTI+ G   +    K L  F  M   G   D V+    ++A + +G +
Sbjct: 691 FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
             GK  H   +   Y  +P +     ++ +  + G     E     M    +V+ W  ++
Sbjct: 751 EEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL 809

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
               ++G  E  F     M+L   +EP+I +   L+S
Sbjct: 810 GACKMHGNIE--FGERAAMKLFE-LEPEIDSNYILLS 843


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 225/750 (30%), Positives = 384/750 (51%), Gaps = 42/750 (5%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           ++G R +S   + ++    ++  L  GR VH   I+   + D    N  +NMY +CG + 
Sbjct: 134 QQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIE 193

Query: 126 SSECTFSGM-HCADTV-SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            +   ++ + H   TV SWN ++ G +   Y E+ L   REM   G      +    +++
Sbjct: 194 EARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSS 253

Query: 184 SACLGELSYGKVIH--ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                 L  G+ IH  A+  +L ++    V+V N +++MY++CG I  A   F  M  K 
Sbjct: 254 CKSPSALECGREIHVEAMKARLLFD----VNVANCILNMYAKCGSIHEAREVFDKMETKS 309

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  II G+A  G  E AF++  +MQ    V P+  T + +++  +    L+ G++VH
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQ-QEGVVPNRITYINVLNAFSGPAALKWGKTVH 368

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
            + +      DL +  +L+  Y+K  S      +F  +    DL++WN+MI GL     +
Sbjct: 369 SHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGNW 427

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +E   +  Q           T + +L +C +P +L +G+ IH   +K GF  +    NAL
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNAL 487

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  L  ++    D   W  +I    ++G   EA+  F+ M QQ    P
Sbjct: 488 ISMYARCGSIKDARLLFNKMV-RKDIISWTAMIGGLAKSGLGAEALAVFQDM-QQAGLKP 545

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VT  ++++AC +      G+ +H   +++ +  D  V N L+ MY  C  +K A  VF
Sbjct: 546 NRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVF 605

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
           +     ++  +N MI  ++ +     AL+LF  L+ E   P++++ +++L+AC   G L 
Sbjct: 606 DRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 665

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNA-AWSSMISAYG 631
             K+IH  V   G+  ++ + +AL+  Y+ C              K N  +W+++I    
Sbjct: 666 WAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCA 725

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG+G + ++LF  M   GI+P   + +SLLSACSH+GL++EG +Y+ +M  ++ + P  
Sbjct: 726 QHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTI 785

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD+LGR+G+L E    IK +P Q    +WGA+L AC  HG+  + ++ AE   K
Sbjct: 786 EHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLK 845

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L+P+N   Y++LS+MY A G W  A ++ K
Sbjct: 846 LDPDNAAVYVALSHMYAAAGMWDSAAKLRK 875



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 294/570 (51%), Gaps = 21/570 (3%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           + V +WNAM+   V+   +   L    EM + G+     T + ++S+    + L+ GR +
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H  ++KA ++ D ++ N  +NMYAKCG ++ +   F  M     VSW  I+ G     + 
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E     F++M   G   + ++  + + A +    L +GK +H+  +  G+E    ++V  
Sbjct: 327 EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESD--LAVGT 384

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY++CG  +   + F  +  +D+++WN +I G A  G +EEA ++ H+MQ    + 
Sbjct: 385 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQ-REGMM 443

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P+  T V L++ C +   L  GR +H   ++    +D+ + N+L+  Y++  S+  A LL
Sbjct: 444 PNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLL 503

Query: 336 FNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPES 383
           FN +    D++SW +MI GL            F++M     + +  T  +IL +C+SP +
Sbjct: 504 FNKMV-RKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAA 562

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L++G+ IH   ++ G + +    N L++MY  CG +  A  +  R++   D   +N +I 
Sbjct: 563 LDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR-DIVAYNAMIG 621

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
               +   +EA+K F  + Q++   PD VT +N+++AC N       K +H L LK    
Sbjct: 622 GYAAHNLGKEALKLFDRL-QEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYL 680

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            DT + NAL++ Y +C     A  VF+     N+ +WN +I   +Q+      L+LF  +
Sbjct: 681 SDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERM 740

Query: 564 EFE---PNEISIVSILSACTQLGVLRHGKQ 590
           + E   P+ ++ VS+LSAC+  G+L  G++
Sbjct: 741 KMEGIKPDIVTFVSLLSACSHAGLLEEGRR 770



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 263/549 (47%), Gaps = 22/549 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L  Y+       +  +F +   K VV+W  +I    +     +    F +M +EG+  +
Sbjct: 285 ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T + +++A +    LK G+ VH   + AG  +D ++    V MYAKCG        F 
Sbjct: 345 RITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFE 404

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   D ++WNT++ G       E+    + +M   G   + ++    + A      L +
Sbjct: 405 KLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHW 464

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH+  +K G+     +SV N+LISMY++CG I+ A   F  M  KD++SW A+I G 
Sbjct: 465 GREIHSRVVKDGFMFD--ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGL 522

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A +G   EA  +  +MQ    ++P+  T  ++++ C+    L  GR +H   I   L  D
Sbjct: 523 AKSGLGAEALAVFQDMQ-QAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQFS 367
             + N+L++ YS   S+  A  +F+ +    D+V++N+MI G     L KE L L  +  
Sbjct: 582 AHVANTLVNMYSMCGSVKDARQVFDRMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQ 640

Query: 368 FS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T + +L +C +  SLE+ K IH   LK G+ ++T   NAL+  Y  CG   
Sbjct: 641 EEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFS 700

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +  ++   +  S WN +I  C Q+G  Q+ ++ F+ M + +   PD VT V+++SA
Sbjct: 701 DALLVFDKMMKRNVIS-WNAIIGGCAQHGRGQDVLQLFERM-KMEGIKPDIVTFVSLLSA 758

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNL 537
           C +  L  EG+  +  ++    G+   +++   ++ + GR   +     + ++  +  N 
Sbjct: 759 CSHAGLLEEGRR-YFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANT 817

Query: 538 CTWNCMISA 546
             W  ++ A
Sbjct: 818 RIWGALLGA 826



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 246/509 (48%), Gaps = 24/509 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   T+L+  Y+    ++    +F +  N+D++ WN MI    E          +
Sbjct: 375 GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T +I+++A      L  GR +H   +K G + D S+ N  ++MYA+C
Sbjct: 435 HQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC 494

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   D +SW  ++ G   +    + L  F++M  +G + + V+ +S +
Sbjct: 495 GSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSIL 554

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L +G+ IH   I+ G     +V+  N+L++MYS CG ++ A + F  MT +D
Sbjct: 555 NACSSPAALDWGRRIHQQVIEAGLATDAHVA--NTLVNMYSMCGSVKDARQVFDRMTQRD 612

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V++NA+I G+A +   +EA  L   +Q    ++PD  T + +++ CA+S  L   + +H
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQ-EEGLKPDKVTYINMLNACANSGSLEWAKEIH 671

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++     D  + N+L+  Y+K  S S A L+F+ +   N ++SWN++I G       
Sbjct: 672 SLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRN-VISWNAIIGGCAQHGRG 730

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNA 408
                LF+ M     +    T +++L +C+    LE G+   C   +  G +        
Sbjct: 731 QDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ +    G L    +L++ +   ++T  W  ++ AC  +G+   A +  +S  +     
Sbjct: 791 MVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLK---LD 847

Query: 469 PDS----VTLVNVISACGNLELAFEGKSL 493
           PD+    V L ++ +A G  + A + + L
Sbjct: 848 PDNAAVYVALSHMYAAAGMWDSAAKLRKL 876



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 30/327 (9%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           QQQ A  +S   + ++  C  ++    G+ +H   ++    LD    NALI MY +C  I
Sbjct: 133 QQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSI 192

Query: 523 KSASTVFESCYNC--NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
           + A  V+    +    + +WN M+  + Q      AL+L R ++         + + +LS
Sbjct: 193 EEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLS 252

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C     L  G++IH          +  +++ +L+MY+ C               KS  +
Sbjct: 253 SCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVS 312

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+ +I  Y   G    A E+F +M   G+ P + + I++L+A S    +  G   ++++L
Sbjct: 313 WTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHIL 372

Query: 683 ---EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
               E D+   T     +V M  + G  ++  +  + L +      W  M+   +  G+ 
Sbjct: 373 NAGHESDLAVGT----ALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIGGLAEGGNW 427

Query: 740 KMGKQVAELLFK--LEPENVGYYISLS 764
           +   ++   + +  + P  + Y I L+
Sbjct: 428 EEASEIYHQMQREGMMPNKITYVILLN 454


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 223/691 (32%), Positives = 357/691 (51%), Gaps = 49/691 (7%)

Query: 134 MHCADTVSWNTIMSGCLHNNY---PEKCLLYFREMG--------WSGEQADNVSLS---S 179
           + C  +V  +  +S   HNN        +  F EMG         S  Q   + L+   S
Sbjct: 3   LSCGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYCS 62

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +   A L  L  GK +H++    G      +     L+ MY  CGD+    R F G+  
Sbjct: 63  VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGA--KLVFMYVNCGDLVKGRRIFDGILN 120

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
             +  WN ++  +A  G + E+  L  +MQ +  +  D  T   ++   A S  +RE + 
Sbjct: 121 DKIFLWNLLMSEYAKIGNYRESVGLFEKMQEL-GIRGDSYTFTCVLKGFAASAKVRECKR 179

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VHGY ++   G    ++NSL+  Y K   +  A +LF+ ++   D+VSWNSMISG     
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD-RDVVSWNSMISGCTMNG 238

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F +ML L      +TL+ +L +C +  +L  G+++H + +K GFS   +  N
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+ MY  CG+L  A  +  ++   +  S W  +I A  + G   EAI  F  M Q +  
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVS-WTSIIAAHVREGLHYEAIGLFDEM-QSKGL 356

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD   + +V+ AC       +G+ +H    K+ MG +  V NAL+ MY +C  ++ A+ 
Sbjct: 357 RPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANL 416

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVL 585
           +F      N+ +WN MI  +SQN     AL+LF  ++   +P+++++  +L AC  L  L
Sbjct: 417 IFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAAL 476

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G++IHGH+   G+  +  ++ AL+DMY  C               K    W+ MI+ Y
Sbjct: 477 EKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGY 536

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G HG G EAI  F +M  +GI P +SS  S+L AC+HSGL+ EG + +++M  E ++ P+
Sbjct: 537 GMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPK 596

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+L RSG L  AY+FI+ +PI+P   +WGA+LS C  H D ++ ++VAE +F
Sbjct: 597 LEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIF 656

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +LEPEN  YY+ L+N+Y    +W++  +I +
Sbjct: 657 ELEPENTRYYVLLANVYAEAEKWEEVKKIQR 687



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 293/618 (47%), Gaps = 52/618 (8%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLHFFGEMVEEG 68
             L+  Y N         +F    N  +  WN +++  A + N    +GL  F +M E G
Sbjct: 96  AKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGL--FEKMQELG 153

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           IR DS T   ++        +++ + VH   +K G  + +++ N  +  Y KCG++ S+ 
Sbjct: 154 IRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESAR 213

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D VSWN+++SGC  N +    L +F +M   G   D+ +L + + A A +G
Sbjct: 214 ILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVG 273

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L+ G+ +HA G+K G+  S  V   N+L+ MYS+CG++  A   F  M    +VSW +I
Sbjct: 274 NLTLGRALHAYGVKAGF--SGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSI 331

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I      G   EA  L  EMQ  + + PDI  V +++  CA S  L +GR VH +  +  
Sbjct: 332 IAAHVREGLHYEAIGLFDEMQ-SKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNN 390

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLY 361
           +G +L + N+LM+ Y+K  S+ +A L+F+ + P+ ++VSWN+MI G  +         L+
Sbjct: 391 MGSNLPVSNALMNMYAKCGSMEEANLIFSQL-PVKNIVSWNTMIGGYSQNSLPNEALQLF 449

Query: 362 LCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           L  Q        T+  +LP+C    +LE G+ IH   L+ G+ ++     AL+ MY+ CG
Sbjct: 450 LDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCG 509

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            LV A  L   I    D   W ++I     +G  +EAI TF+ M +     P+  +  ++
Sbjct: 510 LLVLAQQLFDMIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKM-RVAGIEPEESSFTSI 567

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC +  L  EG  L   ++KS   ++ ++++                           
Sbjct: 568 LYACTHSGLLKEGWKLFD-SMKSECNIEPKLEH--------------------------- 599

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             + CM+    ++    RA +    +  +P+     ++LS C     +   +++  H+F 
Sbjct: 600 --YACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFE 657

Query: 598 LGFQENSFISSALLDMYS 615
           L   EN+     L ++Y+
Sbjct: 658 LE-PENTRYYVLLANVYA 674



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 160/523 (30%), Positives = 250/523 (47%), Gaps = 28/523 (5%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            ++  L+ G+ VH +    GM  D  L    V MY  CGDL      F G+       WN
Sbjct: 68  AELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWN 127

Query: 144 TIMSGCLH-NNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
            +MS      NY E   L+   +E+G  G+      +    AASA + E    K +H   
Sbjct: 128 LLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVREC---KRVHGYV 184

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +KLG+    Y +V NSLI+ Y +CG++E+A   F  ++ +DVVSWN++I G  +NG    
Sbjct: 185 LKLGF--GSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRN 242

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
             +   +M L   V+ D AT+V ++  CA+   L  GR++H Y ++      ++  N+L+
Sbjct: 243 GLEFFIQM-LNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSF 368
           D YSK  +L+ A  +F  +     +VSW S+I+            GLF EM     +   
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETT-IVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDI 360

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
             + +++ +C    SL+ G+ +H    K    +N    NALM+MY  CG +  A  +  +
Sbjct: 361 YAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQ 420

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +  S WN +I   +QN    EA++ F  M  Q+   PD VT+  V+ AC  L    
Sbjct: 421 LPVKNIVS-WNTMIGGYSQNSLPNEALQLFLDM--QKQLKPDDVTMACVLPACAGLAALE 477

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +G+ +HG  L+     D  V  AL+ MY +C  +  A  +F+     ++  W  MI+ + 
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537

Query: 549 QN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            +   K  +   E  R    EP E S  SIL ACT  G+L+ G
Sbjct: 538 MHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEG 580



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 18/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++     SL+ AY      ES+  LF E  ++DVV+WN+MI+ C  N     GL FF
Sbjct: 188 GFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFF 247

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  G+  DS TL+ ++ A   +  L  GR +H   +KAG        N  ++MY+KC
Sbjct: 248 IQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKC 307

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+LN +   F  M     VSW +I++  +      + +  F EM   G + D  +++S V
Sbjct: 308 GNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVV 367

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A AC   L  G+ +H   IK     S  + V+N+L++MY++CG +E A   F  +  K+
Sbjct: 368 HACACSNSLDKGREVHN-HIKKNNMGSN-LPVSNALMNMYAKCGSMEEANLIFSQLPVKN 425

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN +I G++ N    EA  L  +MQ  + ++PD  T+  ++  CA    L +GR +H
Sbjct: 426 IVSWNTMIGGYSQNSLPNEALQLFLDMQ--KQLKPDDVTMACVLPACAGLAALEKGREIH 483

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ +R+    DL +  +L+D Y K   L  A+ LF+ I P  D++ W  MI+G       
Sbjct: 484 GHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMI-PKKDMILWTVMIAGYGMHGFG 542

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                 F++M     +   S+  +IL +C     L+ G K     + +            
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ + I  G+L  A+  ++ +    D + W  ++  C
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGC 639



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 143/327 (43%), Gaps = 31/327 (9%)

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           M ++CG  V   + L   +HN+ T   N  I    + G  + A+K    +++ Q +  + 
Sbjct: 1   MDLSCGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKL---LSRSQRSELEL 57

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T  +V+  C  L+   +GK +H +   + M +D  +   L+ MY  C D+     +F+ 
Sbjct: 58  NTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDG 117

Query: 532 CYNCNLCTWNCMISAFSQ---NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
             N  +  WN ++S +++    +  V   E  + L    +  +   +L        +R  
Sbjct: 118 ILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVREC 177

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K++HG+V  LGF   + + ++L+  Y  C               +   +W+SMIS    +
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G     +E F +M N G+    ++++++L AC++ G +  G       L  Y V+     
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLG-----RALHAYGVKAGFSG 292

Query: 694 HV----CIVDMLGRSGKLQEAYE-FIK 715
            V     ++DM  + G L  A E F+K
Sbjct: 293 GVMFNNTLLDMYSKCGNLNGANEVFVK 319


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 201/598 (33%), Positives = 325/598 (54%), Gaps = 35/598 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           + L  MY+ CGD++ A R F  +  +  + WN +++  A +G F  +  L  +M +   V
Sbjct: 133 SKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGV 191

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E D  T   +    +    +  G  +HGY ++   G    + NSL+ FY K++ +  A  
Sbjct: 192 EMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARK 251

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ +    D++SWNS+I+G            +F +ML+   +   +T++++   C    
Sbjct: 252 VFDEMTE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSR 310

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +  G+++HC+ +K  FS      N L+ MY  CGDL +A  + + +S  S  S +  +I
Sbjct: 311 LISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVS-YTSMI 369

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               + G   EA+K F+ M +++  SPD  T+  V++ C    L  EGK +H    ++ M
Sbjct: 370 AGYAREGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDM 428

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           G D  V NAL+ MY +C  ++ A  VF      ++ +WN +I  +S+N     AL LF  
Sbjct: 429 GFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNL 488

Query: 563 L----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
           L     F P+E ++  +L AC  L     G++IHG++   G+  +  ++++L+DMY+ C 
Sbjct: 489 LLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K   +W+ MI+ YG HG G EAI LF++M  +GI P + S +SLL 
Sbjct: 549 ALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLY 608

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSHSGLVDEG +++N M  E  + P  EH+ CIVDML R+G L +AY FI+N+PI P  
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDA 668

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +WGA+L  C  H D K+ ++VAE +F+LEPEN GYY+ ++N+Y    +W++   + K
Sbjct: 669 TIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRK 726



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/532 (29%), Positives = 264/532 (49%), Gaps = 20/532 (3%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL  ++        LK G+ V       G + DS+L +    MY  CGDL  +   F
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +     + WN +M+    +      +  F++M  SG + D+ + S    + + L  ++
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   +K G+ +    SV NSL++ Y +   +++A + F  MT +DV+SWN+II+G
Sbjct: 213 GGEQLHGYILKSGFGERN--SVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG  E+   +  +M L   +E D+AT+V++ + CADS L+  GR+VH + ++     
Sbjct: 271 YVSNGLAEKGLSVFVQM-LFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSR 329

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +    N+L+D YSK   L  A+++F  ++  + +VS+ SMI+G            LF+EM
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS-VVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T+ A+L  C     L+ GK +H W  +     +    NALM MY  CG +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +    D   WN VI   ++N +  EA+  F  +  ++  SPD  T+  V+ 
Sbjct: 449 REAELVFSEM-RVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLP 507

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L    +G+ +HG  +++    D  V N+L+ MY +C  +  A  +F+   + +L +
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVS 567

Query: 540 WNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
           W  MI+ +  +     A+ LF   R    EP+EIS VS+L AC+  G++  G
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEG 619



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 259/502 (51%), Gaps = 19/502 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+      + L   Y+N    + +  +F +   +  + WN ++    ++      +  F
Sbjct: 124 GFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  G+  DS T   +  + + +  +  G  +H   +K+G    +S+ N  V  Y K 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN 243

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++S+   F  M   D +SWN+I++G + N   EK L  F +M +SG + D  ++ S  
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF 303

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A  A    +S G+ +H  G+K  +  S      N+L+ MYS+CGD+++A+  F  M+ + 
Sbjct: 304 AGCADSRLISLGRAVHCFGVKACF--SREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS+ ++I G+A  G   EA  L  EM+    + PD+ TV  +++ CA + LL EG+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEME-EEGISPDVYTVTAVLNCCARNRLLDEGKRVH 420

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
            +     +G+D+ + N+LMD Y+K  S+ +AEL+F+ +  + D++SWN++I G  K    
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEM-RVKDIISWNTVIGGYSKNCYA 479

Query: 358 -------EMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                   +L +  +FS    T+  +LP+C S  + + G+ IH + ++ G+ ++    N+
Sbjct: 480 NEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L+ A  L   I+ + D   W ++I     +G  +EAI  F  M +Q    
Sbjct: 540 LVDMYAKCGALLLARLLFDDIT-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIE 597

Query: 469 PDSVTLVNVISACGNLELAFEG 490
           PD ++ V+++ AC +  L  EG
Sbjct: 598 PDEISFVSLLYACSHSGLVDEG 619



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 217/460 (47%), Gaps = 22/460 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        SL+  Y      +S+  +F E   +DV++WN++I   V N     GL  F
Sbjct: 225 GFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  GI  D  T++ + +       +  GR VHC  +KA    +   CN  ++MY+KC
Sbjct: 285 VQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKC 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL+S++  F  M     VS+ ++++G        + +  F EM   G   D  ++++ +
Sbjct: 345 GDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404

Query: 182 AASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
              A    L  GK +H   IK   +G++    + V+N+L+ MY++CG +  AE  F  M 
Sbjct: 405 NCCARNRLLDEGKRVHEW-IKENDMGFD----IFVSNALMDMYAKCGSMREAELVFSEMR 459

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++SWN +I G++ N    EA  L + + + +   PD  TV  ++  CA      +GR
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +HGY +R     D  + NSL+D Y+K  +L  A LLF+ I    DLVSW  MI+G    
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS-KDLVSWTVMIAGYGMH 578

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
                   LF +M     +    + +++L +C+    ++ G +  +  + +         
Sbjct: 579 GFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
              ++ M    G+L  A+  ++ +    D + W  ++  C
Sbjct: 639 YACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGC 678



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 160/364 (43%), Gaps = 62/364 (17%)

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  TL +V+  C + +   +GK +      +   LD+ + + L  MY  C D+K AS VF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGV 584
           +         WN +++  +++     ++ LF+ +     E +    S VS   + + L  
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS--KSFSSLRS 210

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISA 629
           +  G+Q+HG++   GF E + + ++L+  Y  N + ++A              W+S+I+ 
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL-------------- 675
           Y  +G   + + +F +M  SGI    ++++S+ + C+ S L+  G               
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330

Query: 676 -QYYNNMLEEYDVRPETEH-HVCIVDMLGRS-----------------GKLQEAYEFIKN 716
            ++ N +L+ Y    + +   V   +M GRS                 G+  + +E ++ 
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN----MYVALGR 772
             I P      A+L+ C+ +     GK+V E    ++  ++G+ I +SN    MY   G 
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHEW---IKENDMGFDIFVSNALMDMYAKCGS 447

Query: 773 WKDA 776
            ++A
Sbjct: 448 MREA 451


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 221/693 (31%), Positives = 357/693 (51%), Gaps = 36/693 (5%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY + G L  ++  F  +    T +WN ++ G          LL++ +M  +G   D  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
               V A   L  +  GK++H     +G ++  +V   +SLI +Y++ G +  A+  F  
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG--SSLIKLYAENGHLSDAQYLFDN 118

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD V WN +++G+  NG    A  +  EM+    ++P+  T   ++S+CA   +L  
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDL 177

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  +HG A+   L  D  + N+L+  YSK   L  A  LF+  +P +DLVSWN +ISG  
Sbjct: 178 GTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDT-SPQSDLVSWNGIISGYV 236

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF+ M+    +    T  + LP  N   SL+  K IH + ++     +  
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +AL+ +Y  C D+  A  +L + S + DT     +I     NG  +EA++ F+ + Q+
Sbjct: 297 LKSALIDIYFKCRDVEMAQKILCQ-SSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQE 355

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +   P SVT  ++  A   L     GK LHG  +K+ +     V +A++ MY +C  +  
Sbjct: 356 R-MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDL 414

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQ 581
           A  VF      +   WN MI++ SQN     A+ LFR +  E      VSI   LSAC  
Sbjct: 415 ACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACAN 474

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L +GK+IHG +     + + +  S+L+DMY+ C               ++  +W+S+
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSI 534

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           ISAYG HG   E + LFHEM  +GI+P   + + ++SAC H+G VDEG++YY+ M EEY 
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYG 594

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           +    EH+ C+ DM GR+G+L EA+E I ++P  P  GVWG +L AC  HG+ ++ +  +
Sbjct: 595 IPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVAS 654

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + LF L+P N GYY+ L+N+    G+W+  +++
Sbjct: 655 KHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 189/728 (25%), Positives = 331/728 (45%), Gaps = 48/728 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y      + +  LFY         WN MI            L F+ +M+  G+  D  T 
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             +V A   +  +K G++VH      G+  D  + +  + +YA+ G L+ ++  F  +  
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            D+V WN +++G + N      +  F EM  S  + ++V+ +  ++  A    L  G  +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 197 HALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           H + +  G E DSP   V N+L++MYS+C  ++AA + F      D+VSWN II G+  N
Sbjct: 182 HGIAVSCGLELDSP---VANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G   EA  L   M +   ++PD  T  + +    + L L+  + +HGY IR  +  D+ +
Sbjct: 239 GLMGEAEHLFRGM-ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC 363
            ++L+D Y K   +  A+ +    +   D V   +MISG             F+ ++   
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSF-DTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            + +  T  +I P+     +L  GK +H   +K          +A++ MY  CG L  A 
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +  RI+   D  CWN +I +C+QNG   EAI  F+ M   +    D V++   +SAC N
Sbjct: 417 RVFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQMG-MEGTRYDCVSISGALSACAN 474

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     GK +HGL +K  +  D   +++LI MY +C ++  +  VF+     N  +WN +
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSI 534

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           ISA+  +      L LF  +     +P+ ++ + I+SAC   G +  G +     +HL  
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIR----YYHLMT 590

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
           +E      A ++ Y+ C ++         +G  G+  EA E  + M      P      +
Sbjct: 591 EEYGI--PARMEHYA-CVAD--------MFGRAGRLDEAFETINSM---PFPPDAGVWGT 636

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYE---FIKN 716
           LL AC   G V+       ++   +D+ P  + ++V + ++   +GK ++  +    +K 
Sbjct: 637 LLGACHIHGNVELAEVASKHL---FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKE 693

Query: 717 LPIQPKPG 724
             ++  PG
Sbjct: 694 RGVRKVPG 701



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 255/553 (46%), Gaps = 22/553 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             +SL+  Y+   +   +  LF     KD V WN M+   V+N      +  F EM    
Sbjct: 95  VGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE 154

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ +S T   ++S       L  G  +H +++  G+  DS + N  + MY+KC  L ++ 
Sbjct: 155 IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAAR 214

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F     +D VSWN I+SG + N    +    FR M  +G + D+++ +S +     L 
Sbjct: 215 KLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELL 274

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L + K IH   I+  +     V + ++LI +Y +C D+E A++     +  D V    +
Sbjct: 275 SLKHCKEIHGYIIR--HAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTM 332

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+ LNGK +EA +    + +   ++P   T  ++    A    L  G+ +HG  I+  
Sbjct: 333 ISGYVLNGKNKEALEAFRWL-VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
           L     + ++++D Y+K   L  A  +FN I    D + WNSMI+             LF
Sbjct: 392 LDEKCHVGSAILDMYAKCGRLDLACRVFNRITE-KDAICWNSMITSCSQNGRPGEAINLF 450

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           ++M    +++   ++   L +C +  +L +GK IH   +K    ++    ++L+ MY  C
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L  +  +  R+   ++ S WN +I A   +G  +E +  F  M  +    PD VT + 
Sbjct: 511 GNLNFSRRVFDRMQERNEVS-WNSIISAYGNHGDLKECLALFHEML-RNGIQPDHVTFLG 568

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESCY 533
           +ISACG+     EG   + L  +   G+  R+++   +  M+GR   +  A  T+    +
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEY-GIPARMEHYACVADMFGRAGRLDEAFETINSMPF 627

Query: 534 NCNLCTWNCMISA 546
             +   W  ++ A
Sbjct: 628 PPDAGVWGTLLGA 640



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 219/460 (47%), Gaps = 17/460 (3%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P + +LL  YS     +++  LF  +   D+V+WN +I+  V+N  +    H F  M+  
Sbjct: 195 PVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISA 254

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI+ DS T    +  + ++  LK  + +H   I+  ++ D  L +  +++Y KC D+  +
Sbjct: 255 GIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMA 314

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +         DTV   T++SG + N   ++ L  FR +     +  +V+ SS   A A L
Sbjct: 315 QKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L+ GK +H   IK   ++  +V   ++++ MY++CG ++ A R F  +T KD + WN+
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVG--SAILDMYAKCGRLDLACRVFNRITEKDAICWNS 432

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   + NG+  EA +L  +M  M     D  ++   +S CA+   L  G+ +HG  I+ 
Sbjct: 433 MITSCSQNGRPGEAINLFRQMG-MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG 491

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GL 355
            L  DL   +SL+D Y+K  +L+ +  +F+ +   N+ VSWNS+IS             L
Sbjct: 492 PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNE-VSWNSIISAYGNHGDLKECLAL 550

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F EML    Q    T L I+ +C     ++ G +  H    + G          +  M+ 
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
             G L  AF  +  +    D   W  ++ AC  +G+ + A
Sbjct: 611 RAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELA 650



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   +SL+  Y+       S  +F     ++ V+WN++I+A   +  +   L  F EM+ 
Sbjct: 497 LYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLR 556

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            GI+ D  T L I+SA      + +G R  H ++ + G+ A         +M+ + G L+
Sbjct: 557 NGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLD 616

Query: 126 SSECTFSGM-HCADTVSWNTIMSGC-LHNN 153
            +  T + M    D   W T++  C +H N
Sbjct: 617 EAFETINSMPFPPDAGVWGTLLGACHIHGN 646


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 242/788 (30%), Positives = 403/788 (51%), Gaps = 82/788 (10%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + +   L  ++ +   ++ ++ G V+H  ++K G ++  SLC   +N+YAK G L+  
Sbjct: 34  GYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 93

Query: 128 ECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASA 185
              F  M   D V WN ++SG     ++  + +  FR M    E   N V+++  +   A
Sbjct: 94  NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 153

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
            L E   GK +H+  IK G E   +    N+LISMY++CG +   A  AF  +  KDVVS
Sbjct: 154 RLRE-DAGKSVHSYVIKSGLES--HTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS 210

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLREGRSVH 301
           WNA+I GF+ N   EEAF L H M L   ++P+ AT+ +++ +CA   ++   R G+ VH
Sbjct: 211 WNAVIAGFSENKFTEEAFKLFHAM-LKGPIQPNYATIASILPVCASLEENAGYRYGKEVH 269

Query: 302 GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
            + +RR+ L  D+ ++NSLM FY +   + KAE LF  +    DLVSWN++I+G      
Sbjct: 270 CHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKS-RDLVSWNAIIAGYASNGE 328

Query: 355 ------LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGV 406
                 LF E + L +    S TL+++LP+C    +L+  K IH + ++  G   +T   
Sbjct: 329 WLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVG 388

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+  Y  C    AA      IS   D   WN ++ A T++G     +     M  ++ 
Sbjct: 389 NALLSFYAKCNYTQAALQTFLMIS-RKDLISWNAILDAFTESGCETHLVNLLHWML-REG 446

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDT--RVQNALITMYGRCRDIK 523
             PDS+T++ +I     +    + K  H  +++  L+  D    + N ++  Y +C ++K
Sbjct: 447 IRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMK 506

Query: 524 SASTVFES------CYNCN--------------------------LCTWNCMISAFSQNK 551
            A  +F S         CN                          L TWN M+  +++N 
Sbjct: 507 YAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAEND 566

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              +AL LF  L+    +P+ ++I+SIL AC  +  +   +Q HG+V    F +   ++ 
Sbjct: 567 FPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVR-LNG 625

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           A +DMYS C               K    +++M+  +  HG G EA+ +F  M   G++P
Sbjct: 626 AFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKP 685

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
               + ++L ACSH+GLVDEG + +N++ + +  +P  E + C+VD+L R G++++AY F
Sbjct: 686 DHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTF 745

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +  +PI+    +WG +L AC  H + ++G+ VA+ LFK+E +N+G Y+ +SN+Y A  RW
Sbjct: 746 VTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARW 805

Query: 774 KDAVEIGK 781
              +EI +
Sbjct: 806 DGVMEIRR 813



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 297/647 (45%), Gaps = 64/647 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV---ENRCVVMGLHFFGEMVEEGI 69
           LL  Y+     +    LF E   +D V WN +++       +   VM L     MV E  
Sbjct: 80  LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA- 138

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSE 128
           + +S T+ I++    ++     G+ VH   IK+G+ + +   N  ++MYAKCG + + + 
Sbjct: 139 KPNSVTIAIVLPVCARLR-EDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 197

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+ +   D VSWN +++G   N + E+    F  M     Q +  +++S +   A L 
Sbjct: 198 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 257

Query: 189 E---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           E     YGK +H   ++   E    VSV NSL+S Y + G +E AE  F  M  +D+VSW
Sbjct: 258 ENAGYRYGKEVHCHVLRR-MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSW 316

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII G+A NG++ +A +L  E   + +++PD  T+V+++  CA    L+  + +HGY I
Sbjct: 317 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYII 376

Query: 306 RRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           R   L  D  + N+L+ FY+K N    A   F  I+   DL+SWN+++            
Sbjct: 377 RHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMIS-RKDLISWNAILDAFTESGCETHL 435

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NAL 409
             L   ML    +    T+L I+    +   ++  K  H + ++ G      G    N +
Sbjct: 436 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGM 495

Query: 410 MHMYINCGDLVAAFSLLQRISHN-------------------------------SDTSCW 438
           +  Y  CG++  A ++   +S                                 +D + W
Sbjct: 496 LDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTW 555

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N+++    +N    +A+  F  + Q Q   PD VT+++++ AC ++      +  HG  +
Sbjct: 556 NLMVRVYAENDFPDQALSLFHEL-QGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVI 614

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           ++    D R+  A I MY +C  +  A  +F S    +L  +  M+  F+ +     AL 
Sbjct: 615 RACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALR 673

Query: 559 LFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQ 601
           +F +   L  +P+ + I ++L AC+  G++  G +I   +  + GFQ
Sbjct: 674 IFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQ 720



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 216/482 (44%), Gaps = 51/482 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIR 70
           SL++ Y  +   E +  LF    ++D+V+WNA+I     N   +  L  F E +  E I+
Sbjct: 287 SLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 346

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            DS TL+ ++ A   ++ L+  + +H   I+  G+  D+S+ N  ++ YAKC    ++  
Sbjct: 347 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 406

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           TF  +   D +SWN I+     +      +     M   G + D++++ + +   A +  
Sbjct: 407 TFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSR 466

Query: 190 LSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-------- 240
           +   K  H+  I+ G  +     ++ N ++  Y++CG+++ A   F  ++ K        
Sbjct: 467 VKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNS 526

Query: 241 ------------------------DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
                                   D+ +WN ++  +A N   ++A  L HE+Q  + ++P
Sbjct: 527 MISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ-GQGMKP 585

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           DI T+++++  CA    +   R  HGY IR     D+ +  + +D YSK  S+  A  LF
Sbjct: 586 DIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLF 644

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
            + +P  DLV + +M+ G            +F  ML L  +     + A+L +C+    +
Sbjct: 645 LS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLV 703

Query: 385 EFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           + G  I     K+ GF         ++ +    G +  A++ + R+   ++ + W  ++ 
Sbjct: 704 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLG 763

Query: 444 AC 445
           AC
Sbjct: 764 AC 765



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 4/223 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  S+++ Y N S  + + A+F      D+ TWN M+    EN      L  F E+  +G
Sbjct: 523 TCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG 582

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D  T++ I+ A   M  +   R  H   I+A    D  L   F++MY+KCG +  + 
Sbjct: 583 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA-CFNDVRLNGAFIDMYSKCGSVFGAY 641

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      D V +  ++ G   +   E+ L  F  M   G + D+V +++ + A +  G
Sbjct: 642 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 701

Query: 189 ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
            +  G K+ +++    G++  P +     ++ + ++ G I+ A
Sbjct: 702 LVDEGWKIFNSIEKVHGFQ--PTMEQYACVVDLLARGGRIKDA 742


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 232/721 (32%), Positives = 374/721 (51%), Gaps = 39/721 (5%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
             L +G+ VH   I +  + +S  L    V MY KCG L  +E  F GM      +WN +
Sbjct: 92  KALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAM 151

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +   + N  P   L  +REM  SG   D  +    + A   L +  YG  +H L IK GY
Sbjct: 152 IGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGY 211

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDL 264
                V V NS++ MY++C D+  A + F  M  K DVVSWN++I  ++ NG+  EA  L
Sbjct: 212 --VSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRL 269

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
             EMQ   S+ P+  T V  +  C DS  +++G  +H   ++     ++ + N+L+  Y+
Sbjct: 270 FGEMQ-KASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA 328

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS-QF-----------SFSTLL 372
           +   + +A  +F  +    D +SWNSM+SG  +  LY  + QF               ++
Sbjct: 329 RFGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVI 387

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +I+ +     +   G  IH + +K G  ++    N+L+ MY     +     +  ++  +
Sbjct: 388 SIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-D 446

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  +I    QNG    A++ F+ + Q +    D + + +++ AC  L+L    K 
Sbjct: 447 KDVVSWTTIIAGHAQNGSHSRALELFREV-QLEGIDLDVMMISSILLACSGLKLISSVKE 505

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H   ++  +  D  +QN ++ +YG C ++  A+ +FE     ++ +W  MIS +  N  
Sbjct: 506 IHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 564

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              ALELF  ++    EP+ IS+VSILSA   L  L+ GK+IHG +   GF     ++S 
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 624

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+DMY+ C               K    W+SMI+AYG HG G  AI+LF  M +  I P 
Sbjct: 625 LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPD 684

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             + +++L ACSHSGL++EG ++  +M  EY + P  EH+ C+VD+LGR+  L+EAY+F+
Sbjct: 685 HIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFV 744

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           K + ++P   VW A+L AC  H + ++G+  A+ L +++PEN G Y+ +SN+Y A  RWK
Sbjct: 745 KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWK 804

Query: 775 D 775
           D
Sbjct: 805 D 805



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 180/598 (30%), Positives = 298/598 (49%), Gaps = 23/598 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST L+  Y        +  LF    +K + TWNAMI A V N   +  L  + EM   GI
Sbjct: 117 STRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGI 176

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D+ T   I+ A   +   + G  VH L+IK G ++   + N  V MY KC DLN +  
Sbjct: 177 PLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 236

Query: 130 TFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
            F  M    D VSWN+++S    N    + L  F EM  +    +  +  +A+ A     
Sbjct: 237 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 296

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G  IHA  +K  Y  +  V V N+LI+MY++ G +  A   F+ M   D +SWN++
Sbjct: 297 FIKQGMFIHATVLKSSYYIN--VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 354

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           + GF  NG + EA    HEM+     +PD+  V+++I+  A S     G  +H YA++  
Sbjct: 355 LSGFVQNGLYHEALQFYHEMRDA-GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNG 413

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  DL + NSL+D Y+K  S+   + +F+ + P  D+VSW ++I+G            LF
Sbjct: 414 LDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM-PDKDVVSWTTIIAGHAQNGSHSRALELF 472

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +E+           + +IL +C+  + +   K IH + ++ G S+  +  N ++ +Y  C
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQ-NGIVDVYGEC 531

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++  A  + + I    D   W  +I     NG   EA++ F  M ++    PDS++LV+
Sbjct: 532 GNVDYAARMFELIEFK-DVVSWTSMISCYVHNGLANEALELFHLM-KETGVEPDSISLVS 589

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++SA  +L    +GK +HG  ++    L+  + + L+ MY RC  ++ +  VF    N +
Sbjct: 590 ILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKD 649

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
           L  W  MI+A+  +     A++LFR +E E   P+ I+ V++L AC+  G++  G++ 
Sbjct: 650 LVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRF 707



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 256/505 (50%), Gaps = 20/505 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           G+++ +  + S++  Y+  +    +  LF     K DVV+WN+MI+A   N   +  L  
Sbjct: 210 GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRL 269

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEM +  +  ++ T +  + A    + +KQG  +H   +K+    +  + N  + MYA+
Sbjct: 270 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 329

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G +  +   F  M   DT+SWN+++SG + N    + L ++ EM  +G++ D V++ S 
Sbjct: 330 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 389

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AASA  G   +G  IHA  +K G +    + V NSL+ MY++   ++  +  F  M  K
Sbjct: 390 IAASARSGNTLHGMQIHAYAMKNGLDSD--LQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 447

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW  II G A NG    A +L  E+QL   ++ D+  + +++  C+   L+   + +
Sbjct: 448 DVVSWTTIIAGHAQNGSHSRALELFREVQL-EGIDLDVMMISSILLACSGLKLISSVKEI 506

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y IR+ L  DL++ N ++D Y +  ++  A  +F  I    D+VSW SMIS     GL
Sbjct: 507 HSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIE-FKDVVSWTSMISCYVHNGL 564

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             E L L      +       +L++IL +  S  +L+ GK IH + ++ GF       + 
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 624

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  + ++   I  N D   W  +I A   +G  + AI  F+ M + ++ +
Sbjct: 625 LVDMYARCGTLEKSRNVFNFI-RNKDLVLWTSMINAYGMHGCGRAAIDLFRRM-EDESIA 682

Query: 469 PDSVTLVNVISACGNLELAFEGKSL 493
           PD +  V V+ AC +  L  EG+  
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRF 707



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 239/513 (46%), Gaps = 48/513 (9%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF-YSKSNSLSKAELLFNAIAP 341
           +++ LC     L EG+ VH + I     ++ + +++ + F Y K   L  AE LF+ + P
Sbjct: 83  SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM-P 141

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
              + +WN+MI              L++EM          T   IL +C   +   +G  
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAE 201

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H   +K G+ +     N+++ MY  C DL  A  L  R+    D   WN +I A + NG
Sbjct: 202 VHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG 261

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
              EA++ F  M Q+ + +P++ T V  + AC +     +G  +H   LKS   ++  V 
Sbjct: 262 QSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FE 566
           NALI MY R   +  A+ +F +  + +  +WN M+S F QN     AL+ +  +     +
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS--------NC- 617
           P+ ++++SI++A  + G   HG QIH +    G   +  + ++L+DMY+        +C 
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 440

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 K   +W+++I+ +  +G    A+ELF E+   GI      + S+L ACS     
Sbjct: 441 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS----- 495

Query: 672 DEGLQYYNNMLE--EYDVRPETEHHVC---IVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
             GL+  +++ E   Y +R      V    IVD+ G  G +  A    + +  +     W
Sbjct: 496 --GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-W 552

Query: 727 GAMLSACSHHGDTKMGKQVAELLFK--LEPENV 757
            +M+S   H+G      ++  L+ +  +EP+++
Sbjct: 553 TSMISCYVHNGLANEALELFHLMKETGVEPDSI 585



 Score = 43.1 bits (100), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 43/93 (46%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF+     +++L+  Y+     E S  +F    NKD+V W +MI A   + C    +  
Sbjct: 613 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 672

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           F  M +E I  D    + ++ A +    + +GR
Sbjct: 673 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGR 705


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 237/724 (32%), Positives = 378/724 (52%), Gaps = 41/724 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           L +G+ VH   I +  + +S  L    V MY KCG L  +E  F GM      +WN ++ 
Sbjct: 130 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 189

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
             + N  P   L  +REM  SG   D  +    + A   L +   G  +H L IK GY  
Sbjct: 190 AYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGY-- 247

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLH 266
              V V NS++ MY++C D+  A + F  M  K DVVSWN++I  ++ NG+  EA  L  
Sbjct: 248 VSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFG 307

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           EMQ   S+ P+  T V  +  C DS  +++G  +H   ++     ++ + N+L+  Y++ 
Sbjct: 308 EMQ-KASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARF 366

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS-QF--------SFSTLLAIL-- 375
             + +A  +F  +    D +SWNSM+SG  +  LY  + QF            L+A++  
Sbjct: 367 GKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 425

Query: 376 --PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
              S  S  +L  G  IH + +K G  ++    N+L+ MY     +     +  ++  + 
Sbjct: 426 IAASARSGNTLN-GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP-DK 483

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   W  +I    QNG    A++ F+ + Q +    D + + +++ AC  L+L    K +
Sbjct: 484 DVVSWTTIIAGHAQNGSHSRALELFREV-QLEGIDLDVMMISSILLACSGLKLISSVKEI 542

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   ++  +  D  +QN ++ +YG C ++  A+ +FE     ++ +W  MIS +  N   
Sbjct: 543 HSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLA 601

Query: 554 VRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             ALELF  ++    EP+ IS+VSILSA   L  L+ GK+IHG +   GF     ++S L
Sbjct: 602 NEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTL 661

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               K    W+SMI+AYG HG G  AI+LF  M +  I P  
Sbjct: 662 VDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDH 721

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + +++L ACSHSGL++EG ++  +M  EY + P  EH+VC+VD+LGR+  L+EAY+F+K
Sbjct: 722 IAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVK 781

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            + ++P   VW A+L AC  H + ++G+  A+ L +++PEN G Y+ +SN+Y A  RWKD
Sbjct: 782 GMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKD 841

Query: 776 AVEI 779
             E+
Sbjct: 842 VEEV 845



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 255/505 (50%), Gaps = 20/505 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           G+++ +  + S++  Y+  +    +  LF     K DVV+WN+MI+A   N   +  L  
Sbjct: 246 GYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRL 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEM +  +  ++ T +  + A    + +KQG  +H   +K+    +  + N  + MYA+
Sbjct: 306 FGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYAR 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G +  +   F  M   DT+SWN+++SG + N    + L ++ EM  +G++ D V++ S 
Sbjct: 366 FGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AASA  G    G  IHA  +K G +    + V NSL+ MY++   ++  +  F  M  K
Sbjct: 426 IAASARSGNTLNGMQIHAYAMKNGLDSD--LQVGNSLVDMYAKFCSMKYMDCIFDKMPDK 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW  II G A NG    A +L  E+QL   ++ D+  + +++  C+   L+   + +
Sbjct: 484 DVVSWTTIIAGHAQNGSHSRALELFREVQL-EGIDLDVMMISSILLACSGLKLISSVKEI 542

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H Y IR+ L  DL++ N ++D Y +  ++  A  +F  I    D+VSW SMIS     GL
Sbjct: 543 HSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIE-FKDVVSWTSMISCYVHNGL 600

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             E L L      +       +L++IL +  S  +L+ GK IH + ++ GF       + 
Sbjct: 601 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 660

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  + ++   I  N D   W  +I A   +G  + AI  F+ M + ++ +
Sbjct: 661 LVDMYARCGTLEKSRNVFNFI-RNKDLVLWTSMINAYGMHGCGRAAIDLFRRM-EDESIA 718

Query: 469 PDSVTLVNVISACGNLELAFEGKSL 493
           PD +  V V+ AC +  L  EG+  
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRF 743



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 238/513 (46%), Gaps = 48/513 (9%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF-YSKSNSLSKAELLFNAIAP 341
           +++ LC     L EG+ VH + I     ++ + +++ + F Y K   L  AE LF+ + P
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM-P 177

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
              + +WN+MI              L++EM          T   IL +C   +    G  
Sbjct: 178 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAE 237

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H   +K G+ +     N+++ MY  C DL  A  L  R+    D   WN +I A + NG
Sbjct: 238 VHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG 297

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
              EA++ F  M Q+ + +P++ T V  + AC +     +G  +H   LKS   ++  V 
Sbjct: 298 QSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FE 566
           NALI MY R   +  A+ +F +  + +  +WN M+S F QN     AL+ +  +     +
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS--------NC- 617
           P+ ++++SI++A  + G   +G QIH +    G   +  + ++L+DMY+        +C 
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 476

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 K   +W+++I+ +  +G    A+ELF E+   GI      + S+L ACS     
Sbjct: 477 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS----- 531

Query: 672 DEGLQYYNNMLE--EYDVRPETEHHVC---IVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
             GL+  +++ E   Y +R      V    IVD+ G  G +  A    + +  +     W
Sbjct: 532 --GLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-W 588

Query: 727 GAMLSACSHHGDTKMGKQVAELLFK--LEPENV 757
            +M+S   H+G      ++  L+ +  +EP+++
Sbjct: 589 TSMISCYVHNGLANEALELFHLMKETGVEPDSI 621



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 43/93 (46%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF+     +++L+  Y+     E S  +F    NKD+V W +MI A   + C    +  
Sbjct: 649 KGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDL 708

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           F  M +E I  D    + ++ A +    + +GR
Sbjct: 709 FRRMEDESIAPDHIAFVAVLYACSHSGLMNEGR 741


>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
 gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
          Length = 849

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 229/768 (29%), Positives = 387/768 (50%), Gaps = 49/768 (6%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +  ++ +V W +M+TA V++  V     FF  M  EG+  D  T + I++A      
Sbjct: 85  VFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNAC---ES 141

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QG +VH L I   + +D  + N  + M AKC DL+ +   F  M   D +SW  +++ 
Sbjct: 142 LAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTA 201

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGELSYGKVIHALGIKLGYE 206
              N +  +   Y+  M   G   +N++  + +AA  SA   EL YG V+ A       E
Sbjct: 202 YARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAELVYGNVVEA-------E 254

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
                 V N+ I+M+S+CG ++ A   F  M   DV SWNA++   A +G   EA +L  
Sbjct: 255 WESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFR 314

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            M     V  D  T+V  +S CA    L +G+S+H    R  L  D++   +L+  YS+ 
Sbjct: 315 RMP--SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRC 372

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCSQFSFSTLLA 373
             L +A  +F+ I   N +VSWN+MI+              +F+ ML    + + +T L 
Sbjct: 373 GDLGEARRVFDGILGKN-VVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALN 431

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           ++ +    E    GK +H W +  G  +++   +AL++MY   G L  A  + ++I    
Sbjct: 432 VVSAV---ECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIER- 487

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN ++  C  +G  +EA++ F  M  +  AS +  T +  +SA     + + G+ L
Sbjct: 488 DVFAWNAIVGVCVGHGQPREALEWFSRMLLE-GASGNRATFLLALSAVSPDRVCY-GRRL 545

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HGL  +S +  D  V NALI+MY RC+ ++ A   F+   + ++ +W  +I+A     + 
Sbjct: 546 HGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSC 605

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
             A++LF+ +E EP+ ++  ++L ACT +   R GK +H     LG + N F+++AL+ M
Sbjct: 606 QEAIDLFQRMELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHM 665

Query: 614 YSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           +S                  + A W++M+  Y   G     I+ FH M   G+ P   + 
Sbjct: 666 HSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITF 725

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           ++++SACSH+GLV++G + + +M  +Y V    E + C++D+L R+G+L+EAY+F++ +P
Sbjct: 726 LAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMP 785

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
             P    W  +L+AC   GD + G   A  + + EP     ++ LSNM
Sbjct: 786 CGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSNM 833



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 273/583 (46%), Gaps = 31/583 (5%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            + +   F     +DV++W  M+TA   N  +     ++  M+ EG+  ++ T L +++A
Sbjct: 177 LDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAA 236

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            +     +   +V+   ++A   +D+ + N  +NM++KCG L+ +   F  M   D  SW
Sbjct: 237 CSSA---RDAELVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSW 293

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N +++    + +  + L  FR M  S    D  +L  A++  A    L  GK IH+   +
Sbjct: 294 NAMVAALAQHGFSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVAR 352

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LG E    V    +L++MYS+CGD+  A R F G+  K+VVSWN +I  +  +       
Sbjct: 353 LGLETD--VVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRA 410

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
             +  + L+  V P   T + ++S      +   G+ +HG+ +   L  D  + ++L++ 
Sbjct: 411 LEIFRLMLLDGVRPTRTTALNVVSAVECQSV---GKQLHGWIVDTGLYSDSFIGSALVNM 467

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFST 370
           Y ++ SL  A  +F  I    D+ +WN+++               F  ML   +  + +T
Sbjct: 468 YERTGSLGDARRVFEKIIE-RDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRAT 526

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
            L  L S  SP+ + +G+ +H    + G   +    NAL+ MY  C  L  A +   R+ 
Sbjct: 527 FLLAL-SAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLE 585

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             S  S W  VI AC   G  QEAI  F+ M  +    PD VT   V+ AC  +    EG
Sbjct: 586 DKSIVS-WTSVIAACVDLGSCQEAIDLFQRMELE----PDRVTFTTVLEACTIVSAHREG 640

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H  A +  +  +  V  ALI M+ +  ++  A  +FE+     L  WN M+  ++Q 
Sbjct: 641 KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQT 700

Query: 551 KAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
                 ++ F  ++     P+ I+ ++++SAC+  G++  G +
Sbjct: 701 GHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGAR 743



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 183/718 (25%), Positives = 325/718 (45%), Gaps = 49/718 (6%)

Query: 52  RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC 111
           RC  + L       +  +  D +  L +V+   +   L +   V+      G++ D    
Sbjct: 7   RCFTLQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFG 66

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
              V M+ KC  ++ +   F  M     V W ++++  + +   ++  L+F  M   G  
Sbjct: 67  ASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVL 126

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D V+  S + A   L +   G+++H L I    E    V + N+L+ M ++C D++ A 
Sbjct: 127 PDRVTFISILNACESLAQ---GELVHRLIIDKNLESD--VVIGNALMKMLAKCYDLDGAA 181

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M  +DV+SW  ++  +A NG   EAF     M L+  V P+  T + +++ C+ +
Sbjct: 182 RFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRM-LLEGVVPNNITFLAVLAACSSA 240

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              R+   V+G  +      D ++ N+ ++ +SK   L +A  +F+ +    D+ SWN+M
Sbjct: 241 ---RDAELVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRW-DVKSWNAM 296

Query: 352 ISGLFK-----EMLYLCSQF------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           ++ L +     E L L  +         +TL+  L +C +PESLE GKSIH    +LG  
Sbjct: 297 VAALAQHGFSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLE 356

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFK 459
            + +   AL+ MY  CGDL  A  +   I   +  S WN +I A  ++      A++ F+
Sbjct: 357 TDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVS-WNNMIAAYGRDESLHSRALEIFR 415

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M       P   T +NV+SA   +E    GK LHG  + + +  D+ + +AL+ MY R 
Sbjct: 416 LML-LDGVRPTRTTALNVVSA---VECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERT 471

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
             +  A  VFE     ++  WN ++     +     ALE F  +  E    +  + L A 
Sbjct: 472 GSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLAL 531

Query: 580 TQLGVLR--HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           + +   R  +G+++HG +   G + ++ +++AL+ MY+ C               KS  +
Sbjct: 532 SAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVS 591

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+S+I+A    G   EAI+LF  M    + P + +  ++L AC+      EG +  ++  
Sbjct: 592 WTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREG-KLVHSRA 647

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
            E  +         ++ M  + G L EA    + +   P    W AML   +  G ++
Sbjct: 648 RELGLESNVFVATALIHMHSKFGNLGEARRIFEAVE-APTLACWNAMLGGYAQTGHSQ 704



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 258/586 (44%), Gaps = 59/586 (10%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           +S     + +  +F+     DV +WNAM+ A  ++      L  F  M  E +  D TTL
Sbjct: 269 FSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE-VAVDKTTL 327

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           +I +S       L+ G+ +H    + G+  D       V MY++CGDL  +   F G+  
Sbjct: 328 VIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILG 387

Query: 137 ADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
            + VSWN +++    + +   + L  FR M   G +    +  + V+A  C    S GK 
Sbjct: 388 KNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVEC---QSVGKQ 444

Query: 196 IHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           +H   +  G Y DS    + ++L++MY + G +  A R F  +  +DV +WNAI+     
Sbjct: 445 LHGWIVDTGLYSDS---FIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVG 501

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           +G+  EA +    M L+     + AT +  +S  +   +   GR +HG      L  D  
Sbjct: 502 HGQPREALEWFSRM-LLEGASGNRATFLLALSAVSPDRVC-YGRRLHGLIAESGLEADNN 559

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           + N+L+  Y++  SL  A   F+ +     +VSW S+I+             LF+ M   
Sbjct: 560 VANALISMYARCKSLEDARNTFDRLED-KSIVSWTSVIAACVDLGSCQEAIDLFQRMELE 618

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             + +F+T   +L +C    +   GK +H    +LG  +N     AL+HM+   G+L  A
Sbjct: 619 PDRVTFTT---VLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEA 675

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             + + +   +  +CWN ++    Q GH Q  I  F +M QQ+  +PD +T + V+SAC 
Sbjct: 676 RRIFEAVEAPT-LACWNAMLGGYAQTGHSQSVIDFFHAM-QQRGVAPDHITFLAVVSACS 733

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +  L  +G                R   ++ T YG                   L  + C
Sbjct: 734 HAGLVEKG---------------ARTFASMGTDYG---------------VGHGLEDYGC 763

Query: 543 MISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
           +I   ++      A +  + +   P++++  ++L+AC   G +R G
Sbjct: 764 LIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAACKIQGDVRRG 809



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 214/482 (44%), Gaps = 33/482 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV-VMGLHF 60
           G    +   T+L+T YS       +  +F     K+VV+WN MI A   +  +    L  
Sbjct: 354 GLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEI 413

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ +G+R   TT L +VSA+    C   G+ +H   +  G+ +DS + +  VNMY +
Sbjct: 414 FRLMLLDGVRPTRTTALNVVSAV---ECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYER 470

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSL 177
            G L  +   F  +   D  +WN I+  C+ +  P + L +F  M   G SG +A  +  
Sbjct: 471 TGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLA 530

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            SAV+       + YG+ +H L  + G E     +V N+LISMY++C  +E A   F  +
Sbjct: 531 LSAVSPD----RVCYGRRLHGLIAESGLEADN--NVANALISMYARCKSLEDARNTFDRL 584

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K +VSW ++I      G  +EA DL   M+L    EPD  T  T++  C      REG
Sbjct: 585 EDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL----EPDRVTFTTVLEACTIVSAHREG 640

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISG-- 354
           + VH  A    L  ++ +  +L+  +SK  +L +A  +F A+ AP   L  WN+M+ G  
Sbjct: 641 KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPT--LACWNAMLGGYA 698

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
                      F  M          T LA++ +C+    +E G ++        G  +  
Sbjct: 699 QTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGL 758

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                L+ +    G L  A+  LQ +        W  ++ AC   G  +      +S+ +
Sbjct: 759 EDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIE 818

Query: 464 QQ 465
           ++
Sbjct: 819 RE 820



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 149/330 (45%), Gaps = 32/330 (9%)

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           ++ T Q + S D    + +++ C   +L  E  S++       + LD     +++ M+ +
Sbjct: 16  RAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIK 75

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSI 575
           CR I  AS VFE   + ++  W  M++AF  ++   RA   F  ++ E   P+ ++ +SI
Sbjct: 76  CRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISI 135

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           L+AC  L     G+ +H  +     + +  I +AL+ M + C               +  
Sbjct: 136 LNACESLA---QGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDV 192

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +W+ M++AY  +G   EA   +  M   G+ P   + +++L+ACS +   D  L Y N 
Sbjct: 193 ISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSAR--DAELVYGNV 250

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           +  E++   +T      ++M  + G L  A +    +  +     W AM++A + HG + 
Sbjct: 251 VEAEWE--SDTMVANASINMFSKCGCLDRARDVFHRMK-RWDVKSWNAMVAALAQHGFSS 307

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVAL 770
              +    LF+  P  V   +  + + +AL
Sbjct: 308 EALE----LFRRMPSEVA--VDKTTLVIAL 331


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 228/748 (30%), Positives = 383/748 (51%), Gaps = 46/748 (6%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS---SLCNVFVNMYAKCGDLNSSEC 129
           +  LL ++        L  G  +H  ++ +G ++D    +L    + MY        +  
Sbjct: 32  ADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVA 91

Query: 130 TFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAA 183
            FS +     A ++ WN ++ G          +L++ +M WS   A   D  +L   V +
Sbjct: 92  VFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKM-WSHPAAPSPDAHTLPYVVKS 150

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A LG +S G+++H     +G  +  YV   ++L+ MY+  G +  A  AF G+  +D V
Sbjct: 151 CAALGAMSLGRLVHRTARAIGLANDVYVG--SALVKMYADAGLLGNARDAFDGIPERDCV 208

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WN ++DG    G  + A  L   M+     EP+ AT+   +S+CA    L  G  +H  
Sbjct: 209 LWNVMMDGCIKAGDVDGAVRLFRNMR-ASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A++  L  ++ + N+L+  Y+K   L  A  LF  + P +DLV+WN MISG         
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFE-LMPQDDLVTWNGMISGCVQNGLFVE 326

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF +M    ++    TL+++LP+      L+ GK +H + ++   + +   V+AL+ 
Sbjct: 327 AFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVD 386

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  C D+  A +L    +   D    + +I     NG  +EA++ F+ + +Q    P++
Sbjct: 387 IYFKCRDVRMAQNLYD-AARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ-CIKPNA 444

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT+ +V+  C ++     G+ +HG  L++       V++AL+ MY +C  +  +  +F  
Sbjct: 445 VTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLK 504

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHG 588
               +  TWN MIS+FSQN     AL+LFR +  E    N I+I + LSAC  L  + +G
Sbjct: 505 MSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYG 564

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K+IHG       + + F  SAL+DMY+ C               K+  +W+S+ISAYG H
Sbjct: 565 KEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAH 624

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   E++ L H M   G +P   + ++L+SAC+H+GLV+EG+Q +  M ++Y + P  EH
Sbjct: 625 GLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEH 684

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
             C+VD+  RSGKL +A +FI ++P +P  G+WGA+L AC  H + ++    ++ LFKL+
Sbjct: 685 FACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLD 744

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P N GYY+ +SN+    GRW    ++ +
Sbjct: 745 PANSGYYVLMSNINAVAGRWDGVSKVRR 772



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 197/683 (28%), Positives = 336/683 (49%), Gaps = 50/683 (7%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALF---YETCNKDVVTWNAMI---TACVENRCVVMGLH 59
           HL   T LL  Y     F  ++A+F           + WN +I   TA  ++   V+   
Sbjct: 69  HLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVL--- 125

Query: 60  FFGEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           F+ +M         D+ TL  +V +   +  +  GR+VH  +   G+  D  + +  V M
Sbjct: 126 FYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKM 185

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA  G L ++   F G+   D V WN +M GC+     +  +  FR M  SG + +  +L
Sbjct: 186 YADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATL 245

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +  ++  A   +L  G  +H+L +K G E  P V+V N+L++MY++C  ++ A R F  M
Sbjct: 246 ACFLSVCATDADLLSGAQLHSLAVKCGLE--PEVAVANTLLAMYAKCQCLDDAWRLFELM 303

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              D+V+WN +I G   NG F EAF L ++MQ      PD  T+V+L+    D   L++G
Sbjct: 304 PQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ-RSGARPDSITLVSLLPALTDLNGLKQG 362

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           + VHGY +R  +  D+ ++++L+D Y K   +  A+ L++A A   D+V  ++MISG   
Sbjct: 363 KEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDA-ARAIDVVIGSTMISGYVL 421

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +F+ +L  C + +  T+ ++LP C S  +L  G+ IH + L+  +      
Sbjct: 422 NGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYV 481

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +ALM MY  CG L  +  +  ++S   D   WN +I + +QNG  QEA+  F+ M   +
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFLKMSQK-DEVTWNSMISSFSQNGKPQEALDLFRQMC-ME 539

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
               +++T+   +SAC +L   + GK +HG+ +K  +  D   ++ALI MY +C +++ A
Sbjct: 540 GIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELA 599

Query: 526 STVFESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQL 582
             VFE   + N  +WN +ISA+  +   K  V  L   +   ++P+ ++ ++++SAC   
Sbjct: 600 LRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHA 659

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G Q+        FQ        +   Y        ++ M+  Y   GK  +AI+ 
Sbjct: 660 GLVEEGVQL--------FQ-------CMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQF 704

Query: 643 FHEMCNSGIRPTKSSVISLLSAC 665
             +M     +P      +LL AC
Sbjct: 705 IADM---PFKPDAGIWGALLHAC 724



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 272/570 (47%), Gaps = 26/570 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y++     ++   F     +D V WN M+  C++   V   +  F  M   G  
Sbjct: 180 SALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCE 239

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S       L  G  +H L++K G+  + ++ N  + MYAKC  L+ +   
Sbjct: 240 PNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRL 299

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D V+WN ++SGC+ N    +    F +M  SG + D+++L S + A   L  L
Sbjct: 300 FELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGL 359

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   ++        V + ++L+ +Y +C D+  A+  +      DVV  + +I 
Sbjct: 360 KQGKEVHGYIVRNCVNMD--VFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMIS 417

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+ LNG  EEA  +   + L + ++P+  T+ +++  CA    L  G+ +HGY +R    
Sbjct: 418 GYVLNGMSEEALQMFRYL-LEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYE 476

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               + ++LMD Y+K   L  +  +F  ++   D V+WNSMIS             LF++
Sbjct: 477 RKCYVESALMDMYAKCGRLDLSHYIFLKMS-QKDEVTWNSMISSFSQNGKPQEALDLFRQ 535

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +++  T+ A L +C S  ++ +GK IH   +K     +    +AL+ MY  CG+
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  + + +   ++ S WN +I A   +G  +E++     M Q++   PD VT + +I
Sbjct: 596 LELALRVFEFMPDKNEVS-WNSIISAYGAHGLVKESVSLLHGM-QEEGYKPDHVTFLALI 653

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI-KSASTVFESCYNC 535
           SAC +  L  EG  L     K  + +  R+++   ++ +Y R   + K+   + +  +  
Sbjct: 654 SACAHAGLVEEGVQLFQCMTKKYL-IAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKP 712

Query: 536 NLCTWNCMISAFSQNK----AEVRALELFR 561
           +   W  ++ A   ++    A++ + ELF+
Sbjct: 713 DAGIWGALLHACRVHRNVELADIASQELFK 742



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 222/457 (48%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  + +LL  Y+     + +  LF      D+VTWN MI+ CV+N   V     F
Sbjct: 272 GLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLF 331

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G R DS TL+ ++ ALT +N LKQG+ VH   ++  +  D  L +  V++Y KC
Sbjct: 332 YDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKC 391

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+  ++  +      D V  +T++SG + N   E+ L  FR +     + + V+++S +
Sbjct: 392 RDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVL 451

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A +  L  G+ IH   ++  YE   YV   ++L+ MY++CG ++ +   F  M+ KD
Sbjct: 452 PGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLKMSQKD 509

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I  F+ NGK +EA DL  +M  M  ++ +  T+   +S CA    +  G+ +H
Sbjct: 510 EVTWNSMISSFSQNGKPQEALDLFRQM-CMEGIKYNNITISAALSACASLPAIYYGKEIH 568

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  I+  +  D+   ++L+D Y+K  +L  A  +F  +   N+ VSWNS+IS     GL 
Sbjct: 569 GVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNE-VSWNSIISAYGAHGLV 627

Query: 357 KEMLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
           KE + L         +    T LA++ +C     +E G  +  C   K   +        
Sbjct: 628 KESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFAC 687

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +Y   G L  A   +  +    D   W  ++ AC
Sbjct: 688 MVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHAC 724



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 145/342 (42%), Gaps = 26/342 (7%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGVNA-LMHMYI---NCGDLV 420
           S   LLA+L  C S   L  G  IH   +  G    +N + ++  L+ MY+      D V
Sbjct: 31  SADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAV 90

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA-SPDSVTLVNVIS 479
           A FS L R +  S    WN +I   T  G    A+  +  M     A SPD+ TL  V+ 
Sbjct: 91  AVFSALPRAAAASSLP-WNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVK 149

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           +C  L     G+ +H  A    +  D  V +AL+ MY     + +A   F+     +   
Sbjct: 150 SCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVL 209

Query: 540 WNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN M+    +      A+ LFR++     EPN  ++   LS C     L  G Q+H    
Sbjct: 210 WNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV 269

Query: 597 HLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIE 641
             G +    +++ LL MY+ C+                   W+ MIS    +G   EA  
Sbjct: 270 KCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFG 329

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           LF++M  SG RP   +++SLL A +    + +G + +  ++ 
Sbjct: 330 LFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVR 371


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 246/807 (30%), Positives = 397/807 (49%), Gaps = 49/807 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + SLL+ YSN      +  LF      DVV+ N MI+   ++R     L FF +M   G 
Sbjct: 87  TKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGF 146

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  +   ++SA + +       +V C +IK G      + +  +++++K      +  
Sbjct: 147 EANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYK 206

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F     A+   WNTI++G L N         F EM    ++ D+ + SS +AA A L +
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L +GKV+ A  IK G ED   V V  +++ +Y++CG +  A   F  +    VVSW  ++
Sbjct: 267 LRFGKVVQARVIKCGAED---VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323

Query: 250 DGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
            G+    K  +AF  L   + MR   VE +  TV ++IS C    ++ E   VH +  + 
Sbjct: 324 SGYT---KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D  +  +L+  YSKS  +  +E +F  +  +      N MI+             L
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRL 440

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F  ML       +FS  +LL++L      + L  GK +H + LK G   +    ++L  +
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVL------DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTL 494

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  ++ L Q I    D +CW  +I    + G+ +EAI  F  M      SPD  
Sbjct: 495 YSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYLREAIGLFSEMLDD-GTSPDES 552

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL  V++ C +      GK +HG  L++ +     + +AL+ MY +C  +K A  V++  
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
              +  + + +IS +SQ+        LFR +    F  +  +I SIL A         G 
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSN-------CKSNA--------AWSSMISAYGYHG 634
           Q+H ++  +G      + S+LL MYS        CK+ +        AW+++I++Y  HG
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           K  EA+++++ M   G +P K + + +LSACSH GLV+E   + N+M+++Y + PE  H+
Sbjct: 733 KANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHY 792

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           VC+VD LGRSG+L+EA  FI N+ I+P   VWG +L+AC  HG+ ++GK  A+   +LEP
Sbjct: 793 VCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
            + G YISLSN+   +G W +  E  K
Sbjct: 853 SDAGAYISLSNILAEVGEWDEVEETRK 879



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 210/751 (27%), Positives = 352/751 (46%), Gaps = 58/751 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  +    ++L+  +S    FE +  +F ++ + +V  WN +I   + N+        F
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM     + DS T   +++A   +  L+ G+VV    IK G   D  +C   V++YAKC
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKC 298

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS +     VSW  ++SG   +N     L  F+EM  SG + +N +++S +
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358

Query: 182 AASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--- 237
           +A      +     +HA   K G Y DS   SV  +LISMYS+ GDI+ +E+ F  +   
Sbjct: 359 SACGRPSMVCEASQVHAWVFKSGFYLDS---SVAAALISMYSKSGDIDLSEQVFEDLDDI 415

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +++V  N +I  F+ + K  +A  L   M L   +  D  +V +L+S+  D L L  G
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLLSVL-DCLNL--G 469

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           + VHGY ++  L  DL + +SL   YSK  SL ++  LF  I P  D   W SMIS    
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI-PFKDNACWASMISGFNE 528

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GLF EML   +    STL A+L  C+S  SL  GK IH + L+ G       
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL++MY  CG L  A  +  R+      SC ++ I   +Q+G  Q+    F+ M    
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL-ISGYSQHGLIQDGFLLFRDMV-MS 646

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             + DS  + +++ A    + +  G  +H    K  +  +  V ++L+TMY +   I   
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
              F      +L  W  +I++++Q+     AL+++  ++   F+P++++ V +LSAC+  
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-- 764

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
               HG  +    FHL    NS +       Y     N  +  M+ A G  G+  EA   
Sbjct: 765 ----HGGLVEESYFHL----NSMVKD-----YGIEPENRHYVCMVDALGRSGRLREAESF 811

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDML 701
            + M    I+P      +LL+AC   G V+ G       +E   + P +   ++ + ++L
Sbjct: 812 INNM---HIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE---LEPSDAGAYISLSNIL 865

Query: 702 GRSG---KLQEAYEFIKNLPIQPKPGVWGAM 729
              G   +++E  + +K   +Q +PG W ++
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPG-WSSV 895



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 161/565 (28%), Positives = 265/565 (46%), Gaps = 45/565 (7%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V +T SL+S YS  G +  A + F  +   DVVS N +I G+  +  FEE+     +M  
Sbjct: 84  VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143

Query: 271 MRSVEPDIATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +   E +  +  ++IS C+   + L  E    H   I+    +  ++ ++L+D +SK+  
Sbjct: 144 L-GFEANEISYGSVISACSALQAPLFSELVCCH--TIKMGYFFYEVVESALIDVFSKNLR 200

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
              A  +F      N +  WN++I+G            LF EM     +    T  ++L 
Sbjct: 201 FEDAYKVFRDSLSAN-VYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C S E L FGK +    +K G + +     A++ +Y  CG +  A  +  RI + S  S
Sbjct: 260 ACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W +++   T++     A++ FK M +      ++ T+ +VISACG   +  E   +H  
Sbjct: 319 -WTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW-NCMISAFSQNKAEVR 555
             KS   LD+ V  ALI+MY +  DI  +  VFE   +       N MI++FSQ+K   +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK 436

Query: 556 ALELF-RHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A+ LF R L+     +E S+ S+LS    L  L  GKQ+HG+    G   +  + S+L  
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           +YS C               K NA W+SMIS +  +G   EAI LF EM + G  P +S+
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           + ++L+ CS    +  G + +   L    +    +    +V+M  + G L+ A +    L
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMG 742
           P +  P    +++S  S HG  + G
Sbjct: 613 P-ELDPVSCSSLISGYSQHGLIQDG 636



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 228/478 (47%), Gaps = 45/478 (9%)

Query: 294 LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           LR  + +  + +RR LL +D+ +  SL+ +YS S S++ A  LF+ I P  D+VS N MI
Sbjct: 64  LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTI-PQPDVVSCNIMI 122

Query: 353 SG-----LFKEMLYLCSQFSFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFS 400
           SG     LF+E L   S+  F    A       ++ +C++ ++  F + + C  +K+G+ 
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
              +  +AL+ ++        A+ +  R S +++  CWN +I    +N ++      F  
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVF-RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M       PDS T  +V++AC +LE    GK +    +K     D  V  A++ +Y +C 
Sbjct: 242 MCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCG 299

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILS 577
            +  A  VF    N ++ +W  M+S ++++     ALE+F   RH   E N  ++ S++S
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS----------------NCKSNA 621
           AC +  ++    Q+H  VF  GF  +S +++AL+ MYS                + +   
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA--CSHSGLVDEGLQYYN 679
             + MI+++    K  +AI LF  M   G+R  + SV SLLS   C + G    G    +
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            ++ +  V         +  +  + G L+E+Y+  + +P +     W +M+S  + +G
Sbjct: 480 GLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 208/621 (33%), Positives = 341/621 (54%), Gaps = 35/621 (5%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H++ I  G   S   ++   L+ MY  CGD+    + F  +    V  WN ++
Sbjct: 385 LEDGKRVHSVIISNGI--SIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLM 442

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +A  G F E+  L  +MQ +  V  +  T   ++   A    ++E + VHGY ++   
Sbjct: 443 SEYAKIGNFRESVSLFKKMQKL-GVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGF 501

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G +  ++NSL+  Y K   +  A  LF+ ++   D+VSWNSMI+G            +F 
Sbjct: 502 GSNTAVVNSLIAAYFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIFI 560

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +ML L  +   +TL+++L +  +  +L  G+++H + +K  FS   +  N L+ MY  CG
Sbjct: 561 QMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 620

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A  +  ++   +  S W   I A  + G + +AI  F  M Q +   PD  T+ ++
Sbjct: 621 NLNGATEVFVKMGDTTIVS-WTSTIAAYVREGLYSDAIGLFDEM-QSKGVRPDIYTVTSI 678

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC       +G+ +H   +K+ MG +  V NALI MY +C  ++ A  VF      ++
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            +WN MI  +SQN     ALELF  ++  F+P++I++  +L AC  L  L  G++IHGH+
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHI 798

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G+  +  ++ AL+DMY+ C               K   +W+ MI+ YG HG G EAI
Sbjct: 799 LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAI 858

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
             F+EM  +GI P +SS   +L+ACSHSGL++EG +++N+M  E  V P+ EH+ C+VD+
Sbjct: 859 STFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDL 918

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           L R G L +AY+FI+++PI+P   +WG +LS C  H D K+ ++VAE +F+LEP+N  YY
Sbjct: 919 LARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYY 978

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           + L+N+Y    +W++  ++ K
Sbjct: 979 VVLANVYAEAEKWEEVKKLRK 999



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 291/607 (47%), Gaps = 23/607 (3%)

Query: 13   LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
            L+  Y N         +F +  N  V  WN +++   +       +  F +M + G+  +
Sbjct: 410  LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469

Query: 73   STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              T   ++     +  +K+ + VH   +K G  +++++ N  +  Y K G + S+   F 
Sbjct: 470  CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529

Query: 133  GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
             +   D VSWN++++GC+ N +    L  F +M   G + D  +L S + A A +G LS 
Sbjct: 530  ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSL 589

Query: 193  GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            G+ +H  G+K  + +   V  +N+L+ MYS+CG++  A   F  M    +VSW + I  +
Sbjct: 590  GRALHGFGVKACFSEE--VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647

Query: 253  ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
               G + +A  L  EMQ  + V PDI TV +++  CA S  L +GR VH Y I+  +G +
Sbjct: 648  VREGLYSDAIGLFDEMQ-SKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN 706

Query: 313  LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLCSQ 365
            L + N+L++ Y+K  S+ +A L+F+ I P+ D+VSWN+MI G  +         L+L  Q
Sbjct: 707  LPVTNALINMYAKCGSVEEARLVFSKI-PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ 765

Query: 366  FSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              F     T+  +LP+C    +L+ G+ IH   L+ G+ ++     AL+ MY  CG LV 
Sbjct: 766  KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVL 825

Query: 422  AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
            A  L   I    D   W ++I     +G   EAI TF  M +     PD  +   +++AC
Sbjct: 826  AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEM-RIAGIEPDESSFSVILNAC 883

Query: 482  GNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLC 538
             +  L  EG      ++++  G++ ++++   ++ +  R  ++  A    ES     +  
Sbjct: 884  SHSGLLNEGWKFFN-SMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTT 942

Query: 539  TWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILSAC-TQLGVLRHGKQIHGHVF 596
             W  ++S    +     A ++  H+ E EP+      +L+    +       K++   + 
Sbjct: 943  IWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQ 1002

Query: 597  HLGFQEN 603
              GF++N
Sbjct: 1003 KRGFKQN 1009



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 225/463 (48%), Gaps = 30/463 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++     SL+ AY      ES+  LF E    DVV+WN+MI  CV N     GL  F
Sbjct: 500 GFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIF 559

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  G+  D TTL+ ++ A   +  L  GR +H   +KA    +    N  ++MY+KC
Sbjct: 560 IQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC 619

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+LN +   F  M     VSW + ++  +        +  F EM   G + D  +++S V
Sbjct: 620 GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A AC   L  G+ +H+  IK G   +  + VTN+LI+MY++CG +E A   F  +  KD
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSN--LPVTNALINMYAKCGSVEEARLVFSKIPVKD 737

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN +I G++ N    EA +L  +MQ  +  +PD  T+  ++  CA    L +GR +H
Sbjct: 738 IVSWNTMIGGYSQNSLPNEALELFLDMQ--KQFKPDDITMACVLPACAGLAALDKGREIH 795

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ +RR    DL +  +L+D Y+K   L  A+LLF+ I P  DL+SW  MI+G       
Sbjct: 796 GHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI-PKKDLISWTVMIAGYGMHGFG 854

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F EM     +   S+   IL +C+    L  G     W+       N  GV   
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG-----WKF-FNSMRNECGVEPK 908

Query: 410 MHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVAC 445
           +  Y    DL+A       A+  ++ +    DT+ W +++  C
Sbjct: 909 LEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 951



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 254/516 (49%), Gaps = 24/516 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ VH + I  G+  D +L    V MY  CGDL      F  +       WN +MS 
Sbjct: 385 LEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 444

Query: 149 CLH-NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
                N+ E   L F++M   G   +  + +  +   A LG++   K +H   +KLG+  
Sbjct: 445 YAKIGNFRESVSL-FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS 503

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +   +V NSLI+ Y + G +E+A   F  ++  DVVSWN++I+G  +NG      ++  +
Sbjct: 504 N--TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 561

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M L+  VE D+ T+V+++   A+   L  GR++HG+ ++     +++  N+L+D YSK  
Sbjct: 562 M-LILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCG 620

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAIL 375
           +L+ A  +F  +     +VSW S I+            GLF EM     +    T+ +I+
Sbjct: 621 NLNGATEVFVKMGDTT-IVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIV 679

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    SL+ G+ +H + +K G  +N    NAL++MY  CG +  A  +  +I    D 
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP-VKDI 738

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I   +QN    EA++ F  M  Q+   PD +T+  V+ AC  L    +G+ +HG
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREIHG 796

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             L+     D  V  AL+ MY +C  +  A  +F+     +L +W  MI+ +  +     
Sbjct: 797 HILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNE 856

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           A+  F  +     EP+E S   IL+AC+  G+L  G
Sbjct: 857 AISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG 892



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 235/525 (44%), Gaps = 45/525 (8%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA I+ F   G    A +LL +    +S E  + +  +++ LCA+   L +G+ VH   I
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKS---KSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII 396

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS-WNSMIS----------- 353
              +  D  +   L+  Y     L +   +F+ I  MND V  WN ++S           
Sbjct: 397 SNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI--MNDKVFLWNLLMSEYAKIGNFRES 454

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LFK+M  L    +  T   +L    +   ++  K +H + LKLGF +NT  VN+L+  
Sbjct: 455 VSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAA 514

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G + +A +L   +S   D   WN +I  C  NG     ++ F  M        D  
Sbjct: 515 YFKFGGVESAHNLFDELSE-PDVVSWNSMINGCVVNGFSGNGLEIFIQML-ILGVEVDLT 572

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV+V+ A  N+     G++LHG  +K+    +    N L+ MY +C ++  A+ VF   
Sbjct: 573 TLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKM 632

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
            +  + +W   I+A+ +      A+ LF  ++     P+  ++ SI+ AC     L  G+
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H +V   G   N  +++AL++MY+ C               K   +W++MI  Y  + 
Sbjct: 693 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNS 752

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              EA+ELF +M     +P   ++  +L AC+    +D+G + + ++L        ++ H
Sbjct: 753 LPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLH 808

Query: 695 V--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           V   +VDM  + G L  A      +P +     W  M++    HG
Sbjct: 809 VACALVDMYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYGMHG 852



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 18/159 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+ + L  + +L+  Y+       +  LF     KD+++W  MI           G+H 
Sbjct: 801 RGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG--------YGMHG 852

Query: 61  FG--------EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLC 111
           FG        EM   GI  D ++  +I++A +    L +G +  + +  + G+       
Sbjct: 853 FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
              V++ A+ G+L+ +      M    DT  W  ++SGC
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGC 951


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 238/797 (29%), Positives = 405/797 (50%), Gaps = 41/797 (5%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS     E +  +F +   ++  +WN +++  V        + FF  M+E G+R  S   
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 77  LIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
             +V+A  +  C+ +G   VH   IK G+  D  +    ++ Y   G +   +  F  + 
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + VSW ++M G  +N   ++ +  +R +   G   +  ++++ + +   L +   G  
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +    IK G + +  VSV NSLISM+  C  IE A   F  M  +D +SWN+II     N
Sbjct: 182 VLGSVIKSGLDTT--VSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  E++ +   +M+   + + D  T+  L+ +C  +  LR GR +HG  ++  L  ++ +
Sbjct: 240 GHCEKSLEYFSQMRYTHA-KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            NSL+  YS++     AE +F+ +    DL+SWNSM++             L  EML   
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRE-RDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              ++ T    L +C + E+L   K +H + + LG  +N I  NAL+ MY   G + AA 
Sbjct: 358 KATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ 414

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA-CG 482
            +  +I  + D   WN +I     N     AI+ F ++ +++    + +T+VN++SA   
Sbjct: 415 RVC-KIMPDRDEVTWNALIGGHADNKEPNAAIEAF-NLLREEGVPVNYITIVNLLSAFLS 472

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
             +L   G  +H   + +   L+T VQ++LITMY +C D+ +++ +F+   N N  TWN 
Sbjct: 473 PDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNA 532

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           ++SA +       AL+L    R+     ++ S     +    L +L  G+Q+H  +   G
Sbjct: 533 ILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHG 592

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           F+ N ++ +A +DMY  C               +S  +W+ +ISA   HG   +A E FH
Sbjct: 593 FESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFH 652

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           EM + G+RP   + +SLLSACSH GLVDEGL Y+++M  ++ V    EH VCI+D+LGR+
Sbjct: 653 EMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRA 712

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           GKL EA  FI  +P+ P   VW ++L+AC  HG+ ++ ++ A+ LF+L+  +   Y+  S
Sbjct: 713 GKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYS 772

Query: 765 NMYVALGRWKDAVEIGK 781
           N+  +  RW+D   + K
Sbjct: 773 NVCASTRRWRDVENVRK 789



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/594 (27%), Positives = 288/594 (48%), Gaps = 25/594 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLL  Y    +      +F E    ++V+W +++     N CV   +  +  +  +G+ 
Sbjct: 98  TSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVY 157

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +   +  ++ +   +     G  V    IK+G+    S+ N  ++M+  C  +  + C 
Sbjct: 158 CNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCV 217

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   DT+SWN+I++  +HN + EK L YF +M ++  + D +++S+ +        L
Sbjct: 218 FDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNL 277

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            +G+ +H + +K G E +  V V NSL+SMYSQ G  E AE  F  M  +D++SWN+++ 
Sbjct: 278 RWGRGLHGMVVKSGLESN--VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMA 335

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
               NG +  A +LL EM   R    +  T  T +S C +   L   + VH + I   L 
Sbjct: 336 SHVDNGNYPRALELLIEMLQTRKA-TNYVTFTTALSACYN---LETLKIVHAFVILLGLH 391

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
           ++L++ N+L+  Y K  S++ A+ +   I P  D V+WN++I G             F  
Sbjct: 392 HNLIIGNALVTMYGKFGSMAAAQRVCK-IMPDRDEVTWNALIGGHADNKEPNAAIEAFNL 450

Query: 359 MLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +       ++ T++ +L +  SP+  L+ G  IH   +  GF   T   ++L+ MY  CG
Sbjct: 451 LREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCG 510

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL  +  +   ++ N ++S WN ++ A    G  +EA+K    M +      D  +    
Sbjct: 511 DLNTSNYIFDVLA-NKNSSTWNAILSANAHYGPGEEALKLIIKM-RNDGIHLDQFSFSVA 568

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
            +  GNL L  EG+ LH L +K     +  V NA + MYG+C +I     +     + + 
Sbjct: 569 HAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQ 628

Query: 538 CTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHG 588
            +WN +ISA +++    +A E F     L   P+ ++ VS+LSAC+  G++  G
Sbjct: 629 RSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEG 682



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 185/690 (26%), Positives = 333/690 (48%), Gaps = 61/690 (8%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-- 174
           MY+K G +  ++  F  M   +  SWN +MSG +   + +K + +F  M   G +  +  
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 175 -VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             SL +A   S C+ E ++   +HA  IK G     +V    SL+  Y   G +   +  
Sbjct: 61  AASLVTACDRSGCMTEGAFQ--VHAHVIKCGLACDVFVGT--SLLHFYGTFGWVAEVDMV 116

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTLISLCADS 291
           F  +   ++VSW +++ G+A NG  +E   +   ++   +   E  +ATV+    +  D 
Sbjct: 117 FKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDK 176

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           +L   G  V G  I+  L   + + NSL+  +   +S+ +A  +F+ +    D +SWNS+
Sbjct: 177 ML---GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE-RDTISWNSI 232

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           I+              F +M Y  ++  + T+ A+LP C S ++L +G+ +H   +K G 
Sbjct: 233 ITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGL 292

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +N    N+L+ MY   G    A  +  ++    D   WN ++ +   NG++  A++   
Sbjct: 293 ESNVCVCNSLLSMYSQAGKSEDAEFVFHKM-RERDLISWNSMMASHVDNGNYPRALELLI 351

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYG 517
            M Q + A+ + VT    +SAC NLE     K +H   +  L+GL  +  + NAL+TMYG
Sbjct: 352 EMLQTRKAT-NYVTFTTALSACYNLETL---KIVHAFVI--LLGLHHNLIIGNALVTMYG 405

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK---AEVRALELFRHLEFEPNEISIVS 574
           +   + +A  V +   + +  TWN +I   + NK   A + A  L R      N I+IV+
Sbjct: 406 KFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVN 465

Query: 575 ILSA-CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           +LSA  +   +L HG  IH H+   GF+  +F+ S+L+ MY+ C               K
Sbjct: 466 LLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANK 525

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +++ W++++SA  ++G G EA++L  +M N GI   + S     +   +  L+DEG Q +
Sbjct: 526 NSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLH 585

Query: 679 NNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           + +++      E+  +V    +DM G+ G++ + +  +   P       W  ++SA + H
Sbjct: 586 SLIIKH---GFESNDYVLNATMDMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISALARH 641

Query: 737 GDTKMGKQV-AELL-FKLEPENVGYYISLS 764
           G  +  ++   E+L   L P++V +   LS
Sbjct: 642 GFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 180/647 (27%), Positives = 301/647 (46%), Gaps = 74/647 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  + SL++ + N    E +  +F +   +D ++WN++ITA V N      L +F
Sbjct: 190 GLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M     + D  T+  ++        L+ GR +H + +K+G+ ++  +CN  ++MY++ 
Sbjct: 250 SQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQA 309

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G    +E  F  M   D +SWN++M+  + N NYP + L    EM  + +  + V+ ++A
Sbjct: 310 GKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYP-RALELLIEMLQTRKATNYVTFTTA 368

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   L  L   K++HA  I LG   +  + + N+L++MY + G + AA+R    M  +
Sbjct: 369 LSACYNLETL---KIVHAFVILLGLHHN--LIIGNALVTMYGKFGSMAAAQRVCKIMPDR 423

Query: 241 DVVSWNAIIDGFALNGKFE---EAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLR 295
           D V+WNA+I G A N +     EAF+LL E      V  +  T+V L+S  L  D  LL 
Sbjct: 424 DEVTWNALIGGHADNKEPNAAIEAFNLLRE----EGVPVNYITIVNLLSAFLSPDD-LLD 478

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
            G  +H + +      +  + +SL+  Y++   L+ +  +F+ +A  N   +WN+++S  
Sbjct: 479 HGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNS-STWNAILSAN 537

Query: 354 ---GLFKEMLYLC----------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
              G  +E L L            QFSFS   AI+ +      L+ G+ +H   +K GF 
Sbjct: 538 AHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLT---LLDEGQQLHSLIIKHGFE 594

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           +N   +NA M MY  CG++   F +L +    S  S WNI+I A  ++G FQ+A + F  
Sbjct: 595 SNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRS-WNILISALARHGFFQQAREAFHE 653

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M       PD VT V+++SAC +  L  E     GLA  S M           T +G   
Sbjct: 654 ML-DLGLRPDHVTFVSLLSACSHGGLVDE-----GLAYFSSMS----------TKFG--- 694

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACT 580
                 T  E C         C+I    +      A      +   P ++   S+L+AC 
Sbjct: 695 ----VPTGIEHCV--------CIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACK 742

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-CKSNAAWSSM 626
             G L   ++    +F L   ++S        +YSN C S   W  +
Sbjct: 743 IHGNLELARKAADRLFELDSSDDSAYV-----LYSNVCASTRRWRDV 784


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 227/746 (30%), Positives = 394/746 (52%), Gaps = 49/746 (6%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            L +++ A  +   ++ GR +H L S    +  D  LC   + MYA CG  + S   F  
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ-ADNVSLSSAVAASACLGELSY 192
           +   +   WN ++S    N   ++ L  F EM  + +   D+ +    + A A + ++  
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +H L +K G  +  +V   N+L+S Y   G +  A + F  M  +++VSWN++I  F
Sbjct: 206 GLAVHGLVVKTGLVEDVFVG--NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263

Query: 253 ALNGKFEEAFDLLHEMQLMR---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           + NG  EE+F LL EM       +  PD+AT+VT++ +CA    +  G+ VHG+A++  L
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             +L++ N+LMD YSK   ++ A+++F      N +VSWN+M+ G            + +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN-VVSWNTMVGGFSAEGDTHGTFDVLR 382

Query: 358 EMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           +ML           T+L  +P C     L   K +HC+ LK  F  N +  NA +  Y  
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442

Query: 416 CGDLVAAFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           CG L    S  QR+ H   +   + WN +I    Q+   + ++     M +     PDS 
Sbjct: 443 CGSL----SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSF 497

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T+ +++SAC  L+    GK +HG  +++ +  D  V  +++++Y  C ++ +   +F++ 
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVLRHGK 589
            + +L +WN +I+ + QN    RAL +FR +     +   IS++ +  AC+ L  LR G+
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           + H +      ++++FI+ +L+DMY+                 KS A+W++MI  YG HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              EAI+LF EM  +G  P   + + +L+AC+HSGL+ EGL+Y + M   + ++P  +H+
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737

Query: 695 VCIVDMLGRSGKLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            C++DMLGR+G+L +A   + + +  +   G+W ++LS+C  H + +MG++VA  LF+LE
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           PE    Y+ LSN+Y  LG+W+D  ++
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKV 823



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 185/721 (25%), Positives = 324/721 (44%), Gaps = 47/721 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GI 69
           T ++T Y+     + S  +F    +K++  WNA+I++   N      L  F EM+    +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  T   ++ A   M+ +  G  VH L +K G++ D  + N  V+ Y   G +  +  
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM----GWSGEQADNVSLSSAVAASA 185
            F  M   + VSWN+++     N + E+  L   EM    G      D  +L + +   A
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              E+  GK +H   +KL  +    + + N+L+ MYS+CG I  A+  F     K+VVSW
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKE--LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N ++ GF+  G     FD+L +M      V+ D  T++  + +C     L   + +H Y+
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           +++   Y+ L+ N+ +  Y+K  SLS A+ +F+ I     + SWN++I G  +      S
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLS 480

Query: 365 -----QFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                Q   S LL       ++L +C+  +SL  GK +H + ++     +     +++ +
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI+CG+L    +L   +   S  S WN VI    QNG    A+  F+ M          +
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVS-WNTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGI 598

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           +++ V  AC  L     G+  H  ALK L+  D  +  +LI MY +   I  +S VF   
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
              +  +WN MI  +  +     A++LF  ++     P++++ + +L+AC   G+     
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL----- 713

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI-ELFHEMCN 648
            IH  + +L   ++SF       +  N K  A    M+   G   K    + E   E  +
Sbjct: 714 -IHEGLRYLDQMKSSF------GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            GI        SLLS+C     ++ G +    + E    +P  E++V + ++    GK +
Sbjct: 767 VGIWK------SLLSSCRIHQNLEMGEKVAAKLFELEPEKP--ENYVLLSNLYAGLGKWE 818

Query: 709 E 709
           +
Sbjct: 819 D 819



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 166/605 (27%), Positives = 287/605 (47%), Gaps = 42/605 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +    +L++ Y    +   +L LF     +++V+WN+MI    +N          
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276

Query: 62  GEMVEE----GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           GEM+EE        D  TL+ ++    +   +  G+ VH  ++K  +  +  L N  ++M
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNV 175
           Y+KCG + +++  F   +  + VSWNT++ G              R+M   GE  +AD V
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396

Query: 176 SLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           ++ +AV    C  E  L   K +H   +K  +  +  V+  N+ ++ Y++CG +  A+R 
Sbjct: 397 TILNAVP--VCFHESFLPSLKELHCYSLKQEFVYNELVA--NAFVASYAKCGSLSYAQRV 452

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F G+  K V SWNA+I G A +     + D   +M++   + PD  TV +L+S C+    
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKS 511

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           LR G+ VHG+ IR  L  DL +  S++  Y     L   + LF+A+     LVSWN++I+
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVIT 570

Query: 354 ------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                       G+F++M+    Q    +++ +  +C+   SL  G+  H + LK    +
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED 630

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +     +L+ MY   G +  +  +   +   S T+ WN +I+    +G  +EAIK F+ M
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 689

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGR 518
            Q+   +PD +T + V++AC +  L  EG  L  L  +KS  GL   +++   +I M GR
Sbjct: 690 -QRTGHNPDDLTFLGVLTACNHSGLIHEG--LRYLDQMKSSFGLKPNLKHYACVIDMLGR 746

Query: 519 CRDIKSASTVF--ESCYNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISI 572
              +  A  V   E     ++  W  ++S+    QN    E  A +LF   E EP +   
Sbjct: 747 AGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF---ELEPEKPEN 803

Query: 573 VSILS 577
             +LS
Sbjct: 804 YVLLS 808



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 225/496 (45%), Gaps = 21/496 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  + +L+  YS      ++  +F    NK+VV+WN M+                 +M+ 
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386

Query: 67  --EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             E ++ D  T+L  V      + L   + +HC S+K   + +  + N FV  YAKCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           + ++  F G+      SWN ++ G   +N P   L    +M  SG   D+ ++ S ++A 
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           + L  L  GK +H   I+   E   +V +  S++S+Y  CG++   +  F  M  K +VS
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 564

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I G+  NG  + A  +  +M ++  ++    +++ +   C+    LR GR  H YA
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++ LL  D  +  SL+D Y+K+ S++++  +FN +       SWN+MI G          
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEA 682

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
             LF+EM          T L +L +CN    +  G + +   +   G   N      ++ 
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742

Query: 412 MYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           M    G L  A  ++ + +S  +D   W  ++ +C  + + +   K    + + +   P+
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802

Query: 471 S-VTLVNVISACGNLE 485
           + V L N+ +  G  E
Sbjct: 803 NYVLLSNLYAGLGKWE 818


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 369/720 (51%), Gaps = 42/720 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  ++  G+     + N+ +++Y+K G +  +   F  +   D VSW  ++SG   N  
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +R+M  +G       LSS +++       + G++IHA G K G+    +V   
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG-- 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++I++Y +CG    AER F  M  +D V++N +I G A  G  E A ++  EMQ    +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGL 240

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  T+ +L++ CA    L++G  +H Y  +  +  D +M  SL+D Y K   +  A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 335 LFNAIAPMNDLVSWNSM------ISGLFKEMLYLC---------SQFSFSTLLAILPSCN 379
           +FN+ +   ++V WN M      I+ L K     C         +QF++     IL +C 
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP---CILRTCT 356

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               ++ G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W 
Sbjct: 357 CTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWT 415

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    Q+   ++A+  FK M Q+    PD++ L + IS C  +    +G  +H     
Sbjct: 416 SMIAGYVQHECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    D  + NAL+ +Y RC  I+ A + FE   + +  TWN ++S F+Q+     AL++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  ++    + N  + VS LSA   L  ++ GKQIH  V   G    + + +AL+ +Y  
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+++I++   HG+G EA++LF +M   GI+P   + I +
Sbjct: 595 CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGV 654

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L+ACSH GLV+EGL Y+ +M +EY +RP  +H+ C++D+ GR+G+L  A +FI+ +PI  
Sbjct: 655 LAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAA 714

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y    +W +  ++ K
Sbjct: 715 DAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRK 774



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/603 (28%), Positives = 288/603 (47%), Gaps = 21/603 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +      L+  YS       +  +F E   +D V+W AM++   +N      L  
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M   G+      L  ++S+ T+     QGR++H    K G  ++  + N  + +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG    +E  F  M   DTV++NT++SG     + E  L  F EM +SG   D V++SS 
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A LG+L  G  +H+   K G   S Y+ +  SL+ +Y +CGD+E A   F      
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGI-SSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN ++  F       ++F+L  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAA-GIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +++     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQHEC 426

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  FKEM           L + +  C    ++  G  IH      G+S +    NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+++Y  CG +  AFS  + I H  D   WN ++    Q+G  +EA+K F  M  Q    
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            +  T V+ +SA  NL    +GK +H   +K+    +T V NALI++YG+C   + A   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      N  +WN +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G++
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 586 RHG 588
             G
Sbjct: 665 EEG 667



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 186/380 (48%), Gaps = 12/380 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS   + E +  +      KDVV+W +MI   V++ C    L  F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + GI  D+  L   +S    +N ++QG  +H     +G   D S+ N  VN+YA+C
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +  +F  +   D ++WN ++SG   +   E+ L  F  M  SG + +  +  SA+
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA L E+  GK IHA  IK G+  S    V N+LIS+Y +CG  E A+  F  M+ ++
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGH--SFETEVGNALISLYGKCGSFEDAKMEFSEMSERN 612

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II   + +G+  EA DL  +M+    ++P+  T + +++ C+   L+ EG S  
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMK-KEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671

Query: 302 G-----YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y IR    +       ++D + ++  L +A+     +    D + W +++S   
Sbjct: 672 KSMSDEYGIRPRPDH----YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727

Query: 357 KEMLYLCSQFSFSTLLAILP 376
                   +F+   LL + P
Sbjct: 728 VHKNIEVGEFAAKHLLELEP 747


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 199/599 (33%), Positives = 325/599 (54%), Gaps = 32/599 (5%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V + N+L+SM+ + GD+  A   F  M  +D+ SWN ++ G+   G F+EA  L H + L
Sbjct: 69  VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRI-L 127

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + PD+ T  +++  CA ++ L  GR VH + +R     D+ ++N+L+  Y K   + 
Sbjct: 128 WAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSC 378
            A +LF+ + P  D +SWN+MISG F+        E+ +   + S      T+ +++ +C
Sbjct: 188 SARMLFDKM-PTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISAC 246

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                   G  +H + ++  +  N    N+L+ MY++ G    A S+   +    D   W
Sbjct: 247 ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM-ECRDVVSW 305

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I  C  N    +A++T+K+M +     PD VT+ +V+SAC +L     G  LH LA 
Sbjct: 306 TTIISGCVDNLLPDKALETYKTM-EITGTMPDEVTIASVLSACASLGQLDMGMKLHELAE 364

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           ++   L   V N+LI MY +C+ I+ A  +F    + ++ +W  +I+    N     AL 
Sbjct: 365 RTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALI 424

Query: 559 LFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
            FR   L+ +PN ++++S LSAC ++G L  GK+IH H    G   + F+ +A+LD+Y  
Sbjct: 425 FFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVR 484

Query: 617 C--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
           C              K   AW+ +++ Y   GKG   +ELF  M  S I P   + ISLL
Sbjct: 485 CGRMRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLL 544

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            ACS SG+V EGL+Y+  M   Y + P  +H+ C+VD+LGR+GKL EA+EFI+ +PI+P 
Sbjct: 545 CACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPD 604

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           P +WGA+L+AC  H    +G+  A+ +FK + E++GYYI L N+Y   G+W +  ++ +
Sbjct: 605 PAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRR 663



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 277/571 (48%), Gaps = 41/571 (7%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M+ + GD+ ++   F  M   D  SWN ++ G     + ++ L  +  + W+G
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +  S + + A   +L  G+ +HA  ++  ++    V V N+LI+MY +CGD+ +
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMD--VDVVNALITMYVKCGDVVS 188

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  +D +SWNA+I G+  N +  E  +L   M+ + S++PD+ T+ ++IS C 
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMREL-SIDPDLMTMTSVISACE 247

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
                R G  +H Y +R     ++ + NSL+  Y       +AE +F+ +    D+VSW 
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM-ECRDVVSWT 306

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++ISG             +K M    +     T+ ++L +C S   L+ G  +H    + 
Sbjct: 307 TIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERT 366

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G     +  N+L+ MY  C  +  A  +  +I  + D   W  VI     N    EA+  
Sbjct: 367 GHILYVVVANSLIDMYSKCKRIEKALEIFHQIP-DKDVISWTSVINGLRINNRCFEALIF 425

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M  +  + P+SVTL++ +SAC  +     GK +H  ALK+ MG D  + NA++ +Y 
Sbjct: 426 FRKMILK--SKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYV 483

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVS 574
           RC  +++A   F +    ++  WN +++ ++Q       +ELF+ +   E  P++++ +S
Sbjct: 484 RCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFIS 542

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L AC++ G++  G +     +    + N  I+  L            ++ ++   G  G
Sbjct: 543 LLCACSRSGMVTEGLE-----YFQRMKVNYHITPNL----------KHYACVVDLLGRAG 587

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           K  EA E    M    I+P  +   +LL+AC
Sbjct: 588 KLNEAHEFIERM---PIKPDPAIWGALLNAC 615



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 20/491 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ +       ++  +F     +D+ +WN ++    +       L  +  ++  GIR 
Sbjct: 74  ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T   ++ +      L +GR VH   ++     D  + N  + MY KCGD+ S+   F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N+   + L  F  M       D ++++S ++A   LG+  
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H+  ++  Y+ +  +SV NSLI MY   G  + AE  F GM C+DVVSW  II G
Sbjct: 254 LGTQLHSYVVRTAYDGN--ISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG 311

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              N   ++A +    M++  ++ PD  T+ +++S CA    L  G  +H  A R     
Sbjct: 312 CVDNLLPDKALETYKTMEITGTM-PDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
            +++ NSL+D YSK   + KA  +F+ I P  D++SW S+I+GL            F++M
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQI-PDKDVISWTSVINGLRINNRCFEALIFFRKM 429

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           + L S+ +  TL++ L +C    +L  GK IH   LK G   +    NA++ +Y+ CG +
Sbjct: 430 I-LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRM 488

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A +  Q   +  D   WNI++    Q G     ++ FK M + +  +PD VT ++++ 
Sbjct: 489 RTALN--QFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESE-INPDDVTFISLLC 545

Query: 480 ACGNLELAFEG 490
           AC    +  EG
Sbjct: 546 ACSRSGMVTEG 556



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 25/455 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+T Y       S+  LF +   +D ++WNAMI+   EN   + GL  F  M E  I  
Sbjct: 175 ALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDP 234

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+  ++SA   +   + G  +H   ++     + S+ N  + MY   G    +E  F
Sbjct: 235 DLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVF 294

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           SGM C D VSW TI+SGC+ N  P+K L  ++ M  +G   D V+++S ++A A LG+L 
Sbjct: 295 SGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLD 354

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H L  + G+    YV V NSLI MYS+C  IE A   F  +  KDV+SW ++I+G
Sbjct: 355 MGMKLHELAERTGH--ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVING 412

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             +N +  EA     +M L    +P+  T+++ +S CA    L  G+ +H +A++  +G+
Sbjct: 413 LRINNRCFEALIFFRKMIL--KSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGF 470

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + N+++D Y +   +  A   FN      D+ +WN +++G            LFK M
Sbjct: 471 DGFLPNAILDLYVRCGRMRTALNQFN--LNEKDVGAWNILLTGYAQKGKGAMVMELFKRM 528

Query: 360 LYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           +         T +++L +C+      E LE+ + +   ++    + N      ++ +   
Sbjct: 529 VESEINPDDVTFISLLCACSRSGMVTEGLEYFQRM---KVNYHITPNLKHYACVVDLLGR 585

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
            G L  A   ++R+    D + W  ++ AC  + H
Sbjct: 586 AGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRH 620



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 166/391 (42%), Gaps = 66/391 (16%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DT 506
           +G+ ++A+K   SM Q+     +    V +I  C N     EG+ +    L SL+ L   
Sbjct: 11  SGNLEQALKHLASM-QEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSV 69

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
           R+ NAL++M+ R  D+ +A  VF      +L +WN ++  +++      AL L+  +   
Sbjct: 70  RLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWA 129

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              P+  +  S+L +C     L  G+++H HV    F  +  + +AL+ MY  C      
Sbjct: 130 GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSA 189

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-- 666
                    +   +W++MIS Y  + +  E +ELF  M    I P   ++ S++SAC   
Sbjct: 190 RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249

Query: 667 ---------HSGLV----DEGLQYYNNMLEEY-------------------DVRPETEHH 694
                    HS +V    D  +  YN++++ Y                   DV   T   
Sbjct: 250 GDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTII 309

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
              VD L    K  E Y+ ++     P      ++LSAC+  G   MG ++ EL      
Sbjct: 310 SGCVDNL-LPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHEL-----A 363

Query: 755 ENVGYYI------SLSNMYVALGRWKDAVEI 779
           E  G+ +      SL +MY    R + A+EI
Sbjct: 364 ERTGHILYVVVANSLIDMYSKCKRIEKALEI 394



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 152/318 (47%), Gaps = 13/318 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC-VENRCVVMGLHF 60
           G + ++  + SL+  YS     E +L +F++  +KDV++W ++I    + NRC    L F
Sbjct: 367 GHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRC-FEALIF 425

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+ +  + +S TL+  +SA  ++  L  G+ +H  ++KAGM  D  L N  +++Y +
Sbjct: 426 FRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVR 484

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + ++   F+ ++  D  +WN +++G          +  F+ M  S    D+V+  S 
Sbjct: 485 CGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISL 543

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +  G ++ G + +   +K+ Y  +P +     ++ +  + G +  A      M  K
Sbjct: 544 LCACSRSGMVTEG-LEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIK 602

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D   W A+++   ++        LL E+      + D  ++   I LC  +L    G+ 
Sbjct: 603 PDPAIWGALLNACRIHRHV-----LLGELAAQHIFKQDAESIGYYILLC--NLYADSGKW 655

Query: 300 VHGYAIRRLLGYDLLMMN 317
                +RR +  + L+++
Sbjct: 656 DEVAKVRRTMKEEGLIVD 673


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 200/590 (33%), Positives = 319/590 (54%), Gaps = 34/590 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             L+ MY +CGD+E A R F  M    DV  W A++ G+A  G   E   L  +M     
Sbjct: 133 QKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCC-G 191

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V PD  T+  ++   A    + +G  VHG   +   G    + N+LM FY+KSN    A 
Sbjct: 192 VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAI 251

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
           L+F+ + P  D++SWNSMISG            LF  M     +   +TLL++LP+C   
Sbjct: 252 LVFDGM-PHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAEL 310

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
             L  G+ +H + +K GF + T   N L+ MY NC D  +   + + +   +  S W  +
Sbjct: 311 HLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS-WTAM 369

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I + T+ G + +    F+ M  +    PD   + + + A    EL   GKS+HG A+++ 
Sbjct: 370 ITSYTRAGLYDKVAGLFQEMGLE-GTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNG 428

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           M     V NAL+ MY +C +++ A  +F+   + ++ +WN +I  +S+N     A  LF 
Sbjct: 429 MEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFT 488

Query: 562 H--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
              L+  PN +++  IL A   L  L  G+++H +    G+ E+ F+++AL+DMY  C  
Sbjct: 489 EMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGA 548

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K+  +W+ M++ YG HG+G +AI LF +M  SGI P  +S  ++L A
Sbjct: 549 LLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYA 608

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSHSGL DEG ++++ M +E+ + P  +H+ C+VD+L  +G L+EAYEFI ++PI+P   
Sbjct: 609 CSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSS 668

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +W ++L  C  H + K+ ++VAE +F+LEPEN GYY+ L+N+Y    RW+
Sbjct: 669 IWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWE 718



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/636 (27%), Positives = 296/636 (46%), Gaps = 51/636 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            L+  Y      E++  +F E     DV  W A+++   +   +  G+  F +M   G+R
Sbjct: 134 KLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVR 193

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D+ T+  ++  +  +  ++ G VVH L  K G  +  ++ N  +  YAK      +   
Sbjct: 194 PDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILV 253

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM   D +SWN+++SGC  N   +K +  F  M   GE+ D+ +L S + A A L  L
Sbjct: 254 FDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLL 313

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+V+H   +K G+      S+ N L+ MYS C D  +  + F  M  K+VVSW A+I 
Sbjct: 314 FLGRVVHGYSVKTGFISQ--TSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMIT 371

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +   G +++   L  EM L     PDI  + + +   A + LL+ G+SVHGYAIR  + 
Sbjct: 372 SYTRAGLYDKVAGLFQEMGL-EGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGME 430

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             L + N+LM+ Y K  ++ +A+L+F+ +    D++SWN++I G            LF E
Sbjct: 431 KVLAVTNALMEMYVKCGNMEEAKLIFDGVVS-KDMISWNTLIGGYSRNNLANEAFSLFTE 489

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML L  + +  T+  ILP+  S  SLE G+ +H + L+ G+  +    NAL+ MY+ CG 
Sbjct: 490 ML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGA 548

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L+ A  L  R+S N +   W I++     +G  ++AI  F+ M +    +PD+ +   ++
Sbjct: 549 LLLARRLFDRLS-NKNLISWTIMVAGYGMHGRGRDAIALFEQM-RVSGIAPDAASFSAIL 606

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC +  L  EG      A++    ++ R+++                            
Sbjct: 607 YACSHSGLRDEGWRFFD-AMRKEHKIEPRLKH---------------------------- 637

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            + CM+           A E    +  EP+    VS+L  C     ++  +++   VF L
Sbjct: 638 -YTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFEL 696

Query: 599 GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
              EN+     L ++Y+  +   A   + +  G  G
Sbjct: 697 E-PENTGYYVLLANIYAEAERWEAVRKLKNKIGGRG 731



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 178/666 (26%), Positives = 301/666 (45%), Gaps = 51/666 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF----VNMYAKCGDLNSS 127
           D  +   ++   +++  L+ G+  H L ++A  +    + NV     V MY KCGDL ++
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGKRAHFL-VRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148

Query: 128 ECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
              F  M   +D   W  +MSG        + +L FR+M   G + D  ++S  +   A 
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LG +  G+V+H L  KLG+      +V N+L++ Y++    + A   F GM  +DV+SWN
Sbjct: 209 LGSIEDGEVVHGLLEKLGF--GSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWN 266

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I G   NG +++A +L   M L    E D AT+++++  CA+  LL  GR VHGY+++
Sbjct: 267 SMISGCTSNGLYDKAIELFVRMWL-EGEELDSATLLSVLPACAELHLLFLGRVVHGYSVK 325

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
                   + N L+D YS  +       +F  +   N +VSW +MI+            G
Sbjct: 326 TGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKN-VVSWTAMITSYTRAGLYDKVAG 384

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF+EM    ++     + + L +    E L+ GKS+H + ++ G        NALM MY+
Sbjct: 385 LFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYV 444

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG++  A  +   +  + D   WN +I   ++N    EA   F  M  Q    P++VT+
Sbjct: 445 KCGNMEEAKLIFDGVV-SKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLR--PNAVTM 501

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
             ++ A  +L     G+ +H  AL+     D  V NALI MY +C  +  A  +F+   N
Sbjct: 502 TCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSN 561

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            NL +W  M++ +  +     A+ LF  +      P+  S  +IL AC+  G+   G + 
Sbjct: 562 KNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWR- 620

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
               F    ++   I   L            ++ M+      G   EA E    M    I
Sbjct: 621 ----FFDAMRKEHKIEPRL----------KHYTCMVDLLINTGNLKEAYEFIDSM---PI 663

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEA 710
            P  S  +SLL  C     +   ++    + E  +++ PE   +  ++  +    +  EA
Sbjct: 664 EPDSSIWVSLLRGCR----IHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEA 719

Query: 711 YEFIKN 716
              +KN
Sbjct: 720 VRKLKN 725



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 229/457 (50%), Gaps = 18/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      +L+  Y+  +  + ++ +F    ++DV++WN+MI+ C  N      +  F
Sbjct: 226 GFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELF 285

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG   DS TLL ++ A  +++ L  GRVVH  S+K G I+ +SL NV ++MY+ C
Sbjct: 286 VRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC 345

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D  S+   F  M   + VSW  +++        +K    F+EMG  G + D  +++SA+
Sbjct: 346 SDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSAL 405

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    L +GK +H   I+ G E    ++VTN+L+ MY +CG++E A+  F G+  KD
Sbjct: 406 HAFAGNELLKHGKSVHGYAIRNGME--KVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKD 463

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWN +I G++ N    EAF L  EM L   + P+  T+  ++   A    L  GR +H
Sbjct: 464 MISWNTLIGGYSRNNLANEAFSLFTEMLL--QLRPNAVTMTCILPAAASLSSLERGREMH 521

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+RR    D  + N+L+D Y K  +L  A  LF+ ++  N L+SW  M++G       
Sbjct: 522 AYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKN-LISWTIMVAGYGMHGRG 580

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF++M         ++  AIL +C+     + G +     + +            
Sbjct: 581 RDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTC 640

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ + IN G+L  A+  +  +    D+S W  ++  C
Sbjct: 641 MVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGC 677


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 215/698 (30%), Positives = 368/698 (52%), Gaps = 38/698 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF-REM 165
           D  L N  ++ Y+K    + ++  F  M   + V+W++++S    + Y  + LL F R M
Sbjct: 86  DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145

Query: 166 GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
               E+ +   L+S V A   LG LS    +H   +K G+    YV    SLI  Y++ G
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG--TSLIDFYAKRG 203

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
            ++ A   F G+  K  V+W AII G+A  G+ E +  L ++M+    V PD   + +++
Sbjct: 204 YVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMR-EGDVYPDRYVISSVL 262

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           S C+    L  G+ +HGY +RR    D+ ++N ++DFY K + +     LFN +    D+
Sbjct: 263 SACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVD-KDV 321

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
           VSW +MI+G            LF EM+    +       ++L SC S ++L+ G+ +H +
Sbjct: 322 VSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAY 381

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            +K+   N+    N L+ MY  C  L  A  +   ++  +  S +N +I   ++     E
Sbjct: 382 AIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVS-YNAMIEGYSRQDKLVE 440

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A+  F+ M +   + P  +T V+++    +L L      +H L +K  + LD+   +ALI
Sbjct: 441 ALDLFREM-RLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALI 499

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
            +Y +C  +  A  VFE  Y+ ++  WN M S +SQ      +L+L++ L+    +PNE 
Sbjct: 500 DVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEF 559

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +  ++++A + +  LRHG+Q H  V  +G  ++ F++++L+DMY+ C             
Sbjct: 560 TFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSST 619

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             +  A W+SMIS Y  HG   +A+E+F  M   G++P   + + LLSACSH+GL+D G 
Sbjct: 620 NQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGF 679

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
            ++ +M  ++ + P  +H+ C+V +LGR+GK+ EA EF+K +PI+P   VW ++LSAC  
Sbjct: 680 HHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRV 738

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
            G  ++G   AE+    +P + G YI LSN++ + G W
Sbjct: 739 SGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMW 776



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 198/679 (29%), Positives = 326/679 (48%), Gaps = 41/679 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GIR 70
           +LL AYS ++    +  LF    ++++VTW++M++   ++   V  L  F   +     +
Sbjct: 92  TLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEK 151

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +   L  +V A TQ+  L Q   +H   +K G + D  +    ++ YAK G ++ +   
Sbjct: 152 PNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLI 211

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+    TV+W  I++G       E  L  F +M       D   +SS ++A + L  L
Sbjct: 212 FDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFL 271

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   ++ G++    VSV N +I  Y +C  ++   + F  +  KDVVSW  +I 
Sbjct: 272 EGGKQIHGYVLRRGFDMD--VSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIA 329

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G   N    +A DL  EM + +  +PD     ++++ C     L++GR VH YAI+  + 
Sbjct: 330 GCMQNSFHGDAMDLFVEM-VRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNID 388

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D  + N L+D Y+K +SL+ A  +F+ +A +N +VS+N+MI G            LF+E
Sbjct: 389 NDDFVKNGLIDMYAKCDSLTNARKVFDLVAAIN-VVSYNAMIEGYSRQDKLVEALDLFRE 447

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M    S  +  T +++L   +S   LE    IHC  +K G S ++   +AL+ +Y  C  
Sbjct: 448 MRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSC 507

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  + + I ++ D   WN +    +Q    +E++K +K + Q     P+  T   VI
Sbjct: 508 VGDARLVFEEI-YDRDIVVWNAMFSGYSQQLENEESLKLYKDL-QMSRLKPNEFTFAAVI 565

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +A  N+     G+  H   +K  +  D  V N+L+ MY +C  I+ +   F S    ++ 
Sbjct: 566 AAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIA 625

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN MIS ++Q+    +ALE+F  +  E   PN ++ V +LSAC+  G+L  G       
Sbjct: 626 CWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLG------- 678

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           FH     + F     +D Y         + M+S  G  GK +EA E   +M    I+P  
Sbjct: 679 FHHFESMSKFGIEPGIDHY---------ACMVSLLGRAGKIYEAKEFVKKM---PIKPAA 726

Query: 656 SSVISLLSACSHSGLVDEG 674
               SLLSAC  SG V+ G
Sbjct: 727 VVWRSLLSACRVSGHVELG 745



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 275/602 (45%), Gaps = 55/602 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   TSL+  Y+   Y + +  +F     K  VTW A+I    +     + L  F
Sbjct: 184 GFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLF 243

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   +  ++SA + +  L+ G+ +H   ++ G   D S+ N  ++ Y KC
Sbjct: 244 NQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKC 303

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +    F+ +   D VSW T+++GC+ N++    +  F EM   G + D    +S +
Sbjct: 304 HKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVL 363

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  G+ +HA  IK+  ++  +V   N LI MY++C  +  A + F  +   +
Sbjct: 364 NSCGSLQALQKGRQVHAYAIKVNIDNDDFVK--NGLIDMYAKCDSLTNARKVFDLVAAIN 421

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS+NA+I+G++   K  EA DL  EM+L  S  P + T V+L+ L +   LL     +H
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREMRLSLS-PPTLLTFVSLLGLSSSLFLLELSSQIH 480

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-- 359
              I+  +  D    ++L+D YSK + +  A L+F  I    D+V WN+M SG  +++  
Sbjct: 481 CLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYD-RDIVVWNAMFSGYSQQLEN 539

Query: 360 ---LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
              L L      S       T  A++ + ++  SL  G+  H   +K+G  ++    N+L
Sbjct: 540 EESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSL 599

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  +       ++  D +CWN +I    Q+G   +A++ F+ M   +   P
Sbjct: 600 VDMYAKCGSIEESHKAFSS-TNQRDIACWNSMISTYAQHGDAAKALEVFERMI-MEGVKP 657

Query: 470 DSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
           + VT V ++SAC   G L+L F     H     S  G++  + +                
Sbjct: 658 NYVTFVGLLSACSHAGLLDLGF-----HHFESMSKFGIEPGIDH---------------- 696

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
                        + CM+S   +      A E  + +  +P  +   S+LSAC   G + 
Sbjct: 697 -------------YACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVE 743

Query: 587 HG 588
            G
Sbjct: 744 LG 745



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 212/464 (45%), Gaps = 16/464 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +     ++  Y      ++   LF    +KDVV+W  MI  C++N      +  
Sbjct: 284 RGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDL 343

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EMV +G + D+     ++++   +  L++GR VH  +IK  +  D  + N  ++MYAK
Sbjct: 344 FVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAK 403

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  L ++   F  +   + VS+N ++ G    +   + L  FREM  S      ++  S 
Sbjct: 404 CDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSL 463

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +  S+ L  L     IH L IK G     +    ++LI +YS+C  +  A   F  +  +
Sbjct: 464 LGLSSSLFLLELSSQIHCLIIKFGVSLDSFAG--SALIDVYSKCSCVGDARLVFEEIYDR 521

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V WNA+  G++   + EE+  L  ++Q+ R ++P+  T   +I+  ++   LR G+  
Sbjct: 522 DIVVWNAMFSGYSQQLENEESLKLYKDLQMSR-LKPNEFTFAAVIAAASNIASLRHGQQF 580

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+  L  D  + NSL+D Y+K  S+ ++   F++     D+  WNSMIS       
Sbjct: 581 HNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSS-TNQRDIACWNSMISTYAQHGD 639

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F+ M+    + ++ T + +L +C+    L+ G        K G          
Sbjct: 640 AAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYAC 699

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G +  A   ++++        W  ++ AC  +GH +
Sbjct: 700 MVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVE 743



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 188/391 (48%), Gaps = 39/391 (9%)

Query: 298 RSVHGYAIRRLLGY---DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           + +H + +  +LG+   D+ ++N+L+  YSK N  S A+ LF+ + P  +LV+W+SM+S 
Sbjct: 71  KKIHAHIV--VLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTM-PHRNLVTWSSMVSM 127

Query: 355 ------------LFKEMLYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                       LF   +  CS+     +LA ++ +C    +L     +H + +K GF  
Sbjct: 128 YTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ 187

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +     +L+  Y   G +  A  +   +   + T  W  +I    + G  + ++K F  M
Sbjct: 188 DVYVGTSLIDFYAKRGYVDEARLIFDGLKVKT-TVTWTAIIAGYAKLGRSEVSLKLFNQM 246

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            ++ +  PD   + +V+SAC  LE    GK +HG  L+    +D  V N +I  Y +C  
Sbjct: 247 -REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHK 305

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
           +K+   +F    + ++ +W  MI+   QN     A++LF  +    ++P+     S+L++
Sbjct: 306 VKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNS 365

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--NA-------------AW 623
           C  L  L+ G+Q+H +   +    + F+ + L+DMY+ C S  NA             ++
Sbjct: 366 CGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSY 425

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           ++MI  Y    K  EA++LF EM  S   PT
Sbjct: 426 NAMIEGYSRQDKLVEALDLFREMRLSLSPPT 456


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 223/694 (32%), Positives = 358/694 (51%), Gaps = 38/694 (5%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY + G L  ++  F  +    T +WN ++ G          LL++ +M  +G   D  +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
               V A   L  +  GK++H     +G ++  +V   +SLI +Y++ G +  A+  F  
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG--SSLIKLYAENGHLSDAQYLFDN 118

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD V WN +++G+  NG    A  +  EM+    ++P+  T   ++S+CA   +L  
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMR-HSEIKPNSVTFACVLSVCASEAMLDL 177

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  +HG A+   L  D  + N+L+  YSK   L  A  LF+ + P +DLVSWN +ISG  
Sbjct: 178 GTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTL-PQSDLVSWNGIISGYV 236

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF+ M+    +    T  + LP  N   SL+  K IH + ++     +  
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 405 GVNALMHMYINCGDL-VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             +AL+ +Y  C D+ +A  +L Q  S + DT     +I     NG  +EA++ F+ + Q
Sbjct: 297 LKSALIDIYFKCRDVEMAQKNLCQ--SSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ 354

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           ++   P SVT  ++  A   L     GK LHG  +K+ +     V +A++ MY +C  + 
Sbjct: 355 ER-MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACT 580
            A  VF      +   WN MI++ SQN     A+ LFR +  E      VSI   LSAC 
Sbjct: 414 LACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACA 473

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            L  L +GK+IHG +     + + +  S+L+DMY+ C               K+  +W+S
Sbjct: 474 NLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNS 533

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +ISAYG HG   E + LFHEM  +GI+P   + + ++SAC H+G VDEG++YY+ M EEY
Sbjct: 534 IISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEY 593

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            +    EH+ C+ DM GR+G+L EA+E I ++P  P  GVWG +L AC  HG+ ++ +  
Sbjct: 594 GIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVA 653

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           ++ LF L+P N GYY+ L+N+    G+W+  +++
Sbjct: 654 SKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKV 687



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 189/728 (25%), Positives = 331/728 (45%), Gaps = 48/728 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y      + +  LFY         WN MI            L F+ +M+  G+  D  T 
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             +V A   +  +K G++VH      G+  D  + +  + +YA+ G L+ ++  F  +  
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            D+V WN +++G + N      +  F EM  S  + ++V+ +  ++  A    L  G  +
Sbjct: 122 KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQL 181

Query: 197 HALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           H + +  G E DSP   V N+L++MYS+C  ++AA + F  +   D+VSWN II G+  N
Sbjct: 182 HGIAVGCGLELDSP---VANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G   EA  L   M +   ++PD  T  + +    + L L+  + +HGY IR  +  D+ +
Sbjct: 239 GLMGEAEHLFRGM-ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC 363
            ++L+D Y K   +  A+      +   D V   +MISG             F+ ++   
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSF-DTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            + +  T  +I P+     +L  GK +H   +K          +A++ MY  CG L  A 
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +  RI+   D  CWN +I +C+QNG   EAI  F+ M   +    D V++   +SAC N
Sbjct: 417 RVFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQMG-MEGTRYDCVSISGALSACAN 474

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     GK +HGL +K  +  D   +++LI MY +C ++  +  VF+     N  +WN +
Sbjct: 475 LPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSI 534

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           ISA+  +      L LF  +     +P+ ++ + I+SAC   G +  G +     +HL  
Sbjct: 535 ISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIR----YYHLMT 590

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
           +E      A ++ Y+ C ++         +G  G+  EA E  + M      P      +
Sbjct: 591 EEYGI--PARMEHYA-CVAD--------MFGRAGRLHEAFETINSM---PFPPDAGVWGT 636

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYE---FIKN 716
           LL AC   G V+       ++   +D+ P  + ++V + ++   +GK ++  +    +K 
Sbjct: 637 LLGACHIHGNVELAEVASKHL---FDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKE 693

Query: 717 LPIQPKPG 724
             ++  PG
Sbjct: 694 RGVRKVPG 701



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 256/553 (46%), Gaps = 22/553 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             +SL+  Y+   +   +  LF     KD V WN M+   V+N      +  F EM    
Sbjct: 95  VGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE 154

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ +S T   ++S       L  G  +H +++  G+  DS + N  + MY+KC  L ++ 
Sbjct: 155 IKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAAR 214

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +  +D VSWN I+SG + N    +    FR M  +G + D+++ +S +     L 
Sbjct: 215 KLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELL 274

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L + K IH   I+  +     V + ++LI +Y +C D+E A++     +  D V    +
Sbjct: 275 SLKHCKEIHGYIIR--HAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTM 332

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+ LNGK +EA +    + +   ++P   T  ++    A    L  G+ +HG  I+  
Sbjct: 333 ISGYVLNGKNKEALEAFRWL-VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
           L     + ++++D Y+K   L  A  +FN I    D + WNSMI+             LF
Sbjct: 392 LDEKCHVGSAILDMYAKCGRLDLACRVFNRITE-KDAICWNSMITSCSQNGRPGEAINLF 450

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           ++M    +++   ++   L +C +  +L +GK IH   +K    ++    ++L+ MY  C
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKC 510

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L  +  +  R+   ++ S WN +I A   +G  +E +  F  M  +    PD VT + 
Sbjct: 511 GNLNFSRRVFDRMQEKNEVS-WNSIISAYGNHGDLKECLALFHEML-RNGIQPDHVTFLG 568

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESCY 533
           +ISACG+     EG   + L  +   G+  R+++   +  M+GR   +  A  T+    +
Sbjct: 569 IISACGHAGQVDEGIRYYHLMTEEY-GIPARMEHYACVADMFGRAGRLHEAFETINSMPF 627

Query: 534 NCNLCTWNCMISA 546
             +   W  ++ A
Sbjct: 628 PPDAGVWGTLLGA 640



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 218/460 (47%), Gaps = 17/460 (3%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P + +LL  YS     +++  LF      D+V+WN +I+  V+N  +    H F  M+  
Sbjct: 195 PVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISA 254

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI+ DS T    +  + ++  LK  + +H   I+  ++ D  L +  +++Y KC D+  +
Sbjct: 255 GIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMA 314

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +         DTV   T++SG + N   ++ L  FR +     +  +V+ SS   A A L
Sbjct: 315 QKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L+ GK +H   IK   ++  +V   ++++ MY++CG ++ A R F  +T KD + WN+
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVG--SAILDMYAKCGRLDLACRVFNRITEKDAICWNS 432

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   + NG+  EA +L  +M  M     D  ++   +S CA+   L  G+ +HG  I+ 
Sbjct: 433 MITSCSQNGRPGEAINLFRQMG-MEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG 491

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GL 355
            L  DL   +SL+D Y+K  +L+ +  +F+ +   N+ VSWNS+IS             L
Sbjct: 492 PLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNE-VSWNSIISAYGNHGDLKECLAL 550

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F EML    Q    T L I+ +C     ++ G +  H    + G          +  M+ 
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
             G L  AF  +  +    D   W  ++ AC  +G+ + A
Sbjct: 611 RAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELA 650



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 3/150 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   +SL+  Y+       S  +F     K+ V+WN++I+A   +  +   L  F EM+ 
Sbjct: 497 LYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLR 556

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            GI+ D  T L I+SA      + +G R  H ++ + G+ A         +M+ + G L+
Sbjct: 557 NGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLH 616

Query: 126 SSECTFSGM-HCADTVSWNTIMSGC-LHNN 153
            +  T + M    D   W T++  C +H N
Sbjct: 617 EAFETINSMPFPPDAGVWGTLLGACHIHGN 646


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 222/714 (31%), Positives = 374/714 (52%), Gaps = 38/714 (5%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VHC  +  G+  D  L N+ ++ Y K G +  +   F  M   + VSW++++S     
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 153 NYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            Y EK LLYF E   +  ++ +   L+S + A         G  +H+  IK G+ +  YV
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               SL+ +Y++ G+I+ A   F G+  K  V+W AII G+  +G+ E +  L + M + 
Sbjct: 180 G--TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLM-ME 236

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            +V PD   + ++++ C+    L+ G+ +H Y +R     D+   N L+DFY+K   +  
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
            + LF+ +   N ++SW +MI+G            L  EM  +  +       ++L SC 
Sbjct: 297 GKALFDRLDVKN-IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG 355

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S ++L+ G+ IH + +K+   ++    NAL+ MY  C  L  A  +   ++ +S    +N
Sbjct: 356 SVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHS-VVYYN 414

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I   ++ G+   A++ F+ M + ++ SP  +T V+++     L      K +HGL +K
Sbjct: 415 AMIEGYSRQGYLCGALEVFQEM-RLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               LD    +ALI +Y +C  I+ A  VFE   N ++  WN + S ++       A +L
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKL 533

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +  L+     PNE +  ++ +A + L  L HG+Q H  V  +G + + FI++AL+DMY+ 
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAK 593

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               K  A W+SMIS Y  HGK  EA+ +F  M ++ I P   + +S+
Sbjct: 594 CGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSV 653

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH G V++GLQ+YN+M   Y + P  EH+  +V +LGR+G+L EA EFI+ + I+P
Sbjct: 654 LSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRP 712

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              VW ++LSAC   G+ ++ K  AE+   ++P + G Y+ LSN++ + G W D
Sbjct: 713 AALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGD 766



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 186/679 (27%), Positives = 313/679 (46%), Gaps = 41/679 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S  LL +Y  +     +  LF +  N+++V+W+++++   +       L +F E     +
Sbjct: 78  SNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCV 137

Query: 70  -RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            + +   L  I+ A  Q +  + G  VH   IK+G   D  +    V +YAK G+++ + 
Sbjct: 138 DKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKAR 197

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F G+     V+W  I++G   +   E  L  F  M  S    D   LSS + A + LG
Sbjct: 198 LVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLG 257

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK IHA  ++   E    VS  N LI  Y++CG ++A +  F  +  K+++SW  +
Sbjct: 258 YLKGGKQIHAYVLR--SETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTM 315

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  N    EA +L+ EM  M   +PD     ++++ C     L+ GR +H Y I+  
Sbjct: 316 IAGYMQNSYDWEAVELVGEMFRM-GWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVC 374

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L +D  + N+L+D YSK N+L  A+ +F+ +   + +V +N+MI G            +F
Sbjct: 375 LEHDNFVTNALIDMYSKCNALDDAKRVFDVVT-CHSVVYYNAMIEGYSRQGYLCGALEVF 433

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +EM       SF T +++L    +   L+  K IH   +K GFS +    +AL+ +Y  C
Sbjct: 434 QEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKC 493

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
             +  A  + +  + N D   WN +          +EA K +  + Q     P+  T   
Sbjct: 494 SCIRDARYVFEGTT-NKDIVVWNSLFSGYNLQLKSEEAFKLYSDL-QLSRERPNEFTFAA 551

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           + +A   L     G+  H   +K  +  D  + NAL+ MY +C  ++ A  +F S    +
Sbjct: 552 LTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKD 611

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
              WN MIS ++Q+     AL +F  +      PN ++ VS+LSAC+ +G +  G Q + 
Sbjct: 612 TACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYN 671

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +   G +         ++ Y         +S+++  G  G+  EA E   +M    IRP
Sbjct: 672 SMARYGIEPG-------IEHY---------ASVVTLLGRAGRLTEAREFIEKMT---IRP 712

Query: 654 TKSSVISLLSACSHSGLVD 672
                 SLLSAC   G V+
Sbjct: 713 AALVWRSLLSACRVFGNVE 731



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 274/560 (48%), Gaps = 23/560 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   TSL+  Y+     + +  +F     K  VTW A+IT   ++    + L  F
Sbjct: 172 GFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLF 231

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  +  D   L  I++A + +  LK G+ +H   +++    D S  NV ++ Y KC
Sbjct: 232 NLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKC 291

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + + +  F  +   + +SW T+++G + N+Y  + +    EM   G + D  + SS +
Sbjct: 292 GRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVL 351

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   +  L +G+ IH+  IK+  E   +  VTN+LI MYS+C  ++ A+R F  +TC  
Sbjct: 352 TSCGSVDALQHGRQIHSYVIKVCLEHDNF--VTNALIDMYSKCNALDDAKRVFDVVTCHS 409

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV +NA+I+G++  G    A ++  EM+L + V P   T V+L+ L A  L L+  + +H
Sbjct: 410 VVYYNAMIEGYSRQGYLCGALEVFQEMRL-KHVSPSFLTFVSLLGLSAALLCLQLSKQIH 468

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
           G  I+     D    ++L+D YSK + +  A  +F       D+V WNS+ SG       
Sbjct: 469 GLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTN-KDIVVWNSLFSGYNLQLKS 527

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +E   L S    S       T  A+  + +   SL  G+  H   +K+G  ++    NAL
Sbjct: 528 EEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNAL 587

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +    S   DT+CWN +I    Q+G  +EA++ F++M    N +P
Sbjct: 588 VDMYAKCGSVEEAEKIFSS-SVWKDTACWNSMISMYAQHGKVEEALRMFETMV-SNNINP 645

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
           + VT V+V+SAC ++    +G  L      +  G++  +++  +++T+ GR   +  A  
Sbjct: 646 NYVTFVSVLSACSHVGFVEDG--LQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEARE 703

Query: 528 VFES-CYNCNLCTWNCMISA 546
             E          W  ++SA
Sbjct: 704 FIEKMTIRPAALVWRSLLSA 723



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 28/360 (7%)

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           L + P  N  +S+ + + +HC  +  G   +    N L+H Y   G +  A +L  ++  
Sbjct: 46  LLLAPVSN--KSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP- 102

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           N +   W+ V+   TQ G+ ++A+  F    +      +   L ++I AC   +    G 
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGS 162

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +H   +KS  G D  V  +L+ +Y +  +I  A  VF+        TW  +I+ ++++ 
Sbjct: 163 QVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSG 222

Query: 552 AEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               +L+LF +L  E    P++  + SIL+AC+ LG L+ GKQIH +V     + +    
Sbjct: 223 RSEVSLQLF-NLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           + L+D Y+ C               K+  +W++MI+ Y  +   WEA+EL  EM   G +
Sbjct: 282 NVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWK 341

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEA 710
           P + +  S+L++C     +  G Q ++ +++   V  E ++ V   ++DM  +   L +A
Sbjct: 342 PDEYACSSVLTSCGSVDALQHGRQIHSYVIK---VCLEHDNFVTNALIDMYSKCNALDDA 398


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 236/739 (31%), Positives = 384/739 (51%), Gaps = 48/739 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIA--DSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           ++  +     + QG  VH  ++  G +   D  L    + MY KCG +  +   F GM  
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLSSAVAASACLGELSYG 193
               SWN ++   L +    + L  +R M     SG   D  +L+S + AS   G+   G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGF 252
             +H L +K G + S +V+  N+LI+MY++CG +++A R F  M   +DV SWN++I G 
Sbjct: 184 CEVHGLAVKHGLDRSTFVA--NALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGC 241

Query: 253 ALNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             NG F +A DL   MQ  R+V   +  T V ++ +C +   L  GR +H   ++   G 
Sbjct: 242 LQNGMFLQALDLFRGMQ--RAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKS--GS 297

Query: 312 DL-LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
           ++ +  N+L+  Y+K   +  A  +F  I    D +SWNSM+S     GL+ E +   S+
Sbjct: 298 EVNIQCNALLVMYTKCGRVDSALRVFREIDE-KDYISWNSMLSCYVQNGLYAEAIEFISE 356

Query: 366 F---SFSTLLAILPSCNSPES----LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
                F    A + S +S       L  GK +H + +K    ++T   N LM MY+ C  
Sbjct: 357 MLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRY 416

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  +  +  R+      S W  +I    Q+    EA++ F+   Q++    D + + +++
Sbjct: 417 IEYSAHVFDRMRIKDHIS-WTTIITCYAQSSRHIEALEIFRE-AQKEGIKVDPMMIGSIL 474

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC  LE     K LH  A+++ + LD  V+N +I +YG C ++  +  +FE+    ++ 
Sbjct: 475 EACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIV 533

Query: 539 TWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TW  MI+ ++ +     AL LF  ++    +P+ +++VSIL A   L  L  GK++HG +
Sbjct: 534 TWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFL 593

Query: 596 FHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAI 640
               F     I S+L+DMYS                CK    W++MI+A G HG G +AI
Sbjct: 594 IRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAI 653

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF  M  +G+ P   S ++LL ACSHS LV+EG  Y + M+  Y + P  EH+ C+VD+
Sbjct: 654 DLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDL 713

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGRSG+ +EAYEFIK++P++PK  VW ++L AC  H + ++    A  L +LEP+N G Y
Sbjct: 714 LGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNY 773

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + +SN++  +G+W +A E+
Sbjct: 774 VLVSNVFAEMGKWNNAKEV 792



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 192/736 (26%), Positives = 338/736 (45%), Gaps = 64/736 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA     T LL  Y        +  LF    ++ V +WNA+I A + +      L  +
Sbjct: 95  GFLA-----TKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVY 149

Query: 62  GEM---VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             M      G+  D  TL  ++ A       + G  VH L++K G+   + + N  + MY
Sbjct: 150 RAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMY 209

Query: 119 AKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           AKCG L+S+   F  MH   D  SWN+++SGCL N    + L  FR M  +    ++ + 
Sbjct: 210 AKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTT 269

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWG 236
              +     L +L+ G+ +HA  +K G E    V++  N+L+ MY++CG +++A R F  
Sbjct: 270 VGVLQVCTELAQLNLGRELHAALLKSGSE----VNIQCNALLVMYTKCGRVDSALRVFRE 325

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +SWN+++  +  NG + EA + + EM L    +PD A +V+L S       L  
Sbjct: 326 IDEKDYISWNSMLSCYVQNGLYAEAIEFISEM-LRGGFQPDHACIVSLSSAVGHLGWLLN 384

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+ VH YAI++ L  D  + N+LMD Y K   +  +  +F+ +  + D +SW ++I+   
Sbjct: 385 GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMR-IKDHISWTTIITCYA 443

Query: 354 ---------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     +F+E      +     + +IL +C+  E++   K +HC+ ++ G  +  +
Sbjct: 444 QSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVV 503

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             N ++ +Y  CG++  +  + + +    D   W  +I     +G   EA+  F  M Q 
Sbjct: 504 K-NRIIDIYGECGEVYHSLKMFETVEQK-DIVTWTSMINCYANSGLLNEALVLFAEM-QS 560

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +  PDSV LV+++ A G L    +GK +HG  ++    ++  + ++L+ MY  C  +  
Sbjct: 561 TDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSG 620

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  VF +    ++  W  MI+A   +    +A++LF+ +      P+ +S +++L AC+ 
Sbjct: 621 ALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSH 680

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSS----MISAYGYHGKGW 637
             ++  GK                     LDM  +      W      ++   G  G+  
Sbjct: 681 SKLVNEGK-------------------CYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTE 721

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVC 696
           EA E    M    ++P      SLL AC      +  +   N +LE   + P+   ++V 
Sbjct: 722 EAYEFIKSM---PLKPKSVVWCSLLGACRVHKNHELAVVAANRLLE---LEPDNPGNYVL 775

Query: 697 IVDMLGRSGKLQEAYE 712
           + ++    GK   A E
Sbjct: 776 VSNVFAEMGKWNNAKE 791



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 164/615 (26%), Positives = 290/615 (47%), Gaps = 31/615 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
            + +L+  Y+     +S++ +F    + +DV +WN+MI+ C++N   +  L  F  M   
Sbjct: 201 VANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRA 260

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +  +S T + ++   T++  L  GR +H   +K+G   +   CN  + MY KCG ++S+
Sbjct: 261 VLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSA 319

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN---VSLSSAVAAS 184
              F  +   D +SWN+++S  + N    + + +  EM   G Q D+   VSLSSAV   
Sbjct: 320 LRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH- 378

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             LG L  GK +HA  IK   +      V N+L+ MY +C  IE +   F  M  KD +S
Sbjct: 379 --LGWLLNGKEVHAYAIKQRLDSD--TQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHIS 434

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  II  +A + +  EA ++  E Q    ++ D   + +++  C+    +   + +H YA
Sbjct: 435 WTTIITCYAQSSRHIEALEIFREAQ-KEGIKVDPMMIGSILEACSGLETILLAKQLHCYA 493

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEM 359
           IR  L  DL++ N ++D Y +   +  +  +F  +    D+V+W SMI     SGL  E 
Sbjct: 494 IRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETV-EQKDIVTWTSMINCYANSGLLNEA 551

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L L ++   +        L++IL +     SL  GK +H + ++  F      V++L+ M
Sbjct: 552 LVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDM 611

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A  +   +    D   W  +I A   +GH ++AI  FK M  Q   +PD V
Sbjct: 612 YSGCGSLSGALKVFNAVK-CKDMVLWTAMINATGMHGHGKQAIDLFKRML-QTGVTPDHV 669

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKSASTVFES 531
           + + ++ AC + +L  EGK    + + +      +   A ++ + GR    + A    +S
Sbjct: 670 SFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKS 729

Query: 532 C-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEP-NEISIVSILSACTQLGVLRHG 588
                    W  ++ A   +K  E+  +   R LE EP N  + V + +   ++G   + 
Sbjct: 730 MPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNA 789

Query: 589 KQIHGHVFHLGFQEN 603
           K++   +   G +++
Sbjct: 790 KEVRARISERGLRKD 804



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 83/177 (46%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  L     ++  Y        SL +F     KD+VTW +MI     +  +   L  
Sbjct: 495 RNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVL 554

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM    ++ DS  L+ I+ A+  ++ L +G+ VH   I+     + ++ +  V+MY+ 
Sbjct: 555 FAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSG 614

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           CG L+ +   F+ + C D V W  +++    + + ++ +  F+ M  +G   D+VS 
Sbjct: 615 CGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSF 671


>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
 gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
          Length = 870

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 249/823 (30%), Positives = 419/823 (50%), Gaps = 107/823 (13%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
            WN MI+ C                     R D   +  I+ +   ++ +K GR +H   
Sbjct: 8   AWNTMISDC-----------------NGDFRQDYQAVASILKSCAGLSAIKWGRALHGSI 50

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM---HCADTVSWNTIMSGCLHNN-YP 155
           ++ G ++  ++    +NMYAKCG L+ S+  F  +   +  D + WN ++SG   +  Y 
Sbjct: 51  VRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYD 110

Query: 156 EKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            + L  FREM G +  +  +V+ +  +   A LG++  G+ ++   IK G +   +    
Sbjct: 111 AETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLD--THTLAG 168

Query: 215 NSLISMYSQCGDI-EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           N+L+SMY++CG + + A  AF  +  KDVVSWNAII GFA N   E+AF L   M L   
Sbjct: 169 NALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSM-LKGQ 227

Query: 274 VEPDIATVVTLISLCA---DSLLLREGRSVHGYAIR--RLLGYDLLMMNSLMDFYSKSNS 328
           ++P+  T+  ++ +CA   + +    G+ +HGY +R   LL  D+ + N+L+ FY +   
Sbjct: 228 IKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLA-DVFVWNALVSFYLRVGR 286

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL-CSQFSFSTLLAIL 375
           + +AELLF  +  + DLVSWN++I+G            LF E+L L   +    TLL I+
Sbjct: 287 VEEAELLFRRM-ELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCII 345

Query: 376 PSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           P+C    +L  GK IH + L+  L   + ++G NAL+  Y  C D+  A+     IS   
Sbjct: 346 PACAQSRNLHVGKMIHGYVLRHPLLCEDTSVG-NALVSFYAKCDDIEGAYETFFMISRR- 403

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN ++ A  ++G+    ++  + M  +   +PDSVT+++V+  C N+    + K  
Sbjct: 404 DLISWNSMLDALVESGYNTWFLELLRWMLSE-GTTPDSVTILSVVHFCVNVLKEDKVKEA 462

Query: 494 HGLALK-----SLMGLDTRVQNALITMYGRCRDIKSASTVFESC---------------- 532
           H  +++     S   ++  + NA++  Y +C +I+ AS VF+S                 
Sbjct: 463 HSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGY 522

Query: 533 YNC----------------NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIV 573
            NC                +L  WN M+  +++N    +AL LF  L+    +P+ ++I+
Sbjct: 523 INCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIM 582

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           S+L AC ++  ++  KQ HG+     F +   +  AL D+Y+ C               K
Sbjct: 583 SLLPACAEMASVQLIKQCHGYAIRSCFGD-LHLDGALQDVYAKCGSIGYAFKLFQLIPNK 641

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
               +++MI  Y  HG G EA+  F  M   GI+P    + ++LSACSH+GLVDEGL  +
Sbjct: 642 DLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIF 701

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
            ++ + + ++   E + C+VD+L R G++ +A+  +  +PI+    +WG +L AC  H +
Sbjct: 702 YSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHE 761

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++G+ VA+ LFK+E EN+G Y+ LSN+Y A  RW   +EI K
Sbjct: 762 VELGRFVADRLFKIEAENIGNYVVLSNLYAADARWDGVMEIRK 804



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 287/638 (44%), Gaps = 72/638 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYF-ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G   H     +L++ Y+      + + A F     KDVV+WNA+I+   EN  +      
Sbjct: 160 GLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRL 219

Query: 61  FGEMVEEGIRFDSTTL---LIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVN 116
           F  M++  I+ + TTL   L + ++  +      G+ +H   ++   ++AD  + N  V+
Sbjct: 220 FSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVS 279

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNV 175
            Y + G +  +E  F  M   D VSWN I++G   N    K L  F E +     + D+V
Sbjct: 280 FYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSV 339

Query: 176 SLSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +L   + A A    L  GK+IH   ++  L  ED+   SV N+L+S Y++C DIE A   
Sbjct: 340 TLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDT---SVGNALVSFYAKCDDIEGAYET 396

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F+ ++ +D++SWN+++D    +G      +LL  M L     PD  T+++++  C + L 
Sbjct: 397 FFMISRRDLISWNSMLDALVESGYNTWFLELLRWM-LSEGTTPDSVTILSVVHFCVNVLK 455

Query: 294 LREGRSVHGYAIR-RLLG--YDL--LMMNSLMDFYSKSNSLSKAELLFNAIA-------- 340
             + +  H Y+IR RLL   +D+   + N+++D Y+K  ++  A  +F +++        
Sbjct: 456 EDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTF 515

Query: 341 -----------------------PMNDLVSWNSMIS------------GLFKEMLYLCSQ 365
                                  P +DL  WN M+             GLF E+     +
Sbjct: 516 KAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIK 575

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               T++++LP+C    S++  K  H + ++  F +  +   AL  +Y  CG +  AF L
Sbjct: 576 PDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCFGDLHLD-GALQDVYAKCGSIGYAFKL 634

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            Q I  N D   +  +I     +G  +EA+ TF  M  +    PD V +  V+SAC +  
Sbjct: 635 FQLIP-NKDLIIFTAMIRGYAMHGMGKEALGTFFHMI-ELGIKPDHVIITTVLSACSHAG 692

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           L  EG ++   +++ + G+   ++       L+   GR  D  S  T      N N+  W
Sbjct: 693 LVDEGLNIF-YSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANI--W 749

Query: 541 NCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
             ++ A  + ++ E+      R  + E   I    +LS
Sbjct: 750 GTLLGACRTHHEVELGRFVADRLFKIEAENIGNYVVLS 787



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 2/151 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R     L    +L   Y+       +  LF    NKD++ + AMI     +      L  
Sbjct: 606 RSCFGDLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGT 665

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+E GI+ D   +  ++SA +    + +G  + + +    GM       +  V++ A
Sbjct: 666 FFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLA 725

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           + G ++ +    +GM   A+   W T++  C
Sbjct: 726 RGGRIDDAFSMVTGMPIEANANIWGTLLGAC 756


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 239/779 (30%), Positives = 405/779 (51%), Gaps = 64/779 (8%)

Query: 36  KDVVTWNAMIT--ACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           KD   WN++I   A ++N   +  L  + +M   G+  ++TTL +++ A    N +++G+
Sbjct: 23  KDPKHWNSVIKHQANLKNDQAI--LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 80

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H       ++ D  +    V+ Y KCG +  + C F  M   D V WN ++ G +   
Sbjct: 81  SIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWG 140

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS-PYVS 212
             E+ +L  REMG    + ++ ++ + + A     EL  G+ +H   ++ G  DS P+V+
Sbjct: 141 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 200

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              +LI  Y +  D+      F  M  +++VSWNA+I G+   G + +A +L  +M L+ 
Sbjct: 201 T--ALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM-LVD 256

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            V+ D  T++  +  CA+   L+ G+ +H  AI+     DL ++N+L++ YS + SL  +
Sbjct: 257 EVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESS 316

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             LF ++ P  D   WNSMIS             LF  M     +    T++ +L  C  
Sbjct: 317 HQLFESV-PNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 375

Query: 381 PES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMY--INCGDLVAAFSLLQRISHNSDTSC 437
             S L  GKS+H   +K G   +    NAL+ MY  +NC + V    +  R+    D   
Sbjct: 376 LASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ--KIFDRMK-GVDIIS 432

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I+A  +N    +A + F+ M + +   P+S T++++++AC ++     G+S+HG  
Sbjct: 433 WNTMILALARNTLRAQACELFERMRESE-IKPNSYTIISILAACEDVTCLDFGRSIHGYV 491

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K  + ++  ++ AL  MY  C D  +A  +FE C + +L +WN MI             
Sbjct: 492 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX------------ 539

Query: 558 ELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS--SALLDMYS 615
                 + EPN ++I+++LS+ T L  L  G+ +H +V   GF     +S  +A + MY+
Sbjct: 540 ------KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYA 593

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               ++  +W++MI+ YG +G+G +A+  F +M   G RP   + +S
Sbjct: 594 RCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVS 653

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +LSACSHSG ++ GLQ +++M+++++V PE  H+ CIVD+L R G + EA EFI ++PI+
Sbjct: 654 VLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIE 713

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P   VW A+LS+C  + D K  K + E L KLEP N G Y+ LSN+Y   G W +   I
Sbjct: 714 PDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRI 772



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 227/501 (45%), Gaps = 43/501 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+  L    +LL  YSN    ESS  LF    N+D   WN+MI+A     C    +  F 
Sbjct: 293 FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFI 352

Query: 63  EMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M  EG++ D  T++I++S   ++ + L +G+ +H   IK+GM  D+SL N  ++MY + 
Sbjct: 353 RMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTEL 412

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + S +  F  M   D +SWNT++     N    +    F  M  S  + ++ ++ S +
Sbjct: 413 NCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISIL 472

Query: 182 AASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           AA   +  L +G+ IH   +K   E + P   +  +L  MY  CGD   A   F G   +
Sbjct: 473 AACEDVTCLDFGRSIHGYVMKHSIEINQP---LRTALADMYMNCGDEATARDLFEGCPDR 529

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SWNA+I                         EP+  T++ ++S       L +G+S+
Sbjct: 530 DLISWNAMI----------------------XKAEPNSVTIINVLSSFTHLATLPQGQSL 567

Query: 301 HGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           H Y  RR   LG DL + N+ +  Y++  SL  AE +F  + P  +++SWN+MI+G    
Sbjct: 568 HAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTL-PKRNIISWNAMIAGYGMN 626

Query: 356 ---------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIG 405
                    F +ML    + +  T +++L +C+    +E G  + H        +   + 
Sbjct: 627 GRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVH 686

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            + ++ +    G +  A   +  +    D S W  ++ +C      ++A   F+ + + +
Sbjct: 687 YSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLE 746

Query: 466 NASPDSVTLVNVISACGNLEL 486
             +  +  L++ + A   L L
Sbjct: 747 PMNAGNYVLLSNVYATAGLWL 767


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 224/729 (30%), Positives = 372/729 (51%), Gaps = 46/729 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSS---LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           + +GR +H  ++  G + D     L    + MY KCG L  +   F GM      SWN +
Sbjct: 71  VSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNAL 130

Query: 146 MSGCLHNNYPEKCLLYFREMGWS----GEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           +  CL +    + +  +R M  S    G   D  +L+S + A    G+   G  +H L +
Sbjct: 131 IGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAV 190

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEE 260
           K G + S  V+  N+L+ MY++CG +++A R F W    +DV SWN+ I G   NG F E
Sbjct: 191 KSGLDRSTLVA--NALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLE 248

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A DL   MQ       +  T V ++ +CA+   L  GR +H   ++    +++   N+L+
Sbjct: 249 ALDLFRRMQ-SDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALL 306

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSF 368
             Y++   +  A  +F  I    D +SWNSM+S              F EM+        
Sbjct: 307 VMYARCGWVDSALRVFREIGD-KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDH 365

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           + ++++L +      L  G+ +H + +K    ++    N LM MYI C  +  +  +  R
Sbjct: 366 ACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDR 425

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +      S W  +I    Q+  + EAI  F++  Q++    D + + +++ AC  L+   
Sbjct: 426 MRIKDHVS-WTTIIACYAQSSRYSEAIGKFRT-AQKEGIKVDPMMMGSILEACSGLKSIS 483

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
             K +H  A+++ + LD  ++N +I +YG C ++  A  +FE     ++ TW  M++ F+
Sbjct: 484 LLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA 542

Query: 549 QNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           +N     A+ LF  +     +P+ +++V IL A   L  L  GK+IHG +    F     
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA 602

Query: 606 ISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + S+L+DMYS                CK    W++MI+A G HG G +AI +F  M  +G
Sbjct: 603 VVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETG 662

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           + P   S ++LL ACSHS LVDEG  Y + M+ +Y ++P  EH+ C+VD+LGRSG+ +EA
Sbjct: 663 VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEA 722

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           Y+FIK++P++PK  VW A+L AC  H + ++     + L +LEP+N G Y+ +SN++  +
Sbjct: 723 YKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEM 782

Query: 771 GRWKDAVEI 779
           G+W +  EI
Sbjct: 783 GKWNNVKEI 791



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 169/608 (27%), Positives = 291/608 (47%), Gaps = 33/608 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA     T LL  Y        +  LF     + V +WNA+I AC+ +      +  +
Sbjct: 93  GFLA-----TKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVY 147

Query: 62  GEMVEE----GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             M       G   D  TL  ++ A       + G  VH L++K+G+   + + N  V M
Sbjct: 148 RAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGM 207

Query: 118 YAKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           YAKCG L+S+   F  M    D  SWN+ +SGC+ N    + L  FR M   G   ++ +
Sbjct: 208 YAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYT 267

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
               +   A L +L++G+ +HA  +K G E   +    N+L+ MY++CG +++A R F  
Sbjct: 268 TVGVLQVCAELAQLNHGRELHAALLKCGTE---FNIQCNALLVMYARCGWVDSALRVFRE 324

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +SWN+++  +  N  + EA D   EM +     PD A +V+L+S       L  
Sbjct: 325 IGDKDYISWNSMLSCYVQNRLYAEAIDFFGEM-VQNGFNPDHACIVSLLSAVGHLGRLIN 383

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GR VH YA+++ L  DL + N+LMD Y K  S+  +  +F+ +  + D VSW ++I+   
Sbjct: 384 GREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMR-IKDHVSWTTIIACYA 442

Query: 357 KEMLYLCSQFSFST------------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           +   Y  +   F T            + +IL +C+  +S+   K +H + ++ G   + I
Sbjct: 443 QSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLI 501

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             N ++ +Y  CG++  A ++ + +    D   W  ++    +NG   EA+  F  M   
Sbjct: 502 LKNRIIDIYGECGEVCYALNIFEMLD-KKDIVTWTSMVNCFAENGLLHEAVALFGKML-N 559

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
               PDSV LV ++ A   L    +GK +HG  ++    ++  V ++L+ MY  C  +  
Sbjct: 560 AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 619

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  VF+     ++  W  MI+A   +    +A+ +F+ +      P+ +S +++L AC+ 
Sbjct: 620 ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679

Query: 582 LGVLRHGK 589
             ++  GK
Sbjct: 680 SKLVDEGK 687



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 236/495 (47%), Gaps = 37/495 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+   + +S+L +F E  +KD ++WN+M++  V+NR     + FFGEMV+ G   
Sbjct: 304 ALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNP 363

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D   ++ ++SA+  +  L  GR VH  ++K  + +D  + N  ++MY KC  +  S   F
Sbjct: 364 DHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVF 423

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D VSW TI++    ++   + +  FR     G + D + + S + A + L  +S
Sbjct: 424 DRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSIS 483

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             K +H+  I+ G  D   + + N +I +Y +CG++  A   F  +  KD+V+W ++++ 
Sbjct: 484 LLKQVHSYAIRNGLLD---LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNC 540

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA NG   EA  L  +M L   ++PD   +V ++   A    L +G+ +HG+ IR     
Sbjct: 541 FAENGLLHEAVALFGKM-LNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPV 599

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  +++SL+D YS   S++ A  +F+  A   D+V W +MI+             +FK M
Sbjct: 600 EGAVVSSLVDMYSGCGSMNYALKVFDE-AKCKDVVLWTAMINATGMHGHGKQAIYIFKRM 658

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGK----------SIHCWQLKLGFSNNTIGVNAL 409
           L         + LA+L +C+  + ++ GK           +  WQ       + +G    
Sbjct: 659 LETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLG---- 714

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
                  G    A+  ++ +     +  W  ++ AC  + + + A+     + + +  +P
Sbjct: 715 -----RSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNP 769

Query: 470 DSVTLV-NVISACGN 483
            +  LV NV +  G 
Sbjct: 770 GNYVLVSNVFAEMGK 784



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 5/287 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  L     ++  Y        +L +F     KD+VTW +M+    EN  +   +  
Sbjct: 494 RNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVAL 553

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FG+M+  GI+ DS  L+ I+ A+  ++ L +G+ +H   I+     + ++ +  V+MY+ 
Sbjct: 554 FGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSG 613

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +N +   F    C D V W  +++    + + ++ +  F+ M  +G   D+VS  + 
Sbjct: 614 CGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLAL 673

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +    +  GK    + +   Y+  P+      ++ +  + G  E A +    M  +
Sbjct: 674 LYACSHSKLVDEGKFYLDMMVS-KYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLE 732

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              V W A++    ++   E A  ++   +L+  +EPD      L+S
Sbjct: 733 PKSVVWCALLGACRIHKNHELA--MIATDKLL-ELEPDNPGNYVLVS 776


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 369/720 (51%), Gaps = 42/720 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  ++  G+     + N+ +++Y+K G +  +   F  +   D VSW  ++SG   N  
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +R+M  +G       LSS +++       + G++IHA G K G+    +V   
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG-- 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++I++Y +CG    AER F  M  +D V++N +I G A  G  E A ++  EMQ    +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGL 240

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  T+ +L++ CA    L++G  +H Y  +  +  D +M  SL+D Y K   +  A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 335 LFNAIAPMNDLVSWNSM------ISGLFKEMLYLC---------SQFSFSTLLAILPSCN 379
           +FN+ +   ++V WN M      I+ L K     C         +QF++     IL +C 
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP---CILRTCT 356

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               ++ G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W 
Sbjct: 357 CTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWT 415

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    Q+   ++A+  FK M Q+    PD++ L + IS C  +    +G  +H     
Sbjct: 416 SMIAGYVQHECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    D  + NAL+ +Y RC  I+ A + FE   + +  TWN ++S F+Q+     AL++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  ++    + N  + VS LSA   L  ++ GKQIH  V   G    + + +AL+ +Y  
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+++I++   HG+G EA++LF +M   GI+P   + I +
Sbjct: 595 CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGV 654

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L+ACSH GLV+EGL Y+ +M +EY +RP  +H+ C++D+ GR+G+L  A +FI+ +PI  
Sbjct: 655 LAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAA 714

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y    +W +  ++ K
Sbjct: 715 DAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRK 774



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/603 (28%), Positives = 288/603 (47%), Gaps = 21/603 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +      L+  YS       +  +F E   +D V+W AM++   +N      L  
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M   G+      L  ++S+ T+     QGR++H    K G  ++  + N  + +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG    +E  F  M   DTV++NT++SG     + E  L  F EM +SG   D V++SS 
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A LG+L  G  +H+   K G   S Y+ +  SL+ +Y +CGD+E A   F      
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGI-SSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN ++  F       ++F+L  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAA-GIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +++     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQHEC 426

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  FKEM           L + +  C    ++  G  IH      G+S +    NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+++Y  CG +  AFS  + I H  D   WN ++    Q+G  +EA+K F  M  Q    
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            +  T V+ +SA  NL    +GK +H   +K+    +T V NALI++YG+C   + A   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      N  +WN +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G++
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 586 RHG 588
             G
Sbjct: 665 EEG 667



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 186/380 (48%), Gaps = 12/380 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS   + E +  +      KDVV+W +MI   V++ C    L  F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + GI  D+  L   +S    +N ++QG  +H     +G   D S+ N  VN+YA+C
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +  +F  +   D ++WN ++SG   +   E+ L  F  M  SG + +  +  SA+
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA L E+  GK IHA  IK G+  S    V N+LIS+Y +CG  E A+  F  M+ ++
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGH--SFETEVGNALISLYGKCGSFEDAKMEFSEMSERN 612

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II   + +G+  EA DL  +M+    ++P+  T + +++ C+   L+ EG S  
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMK-KEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671

Query: 302 G-----YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y IR    +       ++D + ++  L +A+     +    D + W +++S   
Sbjct: 672 KSMSDEYGIRPRPDH----YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727

Query: 357 KEMLYLCSQFSFSTLLAILP 376
                   +F+   LL + P
Sbjct: 728 VHKNIEVGEFAAKHLLELEP 747


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 221/698 (31%), Positives = 368/698 (52%), Gaps = 59/698 (8%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N F+    K GDL  +   F GM   D VSWN ++S  +   + EK L+ ++ M   G  
Sbjct: 42  NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 101

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAA 230
               +L+S ++A + + +  +G   H + +K G + + +V   N+L+SMY++CG I +  
Sbjct: 102 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG--NALLSMYAKCGFIVDYG 159

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA- 289
            R F  ++  + VS+ A+I G A   K  EA  +   M   + V+ D   +  ++S+ A 
Sbjct: 160 VRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILSISAP 218

Query: 290 ----DSLLL----REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
               DSL        G+ +H  A+R   G DL + NSL++ Y+K+  ++ AEL+F A  P
Sbjct: 219 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF-AEMP 277

Query: 342 MNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
             ++VSWN MI G  +E                     S +S+EF   +       GF  
Sbjct: 278 EVNVVSWNIMIVGFGQEY-------------------RSDKSVEFLTRMR----DSGFQP 314

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N +   +++      GD+     +   I   S  S WN ++   +   H++EAI  F+ M
Sbjct: 315 NEVTCISVLGACFRSGDVETGRRIFSSIPQPS-VSAWNAMLSGYSNYEHYEEAISNFRQM 373

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q QN  PD  TL  ++S+C  L     GK +HG+ +++ +  ++ + + LI +Y  C  
Sbjct: 374 -QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 432

Query: 522 IKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSIL 576
           ++ +  +F+ C N  ++  WN MIS F  N  + +AL LFR +       PNE S  ++L
Sbjct: 433 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 492

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           S+C++L  L HG+Q HG V   G+  +SF+ +AL DMY  C               K+  
Sbjct: 493 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 552

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            W+ MI  YG++G+G EA+ L+ +M +SG +P   + +S+L+ACSHSGLV+ GL+  ++M
Sbjct: 553 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 612

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
              + + PE +H++CIVD LGR+G+L++A +  +  P +    +W  +LS+C  HGD  +
Sbjct: 613 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 672

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++VAE L +L+P++   Y+ LSN Y +L +W D+  +
Sbjct: 673 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 710



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 273/605 (45%), Gaps = 64/605 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           + LT    V     +  +F     +DVV+WN MI+  V        L  +  MV +G   
Sbjct: 43  AFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 102

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSECT 130
              TL  ++SA +++     G   H +++K G+  +  + N  ++MYAKCG + +     
Sbjct: 103 SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 162

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA----- 185
           F  +   + VS+  ++ G    N   + +  FR M   G Q D+V LS+ ++ SA     
Sbjct: 163 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC 222

Query: 186 -CLGEL---SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             L E+     GK IH L ++LG+    +++  NSL+ +Y++  D+  AE  F  M   +
Sbjct: 223 DSLSEIYGNELGKQIHCLALRLGFGGDLHLN--NSLLEIYAKNKDMNGAELIFAEMPEVN 280

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I GF    + +++ + L  M+     +P+  T ++++  C  S  +  GR + 
Sbjct: 281 VVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLGACFRSGDVETGRRI- 338

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
                                             F++I P   + +WN+M+SG       
Sbjct: 339 ----------------------------------FSSI-PQPSVSAWNAMLSGYSNYEHY 363

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F++M +   +   +TL  IL SC     LE GK IH   ++   S N+  V+ L
Sbjct: 364 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 423

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  C  +  +  +     +  D +CWN +I     N    +A+  F+ M Q     P
Sbjct: 424 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 483

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  +   V+S+C  L     G+  HGL +KS    D+ V+ AL  MY +C +I SA   F
Sbjct: 484 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 543

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           ++    N   WN MI  +  N     A+ L+R +     +P+ I+ VS+L+AC+  G++ 
Sbjct: 544 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 603

Query: 587 HGKQI 591
            G +I
Sbjct: 604 TGLEI 608



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 257/574 (44%), Gaps = 73/574 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYF-ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G   ++    +LL+ Y+   +  +  + +F      + V++ A+I        V+  +  
Sbjct: 134 GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQM 193

Query: 61  FGEMVEEGIRFDSTTLLIIVS---------ALTQMNCLKQGRVVHCLSIKAGMIADSSLC 111
           F  M E+G++ DS  L  I+S         +L+++   + G+ +HCL+++ G   D  L 
Sbjct: 194 FRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLN 253

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  + +YAK  D+N +E  F+ M   + VSWN ++ G       +K + +   M  SG Q
Sbjct: 254 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 313

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S + A    G++  G+                                     
Sbjct: 314 PNEVTCISVLGACFRSGDVETGR------------------------------------- 336

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  +    V +WNA++ G++    +EEA     +MQ  ++++PD  T+  ++S CA  
Sbjct: 337 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF-QNLKPDKTTLSVILSSCARL 395

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L  G+ +HG  IR  +  +  +++ L+  YS+   +  +E +F+      D+  WNSM
Sbjct: 396 RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSM 455

Query: 352 ISG------------LFKEM---LYLC-SQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           ISG            LF+ M     LC ++ SF+T   +L SC+   SL  G+  H   +
Sbjct: 456 ISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT---VLSSCSRLCSLLHGRQFHGLVV 512

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K G+ +++    AL  MY  CG++ +A      +    +T  WN +I     NG   EA+
Sbjct: 513 KSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK-NTVIWNEMIHGYGHNGRGDEAV 571

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALI 513
             ++ M       PD +T V+V++AC +  L   G  +   +++ + G++  + +   ++
Sbjct: 572 GLYRKMI-SSGEKPDGITFVSVLTACSHSGLVETGLEILS-SMQRIHGIEPELDHYICIV 629

Query: 514 TMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
              GR   ++ A  + E+  Y  +   W  ++S+
Sbjct: 630 DCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 663



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 179/427 (41%), Gaps = 67/427 (15%)

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           +G  ++T   N L+ +YI CGD   A  +   +S   D   WN  +    + G   EA +
Sbjct: 1   MGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR-DVYSWNAFLTFRCKVGDLGEACE 59

Query: 457 TFKSMTQQQNAS------------------------------PDSVTLVNVISACGNLEL 486
            F  M ++   S                              P   TL +V+SAC  +  
Sbjct: 60  VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLD 119

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS-ASTVFESCYNCNLCTWNCMIS 545
              G   HG+A+K+ +  +  V NAL++MY +C  I      VFES    N  ++  +I 
Sbjct: 120 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIG 179

Query: 546 AFSQNKAEVRALELFRHL---EFEPNEISIVSILS------ACTQLGVL---RHGKQIHG 593
             ++    + A+++FR +     + + + + +ILS       C  L  +     GKQIH 
Sbjct: 180 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC 239

Query: 594 HVFHLGFQENSFISSALLDMYSNCKS-NAA--------------WSSMISAYGYHGKGWE 638
               LGF  +  ++++LL++Y+  K  N A              W+ MI  +G   +  +
Sbjct: 240 LALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDK 299

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           ++E    M +SG +P + + IS+L AC  SG V+ G + ++++ +     P       ++
Sbjct: 300 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAML 354

Query: 699 DMLGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
                    +EA    + +  Q   P       +LS+C+     + GKQ+  ++ + E  
Sbjct: 355 SGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEIS 414

Query: 756 NVGYYIS 762
              + +S
Sbjct: 415 KNSHIVS 421



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 21/292 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + L+  YS     E S  +F +  N+ D+  WN+MI+    N      L  F  M +  +
Sbjct: 421 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 480

Query: 70  R-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              + T+   ++S+ +++  L  GR  H L +K+G ++DS +     +MY KCG+++S+ 
Sbjct: 481 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 540

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   +TV WN ++ G  HN   ++ +  +R+M  SGE+ D ++  S + A +  G
Sbjct: 541 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 600

Query: 189 ELSYG-------KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
            +  G       + IH +  +L +    Y+ + + L     + G +E AE+       K 
Sbjct: 601 LVETGLEILSSMQRIHGIEPELDH----YICIVDCL----GRAGRLEDAEKLAEATPYKS 652

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
             V W  ++    ++G    A  +    +LMR ++P  +    L+S    SL
Sbjct: 653 SSVLWEILLSSCRVHGDVSLARRVAE--KLMR-LDPQSSAAYVLLSNTYSSL 701


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 226/694 (32%), Positives = 359/694 (51%), Gaps = 38/694 (5%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCG +  +E  F  M      +WN +M G + N      L  +REM   G   D+ +
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
               + A   + +L  G  IH L IK G +   +V V NSL+++Y++C DI  A + F  
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCD--SFVFVVNSLVALYAKCNDINGARKLFDR 118

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M  + DVVSWN+II  ++ NG   EA  L  EM L   V  +  T    +  C DS  ++
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEM-LKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            G  +H   ++     D+ + N+L+  Y +   + +A ++F  +    D+V+WNSM++G 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEG-KDIVTWNSMLTGF 236

Query: 356 FKEMLYLCS-QFSFS-----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            +  LY  + +F +            ++++I+ +      L  GK IH + +K GF +N 
Sbjct: 237 IQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI 296

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +  N L+ MY  C  +         ++H  D   W        QN  + +A++  + + Q
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHK-DLISWTTAAAGYAQNKCYLQALELLRQL-Q 354

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            +    D+  + +++ AC  L    + K +HG  ++  +  D  +QN +I +YG C  I 
Sbjct: 355 MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGIID 413

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACT 580
            A  +FES    ++ +W  MIS +  N    +ALE+F  ++    EP+ +++VSILSA  
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------WSS 625
            L  L+ GK+IHG +   GF     IS+ L+DMY+ C S                  W++
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTA 533

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MISAYG HG G  A+ELF  M +  I P   + ++LL ACSHSGLV+EG  +   M  EY
Sbjct: 534 MISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEY 593

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  EH+ C+VD+LGR   L+EAY+ +K++  +P P VW A+L AC  H + ++G+  
Sbjct: 594 QLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVA 653

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           AE L +L+ +N G Y+ +SN++ A GRWKD  E+
Sbjct: 654 AEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEV 687



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 168/577 (29%), Positives = 288/577 (49%), Gaps = 23/577 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   + + TWNAM+   V N   +  L  + EM   G+ FDS T  +++ A   +  
Sbjct: 14  IFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVED 73

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA-DTVSWNTIMS 147
           L  G  +H L+IK G  +   + N  V +YAKC D+N +   F  M+   D VSWN+I+S
Sbjct: 74  LFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIIS 133

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
               N    + L  F EM  +G   +  + ++A+ A      +  G  IHA  +K G   
Sbjct: 134 AYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVL 193

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             YV+  N+L++MY + G +  A   F  +  KD+V+WN+++ GF  NG + EA +  ++
Sbjct: 194 DVYVA--NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYD 251

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           +Q    ++PD  +++++I        L  G+ +H YAI+     ++L+ N+L+D Y+K  
Sbjct: 252 LQ-NADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCC 310

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS------------QFSFSTLLAIL 375
            +S     F+ +A   DL+SW +  +G  +   YL +                + + +IL
Sbjct: 311 CMSYGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C     L   K IH + ++ G S+  +  N ++ +Y  CG +  A  + + I    D 
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGGLSDPVLQ-NTIIDVYGECGIIDYAVRIFESI-ECKDV 427

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W  +I     NG   +A++ F SM ++    PD VTLV+++SA  +L    +GK +HG
Sbjct: 428 VSWTSMISCYVHNGLANKALEVFSSM-KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHG 486

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             ++    L+  + N L+ MY RC  ++ A  +F    N NL  W  MISA+  +     
Sbjct: 487 FIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEA 546

Query: 556 ALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
           A+ELF  ++ E   P+ I+ +++L AC+  G++  GK
Sbjct: 547 AVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK 583



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 249/495 (50%), Gaps = 20/495 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           SL+  Y+  +    +  LF       DVV+WN++I+A   N      L  F EM++ G+ 
Sbjct: 98  SLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVV 157

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ T    + A    + +K G  +H   +K+G + D  + N  V MY + G +  +   
Sbjct: 158 TNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVI 217

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D V+WN++++G + N    + L +F ++  +  + D VS+ S + AS  LG L
Sbjct: 218 FGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYL 277

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IHA  IK G++ +  + V N+LI MY++C  +    RAF  M  KD++SW     
Sbjct: 278 LNGKEIHAYAIKNGFDSN--ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAA 335

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A N  + +A +LL ++Q M  ++ D   + +++  C     L + + +HGY IR  L 
Sbjct: 336 GYAQNKCYLQALELLRQLQ-MEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS 394

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
            D ++ N+++D Y +   +  A  +F +I    D+VSW SMIS     GL  + L + S 
Sbjct: 395 -DPVLQNTIIDVYGECGIIDYAVRIFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSS 452

Query: 366 F-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
                    + TL++IL +  S  +L+ GK IH + ++ GF       N L+ MY  CG 
Sbjct: 453 MKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGS 512

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A+ +    + N +   W  +I A   +G+ + A++ F  M + +   PD +T + ++
Sbjct: 513 VEDAYKIFT-CTKNRNLILWTAMISAYGMHGYGEAAVELFMRM-KDEKIIPDHITFLALL 570

Query: 479 SACGNLELAFEGKSL 493
            AC +  L  EGKS 
Sbjct: 571 YACSHSGLVNEGKSF 585



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 231/500 (46%), Gaps = 27/500 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  + +L+  Y        +  +F     KD+VTWN+M+T  ++N      L FF
Sbjct: 190 GRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            ++    ++ D  +++ I+ A  ++  L  G+ +H  +IK G  ++  + N  ++MYAKC
Sbjct: 250 YDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC 309

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++     F  M   D +SW T  +G   N    + L   R++   G   D   + S +
Sbjct: 310 CCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSIL 369

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L  L   K IH   I+ G  D     + N++I +Y +CG I+ A R F  + CKD
Sbjct: 370 LACRGLNCLGKIKEIHGYTIRGGLSDPV---LQNTIIDVYGECGIIDYAVRIFESIECKD 426

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW ++I  +  NG   +A ++   M+    +EPD  T+V+++S       L++G+ +H
Sbjct: 427 VVSWTSMISCYVHNGLANKALEVFSSMK-ETGLEPDYVTLVSILSAVCSLSTLKKGKEIH 485

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ IR+    +  + N+L+D Y++  S+  A  +F      N L+ W +MIS        
Sbjct: 486 GFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN-LILWTAMISAYGMHGYG 544

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS----IHC-WQLKLGFSNNTI 404
                LF  M          T LA+L +C+    +  GKS    + C +QL+    + T 
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTC 604

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            V+ L     NC  L  A+ +++ + +      W  ++ AC  + + +      + + + 
Sbjct: 605 LVDLLGRR--NC--LEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLEL 660

Query: 465 QNASPDSVTLV-NVISACGN 483
              +P +  LV NV +A G 
Sbjct: 661 DLDNPGNYVLVSNVFAANGR 680



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG L+      +++  Y      + ++ +F     KDVV+W +MI+  V N      L  
Sbjct: 390 RGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEV 449

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E G+  D  TL+ I+SA+  ++ LK+G+ +H   I+ G I + S+ N  V+MYA+
Sbjct: 450 FSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYAR 509

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  +   F+     + + W  ++S    + Y E  +  F  M       D+++  + 
Sbjct: 510 CGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLAL 569

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           + A +  G ++ GK    + +K  Y+  P+      L+ +  +   +E A
Sbjct: 570 LYACSHSGLVNEGKSFLEI-MKCEYQLEPWPEHYTCLVDLLGRRNCLEEA 618


>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
 gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
          Length = 883

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 236/797 (29%), Positives = 411/797 (51%), Gaps = 60/797 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y      + ++ +F+    + + +WN +I A  +NR     +  F  M   GI+ D
Sbjct: 86  LLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPD 145

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCL----SIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           S TL  ++ A + +  L++GR +H        ++G++ ++ L    V MYA+CG L  + 
Sbjct: 146 SATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGL----VKMYARCGRLREAR 201

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D + WN++++      +  +      EM   G +A + + +  + A + L 
Sbjct: 202 EVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSLE 261

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           E   GK IH+  +  G   S  + V N+LISMY +C +++AA R F  +   DVVSW A+
Sbjct: 262 E---GKKIHSRALARGLSSS--IIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTAL 316

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +  +G+  EA +L  +M+    +EPD  T  +++S C+++  L  G+++H   + R 
Sbjct: 317 IVAYTQHGRNREALELYKQME-GEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARK 375

Query: 309 LGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--------M 359
            G+ D +++ +L++ Y K   L  +  +F +      +V WN+MI+   +E        +
Sbjct: 376 DGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDL 435

Query: 360 LYLCSQFSF----STLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYI 414
             +  Q       STL +IL +C   + LE G+ +H   +     S N + +NAL+ MY 
Sbjct: 436 YDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYA 495

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           +CG++  A ++ +R+  N D   W I+I A  Q G  + A++ ++ M  +    P  VT+
Sbjct: 496 SCGEIREAKAVFKRMK-NRDVVSWTILISAYVQGGDARRALRLYRRMLVE-GVQPTEVTM 553

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF----- 529
           + VI+AC  +E  +EG  +H L   S+   DT VQ ALI+MY RCR +  A  VF     
Sbjct: 554 LAVIAACSAMESLWEGIVIHALT-DSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRH 612

Query: 530 -ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
            ES  NC    WN M++A+SQ       + L+  +     + NE +    L+AC+ LG +
Sbjct: 613 LESSANC----WNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAV 668

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAYG 631
           R G +IH  V    +  +  + +AL+ MY+ C                  AW++MI+AY 
Sbjct: 669 REGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQLQPDVVAWNAMIAAYA 728

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G  W A+EL+ +M + G +P + + + +  AC H+GLVDE   Y+ +M+E+  + P  
Sbjct: 729 QNGYAWHALELYSKMLH-GYKPLEPTFLCVFLACGHAGLVDECKWYFQSMIEDR-ITPTF 786

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C+V +L R+GKL+EA + + ++P  P    W ++L AC  HGD K  ++ A+   +
Sbjct: 787 DHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAME 846

Query: 752 LEPENVGYYISLSNMYV 768
           L+ ++   Y+ LSN+ +
Sbjct: 847 LDRQDSAPYVLLSNVNI 863



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 197/684 (28%), Positives = 336/684 (49%), Gaps = 48/684 (7%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QGR +H   + +G+ +D  L +  + MY KCG ++ +   F  +      SWN I++ 
Sbjct: 61  LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAA 120

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N +  K +  FR M  +G + D+ +LSS + A + L +L  G+ IH   I  G   S
Sbjct: 121 FAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGR-ISSGEFQS 179

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V   L+ MY++CG +  A   F  +  KDV+ WN++I  +A  G   +A  L  EM
Sbjct: 180 GIV-VETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEM 238

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V+    T   ++  C+    L EG+ +H  A+ R L   +++ N+L+  Y K N 
Sbjct: 239 EGF-GVKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSIIVQNALISMYGKCNE 294

Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAILP 376
           L  A  +F+ +   +D+VSW ++I      G  +E L L  Q           T  ++L 
Sbjct: 295 LDAARRVFSKVRA-HDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLS 353

Query: 377 SCNSPESLEFGKSIHCWQL--KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +C++   LE G+++H   L  K GFS+  + V AL++MY+ CG L  +  + Q       
Sbjct: 354 ACSNTNDLELGQALHARLLARKDGFSDGVL-VAALINMYVKCGRLDLSSEIFQSCKDTKA 412

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I A  Q G+ + A+  +  M +Q+   PD  TL +++SAC  L+   +G+ +H
Sbjct: 413 VVVWNAMITAYEQEGYSRAAVDLY-DMMKQRGLDPDESTLSSILSACAELKDLEKGEQVH 471

Query: 495 GLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
              + S     +  V NALI+MY  C +I+ A  VF+   N ++ +W  +ISA+ Q    
Sbjct: 472 VEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDA 531

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            RAL L+R +  E   P E++++++++AC+ +  L  G  IH     + F + + + +AL
Sbjct: 532 RRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGIVIHALTDSMFFTDTA-VQAAL 590

Query: 611 LDMYSNCK-----------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           + MY+ C+                 S   W++M++AY   G   E I L+ EM ++GI+ 
Sbjct: 591 ISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKA 650

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
            + +    L+ACS  G V EG + +  +        +      +V M  +  ++  A+  
Sbjct: 651 NEGTFAGALAACSMLGAVREGYRIHEQVSSSR-YSSDLSLKTALVHMYAKCNRVDAAFHV 709

Query: 714 IKNLPIQPKPGVWGAMLSACSHHG 737
            + L  QP    W AM++A + +G
Sbjct: 710 FEQL--QPDVVAWNAMIAAYAQNG 731



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 185/702 (26%), Positives = 327/702 (46%), Gaps = 53/702 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F + +   T L+  Y+       +  +F    NKDV+ WN+MI A  +            
Sbjct: 177 FQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCE 236

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM   G++   TT   I+ A +    L++G+ +H  ++  G+ +   + N  ++MY KC 
Sbjct: 237 EMEGFGVKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSIIVQNALISMYGKCN 293

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           +L+++   FS +   D VSW  ++     +    + L  +++M   G + D V+ +S ++
Sbjct: 294 ELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLS 353

Query: 183 ASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           A +   +L  G+ +HA  L  K G+ D   V+   +LI+MY +CG ++ +   F   +CK
Sbjct: 354 ACSNTNDLELGQALHARLLARKDGFSDGVLVA---ALINMYVKCGRLDLSSEIF--QSCK 408

Query: 241 D---VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D   VV WNA+I  +   G    A D L++M   R ++PD +T+ +++S CA+   L +G
Sbjct: 409 DTKAVVVWNAMITAYEQEGYSRAAVD-LYDMMKQRGLDPDESTLSSILSACAELKDLEKG 467

Query: 298 RSVHGYAI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
             VH   I  R    + +++N+L+  Y+    + +A+ +F  +    D+VSW  +IS   
Sbjct: 468 EQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKN-RDVVSWTILISAYV 526

Query: 357 K------------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           +             ML    Q +  T+LA++ +C++ ESL  G  IH     + F++  +
Sbjct: 527 QGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGIVIHALTDSMFFTDTAV 586

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              AL+ MY  C  L  A  + +++ H  S  +CWN ++ A +Q G  +E I+ +  M+ 
Sbjct: 587 QA-ALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMS- 644

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
                 +  T    ++AC  L    EG  +H     S    D  ++ AL+ MY +C  + 
Sbjct: 645 STGIKANEGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVD 704

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSACTQ 581
           +A  VFE     ++  WN MI+A++QN     ALEL+  +   ++P E + + +  AC  
Sbjct: 705 AAFHVFEQ-LQPDVVAWNAMIAAYAQNGYAWHALELYSKMLHGYKPLEPTFLCVFLACGH 763

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE 641
            G++   K          FQ  S I   +   + +      +S +++     GK  EA +
Sbjct: 764 AGLVDECKWY--------FQ--SMIEDRITPTFDH------YSCVVTVLSRAGKLEEAED 807

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           L H M      P      SLL AC   G +    +  +  +E
Sbjct: 808 LLHSM---PFNPGSVGWTSLLGACRTHGDLKRARRAADEAME 846



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/538 (27%), Positives = 254/538 (47%), Gaps = 44/538 (8%)

Query: 235 WGMTCKDVVSWNAIIDGFALN-GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           +G T + ++S  AIID    +  +     D LH +Q     +    T   L+  C ++  
Sbjct: 3   FGQTRRRLLS-TAIIDPPDTSLQRLARLDDDLHHLQFQSPFQVR-QTYAALLKHCGNAAA 60

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L +GR +H + +   L  D  + + L+  Y K  S+  A  +F+A+ P   L SWN +I+
Sbjct: 61  LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL-PRRSLFSWNFIIA 119

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        +F+ M     +   +TL ++L +C+S   LE G+ IH       F +
Sbjct: 120 AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQS 179

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
             +    L+ MY  CG L  A  +  RI  N D  CWN +I A  Q GH  +A +  + M
Sbjct: 180 GIVVETGLVKMYARCGRLREAREVFDRI-ENKDVICWNSMIAAYAQGGHSAQARQLCEEM 238

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 + D+ T   ++ AC +LE   EGK +H  AL   +     VQNALI+MYG+C +
Sbjct: 239 EGFGVKASDT-TFAGILGACSSLE---EGKKIHSRALARGLSSSIIVQNALISMYGKCNE 294

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           + +A  VF      ++ +W  +I A++Q+     ALEL++ +E    EP++++  S+LSA
Sbjct: 295 LDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSA 354

Query: 579 CTQLGVLRHGKQIHGHVFHL--GFQENSFISSALLDMYSNC----------------KSN 620
           C+    L  G+ +H  +     GF +   + +AL++MY  C                K+ 
Sbjct: 355 CSNTNDLELGQALHARLLARKDGFSDGVLV-AALINMYVKCGRLDLSSEIFQSCKDTKAV 413

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             W++MI+AY   G    A++L+  M   G+ P +S++ S+LSAC+    +++G Q +  
Sbjct: 414 VVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVE 473

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           ++   D          ++ M    G+++EA    K +  +     W  ++SA    GD
Sbjct: 474 IIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVS-WTILISAYVQGGD 530



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 155/622 (24%), Positives = 270/622 (43%), Gaps = 59/622 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + +    +L++ Y   +  +++  +F +    DVV+W A+I A  ++      L  
Sbjct: 273 RGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALEL 332

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC--LSIKAGMIADSSLCNVFVNMY 118
           + +M  EG+  D  T   ++SA +  N L+ G+ +H   L+ K G  +D  L    +NMY
Sbjct: 333 YKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDG-FSDGVLVAALINMY 391

Query: 119 AKCGDLNSSECTFSGMHCADT---VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            KCG L+ S   F    C DT   V WN +++      Y    +  +  M   G   D  
Sbjct: 392 VKCGRLDLSSEIFQS--CKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDES 449

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +LSS ++A A L +L  G+ +H + I    + S    V N+LISMY+ CG+I  A+  F 
Sbjct: 450 TLSSILSACAELKDLEKGEQVH-VEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFK 508

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  +DVVSW  +I  +   G    A  L   M L+  V+P   T++ +I+ C+    L 
Sbjct: 509 RMKNRDVVSWTILISAYVQGGDARRALRLYRRM-LVEGVQPTEVTMLAVIAACSAMESLW 567

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS-WNSMIS- 353
           EG  +H      +   D  +  +L+  Y++   L  A  +F  +  +    + WN+M++ 
Sbjct: 568 EGIVIHAL-TDSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAA 626

Query: 354 ----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
               GL +E + L  + S +       T    L +C+   ++  G  IH       +S++
Sbjct: 627 YSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSD 686

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                AL+HMY  C  + AAF + +++    D   WN +I A  QNG+   A++ +  M 
Sbjct: 687 LSLKTALVHMYAKCNRVDAAFHVFEQL--QPDVVAWNAMIAAYAQNGYAWHALELYSKML 744

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
                 P   T + V  ACG+  L  E K              + +++ +   +      
Sbjct: 745 --HGYKPLEPTFLCVFLACGHAGLVDECKWY----------FQSMIEDRITPTFDH---- 788

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
                            ++C+++  S+      A +L   + F P  +   S+L AC   
Sbjct: 789 -----------------YSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTH 831

Query: 583 GVLRHGKQIHGHVFHLGFQENS 604
           G L+  ++       L  Q+++
Sbjct: 832 GDLKRARRAADEAMELDRQDSA 853



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 174/367 (47%), Gaps = 52/367 (14%)

Query: 465 QNASPDSV--TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q  SP  V  T   ++  CGN     +G+ +H   + S +  D  + + L+ MYG+C  +
Sbjct: 37  QFQSPFQVRQTYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSV 96

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A  VF +    +L +WN +I+AF++N+   +A+E+FR ++    +P+  ++ S+L AC
Sbjct: 97  DDAIQVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGAC 156

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
           + L  L  G++IHG +    FQ    + + L+ MY+ C               K    W+
Sbjct: 157 SSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWN 216

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS--------HSGLVDEGLQ 676
           SMI+AY   G   +A +L  EM   G++ + ++   +L ACS        HS  +  GL 
Sbjct: 217 SMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSLEEGKKIHSRALARGLS 276

Query: 677 ----YYNNMLEEYDVRPETE-----------HHV----CIVDMLGRSGKLQEAYEFIKNL 717
                 N ++  Y    E +           H V     ++    + G+ +EA E  K +
Sbjct: 277 SSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQM 336

Query: 718 P---IQPKPGVWGAMLSACSHHGDTKMGKQV-AELLFKLEPENVGYYI-SLSNMYVALGR 772
               ++P    + ++LSACS+  D ++G+ + A LL + +  + G  + +L NMYV  GR
Sbjct: 337 EGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGR 396

Query: 773 WKDAVEI 779
              + EI
Sbjct: 397 LDLSSEI 403


>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
 gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
          Length = 934

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 243/799 (30%), Positives = 395/799 (49%), Gaps = 51/799 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+T Y        +  +F      + V WN+++ A +++  V   +  + EM++ G  
Sbjct: 145 SSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFL 204

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
               T L +++A++ +  L+ G++VH    +AG   D  +    VNMY KCG +  +   
Sbjct: 205 PSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEV 264

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D + W+ ++S  ++    E+ L  FR+M   G + +NV+L S ++A      L
Sbjct: 265 FDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQAL 324

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   ++ GYE    + V N+++SMY +CG +E A   F  +  + VV+ N ++ 
Sbjct: 325 ETGKGIHECVVEAGYEGD--LIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMG 382

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             A+ G    A  L   M +   +E D  T ++ +  C+ +  L  G   H   +   L 
Sbjct: 383 ACAVQGDSSGALKLFRYM-VHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLE 441

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI----------SGL--FKE 358
            D+ + N+L++ Y K   +  AE +F  + P  D+ +WN+MI          SGL  F+ 
Sbjct: 442 LDIFVANALVNMYGKCGKVEAAEHVFEEL-PEQDVRTWNAMILAYVQNEEERSGLLVFRH 500

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M+    +    T    L +C  P    F + +H    + G SN T+  NAL+ MY   G 
Sbjct: 501 MMQSGYKPDEVTFAITLNACYHPR---FLRDVHSLISETGISN-TVVQNALVVMYGRFGL 556

Query: 419 LVAAFSLLQRISHNSDTS-----------CWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           L   + + +++   S TS           CWN VI A  Q+G   EA+K F  M QQ   
Sbjct: 557 LEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRM-QQAGV 615

Query: 468 SPDSVTLVNVISACGNLELA-FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            PD  + V V+ A  N+ +   E   L  +   S +     + NALI+MYGRC     A 
Sbjct: 616 WPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKAR 675

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            +F+S    +  TWN M+S   Q +    +++LFR +  E   P++++I+++L+ C  L 
Sbjct: 676 DLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLP 735

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMIS 628
            L+ GK I   + H     N  I +A+L+MY+ C S                 +W+++I 
Sbjct: 736 ALQEGKAICVWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIG 795

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           AYG + +G  A ++F  M   G  P   +  ++LS CSH GL+ E ++++  M E+Y V 
Sbjct: 796 AYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVE 855

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
            ET H+ CIVD+LGR G++ EA E  + +P    P VW  +LSAC  HG+T+ GK+ AE 
Sbjct: 856 AETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAER 915

Query: 749 LFKLEPENVGYYISLSNMY 767
           L +L+PE    Y+ LS +Y
Sbjct: 916 LVELDPEVTSAYVVLSTIY 934



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 182/697 (26%), Positives = 328/697 (47%), Gaps = 63/697 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM---HCADTVSWNTI 145
           L +GR +H    ++    D  + N  + MY KCG L  +   F  +      + V+W  +
Sbjct: 21  LARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTAL 80

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           ++    N   +  +  F++M   G   D ++L +   A      L  GK IHA       
Sbjct: 81  IAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAY-----L 135

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
             +  V + +SLI+MY +CG +  A   F  M   + V+WN+++  F  + + EEA +L 
Sbjct: 136 SCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQHDRVEEAMELY 195

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM L     P   T +T+++  +    LR G+ VH          D+++  +L++ Y K
Sbjct: 196 WEM-LQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGK 254

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             S+ +A  +F+ + P +D++ W+++IS             LF++M    ++ +  TL++
Sbjct: 255 CGSVVEAVEVFDRM-PRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVS 313

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C  P++LE GK IH   ++ G+  + I  NA++ MY  CG L  A+ +  R+   S
Sbjct: 314 VLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRS 373

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             +C N ++ AC   G    A+K F+ M   +    D++T ++ + AC        G+  
Sbjct: 374 VVTC-NGMMGACAVQGDSSGALKLFRYMV-HEGIEFDNITFLSALCACSGTSGLSHGEFF 431

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   L+  + LD  V NAL+ MYG+C  +++A  VFE     ++ TWN MI A+ QN+ E
Sbjct: 432 HARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEE 491

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
              L +FRH+    ++P+E++    L+AC     LR    +H  +   G   N+ + +AL
Sbjct: 492 RSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLR---DVHSLISETGIS-NTVVQNAL 547

Query: 611 LDMY----------------------------SNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           + MY                            ++C +   W+S+I A+   G+  EA+++
Sbjct: 548 VVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASC-AQTCWNSVIFAHVQSGRDSEALKM 606

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F  M  +G+ P K+S ++++ A S+ G+ +  + +   ++   DV         ++ M G
Sbjct: 607 FWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYG 666

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH--HG 737
           R G   +A +   ++  +     W  M+S      HG
Sbjct: 667 RCGSFGKARDLFDSMA-ERDAVTWNTMMSVSEQLEHG 702



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 203/790 (25%), Positives = 363/790 (45%), Gaps = 75/790 (9%)

Query: 29  LFY---ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ 85
           +FY   ET   ++V W A+I A   N    + +  F +M  EG   D  TL+ I  A   
Sbjct: 62  VFYQLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGN 121

Query: 86  MNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
              L+ G+ +H  LS  + ++  SSL    + MY KCG L+ +   F  M   +TV+WN+
Sbjct: 122 PENLEDGKKIHAYLSCNSDVVLGSSL----ITMYGKCGSLSEACLMFQSMEEWNTVAWNS 177

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +M   + ++  E+ +  + EM   G      +  + +AA + L  L +GK++H    + G
Sbjct: 178 LMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAG 237

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           +ED   V V  +L++MY +CG +  A   F  M   DV+ W+A+I       ++EE+  L
Sbjct: 238 HEDD--VVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRL 295

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
             +MQL     P+  T+V+++S C     L  G+ +H   +      DL++ N+++  Y 
Sbjct: 296 FRKMQL-EGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYG 354

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K  SL  A  +F+ + P   +V+ N M+              LF+ M++   +F   T L
Sbjct: 355 KCGSLEDAWDVFHRV-PRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFL 413

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           + L +C+    L  G+  H   L+ G   +    NAL++MY  CG + AA  + + +   
Sbjct: 414 SALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQ 473

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN +I+A  QN   +  +  F+ M  Q    PD VT    ++AC +       + 
Sbjct: 474 -DVRTWNAMILAYVQNEEERSGLLVFRHM-MQSGYKPDEVTFAITLNACYHPRFL---RD 528

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS------- 545
           +H L  ++ +  +T VQNAL+ MYGR   ++    VFE     ++ +WN MI+       
Sbjct: 529 VHSLISETGIS-NTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCW 587

Query: 546 -----AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG-KQIHGHVF 596
                A  Q+  +  AL++F  ++     P++ S V+++ A + +G+       +   + 
Sbjct: 588 NSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIA 647

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
           +   ++   I +AL+ MY  C               +    W++M+S       G ++I+
Sbjct: 648 NSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQ 707

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---CIV 698
           LF +M   G  P K +++++L+ C+    + EG      +    D  P + + +    I+
Sbjct: 708 LFRQMLQEGTPPDKVTILTVLNVCASLPALQEG----KAICVWLDHTPLSANQMIGNAIL 763

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLE---P 754
           +M  + G   EA      +  Q +  V W A++ A   +   +   Q+ + + +LE   P
Sbjct: 764 NMYAKCGSRDEARRIFSVM--QGRDAVSWNALIGAYGSYSRGRYAFQIFQAM-QLEGSTP 820

Query: 755 ENVGYYISLS 764
           + V +   LS
Sbjct: 821 DAVTFTTILS 830



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 158/609 (25%), Positives = 267/609 (43%), Gaps = 48/609 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L    ++++ Y      E +  +F+    + VVT N M+ AC         L  F
Sbjct: 338 GYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLF 397

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MV EGI FD+ T L  + A +  + L  G   H   ++ G+  D  + N  VNMY KC
Sbjct: 398 RYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKC 457

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + ++E  F  +   D  +WN ++   + N      LL FR M  SG + D V+   A+
Sbjct: 458 GKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTF--AI 515

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             +AC     + + +H+L  + G  ++    V N+L+ MY + G +E   + F  +  + 
Sbjct: 516 TLNACY-HPRFLRDVHSLISETGISNT---VVQNALVVMYGRFGLLEEGYQVFEKLDQES 571

Query: 242 VVSWNAIIDGFA------------LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           + SWN +I   A             +G+  EA  +   MQ    V PD  + V ++   +
Sbjct: 572 ITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQ-QAGVWPDKTSFVAVVKAYS 630

Query: 290 D-SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +  +   E   +        +   + + N+L+  Y +  S  KA  LF+++A   D V+W
Sbjct: 631 NVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAE-RDAVTW 689

Query: 349 NSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N+M+S             LF++ML   +     T+L +L  C S  +L+ GK+I  W   
Sbjct: 690 NTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICVWLDH 749

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
              S N +  NA+++MY  CG    A   FS++Q      D   WN +I A       + 
Sbjct: 750 TPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQ----GRDAVSWNALIGAYGSYSRGRY 805

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNAL 512
           A + F++M Q + ++PD+VT   ++S C +  L  E  K    +     +  +T     +
Sbjct: 806 AFQIFQAM-QLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCI 864

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA---FSQNKAEVRALELFRHLEFEPN 568
           + + GR   +  A  V E      +   W  ++SA     + +   RA E  R +E +P 
Sbjct: 865 VDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAE--RLVELDPE 922

Query: 569 EISIVSILS 577
             S   +LS
Sbjct: 923 VTSAYVVLS 931



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 244/523 (46%), Gaps = 47/523 (8%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
           V L+  C+ S  L  GR +H    R     D ++ N L+  Y K  SL  A  +F  +  
Sbjct: 9   VDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLE 68

Query: 342 MN--DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
            +  +LV+W ++I+             LF++M    +     TL+ I  +C +PE+LE G
Sbjct: 69  TSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDG 128

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K IH +   L  +++ +  ++L+ MY  CG L  A  + Q +    +T  WN ++ A  Q
Sbjct: 129 KKIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSM-EEWNTVAWNSLMGAFIQ 184

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +   +EA++ +  M  Q    P   T + V++A  +LE    GK +H    ++    D  
Sbjct: 185 HDRVEEAMELYWEML-QCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVV 243

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           VQ AL+ MYG+C  +  A  VF+     ++  W+ +ISA         +L LFR ++ E 
Sbjct: 244 VQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEG 303

Query: 567 --PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAW 623
             PN +++VS+LSAC     L  GK IH  V   G++ +  + +A++ MY  C S   AW
Sbjct: 304 NRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAW 363

Query: 624 --------------SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                         + M+ A    G    A++LF  M + GI     + +S L ACS + 
Sbjct: 364 DVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTS 423

Query: 670 LVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
            +  G  ++  MLE   E D+         +V+M G+ GK++ A    + LP Q     W
Sbjct: 424 GLSHGEFFHARMLECGLELDIFVAN----ALVNMYGKCGKVEAAEHVFEELPEQ-DVRTW 478

Query: 727 GAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISLSNMY 767
            AM+ A   + + + G  V   + +   +P+ V + I+L+  Y
Sbjct: 479 NAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACY 521


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 227/745 (30%), Positives = 394/745 (52%), Gaps = 49/745 (6%)

Query: 76   LLIIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
            L +++ A  +   ++ GR +H L S    +  D  LC   + MYA CG  + S   F  +
Sbjct: 442  LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501

Query: 135  HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ-ADNVSLSSAVAASACLGELSYG 193
               +   WN ++S    N   ++ L  F EM  + +   D+ +    + A A + ++  G
Sbjct: 502  RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 561

Query: 194  KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
              +H L +K G  +  +V   N+L+S Y   G +  A + F  M  +++VSWN++I  F+
Sbjct: 562  LAVHGLVVKTGLVEDVFVG--NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 619

Query: 254  LNGKFEEAFDLLHEMQLMR---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             NG  EE+F LL EM       +  PD+AT+VT++ +CA    +  G+ VHG+A++  L 
Sbjct: 620  DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 679

Query: 311  YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             +L++ N+LMD YSK   ++ A+++F      N +VSWN+M+ G            + ++
Sbjct: 680  KELVLNNALMDMYSKCGCITNAQMIFKMNNNKN-VVSWNTMVGGFSAEGDTHGTFDVLRQ 738

Query: 359  MLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            ML           T+L  +P C     L   K +HC+ LK  F  N +  NA +  Y  C
Sbjct: 739  MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 798

Query: 417  GDLVAAFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            G L    S  QR+ H   +   + WN +I    Q+   + ++     M +     PDS T
Sbjct: 799  GSL----SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSFT 853

Query: 474  LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + +++SAC  L+    GK +HG  +++ +  D  V  +++++Y  C ++ +   +F++  
Sbjct: 854  VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 913

Query: 534  NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVLRHGKQ 590
            + +L +WN +I+ + QN    RAL +FR +     +   IS++ +  AC+ L  LR G++
Sbjct: 914  DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 973

Query: 591  IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
             H +      ++++FI+ +L+DMY+                 KS A+W++MI  YG HG 
Sbjct: 974  AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGL 1033

Query: 636  GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
              EAI+LF EM  +G  P   + + +L+AC+HSGL+ EGL+Y + M   + ++P  +H+ 
Sbjct: 1034 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 1093

Query: 696  CIVDMLGRSGKLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C++DMLGR+G+L +A   + + +  +   G+W ++LS+C  H + +MG++VA  LF+LEP
Sbjct: 1094 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 1153

Query: 755  ENVGYYISLSNMYVALGRWKDAVEI 779
            E    Y+ LSN+Y  LG+W+D  ++
Sbjct: 1154 EKPENYVLLSNLYAGLGKWEDVRKV 1178



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 185/729 (25%), Positives = 327/729 (44%), Gaps = 47/729 (6%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GI 69
            T ++T Y+     + S  +F    +K++  WNA+I++   N      L  F EM+    +
Sbjct: 479  TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 538

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
              D  T   ++ A   M+ +  G  VH L +K G++ D  + N  V+ Y   G +  +  
Sbjct: 539  LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM----GWSGEQADNVSLSSAVAASA 185
             F  M   + VSWN+++     N + E+  L   EM    G      D  +L + +   A
Sbjct: 599  LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 658

Query: 186  CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               E+  GK +H   +KL  +    + + N+L+ MYS+CG I  A+  F     K+VVSW
Sbjct: 659  REREIGLGKGVHGWAVKLRLDKE--LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 716

Query: 246  NAIIDGFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            N ++ GF+  G     FD+L +M      V+ D  T++  + +C     L   + +H Y+
Sbjct: 717  NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 776

Query: 305  IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
            +++   Y+ L+ N+ +  Y+K  SLS A+ +F+ I     + SWN++I G  +      S
Sbjct: 777  LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT-VNSWNALIGGHAQSNDPRLS 835

Query: 365  -----QFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                 Q   S LL       ++L +C+  +SL  GK +H + ++     +     +++ +
Sbjct: 836  LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 895

Query: 413  YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
            YI+CG+L    +L   +   S  S WN VI    QNG    A+  F+ M          +
Sbjct: 896  YIHCGELCTVQALFDAMEDKSLVS-WNTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGI 953

Query: 473  TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            +++ V  AC  L     G+  H  ALK L+  D  +  +LI MY +   I  +S VF   
Sbjct: 954  SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 1013

Query: 533  YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
               +  +WN MI  +  +     A++LF  ++     P++++ + +L+AC   G+     
Sbjct: 1014 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL----- 1068

Query: 590  QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI-ELFHEMCN 648
             IH  + +L   ++SF       +  N K  A    M+   G   K    + E   E  +
Sbjct: 1069 -IHEGLRYLDQMKSSF------GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 1121

Query: 649  SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
             GI        SLLS+C     ++ G +    + E    +P  E++V + ++    GK +
Sbjct: 1122 VGIWK------SLLSSCRIHQNLEMGEKVAAKLFELEPEKP--ENYVLLSNLYAGLGKWE 1173

Query: 709  EAYEFIKNL 717
            +  +  + +
Sbjct: 1174 DVRKVRQRM 1182



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 166/605 (27%), Positives = 287/605 (47%), Gaps = 42/605 (6%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            G +  +    +L++ Y    +   +L LF     +++V+WN+MI    +N          
Sbjct: 572  GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 631

Query: 62   GEMVEE----GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            GEM+EE        D  TL+ ++    +   +  G+ VH  ++K  +  +  L N  ++M
Sbjct: 632  GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 691

Query: 118  YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNV 175
            Y+KCG + +++  F   +  + VSWNT++ G              R+M   GE  +AD V
Sbjct: 692  YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 751

Query: 176  SLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
            ++ +AV    C  E  L   K +H   +K  +  +  V+  N+ ++ Y++CG +  A+R 
Sbjct: 752  TILNAVP--VCFHESFLPSLKELHCYSLKQEFVYNELVA--NAFVASYAKCGSLSYAQRV 807

Query: 234  FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
            F G+  K V SWNA+I G A +     + D   +M++   + PD  TV +L+S C+    
Sbjct: 808  FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKS 866

Query: 294  LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            LR G+ VHG+ IR  L  DL +  S++  Y     L   + LF+A+     LVSWN++I+
Sbjct: 867  LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVIT 925

Query: 354  ------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        G+F++M+    Q    +++ +  +C+   SL  G+  H + LK    +
Sbjct: 926  GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED 985

Query: 402  NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            +     +L+ MY   G +  +  +   +   S T+ WN +I+    +G  +EAIK F+ M
Sbjct: 986  DAFIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 1044

Query: 462  TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGR 518
             Q+   +PD +T + V++AC +  L  EG  L  L  +KS  GL   +++   +I M GR
Sbjct: 1045 -QRTGHNPDDLTFLGVLTACNHSGLIHEG--LRYLDQMKSSFGLKPNLKHYACVIDMLGR 1101

Query: 519  CRDIKSASTVF--ESCYNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISI 572
               +  A  V   E     ++  W  ++S+    QN    E  A +LF   E EP +   
Sbjct: 1102 AGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF---ELEPEKPEN 1158

Query: 573  VSILS 577
              +LS
Sbjct: 1159 YVLLS 1163



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 224/493 (45%), Gaps = 21/493 (4%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE--E 67
            + +L+  YS      ++  +F    NK+VV+WN M+                 +M+   E
Sbjct: 685  NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744

Query: 68   GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
             ++ D  T+L  V      + L   + +HC S+K   + +  + N FV  YAKCG L+ +
Sbjct: 745  DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 804

Query: 128  ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            +  F G+      SWN ++ G   +N P   L    +M  SG   D+ ++ S ++A + L
Sbjct: 805  QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864

Query: 188  GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
              L  GK +H   I+   E   +V +  S++S+Y  CG++   +  F  M  K +VSWN 
Sbjct: 865  KSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922

Query: 248  IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
            +I G+  NG  + A  +  +M ++  ++    +++ +   C+    LR GR  H YA++ 
Sbjct: 923  VITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH 981

Query: 308  LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            LL  D  +  SL+D Y+K+ S++++  +FN +       SWN+MI G            L
Sbjct: 982  LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKL 1040

Query: 356  FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F+EM          T L +L +CN    +  G + +   +   G   N      ++ M  
Sbjct: 1041 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLG 1100

Query: 415  NCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-V 472
              G L  A  ++ + +S  +D   W  ++ +C  + + +   K    + + +   P++ V
Sbjct: 1101 RAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYV 1160

Query: 473  TLVNVISACGNLE 485
             L N+ +  G  E
Sbjct: 1161 LLSNLYAGLGKWE 1173


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 216/658 (32%), Positives = 355/658 (53%), Gaps = 40/658 (6%)

Query: 154 YPEKCLLYFREMGW-SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
           Y E+ L+ F ++   SGE  +   L+S + A   LG +  G  +H   ++ G++   YV 
Sbjct: 16  YSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 75

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              SLI  YS+ GBIE A   F  +  K  V+W  II G+   G+   + +L  +M+   
Sbjct: 76  --TSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMR-ET 132

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           +V PD   V +++S C+    L  G+ +H Y +RR    D+ ++N L+DFY+K N +   
Sbjct: 133 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 192

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             LF+ +   N ++SW +MISG            LF EM  L  +       ++L SC S
Sbjct: 193 RKLFDQMVVKN-IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGS 251

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E+LE G+ +H + +K    +N    N L+ MY     L  A  +   ++  +  S +N 
Sbjct: 252 LEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS-YNA 310

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALK 499
           +I   +      EA++ F  M + +   P  +T V+++    +L  A E  K +HGL +K
Sbjct: 311 MIEGYSSQEKLSEALELFHEM-RVRLFPPSLLTFVSLLGVSASL-FALELSKQIHGLIIK 368

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             + LD    +ALI +Y +C  +K A  VFE     ++  WN M   ++Q+     AL+L
Sbjct: 369 XGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKL 428

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +  L+F   +PNE +  ++++A + L  LRHG+Q H  +  +G     F+++AL+DMY+ 
Sbjct: 429 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 488

Query: 617 CKS--------NAA-------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C S        N++       W+SMIS +  HG+  EA+ +F EM   GI+P   + +++
Sbjct: 489 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH+G V++GL ++N+M   + ++P TEH+ C+V +LGRSGKL EA EFI+ +PI+P
Sbjct: 549 LSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEP 607

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              VW ++LSAC   G+ ++GK  AE+    +P++ G YI LSN++ + G W D  ++
Sbjct: 608 AAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKV 665



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 176/613 (28%), Positives = 288/613 (46%), Gaps = 44/613 (7%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++ A TQ+  +++G  +H   +++G   D  +    ++ Y+K GB+  +   F  +    
Sbjct: 43  VIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKT 102

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            V+W TI++G          L  F +M  +    D   +SS ++A + L  L  GK IHA
Sbjct: 103 AVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHA 162

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             ++ G E    VSV N LI  Y++C  ++A  + F  M  K+++SW  +I G+  N   
Sbjct: 163 YVLRRGTEMD--VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFD 220

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            EA  L  EM  +   +PD     ++++ C     L +GR VH Y I+  L  +  + N 
Sbjct: 221 WEAMKLFGEMNRL-GWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNG 279

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+D Y+KSN L  A+ +F+ +A  N ++S+N+MI G            LF EM       
Sbjct: 280 LIDMYAKSNLLXDAKKVFDVMAEQN-VISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 338

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  T +++L    S  +LE  K IH   +K G S +    +AL+ +Y  C  +  A  + 
Sbjct: 339 SLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVF 398

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           + ++   D   WN +    TQ+   +EA+K + ++ Q     P+  T   +I+A  NL  
Sbjct: 399 EEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTL-QFSRQKPNEFTFAALITAASNLAS 456

Query: 487 AFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
              G+  H   +K  MGLD    V NAL+ MY +C  I+ A  +F S    ++  WN MI
Sbjct: 457 LRHGQQFHNQLVK--MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMI 514

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S  +Q+     AL +FR +  E   PN ++ V++LSAC+  G +  G      +   G +
Sbjct: 515 STHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK 574

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
             +                  ++ ++S  G  GK +EA E   +M    I P      SL
Sbjct: 575 PGT----------------EHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAIVWRSL 615

Query: 662 LSACSHSGLVDEG 674
           LSAC  +G V+ G
Sbjct: 616 LSACRIAGNVELG 628



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 163/604 (26%), Positives = 273/604 (45%), Gaps = 57/604 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   TSL+  YS     E +  +F +   K  VTW  +I    +     + L  F
Sbjct: 67  GFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELF 126

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   +  ++SA + +  L+ G+ +H   ++ G   D S+ NV ++ Y KC
Sbjct: 127 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 186

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +    F  M   + +SW T++SG + N++  + +  F EM   G + D  + +S +
Sbjct: 187 NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVL 246

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  G+ +HA  IK   E + +V   N LI MY++   +  A++ F  M  ++
Sbjct: 247 TSCGSLEALEQGRQVHAYTIKANLESNEFVK--NGLIDMYAKSNLLXDAKKVFDVMAEQN 304

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+S+NA+I+G++   K  EA +L HEM++ R   P + T V+L+ + A    L   + +H
Sbjct: 305 VISYNAMIEGYSSQEKLSEALELFHEMRV-RLFPPSLLTFVSLLGVSASLFALELSKQIH 363

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
           G  I+  +  DL   ++L+D YSK + +  A  +F  +    D+V WN+M  G  +    
Sbjct: 364 GLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQHLEN 422

Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L L S   FS       T  A++ + ++  SL  G+  H   +K+G        NAL
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +    S   D  CWN +I    Q+G  +EA+  F+ M  ++   P
Sbjct: 483 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREM-MKEGIQP 540

Query: 470 DSVTLVNVISACGNLELAFEG----KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           + VT V V+SAC +     +G     S+ G  +K   G +                    
Sbjct: 541 NYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKP--GTE-------------------- 578

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
                         + C++S   ++     A E    +  EP  I   S+LSAC   G +
Sbjct: 579 -------------HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNV 625

Query: 586 RHGK 589
             GK
Sbjct: 626 ELGK 629



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 255/542 (47%), Gaps = 39/542 (7%)

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  EEA  +  ++Q      P+   + ++I  C    ++ +G  +HG+ +R     D+ +
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFST 370
             SL+DFYSK+  +  A L+F+ +      V+W ++I+G  K       L L +Q   + 
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLE-KTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133

Query: 371 LL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           ++       ++L +C+  E LE GK IH + L+ G   +   VN L+  Y  C  + A  
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L  ++   +  S W  +I    QN    EA+K F  M  +    PD     +V+++CG+
Sbjct: 194 KLFDQMVVKNIIS-WTTMISGYMQNSFDWEAMKLFGEMN-RLGWKPDGFACTSVLTSCGS 251

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           LE   +G+ +H   +K+ +  +  V+N LI MY +   +  A  VF+     N+ ++N M
Sbjct: 252 LEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAM 311

Query: 544 ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I  +S  +    ALELF  +    F P+ ++ VS+L     L  L   KQIHG +   G 
Sbjct: 312 IEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGV 371

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
             + F  SAL+D+YS C               K    W++M   Y  H +  EA++L+  
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYST 431

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRS 704
           +  S  +P + +  +L++A S+   +  G Q++N +++   D  P   +   +VDM  + 
Sbjct: 432 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKC 489

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYIS 762
           G ++EA +   N  I      W +M+S  + HG+ +    +   + K  ++P  V +   
Sbjct: 490 GSIEEARKMF-NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 763 LS 764
           LS
Sbjct: 549 LS 550


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 222/742 (29%), Positives = 385/742 (51%), Gaps = 58/742 (7%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            L +++ A  +   ++ GR +H L S    + +D  LC   + MYA CG  + S   F  
Sbjct: 86  ALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDA 145

Query: 134 MHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           +   +   WN ++S    N  Y E   ++ + +  +    DN +    + A A + ++  
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGI 205

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +H L +K G  +  +V   N+L+S Y   G +  A + F  M  +++VSWN++I  F
Sbjct: 206 GLAVHGLVVKTGLVEDLFVG--NALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVF 263

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           + NG  + AF             PD+ATVVT++ +CA    +  G+ VHG+A++  L  +
Sbjct: 264 SDNGD-DGAF------------MPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKE 310

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L++ N+LMD YSK   +  ++++F  +    ++VSWN+M+ G            L ++ML
Sbjct: 311 LVVNNALMDMYSKWGCIIDSQMIFK-LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQML 369

Query: 361 YLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
                      T+L  +P C     L   K +HC+ LK  F  + +  NA +  Y  CG 
Sbjct: 370 AGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGS 429

Query: 419 LVAAFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           L    S  QR+ H   +   + WN +I    Q+   + ++     M +     PD+ T+ 
Sbjct: 430 L----SYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQM-KNSGLLPDNFTVC 484

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +++SAC  L+    GK +HG  +++ +  D  V  +++++Y  C ++ +   +F++  + 
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN +I+   QN    RAL LFR +     +P  IS++++  AC+ L  LR G++ H
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
            +      ++N+FI+ +++DMY+                 KS A+W++MI  YG HG+  
Sbjct: 605 AYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAK 664

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EAI+LF EM  +G  P   + + +L+AC+HSGL+ EGL+Y + M   + ++P  +H+ C+
Sbjct: 665 EAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV 724

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           +DMLGR+G+L  A      +  +P  G+W ++LS C  H + +MG++VA  LF LEPE  
Sbjct: 725 IDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKP 784

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
             Y+ LSN+Y  LG+W D  ++
Sbjct: 785 ENYVLLSNLYAGLGKWDDVRQV 806



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 174/686 (25%), Positives = 314/686 (45%), Gaps = 52/686 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  L    +L++ Y    +   +L LF     +++V+WN+MI    +N          
Sbjct: 217 GLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN---------- 266

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G+  +     D  T++ ++    +   +  G+ VH  ++K  +  +  + N  ++MY+K 
Sbjct: 267 GD--DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKW 324

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVSLSS 179
           G +  S+  F   +  + VSWNT++ G              R+M  G    +AD V++ +
Sbjct: 325 GCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILN 384

Query: 180 AVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           AV    C  E  L   K +H   +K  +     ++  N+ ++ Y++CG +  A+R F G+
Sbjct: 385 AVP--VCFDESVLPSLKELHCYSLKQEFVYDELLA--NAFVASYAKCGSLSYAQRVFHGI 440

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K + SWNA+I G+A +     + D   +M+    + PD  TV +L+S C+    LR G
Sbjct: 441 RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMK-NSGLLPDNFTVCSLLSACSKLKSLRLG 499

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           + VHG+ IR  L  DL +  S++  Y     L   ++LF+A+   N LVSWN++I+    
Sbjct: 500 KEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMED-NSLVSWNTVITGHLQ 558

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GLF++M+    Q    +++ +  +C+   SL  G+  H + LK    +N   
Sbjct: 559 NGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFI 618

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             +++ MY   G +  +  +   +   S  S WN +I+    +G  +EAIK F+ M Q+ 
Sbjct: 619 ACSIIDMYAKNGAITQSSKVFNGLKEKSAAS-WNAMIMGYGMHGRAKEAIKLFEEM-QRT 676

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDI 522
             +PD +T + V++AC +  L  EG  L  L  +KS  GL   +++   +I M GR   +
Sbjct: 677 GRNPDDLTFLGVLTACNHSGLLHEG--LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL 734

Query: 523 KSASTV-FESCYNCNLCTWNCMIS--AFSQN--KAEVRALELFRHLEFEPNEISIVSILS 577
            +A  V  E     ++  WN ++S     QN    E  A +LF     +P    ++S L 
Sbjct: 735 DNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLY 794

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGW 637
           A   LG     +Q+   +  +  ++++    + +++     S       +  +      W
Sbjct: 795 A--GLGKWDDVRQVRQRMKEMSLRKDA--GCSWIELNGKVFSFVVGERFLDGFEEIKSLW 850

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLS 663
             +E+  ++   G RP  SSV   LS
Sbjct: 851 SILEM--KIWKMGYRPDTSSVQHDLS 874


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 220/717 (30%), Positives = 363/717 (50%), Gaps = 36/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  +I  G+     + N+ +++YAK G +  +   F  +   D VSW  ++SG   N  
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ +  +REM  SG       LSS ++A         G++IH    K G+    +V   
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG-- 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LIS+Y +C     A+R F  M   D V++N +I G A  G  + A  +  EMQL   +
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL-SGL 240

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  T+ +L++ C+    LR+G+ +H Y ++  +  D +M  SL+D Y KS  + +A  
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQ 300

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F++     ++V WN M+              +F  ML    + +  T   +L +C    
Sbjct: 301 IFDS-GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +  G+ IH   +K GF ++      L+ MY   G L  A  +L  I    D   W  +I
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEK-DVVSWTSMI 418

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q+   +EA++TFK M Q     PD++ L + ISAC  ++   +G  +H     S  
Sbjct: 419 AGYVQHEFCKEALETFKEM-QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  + N L+ +Y RC   K A + FE+  +    TWN +IS F+Q+     AL++F  
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMK 537

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           ++    + N  + VS +SA   L  ++ GKQIH  V   G+   + IS+AL+ +Y  C  
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGS 597

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        ++  +W+++I+    HG+G EA++LF +M   G++P+  + + +L+A
Sbjct: 598 IEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTA 657

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH GLV+EGL Y+ +M  E+ + P  +H+ C+VD+LGR+G+L  A  F++ +PI     
Sbjct: 658 CSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSM 717

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y   G+W    +I K
Sbjct: 718 VWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRK 774



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 168/592 (28%), Positives = 295/592 (49%), Gaps = 23/592 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+   +   +  +F E   +D V+W A+++   +N      +  + EM   G+   
Sbjct: 83  LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L  I+SA T+    + GR++H    K G  +++ + N  +++Y +C     ++  F 
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   D+V++NT++SG     + ++ L  F EM  SG   D+V+++S +AA + +G+L  
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H+  +K G     Y+ +  SL+ +Y + GDIE A + F      +VV WN ++  +
Sbjct: 263 GKQLHSYLLKAGMS-LDYI-MEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAY 320

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
                  ++FD+ + M L   V P+  T   ++  C  +  +  G  +H   I+     D
Sbjct: 321 GQIDDLAKSFDIFYRM-LAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSD 379

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           + +   L+D YSK   L KA+ + + I    D+VSW SMI+G             FKEM 
Sbjct: 380 MYVSGVLIDMYSKYGWLDKAQRILDMIEE-KDVVSWTSMIAGYVQHEFCKEALETFKEM- 437

Query: 361 YLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
             C  +  +  LA  + +C   +++  G  IH      G+S +    N L+++Y  CG  
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGIS 497

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             AFS  + I H    + WN +I    Q+G ++EA+K F  M  Q  A  +  T V+ IS
Sbjct: 498 KEAFSSFEAIEHKEGIT-WNGLISGFAQSGLYEEALKVFMKM-DQAGAKYNVFTFVSSIS 555

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A  NL    +GK +H   +K+    +T + NALI++YG+C  I+ A   F      N  +
Sbjct: 556 ASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS 615

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           WN +I+  SQ+   + AL+LF  ++    +P++++ V +L+AC+ +G++  G
Sbjct: 616 WNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 274/593 (46%), Gaps = 23/593 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +      +L++ Y     F  +  +F +    D VT+N +I+   +       L  
Sbjct: 172 QGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGI 231

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM   G+  DS T+  +++A + +  L++G+ +H   +KAGM  D  +    +++Y K
Sbjct: 232 FDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVK 291

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD+  +   F      + V WN ++      +   K    F  M  +G + +  +    
Sbjct: 292 SGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCM 351

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +      GE+  G+ IH+L IK G++   YVS    LI MYS+ G ++ A+R    +  K
Sbjct: 352 LRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS--GVLIDMYSKYGWLDKAQRILDMIEEK 409

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW ++I G+  +   +EA +   EMQ    + PD   + + IS CA    + +G  +
Sbjct: 410 DVVSWTSMIAGYVQHEFCKEALETFKEMQAC-GIWPDNIGLASAISACAGIKAVHQGSQI 468

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H          D+ + N L+  Y++     +A   F AI    + ++WN +ISG      
Sbjct: 469 HARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAI-EHKEGITWNGLISGFAQSGL 527

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F +M    ++++  T ++ + +  +   ++ GK IH   +K G+++ T   NA
Sbjct: 528 YEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNA 587

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  CG +  A      ++  ++ S WN +I  C+Q+G   EA+  F  M +QQ   
Sbjct: 588 LISLYGKCGSIEDAKMDFFEMTKRNEVS-WNTIITCCSQHGRGLEALDLFDQM-KQQGLK 645

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P  VT V V++AC ++ L  EG      ++ +  G+  R  +   ++ + GR   +  A 
Sbjct: 646 PSDVTFVGVLTACSHVGLVEEGLCYFK-SMSNEHGIHPRPDHYACVVDILGRAGQLDRAK 704

Query: 527 T-VFESCYNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
             V E     +   W  ++SA   +K  E+        LE EP++ +   +LS
Sbjct: 705 RFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLS 757


>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
 gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
          Length = 845

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 226/768 (29%), Positives = 387/768 (50%), Gaps = 49/768 (6%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +  ++ +V W +M+TA V++  V     FF  M  EG+  D  T + I++A      
Sbjct: 85  VFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNAC---ES 141

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QG +VH L +   + +D  + N  + M AKC DL+ +   F  M   D +SW  +++ 
Sbjct: 142 LAQGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTA 201

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGELSYGKVIHALGIKLGYE 206
              N +  +   Y+  M   G   +N++  + +AA  SA   +L YG V+ A       E
Sbjct: 202 YARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADLVYGNVVEA-------E 254

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
                 V N+ I+M+S+CG ++ A   F  M   DV SWNA++   A +G   EA +L  
Sbjct: 255 WETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFR 314

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            M     V  D  T+V  +S CA    L +G+S+H    R  L  D++   +L+  YS+ 
Sbjct: 315 RMP--SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRC 372

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCSQFSFSTLLA 373
             L +A  +F+ I   N +VSWN+MI+              +F+ ML    + + +T L 
Sbjct: 373 GDLGEARRVFDGILGKN-VVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALN 431

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           ++ +    E    GK +H W +  G  +++   +AL++MY   G L  A  + ++I    
Sbjct: 432 VVSAV---ECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIER- 487

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN ++  C  +G  +EA++ F  M  +  AS +  T +  +SA     +++ G+ L
Sbjct: 488 DVFAWNAIVGVCVGHGQPREALEWFSRMLLE-GASGNRATFLLALSAVSPDRVSY-GRKL 545

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HGL  +S +  D  V NALI+MY RC+ ++ A   F+   + ++ +W  +I+A     + 
Sbjct: 546 HGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSC 605

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
             A++LF+ +E EP+ ++  ++L ACT +   R GK +H     LG + N F+++AL+ M
Sbjct: 606 QEAIDLFQRMELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHM 665

Query: 614 YSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           +S                  + A W++M+  Y   G     I+ FH M   G+ P   + 
Sbjct: 666 HSKFGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITF 725

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           ++++SACSH+GLV++G + + +M  +Y V    E + C++D+L R+G+L+EAY+F++ +P
Sbjct: 726 LAVVSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMP 785

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
             P    W  +L+AC   GD + G   A  + + EP     ++ LS M
Sbjct: 786 CGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELSYM 833



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 275/585 (47%), Gaps = 35/585 (5%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            + +   F     +DV++W  M+TA   N  +     ++  M+ EG+  ++ T L +++A
Sbjct: 177 LDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAA 236

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            +     +   +V+   ++A    D+ + N  +NM++KCG L+ +   F  M   D  SW
Sbjct: 237 CSSA---RDADLVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSW 293

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N +++    + +  + L  FR M  S    D  +L  A++  A    L  GK IH+   +
Sbjct: 294 NAMVAALAQHGFSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVAR 352

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LG E    V    +L++MYS+CGD+  A R F G+  K+VVSWN +I  +  +       
Sbjct: 353 LGLETD--VVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRA 410

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
             +  + L+  V P   T + ++S      +   G+ +HG+ +   L  D  + ++L++ 
Sbjct: 411 LEIFRLMLLDGVRPTRTTALNVVSAVECQSV---GKQLHGWIVDTGLYSDSFIGSALVNM 467

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFST 370
           Y ++ SL  A  +F  I    D+ +WN+++               F  ML   +  + +T
Sbjct: 468 YERTGSLGDARRVFEKIIE-RDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRAT 526

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
            L  L S  SP+ + +G+ +H    + G   +    NAL+ MY  C  L  A +   R+ 
Sbjct: 527 FLLAL-SAVSPDRVSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLE 585

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             S  S W  VI AC   G  QEAI  F+ M  +    PD VT   V+ AC  +    EG
Sbjct: 586 DKSIVS-WTSVIAACVDLGSCQEAIDLFQRMELE----PDRVTFTTVLEACTIVSAHREG 640

Query: 491 KSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           K +H  A +  +GL++   V  ALI M+ +  ++  A  +FE+     L  WN M+  ++
Sbjct: 641 KLVHSRARE--LGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLACWNAMLGGYA 698

Query: 549 QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
           Q       ++ F  ++     P+ I+ ++++SAC+  G++  G +
Sbjct: 699 QTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGAR 743



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 184/719 (25%), Positives = 326/719 (45%), Gaps = 51/719 (7%)

Query: 52  RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC 111
           RC  + L       +  +  D +  L +V+   +   L +   V+      G++ D    
Sbjct: 7   RCFTLQLWQRAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFG 66

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
              V M+ KC  ++ +   F  M     V W ++++  + +   ++  L+F  M   G  
Sbjct: 67  ASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVL 126

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D V+  S + A   L +   G+++H L +    E    V + N+L+ M ++C D++ A 
Sbjct: 127 PDRVTFISILNACESLAQ---GELVHRLIVDKNLESD--VVIGNALMKMLAKCYDLDGAA 181

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M  +DV+SW  ++  +A NG   EAF     M L+  V P+  T + +++ C+ +
Sbjct: 182 RFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRM-LLEGVVPNNITFLAVLAACSSA 240

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              R+   V+G  +      D ++ N+ ++ +SK   L +A  +F+ +    D+ SWN+M
Sbjct: 241 ---RDADLVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRW-DVKSWNAM 296

Query: 352 ISGLFK-----EMLYLCSQF------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           ++ L +     E L L  +         +TL+  L +C +PESLE GKSIH    +LG  
Sbjct: 297 VAALAQHGFSSEALELFRRMPSEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLE 356

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFK 459
            + +   AL+ MY  CGDL  A  +   I   +  S WN +I A  ++      A++ F+
Sbjct: 357 TDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVS-WNNMIAAYGRDESLHSRALEIFR 415

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M       P   T +NV+SA   +E    GK LHG  + + +  D+ + +AL+ MY R 
Sbjct: 416 LML-LDGVRPTRTTALNVVSA---VECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERT 471

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSIL 576
             +  A  VFE     ++  WN ++     +     ALE F  +  E    N  + +  L
Sbjct: 472 GSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLAL 531

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           SA +   V  +G+++HG +   G + ++ +++AL+ MY+ C               KS  
Sbjct: 532 SAVSPDRV-SYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIV 590

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W+S+I+A    G   EAI+LF  M    + P + +  ++L AC+      EG +  ++ 
Sbjct: 591 SWTSVIAACVDLGSCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREG-KLVHSR 646

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
             E  +         ++ M  + G L EA    + +   P    W AML   +  G ++
Sbjct: 647 ARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVE-APTLACWNAMLGGYAQTGHSQ 704



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 215/482 (44%), Gaps = 33/482 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV-VMGLHF 60
           G    +   T+L+T YS       +  +F     K+VV+WN MI A   +  +    L  
Sbjct: 354 GLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEI 413

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ +G+R   TT L +VSA+    C   G+ +H   +  G+ +DS + +  VNMY +
Sbjct: 414 FRLMLLDGVRPTRTTALNVVSAV---ECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYER 470

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSL 177
            G L  +   F  +   D  +WN I+  C+ +  P + L +F  M   G SG +A  +  
Sbjct: 471 TGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLA 530

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            SAV+       +SYG+ +H L  + G E     +V N+LISMY++C  +E A   F  +
Sbjct: 531 LSAVSPD----RVSYGRKLHGLIAESGLEADN--NVANALISMYARCKSLEDARNTFDRL 584

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K +VSW ++I      G  +EA DL   M+L    EPD  T  T++  C      REG
Sbjct: 585 EDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL----EPDRVTFTTVLEACTIVSAHREG 640

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISG-- 354
           + VH  A    L  ++ +  +L+  +SK  +L +A  +F A+ AP   L  WN+M+ G  
Sbjct: 641 KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPT--LACWNAMLGGYA 698

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
                      F  M          T LA++ +C+    +E G ++        G  +  
Sbjct: 699 QTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGARTFASMGPDYGVGHGL 758

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                L+ +    G L  A+  LQ +        W  ++ AC   G  +      +S+ +
Sbjct: 759 EDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIE 818

Query: 464 QQ 465
           ++
Sbjct: 819 RE 820



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 151/332 (45%), Gaps = 36/332 (10%)

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           ++ T Q + S D    + +++ C   +L  E  S++       + LD     +++ M+ +
Sbjct: 16  RAFTSQPSVSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIK 75

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSI 575
           CR I  AS VFE   + ++  W  M++AF  ++   RA   F  ++ E   P+ ++ +SI
Sbjct: 76  CRSIHDASRVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISI 135

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           L+AC  L     G+ +H  +     + +  I +AL+ M + C               +  
Sbjct: 136 LNACESLA---QGELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDV 192

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +W+ M++AY  +G   EA   +  M   G+ P   + +++L+ACS +   D  L Y N 
Sbjct: 193 ISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSAR--DADLVYGNV 250

Query: 681 MLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           +  E+    ET+  V    ++M  + G L  A++    +  +     W AM++A + HG 
Sbjct: 251 VEAEW----ETDTMVANASINMFSKCGCLDRAHDVFHRMK-RWDVKSWNAMVAALAQHGF 305

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           +    +    LF+  P  V   +  + + +AL
Sbjct: 306 SSEALE----LFRRMPSEVA--VDKTTLVIAL 331


>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 242/788 (30%), Positives = 402/788 (51%), Gaps = 82/788 (10%)

Query: 68   GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            G + +   L  ++ +    + ++ G V+H  ++K G ++  SLC   +N+YAK G L+  
Sbjct: 966  GYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 1025

Query: 128  ECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASA 185
               F  M   D V WN ++SG     ++  + +  FR M    E   N V+++  +   A
Sbjct: 1026 NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 1085

Query: 186  CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
             L E   GK +H+  IK G E   +    N+LISMY++CG +   A  AF  +  KDVVS
Sbjct: 1086 RLRE-DAGKSVHSYVIKSGLES--HTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVS 1142

Query: 245  WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLREGRSVH 301
            WNA+I GF+ N   EEAF L H M L   ++P+ AT+ +++ +CA   ++   R G+ VH
Sbjct: 1143 WNAVIAGFSENKFTEEAFKLFHAM-LKGPIQPNYATIASILPVCASLEENAGYRYGKEVH 1201

Query: 302  GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
             + +RR+ L  D+ ++NSLM FY +   + KAE LF  +    DLVSWN++I+G      
Sbjct: 1202 CHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKS-RDLVSWNAIIAGYASNGE 1260

Query: 355  ------LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGV 406
                  LF E + L +    S TL+++LP+C    +L+  K IH + ++  G   +T   
Sbjct: 1261 WLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVG 1320

Query: 407  NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            NAL+  Y  C    AA      IS   D   WN ++ A T++G     +     M  ++ 
Sbjct: 1321 NALLSFYAKCNYTQAALQTFLMISRK-DLISWNAILDAFTESGCETHLVNLLHWML-REG 1378

Query: 467  ASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTR--VQNALITMYGRCRDIK 523
              PDS+T++ +I     +    + K  H  +++  L+  D    + N ++  Y +C ++K
Sbjct: 1379 IRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMK 1438

Query: 524  SASTVFES------CYNCN--------------------------LCTWNCMISAFSQNK 551
             A  +F S         CN                          L TWN M+  +++N 
Sbjct: 1439 YAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAEND 1498

Query: 552  AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               +AL LF  L+    +P+ ++I+SIL AC  +  +   +Q HG+V    F +   ++ 
Sbjct: 1499 FPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVR-LNG 1557

Query: 609  ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            A +DMYS C               K    +++M+  +  HG G EA+ +F  M   G++P
Sbjct: 1558 AFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKP 1617

Query: 654  TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
                + ++L ACSH+GLVDEG + +N++ + +  +P  E + C+VD+L R G++++AY F
Sbjct: 1618 DHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTF 1677

Query: 714  IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
            +  +PI+    +WG +L AC  H + ++G+ VA+ LFK+E +N+G Y+ +SN+Y A  RW
Sbjct: 1678 VTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARW 1737

Query: 774  KDAVEIGK 781
               +EI +
Sbjct: 1738 DGVMEIRR 1745



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 170/648 (26%), Positives = 299/648 (46%), Gaps = 66/648 (10%)

Query: 13   LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV---ENRCVVMGLHFFGEMVEEGI 69
            LL  Y+     +    LF E   +D V WN +++       +   VM L     MV E  
Sbjct: 1012 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA- 1070

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSE 128
            + +S T+ I++    ++     G+ VH   IK+G+ + +   N  ++MYAKCG + + + 
Sbjct: 1071 KPNSVTIAIVLPVCARLR-EDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 1129

Query: 129  CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
              F+ +   D VSWN +++G   N + E+    F  M     Q +  +++S +   A L 
Sbjct: 1130 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 1189

Query: 189  E---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            E     YGK +H   ++   E    VSV NSL+S Y +   +E AE  F  M  +D+VSW
Sbjct: 1190 ENAGYRYGKEVHCHVLRR-MELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSW 1248

Query: 246  NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            NAII G+A NG++ +A +L  E   + +++PD  T+V+++  CA    L+  + +HGY I
Sbjct: 1249 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYII 1308

Query: 306  RRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            R   L  D  + N+L+ FY+K N    A   F  I+   DL+SWN+++            
Sbjct: 1309 RHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMIS-RKDLISWNAILDAFTESGCETHL 1367

Query: 355  --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF----SNNTIGVNA 408
              L   ML    +    T+L I+    +   ++  K  H + ++ G     +  T+G N 
Sbjct: 1368 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLG-NG 1426

Query: 409  LMHMYINCGDLVAAFSLLQRISHN-------------------------------SDTSC 437
            ++  Y  CG++  A ++   +S                                 +D + 
Sbjct: 1427 MLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTT 1486

Query: 438  WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
            WN+++    +N    +A+  F  + Q Q   PD VT+++++ AC ++      +  HG  
Sbjct: 1487 WNLMVRVYAENDFPDQALSLFHEL-QGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYV 1545

Query: 498  LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            +++    D R+  A I MY +C  +  A  +F S    +L  +  M+  F+ +     AL
Sbjct: 1546 IRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEAL 1604

Query: 558  ELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQ 601
             +F +   L  +P+ + I ++L AC+  G++  G +I   +  + GFQ
Sbjct: 1605 RIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQ 1652



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 216/482 (44%), Gaps = 51/482 (10%)

Query: 12   SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIR 70
            SL++ Y  +   E +  LF    ++D+V+WNA+I     N   +  L  F E +  E I+
Sbjct: 1219 SLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 1278

Query: 71   FDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             DS TL+ ++ A   ++ L+  + +H   I+  G+  D+S+ N  ++ YAKC    ++  
Sbjct: 1279 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 1338

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            TF  +   D +SWN I+     +      +     M   G + D++++ + +   A +  
Sbjct: 1339 TFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSR 1398

Query: 190  LSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-------- 240
            +   K  H+  I+ G  +     ++ N ++  Y++CG+++ A   F  ++ K        
Sbjct: 1399 VKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNS 1458

Query: 241  ------------------------DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
                                    D+ +WN ++  +A N   ++A  L HE+Q  + ++P
Sbjct: 1459 MISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ-GQGMKP 1517

Query: 277  DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
            DI T+++++  CA    +   R  HGY IR     D+ +  + +D YSK  S+  A  LF
Sbjct: 1518 DIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLF 1576

Query: 337  NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             + +P  DLV + +M+ G            +F  ML L  +     + A+L +C+    +
Sbjct: 1577 LS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLV 1635

Query: 385  EFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            + G  I     K+ GF         ++ +    G +  A++ + R+   ++ + W  ++ 
Sbjct: 1636 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLG 1695

Query: 444  AC 445
            AC
Sbjct: 1696 AC 1697



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 4/223 (1%)

Query: 9    TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            T  S+++ Y   S  + + A+F      D+ TWN M+    EN      L  F E+  +G
Sbjct: 1455 TCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG 1514

Query: 69   IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            ++ D  T++ I+ A   M  +   R  H   I+A    D  L   F++MY+KCG +  + 
Sbjct: 1515 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA-CFNDVRLNGAFIDMYSKCGSVFGAY 1573

Query: 129  CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
              F      D V +  ++ G   +   E+ L  F  M   G + D+V +++ + A +  G
Sbjct: 1574 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 1633

Query: 189  ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
             +  G K+ +++    G++  P +     ++ + ++ G I+ A
Sbjct: 1634 LVDEGWKIFNSIEKVHGFQ--PTMEQYACVVDLLARGGRIKDA 1674


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 224/789 (28%), Positives = 397/789 (50%), Gaps = 40/789 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      + +   F     K+V TW A+I  C  + C  + +    +M+ EG++ D
Sbjct: 41  LIHTYGKCHSLDDAWETFERMSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPD 100

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TLL  +++      L  G+++H L  ++G   D  L N  V+MY  CG ++ ++  F 
Sbjct: 101 NITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFD 160

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + ++W T M G       E+    FR M   G +++ V+  + V A +    L  
Sbjct: 161 AMPARNVITW-TAMIGAHAETSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEV 219

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G ++H   ++     +    + N+LI+MY +CG +E A   F  M  +D+++WNA+I  +
Sbjct: 220 GIILHMRSVE--SSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEY 277

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G  EEA  LL+++ L    +PD  T V L+++      L + + VH + +   +  +
Sbjct: 278 GQHGHVEEAV-LLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSIN 336

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFS 367
           + +  +L+  YSK  SL     LF  + P  +++SWN M++     GL ++ + +     
Sbjct: 337 IALGTALVAMYSKCESLEDTRWLFEKM-PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQ 395

Query: 368 FS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T + +L  C     L+ G+ +H W  +     + I  N+L++MY  CG++ 
Sbjct: 396 LDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVE 455

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   I   +  S W  ++ A ++      A+  F ++       P  +T +  + A
Sbjct: 456 QAEMVFDGILQRNVIS-WTAMLTAYSRQNRQDMALLLFHAI-HLSGVKPTCITFLEALDA 513

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCT 539
           C   E   +G+ +H  A++S    D  + +AL+ MYGRC  I+ A   F+      N  T
Sbjct: 514 CVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVT 573

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVF 596
           W+ MI+AF Q+  +   L+  R ++ +  ++S     S LSAC+ L  LR GK+IH +V 
Sbjct: 574 WSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVR 633

Query: 597 HLGFQ-ENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAI 640
              F  E + ++++L+ MY  C S                  W+++IS Y  HG+  +A+
Sbjct: 634 ERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAV 693

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           ELFH M   G+ P   + + +LS CSH GL+DEG+  Y +M+E   + P  +++ C++D+
Sbjct: 694 ELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVE-LGLEPTQDNYACVIDL 752

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+GKLQEA EFI++L  +P      ++LS+C  HGD + G++ AE + +++P +   +
Sbjct: 753 LGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAH 812

Query: 761 ISLSNMYVA 769
           + LS++Y A
Sbjct: 813 VVLSSIYSA 821



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 189/700 (27%), Positives = 336/700 (48%), Gaps = 42/700 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ Y +    + +  +F     ++V+TW AMI A  E   +      F  M  EG + 
Sbjct: 141 ALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAET-SLEQAFKVFRLMELEGFKS 199

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T + +V A ++   L+ G ++H  S+++    ++ LCN  + MY +CG L  +   F
Sbjct: 200 NFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIF 259

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           S M   D ++WN +++    + + E+ +L ++ M   G + D V+  + +  S     L+
Sbjct: 260 SSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALT 319

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             K++H+  ++ G   S  +++  +L++MYS+C  +E     F  M  ++V+SWN ++  
Sbjct: 320 DVKLVHSHIVESGV--SINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTA 377

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A +G   +A  +   MQL   V+PD  T V L+++C  S  L+ GR VHG+        
Sbjct: 378 YAKHGLGRKAVQITEYMQL-DGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEA 436

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-----MLYLCSQF 366
           DL++ NSL++ Y +   + +AE++F+ I   N ++SW +M++   ++      L L    
Sbjct: 437 DLILWNSLLNMYGRCGEVEQAEMVFDGILQRN-VISWTAMLTAYSRQNRQDMALLLFHAI 495

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
             S       T L  L +C   E+L  G+ +H   ++ G   +    +AL+ MY  CG +
Sbjct: 496 HLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSI 555

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A +         +   W+ +I A  Q+G  +E ++  + M QQQ       T  + +S
Sbjct: 556 RDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFM-QQQGLDMSPATFASTLS 614

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLD-TRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           AC NL    EGK +H    +     +   V N+L+TMYG+C  +  A  VFE+    ++ 
Sbjct: 615 ACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDII 674

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN +IS ++Q+     A+ELF  ++ E   P+ ++ V ILS C+  G+L  G   +  +
Sbjct: 675 CWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASM 734

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
             LG +                 +   ++ +I   G  GK  EA E    +   G RP  
Sbjct: 735 VELGLE----------------PTQDNYACVIDLLGRAGKLQEAEEFIQSL---GTRPAI 775

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
            ++ SLLS+C   G V  G +    ++ E D R  + H V
Sbjct: 776 ETLTSLLSSCKSHGDVQRGRRAAEGIM-EMDPRSSSAHVV 814



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 187/712 (26%), Positives = 340/712 (47%), Gaps = 46/712 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++ A  ++  L   R +H   ++A +     L N  ++ Y KC  L+ +  TF  M   +
Sbjct: 6   LLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 65

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
             +W  I+  C H++     ++  R+M   G + DN++L +A+ +      L  GK+IH 
Sbjct: 66  VYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHG 125

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
           L  + G++    + + N+L+SMY  CG ++ A+R F  M  ++V++W A+I   A     
Sbjct: 126 LIAQSGHQCD--LILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHA-ETSL 182

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           E+AF +   M+L    + +  T VTL+  C+    L  G  +H  ++      +  + N+
Sbjct: 183 EQAFKVFRLMEL-EGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNA 241

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+  Y +   L  A  +F+++    D+++WN++I+             L++ ML    + 
Sbjct: 242 LITMYGRCGRLEDARAIFSSMVE-RDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 300

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T +A+L   N PE+L   K +H   ++ G S N     AL+ MY  C  L     L 
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 360

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLE 485
           +++   +  S WN+++ A  ++G  ++A++  + M Q     PD+VT V +++ C G+ +
Sbjct: 361 EKMPQRNVIS-WNVMVTAYAKHGLGRKAVQITEYM-QLDGVKPDNVTCVGLLNVCTGSAD 418

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L   G+ +HG   +     D  + N+L+ MYGRC +++ A  VF+     N+ +W  M++
Sbjct: 419 LKL-GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLT 477

Query: 546 AFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A+S+   +  AL LF  +     +P  I+ +  L AC     L  G+ +H      G   
Sbjct: 478 AYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDT 537

Query: 603 NSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           +  + SAL+ MY  C                K++  WS+MI+A+  HG+  E ++    M
Sbjct: 538 DVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFM 597

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSG 705
              G+  + ++  S LSACS+   + EG + ++ + E  +D    T  +  +V M G+ G
Sbjct: 598 QQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTN-SLVTMYGKCG 656

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            L  A E  +    Q     W A++S  + HG T   +   EL  +++ E V
Sbjct: 657 SLDCAREVFETSRRQDII-CWNAIISGYAQHGQT---RDAVELFHRMQQEGV 704



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 256/539 (47%), Gaps = 22/539 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P   +L+T Y      E + A+F     +D++ WNA+IT   ++  V   +  +  M++E
Sbjct: 237 PLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQE 296

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + D  T + +++       L   ++VH   +++G+  + +L    V MY+KC  L  +
Sbjct: 297 GCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDT 356

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   + +SWN +++    +    K +     M   G + DNV+    +      
Sbjct: 357 RWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGS 416

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +L  G+ +H   I  G  ++  + + NSL++MY +CG++E AE  F G+  ++V+SW A
Sbjct: 417 ADLKLGRKVHGW-IAEGRCEADLI-LWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTA 474

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  ++   + + A  L H + L   V+P   T +  +  C  +  L +GR VH  A++ 
Sbjct: 475 MLTAYSRQNRQDMALLLFHAIHL-SGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQS 533

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKE 358
               D+ + ++L+  Y +  S+  A+  F+      + V+W++MI+            + 
Sbjct: 534 GNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQH 593

Query: 359 MLYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYI 414
           + ++  Q    S +T  + L +C++   L  GK IH +  +  F      V N+L+ MY 
Sbjct: 594 LRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYG 653

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  + +  S   D  CWN +I    Q+G  ++A++ F  M QQ+  +PD VT 
Sbjct: 654 KCGSLDCAREVFE-TSRRQDIICWNAIISGYAQHGQTRDAVELFHRM-QQEGVTPDPVTF 711

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
           V ++S C +  L  EG  ++  A    +GL+    N   +I + GR   ++ A    +S
Sbjct: 712 VCILSVCSHGGLLDEG--VYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQS 768



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 220/494 (44%), Gaps = 19/494 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   T+L+  YS     E +  LF +   ++V++WN M+TA  ++      +   
Sbjct: 332 GVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQIT 391

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G++ D+ T + +++  T    LK GR VH    +    AD  L N  +NMY +C
Sbjct: 392 EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRC 451

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +E  F G+   + +SW  +++     N  +  LL F  +  SG +   ++   A+
Sbjct: 452 GEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEAL 511

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
            A      L  G+++H+  ++ G +    VS+ ++L++MY +CG I  A+  F      K
Sbjct: 512 DACVGAEALGKGRLVHSCAVQSGNDTD--VSLGSALVAMYGRCGSIRDAKACFDDTEVRK 569

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + V+W+A+I  F  +G+  E    L  MQ  + ++   AT  + +S C++   LREG+ +
Sbjct: 570 NHVTWSAMIAAFVQHGQDREGLQHLRFMQ-QQGLDMSPATFASTLSACSNLADLREGKRI 628

Query: 301 HGYAI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H Y   RR       + NSL+  Y K  SL  A  +F   +   D++ WN++ISG     
Sbjct: 629 HSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFET-SRRQDIICWNAIISGYAQHG 687

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF  M          T + IL  C+    L+ G   +   ++LG         
Sbjct: 688 QTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYA 747

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQN 466
            ++ +    G L  A   +Q +           ++ +C  +G  Q   +  +  M     
Sbjct: 748 CVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPR 807

Query: 467 ASPDSVTLVNVISA 480
           +S   V L ++ SA
Sbjct: 808 SSSAHVVLSSIYSA 821



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 29/323 (8%)

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVF 529
           V  V ++ AC  L+     + LH   +++   LD RV   N LI  YG+C  +  A   F
Sbjct: 1   VEYVRLLQACPKLKALDIARRLHSQIVRA--SLDNRVFLGNHLIHTYGKCHSLDDAWETF 58

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
           E     N+ TW  +I   + +     A+ L R +  E   P+ I++++ L++C     L 
Sbjct: 59  ERMSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALP 118

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GK IHG +   G Q +  + +AL+ MY +C               ++   W++MI A+ 
Sbjct: 119 AGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHA 178

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
                 +A ++F  M   G +    + ++L+ ACS    ++ G+  +   +E      ET
Sbjct: 179 -ETSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAM-ET 236

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
                ++ M GR G+L++A     ++ ++     W A+++    HG  +    + +L+ +
Sbjct: 237 PLCNALITMYGRCGRLEDARAIFSSM-VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQ 295

Query: 752 --LEPENVGYY--ISLSNMYVAL 770
              +P+ V +   +++SN   AL
Sbjct: 296 EGCKPDKVTFVALLTMSNGPEAL 318


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 228/693 (32%), Positives = 365/693 (52%), Gaps = 42/693 (6%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QA 172
            +  YA+ G   SS+  F      D+  W  ++   +   + E+ +  + EM +  + Q 
Sbjct: 39  LIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQI 98

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            N    S + A +  G+LS G  +H   IK G+E    V    SL+ MY +   ++ A +
Sbjct: 99  SNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET--SLLCMYGEMSCLDDACK 156

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           AF  M  +DVV+W++I+  F  NG+  E  D+  +M +  +VEPD  T++++   C++  
Sbjct: 157 AFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQM-ISEAVEPDSVTMLSVTEACSELG 215

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            LR GRSVHGY +RR +  +  + NSL+  Y K   L  AE LF  + P      W  MI
Sbjct: 216 SLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENV-PCRMTAPWTPMI 274

Query: 353 S-----GLFKEMLYLCS---QFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           S     G F+E L + +   +F       T++ +L +C     ++ G+S+H + ++    
Sbjct: 275 SCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMD 334

Query: 401 N--NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
              + +G  ALM +Y + G+L     + + I   +  S WN +I   T+NG  +EA+  F
Sbjct: 335 PELDFLG-PALMELYADTGNLRDCHKVFETIKEKTILS-WNTLISIFTRNGQPEEALLLF 392

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M Q Q   PDS +L + +SACG +  +  G  +HG  +K+    +  VQNALI MY +
Sbjct: 393 VQM-QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKT-GNFNDFVQNALIDMYAK 450

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSI 575
           C  + SA+ +FE     +L TWN MI  FSQN   V A+ LF  +     + ++++ +S+
Sbjct: 451 CGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSV 510

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           + AC+ LG L  GK +H  +   G +++S++ +AL DMYS C               +S 
Sbjct: 511 IQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSI 570

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +WS MI+ YG HG+    I LF++M  SGI+P   + + +LSACSH+G V+EG  Y+N+
Sbjct: 571 VSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNS 630

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M  E+ V P+ +H  C+VD+L R+G L  AY+ I +LP      +WGA+L+ C  H    
Sbjct: 631 M-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRID 689

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           + K + + L  ++  + GYY  LSN+Y   G W
Sbjct: 690 IIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTW 722



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 177/645 (27%), Positives = 308/645 (47%), Gaps = 25/645 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H P ST L+ +Y+ +  FESS  +F      D   W  +I   V        +  +
Sbjct: 28  GLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLY 87

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EMV ++  +  +     ++ A +    L  G  VH   IK G  +D+ +    + MY +
Sbjct: 88  HEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGE 147

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L+ +   F  M   D V+W++I+   + N    + L  F +M     + D+V++ S 
Sbjct: 148 MSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSV 207

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A + LG L  G+ +H   ++   E +   S+ NSLI MY + GD+ +AER F  + C+
Sbjct: 208 TEACSELGSLRLGRSVHGYVVRREIESN--ASLNNSLIVMYGKLGDLYSAERLFENVPCR 265

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
               W  +I  +  +G F+EA ++  +MQ  + +EP+  T+V ++  CA    ++EGRSV
Sbjct: 266 MTAPWTPMISCYNQSGCFQEALNVFAKMQEFK-MEPNQVTMVGVLCACARLGRVKEGRSV 324

Query: 301 HGYAIRRLLGYDL-LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
           HG+ IRR +  +L  +  +LM+ Y+ + +L     +F  I     ++SWN++IS     G
Sbjct: 325 HGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKE-KTILSWNTLISIFTRNG 383

Query: 355 LFKEMLYLCSQFSFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
             +E L L  Q     L+         L +C +    + G  IH + +K G  N+ +  N
Sbjct: 384 QPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQ-N 442

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CG + +A  + ++I   S  + WN +I   +QNG+  EAI  F  M      
Sbjct: 443 ALIDMYAKCGFVHSANKMFEKIKEKSLVT-WNSMICGFSQNGYSVEAITLFDQM-YMNCV 500

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D +T ++VI AC +L    +GK +H   +   +  D+ +  AL  MY +C +++ A  
Sbjct: 501 KMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHG 560

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           VF+     ++ +W+ MI+ +  +      + LF  +     +PN+I+ + ILSAC+  G 
Sbjct: 561 VFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGA 620

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAWSSMIS 628
           +  GK     +   G +      + ++D+ S     N A+  + S
Sbjct: 621 VEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITS 665



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 275/573 (47%), Gaps = 39/573 (6%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +HA     G    P  S    LI  Y+Q G  E+++R F      D   W  +I  +   
Sbjct: 20  LHAHLFITGLHRHPPAST--KLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWG 77

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G FEEA  L HEM      +       +++  C+    L  G  VHG  I+     D ++
Sbjct: 78  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI----------SGL--FKEMLYLC 363
             SL+  Y + + L  A   F+ + P+ D+V+W+S++           GL  F +M+   
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTM-PIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEA 196

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +    T+L++  +C+   SL  G+S+H + ++    +N    N+L+ MY   GDL +A 
Sbjct: 197 VEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAE 256

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L + +     T+ W  +I    Q+G FQEA+  F  M Q+    P+ VT+V V+ AC  
Sbjct: 257 RLFENVPCRM-TAPWTPMISCYNQSGCFQEALNVFAKM-QEFKMEPNQVTMVGVLCACAR 314

Query: 484 LELAFEGKSLHGLALKSLMGLDTR-VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           L    EG+S+HG  ++  M  +   +  AL+ +Y    +++    VFE+     + +WN 
Sbjct: 315 LGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNT 374

Query: 543 MISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +IS F++N     AL LF  ++ +   P+  S+ S LSAC  +   + G QIHG++   G
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 434

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
              N F+ +AL+DMY+ C               KS   W+SMI  +  +G   EAI LF 
Sbjct: 435 -NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFD 493

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           +M  + ++  K + +S++ ACSH G +++G ++ ++ L  Y +R ++     + DM  + 
Sbjct: 494 QMYMNCVKMDKLTFLSVIQACSHLGYLEKG-KWVHHKLIMYGLRKDSYLDTALTDMYSKC 552

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           G+LQ A+     +  +     W  M++    HG
Sbjct: 553 GELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHG 584


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 224/734 (30%), Positives = 382/734 (52%), Gaps = 48/734 (6%)

Query: 86  MNCLKQGRV------VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           ++CL   R+       H  ++  G + D  L N+ +  Y+K G +  +   F  M   + 
Sbjct: 18  LSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNL 77

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFR--EMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           VSW + +S    +   E  +  F   +    GE  +   L+SA+ A A    +S+G+ +H
Sbjct: 78  VSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVH 137

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            + +++G + + YV    +LI++Y++ G I+AA   F  +  K+ V+W A+I G++  G+
Sbjct: 138 GVAVRIGLDGNVYVG--TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQ 195

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
              A +L  +M L   V PD   + + +S C+    L  GR  HGYA R  +  D  ++N
Sbjct: 196 GGVALELFGKMGL-DGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVIN 254

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--------MLYLCSQFSFS 369
           +L+D Y K + LS A  LF+ +   N LVSW +MI+G  +         M +  SQ  + 
Sbjct: 255 ALIDLYCKCSRLSLARKLFDCMENRN-LVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQ 313

Query: 370 TLL----AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
             +    +IL SC S  ++  G+ +H   +K    ++    N+L+ MY  C  L  A ++
Sbjct: 314 PDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAV 373

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDS-VTLVNVISACGN 483
            + ++ + D   +N +I   ++ G    AI  F  M       SP + V+L+ V S+   
Sbjct: 374 FEALAED-DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSA 432

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           +EL+   K +HGL +KS   LD    ++LI +Y +   ++ A  VF   +N ++  WN M
Sbjct: 433 IELS---KQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAM 489

Query: 544 ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I   +QN+    A++LF  L+     PNE + V++++  + L  + HG+Q H  +   G 
Sbjct: 490 IFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGA 549

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
             +  +S+AL+DMY+ C               K    W+SMIS Y  HG+  EA+ +F  
Sbjct: 550 DSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRM 609

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  +G+ P   + + +LSAC+H+GLVDEGL++++ M  +Y + P TEH+  +V++ GRSG
Sbjct: 610 MGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSG 669

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           KL  A EFI+ +PI+P   VW ++LSAC   G+ ++G+   E+    +P + G  + +SN
Sbjct: 670 KLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSN 729

Query: 766 MYVALGRWKDAVEI 779
           +Y + G W DA ++
Sbjct: 730 IYASRGLWSDAQKL 743



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 194/701 (27%), Positives = 329/701 (46%), Gaps = 50/701 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L  +  LL AYS +     +  LF    +K++V+W + I+   ++ C    +  F
Sbjct: 41  GALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALF 100

Query: 62  GEMVEEGIRFDSTTLLIIVSAL---TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
               +     ++    ++ SAL    Q   +  G+ VH ++++ G+  +  +    +N+Y
Sbjct: 101 AAF-QRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLY 159

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AK G ++++   F  +   + V+W  +++G          L  F +MG  G + D   L+
Sbjct: 160 AKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLA 219

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           SAV+A + LG L  G+  H    ++  E     SV N+LI +Y +C  +  A + F  M 
Sbjct: 220 SAVSACSALGFLEGGRQTHGYAYRIAVETD--ASVINALIDLYCKCSRLSLARKLFDCME 277

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +++VSW  +I G+  N    EA  +  ++      +PD+    ++++ C     + +GR
Sbjct: 278 NRNLVSWTTMIAGYMQNSCDAEAMAMFWQLS-QEGWQPDVFACASILNSCGSLAAIWQGR 336

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH +AI+  L  D  + NSL+D Y+K   L++A  +F A+A  +D +S+N+MI G    
Sbjct: 337 QVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAE-DDAISYNAMIEGYSRL 395

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   +F +M Y   + S  T +++L   +S  ++E  K IH   +K G S +    
Sbjct: 396 GDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAG 455

Query: 407 NALMHMYIN---CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           ++L+ +Y       D  A F+L+    HN D   WN +I    QN   +EA+K F  + Q
Sbjct: 456 SSLIDVYSKFSLVEDAKAVFNLM----HNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL-Q 510

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
               +P+  T V +++    L   F G+  H   +K+    D  V NALI MY +C  IK
Sbjct: 511 VSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIK 570

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
               +FES    ++  WN MIS ++Q+     AL +FR +     EPN ++ V +LSAC 
Sbjct: 571 EGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACA 630

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
             G++  G +      H  F +  +      + Y         +S+++ +G  GK   A 
Sbjct: 631 HAGLVDEGLR------HFDFMKTKYAIEPGTEHY---------ASVVNLFGRSGKLHAAK 675

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           E    M    I P  +   SLLSAC   G V+ G +Y   M
Sbjct: 676 EFIERMP---IEPAAAVWRSLLSACHLFGNVEIG-RYATEM 712



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 159/349 (45%), Gaps = 15/349 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   +SL+  YS  S  E + A+F    N+D+V WNAMI    +N      +  F ++  
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+  +  T + +V+  + +  +  G+  H   IKAG  +D  + N  ++MYAKCG +  
Sbjct: 512 SGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKE 571

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               F      D + WN+++S    +   E+ L  FR MG +G + + V+    ++A A 
Sbjct: 572 GRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAH 631

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-W 245
            G +  G + H   +K  Y   P      S+++++ + G + AA+     M  +   + W
Sbjct: 632 AGLVDEG-LRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVW 690

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS-------LCADSLLLREGR 298
            +++    L G  E       EM L+   +P  +    L+S       L +D+  LR+G 
Sbjct: 691 RSLLSACHLFGNVEIG-RYATEMALL--ADPADSGPSVLMSNIYASRGLWSDAQKLRQGM 747

Query: 299 SVHGYAIRRLLGYDLL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
              G  + +  GY  + +M  +  F ++     +A+++++ +  +  ++
Sbjct: 748 DCAG--VVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSIL 794


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 225/739 (30%), Positives = 379/739 (51%), Gaps = 54/739 (7%)

Query: 86  MNCLKQGRV------VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           ++CL   R+       H  ++ +G++ D  L N+ +  Y+K G L  +   F  M   + 
Sbjct: 37  LSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNL 96

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSG------EQADNVSLSSAVAASACLGELSYG 193
           VSW + +S    +   +  LL F     +G      E  +   L+SA+ A A      +G
Sbjct: 97  VSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFG 156

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + +H +  KLG + + +V    +L+++Y++ G I+AA   F  +  ++ V+W A+I G++
Sbjct: 157 EQVHGVAAKLGLDANVFVG--TALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYS 214

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G+   A +L   M L   V PD   + +  S C+    +  GR +HGYA R     D 
Sbjct: 215 QAGQAGVALELFGRMGL-DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDA 273

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ 365
            ++N+L+D Y K + L  A  LF+++   N LVSW +MI+G  +         M +  SQ
Sbjct: 274 SVVNALIDLYCKCSRLLLARRLFDSMENRN-LVSWTTMIAGYMQNSLDTEAMSMFWQLSQ 332

Query: 366 FSFSTLL----AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             +   +    +IL SC S  ++  G+ +H   +K    ++    NAL+ MY  C  L  
Sbjct: 333 AGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTE 392

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI--- 478
           A ++ + ++ + D   +N +I    + G    A++ F  M +  +  P  +T V+++   
Sbjct: 393 ARAVFEALAED-DAISYNAMIEGYARLGDLTGAVEIFGKM-RYCSLKPSLLTFVSLLGVS 450

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S+  +LEL+   K +HGL +KS   LD    +ALI +Y +   +  A  VF    N ++ 
Sbjct: 451 SSRSDLELS---KQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMV 507

Query: 539 TWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN MI   +QN+    A++LF  L      PNE + V++++  + L  + HG+Q H  +
Sbjct: 508 IWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQI 567

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G   +  IS+AL+DMY+ C               K    W+SMIS Y  HG   EA+
Sbjct: 568 IKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEAL 627

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            +F  M  +G+ P   + +S+LSAC+H+GLVDEGL ++N+M  +Y V P TEH+  +V++
Sbjct: 628 HVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNL 687

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
            GRSGKL  A EFI+ +PI+P   +W ++LSAC   G+ ++G+   E+    +P + G  
Sbjct: 688 FGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPS 747

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + +SN+Y + G W DA ++
Sbjct: 748 VLMSNIYASKGLWADAQKL 766



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 194/704 (27%), Positives = 322/704 (45%), Gaps = 52/704 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L  +  LL  YS +     +  LF    ++++V+W + I+   ++      L  F
Sbjct: 60  GLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLF 119

Query: 62  ------GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
                 G    +G   +   L   + A  Q    + G  VH ++ K G+ A+  +    V
Sbjct: 120 AAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALV 179

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           N+YAK G ++++   F  +   + V+W  +++G          L  F  MG  G + D  
Sbjct: 180 NLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRF 239

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
            L+SA +A + LG +  G+ IH    +   E     SV N+LI +Y +C  +  A R F 
Sbjct: 240 VLASAASACSGLGFVEGGRQIHGYAYRTAAESD--ASVVNALIDLYCKCSRLLLARRLFD 297

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  +++VSW  +I G+  N    EA  +  ++      +PD+    ++++ C     + 
Sbjct: 298 SMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLS-QAGWQPDVFACTSILNSCGSLAAIW 356

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           +GR VH + I+  L  D  + N+L+D Y+K   L++A  +F A+A  +D +S+N+MI G 
Sbjct: 357 QGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAE-DDAISYNAMIEGY 415

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      +F +M Y   + S  T +++L   +S   LE  K IH   +K G S + 
Sbjct: 416 ARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDL 475

Query: 404 IGVNALMHMYIN---CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
              +AL+ +Y       D    FSL+Q    N D   WN +I    QN   +EA+K F  
Sbjct: 476 YAGSALIDVYSKFSLVDDAKLVFSLMQ----NRDMVIWNAMIFGLAQNERGEEAVKLFAR 531

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           + +    +P+  T V +++    L   F G+  H   +K+    D  + NALI MY +C 
Sbjct: 532 L-RVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCG 590

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
            I+    +FES    ++  WN MIS ++Q+     AL +F  +E    EPN ++ VS+LS
Sbjct: 591 FIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLS 650

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGW 637
           AC   G++  G     H F+           ++   Y+       ++S+++ +G  GK  
Sbjct: 651 ACAHAGLVDEGL----HHFN-----------SMKTKYAVEPGTEHYASVVNLFGRSGKLH 695

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            A E    M    I P  +   SLLSAC   G V+ G +Y   M
Sbjct: 696 AAKEFIERMP---IEPVATIWRSLLSACHLFGNVEIG-RYATEM 735



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 191/419 (45%), Gaps = 39/419 (9%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+S  A   L R     H  A+   L  DL + N L+  YSK   L  A  LF+++ P  
Sbjct: 36  LLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSM-PSR 94

Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFST-------------LLAILPSCNSPESLE 385
           +LVSW S IS     G   + L L + F  +              L + L +C    +  
Sbjct: 95  NLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAAR 154

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           FG+ +H    KLG   N     AL+++Y   G + AA S+   +   +  + W  VI   
Sbjct: 155 FGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVT-WTAVITGY 213

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +Q G    A++ F  M       PD   L +  SAC  L     G+ +HG A ++    D
Sbjct: 214 SQAGQAGVALELFGRMG-LDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESD 272

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE- 564
             V NALI +Y +C  +  A  +F+S  N NL +W  MI+ + QN  +  A+ +F  L  
Sbjct: 273 ASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQ 332

Query: 565 --FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---- 618
             ++P+  +  SIL++C  L  +  G+Q+H HV     + + ++ +AL+DMY+ C+    
Sbjct: 333 AGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTE 392

Query: 619 -----------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                         ++++MI  Y   G    A+E+F +M    ++P+  + +SLL   S
Sbjct: 393 ARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSS 451


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 236/792 (29%), Positives = 403/792 (50%), Gaps = 58/792 (7%)

Query: 27   LALFYETCNKDVVTWNAMITACVENRCVVMGLHF--FGEMVEEGIRFDSTTLLIIVSALT 84
            L LF E  ++   TW   ++ CV  RC   G  F     M E G+      L  +V+A  
Sbjct: 297  LHLFDEMADRTPSTWYTAVSGCV--RCGSHGKAFEMLRGMREPGVPLSGFALASLVTA-- 352

Query: 85   QMNCLKQGR--------VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
               C ++GR         +H L+ +AG++ +  +    +++Y   G ++ ++  F  M  
Sbjct: 353  ---CERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE 409

Query: 137  ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
             + VSW  +M     N Y E+ L  +R+M   G   +  + ++ V+    L     G  +
Sbjct: 410  RNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQV 469

Query: 197  HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
             +  I  G ++   VSV NSLI+M+   G +  AE+ F  M   D +SWNA+I  ++  G
Sbjct: 470  ASQVIVSGLQNQ--VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQG 527

Query: 257  KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
               + F +  +M+    + PD  T+ +L+S+CA S     G  +H   +R  L   + ++
Sbjct: 528  ICSKCFLVFSDMR-HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVI 586

Query: 317  NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK------------EMLYLCS 364
            N+L++ YS +  LS AE LF  ++   DL+SWN+MIS   +            ++ +   
Sbjct: 587  NALVNMYSAAGKLSDAEFLFWNMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 645

Query: 365  QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
              +  T  + L +C+SP +L  GK +H   L+L    N +  N+L+ MY  C  +  A  
Sbjct: 646  SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 705

Query: 425  LLQRISHNSDTSCWNIVI--VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI-SAC 481
            + Q +    D   +N++I   A  ++G   +A++ F  M +     P+ +T++N+  S  
Sbjct: 706  VFQSMP-THDIVSYNVLIGGYAVLEDG--TKAMQVFSWM-RSAGIKPNYITMINIHGSFA 761

Query: 482  GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             + +L   G+ LH   +++    D  V N+LITMY +C +++S++ +F S  N N+ +WN
Sbjct: 762  SSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWN 821

Query: 542  CMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVFHL 598
             +I+A  Q      AL+LF  ++   N++  V +   LS+C  L  L  G Q+HG     
Sbjct: 822  AIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKS 881

Query: 599  GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
            G   +S++ +A +DMY  C               +    W+++IS Y  +G   EA E F
Sbjct: 882  GLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETF 941

Query: 644  HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             +M  +G +P   + ++LLSACSH+GLVD+G+ YYN+M   + V P  +H VCIVD+LGR
Sbjct: 942  KQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGR 1001

Query: 704  SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
             G+  EA +FI+ +P+ P   +W ++LS+   H + ++G++ A+ L +L+P +   Y+ L
Sbjct: 1002 LGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLL 1061

Query: 764  SNMYVALGRWKD 775
            SN+Y    RW D
Sbjct: 1062 SNLYATNARWAD 1073



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 176/605 (29%), Positives = 301/605 (49%), Gaps = 26/605 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +      +  LF+E   ++VV+W A++ A   N  +   L  +
Sbjct: 376 GLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAY 435

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  +G+  ++     +VS    +     G  V    I +G+    S+ N  + M+   
Sbjct: 436 RQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNL 495

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +E  F  M   DT+SWN ++S   H     KC L F +M   G + D  +L S +
Sbjct: 496 GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 555

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A     S+G  IH+L ++   + S  V+V N+L++MYS  G +  AE  FW M+ +D
Sbjct: 556 SVCASSDHFSHGSGIHSLCLRSSLDSS--VTVINALVNMYSAAGKLSDAEFLFWNMSRRD 613

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSV 300
           ++SWN +I  +  N    +A   L   QL  + E P+  T  + +  C+    L +G+ V
Sbjct: 614 LISWNTMISSYVQNCNSTDALKTLG--QLFHTNESPNHLTFSSALGACSSPGALIDGKMV 671

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L  +LL+ NSL+  Y K NS+  AE +F ++ P +D+VS+N +I G      
Sbjct: 672 HAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSM-PTHDIVSYNVLIGGYAVLED 730

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGVN 407
                 +F  M     + ++ T++ I  S  S   L  +G+ +H + ++ GF ++    N
Sbjct: 731 GTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVAN 790

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY  CG+L ++ ++   I+ N +   WN +I A  Q GH +EA+K F  M    N 
Sbjct: 791 SLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGN- 848

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-S 526
             D V L   +S+C +L    EG  LHGL +KS +  D+ V NA + MYG+C  +     
Sbjct: 849 KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQ 908

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG 583
            V +       C WN +IS +++      A E F+ +     +P+ ++ V++LSAC+  G
Sbjct: 909 VVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAG 967

Query: 584 VLRHG 588
           ++  G
Sbjct: 968 LVDKG 972



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/457 (22%), Positives = 196/457 (42%), Gaps = 40/457 (8%)

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV--SWNSMISGLFK 357
           +HG A+R  L       N+L+ FY +    S A    +    M D    +W + +SG  +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 358 --------EMLY-------LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                   EML          S F+ ++L+         E +  G +IH    + G   N
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                AL+H+Y + G +  A  L   +   +  S W  ++VA + NG+ +EA++ ++ M 
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVS-WTALMVALSSNGYLEEALRAYRQM- 438

Query: 463 QQQNASP-DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +++  P ++     V+S CG+LE    G  +    + S +     V N+LITM+G    
Sbjct: 439 -RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGR 497

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           +  A  +F+     +  +WN MIS +S      +   +F   RH    P+  ++ S++S 
Sbjct: 498 VHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSV 557

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C       HG  IH          +  + +AL++MYS                 +   +W
Sbjct: 558 CASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 617

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++MIS+Y  +    +A++   ++ ++   P   +  S L ACS  G + +G   +  +L 
Sbjct: 618 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVL- 676

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +  ++        ++ M G+   +++A +  +++P  
Sbjct: 677 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 227/801 (28%), Positives = 401/801 (50%), Gaps = 48/801 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y   S  + +  +F     +DVV+W AMI+A  +       L  F EM    +  +
Sbjct: 39  LVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPN 98

Query: 73  STTLLIIVSALTQMNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
             T L ++ A      L+ G+ +H  +S    + +D  + N  + MY KC   + +   F
Sbjct: 99  RVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVF 158

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE-- 189
           S M   D +SWN  ++    +      L   + M   G   D V+  SA+  +AC+G   
Sbjct: 159 SEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSAL--NACIGSRS 216

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS G++IHAL ++ G E    V +  +L++MY +CG +E+A   F  M  ++VVSWNA++
Sbjct: 217 LSNGRLIHALVLERGMEGD--VVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMV 274

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
               LN  F EA +L   M  +  VEP   + +T+++       L EGR +H     R L
Sbjct: 275 ASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQL 334

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
              + + N+L+  Y +   +  AE +F+A+    DLVSWN+MIS     GL +E++ L  
Sbjct: 335 LSQIEVANALVTMYGRCGGVGDAERVFSAM-ERRDLVSWNAMISAYAQSGLAREVVNLFH 393

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           T L  L +C     L+ G+++H   ++ GF +     NA MH+Y +C 
Sbjct: 394 RMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCS 453

Query: 418 DLVAAFSLLQRISHN-------SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
              ++ S L  +           D   WN +I    Q G    A+  FK M  +     +
Sbjct: 454 SSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLE-GIRGN 512

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYGRCRDIKSASTV 528
            VT ++++S C +     +G+++H   +     L  D  V  A++ MYG+C ++ +A  +
Sbjct: 513 QVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHL 572

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           FE   + NL +WN MISA++ +    +A +L   +  E   P+ ++ +++L+AC   G +
Sbjct: 573 FEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAV 632

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           RHGK IH  +   G ++++ +++AL++ YS C               +   +W+ +I+ +
Sbjct: 633 RHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGF 692

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
            ++G   EA++    M   G+RP   + +++LSA SH+G + +G   + +M  ++++   
Sbjct: 693 AHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERG 752

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C++D+LGR+G++ +A  F+  +  + K   W  +LSAC  HGD +  K+VA  + 
Sbjct: 753 VEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIV 812

Query: 751 KLEPENVGYYISLSNMYVALG 771
           ++ P++   Y++LSN+Y   G
Sbjct: 813 EMNPQHSSAYVALSNLYATCG 833



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 173/608 (28%), Positives = 306/608 (50%), Gaps = 32/608 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +P + +++  Y      + ++A+F E   +D+++WN  I A  E+      L     M  
Sbjct: 135 VPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQL 194

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+  D  T +  ++A      L  GR++H L ++ GM  D  L    V MY +CG L S
Sbjct: 195 EGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLES 254

Query: 127 SECTFSGMHCADTVSWNTIMSGC-LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F  M   + VSWN +++ C L+ ++ E   L+ R +  +  +   VS  + + A  
Sbjct: 255 AREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVT 314

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L+ G+ IHA+  +   +    + V N+L++MY +CG +  AER F  M  +D+VSW
Sbjct: 315 TPEALAEGRRIHAMIQE--RQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSW 372

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA+I  +A +G   E  +L H M+  R V PD  T +  +  CA+   L  GR+VH  ++
Sbjct: 373 NAMISAYAQSGLAREVVNLFHRMRAER-VPPDRITFLMALDACAEIRDLDSGRTVHHLSV 431

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAEL--------LFNAIAPMNDLVSWNSMISG--- 354
               G  + + N+ M  YS  +S S +          +F ++A   D++SWN+MI+G   
Sbjct: 432 ESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAA-RDVISWNTMITGYVQ 490

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNT 403
                    +FK ML    + +  T +++L  C+S   L  G++IH   +      S++ 
Sbjct: 491 AGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDP 550

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           I   A+++MY  CG+L  A  L +  SH  + + WN +I A   +G  ++A    + M +
Sbjct: 551 IVAAAIVNMYGKCGELDTARHLFEDTSHR-NLASWNSMISAYALHGRAEQAFDLSERM-R 608

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           ++   PD VT + +++AC        GK +H   + S +  DT V NAL+  Y +C ++ 
Sbjct: 609 REGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLD 668

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACT 580
           +A+++F +    ++ +WN +I+ F+ N   +  ++++ L +     P+ I+ ++ILSA +
Sbjct: 669 TATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASS 728

Query: 581 QLGVLRHG 588
             G LR G
Sbjct: 729 HAGFLRQG 736



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 188/702 (26%), Positives = 320/702 (45%), Gaps = 64/702 (9%)

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L+QGR VH    +          N  VNMY +C  L+ +   F  M   D VSW  ++S
Sbjct: 13  ALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMIS 72

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL--GIKLGY 205
                 +  + L  F EM  S    + V+  + + A      L  GK IHA    ++L  
Sbjct: 73  AYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLE 132

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            D P   V N+++ MY +C   + A   F  M  +D++SWN  I   A +G +     LL
Sbjct: 133 SDVP---VANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALL 189

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             MQL   + PD  T V+ ++ C  S  L  GR +H   + R +  D+++  +L+  Y +
Sbjct: 190 KSMQL-EGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGR 248

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC----SQFSFS 369
              L  A  +F+ + P  ++VSWN+M++             LFK M+ +     ++ SF 
Sbjct: 249 CGCLESAREIFHRM-PERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFI 307

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLL 426
           T   +L +  +PE+L  G+ IH    +    +     NAL+ MY  C   GD    FS +
Sbjct: 308 T---VLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAM 364

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           +R     D   WN +I A  Q+G  +E +  F  M + +   PD +T +  + AC  +  
Sbjct: 365 ER----RDLVSWNAMISAYAQSGLAREVVNLFHRM-RAERVPPDRITFLMALDACAEIRD 419

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD--------IKSASTVFESCYNCNLC 538
              G+++H L+++S  G    V NA + +Y  C          ++  + +FES    ++ 
Sbjct: 420 LDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVI 479

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN MI+ + Q      AL +F+ +  E    N+++ +S+LS C     LR G+ IH  V
Sbjct: 480 SWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRV 539

Query: 596 FHLG--FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +       +  +++A+++MY  C               ++ A+W+SMISAY  HG+  +
Sbjct: 540 INQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQ 599

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A +L   M   G+ P + + I+LL+AC   G V  G   +  +++   +  +T     +V
Sbjct: 600 AFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDS-GLEKDTVVANALV 658

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           +   + G L  A      L  +     W  +++  +H+G  +
Sbjct: 659 NFYSKCGNLDTATSLFGALDYRDVVS-WNGIIAGFAHNGHAR 699



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 178/639 (27%), Positives = 294/639 (46%), Gaps = 59/639 (9%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  G+ +H  G    + D   +   N L++MY +C  ++ A + F  M  +DVVSW A
Sbjct: 12  GALEQGRRVH--GHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTA 69

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY-AIR 306
           +I  +A  G   +A DL  EM    S++P+  T + L+  C     L +G+ +H   +  
Sbjct: 70  MISAYAQTGHQRQALDLFTEMA-GSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSAL 128

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLY 361
           +LL  D+ + N++M  Y K      A  +F+ +    DL+SWN+ I     SG +   L 
Sbjct: 129 QLLESDVPVANAVMGMYRKCERADLAMAVFSEMRE-RDLISWNNAIAANAESGDYTFTLA 187

Query: 362 LCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L              T ++ L +C    SL  G+ IH   L+ G   + +   AL+ MY 
Sbjct: 188 LLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYG 247

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L +A  +  R+   +  S WN ++ +CT N HF EAI+ FK M       P  V+ 
Sbjct: 248 RCGCLESAREIFHRMPERNVVS-WNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSF 306

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           + V++A    E   EG+ +H +  +  +     V NAL+TMYGRC  +  A  VF +   
Sbjct: 307 ITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMER 366

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            +L +WN MISA++Q+      + LF  +  E   P+ I+ +  L AC ++  L  G+ +
Sbjct: 367 RDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTV 426

Query: 592 HGHVFHLGFQENSFISSALLDMYSN-----------------------CKSNAAWSSMIS 628
           H      GF     +++A + +YS+                        +   +W++MI+
Sbjct: 427 HHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMIT 486

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y   G  + A+ +F  M   GIR  + + +SLLS C     + +G   +  ++ +    
Sbjct: 487 GYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQT--- 543

Query: 689 PETEHH----VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           PE          IV+M G+ G+L  A    ++         W +M+SA + HG  +    
Sbjct: 544 PELSSDPIVAAAIVNMYGKCGELDTARHLFEDTS-HRNLASWNSMISAYALHGRAEQAFD 602

Query: 745 VAELLFK--LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++E + +  + P+ V  +I+L N  VA G    AV  GK
Sbjct: 603 LSERMRREGVLPDRV-TFITLLNACVAGG----AVRHGK 636



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 165/640 (25%), Positives = 284/640 (44%), Gaps = 60/640 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +   T+L+T Y      ES+  +F+    ++VV+WNAM+ +C  N      +  
Sbjct: 230 RGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIEL 289

Query: 61  FGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  MV    +     + + +++A+T    L +GR +H +  +  +++   + N  V MY 
Sbjct: 290 FKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYG 349

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CG +  +E  FS M   D VSWN ++S    +    + +  F  M       D ++   
Sbjct: 350 RCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLM 409

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD--------IEAAE 231
           A+ A A + +L  G+ +H L ++ G+     +SV N+ + +YS C          +E   
Sbjct: 410 ALDACAEIRDLDSGRTVHHLSVESGF--GSCISVANATMHLYSSCSSSSSSSSSLMEVVA 467

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  M  +DV+SWN +I G+   G    A  +   M L+  +  +  T ++L+S+C   
Sbjct: 468 GIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRM-LLEGIRGNQVTFMSLLSVCDSR 526

Query: 292 LLLREGRSVHGYAIRRL--LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
             LR+G ++H   I +   L  D ++  ++++ Y K   L  A  LF   +  N L SWN
Sbjct: 527 AFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRN-LASWN 585

Query: 350 SMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKL 397
           SMIS     G  ++   L  +           T + +L +C +  ++  GK IH   +  
Sbjct: 586 SMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDS 645

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G   +T+  NAL++ Y  CG+L  A SL   + +  D   WN +I     NGH +EA+K+
Sbjct: 646 GLEKDTVVANALVNFYSKCGNLDTATSLFGALDYR-DVVSWNGIIAGFAHNGHAREALKS 704

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
              M QQ    PD++T + ++SA  +     +G    G    S M +D  ++   +  YG
Sbjct: 705 MWLM-QQDGVRPDAITFLTILSASSHAGFLRQG----GDDFVS-MAVDHELERG-VEHYG 757

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                                   CMI    +      A      +  E  E+S +++LS
Sbjct: 758 ------------------------CMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMTLLS 793

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           AC   G     K++ G +  +  Q +S    AL ++Y+ C
Sbjct: 794 ACEVHGDEERAKRVAGSIVEMNPQHSSAY-VALSNLYATC 832



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 204/426 (47%), Gaps = 41/426 (9%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+  C  S  L +GR VHG+  R      L   N L++ Y + +SL +A  +F+ +    
Sbjct: 4   LMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRE-R 62

Query: 344 DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           D+VSW +MIS             LF EM       +  T LA+L +C+SPE LE GK IH
Sbjct: 63  DVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIH 122

Query: 392 CWQLKLGFSNNTIGV-NALMHMYINC--GDL-VAAFSLLQRISHNSDTSCWNIVIVACTQ 447
                L    + + V NA+M MY  C   DL +A FS ++      D   WN  I A  +
Sbjct: 123 ARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMR----ERDLISWNNAIAANAE 178

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +G +   +   KSM Q +  +PD VT V+ ++AC        G+ +H L L+  M  D  
Sbjct: 179 SGDYTFTLALLKSM-QLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVV 237

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---- 563
           +  AL+TMYGRC  ++SA  +F      N+ +WN M+++ + N     A+ELF+ +    
Sbjct: 238 LGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 297

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
             EP  +S +++L+A T    L  G++IH  +          +++AL+ MY  C      
Sbjct: 298 MVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDA 357

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    +   +W++MISAY   G   E + LFH M    + P + + +  L AC+  
Sbjct: 358 ERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEI 417

Query: 669 GLVDEG 674
             +D G
Sbjct: 418 RDLDSG 423



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 15/119 (12%)

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--------------- 619
           ++ AC   G L  G+++HGHV       + F  + L++MY  C S               
Sbjct: 4   LMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERD 63

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
             +W++MISAY   G   +A++LF EM  S + P + + ++LL AC     +++G Q +
Sbjct: 64  VVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIH 122


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 237/805 (29%), Positives = 400/805 (49%), Gaps = 71/805 (8%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
             F  +L   T+L+  Y+       +  +  +    D+VTWNA+I+    N          
Sbjct: 375  AFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVL 434

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +++E G++ + +T   I+   T+M CL  G+ +H   +K+G  +D  L    ++MYA  
Sbjct: 435  RQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGG 494

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G+L  +   F      + V WN+++S    N    +    F++M  +  Q + V+  S +
Sbjct: 495  GNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSII 554

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                       GK +HA  +K  Y     +SV  +L+SMY++ GD  +A   F+ M  K 
Sbjct: 555  PCCENSANFWXGKSLHAHVMK--YRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKT 612

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
                +++I G+ +       F +   M L                       ++ G+   
Sbjct: 613  SYR-DSMISGYGIMSMGRPFFWVRLLMHLA----------------------IKTGKEFD 649

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                       L + N+L+ FYS    LS +  LF  + P+ + +SWN++ISG       
Sbjct: 650  SX---------LNISNALLAFYSDCGKLSSSFKLFQKM-PLRNAISWNTLISGCVHNGDT 699

Query: 355  -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 L  +M     +    TL++I+P C   E+L  G ++H + +K GF+ +   VNAL
Sbjct: 700  KKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNAL 759

Query: 410  MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            + MY NCGD+ A   L + +   S  S WN +I     +    E + +F  M  +    P
Sbjct: 760  ISMYFNCGDINAGKFLFEVMPWRSIVS-WNALITGYRFHYLQNEVMASFCQMIXE-GQKP 817

Query: 470  DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
            + VTL+N++ +C  L    +GKS+H  A+++ + ++T +  +LI+MY R  +I S   +F
Sbjct: 818  NYVTLLNLLPSCXTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLF 874

Query: 530  ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
            E     ++  WN ++S + Q K    ++  F    H   EP+ I+ +S++SAC QL  L 
Sbjct: 875  EMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLN 934

Query: 587  HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
                +  +V   GF ++  IS+AL+D+++ C               K   +WS+MI+ YG
Sbjct: 935  LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYG 994

Query: 632  YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             HG    A+ L  +M  SG++P   +  S+LSACSH G +D+G   +N+M+EE  V    
Sbjct: 995  LHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRM 1053

Query: 692  EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            EH+ C+VD+LGR+G+L EAY+F++ LP +P   +  ++L AC  HG+ K+G+++  LLF+
Sbjct: 1054 EHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFE 1113

Query: 752  LEPENVGYYISLSNMYVALGRWKDA 776
            L+P+N G Y+ L N+Y A GRW DA
Sbjct: 1114 LDPKNSGSYVMLYNIYAAAGRWMDA 1138



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 178/718 (24%), Positives = 331/718 (46%), Gaps = 60/718 (8%)

Query: 72   DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            D  T   ++ A + +  +     VHC+ ++     +  +    V+ YAK G +  +    
Sbjct: 344  DDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVL 403

Query: 132  SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
              +   D V+WN ++SG   N + ++     R++   G + +  + +S +     +  L 
Sbjct: 404  DKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLD 463

Query: 192  YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             GK IH   +K G+    +  +T +LISMY+  G++  A   F     K+VV WN++I  
Sbjct: 464  IGKSIHGFVVKSGFSSDEF--LTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISA 521

Query: 252  FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            +A N K  EAF +  +M L  +++P++ T V++I  C +S     G+S+H + ++  L  
Sbjct: 522  YAQNQKSSEAFKMFQQM-LKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDS 580

Query: 312  DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
             L +  +L+  Y+K    + A  +F  +         +SMISG    ++ +   F +  L
Sbjct: 581  QLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSY--RDSMISGY--GIMSMGRPFFWVRL 636

Query: 372  LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            L  L       +++ GK          F +     NAL+  Y +CG L ++F L Q++  
Sbjct: 637  LMHL-------AIKTGKE---------FDSXLNISNALLAFYSDCGKLSSSFKLFQKMPL 680

Query: 432  NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +  S WN +I  C  NG  ++A+     M QQ+    D VTL+++I  C   E   +G 
Sbjct: 681  RNAIS-WNTLISGCVHNGDTKKAVALLHKM-QQEKMELDLVTLISIIPICRVXENLIQGM 738

Query: 492  SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +LHG A+K+    D  + NALI+MY  C DI +   +FE     ++ +WN +I+ +  + 
Sbjct: 739  TLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHY 798

Query: 552  AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             +   +  F  +  E   PN ++++++L +C     L  GK IH      G    + I +
Sbjct: 799  LQNEVMASFCQMIXEGQKPNYVTLLNLLPSCX---TLLQGKSIHAFAVRTGVIVETPIIT 855

Query: 609  ALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +L+ MY+  ++                A W++++S Y       E++  F E+ ++ + P
Sbjct: 856  SLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEP 915

Query: 654  TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQE 709
               + +SL+SAC     ++      +N +  Y ++   + H+ I    +D+  R G +  
Sbjct: 916  DYITFLSLISACVQLSSLN-----LSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISI 970

Query: 710  AYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAE--LLFKLEPENVGYYISLS 764
            A +  + L    K  V W  M++    HGD++    +     L  ++P+ + Y   LS
Sbjct: 971  AKKIFEGL--SSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLS 1026



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 185/429 (43%), Gaps = 63/429 (14%)

Query: 354 GLFKEML--YL------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
           GLF+++L  YL      C    F T   ++ +C++  ++   + +HC  L+  F  N + 
Sbjct: 324 GLFEDVLCVYLKCRVLGCPSDDF-TFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVI 382

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+  Y   G +V A  +L +IS   D   WN +I   + NG  +E  +  + + +  
Sbjct: 383 QTALVDFYAKTGRMVKARLVLDKISQ-PDLVTWNALISGYSLNGFDKEVFEVLRQILEM- 440

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P+  T  ++I  C  ++    GKS+HG  +KS    D  +  ALI+MY    ++  A
Sbjct: 441 GLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIA 500

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQL 582
             +F+S    N+  WN MISA++QN+    A ++F+ +     +PN ++ VSI+  C   
Sbjct: 501 RDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENS 560

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMIS 628
                GK +H HV          +++ALL MY+                +  +   SMIS
Sbjct: 561 ANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMIS 620

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            YG    G               RP     + +  A       D  L   N +L  Y   
Sbjct: 621 GYGIMSMG---------------RPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFY--- 662

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
                           GKL  +++  + +P++     W  ++S C H+GDTK  K VA L
Sbjct: 663 -------------SDCGKLSSSFKLFQKMPLRNAIS-WNTLISGCVHNGDTK--KAVA-L 705

Query: 749 LFKLEPENV 757
           L K++ E +
Sbjct: 706 LHKMQQEKM 714


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/719 (29%), Positives = 368/719 (51%), Gaps = 55/719 (7%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G  +H    K+G+  D S+ N  +N+Y+KC     +          D VSW+ ++SG
Sbjct: 72  LRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISG 131

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N      L+ F EM   G + +  + SS + A + + +L  GK +H + +  G+E  
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD 191

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V+  N+L+ MY++C +   ++R F  +  ++VVSWNA+   +       EA  L +EM
Sbjct: 192 VFVA--NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEM 249

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            ++  ++P+  ++ ++++ C        G+ +HGY I+    +D    N+L+D Y+K   
Sbjct: 250 -VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFSTLLAILPSCNSPES 383
           L+ A  +F  I    D+VSWN++I+G       ++ L L  Q                  
Sbjct: 309 LADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMK---------------- 351

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNI 440
               + +H   +K+   ++      L+ MY  C    D   AF+LL       D   WN 
Sbjct: 352 ----RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE----KDLIAWNA 403

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I   +Q     EA+  F  M  ++    +  TL  ++ +   L++    + +HGL++KS
Sbjct: 404 IISGYSQYWEDMEALSLFVEM-HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 462

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               D  V N+LI  YG+C  ++ A  +FE C   +L ++  MI+A++Q      AL+LF
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522

Query: 561 ---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
              + +E +P+     S+L+AC  L     GKQ+H H+   GF  + F  ++L++MY+ C
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 582

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +   +WS+MI     HG G +A++LF++M   G+ P   +++S+L
Sbjct: 583 GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVL 642

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            AC+H+GLV E   Y+ +M E +  +P  EH+ C++D+LGR+GK+ EA E +  +P +  
Sbjct: 643 GACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN 702

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             VWGA+L A   H D ++G++ AE+LF LEPE  G ++ L+N+Y + G+W++  E+ +
Sbjct: 703 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRR 761



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 204/732 (27%), Positives = 338/732 (46%), Gaps = 73/732 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS    F  +  L  E+   D+V+W+A+I+   +N      L  F EM   G++ +
Sbjct: 97  LINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCN 156

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   ++ A + +  L+ G+ VH + + +G   D  + N  V MYAKC +   S+  F 
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + VSWN + S  +  ++  + +  F EM  SG + +  SLSS V A   L + S 
Sbjct: 217 EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSR 276

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK+IH   IKLGY+  P+ +  N+L+ MY++ GD+  A   F  +   D+VSWNA+I G 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSA--NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
            L+   E+A +LL +M+                            R +H   ++  +  D
Sbjct: 335 VLHEHHEQALELLGQMK----------------------------RQLHSSLMKMDMESD 366

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L +   L+D YSK + L  A + FN + P  DL++WN++ISG            LF EM 
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFN-LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                F+ +TL  IL S    + +   + +H   +K GF ++   VN+L+  Y  C  + 
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 485

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + +  +   D   +  +I A  Q G  +EA+K F  M Q     PD     ++++A
Sbjct: 486 DAERIFEECT-IGDLVSFTSMITAYAQYGQGEEALKLFLEM-QDMELKPDRFVCSSLLNA 543

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C NL    +GK LH   LK    LD    N+L+ MY +C  I  A   F       + +W
Sbjct: 544 CANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSW 603

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           + MI   +Q+    +AL+LF  +  E   PN I++VS+L AC   G++   K        
Sbjct: 604 SAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK-------- 655

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           L F+       ++ +++        ++ MI   G  GK  EA+EL ++M         S 
Sbjct: 656 LYFE-------SMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKM---PFEANASV 705

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGK---LQEAYEF 713
             +LL A      V+ G +    +   + + PE    HV + ++   +GK   + E    
Sbjct: 706 WGALLGAARIHKDVELGRRAAEML---FILEPEKSGTHVLLANIYASAGKWENVAEVRRL 762

Query: 714 IKNLPIQPKPGV 725
           +++  ++ +PG+
Sbjct: 763 MRDSKVKKEPGM 774



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 165/583 (28%), Positives = 279/583 (47%), Gaps = 52/583 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + +L+  Y+    F  S  LF E   ++VV+WNA+ +  V+       +  F
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLF 246

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EMV  GI+ +  +L  +V+A T +    +G+++H   IK G   D    N  V+MYAK 
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  +   D VSWN +++GC+ + + E+ L                      
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQAL---------------------- 344

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                LG++   + +H+  +K+  E   +VSV   L+ MYS+C  +E A  AF  +  KD
Sbjct: 345 ---ELLGQMK--RQLHSSLMKMDMESDLFVSV--GLVDMYSKCDLLEDARMAFNLLPEKD 397

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++WNAII G++   +  EA  L  EM     +  +  T+ T++   A   ++   R VH
Sbjct: 398 LIAWNAIISGYSQYWEDMEALSLFVEMH-KEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 456

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G +++     D+ ++NSL+D Y K + +  AE +F     + DLVS+ SMI+        
Sbjct: 457 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECT-IGDLVSFTSMITAYAQYGQG 515

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM  +  +       ++L +C +  + E GK +H   LK GF  +    N+L
Sbjct: 516 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 575

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY  CG +  A      ++     S W+ +I    Q+GH ++A++ F  M  ++  SP
Sbjct: 576 VNMYAKCGSIDDAGRAFSELTERGIVS-WSAMIGGLAQHGHGRQALQLFNQML-KEGVSP 633

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-S 526
           + +TLV+V+ AC +  L  E K L+  +++ L G     ++   +I + GR   I  A  
Sbjct: 634 NHITLVSVLGACNHAGLVTEAK-LYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 692

Query: 527 TVFESCYNCNLCTWNCMISAFSQNK-AEV--RALELFRHLEFE 566
            V +  +  N   W  ++ A   +K  E+  RA E+   LE E
Sbjct: 693 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPE 735



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 241/570 (42%), Gaps = 104/570 (18%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   +   L+S C  +  LR G  +H +  +  L  D  + N L++ YSK      A  L
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 336 FNAIAPMNDLVSWNSMISGL------------FKEMLYL---CSQFSFSTLLAILPSCNS 380
            +  +   DLVSW+++ISG             F EM  L   C++F+FS+   +L +C+ 
Sbjct: 114 VDE-SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS---VLKACSI 169

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            + L  GK +H   +  GF  +    N L+ MY  C + + +  L   I   +  S WN 
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVS-WNA 228

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +     Q     EA+  F  M       P+  +L ++++AC  L  +  GK +HG  +K 
Sbjct: 229 LFSCYVQXDFCGEAVGLFYEMV-LSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               D    NAL+ MY +  D+  A +VFE     ++ +WN +I+    ++   +ALEL 
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL- 346

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
                                LG ++  +Q+H  +  +  + + F+S  L+DMYS C   
Sbjct: 347 ---------------------LGQMK--RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       K   AW+++IS Y  + +  EA+ LF EM   GI   ++++ ++L + 
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443

Query: 666 S-----------HSGLVDEGLQ----YYNNMLEEYDVRPETEH---------------HV 695
           +           H   V  G        N++++ Y      E                  
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503

Query: 696 CIVDMLGRSGKLQEAYEF---IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
            ++    + G+ +EA +    ++++ ++P   V  ++L+AC++    + GKQ+   + K 
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY 563

Query: 753 EPENVGYYI------SLSNMYVALGRWKDA 776
                G+ +      SL NMY   G   DA
Sbjct: 564 -----GFVLDIFAGNSLVNMYAKCGSIDDA 588



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 35/347 (10%)

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           ++  + N +P SV+   ++S C   +    G  +H    KS +  D  ++N LI +Y +C
Sbjct: 45  NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC 104

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSIL 576
           R    A  + +     +L +W+ +IS ++QN     AL  F  +     + NE +  S+L
Sbjct: 105 RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+ +  LR GKQ+HG V   GF+ + F+++ L+ MY+ C               ++  
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD--EGLQYYN 679
           +W+++ S Y       EA+ LF+EM  SGI+P + S+ S+++AC  +GL D   G   + 
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHG 282

Query: 680 NMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC---SH 735
            +++  YD  P + +   +VDM  + G L +A    + +  QP    W A+++ C    H
Sbjct: 283 YLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEH 339

Query: 736 HGDT-----KMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDA 776
           H        +M +Q+   L K++ E ++   + L +MY      +DA
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 386



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 544 ISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +  FS++      L L     F P  +S   +LS C     LR G QIH H+   G  ++
Sbjct: 31  VPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90

Query: 604 SFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCN 648
             I + L+++YS C+                  +WS++IS Y  +G G  A+  FHEM  
Sbjct: 91  PSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150

Query: 649 SGIRPTKSSVISLLSACS 666
            G++  + +  S+L ACS
Sbjct: 151 LGVKCNEFTFSSVLKACS 168


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/600 (32%), Positives = 337/600 (56%), Gaps = 38/600 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V + N+L+SM+ + G++  A   F  M+ +DV SWN ++ G+A  G F+EA +L H M L
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM-L 190

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + P++ T  +++  CA    +  G+ +H + IR     D+ + N+L+  Y K   +S
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSC 378
            A +LF+ + P  D +SWN+MISG F+        E+  +  + S      T+  +  +C
Sbjct: 251 NARMLFDKM-PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              ++   G+ +H + +K  F  +    N+L+ MY + G L  A ++  R+  + D   W
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKDVVSW 368

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG 495
             +I +   +    +A++T+K M + +   PD +TLV+V+SAC   G+L+L   G  LH 
Sbjct: 369 TAMIASLVSHKLPFKAVETYK-MMELEGILPDEITLVSVLSACACIGHLDL---GIRLHE 424

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +A+K+ +     V N+LI MY +C+ + +A  VF +    N+ +W  +I     N     
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFE 484

Query: 556 ALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           AL  FR ++   +PN ++++S+LSAC ++G L  GK+IH H    G   + F+ +A+LDM
Sbjct: 485 ALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDM 544

Query: 614 YSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           Y  C              K   AW+ +++ Y   G+   A+ELF +M    I P + + I
Sbjct: 545 YVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           SLL ACS SG+V EGL+Y+N M  +Y++ P  +H+ C+VD+LGR+G+L +AY+FI+++PI
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPI 664

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   +WGA+L+AC  H + ++G+  A+ +F+ + ++VGYYI L N+Y   G W    ++
Sbjct: 665 RPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKV 724



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/571 (29%), Positives = 286/571 (50%), Gaps = 41/571 (7%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M+ + G+L  +   F  M   D  SWN ++ G       ++ L  +  M W+ 
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + +  +  S +   A + +++ GK IHA  I+ G+E    V V N+LI+MY +CGDI  
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD--VDVGNALITMYVKCGDISN 251

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  +D +SWNA+I G+  NG   E  +L   M+ + SV+PD+ T+ T+ S C 
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMREL-SVDPDLITMTTVASACE 310

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
                R GR VHGY ++   G D+ M NSL+  YS    L +AE +F+ +    D+VSW 
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES-KDVVSWT 369

Query: 350 SMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +MI+ L    L   +  ++             TL+++L +C     L+ G  +H   +K 
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  ++ I  N+L+ MY  C  +  A  + + IS  +  S W  +I+    N    EA+  
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNRSFEALLF 488

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M  +++  P+SVTL++V+SAC  +     GK +H  AL++ +G D  + NA++ MY 
Sbjct: 489 FRQM--KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVS 574
           RC     A   F S    ++  WN +++ ++Q      A+ELF     LE  P+EI+ +S
Sbjct: 547 RCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFIS 605

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L AC++ G++  G +      +    +N +      ++  N K    ++ ++   G  G
Sbjct: 606 LLCACSKSGMVTEGLE------YFNIMKNKY------NLTPNLKH---YACVVDILGRAG 650

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           +  +A +   +M    IRP  +   +LL+AC
Sbjct: 651 QLDDAYDFIQDM---PIRPDAAIWGALLNAC 678



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 248/509 (48%), Gaps = 26/509 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T Y       ++  LF +   +D ++WNAMI+   EN   + GL  F
Sbjct: 228 GFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELF 287

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M E  +  D  T+  + SA   ++  + GR VH   +K+    D S+ N  + MY+  
Sbjct: 288 SMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL 347

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +E  FS M   D VSW  +++  + +  P K +  ++ M   G   D ++L S +
Sbjct: 348 GRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVL 407

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A AC+G L  G  +H + IK G     +V V+NSLI MYS+C  ++ A   F  ++ K+
Sbjct: 408 SACACIGHLDLGIRLHEIAIKTGL--VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW ++I G  +N +  EA  LL   Q+  S++P+  T+++++S CA    L  G+ +H
Sbjct: 466 VVSWTSLILGLRINNRSFEA--LLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIH 523

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+R  +G+D  + N+++D Y +      A   FN  +   D+ +WN +++G       
Sbjct: 524 AHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQA 581

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF +ML L       T +++L +C+      E LE+    +  + K   + N   
Sbjct: 582 KLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEY---FNIMKNKYNLTPNLKH 638

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
              ++ +    G L  A+  +Q +    D + W  ++ AC  + + +      K + ++ 
Sbjct: 639 YACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKD 698

Query: 466 NASPD-SVTLVNVISACGNLELAFEGKSL 493
           N S    + L N+ + CGN +   + +SL
Sbjct: 699 NKSVGYYILLCNLYAGCGNWDKVSKVRSL 727



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 237/491 (48%), Gaps = 20/491 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ +        +  +F +   +DV +WN ++    +  C    L+ +  M+   IR 
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T   ++     ++ + +G+ +H   I+ G  +D  + N  + MY KCGD++++   F
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N    + L  F  M       D +++++  +A   L    
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   +K   E    +S+ NSLI MYS  G +E AE  F  M  KDVVSW A+I  
Sbjct: 317 LGRGVHGYVVK--SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +    +A +    M+L   + PD  T+V+++S CA    L  G  +H  AI+  L  
Sbjct: 375 LVSHKLPFKAVETYKMMEL-EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQ 365
            +++ NSL+D YSK   +  A  +F  I+  N +VSW S+I GL      F+ +L+   Q
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKN-VVSWTSLILGLRINNRSFEALLFF-RQ 491

Query: 366 FSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
              S      TL+++L +C    +L  GK IH   L+ G   +    NA++ MY+ CG  
Sbjct: 492 MKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRK 551

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
           V A +  Q  S   D + WNI++    Q G  + A++ F  M + +   PD +T ++++ 
Sbjct: 552 VPALN--QFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE-IHPDEITFISLLC 608

Query: 480 ACGNLELAFEG 490
           AC    +  EG
Sbjct: 609 ACSKSGMVTEG 619



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 166/385 (43%), Gaps = 50/385 (12%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +P+ ++P++L F K++   +  L  +     V A                    +SH++ 
Sbjct: 21  VPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAA-------------------VSHSAI 61

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
               N+ +      G+ ++A+K  +SM + +    +    + ++  C       EG  ++
Sbjct: 62  DQTQNLELRELCLQGNLEQAMKRLESMLELR-IEVEEDAYIALLRLCEWRRAPDEGSRVY 120

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            L   S   L  R+ NAL++M+ R  ++  A  VF      ++ +WN ++  +++     
Sbjct: 121 ELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD 180

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL L+  +   E  PN  +  S+L  C  +  +  GK+IH HV   GF+ +  + +AL+
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY  C               +   +W++MIS Y  +G G E +ELF  M    + P   
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYE 712
           ++ ++ SAC    L+D   +     +  Y V+ E    +     ++ M    G+L+EA  
Sbjct: 301 TMTTVASACE---LLDN--ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 713 FIKNLPIQPKPGV-WGAMLSACSHH 736
               +  + K  V W AM+++   H
Sbjct: 356 VFSRM--ESKDVVSWTAMIASLVSH 378


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 234/787 (29%), Positives = 394/787 (50%), Gaps = 66/787 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-------GIRFDSTTLLIIVSALTQMN 87
           N  ++ WN++I A          LH F E ++        G+  D  T   ++ A T   
Sbjct: 89  NPSLILWNSLIRAYSR-------LHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGAL 141

Query: 88  CLKQGRVVHCLSIKAGMIADSSL-CNVF-----VNMYAKCGDLNSSECTFSGMHCADTVS 141
              +G  +H        IA   L C+VF     V+MY K G L+++   F  M   D  S
Sbjct: 142 DFHEGVAIH------QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVAS 195

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           WN ++SG   ++ P + L  F+ M    G + D+VS+ +   A + L ++   K IH   
Sbjct: 196 WNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYV 255

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           ++       +  V+NSLI MYS+CG+++ A + F  M  KD +SW  ++ G+  +G + E
Sbjct: 256 VR----RCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFE 311

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
              LL EM+  + ++ +  +VV  +    ++  L +G+ VH YA++  +  D+++   ++
Sbjct: 312 VLQLLDEMK-RKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIV 370

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSF 368
             Y+K   L KA+  F ++    DLV W++ +S L            F+EM +   +   
Sbjct: 371 SMYAKCGELKKAKEFFLSLEG-RDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDK 429

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           + L +++ +C    S   GK +HC+ +K    ++      L+ MY  C   + A +L  R
Sbjct: 430 TILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNR 489

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           + H  D   WN +I   T+ G  + A++ F  + Q     PDS T+V+++SAC  L+  +
Sbjct: 490 M-HYKDVVAWNTLINGFTKCGDPRLALEMFLRL-QLSGVQPDSGTMVSLLSACALLDDLY 547

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAF 547
            G   HG  +K+ +  +  V+ ALI MY +C  + +A  +F  + +  +  +WN MI+ +
Sbjct: 548 LGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGY 607

Query: 548 SQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
             N     A+  F  ++ E   PN ++ V+IL A + L +LR     H  +  +GF  ++
Sbjct: 608 LHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISST 667

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I ++L+DMY+                 K   +W++M+S Y  HG+G  A+ LF  M  +
Sbjct: 668 LIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQET 727

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            +     S IS+LSAC H+GL+ EG   + +M E++++ P  EH+ C+VD+LG +G   E
Sbjct: 728 HVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDE 787

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
               I  +P +P   VWGA+L AC  H + K+G+     L KLEP N  +YI LS++Y  
Sbjct: 788 VLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQ 847

Query: 770 LGRWKDA 776
            GRW DA
Sbjct: 848 CGRWIDA 854



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 291/597 (48%), Gaps = 23/597 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGI 69
           T L+  Y  + + +++  +F +   KDV +WNAMI+   ++      L  F  M +EEG+
Sbjct: 166 TGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGV 225

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             DS ++L +  A++++  +   + +H   ++  +    S  N  ++MY+KCG++  +  
Sbjct: 226 EPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVS--NSLIDMYSKCGEVKLAHQ 283

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D +SW T+M+G +H+    + L    EM     + + +S+ ++V A+    +
Sbjct: 284 IFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRD 343

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H   ++LG      + V   ++SMY++CG+++ A+  F  +  +D+V W+A +
Sbjct: 344 LEKGKEVHNYALQLGMTSD--IVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFL 401

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                 G   EA  +  EMQ    ++PD   + +L+S CA+    R G+ +H Y I+  +
Sbjct: 402 SALVQAGYPGEALSIFQEMQ-HEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADM 460

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLY 361
           G D+ +  +L+  Y++  S   A  LFN +    D+V+WN++I+G  K        EM  
Sbjct: 461 GSDISVATTLVSMYTRCKSFMYAMTLFNRMH-YKDVVAWNTLINGFTKCGDPRLALEMFL 519

Query: 362 LCS----QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                  Q    T++++L +C   + L  G   H   +K G  +      AL+ MY  CG
Sbjct: 520 RLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCG 579

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A +L     H  D   WN++I     NG   EAI TF  M + ++  P+ VT V +
Sbjct: 580 SLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQM-KLESVRPNLVTFVTI 638

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + A   L +  E  + H   ++      T + N+LI MY +   +  +   F    N   
Sbjct: 639 LPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGT 698

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            +WN M+S ++ +     AL LF  ++      + +S +S+LSAC   G+++ G+ I
Sbjct: 699 ISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNI 755



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 249/499 (49%), Gaps = 21/499 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S SL+  YS     + +  +F +   KD ++W  M+   V + C    L    EM  + 
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKH 323

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ +  +++  V A T+   L++G+ VH  +++ GM +D  +    V+MYAKCG+L  ++
Sbjct: 324 IKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAK 383

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D V W+  +S  +   YP + L  F+EM   G + D   LSS V+A A + 
Sbjct: 384 EFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEIS 443

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               GK++H   IK        +SV  +L+SMY++C     A   F  M  KDVV+WN +
Sbjct: 444 SSRLGKMMHCYVIKADMGSD--ISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTL 501

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREGRSVHGYAIR 306
           I+GF   G    A ++   +QL   V+PD  T+V+L+S CA  D L L  G   HG  I+
Sbjct: 502 INGFTKCGDPRLALEMFLRLQL-SGVQPDSGTMVSLLSACALLDDLYL--GICFHGNIIK 558

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
             +  ++ +  +L+D Y+K  SL  AE LF+    + D VSWN MI+G            
Sbjct: 559 NGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAIS 618

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F +M     + +  T + ILP+ +    L    + H   +++GF ++T+  N+L+ MY 
Sbjct: 619 TFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYA 678

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G L  +      +  N  T  WN ++     +G  + A+  F S+ Q+ +   DSV+ 
Sbjct: 679 KSGQLSYSEKCFHEME-NKGTISWNAMLSGYAMHGQGEVALALF-SLMQETHVPVDSVSY 736

Query: 475 VNVISACGNLELAFEGKSL 493
           ++V+SAC +  L  EG+++
Sbjct: 737 ISVLSACRHAGLIQEGRNI 755



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 233/497 (46%), Gaps = 19/497 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  +T +++ Y+     + +   F     +D+V W+A ++A V+       L  F
Sbjct: 358 GMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIF 417

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EG++ D T L  +VSA  +++  + G+++HC  IKA M +D S+    V+MY +C
Sbjct: 418 QEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRC 477

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                +   F+ MH  D V+WNT+++G      P   L  F  +  SG Q D+ ++ S +
Sbjct: 478 KSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLL 537

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
           +A A L +L  G   H   IK G E   +V V  +LI MY++CG +  AE  F      K
Sbjct: 538 SACALLDDLYLGICFHGNIIKNGIESEMHVKV--ALIDMYAKCGSLCTAENLFHLNKHVK 595

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWN +I G+  NG   EA    ++M+L  SV P++ T VT++   +   +LRE  + 
Sbjct: 596 DEVSWNVMIAGYLHNGCANEAISTFNQMKL-ESVRPNLVTFVTILPAVSYLSILREAMAF 654

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   IR       L+ NSL+D Y+KS  LS +E  F+ +      +SWN+M+SG      
Sbjct: 655 HACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMEN-KGTISWNAMLSGYAMHGQ 713

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF  M          + +++L +C     ++ G++I     +      ++   A
Sbjct: 714 GEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYA 773

Query: 409 LMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMTQQQN 466
            M   + C  L      L+ ++    D   W  ++ AC  + + +   I     +  +  
Sbjct: 774 CMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPR 833

Query: 467 ASPDSVTLVNVISACGN 483
            +   + L ++ + CG 
Sbjct: 834 NAVHYIVLSDIYAQCGR 850



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 259/538 (48%), Gaps = 50/538 (9%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +T   ++ WN++I  ++    F+EA      M  M  +EPD  T   ++  C  +L   E
Sbjct: 87  ITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYM-GLEPDKYTFTFVLKACTGALDFHE 145

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           G ++H     R L  D+ +   L+D Y K   L  A  +F+ + P  D+ SWN+MISGL 
Sbjct: 146 GVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKM-PGKDVASWNAMISGLS 204

Query: 357 K-----EMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
           +     E L +  +            ++L + P+ +  E ++  KSIH + ++       
Sbjct: 205 QSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR----RCV 260

Query: 404 IGV--NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            GV  N+L+ MY  CG++  A  +  ++    D S W  ++     +G + E ++    M
Sbjct: 261 FGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDIS-WATMMAGYVHHGCYFEVLQLLDEM 319

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            ++++   + +++VN + A        +GK +H  AL+  M  D  V   +++MY +C +
Sbjct: 320 -KRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGE 378

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           +K A   F S    +L  W+  +SA  Q      AL +F+ ++ E   P++  + S++SA
Sbjct: 379 LKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSA 438

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAW 623
           C ++   R GK +H +V       +  +++ L+ MY+ CKS                 AW
Sbjct: 439 CAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAW 498

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE---GLQYYNN 680
           +++I+ +   G    A+E+F  +  SG++P   +++SLLSAC+   L+D+   G+ ++ N
Sbjct: 499 NTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACA---LLDDLYLGICFHGN 555

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHG 737
           +++   +  E    V ++DM  + G L  A E + +L    K  V W  M++   H+G
Sbjct: 556 IIKN-GIESEMHVKVALIDMYAKCGSLCTA-ENLFHLNKHVKDEVSWNVMIAGYLHNG 611



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 33/294 (11%)

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ---NKAEVRALELFRHLEFE 566
           N L+ ++ R   ++  +    S  N +L  WN +I A+S+    +  +++ +   ++  E
Sbjct: 66  NPLLQIHARLI-VQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLE 124

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           P++ +   +L ACT       G  IH  +     + + FI + L+DMY            
Sbjct: 125 PDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKV 184

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGL 670
                 K  A+W++MIS         EA+E+F  M    G+ P   S+++L  A S    
Sbjct: 185 FDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLED 244

Query: 671 VDEGLQYYNNMLEE--YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           VD     +  ++    + V   +     ++DM  + G+++ A++    + ++     W  
Sbjct: 245 VDSCKSIHGYVVRRCVFGVVSNS-----LIDMYSKCGEVKLAHQIFDQMWVKDDIS-WAT 298

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGY-YISLSNMYVALGRWKDAVEIGK 781
           M++   HHG      +V +LL +++ +++    IS+ N  +A    +D +E GK
Sbjct: 299 MMAGYVHHG---CYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRD-LEKGK 348


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 217/702 (30%), Positives = 366/702 (52%), Gaps = 67/702 (9%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N F+    K GDL  +   F GM   D VSWN ++S  +   + EK L  +  M   G  
Sbjct: 62  NAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFL 121

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAA 230
               +L+S ++A + + +   G   H + +K G + + +V   N+L+SMY++CG  ++  
Sbjct: 122 PSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVG--NALLSMYAKCGFMVDYG 179

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM--RSVEPDIATVVTLISLC 288
            R F  ++  + VS+  +I G A   K  EA   +H  +LM  + V+ D   +  ++S+ 
Sbjct: 180 VRVFESLSEPNEVSFTTVISGLARENKVLEA---VHMFRLMCEKGVQVDCVCLSNILSIS 236

Query: 289 A-----DSL------LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
                 DSL      +L  G+ +H  A+RR    +L + NSL++ Y+K+  ++ AEL+F 
Sbjct: 237 VPREGCDSLSEIYGNVL--GKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFT 294

Query: 338 AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
            +  +N +VSWN MI+G  +E                     S +S+E+ K +       
Sbjct: 295 EMPEVN-VVSWNIMIAGFGQEY-------------------RSDKSIEYLKRMR----DS 330

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF  N +   +++      GD+     +   I   S  S WN ++   +   H++EAI  
Sbjct: 331 GFEPNEVTCISILGACFRSGDVETGRRIFNTIPQPS-VSAWNAMLSGYSNYEHYEEAINN 389

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M Q QN  PD  TL  ++S+C  L     GK +HG+A+++    D+ + + LI +Y 
Sbjct: 390 FRQM-QFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYS 448

Query: 518 RCRDIKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISI 572
            C  ++    +F+ C N  ++  WN MIS   +N  + +AL LFR +       PNE + 
Sbjct: 449 ECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTY 508

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
             +L +C++L  L HG+Q HG V   G+  +SF+ +A+ DMY  C               
Sbjct: 509 AIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSR 568

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K+   W+ MI  Y ++G+G EA++L+ EM ++G +P   + +S+L+ACSHSGLVD GL+ 
Sbjct: 569 KNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEI 628

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            ++M  ++ + PE +H++CIVD LGR+G+L++A    +  P +    +W  +LS+C  +G
Sbjct: 629 LSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCRVYG 688

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           D  + ++VAE L  L+P+N   Y+ LSN Y ++ +W DA  +
Sbjct: 689 DVSLARRVAEKLMHLDPQNSAAYVLLSNTYSSVRQWDDAAAL 730



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 275/605 (45%), Gaps = 64/605 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           + LT    V   E +  +F     +DVV+WN MI+  V        L  +G MV +G   
Sbjct: 63  AFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLP 122

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSECT 130
              TL  ++SA +++     G   H +++K G+  +  + N  ++MYAKCG + +     
Sbjct: 123 SRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRV 182

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS----AVAASAC 186
           F  +   + VS+ T++SG    N   + +  FR M   G Q D V LS+    +V    C
Sbjct: 183 FESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGC 242

Query: 187 --LGEL---SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             L E+     GK IH+L ++ G+    +++  NSL+ +Y++  D+  AE  F  M   +
Sbjct: 243 DSLSEIYGNVLGKQIHSLALRRGFVGELHLN--NSLLEIYAKNKDMNGAELIFTEMPEVN 300

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I GF    + +++ + L  M+     EP+  T ++++  C  S  +  GR + 
Sbjct: 301 VVSWNIMIAGFGQEYRSDKSIEYLKRMR-DSGFEPNEVTCISILGACFRSGDVETGRRI- 358

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
                                             FN I P   + +WN+M+SG       
Sbjct: 359 ----------------------------------FNTI-PQPSVSAWNAMLSGYSNYEHY 383

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F++M +   +   +TL  IL SC     LE GK IH   ++   S ++  V+ L
Sbjct: 384 EEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGL 443

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  C  +     +     +  D +CWN +I    +N    +A+  F+ M Q     P
Sbjct: 444 IAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLP 503

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  T   V+ +C  L     G+  HG  +KS    D+ V+ A+  MY +C +I+SA   F
Sbjct: 504 NETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFF 563

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           ++    N   WN MI  ++ N     A++L+R +     +P+ I+ VS+L+AC+  G++ 
Sbjct: 564 DTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVD 623

Query: 587 HGKQI 591
            G +I
Sbjct: 624 TGLEI 628



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 258/596 (43%), Gaps = 78/596 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYF-ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G   ++    +LL+ Y+   +  +  + +F      + V++  +I+       V+  +H 
Sbjct: 154 GLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHM 213

Query: 61  FGEMVEEGIRFDSTTLLIIVS---------ALTQMNCLKQGRVVHCLSIKAGMIADSSLC 111
           F  M E+G++ D   L  I+S         +L+++     G+ +H L+++ G + +  L 
Sbjct: 214 FRLMCEKGVQVDCVCLSNILSISVPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLN 273

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  + +YAK  D+N +E  F+ M   + VSWN +++G       +K + Y + M  SG +
Sbjct: 274 NSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFE 333

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S + A    G++  G+                                     
Sbjct: 334 PNEVTCISILGACFRSGDVETGR------------------------------------- 356

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  +    V +WNA++ G++    +EEA +   +MQ  ++++PD  T+  ++S CA  
Sbjct: 357 RIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQF-QNLKPDRTTLSVILSSCARL 415

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L  G+ +HG AIR     D  +++ L+  YS+   +   E +F+      D+  WNSM
Sbjct: 416 RFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDDCINELDIACWNSM 475

Query: 352 ISGLFKEMLYLCSQFSF-------------STLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           ISGL +  L   +   F             +T   +L SC+   SL  G+  H   +K G
Sbjct: 476 ISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSG 535

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           + +++    A+  MY  CG++ +A      +S   +T  WN +I     NG   EA+  +
Sbjct: 536 YVSDSFVETAVTDMYCKCGEIESARQFFDTVSRK-NTVIWNEMIHGYAHNGRGDEAVDLY 594

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL------ 512
           + M       PD +T V+V++AC     +  G    GL + S M  D  ++  L      
Sbjct: 595 REMI-SAGEKPDGITFVSVLTAC-----SHSGLVDTGLEILSSMQRDHGIEPELDHYICI 648

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA---FSQNKAEVRALELFRHLE 564
           +   GR   ++ A T+ E+  Y  +   W  ++S+   +       R  E   HL+
Sbjct: 649 VDCLGRAGRLEDAETLAEATPYKSSSVLWEILLSSCRVYGDVSLARRVAEKLMHLD 704



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 175/429 (40%), Gaps = 69/429 (16%)

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           + G +++T   N L+ +YI  GD   A  L   +S   D   WN  +    + G  +EA 
Sbjct: 20  RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLR-DVYSWNAFLTFRCKVGDLEEAC 78

Query: 456 KTFKSMTQQQNAS------------------------------PDSVTLVNVISACGNLE 485
           + F  M ++   S                              P   TL +V+SAC  ++
Sbjct: 79  EVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQ 138

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR-DIKSASTVFESCYNCNLCTWNCMI 544
               G   HG+A+K+ +  +  V NAL++MY +C   +     VFES    N  ++  +I
Sbjct: 139 DGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEPNEVSFTTVI 198

Query: 545 SAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH-------------GKQI 591
           S  ++    + A+ +FR +  +  ++  V  LS    + V R              GKQI
Sbjct: 199 SGLARENKVLEAVHMFRLMCEKGVQVDCVC-LSNILSISVPREGCDSLSEIYGNVLGKQI 257

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKS-NAA--------------WSSMISAYGYHGKG 636
           H      GF     ++++LL++Y+  K  N A              W+ MI+ +G   + 
Sbjct: 258 HSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQEYRS 317

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            ++IE    M +SG  P + + IS+L AC  SG V+ G + +N + +     P       
Sbjct: 318 DKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRIFNTIPQ-----PSVSAWNA 372

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           ++         +EA    + +  Q   P       +LS+C+     + GKQ+  +  + E
Sbjct: 373 MLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTE 432

Query: 754 PENVGYYIS 762
                + +S
Sbjct: 433 TSEDSHIVS 441


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/600 (32%), Positives = 337/600 (56%), Gaps = 38/600 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V + N+L+SM+ + G++  A   F  M+ +DV SWN ++ G+A  G F+EA +L H M L
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM-L 190

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + P++ T  +++  CA    +  G+ +H + IR     D+ + N+L+  Y K   +S
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS 250

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSC 378
            A +LF+ + P  D +SWN+MISG F+        E+  +  + S      T+  +  +C
Sbjct: 251 NARMLFDKM-PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              ++   G+ +H + +K  F  +    N+L+ MY + G L  A ++  R+  + D   W
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKDVVSW 368

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG 495
             +I +   +    +A++T+K M + +   PD +TLV+V+SAC   G+L+L   G  LH 
Sbjct: 369 TAMIASLVSHKLPFKAVETYK-MMELEGILPDEITLVSVLSACACIGHLDL---GIRLHE 424

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +A+K+ +     V N+LI MY +C+ + +A  VF +    N+ +W  +I     N     
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFE 484

Query: 556 ALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           AL  FR ++   +PN ++++S+LSAC ++G L  GK+IH H    G   + F+ +A+LDM
Sbjct: 485 ALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDM 544

Query: 614 YSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           Y  C              K   AW+ +++ Y   G+   A+ELF +M    I P + + I
Sbjct: 545 YVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFI 604

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           SLL ACS SG+V EGL+Y+N M  +Y++ P  +H+ C+VD+LGR+G+L +AY+FI+++PI
Sbjct: 605 SLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPI 664

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   +WGA+L+AC  H + ++G+  A+ +F+ + ++VGYYI L N+Y   G W    ++
Sbjct: 665 RPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKV 724



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/571 (29%), Positives = 286/571 (50%), Gaps = 41/571 (7%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M+ + G+L  +   F  M   D  SWN ++ G       ++ L  +  M W+ 
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + +  +  S +   A + +++ GK IHA  I+ G+E    V V N+LI+MY +CGDI  
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD--VDVGNALITMYVKCGDISN 251

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  +D +SWNA+I G+  NG   E  +L   M+ + SV+PD+ T+ T+ S C 
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMREL-SVDPDLITMTTVASACE 310

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
                R GR VHGY ++   G D+ M NSL+  YS    L +AE +F+ +    D+VSW 
Sbjct: 311 LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES-KDVVSWT 369

Query: 350 SMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +MI+ L    L   +  ++             TL+++L +C     L+ G  +H   +K 
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  ++ I  N+L+ MY  C  +  A  + + IS  +  S W  +I+    N    EA+  
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNRSFEALLF 488

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M  +++  P+SVTL++V+SAC  +     GK +H  AL++ +G D  + NA++ MY 
Sbjct: 489 FRQM--KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVS 574
           RC     A   F S    ++  WN +++ ++Q      A+ELF     LE  P+EI+ +S
Sbjct: 547 RCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFIS 605

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L AC++ G++  G +      +    +N +      ++  N K    ++ ++   G  G
Sbjct: 606 LLCACSKSGMVTEGLE------YFNIMKNKY------NLTPNLKH---YACVVDILGRAG 650

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           +  +A +   +M    IRP  +   +LL+AC
Sbjct: 651 QLDDAYDFIQDM---PIRPDAAIWGALLNAC 678



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 248/509 (48%), Gaps = 26/509 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T Y       ++  LF +   +D ++WNAMI+   EN   + GL  F
Sbjct: 228 GFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELF 287

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M E  +  D  T+  + SA   ++  + GR VH   +K+    D S+ N  + MY+  
Sbjct: 288 SMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL 347

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +E  FS M   D VSW  +++  + +  P K +  ++ M   G   D ++L S +
Sbjct: 348 GRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVL 407

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A AC+G L  G  +H + IK G     +V V+NSLI MYS+C  ++ A   F  ++ K+
Sbjct: 408 SACACIGHLDLGIRLHEIAIKTGL--VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKN 465

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW ++I G  +N +  EA  LL   Q+  S++P+  T+++++S CA    L  G+ +H
Sbjct: 466 VVSWTSLILGLRINNRSFEA--LLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIH 523

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+R  +G+D  + N+++D Y +      A   FN  +   D+ +WN +++G       
Sbjct: 524 AHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFN--SQKKDVTAWNILLTGYAQQGQA 581

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF +ML L       T +++L +C+      E LE+    +  + K   + N   
Sbjct: 582 KLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEY---FNIMKNKYNLTPNLKH 638

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
              ++ +    G L  A+  +Q +    D + W  ++ AC  + + +      K + ++ 
Sbjct: 639 YACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKD 698

Query: 466 NASPD-SVTLVNVISACGNLELAFEGKSL 493
           N S    + L N+ + CGN +   + +SL
Sbjct: 699 NKSVGYYILLCNLYAGCGNWDKVSKVRSL 727



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 237/491 (48%), Gaps = 20/491 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ +        +  +F +   +DV +WN ++    +  C    L+ +  M+   IR 
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T   ++     ++ + +G+ +H   I+ G  +D  + N  + MY KCGD++++   F
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWN ++SG   N    + L  F  M       D +++++  +A   L    
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   +K   E    +S+ NSLI MYS  G +E AE  F  M  KDVVSW A+I  
Sbjct: 317 LGRGVHGYVVK--SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +    +A +    M+L   + PD  T+V+++S CA    L  G  +H  AI+  L  
Sbjct: 375 LVSHKLPFKAVETYKMMEL-EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQ 365
            +++ NSL+D YSK   +  A  +F  I+  N +VSW S+I GL      F+ +L+   Q
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKN-VVSWTSLILGLRINNRSFEALLFF-RQ 491

Query: 366 FSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
              S      TL+++L +C    +L  GK IH   L+ G   +    NA++ MY+ CG  
Sbjct: 492 MKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRK 551

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
           V A +  Q  S   D + WNI++    Q G  + A++ F  M + +   PD +T ++++ 
Sbjct: 552 VPALN--QFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE-IHPDEITFISLLC 608

Query: 480 ACGNLELAFEG 490
           AC    +  EG
Sbjct: 609 ACSKSGMVTEG 619



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 166/385 (43%), Gaps = 50/385 (12%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +P+ ++P++L F K++   +  L  +     V A                    +SH++ 
Sbjct: 21  VPNNHNPKTLSFSKNLQTHKHTLRKTQEISVVGAA-------------------VSHSAI 61

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
               N+ +      G+ ++A+K  +SM + +    +    + ++  C       EG  ++
Sbjct: 62  DQTQNLELRELCLQGNLEQAMKRLESMLELR-IEVEEDAYIALLRLCEWRRAPDEGSRVY 120

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            L   S   L  R+ NAL++M+ R  ++  A  VF      ++ +WN ++  +++     
Sbjct: 121 ELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD 180

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL L+  +   E  PN  +  S+L  C  +  +  GK+IH HV   GF+ +  + +AL+
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY  C               +   +W++MIS Y  +G G E +ELF  M    + P   
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYE 712
           ++ ++ SAC    L+D   +     +  Y V+ E    +     ++ M    G+L+EA  
Sbjct: 301 TMTTVASACE---LLDN--ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET 355

Query: 713 FIKNLPIQPKPGV-WGAMLSACSHH 736
               +  + K  V W AM+++   H
Sbjct: 356 VFSRM--ESKDVVSWTAMIASLVSH 378


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 216/720 (30%), Positives = 367/720 (50%), Gaps = 42/720 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  ++  G+     + N+ +++Y+K G +  +   F  +   D VSW  ++SG   N  
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +R+M  +G       LSS +++       + G++IHA G K G+    +V   
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG-- 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++I++Y +CG    AER F  M  +D V++N +I G A  G  E A ++  EMQ    +
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF-SGL 240

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  T+ +L++ CA    L++G  +H Y  +  +  D +M  SL+D Y K   +  A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300

Query: 335 LFNAIAPMNDLVSWNSM------ISGLFKEMLYLC---------SQFSFSTLLAILPSCN 379
           +FN+ +   ++V WN M      I+ L K     C         +QF++     IL +C 
Sbjct: 301 IFNS-SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP---CILRTCT 356

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               ++ G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W 
Sbjct: 357 CTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWT 415

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    Q+   ++A+  FK M Q+    PD++ L + IS C  +    +G  +H     
Sbjct: 416 SMIAGYVQHECCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    D  + NAL+ +Y RC  I+ A + FE     +  T N ++S F+Q+     AL++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  ++    + N  + VS LSA   L  ++ GKQIH  V   G    + + +AL+ +Y  
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+++I++   HG+G EA++LF +M   GI+P   + I +
Sbjct: 595 CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGV 654

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L+ACSH GLV+EGL Y+ +M +EY +RP  +H+ C++D+ GR+G+L  A +FI+ +PI  
Sbjct: 655 LAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAA 714

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y    +W +  ++ K
Sbjct: 715 DAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRK 774



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 171/603 (28%), Positives = 286/603 (47%), Gaps = 21/603 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +      L+  YS       +  +F E   +D V+W AM++   +N      L  
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M   G+      L  ++S+ T+     QGR++H    K G  ++  + N  + +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLR 190

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG    +E  F  M   DTV++NT++SG     + E  L  F EM +SG   D V++SS 
Sbjct: 191 CGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A LG+L  G  +H+   K G   S Y+ +  SL+ +Y +CGD+E A   F      
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGI-SSDYI-MEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN ++  F       ++F+L  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAA-GIRPNQFTYPCILRTCTCTREIDLGEQI 367

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +++     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQHEC 426

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  FKEM           L + +  C    ++  G  IH      G+S +    NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+++Y  CG +  AFS  + +    D    N ++    Q+G  +EA+K F  M  Q    
Sbjct: 487 LVNLYARCGRIREAFSSFEEMELK-DGITGNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            +  T V+ +SA  NL    +GK +H   +K+    +T V NALI++YG+C   + A   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      N  +WN +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G++
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 586 RHG 588
             G
Sbjct: 665 EEG 667



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 185/380 (48%), Gaps = 12/380 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS   + E +  +      KDVV+W +MI   V++ C    L  F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAF 434

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + GI  D+  L   +S    +N ++QG  +H     +G   D S+ N  VN+YA+C
Sbjct: 435 KEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARC 494

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +  +F  M   D ++ N ++SG   +   E+ L  F  M  SG + +  +  SA+
Sbjct: 495 GRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA L E+  GK IHA  IK G+  S    V N+LIS+Y +CG  E A+  F  M+ ++
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGH--SFETEVGNALISLYGKCGSFEDAKMEFSEMSERN 612

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II   + +G+  EA DL  +M+    ++P+  T + +++ C+   L+ EG S  
Sbjct: 613 EVSWNTIITSCSQHGRGLEALDLFDQMK-KEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671

Query: 302 G-----YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y IR    +       ++D + ++  L +A+     +    D + W +++S   
Sbjct: 672 KSMSDEYGIRPRPDH----YACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727

Query: 357 KEMLYLCSQFSFSTLLAILP 376
                   +F+   LL + P
Sbjct: 728 VHKNIEVGEFAAKHLLELEP 747


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 230/742 (30%), Positives = 370/742 (49%), Gaps = 54/742 (7%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           L+ ++ A      L QGR +H   +  G+  +  L N  + +Y KC  L   E  FS + 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             D  SW TI++    +   ++ +  F  M   G + D V+  + + A A LG+LS G+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHA  ++ G E    ++  N L+ +Y  CG + +A   F  M  +D+VSWNA I   A +
Sbjct: 150 IHAWIVESGLEGKSVLA--NLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQS 206

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  + A +L   MQL   V P   T+V  +S+CA    +R+ R++H       L   L++
Sbjct: 207 GDLDMALELFQRMQL-EGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVV 262

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
             +L   Y++   L +A+ +F+  A   D+VSWN+M+              LF  ML+  
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG 321

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              S  TL+     C+S   L FG+ IH   L+ G   + +  NAL+ MY  CG    A 
Sbjct: 322 IPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG- 482
            L + I  N+ +  WN +I   +Q G  + A++ F+ M Q +  +P   T +N++ A   
Sbjct: 379 HLFEGIPGNAVS--WNTMIAGSSQKGQMKRALELFQRM-QLEGMAPVRATYLNLLEAVAS 435

Query: 483 NLELAF---EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY---NCN 536
           N E A    EG+ LH   +      +  +  A++ MY  C  I  A+  F+        +
Sbjct: 436 NPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           + +WN +IS+ SQ+    RAL  FR ++     PN+I+ V++L AC     L  G  +H 
Sbjct: 496 VVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHD 555

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAA----------------WSSMISAYGYHGKGW 637
           H+ H G + N F+++AL  MY  C S  +                +++MI+AY  +G   
Sbjct: 556 HLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAG 615

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EA++LF  M   G RP + S +S+LSACSH GL DEG + + +M + Y + P  +H+ C 
Sbjct: 616 EALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACA 675

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G L +A E I+ + ++P   VW  +L AC  + D   G+    ++ +L+P + 
Sbjct: 676 VDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDE 735

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
             Y+ LSN+    G+W +A E+
Sbjct: 736 SAYVVLSNILAGAGKWDEAAEV 757



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 205/699 (29%), Positives = 339/699 (48%), Gaps = 55/699 (7%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D  +W  +ITA  E+      +  F  M +EG+R D+ T L ++ A  ++  L QGR +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +++G+   S L N+ +++Y  CG + S+   F  M   D VSWN  ++    +   
Sbjct: 151 HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDL 209

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           +  L  F+ M   G +   ++L   +  S C  ++   + IH++  + G E +  VS   
Sbjct: 210 DMALELFQRMQLEGVRPARITL--VITLSVC-AKIRQARAIHSIVRESGLEQTLVVS--T 264

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L S Y++ G ++ A+  F     +DVVSWNA++  +A +G   EA  L   M L   + 
Sbjct: 265 ALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM-LHEGIP 323

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   T+V   + C+    LR GR +H  A+ + L  D+++ N+L+D Y++  S  +A  L
Sbjct: 324 PSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS-PE 382
           F  I P N  VSWN+MI+G            LF+ M         +T L +L +  S PE
Sbjct: 381 FEGI-PGN-AVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 383 ---SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR--ISHNSDTSC 437
              ++  G+ +H   +  G+++      A++ MY +CG +  A +  QR  +    D   
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I + +Q+GH + A+  F+ M      +P+ +T V V+ AC       EG  +H   
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHL 557

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTWNCMISAFSQNKAEVRA 556
             S M  +  V  AL +MYGRC  ++SA  +FE      ++  +N MI+A+SQN     A
Sbjct: 558 RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L+LF  ++ E   P+E S VS+LSAC+           HG +   G++    I  ++   
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACS-----------HGGLADEGWE----IFRSMRQS 662

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           Y    S   ++  +   G  G   +A EL   M    ++PT     +LL AC     VD 
Sbjct: 663 YGIAPSEDHYACAVDVLGRAGWLADAEELIRCM---DVKPTVLVWKTLLGACRKYRDVDR 719

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           G +  N+M+ E D   E+  +V + ++L  +GK  EA E
Sbjct: 720 G-RLANSMVRELDPGDESA-YVVLSNILAGAGKWDEAAE 756



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 235/490 (47%), Gaps = 41/490 (8%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           +S  L +E   +D+V+WNA I A  ++  + M L  F  M  EG+R    TL+I +S   
Sbjct: 180 ASAMLLFERMERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA 239

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           +   ++Q R +H +  ++G+     +     + YA+ G L+ ++  F      D VSWN 
Sbjct: 240 K---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNA 296

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++     + +  +  L F  M   G     V+L   V AS     L +G++IHA  ++ G
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIHACALEKG 353

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            +    + + N+L+ MY++CG  E A   F G+   + VSWN +I G +  G+ + A +L
Sbjct: 354 LDRD--IVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALEL 410

Query: 265 LHEMQLMRSVEPDIATVVTLISLCA----DSLLLREGRSVH------GYAIRRLLGYDLL 314
              MQL   + P  AT + L+   A    ++  + EGR +H      GYA    +G  ++
Sbjct: 411 FQRMQL-EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVV 469

Query: 315 MMNSLMDFYSKSNSLSKAELLFN--AIAPMNDLVSWNSMIS------------GLFKEML 360
            M      Y+   ++ +A   F   A+   +D+VSWN++IS            G F+ M 
Sbjct: 470 KM------YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 +  T +A+L +C    +L  G  +H      G  +N     AL  MY  CG L 
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLE 583

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +A  + ++++   D   +N +I A +QNG   EA+K F  M QQ+ + PD  + V+V+SA
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRM-QQEGSRPDEQSFVSVLSA 642

Query: 481 CGNLELAFEG 490
           C +  LA EG
Sbjct: 643 CSHGGLADEG 652



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 228/495 (46%), Gaps = 44/495 (8%)

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
           A +V L+    D  LL +GR +H   +   LG +  + N L+  Y K  SL   E +F+ 
Sbjct: 30  AHLVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEEVFSR 87

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           +  + D  SW ++I+             +F  M     +    T LA+L +C     L  
Sbjct: 88  L-EVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G+SIH W ++ G    ++  N L+H+Y +CG + +A  L +R+    D   WN  I A  
Sbjct: 147 GRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANA 204

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           Q+G    A++ F+ M Q +   P  +TLV  +S C  +  A   +++H +  +S +    
Sbjct: 205 QSGDLDMALELFQRM-QLEGVRPARITLVITLSVCAKIRQA---RAIHSIVRESGLEQTL 260

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            V  AL + Y R   +  A  VF+     ++ +WN M+ A++Q+     A  LF  +  E
Sbjct: 261 VVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS------- 619
               S V++++A T    LR G+ IH      G   +  + +ALLDMY+ C S       
Sbjct: 321 GIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 620 ------NA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS----HS 668
                 NA +W++MI+     G+   A+ELF  M   G+ P +++ ++LL A +     +
Sbjct: 381 FEGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440

Query: 669 GLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-- 725
             + EG + ++ ++   Y   P       +V M    G + EA    +   ++ +  V  
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAI--GTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 726 WGAMLSACSHHGDTK 740
           W A++S+ S HG  K
Sbjct: 499 WNAIISSLSQHGHGK 513



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 42/540 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ST+L +AY+ + + + +  +F     +DVV+WNAM+ A  ++  +      F
Sbjct: 255 GLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EGI     TL   V+A T  + L+ GR++H  +++ G+  D  L N  ++MY +C
Sbjct: 315 ARMLHEGIPPSKVTL---VNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRC 371

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLS 178
           G    +   F G+   + VSWNT+++G       ++ L  F+ M   G +  +A  ++L 
Sbjct: 372 GSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLL 430

Query: 179 SAVAASACLGE-LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            AVA++      ++ G+ +H+  +  GY   P  ++  +++ MY+ CG I+ A  +F   
Sbjct: 431 EAVASNPEEARAMAEGRKLHSRIVSCGYASEP--AIGTAVVKMYASCGAIDEAAASFQRG 488

Query: 238 TCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +   DVVSWNAII   + +G  + A      M L   V P+  T V ++  CA +  L
Sbjct: 489 AMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDL-HGVAPNQITCVAVLDACAGAAAL 547

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            EG  VH +     +  ++ +  +L   Y +  SL  A  +F  +A   D+V +N+MI+ 
Sbjct: 548 TEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKSIHCWQLKLG 398
                       LF  M    S+    + +++L +C+    + E  E  +S+   +   G
Sbjct: 608 YSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSM---RQSYG 664

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
            + +       + +    G L  A  L++ +        W  ++ AC +        +  
Sbjct: 665 IAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRG-RLA 723

Query: 459 KSMTQQQNASPDS--VTLVNVISACGNLELA------FEGKSLHGLALKSLMGLDTRVQN 510
            SM ++ +   +S  V L N+++  G  + A       E + L   A KS + + +RV  
Sbjct: 724 NSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHE 783


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 240/797 (30%), Positives = 382/797 (47%), Gaps = 75/797 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+  ++   + ++F      D V+W +MI   ++       +  F EM + G   
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D    + ++                                   N Y   G L+++   F
Sbjct: 260 DQVAFVTVI-----------------------------------NAYVDLGRLDNASDLF 284

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           S M   + V+WN ++SG     Y  + + +F+ M  +G ++   +L S ++A A L  L 
Sbjct: 285 SRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G ++HA  +K G   + YV   +SL+SMY++CG +EAA++ F  +  ++VV WNA++ G
Sbjct: 345 FGLLVHAEALKQGLHSNVYVG--SSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGG 402

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG   E  +L   M+      PD  T  +++S CA    L  G  +H   I+     
Sbjct: 403 YVQNGYANEVMELFFNMKSC-GFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFAS 461

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +L + N+L+D Y+KS +L  A   F  I    D VSWN +I G            LF+ M
Sbjct: 462 NLFVGNALVDMYAKSGALEDARQQFELIRN-RDNVSWNVIIVGYVQEEDEVEAFHLFRRM 520

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
             L       +L +IL +C S   LE GK +HC  +K G        ++L+ MY  CG +
Sbjct: 521 NLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAI 580

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +A  +L  +   S  S  N +I    Q  + ++A+  F+ M  +   S + +T  +++ 
Sbjct: 581 DSAHKILACMPERSVVSM-NALIAGYAQI-NLEQAVNLFRDMLVEGINSTE-ITFASLLD 637

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQN-ALITMYGRCRDIKSASTVFESCYNC-NL 537
           AC   +    G+ +H L LK  + LD      +L+ MY        AS +F    N  + 
Sbjct: 638 ACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSA 697

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
             W  MIS  SQN   V AL+L++ +      P++ + VS L AC  +  ++ G + H  
Sbjct: 698 VVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSL 757

Query: 595 VFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWE 638
           +FH GF  +   SSAL+DMY+ C                K   +W+SMI  +  +G   +
Sbjct: 758 IFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAED 817

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+ +F EM  S + P   + + +L+ACSHSG V EG   ++ M+  Y ++P  +H  C+V
Sbjct: 818 ALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMV 877

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR G L+EA EFI  L  +P   VW  ML AC  HGD   G+Q AE L +LEP+N  
Sbjct: 878 DLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSS 937

Query: 759 YYISLSNMYVALGRWKD 775
            Y+ LSN+Y A G W +
Sbjct: 938 PYVLLSNIYAASGNWDE 954



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 195/758 (25%), Positives = 354/758 (46%), Gaps = 90/758 (11%)

Query: 18  SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL 77
           ++V Y E +   F +  +KD++ WN++++   +     + + +FG +   G+  +  T  
Sbjct: 108 ADVDYAERA---FKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFA 164

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           I++S+  ++  +K GR VHC  +K G  + S      + MYAKC  L  +   F G    
Sbjct: 165 IVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVEL 224

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D VSW +++ G +    PE+ +  F+EM   G++ D V+                     
Sbjct: 225 DKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVA--------------------- 263

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
                       +V+V N+    Y   G ++ A   F  M  ++VV+WN +I G A  G 
Sbjct: 264 ------------FVTVINA----YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGY 307

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
             EA +    M+    ++   +T+ +++S  A    L  G  VH  A+++ L  ++ + +
Sbjct: 308 GVEAIEFFQNMR-KAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGS 366

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YL 362
           SL+  Y+K   +  A+ +F+ +   N +V WN+M+ G            LF  M    + 
Sbjct: 367 SLVSMYAKCGKMEAAKKVFDTLNEQN-VVLWNAMLGGYVQNGYANEVMELFFNMKSCGFY 425

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
              F++S+   IL +C   + L+ G  +H   +K  F++N    NAL+ MY   G L  A
Sbjct: 426 PDDFTYSS---ILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDA 482

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
               + I  N D   WN++IV   Q     EA   F+ M       PD V+L +++SAC 
Sbjct: 483 RQQFELI-RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMN-LLGILPDEVSLASILSACA 540

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           ++    +GK +H L++K+  G +T++   ++LI MY +C  I SA  +       ++ + 
Sbjct: 541 SVRGLEQGKQVHCLSVKT--GQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSM 598

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I+ ++Q   E +A+ LFR +  E     EI+  S+L AC +   L  G+QIH  +  
Sbjct: 599 NALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILK 657

Query: 598 LGFQ-ENSFISSALLDMY----------------SNCKSNAAWSSMISAYGYHGKGWEAI 640
           +G Q ++ F+  +LL MY                SN KS   W++MIS    +     A+
Sbjct: 658 MGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVAL 717

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVD 699
           +L+ EM +  + P +++ +S L AC+    + +G + ++ +    +D    T     +VD
Sbjct: 718 QLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSS--ALVD 775

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           M  + G ++ + +  K +  +     W +M+   + +G
Sbjct: 776 MYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNG 813



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 183/674 (27%), Positives = 309/674 (45%), Gaps = 72/674 (10%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           +++H  S+K G  +   L NV V++YAKC D++ +E  F  +   D ++WN+I+S     
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
            +P   + YF  +  SG   +  + +  +++ A L  +  G+ +H   +K+G+E   Y  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              +LI MY++C  +  A   F G    D VSW ++I G+   G  EEA  +  EM+ + 
Sbjct: 199 --GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVG 256

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
             EPD    VT+I               + Y        DL  +++  D +S+       
Sbjct: 257 Q-EPDQVAFVTVI---------------NAYV-------DLGRLDNASDLFSR------- 286

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
                   P  ++V+WN MISG             F+ M     + + STL ++L +  S
Sbjct: 287 -------MPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIAS 339

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +L+FG  +H   LK G  +N    ++L+ MY  CG + AA  +   ++   +   WN 
Sbjct: 340 LAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ-NVVLWNA 398

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           ++    QNG+  E ++ F +M +     PD  T  +++SAC  L+    G  LH + +K+
Sbjct: 399 MLGGYVQNGYANEVMELFFNM-KSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN 457

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               +  V NAL+ MY +   ++ A   FE   N +  +WN +I  + Q + EV A  LF
Sbjct: 458 KFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLF 517

Query: 561 RH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           R    L   P+E+S+ SILSAC  +  L  GKQ+H      G +   +  S+L+DMY+ C
Sbjct: 518 RRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKC 577

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +S  + +++I+ Y       +A+ LF +M   GI  T+ +  SLL
Sbjct: 578 GAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASLL 636

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            AC     ++ G Q ++ +L+      +    V ++ M   S +  +A            
Sbjct: 637 DACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKS 696

Query: 723 PGVWGAMLSACSHH 736
             VW AM+S  S +
Sbjct: 697 AVVWTAMISGLSQN 710



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 166/594 (27%), Positives = 279/594 (46%), Gaps = 23/594 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  +++   +SL++ Y+     E++  +F     ++VV WNAM+   V+N      +  
Sbjct: 356 QGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMEL 415

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M   G   D  T   I+SA   +  L  G  +H + IK    ++  + N  V+MYAK
Sbjct: 416 FFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAK 475

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F  +   D VSWN I+ G +      +    FR M   G   D VSL+S 
Sbjct: 476 SGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASI 535

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A +  L  GK +H L +K G E   Y    +SLI MY++CG I++A +    M  +
Sbjct: 536 LSACASVRGLEQGKQVHCLSVKTGQETKLYSG--SSLIDMYAKCGAIDSAHKILACMPER 593

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VVS NA+I G+A     E+A +L  +M L+  +     T  +L+  C +   L  GR +
Sbjct: 594 SVVSMNALIAGYA-QINLEQAVNLFRDM-LVEGINSTEITFASLLDACHEQQKLNLGRQI 651

Query: 301 HGYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H   ++  L  D   +  SL+  Y  S   + A +LF+  +     V W +MISG     
Sbjct: 652 HSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQND 711

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  L+KEM         +T ++ L +C    S++ G   H      GF ++ +  +
Sbjct: 712 CSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSS 771

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CGD+ ++  + + +S   D   WN +IV   +NG+ ++A++ F  M +Q + 
Sbjct: 772 ALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEM-KQSHV 830

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           +PD VT + V++AC +     EG+ +  + + +L G+  R  +   ++ + GR   +K A
Sbjct: 831 TPDDVTFLGVLTACSHSGRVSEGRLIFDMMV-NLYGMQPRADHCACMVDLLGRWGSLKEA 889

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILS 577
                   +  +   W  M+ A   +  ++R  +    L E EP   S   +LS
Sbjct: 890 EEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLS 943



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 185/411 (45%), Gaps = 53/411 (12%)

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF E+    SQFS +                  K IH   LKLGF +  +  N ++ +Y 
Sbjct: 63  LFDEIPQRLSQFSTTN-----------------KIIHAQSLKLGFWSKGVLGNVIVDLYA 105

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C D+  A    +++  + D   WN ++   ++ G     +K F  +       P+  T 
Sbjct: 106 KCADVDYAERAFKQL-EDKDILAWNSILSMHSKQGFPHLVVKYF-GLLWNSGVWPNEFTF 163

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESC 532
             V+S+C  LE+   G+ +H   +K  MG +  +  + ALI MY +C  +  A ++F+  
Sbjct: 164 AIVLSSCARLEMVKCGRQVHCNVVK--MGFESISYCEGALIGMYAKCNFLTDARSIFDGA 221

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGK 589
              +  +W  MI  + +      A+++F+ +E    EP++++ V++++A   LG L +  
Sbjct: 222 VELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDN-- 279

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
                            +S L     N ++  AW+ MIS +   G G EAIE F  M  +
Sbjct: 280 -----------------ASDLFSRMPN-RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKA 321

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           GI+ T+S++ S+LSA +    +D GL  +   L++  +         +V M  + GK++ 
Sbjct: 322 GIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQ-GLHSNVYVGSSLVSMYAKCGKMEA 380

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           A +    L  Q    +W AML     +G      +V EL F +  ++ G+Y
Sbjct: 381 AKKVFDTLNEQ-NVVLWNAMLGGYVQNG---YANEVMELFFNM--KSCGFY 425



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 27/311 (8%)

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H  +LK        + N ++ +Y +C D+  A   F+   + ++  WN ++S  S+ 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 551 KAE---VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                 V+   L  +    PNE +   +LS+C +L +++ G+Q+H +V  +GF+  S+  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 608 SALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            AL+ MY+ C                   +W+SMI  Y   G   EA+++F EM   G  
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P + + +++++A    G +D     ++ M     V         ++    + G   EA E
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWN-----LMISGHAKGGYGVEAIE 313

Query: 713 FIKNLP---IQPKPGVWGAMLSACSHHGDTKMGKQV-AELLFKLEPENVGYYISLSNMYV 768
           F +N+    I+      G++LSA +       G  V AE L +    NV    SL +MY 
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYA 373

Query: 769 ALGRWKDAVEI 779
             G+ + A ++
Sbjct: 374 KCGKMEAAKKV 384


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 215/730 (29%), Positives = 381/730 (52%), Gaps = 46/730 (6%)

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS-WN 143
           ++  L +G++VH   ++ G   +  L N+ + MY  CG+++ +   F        V+ +N
Sbjct: 54  RLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYN 113

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            ++S    N    + L  +  M   G + D ++    + + + +G L   + IHA  I+ 
Sbjct: 114 QMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEA 173

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
                  +S+ N+L++MY +CG +E A + F G+  +D VSW ++I  +A NG  +EA D
Sbjct: 174 PQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALD 233

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L  +M     ++PD  T  + +  C     L +G+++H   +   +  D +  ++L++ Y
Sbjct: 234 LYQQMD-ADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNMESDFVG-SALINMY 288

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TL 371
           ++   +S A   F  I   + +V W S+++       ++E L L  +           T 
Sbjct: 289 ARCGDVSSARQAFEKIQNKH-VVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTY 347

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           +  L +C S  +L+ GK+IH    + GF +  +   AL+ MY  CG+L AA ++  R+  
Sbjct: 348 VTALGACASLGALKEGKAIHSRVFECGFQSLVVHT-ALLTMYAKCGELDAARAVFNRVRQ 406

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
             +  CW  +I A  Q GH QEA++ +  M  +    P+  T  NV++AC   G+LE   
Sbjct: 407 KRNVYCWTAMISAYAQAGHTQEALELYDQMVAE-GTRPNEYTFSNVLAACSSSGDLE--- 462

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G  +HG    S +  +  VQNAL+TMY +C  ++ A + FE+    +L +WN MI A++
Sbjct: 463 AGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYA 522

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF-HLGFQENS 604
           Q+     AL+L++ +  +   P+E++I S LSAC   G L+ G++IH  V  +  F+ + 
Sbjct: 523 QHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSL 582

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + +AL++MY  C               +   +W++M SAY   G   + ++L+ EM   
Sbjct: 583 MVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLH 642

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           GIRP + +  S+L  CSH+GL+  G++ +  M  E++V P  EH +C+VD+LGRSG+L++
Sbjct: 643 GIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRD 702

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A   ++++P QP    W  +L +C  H D    K+ A  + +L+PEN   Y  LS+++ A
Sbjct: 703 AEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTA 762

Query: 770 LGRWKDAVEI 779
            G  ++A+E+
Sbjct: 763 AGLPQEALEV 772



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 339/720 (47%), Gaps = 73/720 (10%)

Query: 13  LLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           L+  Y N      + A F    + K V  +N M++A  +N      L  +  M EEG   
Sbjct: 83  LIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEP 142

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS--SLCNVFVNMYAKCGDLNSSEC 129
           D  T  I++ + + +  L++ R +H   I+A  I     SL N  VNMY KCG +  +  
Sbjct: 143 DKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARK 202

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F G+   D VSW +++S   +N + ++ L  +++M   G Q D+++ +SA+ A     +
Sbjct: 203 VFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACT---K 259

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK IHA  +    E      V ++LI+MY++CGD+ +A +AF  +  K VV W +++
Sbjct: 260 LVDGKAIHARIVSSNMESD---FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLM 316

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +     + EA DL   M     V  D  T VT +  CA    L+EG+++H        
Sbjct: 317 TAYVQTCHYREALDLYGRMD-HEGVHADGVTYVTALGACASLGALKEGKAIHSRVFE--C 373

Query: 310 GYD-LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLC 363
           G+  L++  +L+  Y+K   L  A  +FN +    ++  W +MIS     G  +E L L 
Sbjct: 374 GFQSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELY 433

Query: 364 SQ----------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            Q          ++FS +LA   +C+S   LE G  IH        ++N    NAL+ MY
Sbjct: 434 DQMVAEGTRPNEYTFSNVLA---ACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMY 490

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A S  +  S   D   WN +I A  Q+G  +EA+  +++MT  Q   PD VT
Sbjct: 491 AKCGSLELAKSAFE-ASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMT-SQGVLPDEVT 548

Query: 474 LVNVISAC---GNLELAFEGKSLHGLALK------SLMGLDTRVQNALITMYGRCRDIKS 524
           + + +SAC   G+L+L   G+ +H   LK      SLM     VQ AL+ MYGRC  +++
Sbjct: 549 IASSLSACAISGSLQL---GREIHSRVLKNQSFRSSLM-----VQTALVNMYGRCGRLET 600

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A ++FE     ++ +W  M SA++Q     + L+L+  +      PNEI+  SIL  C+ 
Sbjct: 601 ARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSH 660

Query: 582 LGVLRHGKQ-------------IHGH----VFHLGFQENSFISSALLDMYSNCKSNAAWS 624
            G+L  G +             I  H    V  LG       + AL++       + AW 
Sbjct: 661 AGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWL 720

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-SHSGLVDEGLQYYNNMLE 683
           +++ +   H     A      +    + P  +S+ SLLS+  + +GL  E L+   +M E
Sbjct: 721 TVLGSCKTHSDADTAKRAARRV--KELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKE 778



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 165/617 (26%), Positives = 290/617 (47%), Gaps = 33/617 (5%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L    +L+  Y      E +  +F    N+D V+W +MI++   N      L  + +M 
Sbjct: 180 NLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMD 239

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +GI+ DS T     SAL     L  G+ +H   + + M +D  + +  +NMYA+CGD++
Sbjct: 240 ADGIQPDSITF---TSALLACTKLVDGKAIHARIVSSNMESD-FVGSALINMYARCGDVS 295

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           S+   F  +     V W ++M+  +   +Y E   LY R M   G  AD V+  +A+ A 
Sbjct: 296 SARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGR-MDHEGVHADGVTYVTALGAC 354

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
           A LG L  GK IH+   + G++    + V  +L++MY++CG+++AA   F  +  K +V 
Sbjct: 355 ASLGALKEGKAIHSRVFECGFQS---LVVHTALLTMYAKCGELDAARAVFNRVRQKRNVY 411

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            W A+I  +A  G  +EA +L  +M +     P+  T   +++ C+ S  L  G  +HG+
Sbjct: 412 CWTAMISAYAQAGHTQEALELYDQM-VAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGH 470

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE 358
                L  ++ + N+L+  Y+K  SL  A+  F A +   DLVSWN+MI      GL +E
Sbjct: 471 VENSELASNVAVQNALVTMYAKCGSLELAKSAFEA-SGRKDLVSWNAMIGAYAQHGLGRE 529

Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALM 410
            L L    +         T+ + L +C    SL+ G+ IH   LK   F ++ +   AL+
Sbjct: 530 ALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALV 589

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           +MY  CG L  A S+ + +    D   W  +  A  Q GH  + +  +  M       P+
Sbjct: 590 NMYGRCGRLETARSMFEDMGQR-DVLSWTAMTSAYAQQGHADQVLDLYLEMV-LHGIRPN 647

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL--ITMYGRCRDIKSASTV 528
            +T  +++  C +  L   G     L ++S   +    ++ L  + + GR   ++ A  +
Sbjct: 648 EITFTSILVGCSHAGLLARGVECF-LEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEAL 706

Query: 529 FESC-YNCNLCTWNCMI-SAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC-TQLGVL 585
            ES  Y  +   W  ++ S  + + A+       R  E +P   S+ S+LS+  T  G+ 
Sbjct: 707 VESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAAGLP 766

Query: 586 RHGKQIHGHVFHLGFQE 602
           +   ++   +  +G ++
Sbjct: 767 QEALEVQLSMKEMGLKK 783



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 187/390 (47%), Gaps = 33/390 (8%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L  C    SL  GK +H   L+ G   N    N L+ MY NCG++  A +  Q  +   
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             +C+N ++ A  +NG +  A++ +  M  ++   PD +T   V+ +C  +    E + +
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMC-EEGPEPDKITYFIVLGSCSAVGSLREAREI 166

Query: 494 HGLALKS--LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           H   +++  ++  +  +QNAL+ MYG+C  ++ A  VF+   N +  +W  MIS+++ N 
Sbjct: 167 HASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNG 226

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL+L++ ++    +P+ I+  S L ACT+   L  GK IH  +      E+ F+ S
Sbjct: 227 FCDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNM-ESDFVGS 282

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL++MY+ C               K    W+S+++AY       EA++L+  M + G+  
Sbjct: 283 ALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHA 342

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEA 710
              + ++ L AC+  G + EG   ++ + E   +  V      H  ++ M  + G+L  A
Sbjct: 343 DGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVV-----HTALLTMYAKCGELDAA 397

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
                 +  +     W AM+SA +  G T+
Sbjct: 398 RAVFNRVRQKRNVYCWTAMISAYAQAGHTQ 427



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 6/284 (2%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           +++    +L+T Y+     E + + F  +  KD+V+WNAMI A  ++      L  +  M
Sbjct: 478 SNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTM 537

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGD 123
             +G+  D  T+   +SA      L+ GR +H   +K      S +     VNMY +CG 
Sbjct: 538 TSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGR 597

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L ++   F  M   D +SW  + S      + ++ L  + EM   G + + ++ +S +  
Sbjct: 598 LETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVG 657

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DV 242
            +  G L+ G V   L ++  +E  P       ++ +  + G +  AE     M  + D 
Sbjct: 658 CSHAGLLARG-VECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDS 716

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           V+W  ++     +   + A       + ++ ++P+  ++ +L+S
Sbjct: 717 VAWLTVLGSCKTHSDADTA---KRAARRVKELDPENTSLYSLLS 757



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + F + L   T+L+  Y      E++ ++F +   +DV++W AM +A  +       L  
Sbjct: 576 QSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDL 635

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC-LSIKAGM----IADSSLCNVFV 115
           + EMV  GIR +  T   I+   +    L +G  V C L +++      I +  LC   V
Sbjct: 636 YLEMVLHGIRPNEITFTSILVGCSHAGLLARG--VECFLEMQSEHEVVPIREHFLC--MV 691

Query: 116 NMYAKCGDLNSSECTFSGM-HCADTVSWNTIMSGC 149
           ++  + G L  +E     M +  D+V+W T++  C
Sbjct: 692 DLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSC 726


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 240/798 (30%), Positives = 395/798 (49%), Gaps = 77/798 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  YS       +  +F    + D V+W AMI   V+       L  F +M + G+  
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D    + +++A     C+  GR+                C++FV M              
Sbjct: 282 DQVAFVTVITA-----CVGLGRL-------------DDACDLFVQMPN------------ 311

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                 + V+WN ++SG +      + + +F+ M  +G ++   +L S ++A A L  L+
Sbjct: 312 -----TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN 366

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG ++HA  IK G   + YV   +SLI+MY++C  +EAA++ F  +  +++V WNA++ G
Sbjct: 367 YGLLVHAQAIKQGLNSNVYVG--SSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG   +   L  EM+      PD  T  +++S CA    L  GR +H + I+    Y
Sbjct: 425 YAQNGYASKVMKLFSEMRGC-GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +L + N+L+D Y+K  +L +A   F  I    D VSWN++I G            +F+ M
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRN-RDNVSWNAIIVGYVQEEDEDEAFNMFRRM 542

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +         +L +IL  C + ++LE G+ +HC+ +K G        ++L+ MY+ CG +
Sbjct: 543 ILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAI 602

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            AA  +   +   S  S  N +I    QN    EAI  F+ M Q +  +P  +T  +++ 
Sbjct: 603 EAARYVFSCMPSRSVVS-MNAIIAGYAQN-DLVEAIDLFQEM-QNEGLNPSEITFASLLD 659

Query: 480 AC-GNLELAFEGKSLHGLALKSLMGLDTRVQN-ALITMYGRCRDIKSASTVF-ESCYNCN 536
           AC G  +L   G+ +H L  K  +  D      +L+ MY   +    A  +F E  Y  +
Sbjct: 660 ACTGPYKLNL-GRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKS 718

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHG 593
              W  +IS  +QN     AL+L++ +      P++ +  S+L AC+ L  L  G+ IH 
Sbjct: 719 TILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHS 778

Query: 594 HVFHLGFQENSFISSALLDMYSNC---KSNA-------------AWSSMISAYGYHGKGW 637
            +FH+G   +    SA++DMY+ C   KS+              +W+SMI  +  +G   
Sbjct: 779 LIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAE 838

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
            A+++F EM ++ IRP   + + +L+ACSH+G V EG + ++ M+  Y + P  +H  C+
Sbjct: 839 NALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACM 898

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           +D+LGR G L+EA EFI  L  +P   +W  +L AC  HGD   G++ AE L +LEPEN 
Sbjct: 899 IDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENS 958

Query: 758 GYYISLSNMYVALGRWKD 775
             Y+ LSN+Y A G W +
Sbjct: 959 SPYVLLSNIYAASGNWDE 976



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 213/847 (25%), Positives = 381/847 (44%), Gaps = 127/847 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +     ++++  Y+     E +   F +   +D++ WN++++       +   +  F
Sbjct: 111 GFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCF 170

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G +   G+  +  T  I++S+  ++  +  G+ VHC  IK G   +S      ++MY+KC
Sbjct: 171 GSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKC 230

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   DTVSW  +++G +    PE+ L  F +M   G   D V+  + +
Sbjct: 231 GSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVI 290

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             +AC+G                                    G ++ A   F  M   +
Sbjct: 291 --TACVG-----------------------------------LGRLDDACDLFVQMPNTN 313

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV+WN +I G    G   EA D    M     V+   +T+ +++S  A    L  G  VH
Sbjct: 314 VVAWNVMISGHVKRGCDIEAIDFFKNM-WKTGVKSTRSTLGSVLSAIASLEALNYGLLVH 372

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             AI++ L  ++ + +SL++ Y+K   +  A+ +F+A+   N LV WN+M+ G       
Sbjct: 373 AQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN-LVLWNAMLGGYAQNGYA 431

Query: 355 -----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                LF EM    +   +F++++   IL +C   E LE G+ +H + +K  F  N    
Sbjct: 432 SKVMKLFSEMRGCGFWPDEFTYTS---ILSACACLECLEMGRQLHSFIIKHNFEYNLFVE 488

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N L+ MY  CG L  A    + I  N D   WN +IV   Q     EA   F+ M     
Sbjct: 489 NTLVDMYAKCGALEEARQQFEFI-RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI-LDG 546

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            +PD V+L +++S C NL+   +G+ +H   +KS +       ++LI MY +C  I++A 
Sbjct: 547 IAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAAR 606

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            VF    + ++ + N +I+ ++QN   V A++LF+ ++ E   P+EI+  S+L ACT   
Sbjct: 607 YVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPY 665

Query: 584 VLRHGKQIHGHVFHLG-FQENSFISSALLDMYSNC----------------KSNAAWSSM 626
            L  G+QIH  +   G   +  F+  +LL MY N                 KS   W+++
Sbjct: 666 KLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAI 725

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           IS +  +G   EA++L+ EM  +  RP +++  S+L ACS    + +G +  ++++    
Sbjct: 726 ISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG-RMIHSLIFHVG 784

Query: 687 VRPETEHHVCIVDMLGRSGKLQEA-----------------------------------Y 711
           +  +      +VDM  + G ++ +                                   +
Sbjct: 785 LDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIF 844

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEP--ENVGYYISLSNM 766
           + +K+  I+P    +  +L+ACSH G    G+++ +++   +K+ P  ++    I L   
Sbjct: 845 DEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDL--- 901

Query: 767 YVALGRW 773
              LGRW
Sbjct: 902 ---LGRW 905



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 191/758 (25%), Positives = 333/758 (43%), Gaps = 112/758 (14%)

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
           +  + +H  ++K G  +   L +  V++YAKCG++  +   F+ +   D ++WN+++S  
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
                 E+ +  F  +   G   +  + +  +++ A L ++  GK +H   IK+G+E + 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +     SLI MYS+CG +  A + F  +   D VSW A+I G+   G  EEA  +  +MQ
Sbjct: 218 FCE--GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
            +  V PD    VT+I+ C                        L  ++   D + +    
Sbjct: 276 KLGLV-PDQVAFVTVITACV----------------------GLGRLDDACDLFVQ---- 308

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
                      P  ++V+WN MISG             FK M     + + STL ++L +
Sbjct: 309 ----------MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
             S E+L +G  +H   +K G ++N    ++L++MY  C  + AA  +   +    +   
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER-NLVL 417

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN ++    QNG+  + +K F  M +     PD  T  +++SAC  LE    G+ LH   
Sbjct: 418 WNAMLGGYAQNGYASKVMKLFSEM-RGCGFWPDEFTYTSILSACACLECLEMGRQLHSFI 476

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K     +  V+N L+ MY +C  ++ A   FE   N +  +WN +I  + Q + E  A 
Sbjct: 477 IKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAF 536

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            +FR +  +   P+E+S+ SILS C  L  L  G+Q+H  +   G Q   +  S+L+DMY
Sbjct: 537 NMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMY 596

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
             C               +S  + +++I+ Y       EAI+LF EM N G+ P++ +  
Sbjct: 597 VKCGAIEAARYVFSCMPSRSVVSMNAIIAGYA-QNDLVEAIDLFQEMQNEGLNPSEITFA 655

Query: 660 SLLSACS-----------HSGLVDEGLQYYNNML---------------------EEYDV 687
           SLL AC+           H  +   GL Y  + L                      E+  
Sbjct: 656 SLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQY 715

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQ 744
              T     I+    ++G  +EA +  + +     +P    + ++L ACS       G+ 
Sbjct: 716 PKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRM 775

Query: 745 VAELLFKL---EPENVGYYISLSNMYVALGRWKDAVEI 779
           +  L+F +     E  G   ++ +MY   G  K +V++
Sbjct: 776 IHSLIFHVGLDSDELTGS--AVVDMYAKCGDMKSSVQV 811



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 171/594 (28%), Positives = 277/594 (46%), Gaps = 23/594 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  +++   +SL+  Y+     E++  +F     +++V WNAM+    +N      +  
Sbjct: 378 QGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKL 437

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM   G   D  T   I+SA   + CL+ GR +H   IK     +  + N  V+MYAK
Sbjct: 438 FSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAK 497

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  +   D VSWN I+ G +     ++    FR M   G   D VSL+S 
Sbjct: 498 CGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASI 557

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A L  L  G+ +H   +K G +   Y    +SLI MY +CG IEAA   F  M  +
Sbjct: 558 LSGCANLQALEQGEQVHCFLVKSGLQTCLYAG--SSLIDMYVKCGAIEAARYVFSCMPSR 615

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VVS NAII G+A N    EA DL  EMQ    + P   T  +L+  C     L  GR +
Sbjct: 616 SVVSMNAIIAGYAQN-DLVEAIDLFQEMQ-NEGLNPSEITFASLLDACTGPYKLNLGRQI 673

Query: 301 HGYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H    +R L YD   +  SL+  Y  S   + A++LF+        + W ++ISG     
Sbjct: 674 HCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNG 733

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  L++EM    ++   +T  ++L +C+   SL  G+ IH     +G  ++ +  +
Sbjct: 734 CSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGS 793

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           A++ MY  CGD+ ++  + + +   +D   WN +IV   +NG+ + A+K F  M +    
Sbjct: 794 AVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEM-KHTRI 852

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
            PD VT + V++AC +     EG+ +  + + S   +  R+ +   +I + GR   +K A
Sbjct: 853 RPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYK-IVPRLDHCACMIDLLGRWGFLKEA 911

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILS 577
               +   +  N   W  ++ A   +  ++R       L E EP   S   +LS
Sbjct: 912 EEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLS 965



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 190/426 (44%), Gaps = 47/426 (11%)

Query: 325 KSNSLS-KAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           +SNSLS   +  F+ I    +  S + + + L K  L  C +          P   +P+ 
Sbjct: 38  RSNSLSFHHQSNFSTIQRQVNQTSEHKIFTHLLKICLQQCQRIKIRH-----PFDETPQR 92

Query: 384 L----EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL---VAAFSLLQRISHNSDTS 436
           L       K+IH   LK GF +     +A++ +Y  CG++     AF+ L++     D  
Sbjct: 93  LAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEK----RDIL 148

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN V+   ++ G  ++ I  F S+ Q    SP+  T   V+S+C  L     GK +H  
Sbjct: 149 AWNSVLSMYSRQGSLEQVIWCFGSL-QNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCG 207

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K     ++  + +LI MY +C  +  A  +F++  + +  +W  MI+ + Q      A
Sbjct: 208 VIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEA 267

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L++F  ++     P++++ V++++AC  LG L                          D+
Sbjct: 268 LKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDA----------------------CDL 305

Query: 614 YSNCKSN--AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
           +    +    AW+ MIS +   G   EAI+ F  M  +G++ T+S++ S+LSA +    +
Sbjct: 306 FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           + GL  +   +++  +         +++M  +  K++ A +    L  +    +W AML 
Sbjct: 366 NYGLLVHAQAIKQ-GLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWNAMLG 423

Query: 732 ACSHHG 737
             + +G
Sbjct: 424 GYAQNG 429


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 228/734 (31%), Positives = 377/734 (51%), Gaps = 38/734 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I  AL+  + L + R +H L I  G+ +        ++ Y+   +  SS   F  +  A 
Sbjct: 10  ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+     N    + L ++ ++  S    D  +  S + A A L +   G +++
Sbjct: 70  NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + +G+E   +V   N+L+ MYS+ G +  A + F  M  +D+VSWN++I G++ +G 
Sbjct: 130 EQILDMGFESDLFVG--NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           +EEA ++ HE++    + PD  TV +++    + L++++G+ +HG+A++  +   +++ N
Sbjct: 188 YEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-EM------LYL--CSQFS- 367
            L+  Y K    + A  +F+ +  + D VS+N+MI G  K EM      ++L    QF  
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP 305

Query: 368 -FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T+ ++L +C     L   K I+ + LK GF   +   N L+ +Y  CGD++ A  + 
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL-E 485
             +    DT  WN +I    Q+G   EA+K FK M   +  + D +T + +IS    L +
Sbjct: 366 NSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISVSTRLAD 423

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L F GK LH   +KS + +D  V NALI MY +C ++  +  +F S    +  TWN +IS
Sbjct: 424 LKF-GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482

Query: 546 A---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A   F      ++     R  E  P+  + +  L  C  L   R GK+IH  +   G++ 
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
              I +AL++MYS C               +    W+ MI AYG +G+G +A+E F +M 
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
            SGI P     I+++ ACSHSGLVDEGL  +  M   Y + P  EH+ C+VD+L RS K+
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            +A EFI+ +PI+P   +W ++L AC   GD +  ++V+  + +L P++ GY I  SN Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722

Query: 768 VALGRWKDAVEIGK 781
            AL +W     I K
Sbjct: 723 AALRKWDKVSLIRK 736



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 281/595 (47%), Gaps = 23/595 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L+  YS+     SSL++F      K+V  WN++I A  +N      L F+G++ E  
Sbjct: 42  SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  T   ++ A   +   + G +V+   +  G  +D  + N  V+MY++ G L  + 
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSWN+++SG   + Y E+ L  + E+  S    D+ ++SS + A   L 
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G+ +H   +K G      V V N L++MY +      A R F  M  +D VS+N +
Sbjct: 222 VVKQGQGLHGFALKSGVNSV--VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+      EE+  +   ++ +   +PD+ TV +++  C     L   + ++ Y ++  
Sbjct: 280 ICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              +  + N L+D Y+K   +  A  +FN++    D VSWNS+ISG            LF
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDLMEAMKLF 396

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K M+ +  Q    T L ++        L+FGK +H   +K G   +    NAL+ MY  C
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++  +  +   +    DT  WN VI AC + G F   ++    M ++    PD  T + 
Sbjct: 457 GEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQM-RKSEVVPDMATFLV 514

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            +  C +L     GK +H   L+     + ++ NALI MY +C  ++++S VFE     +
Sbjct: 515 TLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           + TW  MI A+       +ALE F  +E     P+ +  ++I+ AC+  G++  G
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/616 (26%), Positives = 285/616 (46%), Gaps = 49/616 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  YS +     +  +F E   +D+V+WN++I+    +      L  +
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E+    I  DS T+  ++ A   +  +KQG+ +H  ++K+G+ +   + N  V MY K 
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                +   F  M   D+VS+NT++ G L     E+ +  F E      + D +++SS +
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVL 314

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L +LS  K I+   +K G+      +V N LI +Y++CGD+  A   F  M CKD
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLES--TVRNILIDVYAKCGDMITARDVFNSMECKD 372

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN+II G+  +G   EA  L   M +M   + D  T + LIS+      L+ G+ +H
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLH 431

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
              I+  +  DL + N+L+D Y+K   +  +  +F+++    D V+WN++IS     G F
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDF 490

Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
              L + +Q          +T L  LP C S  +   GK IHC  L+ G+ +     NAL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  +  + +R+S   D   W  +I A    G  ++A++TF  M ++    P
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALETFADM-EKSGIVP 608

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV  + +I AC +  L  EG +     +K+   +D  +++                   
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFE-KMKTHYKIDPMIEH------------------- 648

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++   S+++   +A E  + +  +P+     S+L AC   G +   +
Sbjct: 649 ----------YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698

Query: 590 QIHGHVFHLGFQENSF 605
           ++   +  L   +  +
Sbjct: 699 RVSRRIIELNPDDPGY 714


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 227/795 (28%), Positives = 402/795 (50%), Gaps = 74/795 (9%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y+     + S  +F     +D+++WNAM++    N C    +    EM + G+R
Sbjct: 178 TALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMR 237

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +++T + IV     +     G  +H  ++K G+I D SL +  + MYA   DL+SS   
Sbjct: 238 PNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMV 297

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D VS+N+++S  + ++  ++    FR M     + + V++ S + + +    +
Sbjct: 298 FDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGI 357

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           ++G+ +H + IKLG  +  +VSV ++L+SMYS+ G ++++   F    C           
Sbjct: 358 NHGESVHGMIIKLGLAE--HVSVASALVSMYSKLGKLDSSLLLFC--CC----------- 402

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
                                  V PD  T++ +IS C  +  L   +S+H YA+R    
Sbjct: 403 -----------------------VAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFE 439

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               +MN+L+  Y+    +S +  LF  +  +  L+SWN+MISG            LF +
Sbjct: 440 SYHSVMNALLAMYADCRDISTSHTLFQKME-VRMLISWNTMISGFAEIGDSDTCLILFCQ 498

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M +   QF   TL+ ++ S + P     G+S+H   +K G +++    NAL+ MY NCG 
Sbjct: 499 MFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGI 558

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + A   L      + +T  +N ++    +N    + +  F  M +  +  P+ VTL+N++
Sbjct: 559 VEAGQQLFDSCC-SRNTITYNALMSGYRKNNISAKILPLFYQMVEN-DEKPNLVTLLNLL 616

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
             C +     +GK +H  A+++   L+T +  + + MY R  +I+  S +F      NL 
Sbjct: 617 PVCQS---QLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLI 673

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN  +SA  Q K     ++ F+H+ F    P+ +++++++SAC+QLG       I   +
Sbjct: 674 VWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLALISACSQLGNAYFAACIMAVI 733

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              GF  N  + +AL+D +S C               K +  W +MI+AY  HG G  A+
Sbjct: 734 LQKGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMINAYSMHGNGEAAL 793

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF  M +SG+ P   + +S+LSAC+H+GLV++G   + ++  +Y + P  EH+ C+VD+
Sbjct: 794 DLFSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDL 853

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G L EAY+ ++++P +P   +  ++L AC  HG+ K+G+ + +LL K E      Y
Sbjct: 854 LGRTGHLDEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIKSEYGKSRSY 913

Query: 761 ISLSNMYVALGRWKD 775
           + LSN+Y + G+W D
Sbjct: 914 VMLSNIYASAGKWSD 928



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 190/746 (25%), Positives = 352/746 (47%), Gaps = 74/746 (9%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           LH + E+   G   D+ T   ++ A T ++CL+ GR +HC  ++ G   +  +    +++
Sbjct: 126 LHLYRELCCFG--SDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDL 183

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK G ++ S   F  M   D +SWN ++SG   N    + +   +EM   G + +  + 
Sbjct: 184 YAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTF 243

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
              V     +G+   G  +HA  +K G  +    S+T++LI+MY+   D+ ++   F   
Sbjct: 244 VGIVGMCGSVGDRDVGDSLHAFALKGGVINDE--SLTSALITMYAAFDDLSSSRMVFDLH 301

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KD+VS+N++I  +  +  ++EAF++   M  + +V P++ TVV+++  C+D   +  G
Sbjct: 302 PVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCV-AVRPNLVTVVSVLPSCSDFFGINHG 360

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISGLF 356
            SVHG  I+  L   + + ++L+  YSK   L  + LLF   +AP               
Sbjct: 361 ESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLFCCCVAP--------------- 405

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                       +T++ ++  C   + L   KSIH + ++  F +    +NAL+ MY +C
Sbjct: 406 ----------DATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADC 455

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            D+  + +L Q++      S WN +I    + G     +  F  M  ++    D VTL+ 
Sbjct: 456 RDISTSHTLFQKMEVRMLIS-WNTMISGFAEIGDSDTCLILFCQMFHEE-VQFDLVTLIG 513

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +IS+      A  G+S+H LA+KS    D  + NALITMY  C  +++   +F+SC + N
Sbjct: 514 LISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRN 573

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC-TQLGVLRHGKQIH 592
             T+N ++S + +N    + L LF  +   + +PN ++++++L  C +QL     GK IH
Sbjct: 574 TITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVCQSQL----QGKCIH 629

Query: 593 GH-VFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKG 636
            + V +    E    +SA + MYS                 ++   W++ +SA     + 
Sbjct: 630 SYAVRNFTRLETPLFTSA-MGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQA 688

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
              ++ F  M    +RP   ++++L+SACS  G       Y+   +    ++     ++ 
Sbjct: 689 DMVVDCFKHMLFLNVRPDAVTMLALISACSQLGNA-----YFAACIMAVILQKGFSTNIL 743

Query: 697 I----VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK- 751
           +    +D   R G +  A E   +  ++     WGAM++A S HG+ +    +  ++   
Sbjct: 744 VLNALIDTHSRCGSISLARELFDS-SVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDS 802

Query: 752 -LEPENVGYYISLS----NMYVALGR 772
            ++P+++ +   LS    N  V  GR
Sbjct: 803 GVDPDDITFVSILSACAHNGLVEQGR 828



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 234/508 (46%), Gaps = 37/508 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE----NRCVVMGLHFFGEMVEE 67
           +LL  Y++     +S  LF +   + +++WN MI+   E    + C+++    F +M  E
Sbjct: 447 ALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLIL----FCQMFHE 502

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            ++FD  TL+ ++S+ +       G  VH L+IK+G  +D SL N  + MYA CG + + 
Sbjct: 503 EVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAG 562

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F      +T+++N +MSG   NN   K L  F +M  + E+ + V+L + +    C 
Sbjct: 563 QQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLP--VCQ 620

Query: 188 GELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            +L  GK IH+  ++     ++P  +   S + MYS+  +IE   + F  +  ++++ WN
Sbjct: 621 SQLQ-GKCIHSYAVRNFTRLETPLFT---SAMGMYSRFNNIEYCSKIFSLIGARNLIVWN 676

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A +       + +   D    M L  +V PD  T++ LIS C+          +    ++
Sbjct: 677 AFLSACVQCKQADMVVDCFKHM-LFLNVRPDAVTMLALISACSQLGNAYFAACIMAVILQ 735

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           +    ++L++N+L+D +S+  S+S A  LF++ +   D V+W +MI+             
Sbjct: 736 KGFSTNILVLNALIDTHSRCGSISLARELFDS-SVEKDSVTWGAMINAYSMHGNGEAALD 794

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMY 413
           LF  M+         T ++IL +C     +E G+++    Q   G +        ++ + 
Sbjct: 795 LFSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLL 854

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G L  A+ +++ +      +    ++ AC  +G+++      K + + +     S  
Sbjct: 855 GRTGHLDEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIKSEYGKSRSYV 914

Query: 474 LVNVI-------SACGNLELAFEGKSLH 494
           +++ I       S C  L L  E K L 
Sbjct: 915 MLSNIYASAGKWSDCEQLRLDMEAKGLR 942



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 201/455 (44%), Gaps = 65/455 (14%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V S N  +  F+ +G   E   L  E+    S   D  T   +I  C     LR GR +H
Sbjct: 106 VYSLNLAVRCFSDHGFHRELLHLYRELCCFGS---DNFTFPPVIRACTAVSCLRLGREMH 162

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
              +R   G ++ +  +L+D Y+K+  +  +  +F+ +  + DL+SWN+M+SG      F
Sbjct: 163 CRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMV-LRDLISWNAMVSGYSLNECF 221

Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +E + +  +        + ST + I+  C S    + G S+H + LK G  N+    +AL
Sbjct: 222 REAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSAL 281

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY    DL ++  +   +    D   +N +I A  Q+  ++EA + F+ M       P
Sbjct: 282 ITMYAAFDDLSSSRMVFD-LHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLM-HCVAVRP 339

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VT+V+V+ +C +      G+S+HG+ +K  +     V +AL++MY +   + S+  +F
Sbjct: 340 NLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLF 399

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
             C                                  P+  +I++++S C     L   K
Sbjct: 400 CCC--------------------------------VAPDATTIMNVISGCRYTKDLHMAK 427

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHG 634
            IH +     F+    + +ALL MY++C+  +               +W++MIS +   G
Sbjct: 428 SIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIG 487

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                + LF +M +  ++    ++I L+S+ S  G
Sbjct: 488 DSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPG 522



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 107/224 (47%), Gaps = 3/224 (1%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P  TS +  YS  +  E    +F     ++++ WNA ++ACV+ +   M +  F  M+  
Sbjct: 642 PLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLFL 701

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +R D+ T+L ++SA +Q+        +  + ++ G   +  + N  ++ +++CG ++ +
Sbjct: 702 NVRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLA 761

Query: 128 ECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
              F      D+V+W  +++   +H N  E  L  F  M  SG   D+++  S ++A A 
Sbjct: 762 RELFDSSVEKDSVTWGAMINAYSMHGN-GEAALDLFSMMIDSGVDPDDITFVSILSACAH 820

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
            G +  G+ +    ++  Y  +P +     ++ +  + G ++ A
Sbjct: 821 NGLVEQGRTLFK-SLQADYGITPRMEHYACMVDLLGRTGHLDEA 863



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 5/158 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  ++    +L+  +S       +  LF  +  KD VTW AMI A   +      L  
Sbjct: 736 KGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDL 795

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV-HCLSIKAGMIADSSLCNVFVNMYA 119
           F  M++ G+  D  T + I+SA      ++QGR +   L    G+          V++  
Sbjct: 796 FSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLLG 855

Query: 120 KCGDLNSSECTFSGM--HCADTVSWNTIMSGC-LHNNY 154
           + G L+ +      M    +D +   +++  C  H NY
Sbjct: 856 RTGHLDEAYDVVRSMPFRPSDNL-LESLLGACRFHGNY 892


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 209/701 (29%), Positives = 346/701 (49%), Gaps = 40/701 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  Y+  GD++++   F GM   D VSWN ++SG       ++ +  F EM 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  + +  + + + L ELS G  +HAL +K G E    V   ++L+ MY +C  
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRS 199

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTL 284
           ++ A   F+GM  ++ VSW A I G   N ++    +L  EMQ +     +P  A+    
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA--- 256

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
              CA    L  GR +H +AI+     D ++  +++D Y+K+NSL+ A   F  + P + 
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL-PNHT 315

Query: 345 LVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           + + N+M+ GL            F+ M+    +F   +L  +  +C   +    G+ +HC
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHC 375

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K GF  +    NA++ +Y  C  L+ A+ + Q +    D+  WN +I A  QNGH+ 
Sbjct: 376 LAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYD 434

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           + I  F  M +     PD  T  +V+ AC  L     G  +H   +KS +G D  V + +
Sbjct: 435 DTILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           + MY +C  I  A  + +      + +WN ++S FS NK    A + F  +     +P+ 
Sbjct: 494 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 553

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            +  ++L  C  L  +  GKQIHG +      ++ +ISS L+DMY+ C            
Sbjct: 554 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   +W++MI  Y  HG G EA+ +F  M    + P  ++ +++L ACSH GL D+G
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +Y++ M   Y + P+ EH  C+VD+LGRS   QEA +FI ++P Q    +W  +LS C 
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 733

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              D ++ +  A  +  L+P++   YI LSN+Y   G+W D
Sbjct: 734 IRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 774



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 172/592 (29%), Positives = 287/592 (48%), Gaps = 21/592 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAYS+     +++ALF    + DVV+WNA+++   +       +  F EM   G+  
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +  L  G  VH L++K G+  D    +  V+MY KC  L+ + C F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + VSW   ++GC+ N    + L  F EM   G      S +SA  + A +  L+
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  IK  +     V    +++ +Y++   +  A RAF+G+    V + NA++ G
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G   EA  L   M +  S+  D+ ++  + S CA++    +G+ VH  AI+     
Sbjct: 326 LVRAGLGIEAMGLFQFM-IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L            F EM
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEM 443

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T  ++L +C +  SLE+G  +H   +K G  ++    + ++ MY  CG +
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 503

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  RI      S WN ++   + N   +EA K F  M       PD  T   V+ 
Sbjct: 504 DEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEML-DMGLKPDHFTFATVLD 561

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C NL     GK +HG  +K  M  D  + + L+ MY +C D+  +  VFE     +  +
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           WN MI  ++ +   V AL +F  ++ E   PN  + V++L AC+ +G+   G
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 279/612 (45%), Gaps = 74/612 (12%)

Query: 209 PYVSVTNSLISM-------------------------------YSQCGDIEAAERAFWGM 237
           P   V+N L+ M                               YS  GDI  A   F GM
Sbjct: 50  PTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGM 109

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              DVVSWNA++ G+   G F+E+ DL  EM   R V PD  T   L+  C+    L  G
Sbjct: 110 PDPDVVSWNALVSGYCQRGMFQESVDLFVEMA-RRGVSPDRTTFAVLLKSCSALEELSLG 168

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
             VH  A++  L  D+   ++L+D Y K  SL  A   F  + P  + VSW + I+G   
Sbjct: 169 VQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQ 227

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF EM  L    S  +  +   SC +   L  G+ +H   +K  FS++ + 
Sbjct: 228 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 287

Query: 406 VNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             A++ +Y     L  A  +     +H  +TS  N ++V   + G   EA+  F+ M  +
Sbjct: 288 GTAIVDVYAKANSLTDARRAFFGLPNHTVETS--NAMMVGLVRAGLGIEAMGLFQFMI-R 344

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +   D V+L  V SAC   +  F+G+ +H LA+KS   +D  V NA++ +YG+C+ +  
Sbjct: 345 SSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALME 404

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLEF--EPNEISIVSILSACTQ 581
           A  +F+     +  +WN +I+A  QN   +   L     L F  +P++ +  S+L AC  
Sbjct: 405 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L +G  +H  V   G   ++F++S ++DMY  C               +   +W+++
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 524

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           +S +  + +  EA + F EM + G++P   +  ++L  C++   ++ G Q +  ++++  
Sbjct: 525 LSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEM 584

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQV 745
           +  E      +VDM  + G + ++    +   ++ +  V W AM+   + HG   +G + 
Sbjct: 585 LDDEYISST-LVDMYAKCGDMPDSLLVFEK--VEKRDFVSWNAMICGYALHG---LGVEA 638

Query: 746 AELLFKLEPENV 757
             +  +++ ENV
Sbjct: 639 LRMFERMQKENV 650



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 276/593 (46%), Gaps = 25/593 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    + T ++L+  Y      + +L  FY    ++ V+W A I  CV+N   V GL  F
Sbjct: 179 GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELF 238

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+     +      +   M+CL  GR +H  +IK    +D  +    V++YAK 
Sbjct: 239 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKA 298

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F G+      + N +M G +      + +  F+ M  S  + D VSLS   
Sbjct: 299 NSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVF 358

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A       G+ +H L IK G++    + V N+++ +Y +C  +  A   F GM  KD
Sbjct: 359 SACAETKGYFQGQQVHCLAIKSGFDVD--ICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSV 300
            VSWNAII     NG +++   +LH  +++R  ++PD  T  +++  CA    L  G  V
Sbjct: 417 SVSWNAIIAALEQNGHYDDT--ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+  LG D  + ++++D Y K   + +A+ L + I     +VSWN+++SG      
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG-QQVVSWNAILSGFSLNKE 533

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F EML +  +    T   +L +C +  ++E GK IH   +K    ++    + 
Sbjct: 534 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST 593

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGD+  +  + +++    D   WN +I     +G   EA++ F+ M Q++N  
Sbjct: 594 LVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLGVEALRMFERM-QKENVV 651

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P+  T V V+ AC ++ L  +G     L + +   L+ ++++   ++ + GR +  + A 
Sbjct: 652 PNHATFVAVLRACSHVGLFDDGCRYFHL-MTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
               S  +  +   W  ++S    +   E+  L     L  +P++ S+  +LS
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLS 763



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 56/218 (25%)

Query: 567 PNEISIVSILSACTQLG--VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           P  ++   +  +C Q G   L  G+  H  +   GF   +F+S+ LL MY+ C       
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72

Query: 618 --------KSNAAWSSMISAYGYHGK-----------------GW--------------E 638
                   +   +W++M++AY + G                   W              E
Sbjct: 73  RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHV 695
           +++LF EM   G+ P +++   LL +CS    +  G+Q +   ++   E DVR  +    
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS---- 188

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            +VDM G+   L +A  F   +P +     WGA ++ C
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 209/701 (29%), Positives = 346/701 (49%), Gaps = 40/701 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  Y+  GD++++   F GM   D VSWN ++SG       ++ +  F EM 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  + +  + + + L ELS G  +HAL +K G E    V   ++L+ MY +C  
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRS 199

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTL 284
           ++ A   F+GM  ++ VSW A I G   N ++    +L  EMQ +     +P  A+    
Sbjct: 200 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA--- 256

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
              CA    L  GR +H +AI+     D ++  +++D Y+K+NSL+ A   F  + P + 
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL-PNHT 315

Query: 345 LVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           + + N+M+ GL            F+ M+    +F   +L  +  +C   +    G+ +HC
Sbjct: 316 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHC 375

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K GF  +    NA++ +Y  C  L+ A+ + Q +    D+  WN +I A  QNGH+ 
Sbjct: 376 LAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYD 434

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           + I  F  M +     PD  T  +V+ AC  L     G  +H   +KS +G D  V + +
Sbjct: 435 DTILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 493

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           + MY +C  I  A  + +      + +WN ++S FS NK    A + F  +     +P+ 
Sbjct: 494 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 553

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            +  ++L  C  L  +  GKQIHG +      ++ +ISS L+DMY+ C            
Sbjct: 554 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   +W++MI  Y  HG G EA+ +F  M    + P  ++ +++L ACSH GL D+G
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +Y++ M   Y + P+ EH  C+VD+LGRS   QEA +FI ++P Q    +W  +LS C 
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 733

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              D ++ +  A  +  L+P++   YI LSN+Y   G+W D
Sbjct: 734 IRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 774



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 172/592 (29%), Positives = 287/592 (48%), Gaps = 21/592 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAYS+     +++ALF    + DVV+WNA+++   +       +  F EM   G+  
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +  L  G  VH L++K G+  D    +  V+MY KC  L+ + C F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + VSW   ++GC+ N    + L  F EM   G      S +SA  + A +  L+
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  IK  +     V    +++ +Y++   +  A RAF+G+    V + NA++ G
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G   EA  L   M +  S+  D+ ++  + S CA++    +G+ VH  AI+     
Sbjct: 326 LVRAGLGIEAMGLFQFM-IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 384

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L            F EM
Sbjct: 385 DICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEM 443

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T  ++L +C +  SLE+G  +H   +K G  ++    + ++ MY  CG +
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 503

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  RI      S WN ++   + N   +EA K F  M       PD  T   V+ 
Sbjct: 504 DEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEML-DMGLKPDHFTFATVLD 561

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C NL     GK +HG  +K  M  D  + + L+ MY +C D+  +  VFE     +  +
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           WN MI  ++ +   V AL +F  ++ E   PN  + V++L AC+ +G+   G
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 279/612 (45%), Gaps = 74/612 (12%)

Query: 209 PYVSVTNSLISM-------------------------------YSQCGDIEAAERAFWGM 237
           P   V+N L+ M                               YS  GDI  A   F GM
Sbjct: 50  PNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGM 109

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              DVVSWNA++ G+   G F+E+ DL  EM   R V PD  T   L+  C+    L  G
Sbjct: 110 PDPDVVSWNALVSGYCQRGMFQESVDLFVEMA-RRGVSPDRTTFAVLLKSCSALEELSLG 168

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
             VH  A++  L  D+   ++L+D Y K  SL  A   F  + P  + VSW + I+G   
Sbjct: 169 VQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQ 227

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF EM  L    S  +  +   SC +   L  G+ +H   +K  FS++ + 
Sbjct: 228 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 287

Query: 406 VNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             A++ +Y     L  A  +     +H  +TS  N ++V   + G   EA+  F+ M  +
Sbjct: 288 GTAIVDVYAKANSLTDARRAFFGLPNHTVETS--NAMMVGLVRAGLGIEAMGLFQFMI-R 344

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +   D V+L  V SAC   +  F+G+ +H LA+KS   +D  V NA++ +YG+C+ +  
Sbjct: 345 SSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALME 404

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLEF--EPNEISIVSILSACTQ 581
           A  +F+     +  +WN +I+A  QN   +   L     L F  +P++ +  S+L AC  
Sbjct: 405 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L +G  +H  V   G   ++F++S ++DMY  C               +   +W+++
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 524

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           +S +  + +  EA + F EM + G++P   +  ++L  C++   ++ G Q +  ++++  
Sbjct: 525 LSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEM 584

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQV 745
           +  E      +VDM  + G + ++    +   ++ +  V W AM+   + HG   +G + 
Sbjct: 585 LDDEYISST-LVDMYAKCGDMPDSLLVFEK--VEKRDFVSWNAMICGYALHG---LGVEA 638

Query: 746 AELLFKLEPENV 757
             +  +++ ENV
Sbjct: 639 LRMFERMQKENV 650



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 276/593 (46%), Gaps = 25/593 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    + T ++L+  Y      + +L  FY    ++ V+W A I  CV+N   V GL  F
Sbjct: 179 GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELF 238

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+     +      +   M+CL  GR +H  +IK    +D  +    V++YAK 
Sbjct: 239 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKA 298

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F G+      + N +M G +      + +  F+ M  S  + D VSLS   
Sbjct: 299 NSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVF 358

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A       G+ +H L IK G++    + V N+++ +Y +C  +  A   F GM  KD
Sbjct: 359 SACAETKGYFQGQQVHCLAIKSGFDVD--ICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSV 300
            VSWNAII     NG +++   +LH  +++R  ++PD  T  +++  CA    L  G  V
Sbjct: 417 SVSWNAIIAALEQNGHYDDT--ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+  LG D  + ++++D Y K   + +A+ L + I     +VSWN+++SG      
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG-QQVVSWNAILSGFSLNKE 533

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F EML +  +    T   +L +C +  ++E GK IH   +K    ++    + 
Sbjct: 534 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST 593

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGD+  +  + +++    D   WN +I     +G   EA++ F+ M Q++N  
Sbjct: 594 LVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLGVEALRMFERM-QKENVV 651

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P+  T V V+ AC ++ L  +G     L + +   L+ ++++   ++ + GR +  + A 
Sbjct: 652 PNHATFVAVLRACSHVGLFDDGCRYFHL-MTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
               S  +  +   W  ++S    +   E+  L     L  +P++ S+  +LS
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLS 763



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 56/218 (25%)

Query: 567 PNEISIVSILSACTQLG--VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           P  ++   +  +C Q G   L  G+  H  +   GF  N+F+S+ LL MY+ C       
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACAR 72

Query: 618 --------KSNAAWSSMISAYGYHGK-----------------GW--------------E 638
                   +   +W++M++AY + G                   W              E
Sbjct: 73  RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHV 695
           +++LF EM   G+ P +++   LL +CS    +  G+Q +   ++   E DVR  +    
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS---- 188

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            +VDM G+   L +A  F   +P +     WGA ++ C
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 225


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 207/599 (34%), Positives = 319/599 (53%), Gaps = 34/599 (5%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           VS+T +L S Y + G ++ A   F  M   D   WN +I GF  NG F +A D  H M+ 
Sbjct: 61  VSLTRAL-SSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEF 119

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              V  D  T   +I  C     L EG  VHG  I+  L  D+ + NSL+  Y+K   + 
Sbjct: 120 G-GVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSC 378
            AE++F  + P+ DLVSWNSMISG             F+EM     +    +++ IL +C
Sbjct: 179 SAEMVFREM-PVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +    L  GK IHC  ++     + +   +L+ MY  CG +  A  L  +I+  S  + W
Sbjct: 238 SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA-W 296

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I   + N    E+    + M +     PD +T++N++  C  LE    GKS+HG A+
Sbjct: 297 NAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAI 356

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           ++       ++ AL+ MYG C  +K A  +F      NL +WN MI+++++N    +A+ 
Sbjct: 357 RNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMT 416

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ L     +P+  +I SIL A  +L  LR  +QIHG+V  L    N+F+S++++ MY 
Sbjct: 417 LFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYG 476

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K   +W+++I AY  HG G  +IELF EM   G  P  S+ +S
Sbjct: 477 KCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVS 536

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LL +CS +GLV+EG +Y+N+M  +Y++ P  EH+ CI+D++GR+G L  A  FI+ +P+ 
Sbjct: 537 LLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLA 596

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P   +WG++L+A  + GD ++ +  AE +  LE +N G Y+ LSNMY   GRW+D   I
Sbjct: 597 PTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERI 655



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 282/564 (50%), Gaps = 22/564 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T  L++Y    Y +++L LF      D   WN MI   V+N      + F+  M   G+R
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D+ T   ++ A   +  L +G  VH   IK+G+  D  + N  + MYAK G + S+E  
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D VSWN+++SG +      + L  FREM  SG + D  S+   + A +  G L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   ++   E    V V  SL+ MY++CG ++ AER F  +T K +V+WNA+I 
Sbjct: 244 RNGKEIHCQMMRSRLELD--VMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIG 301

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G++LN +  E+F  + +MQ    + PD  T++ L+  CA    +  G+SVHG+AIR    
Sbjct: 302 GYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             L++  +L+D Y +   L  AE LF  +   N L+SWN+MI+             LF++
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERN-LISWNAMIASYTKNGENRKAMTLFQD 420

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +     +   +T+ +ILP+     SL   + IH +  KL   +NT   N+++ MY  CG+
Sbjct: 421 LCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGN 480

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L+ A  +  R++   D   WN VI+A   +G  + +I+ F  M +++   P+  T V+++
Sbjct: 481 LLRAREIFDRMTF-KDVISWNTVIMAYAIHGFGRISIELFSEM-REKGFEPNGSTFVSLL 538

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESCYNCN 536
            +C    L  EG      ++K    ++  +++   ++ + GR  ++  A    E      
Sbjct: 539 LSCSVAGLVNEGWEYFN-SMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAP 597

Query: 537 LCT-WNCMISAFSQNKAEVRALEL 559
               W  +++A S+NK +V   E+
Sbjct: 598 TARIWGSLLTA-SRNKGDVELAEI 620



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 111/230 (48%), Gaps = 1/230 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL HL   T+L+  Y      + +  LF +   +++++WNAMI +  +N      +  F
Sbjct: 359 GFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLF 418

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            ++  + ++ D+TT+  I+ A  ++  L++   +H    K  + +++ + N  V MY KC
Sbjct: 419 QDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKC 478

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F  M   D +SWNT++     + +    +  F EM   G + +  +  S +
Sbjct: 479 GNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLL 538

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + +  G ++ G   +   +K  Y  +P +     ++ +  + G+++ A+
Sbjct: 539 LSCSVAGLVNEGWE-YFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAK 587


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 235/747 (31%), Positives = 382/747 (51%), Gaps = 82/747 (10%)

Query: 109 SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGW 167
           SLC   +N+YAK G L+     F  M   D V WN ++SG     ++  + +  FR M  
Sbjct: 14  SLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHM 73

Query: 168 SGEQADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             E   N V+++  +   A L E   GK +H+  IK G E   +    N+LISMY++CG 
Sbjct: 74  VNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLES--HTLAGNALISMYAKCGL 130

Query: 227 I-EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           +   A  AF  +  KDVVSWNA+I GF+ N   EEAF L H M L   ++P+ AT+ +++
Sbjct: 131 VCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM-LKGPIQPNYATIASIL 189

Query: 286 SLCA---DSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
            +CA   ++   R G+ VH + +RR+ L  D+ ++NSLM FY +   + KAE LF  +  
Sbjct: 190 PVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKS 249

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGK 388
             DLVSWN++I+G            LF E + L +    S TL+++LP+C    +L+  K
Sbjct: 250 -RDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAK 308

Query: 389 SIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            IH + ++  G   +T   NAL+  Y  C    AA      IS   D   WN ++ A T+
Sbjct: 309 GIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRK-DLISWNAILDAFTE 367

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDT 506
           +G     +     M  ++   PDS+T++ +I     +    + K  H  +++  L+  D 
Sbjct: 368 SGCETHLVNLLHWML-REGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDA 426

Query: 507 --RVQNALITMYGRCRDIKSASTVFES------CYNCN---------------------- 536
              + N ++  Y +C ++K A  +F S         CN                      
Sbjct: 427 GPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTM 486

Query: 537 ----LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
               L TWN M+  +++N    +AL LF  L+    +P+ ++I+SIL AC  +  +   +
Sbjct: 487 SETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLR 546

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           Q HG+V    F +   ++ A +DMYS C               K    +++M+  +  HG
Sbjct: 547 QCHGYVIRACFNDVR-LNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHG 605

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G EA+ +F  M   G++P    + ++L ACSH+GLVDEG + +N++ + +  +P  E +
Sbjct: 606 MGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQY 665

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+L R G++++AY F+  +PI+    +WG +L AC  H + ++G+ VA+ LFK+E 
Sbjct: 666 ACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIES 725

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
           +N+G Y+ +SN+Y A  RW   +EI +
Sbjct: 726 DNIGNYVVMSNLYAADARWDGVMEIRR 752



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 297/647 (45%), Gaps = 64/647 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV---ENRCVVMGLHFFGEMVEEGI 69
           LL  Y+     +    LF E   +D V WN +++       +   VM L     MV E  
Sbjct: 19  LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA- 77

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSE 128
           + +S T+ I++    ++     G+ VH   IK+G+ + +   N  ++MYAKCG + + + 
Sbjct: 78  KPNSVTIAIVLPVCARLR-EDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 136

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+ +   D VSWN +++G   N + E+    F  M     Q +  +++S +   A L 
Sbjct: 137 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 196

Query: 189 E---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           E     YGK +H   ++   E    VSV NSL+S Y + G +E AE  F  M  +D+VSW
Sbjct: 197 ENAGYRYGKEVHCHVLRR-MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSW 255

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII G+A NG++ +A +L  E   + +++PD  T+V+++  CA    L+  + +HGY I
Sbjct: 256 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYII 315

Query: 306 RRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           R   L  D  + N+L+ FY+K N    A   F  I+   DL+SWN+++            
Sbjct: 316 RHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMIS-RKDLISWNAILDAFTESGCETHL 374

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NAL 409
             L   ML    +    T+L I+    +   ++  K  H + ++ G      G    N +
Sbjct: 375 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGM 434

Query: 410 MHMYINCGDLVAAFSLLQRISHN-------------------------------SDTSCW 438
           +  Y  CG++  A ++   +S                                 +D + W
Sbjct: 435 LDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTW 494

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N+++    +N    +A+  F  + Q Q   PD VT+++++ AC ++      +  HG  +
Sbjct: 495 NLMVRVYAENDFPDQALSLFHEL-QGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVI 553

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           ++    D R+  A I MY +C  +  A  +F S    +L  +  M+  F+ +     AL 
Sbjct: 554 RACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALR 612

Query: 559 LFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQ 601
           +F +   L  +P+ + I ++L AC+  G++  G +I   +  + GFQ
Sbjct: 613 IFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQ 659



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/482 (23%), Positives = 216/482 (44%), Gaps = 51/482 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIR 70
           SL++ Y  +   E +  LF    ++D+V+WNA+I     N   +  L  F E +  E I+
Sbjct: 226 SLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIK 285

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            DS TL+ ++ A   ++ L+  + +H   I+  G+  D+S+ N  ++ YAKC    ++  
Sbjct: 286 PDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQ 345

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           TF  +   D +SWN I+     +      +     M   G + D++++ + +   A +  
Sbjct: 346 TFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSR 405

Query: 190 LSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-------- 240
           +   K  H+  I+ G  +     ++ N ++  Y++CG+++ A   F  ++ K        
Sbjct: 406 VKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNS 465

Query: 241 ------------------------DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
                                   D+ +WN ++  +A N   ++A  L HE+Q  + ++P
Sbjct: 466 MISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQ-GQGMKP 524

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           DI T+++++  CA    +   R  HGY IR     D+ +  + +D YSK  S+  A  LF
Sbjct: 525 DIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLF 583

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
            + +P  DLV + +M+ G            +F  ML L  +     + A+L +C+    +
Sbjct: 584 LS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLV 642

Query: 385 EFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           + G  I     K+ GF         ++ +    G +  A++ + R+   ++ + W  ++ 
Sbjct: 643 DEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLG 702

Query: 444 AC 445
           AC
Sbjct: 703 AC 704



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 4/223 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  S+++ Y N S  + + A+F      D+ TWN M+    EN      L  F E+  +G
Sbjct: 462 TCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQG 521

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D  T++ I+ A   M  +   R  H   I+A    D  L   F++MY+KCG +  + 
Sbjct: 522 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA-CFNDVRLNGAFIDMYSKCGSVFGAY 580

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      D V +  ++ G   +   E+ L  F  M   G + D+V +++ + A +  G
Sbjct: 581 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 640

Query: 189 ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
            +  G K+ +++    G++  P +     ++ + ++ G I+ A
Sbjct: 641 LVDEGWKIFNSIEKVHGFQ--PTMEQYACVVDLLARGGRIKDA 681


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 236/762 (30%), Positives = 374/762 (49%), Gaps = 55/762 (7%)

Query: 59  HFFGEMVEEGIRFD-----STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
           HFF + +    RF      S  L +  S       L QG+ +H   +K     DS   + 
Sbjct: 31  HFFTDPLPTTTRFPLQQAYSQALELCASH----KALPQGQQLHAHFLKTQNYLDSVFLDT 86

Query: 114 -FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
            FV+MY KCG    +   F  M      +WN ++  C+      + +  ++EM   G   
Sbjct: 87  KFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSL 146

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +    + A     E   G  IH + +K GY    +V V N+LI+MY++CGD+  A  
Sbjct: 147 DAFTFPCVLKACGAFKERRLGCEIHGVAVKCGY--GGFVFVCNALIAMYAKCGDLGGARV 204

Query: 233 AFWG--MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
            F    M   D VSWN+II      G+  EA  L   MQ +  VE +  T V+ +  C  
Sbjct: 205 LFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEV-GVESNTYTFVSALQACEG 263

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              ++ GR +H   ++     D+ + N+L+  Y+    +  AE +F ++    D VSWN+
Sbjct: 264 PTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSML-FKDCVSWNT 322

Query: 351 MISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           ++SG+ +  +Y  +   F             ++L ++ +     +L  G  +H + +K G
Sbjct: 323 LLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHG 382

Query: 399 FSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             +N    N+L+ MY  C     + +AF  +       D   W  +I    QN    +A+
Sbjct: 383 IDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPE----KDLISWTTIIAGYAQNECHLDAL 438

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
              + + Q +    D + + +++ AC  L+     K +HG  LK  +  D  +QNA++ +
Sbjct: 439 NLLRKV-QLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNV 496

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISI 572
           YG    +  A  VFES  + ++ +W  MI+    N   + ALELF  L     EP+ I++
Sbjct: 497 YGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITL 556

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--NAA-------- 622
           VS+L A   L  L+ GK+IHG +   GF     I+++L+DMY+ C +  NA         
Sbjct: 557 VSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQ 616

Query: 623 -----WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
                W+SMI+A G HG G +AI+LF +M +  + P   + ++LL ACSHSGLV EG Q+
Sbjct: 617 RDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQH 676

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +  M  EY + P  EH+ C+VD+L RS  L+EAY F++N+PI+P   VW A+L AC  H 
Sbjct: 677 FEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHS 736

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +  +G+  A+ L +L  EN G Y+ +SN + A GRW D  E+
Sbjct: 737 NNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEV 778



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 204/745 (27%), Positives = 344/745 (46%), Gaps = 49/745 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + +L  +   T  +  Y     F  ++ +F +   + + TWNAMI ACV     V  +  
Sbjct: 76  QNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIEL 135

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + EM   G+  D+ T   ++ A       + G  +H +++K G      +CN  + MYAK
Sbjct: 136 YKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAK 195

Query: 121 CGDLNSSECTFSG--MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           CGDL  +   F    M   D VSWN+I+S  +      + L  FR M   G +++  +  
Sbjct: 196 CGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFV 255

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           SA+ A      +  G+ IHA+ +K  +    YVS  N+LI+MY+ CG +E AER F  M 
Sbjct: 256 SALQACEGPTFIKIGRGIHAVILKSNHFTDVYVS--NALIAMYANCGQMEDAERVFKSML 313

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD VSWN ++ G   N  + +A +   +MQ     +PD  +V+ +I+    S  L  G 
Sbjct: 314 FKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ-DSGQKPDQVSVLNMIAASGRSANLLAGM 372

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
            VH YAI+  +  ++ + NSL+D Y K   +      F  + P  DL+SW ++I+G  + 
Sbjct: 373 EVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYM-PEKDLISWTTIIAGYAQN 431

Query: 358 ----EMLYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
               + L L  +     +        +IL +C+  +S +  K IH + LK G ++  I  
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQ- 490

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NA++++Y     +  A  + + I+ + D   W  +I  C  NG   EA++ F S+  + N
Sbjct: 491 NAIVNVYGELALVDYARHVFESIN-SKDIVSWTSMITCCVHNGLAIEALELFNSLI-ETN 548

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD +TLV+V+ A   L    +GK +HG  ++    L+  + N+L+ MY RC  +++A 
Sbjct: 549 IEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENAR 608

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            +F      +L  W  MI+A   +     A++LF  +  E   P+ I+ +++L AC+  G
Sbjct: 609 NIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSG 668

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
           ++  GKQ      H    +N +      + Y+      A S+ +             E +
Sbjct: 669 LVVEGKQ------HFEIMKNEYKLEPWPEHYACLVDLLARSNSLE------------EAY 710

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML-- 701
           H + N  I P+     +LL AC      D G      +L+   +  E   +  +V     
Sbjct: 711 HFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQ---LNTENSGNYVLVSNTFA 767

Query: 702 --GRSGKLQEAYEFIKNLPIQPKPG 724
             GR   ++E    +K   ++ KPG
Sbjct: 768 ADGRWNDVEEVRSIMKGNKLKKKPG 792


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 196/593 (33%), Positives = 318/593 (53%), Gaps = 35/593 (5%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY+ CGD++ A R F  +  +  + WN +++  A +G F  +  L  +M +   VE D  
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSY 196

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T   +    +    +  G  +HG+ ++   G    + NSL+ FY K+  +  A  +F+ +
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
               D++SWNS+I+G            +F +ML    +   +T++++   C     +  G
Sbjct: 257 TE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           +++H   +K  FS      N L+ MY  CGDL +A ++ + +S  S  S +  +I    +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-YTSMIAGYAR 374

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            G   EA+K F+ M +++  SPD  T+  V++ C    L  EGK +H    ++ +G D  
Sbjct: 375 EGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---- 563
           V NAL+ MY +C  ++ A  VF      ++ +WN +I  +S+N     AL LF  L    
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
            F P+E ++  +L AC  L     G++IHG++   G+  +  ++++L+DMY+ C      
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K   +W+ MI+ YG HG G EAI LF++M  +GI   + S +SLL ACSHS
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GLVDEG +++N M  E  + P  EH+ CIVDML R+G L +AY FI+N+PI P   +WGA
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +L  C  H D K+ ++VAE +F+LEPEN GYY+ ++N+Y    +W+    + K
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 265/534 (49%), Gaps = 24/534 (4%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL  ++        LK G+ V       G + DS+L +    MY  CGDL  +   F
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +     + WN +M+    +      +  F++M  SG + D+ + S    + + L  + 
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H   +K G+ +    SV NSL++ Y +   +++A + F  MT +DV+SWN+II+G
Sbjct: 213 GGEQLHGFILKSGFGERN--SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG  E+   +  +M L+  +E D+AT+V++ + CADS L+  GR+VH   ++     
Sbjct: 271 YVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +    N+L+D YSK   L  A+ +F  ++  + +VS+ SMI+G            LF+EM
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW--QLKLGFSNNTIGVNALMHMYINCG 417
                     T+ A+L  C     L+ GK +H W  +  LGF  +    NALM MY  CG
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCG 446

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  +   +    D   WN +I   ++N +  EA+  F  + +++  SPD  T+  V
Sbjct: 447 SMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC +L    +G+ +HG  +++    D  V N+L+ MY +C  +  A  +F+   + +L
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
            +W  MI+ +  +     A+ LF   R    E +EIS VS+L AC+  G++  G
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 258/502 (51%), Gaps = 19/502 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+      + L   Y+N    + +  +F E   +  + WN ++    ++      +  F
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  G+  DS T   +  + + +  +  G  +H   +K+G    +S+ N  V  Y K 
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++S+   F  M   D +SWN+I++G + N   EK L  F +M  SG + D  ++ S  
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A  A    +S G+ +H++G+K  +  S      N+L+ MYS+CGD+++A+  F  M+ + 
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACF--SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS+ ++I G+A  G   EA  L  EM+    + PD+ TV  +++ CA   LL EG+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
            +     LG+D+ + N+LMD Y+K  S+ +AEL+F+ +  + D++SWN++I G  K    
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYA 479

Query: 358 -EML----YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            E L     L  +  FS    T+  +LP+C S  + + G+ IH + ++ G+ ++    N+
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L+ A  L   I+ + D   W ++I     +G  +EAI  F  M +Q    
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIE 597

Query: 469 PDSVTLVNVISACGNLELAFEG 490
            D ++ V+++ AC +  L  EG
Sbjct: 598 ADEISFVSLLYACSHSGLVDEG 619



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 219/460 (47%), Gaps = 22/460 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        SL+  Y      +S+  +F E   +DV++WN++I   V N     GL  F
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  GI  D  T++ + +       +  GR VH + +KA    +   CN  ++MY+KC
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL+S++  F  M     VS+ ++++G        + +  F EM   G   D  ++++ +
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404

Query: 182 AASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
              A    L  GK +H   IK   LG++    + V+N+L+ MY++CG ++ AE  F  M 
Sbjct: 405 NCCARYRLLDEGKRVHEW-IKENDLGFD----IFVSNALMDMYAKCGSMQEAELVFSEMR 459

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++SWN II G++ N    EA  L + +   +   PD  TV  ++  CA      +GR
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +HGY +R     D  + NSL+D Y+K  +L  A +LF+ IA   DLVSW  MI+G    
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMH 578

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
                   LF +M     +    + +++L +C+    ++ G +  +  + +         
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
              ++ M    GDL+ A+  ++ +    D + W  ++  C
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 62/364 (17%)

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  TL +V+  C + +   +GK +      +   +D+ + + L  MY  C D+K AS VF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGV 584
           +         WN +++  +++     ++ LF+ +     E +    S VS   + + L  
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS--KSFSSLRS 210

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISA 629
           +  G+Q+HG +   GF E + + ++L+  Y  N + ++A              W+S+I+ 
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL-------------- 675
           Y  +G   + + +F +M  SGI    ++++S+ + C+ S L+  G               
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330

Query: 676 -QYYNNMLEEYD-----------VRPETEHHVC----IVDMLGRSGKLQEA---YEFIKN 716
            ++ N +L+ Y             R  ++  V     ++    R G   EA   +E ++ 
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN----MYVALGR 772
             I P      A+L+ C+ +     GK+V E    ++  ++G+ I +SN    MY   G 
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEW---IKENDLGFDIFVSNALMDMYAKCGS 447

Query: 773 WKDA 776
            ++A
Sbjct: 448 MQEA 451


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 215/700 (30%), Positives = 353/700 (50%), Gaps = 36/700 (5%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  ++ YA CG+++ +   F  M   D VSWN+++SG L N    K +  F EMG  G  
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D  SL+  + A   L E   G  +H L +K G++    V   ++L+ MY++C  ++ + 
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCD--VVTGSALLGMYAKCKRLDDSL 236

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  +  K+ VSW+A+I G   N +  E  +L  EMQ +  V    +   +L   CA  
Sbjct: 237 SVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGV-GVGVSQSIYASLFRSCAAL 295

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             LR G+ +H +A++   G D+++  + +D Y+K   ++ A+ + +++ P   L S+N++
Sbjct: 296 SALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSM-PKCSLQSYNAI 354

Query: 352 ISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           I G             F+ +L     F   TL   L +C S      G+ +H   +K   
Sbjct: 355 IVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSIS 414

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +N    NA++ MY  C  L  A  L   +    D   WN +I AC QNG+ +E +  F 
Sbjct: 415 MSNICVANAILDMYGKCKALAEASDLFDMMERR-DAVSWNAIIAACEQNGNEEETLAHFA 473

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           SM   +   PD  T  +V+ AC   +    G  +H   +KS MG D+ V  AL+ MY +C
Sbjct: 474 SMIHSR-MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKC 532

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEF--EPNEISIVSIL 576
             I+ A  + +      + +WN +IS FS  +    A + F R LE    P+  +  ++L
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             C  L  +  GKQIH  +     Q + +I S L+DMYS C               +   
Sbjct: 593 DTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV 652

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            W++M+  Y +HG G EA++LF  M    ++P  ++ +S+L AC+H GLVD+GL Y++ M
Sbjct: 653 TWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVM 712

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           L EY + P++EH+ C+VD+LGRSG++ EA   ++ +P +    +W  +LS C  HG+ ++
Sbjct: 713 LSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++    L +L+P++    + LSN+Y   G W +  E+ K
Sbjct: 773 AEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRK 812



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 188/746 (25%), Positives = 345/746 (46%), Gaps = 56/746 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +L  + +  S+++ Y++    + +   FYE   +DVV+WN++I+  ++N      +  F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM   G+ FD  +L +++ A   +     G  VH L +K G   D    +  + MYAKC 
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ S   FS +   + VSW+ +++GC+ N+   + L  F+EM   G        +S   
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           + A L  L  GK +H+  +K  +     + V  + + MY++CG +  A++    M    +
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSD--IIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSV 300
            S+NAII G+A   + +  F  L   QL+    +  D  T+   ++ CA      EGR V
Sbjct: 349 QSYNAIIVGYA---RSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           HG A++ +   ++ + N+++D Y K  +L++A  LF+ +    D VSWN++I+       
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFD-MMERRDAVSWNAIIAACEQNGN 464

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F  M++   +    T  ++L +C   ++L  G  IH   +K G   ++    A
Sbjct: 465 EEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAA 524

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG +  A  +  R    +  S WN +I   +     ++A K F  M  +   +
Sbjct: 525 LVDMYCKCGMIEKADKIHDRTEQKTMVS-WNAIISGFSLLQQSEDAHKFFSRML-EMGVN 582

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD+ T   V+  C NL     GK +H   +K  +  D  + + L+ MY +C +++ +  +
Sbjct: 583 PDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLM 642

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           FE   N +  TWN M+  ++ +     AL+LF  ++    +PN  + VS+L AC  +G++
Sbjct: 643 FEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLV 702

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G     H F +           +L  Y     +  +S M+   G  G+  EA+ L  +
Sbjct: 703 DKGL----HYFDV-----------MLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQK 747

Query: 646 MCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML- 701
           M      P ++  +   +LLS C   G V+   +    +L+   + P+      ++  + 
Sbjct: 748 M------PFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQ---LDPQDSSACVLLSNIY 798

Query: 702 ---GRSGKLQEAYEFIKNLPIQPKPG 724
              G  G + E  + +++  ++ +PG
Sbjct: 799 ADAGMWGNVSEMRKMMRHNKLKKEPG 824



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 300/630 (47%), Gaps = 74/630 (11%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ GK  HA  I  G+E + +VS  N L+ MY +C  ++ A + F  M  +DVVS+N+II
Sbjct: 65  LNPGKQAHARMIFCGFEPTTFVS--NCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSII 122

Query: 250 DGFALNGKFEEAFDLLHEM-------------------QLMRSVEP-----------DIA 279
            G+A  G+ + A    +EM                   +  +S++            D A
Sbjct: 123 SGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRA 182

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           ++  ++  C        G  VHG  ++     D++  ++L+  Y+K   L  +  +F+ +
Sbjct: 183 SLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSEL 242

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
            P  + VSW++MI+G            LFKEM  +    S S   ++  SC +  +L  G
Sbjct: 243 -PEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLG 301

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K +H   LK  F ++ I   A + MY  CG +  A  +L  +   S  S +N +IV   +
Sbjct: 302 KELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS-YNAIIVGYAR 360

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +    +A+K+F+ +  +     D +TL   ++AC ++    EG+ +HGLA+KS+   +  
Sbjct: 361 SDRGFQALKSFQ-LLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC 419

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLE 564
           V NA++ MYG+C+ +  AS +F+     +  +WN +I+A  QN  E   L  F    H  
Sbjct: 420 VANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR 479

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            EP++ +  S+L AC     L  G +IH  +   G   +SF+ +AL+DMY  C       
Sbjct: 480 MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKAD 539

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K+  +W+++IS +    +  +A + F  M   G+ P   +  ++L  C++  
Sbjct: 540 KIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLA 599

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
            V  G Q +  ++++     +++ ++C  +VDM  + G +Q++    +  P +     W 
Sbjct: 600 TVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFV-TWN 655

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           AML   +HHG   +G++  +L   ++  NV
Sbjct: 656 AMLCGYAHHG---LGEEALKLFESMQLVNV 682



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/617 (26%), Positives = 287/617 (46%), Gaps = 52/617 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++LL  Y+     + SL++F E   K+ V+W+AMI  CV+N   V GL  F
Sbjct: 211 GFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELF 270

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+    +    +  +   ++ L+ G+ +H  ++K+   +D  +    ++MYAKC
Sbjct: 271 KEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC 330

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++   S M      S+N I+ G   ++   + L  F+ +  +G   D ++LS A+
Sbjct: 331 GRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGAL 390

Query: 182 AASACL-GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            A A + G+L  G+ +H L +K        + V N+++ MY +C  +  A   F  M  +
Sbjct: 391 NACASIRGDLE-GRQVHGLAVK--SISMSNICVANAILDMYGKCKALAEASDLFDMMERR 447

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRS 299
           D VSWNAII     NG  EE   L H   ++ S +EPD  T  +++  CA    L  G  
Sbjct: 448 DAVSWNAIIAACEQNGNEEET--LAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGME 505

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H   I+  +G+D  +  +L+D Y K   + KA+ + +       +VSWN++ISG     
Sbjct: 506 IHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDR-TEQKTMVSWNAIISGFSLLQ 564

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F  ML +       T  A+L +C +  ++  GK IH   +K    ++    +
Sbjct: 565 QSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICS 624

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+ MY  CG++  +  + ++ + N D   WN ++     +G  +EA+K F+SM Q  N 
Sbjct: 625 TLVDMYSKCGNMQDSQLMFEK-APNRDFVTWNAMLCGYAHHGLGEEALKLFESM-QLVNV 682

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+  T V+V+ AC ++ L  +G     + L S  GLD + ++                 
Sbjct: 683 KPNHATFVSVLRACAHMGLVDKGLHYFDVML-SEYGLDPQSEH----------------- 724

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       ++CM+    ++     AL L + + FE + +   ++LS C   G +  
Sbjct: 725 ------------YSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEV 772

Query: 588 GKQIHGHVFHLGFQENS 604
            ++    +  L  Q++S
Sbjct: 773 AEKATRALLQLDPQDSS 789



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 192/445 (43%), Gaps = 63/445 (14%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR- 428
           T   I   C+   SL  GK  H   +  GF   T   N LM MYI C  L  A  +  + 
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 429 -----ISHNS------------------------DTSCWNIVIVACTQNGHFQEAIKTFK 459
                +S+NS                        D   WN VI    QNG  +++I  F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  +     D  +L  V+ ACG LE    G  +HGL +K     D    +AL+ MY +C
Sbjct: 171 EMG-RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSIL 576
           + +  + +VF      N  +W+ MI+   QN   V  LELF+ ++     +S     S+ 
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA--------------- 621
            +C  L  LR GK++H H     F  +  + +A LDMY+ C   A               
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +++++I  Y    +G++A++ F  +  +G+   + ++   L+AC+      EG Q +   
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG-- 407

Query: 682 LEEYDVRPETEHHVC----IVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHH 736
                V+  +  ++C    I+DM G+   L EA +    +  + +  V W A+++AC  +
Sbjct: 408 ---LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMM--ERRDAVSWNAIIAACEQN 462

Query: 737 GDTK--MGKQVAELLFKLEPENVGY 759
           G+ +  +    + +  ++EP++  Y
Sbjct: 463 GNEEETLAHFASMIHSRMEPDDFTY 487


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 230/801 (28%), Positives = 388/801 (48%), Gaps = 42/801 (5%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y   +    +L +F     K+V +W  M+ A  +N      L  F  M  EG R D    
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           +I + A      L  GR +H   + +G+ ++  + N  VNMY KC D+  +E  F GM  
Sbjct: 62  VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            D VSW  +++    N    + L     M   G + + V+  + V   A L  L  G+ I
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKI 181

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H   I  G E  P   + N+L+ MY  CG  +  +  F  M    V+ W  +I G + NG
Sbjct: 182 HHRIINEGLE--PDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           ++EE   +  +M L   V+ +  T ++++ +C +   ++EG  +    +        L+ 
Sbjct: 240 QYEEGLLVFRKMDL-EGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFS-- 369
            SL+  Y +   L +A+ L   +    D+V+WN+M++   +     E ++L  +      
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHMY-QRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGF 357

Query: 370 -----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAF 423
                T L++L +C + E+L  G+ IH   L  G     + V N+++ MY  CG   AA 
Sbjct: 358 GANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAM 417

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           S+ + +    D S WN VI A   N  FQ+A++ F  M + +    +  TL++++ ACG 
Sbjct: 418 SVFEAMPRKDDVS-WNAVINASVGNSKFQDALELFHGM-ELEGLRSNEFTLLSLLEACGG 475

Query: 484 LELAFEGKSLHGLALKSLMGLD-TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           LE     + +H  A     G + T V N+++ MY RC  +  A   F+S     L  W+ 
Sbjct: 476 LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSI 535

Query: 543 MISAFSQNK--AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           +++A++Q+K     RA + F+ +E E   P E++ VS L AC  +  L HG+ +H     
Sbjct: 536 ILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAA 595

Query: 598 LGFQENSFI-SSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIE 641
            GF E S +  + +++MY  C S +               +W+S+I AY ++G   EA+ 
Sbjct: 596 SGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALS 655

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
              EM   G  P   + +S+L   SH+GL++ G++++ + ++++ + P +    C+VD+L
Sbjct: 656 SLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLL 715

Query: 702 GRSGKLQEAYEFIKNLPI-QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
            R G L  A E I   P  Q     W  +L+AC  +GD + G + AE +F+LEP++ G +
Sbjct: 716 ARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSF 775

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           + L+N+Y ++GRW DA  I K
Sbjct: 776 VVLANLYASVGRWSDASRIRK 796



 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 190/655 (29%), Positives = 324/655 (49%), Gaps = 41/655 (6%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KC  +  +   F G+   +  SW  +M+    N +  + L  F  M W G + D V 
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              A+ A A  GEL +G+ IH+  +  G   +  + ++NSL++MY +C D+  AE+ F G
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGL--TSNIIISNSLVNMYGKCQDVPCAEKVFDG 118

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +DVVSW A++  +A NG + +A + L  M     V+P+  T VT++ +CA   LL  
Sbjct: 119 MLLRDVVSWTAMLAVYAQNGCWSQALECLSRMD-AEGVKPNQVTFVTIVDVCAKLRLLDL 177

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR +H   I   L  D ++ N+L+  Y    S    + +F+ +   + L+ W +MI+G  
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLL-WTTMIAGCS 236

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     +F++M     + +  T ++++  C + ++++ G+ I    L+  F ++T+
Sbjct: 237 QNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL 296

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +L+ +Y  CG L  A  LL+ + +  D   WN ++ AC QNG   EAI   + M   
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGDNWEAIHLLRRM-DM 354

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIK 523
           +    + VT ++V+ AC NLE   +G+ +H   L   L+  +  V N++ITMYG+C   +
Sbjct: 355 EGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTE 414

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACT 580
           +A +VFE+    +  +WN +I+A   N     ALELF  +E E    NE +++S+L AC 
Sbjct: 415 AAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACG 474

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSF-ISSALLDMYSNC---------------KSNAAWS 624
            L  L+  +QIH      GF  NS  + +++++MY+ C               K   AWS
Sbjct: 475 GLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWS 534

Query: 625 SMISAYGY--HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
            +++AY     G G  A + F EM   GI+P + + +S L AC+    ++ G   +    
Sbjct: 535 IILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAA 594

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
               V         I++M G+ G   +A      +P +     W +++ A +H+G
Sbjct: 595 ASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS-WNSLIVAYAHNG 648



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 212/800 (26%), Positives = 361/800 (45%), Gaps = 65/800 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++  S SL+  Y        +  +F     +DVV+W AM+    +N C    L   
Sbjct: 88  GLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECL 147

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ +  T + IV    ++  L  GR +H   I  G+  D  L N  V+MY  C
Sbjct: 148 SRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSC 207

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  +  +  FS M  +  + W T+++GC  N   E+ LL FR+M   G +A+ V+  S V
Sbjct: 208 GSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMV 267

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVT---NSLISMYSQCGDIEAAERAFWGMT 238
                L  +  G++I A  +     +SP+ S T    SLIS+Y QCG ++ A+     M 
Sbjct: 268 EVCRNLDAVKEGEMIDARIL-----ESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMY 322

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DVV+WNA++   A NG   EA  LL  M  M     +  T ++++  CA+   L +GR
Sbjct: 323 QRDVVAWNAMVTACAQNGDNWEAIHLLRRMD-MEGFGANKVTYLSVLEACANLEALSQGR 381

Query: 299 SVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
            +H   +   LL  ++ + NS++  Y K      A  +F A+ P  D VSWN++I+    
Sbjct: 382 EIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAM-PRKDDVSWNAVINASVG 440

Query: 355 --LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
              F++ L L              TLL++L +C   E L+  + IH      GF  N+  
Sbjct: 441 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 500

Query: 406 V-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ--NGHFQEAIKTFKSMT 462
           V N++++MY  CG L+ A      +      + W+I++ A  Q  +G  + A K F+ M 
Sbjct: 501 VGNSVVNMYARCGSLLDAKKAFDSLEEKGLVA-WSIILAAYAQSKDGPGRRAFKFFQEM- 558

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRD 521
           + +   P  VT V+ + AC  +     G+S+H  A  S  +     + N +I MYG+C  
Sbjct: 559 EAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGS 618

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
              A  VF+      L +WN +I A++ N   + AL   + +    F+P+  + VSIL  
Sbjct: 619 PSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG 678

Query: 579 CTQLGVLRHG-KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGW 637
            +  G+L  G +     +   G + +S     L+D             +++  G+     
Sbjct: 679 LSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVD-------------LLARKGFLDAAE 725

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVC 696
           E I     + +   +    + ++LL+AC   G    G++    + E   + P+ +   V 
Sbjct: 726 ELI-----LASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFE---LEPQHSGSFVV 777

Query: 697 IVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHH---GDTKMGK--QVAEL 748
           + ++    G+  +A    + ++ + ++ +PG     LS   H    G++K  K  ++ E 
Sbjct: 778 LANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICED 837

Query: 749 LFK--LEPENVGYYISLSNM 766
           L K  L     GY    +N+
Sbjct: 838 LEKLTLRMREAGYVPDTTNV 857


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 209/701 (29%), Positives = 346/701 (49%), Gaps = 40/701 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  Y+  GD++++   F GM   D VSWN ++SG       ++ +  F EM 
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  + +  + + + L ELS G  +HAL +K G E    V   ++L+ MY +C  
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRS 241

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTL 284
           ++ A   F+GM  ++ VSW A I G   N ++    +L  EMQ +     +P  A+    
Sbjct: 242 LDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA--- 298

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
              CA    L  GR +H +AI+     D ++  +++D Y+K+NSL+ A   F  + P + 
Sbjct: 299 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL-PNHT 357

Query: 345 LVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           + + N+M+ GL            F+ M+    +F   +L  +  +C   +    G+ +HC
Sbjct: 358 VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHC 417

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K GF  +    NA++ +Y  C  L+ A+ + Q +    D+  WN +I A  QNGH+ 
Sbjct: 418 LAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYD 476

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           + I  F  M +     PD  T  +V+ AC  L     G  +H   +KS +G D  V + +
Sbjct: 477 DTILHFNEMLRF-GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTV 535

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           + MY +C  I  A  + +      + +WN ++S FS NK    A + F  +     +P+ 
Sbjct: 536 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDH 595

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            +  ++L  C  L  +  GKQIHG +      ++ +ISS L+DMY+ C            
Sbjct: 596 FTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 655

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   +W++MI  Y  HG G EA+ +F  M    + P  ++ +++L ACSH GL D+G
Sbjct: 656 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 715

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +Y++ M   Y + P+ EH  C+VD+LGRS   QEA +FI ++P Q    +W  +LS C 
Sbjct: 716 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 775

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              D ++ +  A  +  L+P++   YI LSN+Y   G+W D
Sbjct: 776 IRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWAD 816



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 172/592 (29%), Positives = 287/592 (48%), Gaps = 21/592 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAYS+     +++ALF    + DVV+WNA+++   +       +  F EM   G+  
Sbjct: 130 TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 189

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +  L  G  VH L++K G+  D    +  V+MY KC  L+ + C F
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + VSW   ++GC+ N    + L  F EM   G      S +SA  + A +  L+
Sbjct: 250 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 309

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  IK  +     V    +++ +Y++   +  A RAF+G+    V + NA++ G
Sbjct: 310 TGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G   EA  L   M +  S+  D+ ++  + S CA++    +G+ VH  AI+     
Sbjct: 368 LVRAGLGIEAMGLFQFM-IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDV 426

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L            F EM
Sbjct: 427 DICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEM 485

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T  ++L +C +  SLE+G  +H   +K G  ++    + ++ MY  CG +
Sbjct: 486 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 545

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  RI      S WN ++   + N   +EA K F  M       PD  T   V+ 
Sbjct: 546 DEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEML-DMGLKPDHFTFATVLD 603

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C NL     GK +HG  +K  M  D  + + L+ MY +C D+  +  VFE     +  +
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 663

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           WN MI  ++ +   V AL +F  ++ E   PN  + V++L AC+ +G+   G
Sbjct: 664 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 715



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 279/612 (45%), Gaps = 74/612 (12%)

Query: 209 PYVSVTNSLISM-------------------------------YSQCGDIEAAERAFWGM 237
           P   V+N L+ M                               YS  GDI  A   F GM
Sbjct: 92  PTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGM 151

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              DVVSWNA++ G+   G F+E+ DL  EM   R V PD  T   L+  C+    L  G
Sbjct: 152 PDPDVVSWNALVSGYCQRGMFQESVDLFVEMA-RRGVSPDRTTFAVLLKSCSALEELSLG 210

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
             VH  A++  L  D+   ++L+D Y K  SL  A   F  + P  + VSW + I+G   
Sbjct: 211 VQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQ 269

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF EM  L    S  +  +   SC +   L  G+ +H   +K  FS++ + 
Sbjct: 270 NEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVV 329

Query: 406 VNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             A++ +Y     L  A  +     +H  +TS  N ++V   + G   EA+  F+ M  +
Sbjct: 330 GTAIVDVYAKANSLTDARRAFFGLPNHTVETS--NAMMVGLVRAGLGIEAMGLFQFMI-R 386

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +   D V+L  V SAC   +  F+G+ +H LA+KS   +D  V NA++ +YG+C+ +  
Sbjct: 387 SSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALME 446

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLEF--EPNEISIVSILSACTQ 581
           A  +F+     +  +WN +I+A  QN   +   L     L F  +P++ +  S+L AC  
Sbjct: 447 AYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 506

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L +G  +H  V   G   ++F++S ++DMY  C               +   +W+++
Sbjct: 507 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 566

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           +S +  + +  EA + F EM + G++P   +  ++L  C++   ++ G Q +  ++++  
Sbjct: 567 LSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEM 626

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQV 745
           +  E      +VDM  + G + ++    +   ++ +  V W AM+   + HG   +G + 
Sbjct: 627 LDDEYISST-LVDMYAKCGDMPDSLLVFEK--VEKRDFVSWNAMICGYALHG---LGVEA 680

Query: 746 AELLFKLEPENV 757
             +  +++ ENV
Sbjct: 681 LRMFERMQKENV 692



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 276/593 (46%), Gaps = 25/593 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    + T ++L+  Y      + +L  FY    ++ V+W A I  CV+N   V GL  F
Sbjct: 221 GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELF 280

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+     +      +   M+CL  GR +H  +IK    +D  +    V++YAK 
Sbjct: 281 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKA 340

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F G+      + N +M G +      + +  F+ M  S  + D VSLS   
Sbjct: 341 NSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVF 400

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A       G+ +H L IK G++    + V N+++ +Y +C  +  A   F GM  KD
Sbjct: 401 SACAETKGYFQGQQVHCLAIKSGFDVD--ICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 458

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSV 300
            VSWNAII     NG +++   +LH  +++R  ++PD  T  +++  CA    L  G  V
Sbjct: 459 SVSWNAIIAALEQNGHYDDT--ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+  LG D  + ++++D Y K   + +A+ L + I     +VSWN+++SG      
Sbjct: 517 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG-QQVVSWNAILSGFSLNKE 575

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F EML +  +    T   +L +C +  ++E GK IH   +K    ++    + 
Sbjct: 576 SEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST 635

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGD+  +  + +++    D   WN +I     +G   EA++ F+ M Q++N  
Sbjct: 636 LVDMYAKCGDMPDSLLVFEKV-EKRDFVSWNAMICGYALHGLGVEALRMFERM-QKENVV 693

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P+  T V V+ AC ++ L  +G     L + +   L+ ++++   ++ + GR +  + A 
Sbjct: 694 PNHATFVAVLRACSHVGLFDDGCRYFHL-MTTHYKLEPQLEHFACMVDILGRSKGPQEAV 752

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
               S  +  +   W  ++S    +   E+  L     L  +P++ S+  +LS
Sbjct: 753 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLS 805



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 56/218 (25%)

Query: 567 PNEISIVSILSACTQLG--VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           P  ++   +  +C Q G   L  G+  H  +   GF   +F+S+ LL MY+ C       
Sbjct: 55  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 114

Query: 618 --------KSNAAWSSMISAYGYHGK-----------------GW--------------E 638
                   +   +W++M++AY + G                   W              E
Sbjct: 115 RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 174

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHV 695
           +++LF EM   G+ P +++   LL +CS    +  G+Q +   ++   E DVR  +    
Sbjct: 175 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS---- 230

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            +VDM G+   L +A  F   +P +     WGA ++ C
Sbjct: 231 ALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGAAIAGC 267


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 220/798 (27%), Positives = 406/798 (50%), Gaps = 46/798 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   TSL+  Y      E +  +F +   +DVV+W +MI   V++   V  L  F
Sbjct: 133 GLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELF 192

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+  +  T    +SA   +  +  G+++H   ++ G  +D  +    VNMY KC
Sbjct: 193 HRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKC 252

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
           G L  +   F  M   +TVSWN I++ C  +    + L YF+ M   G    D V+  + 
Sbjct: 253 GSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITI 312

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +    L++G+++H   ++ GY+   ++ V N +++MYS CG I+ A   F  M  +
Sbjct: 313 LNACSSPATLTFGELLHECILQCGYD--THLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D +SWN II G A  G  +EA  L   M L   + PD  T +++I   A    ++E + +
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRM-LAEGITPDKFTFISIIDGTAR---MQEAKIL 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
               +   +  D+ ++++L++ +S+  ++ +A  LF+ +    D+V W S+IS   +   
Sbjct: 427 SELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKD-RDIVMWTSIISSYVQHGS 485

Query: 358 -EMLYLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            +    C++         +  TL+  L +C S  +L  GK IH   ++ GF+ +    NA
Sbjct: 486 SDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNA 545

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG L  A  +  +   N     WN +  A  Q   ++EA++ F+ M Q +   
Sbjct: 546 LINMYAKCGCLEEADRVFHQCGKN--LVSWNTIAAAYVQRDKWREALQLFQEM-QLEGLK 602

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D V+ V V++ C +   A EG+ +H + L++ M  D  V  AL+ MY   + +  AS +
Sbjct: 603 ADKVSFVTVLNGCSS---ASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA--CTQLG 583
           F      ++ +WN MI+  +++     A+++F+ ++ E   P++IS V++L+A   +   
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPS 719

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L+  + +   +   G++ ++ + +A++ M+                  +  A+W+ +++
Sbjct: 720 SLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVT 779

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           A+  HG+  +A++LF  M     RP   +++S+LSACSH GL++EG  ++ +M  E+ + 
Sbjct: 780 AHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIA 839

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
              EH+ C+VD+L R+G+L +A E ++ +P+     +W  +LSAC   GD K  K+V E 
Sbjct: 840 GSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGER 899

Query: 749 LFKLEPENVGYYISLSNM 766
           + +L+P     Y+ LS++
Sbjct: 900 VMELDPRRPAAYVVLSSV 917



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 195/720 (27%), Positives = 354/720 (49%), Gaps = 59/720 (8%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T L ++    + + + +GR VH     +    D  + N  ++MY KCG +  +   F  +
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
                VSWN++++    +   ++    F+ M   G   D ++  + +   + +G+LS GK
Sbjct: 64  DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           ++H   ++ G E +  V V  SLI MY +CG +E A R F  +  +DVVSW ++I  +  
Sbjct: 124 LLHGFVLEAGLERN--VMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQ 181

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           + +  EA +L H M+    V P+  T  T IS CA    + +G+ +H   +      D++
Sbjct: 182 HDRCVEALELFHRMR-PSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV 240

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS 369
           +  ++++ Y K  SL  A  +F  + P  + VSWN++++     G   E L+   +    
Sbjct: 241 VSCAIVNMYGKCGSLEDAREVFERM-PHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQ 299

Query: 370 --------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG--DL 419
                   T + IL +C+SP +L FG+ +H   L+ G+  + I  N +M MY +CG  D 
Sbjct: 300 GGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDN 359

Query: 420 VAAF--SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            AAF  ++++R     D   WN +I    Q G   EA+  F+ M   +  +PD  T +++
Sbjct: 360 AAAFFSTMVER-----DAISWNTIISGHAQAGFCDEAVHLFRRML-AEGITPDKFTFISI 413

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           I     ++   E K L  L ++S + LD  + +ALI M+ R  +++ A ++F+   + ++
Sbjct: 414 IDGTARMQ---EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDI 470

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
             W  +IS++ Q+ +   AL   R +  E    N+ ++V+ L+AC  L  L  GK IH H
Sbjct: 471 VMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAH 530

Query: 595 VFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAI 640
               GF  +  + +AL++MY+ C              K+  +W+++ +AY    K  EA+
Sbjct: 531 AIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGKNLVSWNTIAAAYVQRDKWREAL 590

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIV 698
           +LF EM   G++  K S +++L+ CS +    EG + +N +LE      E++H V   ++
Sbjct: 591 QLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGRKIHNILLE---TGMESDHIVSTALL 644

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           +M   S  L EA      +  +     W AM++  + HG   + ++  ++  +++ E V 
Sbjct: 645 NMYTASKSLDEASRIFSRMEFRDIVS-WNAMIAGKAEHG---LSREAIQMFQRMQLEGVA 700



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 197/776 (25%), Positives = 372/776 (47%), Gaps = 57/776 (7%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y      E ++++F    +   V+WN+++ A   +         F  M  +G+  D  T 
Sbjct: 47  YGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITF 106

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           + ++   + +  L +G+++H   ++AG+  +  +    + MY KCG +  +   F  +  
Sbjct: 107 VTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLAL 166

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            D VSW +++   + ++   + L  F  M  SG   + ++ ++A++A A +  ++ GK+I
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLI 226

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H+  ++ G+E    V V+ ++++MY +CG +E A   F  M   + VSWNAI+     +G
Sbjct: 227 HSQVLEDGFESD--VVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHG 284

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LL 314
              EA      MQL   + PD  T +T+++ C+    L  G  +H   ++   GYD  L+
Sbjct: 285 CCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQ--CGYDTHLI 342

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML-- 360
           + N +M  YS    +  A   F+ +    D +SWN++ISG            LF+ ML  
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVE-RDAISWNTIISGHAQAGFCDEAVHLFRRMLAE 401

Query: 361 -YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                +F+F +++      +    ++  K +    ++ G   +   V+AL++M+   G++
Sbjct: 402 GITPDKFTFISII------DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNV 455

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A SL   +  + D   W  +I +  Q+G   +A+   + M + +    +  TLV  ++
Sbjct: 456 REARSLFDDMK-DRDIVMWTSIISSYVQHGSSDDALGCTRLM-RLEGLMGNDFTLVTALN 513

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L    EGK +H  A++        V NALI MY +C  ++ A  VF  C   NL +
Sbjct: 514 ACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGK-NLVS 572

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN + +A+ Q      AL+LF+ ++ E    +++S V++L+ C+       G++IH  + 
Sbjct: 573 WNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGRKIHNILL 629

Query: 597 HLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIE 641
             G + +  +S+ALL+MY+  KS                 +W++MI+    HG   EAI+
Sbjct: 630 ETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQ 689

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVD-EGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +F  M   G+ P K S +++L+A S S     +  +    ++ +     +T     IV M
Sbjct: 690 MFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSM 749

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
            GRSG+L EA    + +  +     W  +++A + HG+    +Q  +L  +++ E+
Sbjct: 750 FGRSGRLAEARRAFERIR-ERDAASWNVIVTAHAQHGEV---EQALKLFRRMQQES 801



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G+        ++++ +        +   F     +D  +WN ++TA  ++  V   L  
Sbjct: 734 QGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKL 793

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI--KAGMIADSSLCNVFVNMY 118
           F  M +E  R DS TL+ ++SA +    +++G   H  S+  + G+          V++ 
Sbjct: 794 FRRMQQESSRPDSITLVSVLSACSHGGLIEEG-YHHFTSMGREFGIAGSQEHYGCVVDLL 852

Query: 119 AKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           A+ G L+ +E     M   A  V W T++S C
Sbjct: 853 ARAGRLDQAEELLRKMPVPASYVLWMTLLSAC 884


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 213/697 (30%), Positives = 344/697 (49%), Gaps = 42/697 (6%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGE 170
           N  +  Y   GD +++   F  M   D VSWNT++SG C H  +     L   EM   G 
Sbjct: 89  NTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSM-EMSRRGV 147

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
             D  +L+  + +   L +L+ G  IHAL +K G E    V   ++L+ MY +C  ++ A
Sbjct: 148 ALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETD--VRAGSALVDMYGKCRSLDDA 205

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLC 288
            R F GM  ++ VSW A I G   N ++    +L  +MQ +     +P  A+       C
Sbjct: 206 LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA---FRSC 262

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           A    L   R +H +AI+ +   D ++  +++D Y+K+ +L  A   F  + P +++ + 
Sbjct: 263 AAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGL-PHHNVETC 321

Query: 349 NSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N+M+ GL            F+ M      F   +L  +  +C   +    G  +HC  +K
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF  +    NA++ +Y  C  LV A+ + Q +    D+  WN +I A  QN  +++ I 
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR-DSVSWNAIIAALEQNECYEDTIA 440

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
               M +     PD  T  +V+ AC  L+    G  +HG A+KS +GLD  V + ++ MY
Sbjct: 441 HLNEMLRS-GMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMY 499

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIV 573
            +C  I  A  + +      L +WN +IS FS  K    A   F  +     +P+  +  
Sbjct: 500 CKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYA 559

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA------------ 621
           ++L  C  L  +  GKQIHG +       + +ISS L+DMY+ C +              
Sbjct: 560 TVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKL 619

Query: 622 ---AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
              +W++MI  Y  HG+G EA+E+F  M  + + P  ++ +++L ACSH GL+D+G QY+
Sbjct: 620 DFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYF 679

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           + M   Y + P+ EH  C+VD+LGRS   QEA EFI+++PI+    VW  +LS C    D
Sbjct: 680 HLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQD 739

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            ++ +  A  + +L+P++   YI LSN+Y   G+W D
Sbjct: 740 VEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVD 776



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 285/602 (47%), Gaps = 25/602 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAY +    +++ +LF    + DVV+WN +I+   ++      +    EM   G+  
Sbjct: 90  TMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVAL 149

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TTL +++ +   ++ L  G  +H L++K G+  D    +  V+MY KC  L+ +   F
Sbjct: 150 DRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFF 209

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   ++VSW   ++GC+ N    + +  F +M   G      + +SA  + A +  LS
Sbjct: 210 HGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLS 269

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + +HA  IK  +     V    +++ +Y++ G++  A RAF G+   +V + NA++ G
Sbjct: 270 TARQLHAHAIKNVFSSDRVVG--TAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVG 327

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G   EA  L   M     V  D+ ++  + S CA+     +G  VH  A++     
Sbjct: 328 LVRTGLGAEAMQLFQFMT-RSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDV 386

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L              EM
Sbjct: 387 DVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAHLNEM 445

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T  ++L +C   +SLE+G  +H   +K G   +    + ++ MY  CG +
Sbjct: 446 LRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAI 505

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  RI      S WN +I   +     +EA + F  M       PD  T   V+ 
Sbjct: 506 TEAQKLHDRIGGQELVS-WNSIISGFSLTKQSEEAQRFFSEML-DMGVKPDHFTYATVLD 563

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C NL     GK +HG  +K  M  D  + + L+ MY +C ++  +  +FE     +  +
Sbjct: 564 TCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVS 623

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN MI  ++ +   + ALE+F  ++     PN  + V++L AC+ +G+L  G Q     F
Sbjct: 624 WNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQY----F 679

Query: 597 HL 598
           HL
Sbjct: 680 HL 681



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 261/590 (44%), Gaps = 48/590 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   ++L+  Y      + +L  F+    ++ V+W A I  CV+N     G+  F
Sbjct: 181 GLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELF 240

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+            +   M CL   R +H  +IK    +D  +    V++YAK 
Sbjct: 241 VQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKA 300

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F G+   +  + N +M G +      + +  F+ M  SG   D +SLS   
Sbjct: 301 GNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVF 360

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +     G  +H L +K G++    V V N+++ +Y +C  +  A   F  M  +D
Sbjct: 361 SACAEVKGYFQGLQVHCLAVKSGFDVD--VCVRNAILDLYGKCKALVEAYLVFQEMEQRD 418

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNAII     N  +E+    L+EM L   +EPD  T  +++  CA    L  G  VH
Sbjct: 419 SVSWNAIIAALEQNECYEDTIAHLNEM-LRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G AI+  LG D  + ++++D Y K  ++++A+ L + I    +LVSWNS+ISG       
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG-QELVSWNSIISGFSLTKQS 536

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F EML +  +    T   +L +C +  ++E GK IH   +K     +    + L
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 596

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++  +  + ++ +   D   WN +I     +G   EA++ F+ M Q+ N  P
Sbjct: 597 VDMYAKCGNMPDSLLMFEK-ARKLDFVSWNAMICGYALHGQGLEALEMFERM-QRANVVP 654

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +  T V V+ AC ++ L  +G     L                  M  R + +       
Sbjct: 655 NHATFVAVLRACSHVGLLDDGCQYFHL------------------MTSRYKLVP------ 690

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                  L  + CM+    ++K    ALE  R +  E + +   ++LS C
Sbjct: 691 ------QLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSIC 734


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 232/726 (31%), Positives = 363/726 (50%), Gaps = 47/726 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QG+ +H L +K+ + A   L    V MY KCG L  +   F  M      SWN +M  
Sbjct: 62  LPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGA 119

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + +    + +  +++M   G   D  +  S + A   LGE   G  IH + +K GY + 
Sbjct: 120 FVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGE- 178

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            +V V N+LI+MY +CGD+  A   F G  M  +D VSWN+II      G   EA  L  
Sbjct: 179 -FVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFR 237

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            MQ +  V  +  T V  +    D   ++ G  +HG  ++     D+ + N+L+  Y+K 
Sbjct: 238 RMQEV-GVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKC 296

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAI 374
             +  A  +F ++    D VSWN+++SGL +  LY  +   F             ++L +
Sbjct: 297 GRMEDAGRVFESML-CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNL 355

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISH 431
           + +     +L  GK +H + ++ G  +N    N L+ MY  C     +  AF  +    H
Sbjct: 356 IAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECM----H 411

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             D   W  +I    QN    EAI  F+ + Q +    D + + +V+ AC  L+     +
Sbjct: 412 EKDLISWTTIIAGYAQNEFHLEAINLFRKV-QVKGMDVDPMMIGSVLRACSGLKSRNFIR 470

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +HG   K  +  D  +QNA++ +YG    I  A   FES  + ++ +W  MI+    N 
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNG 529

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             V ALELF  L+    +P+ I+I+S LSA   L  L+ GK+IHG +   GF     I+S
Sbjct: 530 LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS 589

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L+DMY+ C               +    W+SMI+A G HG G +AI LF +M +  + P
Sbjct: 590 SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIP 649

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + ++LL ACSHSGL+ EG +++  M   Y + P  EH+ C+VD+L RS  L+EAY F
Sbjct: 650 DHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHF 709

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           ++N+PI+P   +W A+L AC  H + ++G+  A+ L + + EN G Y  +SN++ A GRW
Sbjct: 710 VRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRW 769

Query: 774 KDAVEI 779
            D  E+
Sbjct: 770 NDVEEV 775



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 238/471 (50%), Gaps = 19/471 (4%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +D V+WN++I+A V     +  L  F  M E G+  ++ T +  +  +   + +K G  
Sbjct: 210 KEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMG 269

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K+   AD  + N  + MYAKCG +  +   F  M C D VSWNT++SG + N  
Sbjct: 270 IHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNEL 329

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               L YFR+M  SG++ D VS+ + +AAS   G L  GK +HA  I+ G + +  + + 
Sbjct: 330 YSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSN--MQIG 387

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MY++C  ++    AF  M  KD++SW  II G+A N    EA +L  ++Q+ + +
Sbjct: 388 NTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQV-KGM 446

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D   + +++  C+        R +HGY  +R L  D+++ N++++ Y +   +  A  
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARR 505

Query: 335 LFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPE 382
            F +I    D+VSW SMI+     GL  E L L      +        +++ L +  +  
Sbjct: 506 AFESIRS-KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLS 564

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           SL+ GK IH + ++ GF       ++L+ MY  CG +  +  +   +    D   W  +I
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMI 623

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            A   +G   +AI  FK MT  QN  PD +T + ++ AC +  L  EGK  
Sbjct: 624 NANGMHGCGNKAIALFKKMT-DQNVIPDHITFLALLYACSHSGLMVEGKRF 673



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 201/397 (50%), Gaps = 17/397 (4%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
            A +  + +L+  Y+     E +  +F     +D V+WN +++  V+N      L++F +
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRD 339

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   G + D  ++L +++A  +   L +G+ VH  +I+ G+ ++  + N  V+MYAKC  
Sbjct: 340 MQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCC 399

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +      F  MH  D +SW TI++G   N +  + +  FR++   G   D + + S + A
Sbjct: 400 VKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + L   ++ + IH    K    D   + + N+++++Y + G I+ A RAF  +  KD+V
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDLAD---IMLQNAIVNVYGEVGHIDYARRAFESIRSKDIV 516

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW ++I     NG   EA +L + ++   +++PD   +++ +S  A+   L++G+ +HG+
Sbjct: 517 SWTSMITCCVHNGLPVEALELFYSLK-QTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
            IR+    +  + +SL+D Y+   ++  +  +F+++    DL+ W SMI+          
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNK 634

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
              LFK+M          T LA+L +C+    +  GK
Sbjct: 635 AIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 111/237 (46%), Gaps = 1/237 (0%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           LA +    +++  Y  V + + +   F    +KD+V+W +MIT CV N   V  L  F  
Sbjct: 481 LADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           + +  I+ DS  ++  +SA   ++ LK+G+ +H   I+ G   +  + +  V+MYA CG 
Sbjct: 541 LKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGT 600

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           + +S   F  +   D + W ++++    +    K +  F++M       D+++  + + A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYA 660

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +  G +  GK    + +K GY+  P+      ++ + S+   +E A      M  K
Sbjct: 661 CSHSGLMVEGKRFFEI-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIK 716



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/93 (23%), Positives = 46/93 (49%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF    P ++SL+  Y+     E+S  +F+    +D++ W +MI A   + C    +  
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIAL 638

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           F +M ++ +  D  T L ++ A +    + +G+
Sbjct: 639 FKKMTDQNVIPDHITFLALLYACSHSGLMVEGK 671


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 224/741 (30%), Positives = 380/741 (51%), Gaps = 42/741 (5%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  +  M  EG+R DS T +  + A T    L  GR VH    ++G+  D    N  +NM
Sbjct: 3   LELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALINM 62

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVS 176
           Y KC     +   FS M   + VSW +++     + +   + +L FR+M   G + + ++
Sbjct: 63  YGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLIT 122

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + + +   AC   L+ G+ +H   ++ G   S   S+ N+L+ MY + GD++ A+     
Sbjct: 123 MVAVL--RAC--NLTDGRQVHGYVLEAGM--SLDTSLGNALVDMYCKTGDVDEADLVLRE 176

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +DV+SWN +I G+A +G  +E    L  MQ    + P   T  TL++ C+    L E
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQ-QDGLSPTKVTYATLLNACSSGEDLGE 235

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
           G+S+H   +   L  D ++ + L+  Y K  SL   +     +   N  ++WN++I    
Sbjct: 236 GKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERN-TIAWNTIIGAYA 294

Query: 356 -----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                      F++M     +    T + +L +C+SP  L  G  +H W  +LGF  + I
Sbjct: 295 RYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF-ESII 353

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             N+L  MY  CG L AA  + + +   +  S WN +I A  Q+G + +A K F+ M + 
Sbjct: 354 VHNSLTAMYAKCGSLDAARKMFEGMPSRNSVS-WNSLISAAIQHGCYADAHKFFQRM-KL 411

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           + + PD VT ++++ AC     A EG S+H + ++S     T V NALI MY +  D ++
Sbjct: 412 EGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEA 471

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL-G 583
           A  VF++    N  +WN +++A+ +      A+E+F  ++   ++++ V+ L AC+ L G
Sbjct: 472 ARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMDVARDKVTYVAALDACSGLAG 531

Query: 584 VLRHGKQIHGHVFHLGFQE--NSFISSALLDMYSNC---------------KSNAAWSSM 626
            L HGK IHG++   GF    ++  ++AL++MY  C               +    W+S+
Sbjct: 532 GLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSL 591

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I AY  H +  +A++L   M   G++      +S+LS C HSGL++EG +Y+ +M+++Y 
Sbjct: 592 IVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYG 651

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P  EH+ CI+D+LGR+G L  A + +  LP +    VW  +L+AC  HG+ + GK+ A
Sbjct: 652 ISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNPERGKRAA 711

Query: 747 ELLFKLEPENVGYYISLSNMY 767
             +  L+P     Y+ LSN+Y
Sbjct: 712 RRITLLDPSIPAAYVVLSNIY 732



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 175/633 (27%), Positives = 310/633 (48%), Gaps = 62/633 (9%)

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           + L  ++ M   G + D+V+  + + A    G L  G+ +HA   + G E   Y +  N+
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAA--NA 58

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           LI+MY +C   E A + F  M   +VVSW ++I  FA  G       LL     +  + P
Sbjct: 59  LINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRP 118

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           ++ T+V ++  C     L +GR VHGY +   +  D  + N+L+D Y K+  + +A+L+ 
Sbjct: 119 NLITMVAVLRACN----LTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVL 174

Query: 337 NAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESL 384
             + P  D++SWN MISG  +          L+   Q   S    T   +L +C+S E L
Sbjct: 175 REM-PKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDL 233

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS---HNSDTSCWNIV 441
             GKSIH   + +G   + +  + L+ MY  CG L      ++R S   H  +T  WN +
Sbjct: 234 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSL----EDVKRSSCEVHERNTIAWNTI 289

Query: 442 IVACTQ-NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG----L 496
           I A  + + HFQ A+++F+ M Q Q    D+VT V ++  C +     +G  LH     L
Sbjct: 290 IGAYARYSDHFQ-ALRSFQQM-QLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQL 347

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +S++     V N+L  MY +C  + +A  +FE   + N  +WN +ISA  Q+     A
Sbjct: 348 GFESII-----VHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADA 402

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
            + F+ ++ E   P+E++ +S+L ACT+    + G  IH  V   GF + + +++AL+ M
Sbjct: 403 HKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFM 462

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+                 ++  +W+++++AY   G   +A+E+F +M    +   K + 
Sbjct: 463 YAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTY 519

Query: 659 ISLLSACSH-SGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           ++ L ACS  +G +  G   +  ML+  +  R +T     +V+M G+ G LQEA +    
Sbjct: 520 VAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDE 579

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
           + +      W +++ A + H + +   ++ +++
Sbjct: 580 M-LHRDVVTWTSLIVAYAQHSEIEQALKLVKIM 611



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 254/521 (48%), Gaps = 22/521 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y      + +  +  E   +DV++WN MI+   ++     GL     M ++G+  
Sbjct: 156 ALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSP 215

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T   +++A +    L +G+ +H   +  G+  D  + +  + MY KCG L   + + 
Sbjct: 216 TKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSS 275

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +H  +T++WNTI+      +   + L  F++M   G +AD V+    +   +    L+
Sbjct: 276 CEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLA 335

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G ++H    +LG+E    + V NSL +MY++CG ++AA + F GM  ++ VSWN++I  
Sbjct: 336 QGILLHDWISQLGFES---IIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISA 392

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G + +A      M+L  S  PD  T ++++  C      +EG S+H   +      
Sbjct: 393 AIQHGCYADAHKFFQRMKLEGS-RPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDK 451

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF 366
              + N+L+  Y+K      A  +F+A+A  N  VSWN++++     GL ++ + +  + 
Sbjct: 452 RTGVANALIFMYAKLGDHEAARNVFDAMAERN-TVSWNTILAAYVEKGLNRDAVEMFWKM 510

Query: 367 SFS----TLLAILPSCNS-PESLEFGKSIHCWQLKLGFSN--NTIGVNALMHMYINCGDL 419
             +    T +A L +C+     L  GK IH + L  GFSN  +T+   AL++MY  CG L
Sbjct: 511 DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSL 570

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   + H  D   W  +IVA  Q+   ++A+K  K M +Q     D V  ++++S
Sbjct: 571 QEARKIFDEMLHR-DVVTWTSLIVAYAQHSEIEQALKLVKIM-EQDGVKVDDVVFLSILS 628

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGR 518
            C +  L  EG   + +++    G+  R++  N +I + GR
Sbjct: 629 GCDHSGLLEEG-CKYFVSMIDDYGISPRLEHYNCIIDVLGR 668



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 175/350 (50%), Gaps = 18/350 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL   Y+     +++  +F    +++ V+WN++I+A +++ C      FF  M  EG R 
Sbjct: 357 SLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRP 416

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + ++ A T+    K+G  +H + +++G    + + N  + MYAK GD  ++   F
Sbjct: 417 DEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVF 476

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAA-SACLGE 189
             M   +TVSWNTI++  +        +    EM W  + A D V+  +A+ A S   G 
Sbjct: 477 DAMAERNTVSWNTILAAYVEKGLNRDAV----EMFWKMDVARDKVTYVAALDACSGLAGG 532

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L++GK+IH   +  G+ +        +L++MY +CG ++ A + F  M  +DVV+W ++I
Sbjct: 533 LAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSLI 592

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGYA 304
             +A + + E+A  L+  M+    V+ D    ++++S C  S LL EG       +  Y 
Sbjct: 593 VAYAQHSEIEQALKLVKIME-QDGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYG 651

Query: 305 IR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           I  RL  Y     N ++D   ++  L  AE L + +   +D   W ++++
Sbjct: 652 ISPRLEHY-----NCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLA 696



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 163/373 (43%), Gaps = 61/373 (16%)

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +A++ +K M Q +   PDSVT V  + AC       +G+ +H    +S +  D    NAL
Sbjct: 1   QALELYKRM-QLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANAL 59

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR-ALELFRHLEFE---PN 568
           I MYG+CR  + A  +F    + N+ +W  +I  F+Q     R ++ LFR +E E   PN
Sbjct: 60  INMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPN 119

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA------- 621
            I++V++L AC     L  G+Q+HG+V   G   ++ + +AL+DMY  CK+         
Sbjct: 120 LITMVAVLRACN----LTDGRQVHGYVLEAGMSLDTSLGNALVDMY--CKTGDVDEADLV 173

Query: 622 ----------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS----- 666
                     +W+ MIS Y   G   E +     M   G+ PTK +  +LL+ACS     
Sbjct: 174 LREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDL 233

Query: 667 ------HSGLVDEGLQY-----------YNNMLEEYDV-RPETEHH----VCIVDMLGRS 704
                 H  +VD GL             Y       DV R   E H    +    ++G  
Sbjct: 234 GEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAY 293

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGA------MLSACSHHGDTKMGKQVAELLFKLEPENVG 758
            +  + ++ +++       GV         ML  CS       G  + + + +L  E++ 
Sbjct: 294 ARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESII 353

Query: 759 YYISLSNMYVALG 771
            + SL+ MY   G
Sbjct: 354 VHNSLTAMYAKCG 366



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/294 (21%), Positives = 120/294 (40%), Gaps = 21/294 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      + +L+  Y+ +   E++  +F     ++ V+WN ++ A VE       +  F
Sbjct: 448 GFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMF 507

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGM--IADSSLCNVFVNMY 118
            +M    +  D  T +  + A + +   L  G+++H   +  G     D+      VNMY
Sbjct: 508 WKM---DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMY 564

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            KCG L  +   F  M   D V+W +++     ++  E+ L   + M   G + D+V   
Sbjct: 565 GKCGSLQEARKIFDEMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFL 624

Query: 179 SAVAASACLGELSYG-----KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           S ++     G L  G      +I   GI      SP +   N +I +  + G ++ AE+ 
Sbjct: 625 SILSGCDHSGLLEEGCKYFVSMIDDYGI------SPRLEHYNCIIDVLGRAGHLDLAEKL 678

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              +  + D   W  ++    ++G  E        + L+   +P I     ++S
Sbjct: 679 VDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLL---DPSIPAAYVVLS 729


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 361/720 (50%), Gaps = 36/720 (5%)

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
           +Q R +H   +  GM    +L +  + MY  C         F  +    ++ WN ++ G 
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
                 +  L++F  M  S    D  +    + A   L  +   K++H L   +G+    
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           ++   +SLI +Y+  G I  A+  F  +  +D + WN +++G+  NG F  A     EM+
Sbjct: 213 FIG--SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               V+P+  + V L+S+CA   ++R G  +HG  IR     D  + N+++  YSK  +L
Sbjct: 271 -NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNL 329

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A  +F+ I P  D V+WN +I+G            LFK M+    +    T  + LPS
Sbjct: 330 FDARKIFD-IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPS 388

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                SL++ K +H + ++ G   +    +AL+ +Y   GD+  A    Q+ +   D + 
Sbjct: 389 VLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ-NTLVDVAV 447

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
              +I     NG   EA+  F+ + Q+    P+ +T+ +V+ AC  L     GK LH   
Sbjct: 448 CTAMISGYVLNGLNVEALNLFRWLIQE-GMVPNCLTMASVLPACAALASLKLGKELHCDI 506

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           LK  +    +V +++  MY +   +  A   F      +   WN MI +FSQN     A+
Sbjct: 507 LKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAI 566

Query: 558 ELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LFR +     +   VS+   LSAC     L +GK++H  V    F  ++F++S L+DMY
Sbjct: 567 DLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMY 626

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C               K+  +W+S+I+AYG HG+  E ++LFHEM  +GI+P   + +
Sbjct: 627 SKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFL 686

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            ++SAC H+GLVDEG+ Y+  M EEY +    EH  C+VD+ GR+G+L EA++ IK++P 
Sbjct: 687 VIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPF 746

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            P  G WG++L AC  HG+ ++ K  ++ L +L+P N GYY+ LSN++   G W+  +++
Sbjct: 747 TPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKV 806



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 175/649 (26%), Positives = 301/649 (46%), Gaps = 39/649 (6%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
           + WN +I       C    L FF  M+   +  D  T   ++ A   +N +   ++VH L
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
           +   G   D  + +  + +Y   G ++ ++  F  +   D + WN +++G + N      
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L  F+EM  S  + ++VS    ++  A  G +  G  +H L I+ G+E  P  +V N++I
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDP--TVANTII 320

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           +MYS+CG++  A + F  M   D V+WN +I G+  NG  +EA  L   M +   V+ D 
Sbjct: 321 TMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAM-VTSGVKLDS 379

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T  + +     S  L+  + VH Y +R  + +D+ + ++L+D Y K   +  A   F  
Sbjct: 380 ITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQ 439

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
              + D+    +MISG            LF+ ++      +  T+ ++LP+C +  SL+ 
Sbjct: 440 -NTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKL 498

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK +HC  LK G  N     +++ +MY   G L  A+   +R+    D+ CWN++IV+ +
Sbjct: 499 GKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP-VKDSVCWNLMIVSFS 557

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           QNG  + AI  F+ M        DSV+L   +SAC N    + GK LH   +++    DT
Sbjct: 558 QNGKPELAIDLFRQMG-TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDT 616

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
            V + LI MY +C  +  A +VF+     N  +WN +I+A+  +      L+LF  +   
Sbjct: 617 FVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA 676

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
             +P+ ++ + I+SAC   G++                E  +    + + Y  C     +
Sbjct: 677 GIQPDHVTFLVIMSACGHAGLV---------------DEGIYYFRCMTEEYGICARMEHF 721

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
           + M+  YG  G+  EA +    M      P   +  SLL AC   G V+
Sbjct: 722 ACMVDLYGRAGRLHEAFDTIKSM---PFTPDAGTWGSLLGACRLHGNVE 767



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 287/592 (48%), Gaps = 23/592 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   +SL+  Y++  Y   +  LF E   +D + WN M+   V+N      L  F
Sbjct: 207 GFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTF 266

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    ++ +S + + ++S       ++ G  +H L I++G  +D ++ N  + MY+KC
Sbjct: 267 QEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKC 326

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F  M   DTV+WN +++G + N + ++ +  F+ M  SG + D+++ +S +
Sbjct: 327 GNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFL 386

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +    G L Y K +H+  ++ G     Y+   ++L+ +Y + GD+E A + F   T  D
Sbjct: 387 PSVLKSGSLKYCKEVHSYIVRHGVPFDVYLK--SALVDIYFKGGDVEMACKTFQQNTLVD 444

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V    A+I G+ LNG   EA +L   + +   + P+  T+ +++  CA    L+ G+ +H
Sbjct: 445 VAVCTAMISGYVLNGLNVEALNLFRWL-IQEGMVPNCLTMASVLPACAALASLKLGKELH 503

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              +++ L     + +S+   Y+KS  L  A   F  + P+ D V WN MI         
Sbjct: 504 CDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRM-PVKDSVCWNLMIVSFSQNGKP 562

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M    ++F   +L A L +C +  +L +GK +HC+ ++  F ++T   + L
Sbjct: 563 ELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTL 622

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A S+   +   ++ S WN +I A   +G  +E +  F  M  +    P
Sbjct: 623 IDMYSKCGKLALARSVFDMMDWKNEVS-WNSIIAAYGNHGRPRECLDLFHEMV-EAGIQP 680

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-S 526
           D VT + ++SACG+  L  EG   +   +    G+  R+++   ++ +YGR   +  A  
Sbjct: 681 DHVTFLVIMSACGHAGLVDEG-IYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFD 739

Query: 527 TVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           T+    +  +  TW  ++ A       E+  L     +E +PN      +LS
Sbjct: 740 TIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLS 791


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 225/734 (30%), Positives = 377/734 (51%), Gaps = 38/734 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I  AL+  + L + R +H L I  G+          ++ Y+      SS   F  +  A 
Sbjct: 10  ISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAK 69

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN+I+     N +  K L ++ ++  S    D  +  S + A A L +   G +++
Sbjct: 70  NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              +++G+E   YV   N+L+ MYS+ G +  A + F  M  +D+VSWN++I G++ +G 
Sbjct: 130 KQILEMGFESDLYVG--NALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGY 187

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           +EEA ++ HE++    + PD  TV +++   A+ L++++G+ +HG+ ++  +    ++ N
Sbjct: 188 YEEALEIYHELR-NSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNN 246

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-EM------LYLCSQFSFS- 369
            L+  Y K +  + A  +F+ +  + D V++N+MI G  K EM      ++L +   F  
Sbjct: 247 GLLAMYLKFSRPTDARRVFDEMV-VRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKP 305

Query: 370 ---TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T+ ++L +C     L   K I+ + L+ GF   +   N L+ +Y  CGD++ A  + 
Sbjct: 306 DILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVF 365

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL-E 485
             +    DT  WN +I    Q+G   EA+K FK M   +  + D +T + +IS    L +
Sbjct: 366 NSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISLSTRLAD 423

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L F GK LH   +KS + +D  V NALI MY +C ++  +  +F S    +  TWN +IS
Sbjct: 424 LKF-GKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVIS 482

Query: 546 A---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A   F      ++     R  +  P+  + +  L  C  L   R GK+IH  +   G++ 
Sbjct: 483 ACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
              I +AL++MYS C               +    W+ MI AYG +G+G +A+E F +M 
Sbjct: 543 ELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDME 602

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
            SGI P     I+L+ ACSHSGLV++GL  +  M   Y + P  EH+ C+VD+L RS K+
Sbjct: 603 KSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            +A EFI+ +PI+P   +W ++L AC   GD +  ++V+  + +L P++ GY I  SN Y
Sbjct: 663 SKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722

Query: 768 VALGRWKDAVEIGK 781
            AL +W     I K
Sbjct: 723 AALRKWDKVSLIRK 736



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 283/595 (47%), Gaps = 23/595 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L+  YS+     SSL++F      K+V  WN++I A  +N      L F+G++ E  
Sbjct: 42  SGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESK 101

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  T   ++ A   +   + G +V+   ++ G  +D  + N  V+MY++ G L+ + 
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRAR 161

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSWN+++SG   + Y E+ L  + E+  S    D+ ++SS + A A L 
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLL 221

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G+ +H   +K G      V+  N L++MY +      A R F  M  +D V++N +
Sbjct: 222 VVKQGQGLHGFTLKSGVNSVSVVN--NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTM 279

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+      EE+  +   ++ +   +PDI TV +++  C     L   + ++ Y +R  
Sbjct: 280 ICGYLKLEMVEESVKMF--LENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAG 337

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              +  + N L+D Y+K   +  A  +FN++    D VSWNS+ISG            LF
Sbjct: 338 FVLESTVKNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDLMEAMKLF 396

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K M+ +  Q    T L ++        L+FGK +H   +K G   +    NAL+ MY  C
Sbjct: 397 KMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKC 456

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++  +  +   +    DT  WN VI AC + G F   ++    M ++    PD  T + 
Sbjct: 457 GEVGDSLKIFNSMG-TLDTVTWNTVISACVRFGDFATGLQVTTQM-RKNKVVPDMATFLV 514

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            +  C +L     GK +H   L+     + ++ NALI MY +C  ++S+  VFE     +
Sbjct: 515 TLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRD 574

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           + TW  MI A+       +ALE F  +E     P+ +  ++++ AC+  G++  G
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKG 629



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 287/616 (46%), Gaps = 49/616 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  YS +     +  +F E   +D+V+WN++I+    +      L  +
Sbjct: 136 GFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E+    I  DS T+  ++ A   +  +KQG+ +H  ++K+G+ + S + N  + MY K 
Sbjct: 196 HELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKF 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                +   F  M   D+V++NT++ G L     E+ +  F E      + D ++++S +
Sbjct: 256 SRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVL 314

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L +LS  K I+   ++ G+      +V N LI +Y++CGD+  A   F  M CKD
Sbjct: 315 CACGHLRDLSLAKYIYNYMLRAGFVLES--TVKNILIDVYAKCGDMITARDVFNSMECKD 372

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN+II G+  +G   EA  L   M +M   + D  T + LISL      L+ G+ +H
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISLSTRLADLKFGKGLH 431

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
              I+  +  DL + N+L+D Y+K   +  +  +FN++  + D V+WN++IS     G F
Sbjct: 432 SNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTL-DTVTWNTVISACVRFGDF 490

Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
              L + +Q          +T L  LP C S  +   GK IHC  L+ G+ +     NAL
Sbjct: 491 ATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L ++F + +R+S   D   W  +I A    G  ++A+++F  M ++    P
Sbjct: 551 IEMYSKCGCLESSFRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALESFVDM-EKSGIVP 608

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV  + +I AC +      G    GLA    M    ++ + +I  Y             
Sbjct: 609 DSVVFIALIYACSH-----SGLVEKGLACFEKMKTHYKI-DPMIEHYA------------ 650

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                       C++   S+++   +A E  + +  EP+     S+L AC   G +   +
Sbjct: 651 ------------CVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAE 698

Query: 590 QIHGHVFHLGFQENSF 605
           ++   +  L   +  +
Sbjct: 699 RVSRRIIELNPDDPGY 714


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 229/782 (29%), Positives = 388/782 (49%), Gaps = 42/782 (5%)

Query: 31  YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLK 90
           Y+       T++ +   C + + +  G      M+     F  T  + + + L QM  +K
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMIL--TEFKPT--VFVTNCLIQMY-IK 89

Query: 91  QGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
              +     +  GM   D+   N  +  YA  GD+  ++  F  M   D VSWN+++SG 
Sbjct: 90  CSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGY 149

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           LHN    K +  F +MG  G   D  + +  + + + L +   G  IH L +K+G++   
Sbjct: 150 LHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCD- 208

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            V   ++L+ MY++C  ++ + + F  M  K+ VSW+AII G   N       +L  EMQ
Sbjct: 209 -VVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               V    +T  ++   CA    LR G  +HG+A++   G D+++  + +D Y K N+L
Sbjct: 268 -KAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNL 326

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLFKE--------MLYLCSQFSFS----TLLAILPS 377
           S A+ LFN++ P ++L S+N++I G  +         M  L  +        +L     +
Sbjct: 327 SDAQKLFNSL-PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRA 385

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C   +    G  +H   +K    +N    NA++ MY  CG LV A  + + +  + D   
Sbjct: 386 CAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV-SRDAVS 444

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I A  QNG+ ++ +  F  M Q     PD  T  +V+ AC   +    G  +H   
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQS-GMEPDEFTYGSVLKACAGWQALNCGMEIHNRI 503

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +KS +GLD+ V  ALI MY +C  ++ A  + +      + +WN +IS FS  K    A 
Sbjct: 504 IKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQ 563

Query: 558 ELF-RHLEF--EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           + F + LE   +P+  +  +IL  C  L  +  GKQIH  +     Q +++ISS L+DMY
Sbjct: 564 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMY 623

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C               +    W++M+  Y  HG G EA+++F  M    ++P  ++ +
Sbjct: 624 SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFL 683

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           ++L AC H GLV++GL Y+++ML  Y + P+ EH+ C+VD++GRSG++ +A E I+ +P 
Sbjct: 684 AVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 743

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +    +W  +LS C  HG+ ++ ++ A  + +LEPE+   Y+ LSN+Y   G W +  ++
Sbjct: 744 EADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKL 803

Query: 780 GK 781
            K
Sbjct: 804 RK 805



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 188/737 (25%), Positives = 342/737 (46%), Gaps = 56/737 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L  Y+       +  LF     +DVV+WN++I+  + N      +  F +M   G  F
Sbjct: 113 AMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVF 172

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +     G  +H L++K G   D    +  ++MYAKC  L+ S   F
Sbjct: 173 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFF 232

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW+ I++GC+ N+     L  F+EM  +G      + +S   + A L  L 
Sbjct: 233 HSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALR 292

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   +K  +     V +  + + MY +C ++  A++ F  +   ++ S+NAII G
Sbjct: 293 LGSQLHGHALKTDFGTD--VVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVG 350

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A + K  EA  +   +Q    +  D  ++      CA      EG  VHG +++ L   
Sbjct: 351 YARSDKGIEALGMFRLLQ-KSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQS 409

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ + N+++D Y K  +L +A L+F  +    D VSWN++I+             LF  M
Sbjct: 410 NICVANAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLFVWM 468

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNALMHMYINCG 417
           L    +    T  ++L +C   ++L  G  IH   +K  LG  ++ +G+ AL+ MY  CG
Sbjct: 469 LQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL-DSFVGI-ALIDMYSKCG 526

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  L  R++  +  S WN +I   +     +EA KTF  M  +    PD+ T   +
Sbjct: 527 MMEKAEKLHDRLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKML-EMGVDPDNFTYATI 584

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C NL     GK +H   +K  +  D  + + L+ MY +C +++    +FE   N + 
Sbjct: 585 LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 644

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            TWN M+  ++Q+     AL++F +++ E   PN  + +++L AC  +G++  G     H
Sbjct: 645 VTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL----H 700

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
            FH           ++L  Y        +S ++   G  G+  +A+EL   M      P 
Sbjct: 701 YFH-----------SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM------PF 743

Query: 655 KSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEA 710
           ++  +   +LLS C   G V+   +   ++L+   + PE +  +V + ++   +G   E 
Sbjct: 744 EADAVIWRTLLSICKIHGNVEVAEKAAYSILQ---LEPEDSAAYVLLSNIYANAGMWNEV 800

Query: 711 YEFIKNLP---IQPKPG 724
            +  K +    ++ +PG
Sbjct: 801 TKLRKMMRFNGLKKEPG 817



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 286/593 (48%), Gaps = 25/593 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++LL  Y+     + S+  F+    K+ V+W+A+I  CV+N  +  GL  F
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + G+    +T   +  +   ++ L+ G  +H  ++K     D  +    ++MY KC
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L+ ++  F+ +   +  S+N I+ G   ++   + L  FR +  SG   D VSLS A 
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +     G  +H L +K   + +  + V N+++ MY +CG +  A   F  M  +D
Sbjct: 384 RACAVIKGDLEGLQVHGLSMKSLCQSN--ICVANAILDMYGKCGALVEACLVFEEMVSRD 441

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNAII     NG  E+   L   M L   +EPD  T  +++  CA    L  G  +H
Sbjct: 442 AVSWNAIIAAHEQNGNEEKTLSLFVWM-LQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 500

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
              I+  LG D  +  +L+D YSK   + KAE L + +A    +VSWN++ISG   +   
Sbjct: 501 NRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT-VVSWNAIISGFSLQKQS 559

Query: 362 LCSQFSFSTLL------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             +Q +FS +L             IL +C +  ++E GK IH   +K    ++    + L
Sbjct: 560 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 619

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++   F L+   + N D   WN ++    Q+G  +EA+K F+ M Q +N  P
Sbjct: 620 VDMYSKCGNM-QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM-QLENVKP 677

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           +  T + V+ ACG++ L  +G  LH   ++ S  GLD ++++   ++ + GR   +  A 
Sbjct: 678 NHATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKAL 735

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
            + E   +  +   W  ++S        EV     +  L+ EP + +   +LS
Sbjct: 736 ELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 788


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 231/729 (31%), Positives = 367/729 (50%), Gaps = 47/729 (6%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +  L QG+ +H   +K+ + A   L    ++MY KCG L  +   F  M      +WN +
Sbjct: 59  VKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAM 116

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           M   + +    + +  ++EM   G   D  +  S + A   LGE   G  IH + +K G+
Sbjct: 117 MGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGF 176

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGFALNGKFEEAFD 263
            +  +V V N+LI+MY +CGD+  A   F G  M  +D VSWN+II      GK  EA  
Sbjct: 177 GE--FVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALS 234

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L   MQ +  V  +  T V  +    D   ++ G  +HG A++     D+ + N+L+  Y
Sbjct: 235 LFRRMQEV-GVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMY 293

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TL 371
           +K   +  AE +F ++    D VSWN+++SGL +  LY  +   F             ++
Sbjct: 294 AKCGRMEDAERVFASML-CRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSV 352

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQR 428
           L ++ +     +L  GK +H + ++ G  +N    N L+ MY  C     +  AF  +  
Sbjct: 353 LNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECM-- 410

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
             H  D   W  +I    QN    EAI  F+ + Q +    D + + +V+ AC  L+   
Sbjct: 411 --HEKDLISWTTIIAGYAQNECHLEAINLFRKV-QVKGMDVDPMMIGSVLRACSGLKSRN 467

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
             + +HG   K  +  D  +QNA++ +YG       A   FES  + ++ +W  MI+   
Sbjct: 468 FIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCV 526

Query: 549 QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
            N   V ALELF  L+    +P+ I+I+S LSA   L  L+ GK+IHG +   GF     
Sbjct: 527 HNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP 586

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           I+S+L+DMY+ C               +    W+SMI+A G HG G EAI LF +M +  
Sbjct: 587 IASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDEN 646

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           + P   + ++LL ACSHSGL+ EG +++  M   Y + P  EH+ C+VD+L RS  L+EA
Sbjct: 647 VIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEA 706

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           Y+F++++PI+P   VW A+L AC  H + ++G+  A+ L + + +N G Y  +SN++ A 
Sbjct: 707 YQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAAD 766

Query: 771 GRWKDAVEI 779
           GRW D  E+
Sbjct: 767 GRWNDVEEV 775



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 239/471 (50%), Gaps = 19/471 (4%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +D V+WN++I+A V     +  L  F  M E G+  ++ T +  +  +   + +K G  
Sbjct: 210 KEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMG 269

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  ++K+   AD  + N  + MYAKCG +  +E  F+ M C D VSWNT++SG + N  
Sbjct: 270 IHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNEL 329

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               L YFR+M  S ++ D VS+ + +AAS   G L  GK +HA  I+ G + +  + + 
Sbjct: 330 YRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSN--MQIG 387

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LI MY++C  ++    AF  M  KD++SW  II G+A N    EA +L  ++Q+ + +
Sbjct: 388 NTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQV-KGM 446

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D   + +++  C+        R +HGY  +R L  D+++ N++++ Y +      A  
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARR 505

Query: 335 LFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPE 382
            F +I    D+VSW SMI+     GL  E L L      +        +++ L +  +  
Sbjct: 506 AFESIRS-KDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLS 564

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           SL+ GK IH + ++ GF       ++L+ MY  CG +  +  +   +    D   W  +I
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMI 623

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            A   +G   EAI  FK MT  +N  PD +T + ++ AC +  L  EGK  
Sbjct: 624 NANGMHGCGNEAIALFKKMT-DENVIPDHITFLALLYACSHSGLMVEGKRF 673



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 197/397 (49%), Gaps = 17/397 (4%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
            A +  + +L+  Y+     E +  +F     +D V+WN +++  V+N      L++F +
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRD 339

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M     + D  ++L +++A  +   L  G+ VH  +I+ G+ ++  + N  ++MYAKC  
Sbjct: 340 MQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCC 399

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +      F  MH  D +SW TI++G   N    + +  FR++   G   D + + S + A
Sbjct: 400 VKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + L   ++ + IH    K    D   + + N+++++Y + G  + A RAF  +  KD+V
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDLAD---IMLQNAIVNVYGEVGHRDYARRAFESIRSKDIV 516

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW ++I     NG   EA +L + ++   +++PD   +++ +S  A+   L++G+ +HG+
Sbjct: 517 SWTSMITCCVHNGLPVEALELFYSLK-QTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
            IR+    +  + +SL+D Y+   ++  +  +F+++    DL+ W SMI+          
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNE 634

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
              LFK+M          T LA+L +C+    +  GK
Sbjct: 635 AIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGK 671



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 1/237 (0%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           LA +    +++  Y  V + + +   F    +KD+V+W +MIT CV N   V  L  F  
Sbjct: 481 LADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           + +  I+ DS  ++  +SA   ++ LK+G+ +H   I+ G   +  + +  V+MYA CG 
Sbjct: 541 LKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGT 600

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           + +S   F  +   D + W ++++    +    + +  F++M       D+++  + + A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYA 660

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +  G +  GK    + +K GY+  P+      ++ + S+   +E A +    M  K
Sbjct: 661 CSHSGLMVEGKRFFEI-MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIK 716



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 46/93 (49%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF    P ++SL+  Y+     E+S  +F+    +D++ W +MI A   + C    +  
Sbjct: 579 KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIAL 638

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
           F +M +E +  D  T L ++ A +    + +G+
Sbjct: 639 FKKMTDENVIPDHITFLALLYACSHSGLMVEGK 671


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 211/701 (30%), Positives = 345/701 (49%), Gaps = 40/701 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  YA  GD  ++   F  M   D VSWN ++SG          +    EM 
Sbjct: 69  DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMA 128

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  +L+  + A   L +L+ G  IHA+ +K G E    V   ++L+ MY +C  
Sbjct: 129 RRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMD--VRAGSALVDMYGKCRS 186

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTL 284
           +E A R F GM  ++ VSW A I G   N ++    +L  +MQ +     +P  A+V   
Sbjct: 187 LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV--- 243

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
              CA    L   R +H +AI+     D ++  +++D Y+K++SL  A   F ++ P + 
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL-PNHT 302

Query: 345 LVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           + + N+M+ GL            F+ M      F   +L  +  +C   +    G  +HC
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHC 362

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K GF  +    NA++ +Y  C  LV A+ + Q +    D+  WN +I A  QN  ++
Sbjct: 363 LAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQR-DSVSWNAIIAALEQNECYE 421

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           + I     M +     PD  T  +V+ AC  L+    G  +HG A+KS +GLD  V + +
Sbjct: 422 DTIAYLNEMLRY-GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           + MY +C  I  A  + +      L +WN +IS FS NK    A + F  +     +P+ 
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDH 540

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN--------- 620
            +  ++L  C  L  +  GKQIHG +       + +ISS L+DMY+ C +          
Sbjct: 541 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 600

Query: 621 ------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                  +W++MI  Y  HG+G+EA+E+F  M  + + P  ++ +++L ACSH GL+D+G
Sbjct: 601 AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +Y+  M   Y + P+ EH  C+VD+LGRS   QEA +FI+++P++    +W  +LS C 
Sbjct: 661 CRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICK 720

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              D ++ +  A  + +L+P++   YI LSN+Y   G+W D
Sbjct: 721 IRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVD 761



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 162/592 (27%), Positives = 276/592 (46%), Gaps = 21/592 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAY++     ++ +LF    + DVV+WNA+++   +       +    EM   G+  
Sbjct: 75  TMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAP 134

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TTL +++ A   +  L  G  +H +++K G+  D    +  V+MY KC  L  +   F
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   ++VSW   ++GC+ N    + L  F +M   G      + +S   + A +  LS
Sbjct: 195 HGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLS 254

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + +HA  IK  +  S    V  +++ +Y++   +  A RAF+ +    V + NA++ G
Sbjct: 255 TARQLHAHAIKNKF--SADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVG 312

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
               G   EA  L   M     +  D+ ++  + S CA+     +G  VH  AI+     
Sbjct: 313 LVRTGLGAEALQLFQFMT-RSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDV 371

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L              EM
Sbjct: 372 DVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAYLNEM 430

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T  ++L +C   +SLE+G  +H   +K G   +    + ++ MY  CG +
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMI 490

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L  RI      S WN +I   + N   +EA K F  M       PD  T   V+ 
Sbjct: 491 TEAQKLHDRIGGQELVS-WNSIISGFSLNKQSEEAQKFFSEML-DIGVKPDHFTYATVLD 548

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C NL     GK +HG  +K  M  D  + + L+ MY +C ++  +  +FE     +  +
Sbjct: 549 TCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVS 608

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           WN MI  ++ +     ALE+F  ++     PN  + V++L AC+ +G+L  G
Sbjct: 609 WNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 267/592 (45%), Gaps = 23/592 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   ++L+  Y      E +L  F+    ++ V+W A I  CV+N     GL  F
Sbjct: 166 GLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELF 225

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+         +  +   + CL   R +H  +IK    AD  +    V++YAK 
Sbjct: 226 VQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKA 285

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  +      + N +M G +      + L  F+ M  SG   D VSLS   
Sbjct: 286 DSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVF 345

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +     G  +H L IK G++    V V N+++ +Y +C  +  A   F  M  +D
Sbjct: 346 SACAEVKGYLQGLQVHCLAIKSGFDVD--VCVRNAILDLYGKCKALVEAYLVFQEMEQRD 403

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNAII     N  +E+    L+EM L   +EPD  T  +++  CA    L  G  VH
Sbjct: 404 SVSWNAIIAALEQNECYEDTIAYLNEM-LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G AI+  LG D  + ++++D Y K   +++A+ L + I    +LVSWNS+ISG       
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG-QELVSWNSIISGFSLNKQS 521

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F EML +  +    T   +L +C +  ++E GK IH   +K     +    + L
Sbjct: 522 EEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTL 581

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++  +  + ++ +   D   WN +I     +G   EA++ F+ M QQ N  P
Sbjct: 582 VDMYAKCGNMPDSLLMFEK-AQKLDFVSWNAMICGYALHGQGFEALEMFERM-QQANVVP 639

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
           +  T V V+ AC ++ L  +G     L + S   L+ ++++   ++ + GR +  + A  
Sbjct: 640 NHATFVAVLRACSHVGLLDDGCRYFYL-MTSRYKLEPQLEHFACMVDILGRSKGPQEALK 698

Query: 528 VFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
              S     +   W  ++S    +   EV        L  +P++ S+  +LS
Sbjct: 699 FIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLS 750


>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
 gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 229/805 (28%), Positives = 383/805 (47%), Gaps = 69/805 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+     E S  +F     + V TWN MITA V++        FF E +E   R 
Sbjct: 70  ALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQH-------DFFQEALEAFRRM 122

Query: 72  D----STTLLIIVSALTQMNCLKQGRVVHCL--SIKAGMIADSSLCNVFVNMYAKCGDLN 125
           D    S T   ++ A    + L+ G+ +H         + AD  L N  V MY KCG L 
Sbjct: 123 DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLE 182

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAAS 184
            +E  F G+   +  SW  +++    N Y  + +  F +M   G  + D ++ +  + A 
Sbjct: 183 DAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTAC 242

Query: 185 ACLGELSYGKVIHAL-----GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + LG+L  G  IHAL      + L Y+D     + + ++S++++CG +      F  M  
Sbjct: 243 STLGDLETGMRIHALIHRIYTLGLEYDDV----LQDGILSLHARCGSLVGTREMFDRMPH 298

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + VV+W  +I  +   G   EA +L H M     +EPD   +  ++  C+    L +GR+
Sbjct: 299 RTVVTWTTMIAAYNQRGYSMEALELYHCMD----IEPDDIALSNVLQACSRLKNLEQGRA 354

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VH     R     L++   L+D Y K   L++A   F+      D++SW S+I+      
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKA-RDVISWTSLITAYSHEN 413

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  +F  M     + +  T   ++ +C+   SL  G+++H   +  G  ++    N
Sbjct: 414 FGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN 473

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G +  A  +   I      S W +++VA TQNGH  EA++ + S    +  
Sbjct: 474 ALVSMYSKFGRVDFARMVFDSIPVKRYPS-WRVMLVALTQNGHSHEALEMY-SRIHLEGF 531

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P S      + +C  LE     +++HG+   S    D  + N L+ +Y +C +++ A  
Sbjct: 532 RPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARL 591

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
           VF+     N  +W  MI  ++QN     ALEL++ ++ +PN I+ V ++S+C  LG L  
Sbjct: 592 VFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISSCADLGALVE 651

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGY 632
           G+++H  +   G Q N  I +AL++MY+                C    AW+SM +AY  
Sbjct: 652 GQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQ 711

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
            G G + +EL+ EMC  G++P   +++S+L ACSH G+++E    +  M+ ++ + P +E
Sbjct: 712 FGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSE 771

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNL----------PIQPKPGVWGAMLSACSHHGDTKMG 742
           H+ C+ D+LGRSG+L+EA + +K            P+      W + L AC  H D    
Sbjct: 772 HYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPV--AVSAWMSFLGACKTHNDWGRA 829

Query: 743 KQVAELLFKLEPENVGYYISLSNMY 767
              AE L++L+PE+   Y+ LS  Y
Sbjct: 830 AGAAEKLYELDPEDSAPYVLLSQTY 854



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 203/744 (27%), Positives = 350/744 (47%), Gaps = 54/744 (7%)

Query: 44  MITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG 103
           MI+A  +       L  + EM E G+  +  T   ++SA   +  +++G+ VH    ++ 
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 104 MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR 163
              D+ L N  +N+YAKCGDL  S   F  M      +WNT+++  + +++ ++ L  FR
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS----VTNSLIS 219
            M        +++ +S + A     +L  GK IH    ++G   SP +     + NSL++
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHR---QIG-GSSPQIQADEILQNSLVT 173

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY +CG +E AER F G+  K+  SW A+I  +A NG    A ++  +M     VEPD  
Sbjct: 174 MYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPI 233

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRL----LGYDLLMMNSLMDFYSKSNSLSKAELL 335
           T   +++ C+    L  G  +H   I R+    L YD ++ + ++  +++  SL     +
Sbjct: 234 TYAGVLTACSTLGDLETGMRIHAL-IHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREM 292

Query: 336 FNAIAPMNDLVSWNSMISGLFKE-------MLYLCSQFSFS--TLLAILPSCNSPESLEF 386
           F+ + P   +V+W +MI+   +         LY C         L  +L +C+  ++LE 
Sbjct: 293 FDRM-PHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQ 351

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G+++H       F  + +    L+ MY+ CGDL  A           D   W  +I A +
Sbjct: 352 GRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKAR-DVISWTSLITAYS 410

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
                +EA++ F SM + +   P+S+T   VI AC  L     G++LH   + +    D 
Sbjct: 411 HENFGREALEVFHSM-ELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDE 469

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--HLE 564
            V NAL++MY +   +  A  VF+S       +W  M+ A +QN     ALE++   HLE
Sbjct: 470 FVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLE 529

Query: 565 -FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
            F P      + L +CT L  +   + IHG +    F  +  +S+ L+++Y+ C      
Sbjct: 530 GFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKA 589

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K+  +W++MI  Y  +G+  EA+EL+  M    ++P   + + ++S+C+  
Sbjct: 590 RLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADL 646

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           G + EG Q  +  L +  ++        +V+M  + GKL  A EF  +    P  G W +
Sbjct: 647 GALVEG-QRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-PDAGAWNS 704

Query: 729 MLSACSHHGDTKMGKQVAELLFKL 752
           M +A +  G    G QV EL  ++
Sbjct: 705 MATAYAQFGH---GSQVLELYREM 725



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 181/361 (50%), Gaps = 28/361 (7%)

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I A  Q G+ +EA++ ++ M  ++   P+  T   V+SAC  L+    GK +H    +S
Sbjct: 1   MISAYAQKGYHREALELYEEM-DERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRES 59

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
           +  +DT +QNAL+ +Y +C D++ +  +FE+     + TWN MI+A+ Q+     ALE F
Sbjct: 60  VARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF 119

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV--FHLGFQENSFISSALLDMYSNC- 617
           R ++  P+ I+  S+L AC     L  GK IH  +       Q +  + ++L+ MY  C 
Sbjct: 120 RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCG 179

Query: 618 -------------KSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLL 662
                        + NA +W++MI+AY  +G    AIE+F +M + G + P   +   +L
Sbjct: 180 SLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVL 239

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEH--HVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +ACS  G ++ G++ +  +   Y +  E +      I+ +  R G L    E    +P +
Sbjct: 240 TACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHR 299

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIG 780
                W  M++A +  G +    ++   +  +EP++    I+LSN+  A  R K+ +E G
Sbjct: 300 TVV-TWTTMIAAYNQRGYSMEALELYHCM-DIEPDD----IALSNVLQACSRLKN-LEQG 352

Query: 781 K 781
           +
Sbjct: 353 R 353


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 202/602 (33%), Positives = 326/602 (54%), Gaps = 38/602 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           + + N+L+SM+ + G++  A   F  M  +++ SWN ++ G+A  G F+EA DL H M L
Sbjct: 141 LQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM-L 199

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              V+PD+ T   ++  C     L  GR +H + IR     D+ ++N+L+  Y K   ++
Sbjct: 200 WVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVN 259

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A L+F+ + P  D +SWN+MISG            LF  M+         T+ +++ +C
Sbjct: 260 TARLVFDKM-PNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC 318

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                   G+ IH + L+  F  +    N+L+ MY + G +  A ++  R +   D   W
Sbjct: 319 ELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSR-TECRDLVSW 377

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSLHG 495
             +I         Q+A++T+K M + +   PD +T+  V+SAC    NL++   G +LH 
Sbjct: 378 TAMISGYENCLMPQKALETYK-MMEAEGIMPDEITIAIVLSACSCLCNLDM---GMNLHE 433

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +A +  +   + V N+LI MY +C+ I  A  +F S    N+ +W  +I     N     
Sbjct: 434 VAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFE 493

Query: 556 ALELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           AL  FR +    +PN +++V +LSAC ++G L  GK+IH H    G   + F+ +A+LDM
Sbjct: 494 ALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDM 553

Query: 614 YSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           Y  C                  +W+ +++ Y   GKG  A ELF  M  S + P + + I
Sbjct: 554 YVRCGRMEYAWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFI 613

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L ACS SG+V EGL+Y+N+M  +Y + P  +H+ C+VD+LGRSGKL+EAYEFI+ +P+
Sbjct: 614 SILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPM 673

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P P VWGA+L++C  H   ++G+  AE +F+ +  +VGYYI LSN+Y   G+W    E+
Sbjct: 674 KPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEV 733

Query: 780 GK 781
            K
Sbjct: 734 RK 735



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 237/496 (47%), Gaps = 20/496 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +LL+ +        +  +F     +++ +WN ++    +       L  +  M+ 
Sbjct: 141 LQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLW 200

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G++ D  T   ++     M  L +GR +H   I+ G  +D  + N  + MY KCGD+N+
Sbjct: 201 VGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNT 260

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D +SWN ++SG   N    + L  F  M       D ++++S + A   
Sbjct: 261 ARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LG+   G+ IH   ++  +   P  S+ NSLI MYS  G IE AE  F    C+D+VSW 
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDP--SIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWT 378

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G+      ++A +  ++M     + PD  T+  ++S C+    L  G ++H  A +
Sbjct: 379 AMISGYENCLMPQKALE-TYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQ 437

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
           + L    ++ NSL+D Y+K   + KA  +F++    N +VSW S+I GL           
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKN-IVSWTSIILGLRINNRCFEALF 496

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F+EM+      S  TL+ +L +C    +L  GK IH   L+ G S +    NA++ MY+
Sbjct: 497 FFREMIRRLKPNSV-TLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYV 555

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG +  A+     + H  + + WNI++    + G    A + F+ M  + N SP+ VT 
Sbjct: 556 RCGRMEYAWKQFFSVDH--EVTSWNILLTGYAERGKGAHATELFQRMV-ESNVSPNEVTF 612

Query: 475 VNVISACGNLELAFEG 490
           ++++ AC    +  EG
Sbjct: 613 ISILCACSRSGMVAEG 628



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 251/543 (46%), Gaps = 43/543 (7%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N+ I    L G  + A   L  M  +R  VE D    V LI LC      +EG  V+ Y 
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDD--AYVALIRLCEWKRARKEGSRVYSYV 132

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
              +    L + N+L+  + +  +L  A  +F  +   N L SWN ++ G          
Sbjct: 133 SISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRN-LFSWNVLVGGYAKAGLFDEA 191

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L+  ML++  +    T   +L +C    +L  G+ IH   ++ GF ++   VNAL+ M
Sbjct: 192 LDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITM 251

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y+ CGD+  A  +  ++  N D   WN +I    +NG   E ++ F  M +     PD +
Sbjct: 252 YVKCGDVNTARLVFDKMP-NRDRISWNAMISGYFENGVCLEGLRLFGMMIKYP-VDPDLM 309

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T+ +VI+AC  L     G+ +HG  L++  G D  + N+LI MY     I+ A TVF   
Sbjct: 310 TMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRT 369

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              +L +W  MIS +       +ALE ++ +E E   P+EI+I  +LSAC+ L  L  G 
Sbjct: 370 ECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGM 429

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H      G    S ++++L+DMY+ C               K+  +W+S+I     + 
Sbjct: 430 NLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINN 489

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           + +EA+  F EM    ++P   +++ +LSAC+  G +  G + + + L    V  +    
Sbjct: 490 RCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRT-GVSFDGFMP 547

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
             I+DM  R G+++ A++  +   +  +   W  +L+  +  G    G    EL  ++  
Sbjct: 548 NAILDMYVRCGRMEYAWK--QFFSVDHEVTSWNILLTGYAERGK---GAHATELFQRMVE 602

Query: 755 ENV 757
            NV
Sbjct: 603 SNV 605



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 226/467 (48%), Gaps = 25/467 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T Y       ++  +F +  N+D ++WNAMI+   EN   + GL  F
Sbjct: 237 GFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLF 296

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M++  +  D  T+  +++A   +   + GR +H   ++     D S+ N  + MY+  
Sbjct: 297 GMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSV 356

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  FS   C D VSW  ++SG  +   P+K L  ++ M   G   D ++++  +
Sbjct: 357 GLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVL 416

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A +CL  L  G  +H +  + G     Y  V NSLI MY++C  I+ A   F     K+
Sbjct: 417 SACSCLCNLDMGMNLHEVAKQKGL--VSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKN 474

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW +II G  +N +  EA     EM  +R ++P+  T+V ++S CA    L  G+ +H
Sbjct: 475 IVSWTSIILGLRINNRCFEALFFFREM--IRRLKPNSVTLVCVLSACARIGALTCGKEIH 532

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +A+R  + +D  M N+++D Y +   +  A   F ++   +++ SWN +++G       
Sbjct: 533 AHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD--HEVTSWNILLTGYAERGKG 590

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
                LF+ M+      +  T ++IL +C+      E LE+  S+   + K     N   
Sbjct: 591 AHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSM---KYKYSIMPNLKH 647

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              ++ +    G L  A+  +Q++    D + W  ++ +C  + H +
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVE 694



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 27/299 (9%)

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           HN ++  + + ++     G+   A+    SM + +    D    V +I  C       EG
Sbjct: 72  HNPNSHIYQLCLL-----GNLDRAMSYLDSMHELRIPVEDD-AYVALIRLCEWKRARKEG 125

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
             ++     S+  L  ++ NAL++M+ R  ++  A  VF      NL +WN ++  +++ 
Sbjct: 126 SRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKA 185

Query: 551 KAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL+L+  + +   +P+  +   +L  C  +  L  G++IH HV   GF+ +  + 
Sbjct: 186 GLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVV 245

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+ MY  C               +   +W++MIS Y  +G   E + LF  M    + 
Sbjct: 246 NALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVD 305

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEA 710
           P   ++ S+++AC   G    G Q +  +L  E+   P    H  ++ M    G ++EA
Sbjct: 306 PDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEA 362



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 122/253 (48%), Gaps = 8/253 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC-VENRCVVMGLH 59
           +G +++   + SL+  Y+     + +L +F+ T  K++V+W ++I    + NRC    L 
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRC-FEALF 496

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FF EM+   ++ +S TL+ ++SA  ++  L  G+ +H  +++ G+  D  + N  ++MY 
Sbjct: 497 FFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYV 555

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +CG +  + +  FS  H  +  SWN +++G             F+ M  S    + V+  
Sbjct: 556 RCGRMEYAWKQFFSVDH--EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFI 613

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A +  G ++ G + +   +K  Y   P +     ++ +  + G +E A      M 
Sbjct: 614 SILCACSRSGMVAEG-LEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMP 672

Query: 239 CK-DVVSWNAIID 250
            K D   W A+++
Sbjct: 673 MKPDPAVWGALLN 685


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 230/730 (31%), Positives = 375/730 (51%), Gaps = 41/730 (5%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSG--MHCADTV 140
           +++  L Q + VH L I  G +  S SLC   +  YAK     S    F+    +C    
Sbjct: 65  SKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAF 124

Query: 141 SWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
            WNT++    +  N        +  M   G Q D+ +    +   +   ++  G  +H +
Sbjct: 125 LWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGV 184

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
             KLG++   YV   N+L+ +Y  CG +  A R F  M  +DVVSWN II   ++NG + 
Sbjct: 185 VFKLGFDTDVYVG--NTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYT 242

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA +    M L   ++P++ +V++L+ + A        R +H Y+++  L   +   N+L
Sbjct: 243 EARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNAL 302

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFS 367
           +D Y K  S+     +FN     N+ VSWNS+I+GL            F+ M+   +Q +
Sbjct: 303 VDAYGKCGSVKALWQVFNETVEKNE-VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPN 361

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T+ +ILP     E  + GK IH + +++G   +    N+L+ MY   G    A ++  
Sbjct: 362 SVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFH 421

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +   +  S WN +I     N    EAI+ F    Q+    P++VT  NV+ AC  L   
Sbjct: 422 NLDRRNIVS-WNAMIANYALNRLPLEAIR-FVIQMQETGECPNAVTFTNVLPACARLGFL 479

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             GK +H + ++  +  D  V N+LI MY +C  + SA  VF +    +  ++N +I  +
Sbjct: 480 GPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRK-DEVSYNILIIGY 538

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           S+    +++L LF   R L  +P+ +S V ++SAC  L  L+ GK++HG         + 
Sbjct: 539 SETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHL 598

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           F+S++LLD Y+ C               K  A+W++MI  YG  G+   AI +F  M + 
Sbjct: 599 FVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDD 658

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            ++    S I++LSACSH GLV+ G QY++ ML +  + P   H+ C+VD+LGR+G ++E
Sbjct: 659 TVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEE 717

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A + I+ LPI P   +WGA+L AC  +G+ ++G++ AE LF+L+P++ GYYI LSN+Y  
Sbjct: 718 AAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAE 777

Query: 770 LGRWKDAVEI 779
            GRW +A +I
Sbjct: 778 TGRWDEANKI 787



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 193/748 (25%), Positives = 348/748 (46%), Gaps = 55/748 (7%)

Query: 2   GFLAH-LPTSTSLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITA-CVENRCVVMG 57
           GFL   +    SL+  Y+   +  S  +LF +T    +    WN +I A  +       G
Sbjct: 84  GFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDG 143

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
              +  MV  G++ D  T   ++   +    + +G  VH +  K G   D  + N  + +
Sbjct: 144 FETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLML 203

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL--HNNYPEKCLLYFREMGWSGEQADNV 175
           Y  CG LN +   F  M   D VSWNTI+ G L  + +Y E    YF  +  S  + + V
Sbjct: 204 YGNCGFLNDARRLFDEMPERDVVSWNTII-GLLSVNGDYTEARNYYFWMILRSVIKPNLV 262

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           S+ S +  SA L +    + IH   +K+G +    V+  N+L+  Y +CG ++A  + F 
Sbjct: 263 SVISLLPISAALEDEEMTRRIHCYSVKVGLDSQ--VTTCNALVDAYGKCGSVKALWQVFN 320

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               K+ VSWN+II+G A  G+  +A +    M +    +P+  T+ +++ +  +    +
Sbjct: 321 ETVEKNEVSWNSIINGLACKGRCWDALNAF-RMMIDAGAQPNSVTISSILPVLVELECFK 379

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ +HG+++R     D+ + NSL+D Y+KS   ++A  +F+ +   N +VSWN+MI+  
Sbjct: 380 AGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRN-IVSWNAMIANY 438

Query: 355 ----LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
               L  E +    Q   +       T   +LP+C     L  GK IH   +++G +++ 
Sbjct: 439 ALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDL 498

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              N+L+ MY  CG L +A ++    +   D   +NI+I+  ++     +++  F  M +
Sbjct: 499 FVSNSLIDMYAKCGCLHSARNVFN--TSRKDEVSYNILIIGYSETDDCLQSLNLFSEM-R 555

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
                PD V+ V VISAC NL    +GK +HG+AL++ +     V N+L+  Y +C  I 
Sbjct: 556 LLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRID 615

Query: 524 SASTVFESCYNCNLCTWNCMISAF---SQNKAEVRALELFRHLEFEPNEISIVSILSACT 580
            A  +F      ++ +WN MI  +    + +  +   E  R    + + +S +++LSAC+
Sbjct: 616 IACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACS 675

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
             G++  G Q    +     +          +M+  C        M+   G  G   EA 
Sbjct: 676 HGGLVERGWQYFSEMLAQRLEPT--------EMHYTC--------MVDLLGRAGFVEEAA 719

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVD 699
           +L  ++    I P  +   +LL AC   G V+ G +   ++ E   ++P+   +++ + +
Sbjct: 720 KLIQQL---PIAPDANIWGALLGACRIYGNVELGRRAAEHLFE---LKPQHCGYYILLSN 773

Query: 700 MLGRSGKLQEA---YEFIKNLPIQPKPG 724
           +   +G+  EA    E +K+   +  PG
Sbjct: 774 IYAETGRWDEANKIRELMKSRGAKKNPG 801



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 228/532 (42%), Gaps = 72/532 (13%)

Query: 282 VTLISLCADSLLLREGRSVH------GYAIRRLLGYDLLMMN--------SLMDFYSKSN 327
           + L++LC+    L + + VH      G+  R +     L++N        S    ++++ 
Sbjct: 58  INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTF 117

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL--FKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
              +   L+N +   +  ++WN    G   +  M+    Q    T   +L  C+    + 
Sbjct: 118 QNCRTAFLWNTLIRAHS-IAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDIC 176

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G  +H    KLGF  +    N L+ +Y NCG L  A  L   +    D   WN +I   
Sbjct: 177 KGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER-DVVSWNTIIGLL 235

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           + NG + EA   +  M  +    P+ V++++++     LE     + +H  ++K  +GLD
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVK--VGLD 293

Query: 506 TRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           ++V   NAL+  YG+C  +K+   VF      N  +WN +I+  +       AL  FR +
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
                +PN ++I SIL    +L   + GK+IHG    +G + + FI+++L+DMY+     
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       ++  +W++MI+ Y  +    EAI    +M  +G  P   +  ++L AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473

Query: 666 SHSGLVDEGLQYY---------------NNMLEEY---------------DVRPETEHHV 695
           +  G +  G + +               N++++ Y                 + E  +++
Sbjct: 474 ARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNI 533

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGV--WGAMLSACSHHGDTKMGKQV 745
            I+        LQ    F +   +  KP V  +  ++SAC++    K GK+V
Sbjct: 534 LIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEV 585


>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
 gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
          Length = 921

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 224/793 (28%), Positives = 384/793 (48%), Gaps = 48/793 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IR 70
           SL+T Y      E +  +F+    K+  +W AMITA  +N      +  FG+M+ EG + 
Sbjct: 139 SLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVE 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T   +++A + +  L+ G  +H L I++  +  + +    +++Y K G    +   
Sbjct: 199 PDPITYAGVLTACSTLGDLETGMRIHAL-IRSKGVESAMVSTGLIDLYGKWGFFEDALQV 257

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D V W   ++ C+++      L  FR+M   G QA+NV+ S  +AA + L + 
Sbjct: 258 FESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDF 317

Query: 191 SYGKVIHALGIKLGYEDSPYVSV-TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             GK I      LG E   Y  V  + ++S++++CG +      F  M  + VV+W  +I
Sbjct: 318 ETGKTIEDRIYTLGLE---YDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMI 374

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +   G   EA +L H M     +EPD   +  ++  C+    L +GR+VH     R  
Sbjct: 375 AAYNQRGYSMEALELYHCMD----IEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDF 430

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
              L++   L+D Y K   L++A   F+      D++SW S+I+             +F 
Sbjct: 431 EPSLMVQTLLVDMYVKCGDLAEARRTFDGFKA-RDVISWTSLITAYSHENFGREALEVFH 489

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + +  T   ++ +C+   SL  G+++H   +  G  ++    NAL+ MY   G
Sbjct: 490 SMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFG 549

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  +   I      S W +++VA TQNGH  EA++ + S    +   P S      
Sbjct: 550 RVDFARVVFDSIPVKRYPS-WRVMLVALTQNGHSHEALEMY-SRIHLEGFRPGSPIFSAA 607

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + +C  LE     +++HG+   S    D  + N L+ +Y +C +++ A  VF+     N 
Sbjct: 608 LVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNE 667

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
            +W  MI  ++QN     ALEL++ ++ +PN I+ V ++S+C  LG L  G+++H  +  
Sbjct: 668 VSWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISSCADLGALVEGQRVHARLSD 727

Query: 598 LGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIEL 642
            G Q N  I +AL++MY+                C    AW+SM +AY   G G + +EL
Sbjct: 728 AGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLEL 787

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           + EMC  G++P   +++S+L ACSH G+++E    +  M+ ++ + P +EH+ C+ D+LG
Sbjct: 788 YREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLG 847

Query: 703 RSGKLQEAYEFIKNLPIQ-----PKP---GVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           RSG+L+EA + +K    +       P     W + L AC  H D       AE L++L+P
Sbjct: 848 RSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDP 907

Query: 755 ENVGYYISLSNMY 767
           E+   Y+ LS  Y
Sbjct: 908 EDSAPYVLLSQTY 920



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 200/769 (26%), Positives = 350/769 (45%), Gaps = 91/769 (11%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T   ++SA   +  +++G+ VH    ++    D+ L N  +N+YAKCGDL  S   F  M
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
                 +WNT+++  + +++ ++ L  FR M        +++ +S + A     +L  GK
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRMD---APPSSITFTSVLGACCSPDDLETGK 117

Query: 195 VIHALGIKLGYEDSPYVS----VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            IH    ++G   SP +     + NSL++MY +CG +E AER F G+  K+  SW A+I 
Sbjct: 118 AIHR---QIG-ASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMIT 173

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A NG    A ++  +M     VEPD  T   +++ C+    L  G  +H  A+ R  G
Sbjct: 174 AYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIH--ALIRSKG 231

Query: 311 YDLLMMNS-LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            +  M+++ L+D Y K      A  +F ++    D+V W + I+             LF+
Sbjct: 232 VESAMVSTGLIDLYGKWGFFEDALQVFESVRD-RDVVIWTAFIAACVYHGQSGFALELFR 290

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M     Q +  T   IL +C++ E  E GK+I      LG   + +  + ++ ++  CG
Sbjct: 291 KMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCG 350

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            LV    +  R+ H +  + W  +I A  Q G+  EA++ +  M    +  PD + L NV
Sbjct: 351 SLVGTREMFDRMPHRTVVT-WTTMIAAYNQRGYSMEALELYHCM----DIEPDDIALSNV 405

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC  L+   +G+++H             VQ  L+ MY +C D+  A   F+     ++
Sbjct: 406 LQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDV 465

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  +I+A+S       ALE+F  +E    EPN I+  +++ AC++L  L  G+ +H  
Sbjct: 466 ISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSR 525

Query: 595 VFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEA 639
           V   G   + F+ +AL+ MYS                 K   +W  M+ A   +G   EA
Sbjct: 526 VVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEA 585

Query: 640 IELFHEMCNSGIRP---------------------------TKSS------VIS--LLSA 664
           +E++  +   G RP                            KSS      V+S  L++ 
Sbjct: 586 LEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNV 645

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
            +  G ++E    ++ M E+ +V   T     ++    ++G+  EA E  K + +QP   
Sbjct: 646 YAKCGELEEARLVFDQMTEKNEVSWTT-----MIGGYAQNGRPAEALELYKAMDVQPNFI 700

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGR 772
            +  ++S+C+  G    G++V   L     +N    ++ L NMY   G+
Sbjct: 701 AFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGK 749



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 207/772 (26%), Positives = 351/772 (45%), Gaps = 58/772 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+     E S  +F     + V TWN MITA V++        FF E +E   R 
Sbjct: 39  ALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQH-------DFFQEALEAFRRM 91

Query: 72  D----STTLLIIVSALTQMNCLKQGRVVHCLSIKAG---MIADSSLCNVFVNMYAKCGDL 124
           D    S T   ++ A    + L+ G+ +H   I A    + AD  L N  V MY KCG L
Sbjct: 92  DAPPSSITFTSVLGACCSPDDLETGKAIH-RQIGASSPQIQADEILQNSLVTMYGKCGSL 150

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAA 183
             +E  F G+   +  SW  +++    N Y  + +  F +M   G  + D ++ +  + A
Sbjct: 151 EDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTA 210

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + LG+L  G  IHAL    G E +    V+  LI +Y + G  E A + F  +  +DVV
Sbjct: 211 CSTLGDLETGMRIHALIRSKGVESA---MVSTGLIDLYGKWGFFEDALQVFESVRDRDVV 267

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            W A I     +G+   A +L  +M+    ++ +  T   +++ C++      G+++   
Sbjct: 268 IWTAFIAACVYHGQSGFALELFRKME-AEGLQANNVTFSKILAACSNLEDFETGKTIEDR 326

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE----- 358
                L YD ++ + ++  +++  SL     +F+ + P   +V+W +MI+   +      
Sbjct: 327 IYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM-PHRTVVTWTTMIAAYNQRGYSME 385

Query: 359 --MLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
              LY C         L  +L +C+  ++LE G+++H       F  + +    L+ MY+
Sbjct: 386 ALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYV 445

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CGDL  A           D   W  +I A +     +EA++ F SM + +   P+S+T 
Sbjct: 446 KCGDLAEARRTFDGFKAR-DVISWTSLITAYSHENFGREALEVFHSM-ELEGVEPNSITF 503

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
             VI AC  L     G++LH   + +    D  V NAL++MY +   +  A  VF+S   
Sbjct: 504 CTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPV 563

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFR--HLE-FEPNEISIVSILSACTQLGVLRHGKQI 591
               +W  M+ A +QN     ALE++   HLE F P      + L +CT L  +   + I
Sbjct: 564 KRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAI 623

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HG +    F  +  +S+ L+++Y+ C               K+  +W++MI  Y  +G+ 
Sbjct: 624 HGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRP 683

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            EA+EL+  M    ++P   + + ++S+C+  G + EG Q  +  L +  ++        
Sbjct: 684 AEALELYKAM---DVQPNFIAFVPVISSCADLGALVEG-QRVHARLSDAGLQNNEVIVTA 739

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           +V+M  + GKL  A EF  +    P  G W +M +A +  G    G QV EL
Sbjct: 740 LVNMYAKCGKLGLAREFFDSTYC-PDAGAWNSMATAYAQFGH---GSQVLEL 787



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 164/591 (27%), Positives = 289/591 (48%), Gaps = 27/591 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST L+  Y    +FE +L +F    ++DVV W A I ACV +      L  F +M  EG+
Sbjct: 238 STGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGL 297

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + ++ T   I++A + +   + G+ +       G+  D  L +  ++++A+CG L  +  
Sbjct: 298 QANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTRE 357

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M     V+W T+++      Y  + L  +  M     + D+++LS+ + A + L  
Sbjct: 358 MFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDI---EPDDIALSNVLQACSRLKN 414

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+ +H+      +E  P + V   L+ MY +CGD+  A R F G   +DV+SW ++I
Sbjct: 415 LEQGRAVHSRIASRDFE--PSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLI 472

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             ++      EA ++ H M+L   VEP+  T  T+I  C+    L  GR++H   +    
Sbjct: 473 TAYSHENFGREALEVFHSMEL-EGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGH 531

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCS 364
             D  + N+L+  YSK   +  A ++F++I P+    SW  M+  L +     E L + S
Sbjct: 532 ISDEFVGNALVSMYSKFGRVDFARVVFDSI-PVKRYPSWRVMLVALTQNGHSHEALEMYS 590

Query: 365 QFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +              A L SC + E +   ++IH       F  + +  N LM++Y  CG
Sbjct: 591 RIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCG 650

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A  +  +++  ++ S W  +I    QNG   EA++ +K+M  Q    P+ +  V V
Sbjct: 651 ELEEARLVFDQMTEKNEVS-WTTMIGGYAQNGRPAEALELYKAMDVQ----PNFIAFVPV 705

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           IS+C +L    EG+ +H     + +  +  +  AL+ MY +C  +  A   F+S Y  + 
Sbjct: 706 ISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDA 765

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
             WN M +A++Q     + LEL+R +     +PN I+++S+L AC+ +G+L
Sbjct: 766 GAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGML 816



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 165/331 (49%), Gaps = 32/331 (9%)

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T   V+SAC  L+    GK +H    +S+  +DT +QNAL+ +Y +C D++ +  +FE+ 
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
               + TWN MI+A+ Q+     ALE FR ++  P+ I+  S+L AC     L  GK IH
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRMDAPPSSITFTSVLGACCSPDDLETGKAIH 120

Query: 593 GHV--FHLGFQENSFISSALLDMYSNC--------------KSNA-AWSSMISAYGYHGK 635
             +       Q +  + ++L+ MY  C              + NA +W++MI+AY  +G 
Sbjct: 121 RQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGY 180

Query: 636 GWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              AIE+F +M + G + P   +   +L+ACS  G ++ G++ +  ++    V       
Sbjct: 181 ERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIH-ALIRSKGVESAMV-S 238

Query: 695 VCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
             ++D+ G+ G  ++A   +E +++  +     +W A ++AC +HG +       EL  K
Sbjct: 239 TGLIDLYGKWGFFEDALQVFESVRDRDVV----IWTAFIAACVYHGQSGFA---LELFRK 291

Query: 752 LEPENV-GYYISLSNMYVALGRWKDAVEIGK 781
           +E E +    ++ S +  A    +D  E GK
Sbjct: 292 MEAEGLQANNVTFSKILAACSNLED-FETGK 321


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 212/599 (35%), Positives = 321/599 (53%), Gaps = 38/599 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SLI +Y++ G IE A R F  M  KD V WN +++GF   G+   A  +  +M+  +
Sbjct: 9   VGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ 68

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           + +P+  T  +++S+CA   L   G  +HG  I     +D L+ N+L+  YSK   LS A
Sbjct: 69  T-KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDA 127

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             LFN + P  ++V+WN MI+G            LF EM+         T  + LPS   
Sbjct: 128 LKLFNTM-PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTE 186

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             SL+ GK IH + L+ G + +    +AL+ +Y  C D+  A  + ++ S N D      
Sbjct: 187 SASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ-STNVDIVVCTA 245

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I     NG   +A++ F+ + +++  SP++VTL +V+ AC  L     GK LH   LK 
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEK-MSPNAVTLASVLPACAGLATLNLGKELHANILKH 304

Query: 501 LMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
             GLD R  V +A++ MY +C  +  A  +F      +   WN +I+  SQN     A++
Sbjct: 305 --GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAID 362

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LFR +  E    + +SI + LSAC  L  L HGK IH  +    F    F  SAL+DMY 
Sbjct: 363 LFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYG 422

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K+  +W+S+I+AYG HG    ++ LFH+M   GI+P   + ++
Sbjct: 423 KCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLT 482

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +LSAC H+G VD+G+QY+  M EEY +    EH+ CIVD+ GR+G+L EA+E IKN+P  
Sbjct: 483 ILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFS 542

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P  GVWG +L AC  HG+ ++ +  +  L  L+PEN G Y+ LSN++   G+W    +I
Sbjct: 543 PDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKI 601



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 221/466 (47%), Gaps = 17/466 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      + +L+  YS       +L LF    + +VVTWN MI   V+N  +      F
Sbjct: 103 GFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLF 162

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+  G+  DS T    + ++T+   LKQG+ +H   ++ G+  D  L +  +++Y KC
Sbjct: 163 SEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKC 222

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+  +   F      D V    I+SG + N      L  FR +       + V+L+S +
Sbjct: 223 RDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVL 282

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L+ GK +HA  +K G ++  +V   ++++ MY++CG ++ A + F  M  KD
Sbjct: 283 PACAGLATLNLGKELHANILKHGLDERRHVG--SAIMDMYAKCGRLDLAYQIFRRMPEKD 340

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V WNAII   + NGK +EA DL  +M     +  D  ++   +S CA+   L  G+++H
Sbjct: 341 AVCWNAIITNCSQNGKPQEAIDLFRQMG-REGLSYDCVSISAALSACANLPALHHGKAIH 399

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
            + I+     ++   ++L+D Y K  +LS A  +F+ +   N+ VSWNS+I+        
Sbjct: 400 SFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNE-VSWNSIIAAYGSHGHL 458

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF +ML    Q    T L IL +C     ++ G +   C   + G          
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC 518

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++ ++   G L  AF  ++ +  + D   W  ++ AC  +G+ + A
Sbjct: 519 IVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELA 564



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 271/606 (44%), Gaps = 58/606 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       +SL+  Y+     E +  LF +  NKD V WN M+   V+       +  F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M     + +S T   ++S        + G  +H L I  G   D  + N  V MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F+ M   + V+WN +++G + N + ++  L F EM  +G   D+++ +S +
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +      L  GK IH   ++ G   +  V + ++LI +Y +C D+  A + F   T  D
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGI--ALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V   AII G+ LNG   +A ++   + L   + P+  T+ +++  CA    L  G+ +H
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWL-LEEKMSPNAVTLASVLPACAGLATLNLGKELH 298

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++  L     + +++MD Y+K   L  A  +F  + P  D V WN++I+        
Sbjct: 299 ANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRM-PEKDAVCWNAIITNCSQNGKP 357

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M      +   ++ A L +C +  +L  GK+IH + +K  F +     +AL
Sbjct: 358 QEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESAL 417

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG+L  A  +   +   ++ S WN +I A   +GH + ++  F  M  +    P
Sbjct: 418 IDMYGKCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKML-EDGIQP 475

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D VT + ++SACG+      G+            +D  +Q      Y RC          
Sbjct: 476 DHVTFLTILSACGH-----AGQ------------VDKGIQ------YFRC-------MTE 505

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
           E      +  + C++  F +      A E  +++ F P++    ++L AC          
Sbjct: 506 EYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGAC---------- 555

Query: 590 QIHGHV 595
           ++HG+V
Sbjct: 556 RVHGNV 561


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 232/779 (29%), Positives = 397/779 (50%), Gaps = 58/779 (7%)

Query: 40  TWNAMITACVENRCVVMGLHF--FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR---- 93
           TW   ++ CV  RC   G  F     M E G+      L  +V+A     C ++GR    
Sbjct: 8   TWYTAVSGCV--RCGRDGTAFEMLRGMRERGVPLSGFALASLVTA-----CERRGRDEGI 60

Query: 94  ----VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
                +H L+ +AG++ +  +    +++Y   G ++ ++  F  M   + VSW  +M   
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
             N Y E+ L  +R+M   G   +  + ++ V+    L     G  + +  I  G ++  
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ- 179

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            VSV NSLI+M+   G +  AE+ F  M   D +SWNA+I  ++  G   + F +  +M+
Sbjct: 180 -VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               + PD  T+ +L+S+CA S     G  +H   +R  L   + ++N+L++ YS +  L
Sbjct: 239 -HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPS 377
           S AE LF  ++   DL+SWN+MIS   +            ++ +     +  T  + L +
Sbjct: 298 SDAEFLFWNMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGA 356

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C+SP +L  GK +H   L+L    N +  N+L+ MY  C  +  A  + Q +    D   
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDIVS 415

Query: 438 WNIVI--VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI-SACGNLELAFEGKSLH 494
           +N++I   A  ++G   +A++ F  M +     P+ +T++N+  S   + +L   G+ LH
Sbjct: 416 YNVLIGGYAVLEDG--TKAMQVFSWM-RSAGIKPNYITMINIHGSFASSNDLHNYGRPLH 472

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              +++    D  V N+LITMY +C +++S++ +F S  N N+ +WN +I+A  Q     
Sbjct: 473 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 532

Query: 555 RALELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL+LF  ++   N++  V +   LS+C  L  L  G Q+HG     G   +S++ +A +
Sbjct: 533 EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM 592

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY  C               +    W+++IS Y  +G   EA E F +M  +G +P   
Sbjct: 593 DMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYV 652

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + ++LLSACSH+GLVD+G+ YYN+M   + V P  +H VCIVD+LGR G+  EA +FI+ 
Sbjct: 653 TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEE 712

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           +P+ P   +W ++LS+   H + ++G++ A+ L +L+P +   Y+ LSN+Y    RW D
Sbjct: 713 MPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWAD 771



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 176/605 (29%), Positives = 301/605 (49%), Gaps = 26/605 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +      +  LF+E   ++VV+W A++ A   N  +   L  +
Sbjct: 74  GLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAY 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  +G+  ++     +VS    +     G  V    I +G+    S+ N  + M+   
Sbjct: 134 RQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNL 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +E  F  M   DT+SWN ++S   H     KC L F +M   G + D  +L S +
Sbjct: 194 GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 253

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A     S+G  IH+L ++   + S  V+V N+L++MYS  G +  AE  FW M+ +D
Sbjct: 254 SVCASSDHFSHGSGIHSLCLRSSLDSS--VTVINALVNMYSAAGKLSDAEFLFWNMSRRD 311

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSV 300
           ++SWN +I  +  N    +A   L   QL  + E P+  T  + +  C+    L +G+ V
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLG--QLFHTNESPNHLTFSSALGACSSPGALIDGKMV 369

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L  +LL+ NSL+  Y K NS+  AE +F ++ P +D+VS+N +I G      
Sbjct: 370 HAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSM-PTHDIVSYNVLIGGYAVLED 428

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGVN 407
                 +F  M     + ++ T++ I  S  S   L  +G+ +H + ++ GF ++    N
Sbjct: 429 GTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVAN 488

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY  CG+L ++ ++   I+ N +   WN +I A  Q GH +EA+K F  M Q    
Sbjct: 489 SLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAANVQLGHGEEALKLFIDM-QHAGN 546

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-S 526
             D V L   +S+C +L    EG  LHGL +KS +  D+ V NA + MYG+C  +     
Sbjct: 547 KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQ 606

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG 583
            V +       C WN +IS +++      A E F+ +     +P+ ++ V++LSAC+  G
Sbjct: 607 VVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAG 665

Query: 584 VLRHG 588
           ++  G
Sbjct: 666 LVDKG 670


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 229/802 (28%), Positives = 395/802 (49%), Gaps = 75/802 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+   Y   +  +F    N D V+W A+I   V +   +  +  F  M   G   D
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL+ +V                                   N Y   G L  +   F+
Sbjct: 243 QITLVTVV-----------------------------------NAYVALGRLADARKLFT 267

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + V+WN ++SG     + E+ + +F E+  +G +A   SL S ++A A L  L+Y
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G ++HA   K G +D+ YV   ++L++MY++C  ++AA++ F  +  +++V WNA++ GF
Sbjct: 328 GSMVHAQATKEGLDDNVYVG--SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A NG  +E  +    M+     +PD  T  ++ S CA    L  G  +H   I+     +
Sbjct: 386 AQNGLAQEVMEFFSCMK-RHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--- 369
           L + N+L+D Y+KS +L +A   F  +  ++D VSWN++I G  +E     + F F    
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFE-LMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 370 ---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    +L +I+ +C + + L+ G+  HC  +K+G   +T   ++L+ MY+ CG ++
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           AA  +   +   +  S  N +I   T  GH +EAI  F+ + Q     P  VT   ++  
Sbjct: 564 AARDVFYSMPSRNVVSV-NALIAGYTM-GHLEEAIHLFQEI-QMVGLKPTEVTFAGLLDG 620

Query: 481 CGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLC 538
           C    +   G+ +HG  +K   +     V  +L+ +Y   +    + T+F E  Y   L 
Sbjct: 621 CDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLV 680

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  +IS ++Q     +AL+ ++H+  +   P++ +  S+L AC  +  L++G++IH  +
Sbjct: 681 VWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLI 740

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNA-AWSSMISAYGYHGKGWEA 639
           FH GF  +    S+L+DMY+ C               ++N  +W+SMI     +G   EA
Sbjct: 741 FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEA 800

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +E+F +M    I P + + + +LSACSH+G V EG + ++ M+  Y ++P  +H  C+VD
Sbjct: 801 LEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVD 860

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR G L EA EFI  L  +  P +W  +L AC  HGD   GK+ A+ L +L+P++   
Sbjct: 861 ILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSS 920

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+ LS++Y     W  AV + +
Sbjct: 921 YVLLSSIYAESENWSGAVSLRR 942



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 181/684 (26%), Positives = 336/684 (49%), Gaps = 48/684 (7%)

Query: 4   LAHLPTSTSLLT---AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + H P   +L+T   AY  +     +  LF +  N +VV WN MI+   +       + F
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E+ + G++   ++L  ++SA+  ++ L  G +VH  + K G+  +  + +  VNMYAK
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +++++  F+ +   + V WN ++ G   N   ++ + +F  M   G Q D  + +S 
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A A L  L++G  +H + IK  +  + +V+  N+L+ MY++ G ++ A + F  M   
Sbjct: 417 FSACASLHYLNFGGQLHTVMIKNKFASNLFVA--NALVDMYAKSGALKEARKQFELMKIH 474

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWNAII G+      +EAF +   M +   V PD  ++ +++S CA+   L+ G+  
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRM-VSNGVLPDEVSLASIVSACANVQELKRGQQC 533

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L       +SL+D Y K   +  A  +F ++ P  ++VS N++I+G      
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM-PSRNVVSVNALIAGYTMGHL 592

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNA 408
                LF+E+  +  + +  T   +L  C+    L  G+ IH   +K GF S++ +   +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y+N    V + +L   + +      W  +I    Q  H ++A++ ++ M +  N  
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM-RSDNIL 711

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD     +V+ AC  +     G+ +H L   +   +D    ++LI MY +C D+K +  V
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 529 F-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           F E     N+ +WN MI   ++N     ALE+F+ +E +   P+E++ + +LSAC+  G 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 585 LRHGKQI----------HGHVFHLGFQEN-----SFISSALLDMYSN---CKSNAA-WSS 625
           +  G+++             V HLG   +      F++ A  + + N   CK++   WS+
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEA--EEFINKLGCKADPMLWST 889

Query: 626 MISAYGYHG---KGWEAIELFHEM 646
           ++ A   HG   +G  A +   E+
Sbjct: 890 LLGACRKHGDEVRGKRAADKLMEL 913



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 208/818 (25%), Positives = 362/818 (44%), Gaps = 125/818 (15%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F     KDV  WN++++  +++      +  F  M    +R +  T  +++SA + +  +
Sbjct: 99  FSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDV 158

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
             GR VHC   K G    S      ++MYAKC  L  +   F G    DTVSW  +++G 
Sbjct: 159 NFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGY 218

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           + + +P + +  F  M   G   D ++L + V A   LG L+                  
Sbjct: 219 VRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLA------------------ 260

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
                               A + F  +   +VV+WN +I G A  G  EEA     E++
Sbjct: 261 -------------------DARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               ++   +++ +++S  A   +L  G  VH  A +  L  ++ + ++L++ Y+K + +
Sbjct: 302 -KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 330 SKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCS----------QFSFSTLLAI 374
             A+ +FN++   N +V WN+M+     +GL +E++   S          +F+F++   I
Sbjct: 361 DAAKQVFNSLGERN-IVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS---I 416

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
             +C S   L FG  +H   +K  F++N    NAL+ MY   G L  A    + +  + +
Sbjct: 417 FSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN 476

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
            S WN +IV   Q  +  EA   F+ M       PD V+L +++SAC N++    G+  H
Sbjct: 477 VS-WNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVQELKRGQQCH 534

Query: 495 GLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            L +K  +GLDT     ++LI MY +C  + +A  VF S  + N+ + N +I+ ++    
Sbjct: 535 CLLVK--VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL 592

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISS 608
           E  A+ LF+ ++    +P E++   +L  C    +L  G+QIHG V   GF  +S  +  
Sbjct: 593 E-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCV 651

Query: 609 ALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +LL +Y N                 K    W+++IS Y       +A++ +  M +  I 
Sbjct: 652 SLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYN-------NM---------------------LEE 684
           P +++  S+L AC+    +  G + ++       NM                     L+ 
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 685 YDVRPETEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGD 738
           +   P   + +    M   L ++G  +EA E  K +  Q   P    +  +LSACSH G 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 739 TKMGKQVAELL---FKLEPENVGYYISLSNMYVALGRW 773
              G++V +L+   +KL+P        L  M   LGRW
Sbjct: 832 VSEGRKVFDLMVNNYKLQPR----VDHLGCMVDILGRW 865



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 285/630 (45%), Gaps = 76/630 (12%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +  L   +V+H  S+K G+     L NV V++Y KCG+++ ++  FS +   D  +WN++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG--ELSYGKVIHALGIKL 203
           +S  L +      +  F  M W+ E   N   + A+  SAC G  ++++G+ +H    K 
Sbjct: 114 LSMYLDHGLFATVVQSFVCM-WNHEVRPN-EFTFAMVLSACSGLQDVNFGRQVHCGVFKT 171

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G+    +      LI MY++C  +  A   F G    D VSW A+I G+  +G   EA  
Sbjct: 172 GFGFRSFCQ--GGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +   MQ +    PD  T+VT++                                   + Y
Sbjct: 230 VFDRMQRVGHA-PDQITLVTVV-----------------------------------NAY 253

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
                L+ A  LF  I P  ++V+WN MISG             F E+     + + S+L
Sbjct: 254 VALGRLADARKLFTQI-PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            ++L +  S   L +G  +H    K G  +N    +AL++MY  C  + AA  +   +  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +   WN ++    QNG  QE ++ F  M ++    PD  T  ++ SAC +L     G 
Sbjct: 373 R-NIVLWNAMLGGFAQNGLAQEVMEFFSCM-KRHGPQPDEFTFTSIFSACASLHYLNFGG 430

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            LH + +K+    +  V NAL+ MY +   +K A   FE     +  +WN +I  + Q +
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               A  +FR +      P+E+S+ SI+SAC  +  L+ G+Q H  +  +G   ++   S
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L+DMY  C               ++  + +++I+ Y   G   EAI LF E+   G++P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKP 609

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           T+ +   LL  C  + +++ G Q +  +++
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMK 639



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 209/465 (44%), Gaps = 25/465 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F ++L  + +L+  Y+     + +   F      D V+WNA+I   V+          F 
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAK 120
            MV  G+  D  +L  IVSA   +  LK+G+  HCL +K G+  D+S C  +  ++MY K
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGL--DTSTCAGSSLIDMYVK 558

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + ++   F  M   + VS N +++G    +  E+ +  F+E+   G +   V+ +  
Sbjct: 559 CGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTEVTFAGL 617

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           +        L+ G+ IH   +K G+  S  + V  SL+ +Y        +E  F  +   
Sbjct: 618 LDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVSLLCLYMNSQRFVDSETLFSELQYP 676

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K +V W A+I G+A     E+A      M+   ++ PD A   +++  CA    L+ G+ 
Sbjct: 677 KGLVVWTALISGYAQQNHHEKALQFYQHMR-SDNILPDQAAFASVLRACAGMSSLQNGQE 735

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
           +H          D +  +SL+D Y+K   +  +  +F  +   N+++SWNSMI GL K  
Sbjct: 736 IHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNG 795

Query: 358 ---EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTI 404
              E L +  Q           T L +L +C+    +  G+ +    +   KL    + +
Sbjct: 796 YAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHL 855

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           G   ++ +    G L  A   + ++   +D   W+ ++ AC ++G
Sbjct: 856 G--CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 174/375 (46%), Gaps = 38/375 (10%)

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++L   K IH   LK+G     +  N ++ +Y+ CG++  A     R+    D   WN V
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRL-EKKDVFAWNSV 113

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +     +G F   +++F  M   +   P+  T   V+SAC  L+    G+ +H    K+ 
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHE-VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
            G  +  Q  LI MY +CR ++ A  VF+   N +  +W  +I+ + ++   + A+++F 
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            ++     P++I++V++++A   LG L   +++   + +                     
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN--------------------P 272

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +  AW+ MIS +   G   EAI  F E+  +G++ T+SS+ S+LSA +   +++     Y
Sbjct: 273 NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLN-----Y 327

Query: 679 NNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +M+     +   + +V     +V+M  +  K+  A +   +L  +    +W AML   +
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG-ERNIVLWNAMLGGFA 386

Query: 735 HHGDTKMGKQVAELL 749
            +G   + ++V E  
Sbjct: 387 QNG---LAQEVMEFF 398


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 220/798 (27%), Positives = 406/798 (50%), Gaps = 46/798 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   TSL+  Y      E +  +F +   +DVV+W +MI   V++   V  L  F
Sbjct: 133 GLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELF 192

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+  +  T    +SA   +  +  G+++H   ++ G  +D  +    VNMY KC
Sbjct: 193 HRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKC 252

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSA 180
           G L  +   F  M   +TVSWN I++ C  +    + L YF+ M   G    D V+  + 
Sbjct: 253 GSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITI 312

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +    L++G++++   ++ GY+   ++ V N +++MYS CG I+ A   F  M  +
Sbjct: 313 LNACSSPATLTFGELLYECILQCGYD--THLIVGNCIMTMYSSCGRIDNAAAFFSTMVER 370

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D +SWN II G A  G  +EA  L   M L   + PD  T +++I   A    ++E + +
Sbjct: 371 DAISWNTIISGHAQAGFCDEAVHLFRRM-LAEGITPDKFTFISIIDGTAR---MQEAKIL 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
               +   +  D+ ++++L++ +S+  ++ +A  LF+ +    D+V W S+IS   +   
Sbjct: 427 SELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKD-RDIVMWTSIISSYVQHGS 485

Query: 358 -EMLYLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            +    C++         +  TL+  L +C S  +L  GK IH   ++ GF+ +    NA
Sbjct: 486 SDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNA 545

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG L  A  +  +   N     WN +  A  Q   ++EA++ F+ M Q +   
Sbjct: 546 LINMYAKCGCLEEADLVFHQCGKN--LVSWNTIAAAYVQRDKWREALQLFQEM-QLEGLK 602

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D V+ V V++ C +   A EG  +H + L++ M  D  V  AL+ MY   + +  AS +
Sbjct: 603 ADKVSFVTVLNGCSS---ASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRI 659

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA--CTQLG 583
           F      ++ +WN MI+  +++     A+++F+ ++ E   P++IS V++L+A   +   
Sbjct: 660 FSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPS 719

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L+  + +   +   G++ ++ + +A++ M+                  +  A+W+ +++
Sbjct: 720 SLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVT 779

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           A+  HG+  +A++LF  M     RP   +++S+LSACSH GL++EG  ++ +M  E+ + 
Sbjct: 780 AHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSMGREFGIA 839

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
              EH+ C+VD+L R+G+L +A E ++ +P+     +W  +LSAC   GD K  K+VAE 
Sbjct: 840 GSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVAER 899

Query: 749 LFKLEPENVGYYISLSNM 766
           + +L+P     Y+ LS++
Sbjct: 900 VMELDPRRPAAYVVLSSV 917



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 195/723 (26%), Positives = 353/723 (48%), Gaps = 59/723 (8%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T L ++    + + + +GR VH     +    D  + N  ++MY KCG +  +   F
Sbjct: 1   DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +     VSWN++++    +   ++    F+ M   G   D ++  + +      G+LS
Sbjct: 61  QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK++H   ++ G E +  V V  SLI MY +CG +E A R F  +  +DVVSW ++I  
Sbjct: 121 RGKLLHGFVLEAGLERN--VMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMT 178

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  + +  EA +L H M+    V P+  T  T IS CA    + +G+ +H   +      
Sbjct: 179 YVQHDRCVEALELFHRMR-PSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFES 237

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF 366
           D+++  ++++ Y K  SL  A  +F  + P  + VSWN++++     G   E L+   + 
Sbjct: 238 DVVVSCAIVNMYGKCGSLEDAREVFERM-PHPNTVSWNAIVAACTQHGCCVEALWYFQRM 296

Query: 367 SFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG- 417
                      T + IL +C+SP +L FG+ ++   L+ G+  + I  N +M MY +CG 
Sbjct: 297 QLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGR 356

Query: 418 -DLVAAF--SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            D  AAF  ++++R     D   WN +I    Q G   EA+  F+ M   +  +PD  T 
Sbjct: 357 IDNAAAFFSTMVER-----DAISWNTIISGHAQAGFCDEAVHLFRRML-AEGITPDKFTF 410

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           +++I     ++   E K L  L ++S + LD  + +ALI M+ R  +++ A ++F+   +
Sbjct: 411 ISIIDGTARMQ---EAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKD 467

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            ++  W  +IS++ Q+ +   AL   R +  E    N+ ++V+ L+AC  L  L  GK I
Sbjct: 468 RDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLI 527

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGW 637
           H H    GF  +  + +AL++MY+ C              K+  +W+++ +AY    K  
Sbjct: 528 HSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGKNLVSWNTIAAAYVQRDKWR 587

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-- 695
           EA++LF EM   G++  K S +++L+ CS +    EG + +N +LE      E++H V  
Sbjct: 588 EALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGSKIHNILLE---TGMESDHIVST 641

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            +++M   S  L EA      +  +     W AM++  + HG   + ++  ++  +++ E
Sbjct: 642 ALLNMYTASKSLDEASRIFSRMEFRDIVS-WNAMIAGKAEHG---LSREAIQMFQRMQLE 697

Query: 756 NVG 758
            V 
Sbjct: 698 GVA 700



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 197/776 (25%), Positives = 368/776 (47%), Gaps = 57/776 (7%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y      E ++ +F    +   V+WN+++ A   +         F  M  +G+  D  T 
Sbjct: 47  YGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITF 106

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           + ++   T    L +G+++H   ++AG+  +  +    + MY KCG +  +   F  +  
Sbjct: 107 VTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLAL 166

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            D VSW +++   + ++   + L  F  M  SG   + ++ ++A++A A +  ++ GK+I
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLI 226

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H+  ++ G+E    V V+ ++++MY +CG +E A   F  M   + VSWNAI+     +G
Sbjct: 227 HSQVLEDGFESD--VVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHG 284

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LL 314
              EA      MQL     PD  T +T+++ C+    L  G  ++   ++   GYD  L+
Sbjct: 285 CCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQ--CGYDTHLI 342

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML-- 360
           + N +M  YS    +  A   F+ +    D +SWN++ISG            LF+ ML  
Sbjct: 343 VGNCIMTMYSSCGRIDNAAAFFSTMVE-RDAISWNTIISGHAQAGFCDEAVHLFRRMLAE 401

Query: 361 -YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                +F+F +++      +    ++  K +    ++ G   +   V+AL++M+   G++
Sbjct: 402 GITPDKFTFISII------DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYGNV 455

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A SL   +  + D   W  +I +  Q+G   +A+   + M + +    +  TLV  ++
Sbjct: 456 REARSLFDDMK-DRDIVMWTSIISSYVQHGSSDDALGCTRLM-RLEGLMGNDFTLVTALN 513

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L    EGK +H  A++        V NALI MY +C  ++ A  VF  C   NL +
Sbjct: 514 ACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGK-NLVS 572

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN + +A+ Q      AL+LF+ ++ E    +++S V++L+ C+       G +IH  + 
Sbjct: 573 WNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSAS---EGSKIHNILL 629

Query: 597 HLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIE 641
             G + +  +S+ALL+MY+  KS                 +W++MI+    HG   EAI+
Sbjct: 630 ETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQ 689

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVD-EGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +F  M   G+ P K S +++L+A S S     +  +    ++ +     +T     IV M
Sbjct: 690 MFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVSM 749

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
            GRSG+L EA    + +  +     W  +++A + HG+    +Q  +L  +++ E+
Sbjct: 750 FGRSGRLAEARRAFERIR-ERDAASWNVIVTAHAQHGEV---EQALKLFRRMQQES 801



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 287/600 (47%), Gaps = 79/600 (13%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V N+ I MY +CG +E A   F  +     VSWN+++  FA +G+F++AF +   M+L +
Sbjct: 39  VQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKL-Q 97

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            + PD  T VT++  C  +  L  G+ +HG+ +   L  ++++  SL+  Y K   +  A
Sbjct: 98  GLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDA 157

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFSTLL-------AILPSCNS 380
             +F+ +A + D+VSW SMI    +     E L L  +   S +L         + +C  
Sbjct: 158 RRVFDKLA-LQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAH 216

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            ES+  GK IH   L+ GF ++ +   A+++MY  CG L  A  + +R+ H  +T  WN 
Sbjct: 217 VESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPH-PNTVSWNA 275

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           ++ ACTQ+G   EA+  F+ M  Q  ++PD VT + +++AC +      G+ L+   L+ 
Sbjct: 276 IVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQC 335

Query: 501 LMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
             G DT   V N ++TMY  C  I +A+  F +    +  +WN +IS  +Q      A+ 
Sbjct: 336 --GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVH 393

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM-- 613
           LFR +  E   P++ + +SI+    ++   +  K +   +   G + + F+ SAL++M  
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARM---QEAKILSELMVESGVELDVFLVSALINMHS 450

Query: 614 -YSNCKSNAA------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            Y N +   +            W+S+IS+Y  HG   +A+     M   G+     ++++
Sbjct: 451 RYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVT 510

Query: 661 LLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            L+AC+    + EG   +++ +E  +   P   +   +++M  + G L+EA         
Sbjct: 511 ALNACASLTALSEGKLIHSHAIERGFAASPAVGN--ALINMYAKCGCLEEA--------- 559

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
                                      +L+F    +N+  + +++  YV   +W++A+++
Sbjct: 560 ---------------------------DLVFHQCGKNLVSWNTIAAAYVQRDKWREALQL 592



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G+        ++++ +        +   F     +D  +WN ++TA  ++  V   L  
Sbjct: 734 QGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVIVTAHAQHGEVEQALKL 793

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI--KAGMIADSSLCNVFVNMY 118
           F  M +E  R DS TL+ ++SA +    +++G   H  S+  + G+          V++ 
Sbjct: 794 FRRMQQESSRPDSITLVSVLSACSHGGLIEEG-YYHFTSMGREFGIAGSQEHYGCVVDLL 852

Query: 119 AKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           A+ G L+ +E     M   A  V W T++S C
Sbjct: 853 ARAGRLDQAEELLRKMPVPASYVLWMTLLSAC 884


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 239/788 (30%), Positives = 384/788 (48%), Gaps = 44/788 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L     L+ AYS     + S  +F    +  VV WN+MI            L FFG M E
Sbjct: 33  LKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSE 92

Query: 67  E-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           E GI  D  +    + A       K+G  +H L  + G+ +D  +    V MY K  DL 
Sbjct: 93  EKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLV 152

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           S+   F  MH  D V+WNT++SG   N      LL F +M       D+VSL + + A +
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L +    + +H L IK G+      + ++ LI MY  C D+ AAE  F  +  KD  SW
Sbjct: 213 KLEKSDVCRCLHGLVIKKGF----IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSW 268

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGY 303
             ++  +A NG FEE  +L     LMR+ +  +  V    +L A + +  L +G ++H Y
Sbjct: 269 GTMMAAYAHNGFFEEVLELF---DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+++ L  D+ +  SLM  YSK   L  AE LF  I    D+VSW++MI+          
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDE 384

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF++M+ +  + +  TL ++L  C    +   GKSIHC+ +K    +      A++ 
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG    A    +R+    D   +N +    TQ G   +A   +K+M +     PDS
Sbjct: 445 MYAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKAFDVYKNM-KLHGVCPDS 502

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T+V ++  C        G  ++G  +K     +  V +ALI M+ +C  + +A  +F+ 
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562

Query: 532 C-YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
           C +  +  +WN M++ +  +     A+  FR ++   F+PN ++ V+I+ A  +L  LR 
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G  +H  +   GF   + + ++L+DMY+ C               K   +W++M+SAY  
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA 682

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG    A+ LF  M  + ++P   S +S+LSAC H+GLV+EG + +  M E + +  E E
Sbjct: 683 HGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE 742

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LG++G   EA E ++ + ++   GVWGA+L++   H +  +       L KL
Sbjct: 743 HYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKL 802

Query: 753 EPENVGYY 760
           EP N  +Y
Sbjct: 803 EPLNPSHY 810



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 194/405 (47%), Gaps = 21/405 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G +  +  +TSL++ YS     E +  LF    ++DVV+W+AMI +  +       +  
Sbjct: 329 QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISL 388

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+   I+ ++ TL  ++     +   + G+ +HC +IKA + ++       ++MYAK
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG  + +   F  +   D V++N +  G        K    ++ M   G   D+ ++   
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGM 508

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC- 239
           +   A   + + G  ++   IK G++   +V+  ++LI+M+++C  + AA   F    C 
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVA--HALINMFTKCDALAAAIVLF--DKCG 564

Query: 240 --KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K  VSWN +++G+ L+G+ EEA     +M++ +  +P+  T V ++   A+   LR G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAELSALRVG 623

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
            SVH   I+        + NSL+D Y+K   +  +E  F  I+    +VSWN+M+S    
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN-KYIVSWNTMLSAYAA 682

Query: 358 EMLYLCSQFSFSTL------------LAILPSCNSPESLEFGKSI 390
             L  C+   F ++            L++L +C     +E GK I
Sbjct: 683 HGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L+ ++  C N     +   +HG    SL+    +  N LI  Y   +    +  +F+S  
Sbjct: 8   LLLMLRECKNFRCLLQ---VHG----SLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVR 60

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGK 589
           +  +  WN MI  +++      AL  F ++      +P++ S    L AC      + G 
Sbjct: 61  DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120

Query: 590 QIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHG 634
           +IH  +  +G + + +I +AL++MY                + K    W++M+S    +G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
               A+ LFH+M +  +     S+ +L+ A S
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 228/742 (30%), Positives = 371/742 (50%), Gaps = 54/742 (7%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           L+ ++ A      L QGR +H   +  G+  +  L N  + +Y KC  L   E  FS + 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             D  SW TI++    +   ++ +  F  M   G + D V+  + + A A LG+LS G+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHA  ++ G +    ++  N L+ +Y  CG + +A   F  M  +D+VSWNA I   A +
Sbjct: 150 IHAWIVESGLKGKSVLA--NLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQS 206

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G    A +L   MQL   V P   T+V  +++CA    +R+ +++H       L   L++
Sbjct: 207 GDLGIALELFQRMQL-EGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVV 262

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
             +L   Y++   L +A+ +F+  A   D+VSWN+M+              LF  ML+  
Sbjct: 263 STALASAYARLGHLYQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG 321

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              S  TL+     C+S   L FG+ IH   L+ G   + +  NAL+ MY  CG    A 
Sbjct: 322 ISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG- 482
            L +RI  N+ +  WN +I   +Q G  + A++ F+ M Q +  +P   T +N++ A   
Sbjct: 379 HLFKRIPCNAVS--WNTMIAGSSQKGQMKRAVELFQRM-QLEGMAPVRATYLNLLEAVAS 435

Query: 483 NLELAF---EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY---NCN 536
           N E A    EG+ LH   +      +  +  A++ MY  C  I  A+  F+        +
Sbjct: 436 NPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           + +WN +IS+ SQ+    RAL  FR ++     PN+I+ V++L AC     L  G+ +H 
Sbjct: 496 VVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHD 555

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAA----------------WSSMISAYGYHGKGW 637
           H+ H G + N F+++AL  MY  C S  +                +++MI+AY  +G   
Sbjct: 556 HLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAG 615

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EA++LF  M   G RP + S +S+LSACSH GL DEG + + +M + Y + P  +H+ C 
Sbjct: 616 EALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACA 675

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G L +A E I+ + ++P   VW  +L AC  + D   G+    ++ +L+P + 
Sbjct: 676 VDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDE 735

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
             Y+ LSN+    G+W +A E+
Sbjct: 736 SAYVVLSNILAGAGKWDEAAEV 757



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 206/699 (29%), Positives = 338/699 (48%), Gaps = 55/699 (7%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D  +W  +ITA  E+      +  F  M +EG+R D+ T L ++ A  ++  L QGR +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +++G+   S L N+ +++Y  CG + S+   F  M   D VSWN  ++    +   
Sbjct: 151 HAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDL 209

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
              L  F+ M   G +   ++L   +A + C   +   + IH +  + G E +  VS   
Sbjct: 210 GIALELFQRMQLEGVRPARITL--VIALTVC-ATIRQAQAIHFIVRESGLEQTLVVS--T 264

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L S Y++ G +  A+  F     +DVVSWNA++  +A +G   EA  L   M L   + 
Sbjct: 265 ALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM-LHEGIS 323

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   T+V   + C+    LR GR +HG A+ + L  D+++ N+L+D Y++  S  +A  L
Sbjct: 324 PSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS-PE 382
           F  I P N  VSWN+MI+G            LF+ M         +T L +L +  S PE
Sbjct: 381 FKRI-PCN-AVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 383 ---SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR--ISHNSDTSC 437
              ++  G+ +H   +  G+++      A++ MY +CG +  A +  QR  +    D   
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I + +Q+GH + A+  F+ M      +P+ +T V V+ AC       EG+ +H   
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL 557

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTWNCMISAFSQNKAEVRA 556
             S M  +  V  AL +MYGRC  ++SA  +FE      ++  +N MI+A+SQN     A
Sbjct: 558 RHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEA 617

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L+LF  ++ E   P+E S VS+LSAC+           HG +   G++    I  ++   
Sbjct: 618 LKLFWRMQQEGSRPDEQSFVSVLSACS-----------HGGLADEGWE----IFRSMRQS 662

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           Y    S   ++  +   G  G   +A EL   M    ++PT     +LL AC     VD 
Sbjct: 663 YGIAPSEDHYACAVDVLGRAGWLADAEELIRCM---DVKPTVLVWKTLLGACRKYRDVDR 719

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           G +  N+M+ E D   E+  +V + ++L  +GK  EA E
Sbjct: 720 G-RLANSMVRELDPGDESA-YVVLSNILAGAGKWDEAAE 756



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 234/490 (47%), Gaps = 41/490 (8%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           +S  L +E   +D+V+WNA I A  ++  + + L  F  M  EG+R    TL+I   ALT
Sbjct: 180 ASAMLLFEKMERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVI---ALT 236

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
               ++Q + +H +  ++G+     +     + YA+ G L  ++  F      D VSWN 
Sbjct: 237 VCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNA 296

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++     + +  +  L F  M   G     V+L   V AS     L +G++IH   ++ G
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCSSLRFGRMIHGCALEKG 353

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            +    + + N+L+ MY++CG  E A   F  + C + VSWN +I G +  G+ + A +L
Sbjct: 354 LDRD--IVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVEL 410

Query: 265 LHEMQLMRSVEPDIATVVTLISLCA----DSLLLREGRSVH------GYAIRRLLGYDLL 314
              MQL   + P  AT + L+   A    ++  + EGR +H      GYA    +G  ++
Sbjct: 411 FQRMQL-EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVV 469

Query: 315 MMNSLMDFYSKSNSLSKAELLFN--AIAPMNDLVSWNSMIS------------GLFKEML 360
            M      Y+   ++ +A   F   A+   +D+VSWN++IS            G F+ M 
Sbjct: 470 KM------YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 +  T +A+L +C    +L  G+ +H      G  +N     AL  MY  CG L 
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLE 583

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +A  + ++++   D   +N +I A +QNG   EA+K F  M QQ+ + PD  + V+V+SA
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRM-QQEGSRPDEQSFVSVLSA 642

Query: 481 CGNLELAFEG 490
           C +  LA EG
Sbjct: 643 CSHGGLADEG 652



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 230/495 (46%), Gaps = 44/495 (8%)

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
           A +V L+    D  LL +GR +H   +   LG +  + N L+  Y K  SL   E +F+ 
Sbjct: 30  AHLVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEEVFSR 87

Query: 339 IAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           +  + D  SW ++I+            G+F  M     +    T LA+L +C     L  
Sbjct: 88  L-EVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G+SIH W ++ G    ++  N L+H+Y +CG + +A  L +++    D   WN  I A  
Sbjct: 147 GRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMER--DLVSWNAAIAANA 204

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           Q+G    A++ F+ M Q +   P  +TLV  ++ C  +  A   +++H +  +S +    
Sbjct: 205 QSGDLGIALELFQRM-QLEGVRPARITLVIALTVCATIRQA---QAIHFIVRESGLEQTL 260

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            V  AL + Y R   +  A  VF+     ++ +WN M+ A++Q+     A  LF  +  E
Sbjct: 261 VVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS------- 619
               S V++++A T    LR G+ IHG     G   +  + +ALLDMY+ C S       
Sbjct: 321 GISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHL 380

Query: 620 ------NA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS----HS 668
                 NA +W++MI+     G+   A+ELF  M   G+ P +++ ++LL A +     +
Sbjct: 381 FKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440

Query: 669 GLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-- 725
             + EG + ++ ++   Y   P       +V M    G + EA    +   ++ +  V  
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAI--GTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 726 WGAMLSACSHHGDTK 740
           W A++S+ S HG  K
Sbjct: 499 WNAIISSLSQHGHGK 513



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 247/540 (45%), Gaps = 42/540 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ST+L +AY+ + +   +  +F     +DVV+WNAM+ A  ++  +      F
Sbjct: 255 GLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EGI   S + + +V+A T  + L+ GR++H  +++ G+  D  L N  ++MY +C
Sbjct: 315 ARMLHEGI---SPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRC 371

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLS 178
           G    +   F  + C + VSWNT+++G       ++ +  F+ M   G +  +A  ++L 
Sbjct: 372 GSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLL 430

Query: 179 SAVAASACLGE-LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            AVA++      ++ G+ +H+  +  GY   P  ++  +++ MY+ CG I+ A  +F   
Sbjct: 431 EAVASNPEEARAMAEGRKLHSRIVSCGYASEP--AIGTAVVKMYASCGAIDEAAASFQRG 488

Query: 238 TCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +   DVVSWNAII   + +G  + A      M L   V P+  T V ++  CA +  L
Sbjct: 489 AMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDL-HGVAPNQITCVAVLDACAGAAAL 547

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            EG  VH +     +  +L +  +L   Y +  SL  A  +F  +A   D+V +N+MI+ 
Sbjct: 548 TEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKSIHCWQLKLG 398
                       LF  M    S+    + +++L +C+    + E  E  +S+   +   G
Sbjct: 608 YSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSM---RQSYG 664

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
            + +       + +    G L  A  L++ +        W  ++ AC +        +  
Sbjct: 665 IAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRG-RLA 723

Query: 459 KSMTQQQNASPDS--VTLVNVISACGNLELA------FEGKSLHGLALKSLMGLDTRVQN 510
            SM ++ +   +S  V L N+++  G  + A       E + L   A KS + + +RV  
Sbjct: 724 NSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHE 783


>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
 gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
          Length = 779

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 227/763 (29%), Positives = 386/763 (50%), Gaps = 43/763 (5%)

Query: 38  VVTWNAMITACVENRC-VVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           V  W+A++ A   +    V  L  +  M  EG+R DS T +  + A T    L  GR VH
Sbjct: 23  VAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSVTFVTCLKACTVEGALGDGRKVH 82

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYP 155
               + G+  D    N  +NMY KC     +   FS M   + VSW +++     + +  
Sbjct: 83  AHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLG 142

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
            + +L FR+M   G + + +++ + +   AC   L+ G+ +H   ++ G   S   S+ N
Sbjct: 143 RESVLLFRKMELEGIRPNLITMVAVL--RAC--NLTDGRQVHGYVLEAGM--SLDTSLGN 196

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY + G ++ A+     M  +DV+SWN +I G+A +G  +E    L  MQ    + 
Sbjct: 197 ALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQ-QDGLS 255

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   T  TL++ C+    L EG+S+H   +   L  D ++ + L+  Y K  SL   +  
Sbjct: 256 PTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRS 315

Query: 336 FNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPES 383
              +   N  ++WN++I               F++M     +    T + +L +C+SP  
Sbjct: 316 SCEVHERN-TIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAH 374

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G  +H W  +LGF  + I  N+L  MY  CG L AA  + + +   +  S WN ++ 
Sbjct: 375 LAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVS-WNSLMS 432

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A  Q+G   +A K F+ M + + + PD VT ++++ AC     A EG S+H + ++S   
Sbjct: 433 AAIQHGCHADAHKFFQRM-KLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFD 491

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
             T V NALI MY +  D ++A  VF++    N  +WN +++A+ +      A+E+F  +
Sbjct: 492 KRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM 551

Query: 564 EFEPNEISIVSILSACTQL-GVLRHGKQIHGHVFHLGFQE--NSFISSALLDMYSNC--- 617
           +   ++++ V+ L AC+ L G L HGK IHG++   GF    ++  ++AL++MY  C   
Sbjct: 552 DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSL 611

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W+S+I AY  H +  +A++L   M   G++      +S+LS C
Sbjct: 612 QEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSILSGC 671

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
            HSGL++EG +Y+ +M+++Y + P  EH+ CI+D+LGR+G L  A + +  LP +    V
Sbjct: 672 DHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKV 731

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           W  +L+AC  HG+ + GK+ A  +  L+P     Y+ LSN+Y 
Sbjct: 732 WMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIYT 774



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 188/682 (27%), Positives = 334/682 (48%), Gaps = 66/682 (9%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNV 175
           MY KCGDL+++   F  +      +W+ ++    ++ N   + L  ++ M   G + D+V
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALLGAYANSENDAVQALELYKRMQLEGVRPDSV 60

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +  + + A    G L  G+ +HA   +LG E   Y +  N+LI+MY +C   E A + F 
Sbjct: 61  TFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAA--NALINMYGKCRSPEDAFQLFS 118

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M   +VVSW ++I  FA  G       LL     +  + P++ T+V ++  C     L 
Sbjct: 119 RMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACN----LT 174

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
           +GR VHGY +   +  D  + N+L+D Y K+  + +A+++   + P  D++SWN MISG 
Sbjct: 175 DGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREM-PKRDVISWNIMISGY 233

Query: 356 FK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            +          L+   Q   S    T   +L +C+S E L  GKSIH   + +G   + 
Sbjct: 234 AQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDE 293

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRIS---HNSDTSCWNIVIVACTQ-NGHFQEAIKTFK 459
           +  + L+ MY  CG L      ++R S   H  +T  WN +I A  + + HFQ A+++F+
Sbjct: 294 VVKSFLLGMYGKCGSL----EDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQ-ALRSFQ 348

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG----LALKSLMGLDTRVQNALITM 515
            M Q +    D+VT V ++  C +     +G  LH     L  +S++     V N+L  M
Sbjct: 349 QM-QLEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESII-----VHNSLTAM 402

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  + +A  +FE   + N  +WN ++SA  Q+     A + F+ ++ E   P+E++ 
Sbjct: 403 YAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTC 462

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
           +S+L ACT+    + G  IH  V   GF + + +++AL+ MY+                 
Sbjct: 463 ISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAE 522

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH-SGLVDEGLQ 676
           ++  +W+++++AY   G   +A+E+F +M    +   K + ++ L ACS  +G +  G  
Sbjct: 523 RNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDACSGLAGGLAHGKL 579

Query: 677 YYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
            +  ML+  +  R +T     +V+M G+ G LQEA +    + +      W +++ A + 
Sbjct: 580 IHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGM-LHRDVVTWTSLIVAYAQ 638

Query: 736 HGDTKMGKQVAELLFKLEPENV 757
           H +    +Q  +L+  +E E V
Sbjct: 639 HSEI---EQALKLVKIMEQEGV 657



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 253/521 (48%), Gaps = 22/521 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y      + +  +  E   +DV++WN MI+   ++     GL     M ++G+  
Sbjct: 197 ALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSP 256

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T   +++A +    L +G+ +H   +  G+  D  + +  + MY KCG L   + + 
Sbjct: 257 TKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSS 316

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +H  +T++WNTI+      +   + L  F++M   G +AD V+    +   +    L+
Sbjct: 317 CEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPAHLA 376

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G ++H    +LG+E    + V NSL +MY++CG ++AA + F  M  ++ VSWN+++  
Sbjct: 377 QGILLHDWISQLGFES---IIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSA 433

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G   +A      M+L  S  PD  T ++++  C      +EG S+H   +      
Sbjct: 434 AIQHGCHADAHKFFQRMKLEGS-RPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDK 492

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF 366
              + N+L+  Y+K      A  +F+A+A  N  VSWN++++     GL ++ + +  + 
Sbjct: 493 RTGVANALIFMYAKLGDHEAARNVFDAMAERN-TVSWNTILAAYVEKGLNRDAVEMFWKM 551

Query: 367 SFS----TLLAILPSCNS-PESLEFGKSIHCWQLKLGFSN--NTIGVNALMHMYINCGDL 419
             +    T +A L +C+     L  GK IH + L  GFSN  +T+   AL++MY  CG L
Sbjct: 552 DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSL 611

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   + H  D   W  +IVA  Q+   ++A+K  K M +Q+    D V  ++++S
Sbjct: 612 QEARKIFDGMLHR-DVVTWTSLIVAYAQHSEIEQALKLVKIM-EQEGVKVDDVVFLSILS 669

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGR 518
            C +  L  EG   + +++    G+  R++  N +I + GR
Sbjct: 670 GCDHSGLLEEG-CKYFVSMIDDYGISPRLEHYNCIIDVLGR 709



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 177/350 (50%), Gaps = 18/350 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL   Y+     +++  +F E  +++ V+WN++++A +++ C      FF  M  EG R 
Sbjct: 398 SLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRP 457

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + ++ A T+    K+G  +H + +++G    + + N  + MYAK GD  ++   F
Sbjct: 458 DEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVF 517

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAA-SACLGE 189
             M   +TVSWNTI++  +        +    EM W  + A D V+  +A+ A S   G 
Sbjct: 518 DAMAERNTVSWNTILAAYVEKGLNRDAV----EMFWKMDVARDKVTYVAALDACSGLAGG 573

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L++GK+IH   +  G+ +        +L++MY +CG ++ A + F GM  +DVV+W ++I
Sbjct: 574 LAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDGMLHRDVVTWTSLI 633

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGYA 304
             +A + + E+A  L+  M+    V+ D    ++++S C  S LL EG       +  Y 
Sbjct: 634 VAYAQHSEIEQALKLVKIME-QEGVKVDDVVFLSILSGCDHSGLLEEGCKYFVSMIDDYG 692

Query: 305 IR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           I  RL  Y     N ++D   ++  L  AE L + +   +D   W ++++
Sbjct: 693 ISPRLEHY-----NCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLA 737



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 182/416 (43%), Gaps = 65/416 (15%)

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVI--VACTQNGHFQEAIKTFKSMTQQQNASP 469
           MY  CGDL AA  +  ++      + W+ ++   A ++N   Q A++ +K M Q +   P
Sbjct: 1   MYGKCGDLDAASEVFGKLD-PLHVAAWSALLGAYANSENDAVQ-ALELYKRM-QLEGVRP 57

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSVT V  + AC       +G+ +H    +  +  D    NALI MYG+CR  + A  +F
Sbjct: 58  DSVTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLF 117

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVR-ALELFRHLEFE---PNEISIVSILSACTQLGVL 585
               + N+ +W  +I  F+Q     R ++ LFR +E E   PN I++V++L AC     L
Sbjct: 118 SRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACN----L 173

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA-----------------AWSSMIS 628
             G+Q+HG+V   G   ++ + +AL+DMY  CK+                   +W+ MIS
Sbjct: 174 TDGRQVHGYVLEAGMSLDTSLGNALVDMY--CKTGGVDEADVVLREMPKRDVISWNIMIS 231

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-----------HSGLVDEGLQY 677
            Y   G   E +     M   G+ PTK +  +LL+ACS           H  +VD GL  
Sbjct: 232 GYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDR 291

Query: 678 -----------YNNMLEEYDV-RPETEHH----VCIVDMLGRSGKLQEAYEFIKNLPIQP 721
                      Y       DV R   E H    +    ++G   +  + ++ +++     
Sbjct: 292 DEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQ 351

Query: 722 KPGVWGA------MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
             GV         ML  CS       G  + + + +L  E++  + SL+ MY   G
Sbjct: 352 LEGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESIIVHNSLTAMYAKCG 407



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 21/294 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      + +L+  Y+ +   E++  +F     ++ V+WN ++ A VE       +  F
Sbjct: 489 GFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMF 548

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGM--IADSSLCNVFVNMY 118
            +M    +  D  T +  + A + +   L  G+++H   +  G     D+      VNMY
Sbjct: 549 WKM---DVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMY 605

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            KCG L  +   F GM   D V+W +++     ++  E+ L   + M   G + D+V   
Sbjct: 606 GKCGSLQEARKIFDGMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFL 665

Query: 179 SAVAASACLGELSYG-----KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           S ++     G L  G      +I   GI      SP +   N +I +  + G ++ AE+ 
Sbjct: 666 SILSGCDHSGLLEEGCKYFVSMIDDYGI------SPRLEHYNCIIDVLGRAGHLDLAEKL 719

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              +  + D   W  ++    ++G  E        + L+   +P I     ++S
Sbjct: 720 VDRLPSRSDSKVWMTLLAACRMHGNPERGKRAARRITLL---DPSIPAAYVVLS 770


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 228/803 (28%), Positives = 397/803 (49%), Gaps = 50/803 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGIR 70
           +++  Y+     E ++A+F     KDVV+W AM  A   E R     L  F EM+ + + 
Sbjct: 171 AMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL- 229

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             +  ++  ++AL     L+ G  +H L  +AG+  D    N  +NMY KCGD   +   
Sbjct: 230 --APNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGV 287

Query: 131 FSGMHCA---DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           F  M      D VSWN ++S  +        +  FR +   G + ++V+L + + A A  
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347

Query: 188 G-ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW 245
           G +    +  H    + GY     V V N++ISMY++CG   AA   F  +  K DV+SW
Sbjct: 348 GVDFGAARKFHGRIWESGYLRD--VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISW 405

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N ++        F +  +  H M L+  ++P+  + + +++ C++S  L  GR +H   +
Sbjct: 406 NTMLGASEDRKSFGKVVNTFHHM-LLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464

Query: 306 RRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISGLFKEMLYLC 363
            R   Y +  +   L+  Y K  S+++AEL+F  +  P   LV+WN M+    +      
Sbjct: 465 TRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDR--- 521

Query: 364 SQFSFSTLLAILPSCNSPESLEFGK---SIHCWQ---------LKLGFSNNTIGVNALMH 411
           S+ +F  L+ +L     P++L F     S +C Q         L+ G+ +  +   AL+ 
Sbjct: 522 SKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE-TALIS 580

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           M+  C +L  A S+   + H  D   W  ++ A  +N  F+E    F+ M Q +   PD 
Sbjct: 581 MHGRCRELEQARSVFDEMDHG-DVVSWTAMVSATAENRDFKEVHHLFRRM-QLEGVIPDK 638

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            TL   +  C +      GK +H    +  +  D  V+NAL+ MY  C D + A + FE+
Sbjct: 639 FTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFET 698

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               +L +WN M +A++Q      A+ LFRH++ E   P++++  + L+      ++  G
Sbjct: 699 MKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG 758

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC----------KSNAAWS-----SMISAYGYH 633
           K  HG     G   +  +++ L+ +Y+ C          +    W+     ++I A   H
Sbjct: 759 KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQH 818

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   EA+++F +M   G+RP  ++++S++SAC H+G+V+EG   +  M E + + P  EH
Sbjct: 819 GFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEH 878

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C VD+LGR+G+L+ A + I+ +P +    VW ++L  C   GD ++G++ A+ + +L+
Sbjct: 879 YACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELD 938

Query: 754 PENVGYYISLSNMYVALGRWKDA 776
           P N   ++ LSN+Y A G+WKDA
Sbjct: 939 PHNSAAHVVLSNIYCATGKWKDA 961



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 212/802 (26%), Positives = 377/802 (47%), Gaps = 66/802 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   HL     L+  Y      E + A+F +   ++VV+W A+I+A  ++         F
Sbjct: 55  GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALF 114

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS----LCNVFVN 116
             M +E     +S TL+ +++A      L  GR +H +  + G+  +S+    + N  +N
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMIN 174

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN---YPEKCLLYFREMGWSGEQAD 173
           MYAKCG    +   F  +   D VSW T M+G        YP+  L  FREM       +
Sbjct: 175 MYAKCGSPEDAIAVFLTIPEKDVVSW-TAMAGAYAQERRFYPD-ALRIFREMLLQPLAPN 232

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
            ++  +A+ A   L +   G  +H+L  + G    P     N+LI+MY +CGD E A   
Sbjct: 233 VITFITALGACTSLRD---GTWLHSLLHEAGLGFDPLAG--NALINMYGKCGDWEGAYGV 287

Query: 234 FWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-SLCA 289
           F  M  +   D+VSWNA+I      G+  +A  +   ++L   + P+  T++T++ +L A
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL-EGMRPNSVTLITILNALAA 346

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
             +     R  HG         D+++ N+++  Y+K    S A  +F  I    D++SWN
Sbjct: 347 SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWN 406

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-- 395
           +M+               F  ML      +  + +AIL +C++ E+L+FG+ IH   L  
Sbjct: 407 TMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTR 466

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEA 454
           +  +  +++    L+ MY  CG +  A  + + +   S +   WN+++ A  QN   +EA
Sbjct: 467 RRDYVESSVA-TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEA 525

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR-VQNALI 513
                 M  Q    PD+++  +V+S+C     + E + L    L+S  G  +  ++ ALI
Sbjct: 526 FGALMEML-QGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILES--GYRSACLETALI 579

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEI 570
           +M+GRCR+++ A +VF+   + ++ +W  M+SA ++N+       LFR ++ E   P++ 
Sbjct: 580 SMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKF 639

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           ++ + L  C     L  GK IH  V  +G + +  + +ALL+MYSNC             
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             +   +W+ M +AY   G   EA+ LF  M   G++P K +  + L+    S LV +G 
Sbjct: 700 KARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG- 758

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           + ++ +  E  +  +      +V +  + GKL EA    +    Q    +  A++ A + 
Sbjct: 759 KLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRG-ACQWTVVLLNAIIGALAQ 817

Query: 736 HGDTKMGKQVAELLFKLEPENV 757
           HG     ++  ++ +K++ E V
Sbjct: 818 HG---FSEEAVKMFWKMQQEGV 836



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 200/751 (26%), Positives = 342/751 (45%), Gaps = 73/751 (9%)

Query: 68  GIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
            +R D    L   +AL Q     N L +G+  H L   AG+     L N  +NMY +CG 
Sbjct: 16  AVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGS 75

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVA 182
           L  +   FS M   + VSW  ++S    +    +    FR M      A N  +L + + 
Sbjct: 76  LEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLN 135

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGDIEAAERAFWGMTCK 240
           A A   +L+ G+ IHA+  +LG E     +  V N++I+MY++CG  E A   F  +  K
Sbjct: 136 ACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEK 195

Query: 241 DVVSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           DVVSW A+   +A   +F  +A  +  EM L++ + P++ T +T +  C     LR+G  
Sbjct: 196 DVVSWTAMAGAYAQERRFYPDALRIFREM-LLQPLAPNVITFITALGACTS---LRDGTW 251

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN--DLVSWNSMIS---- 353
           +H       LG+D L  N+L++ Y K      A  +F A+A     DLVSWN+MIS    
Sbjct: 252 LHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVE 311

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG--KSIHCWQLKLGFSNNT 403
                    +F+ +     + +  TL+ IL +  +   ++FG  +  H    + G+  + 
Sbjct: 312 AGRHGDAMAIFRRLRLEGMRPNSVTLITILNAL-AASGVDFGAARKFHGRIWESGYLRDV 370

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +  NA++ MY  CG   AA+++ +RI    D   WN ++ A      F + + TF  M  
Sbjct: 371 VVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML- 429

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG-LDTRVQNALITMYGRCRDI 522
                P+ V+ + +++AC N E    G+ +H L L      +++ V   L++MYG+C  I
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSI 489

Query: 523 KSASTVFES--CYNCNLCTWNCMISAFSQNKAEVRAL-ELFRHLE--FEPNEISIVSILS 577
             A  VF+     + +L TWN M+ A++QN     A   L   L+    P+ +S  S+LS
Sbjct: 490 AEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 578 AC---TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---------------S 619
           +C    +  VLR        +   G++ ++ + +AL+ M+  C+                
Sbjct: 550 SCYCSQEAQVLRMC------ILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGD 602

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W++M+SA   +    E   LF  M   G+ P K ++ + L  C  S  +  G +  +
Sbjct: 603 VVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG-KIIH 661

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
             + E  +  +      +++M    G  +EA  F + +  +     W  M +A +  G  
Sbjct: 662 ACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS-WNIMSAAYAQAGLA 720

Query: 740 KMGKQVAELLFK------LEPENVGYYISLS 764
           K     A LLF+      ++P+ + +  +L+
Sbjct: 721 KE----AVLLFRHMQLEGVKPDKLTFSTTLN 747



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 166/344 (48%), Gaps = 6/344 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L++ +      E + ++F E  + DVV+W AM++A  ENR      H F  M  EG+ 
Sbjct: 576 TALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVI 635

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL   +        L  G+++H    + G+ AD ++ N  +NMY+ CGD   +   
Sbjct: 636 PDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D VSWN + +        ++ +L FR M   G + D ++ S+ +  S     +
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALV 755

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S GK+ H L  + G +    VSV   L+ +Y++CG ++ A   F G     VV  NAII 
Sbjct: 756 SDGKLFHGLAAESGLDSD--VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIG 813

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             A +G  EEA  +  +MQ    V PD+AT+V++IS C  + ++ EG S     ++   G
Sbjct: 814 ALAQHGFSEEAVKMFWKMQ-QEGVRPDVATLVSIISACGHAGMVEEGCSSF-LTMKEYFG 871

Query: 311 YDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               + +    +D   ++  L  AE +   +   ++ + W S++
Sbjct: 872 ISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 2/259 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +    +LL  YSN   +  +L+ F     +D+V+WN M  A  +       +  F
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D  T    ++       +  G++ H L+ ++G+ +D S+    V +YAKC
Sbjct: 728 RHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC 787

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F G      V  N I+     + + E+ +  F +M   G + D  +L S +
Sbjct: 788 GKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSII 847

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A    G +  G     L +K  +  SP +      + +  + G +E AE+    M  +D
Sbjct: 848 SACGHAGMVEEG-CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906

Query: 242 -VVSWNAIIDGFALNGKFE 259
             + W +++    L G  E
Sbjct: 907 NTLVWTSLLGTCKLQGDAE 925


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/601 (32%), Positives = 328/601 (54%), Gaps = 44/601 (7%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+ MY +CGD++     F  ++   +  WN +I  ++ +G + E+ +L  +M L   ++
Sbjct: 190 KLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQM-LELGIK 248

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAE 333
           P+  T  +++   A    + EGR VHG   +  LG++    ++NSL+ FY     +  A+
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQVHGLICK--LGFNSYNTVVNSLISFYFVGRKVRCAQ 306

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            LF+ +    D++SWNSMISG            +F +ML        +T++ +  +C + 
Sbjct: 307 KLFDELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            +L  GK +H + +K    +  +  N  L+ MY  CGDL +A  + +R+   +  S W  
Sbjct: 366 GTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS-WTS 424

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLA 497
           +I    + G    AIK F  M + +   PD   + ++++AC   GNL+    GK +H   
Sbjct: 425 MITGYVREGLSDGAIKLFDEM-KSRGVVPDVYAVTSILNACAINGNLK---SGKIVHDYI 480

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            ++ +  ++ V NAL  MY +C  +K A  VF      ++ +WN MI  +++N     AL
Sbjct: 481 RENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEAL 540

Query: 558 ELFRHLEFE--PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            LF  ++ E  P+  ++  IL AC  L  L  G++IHG+    G+ E+ ++++A++DMY 
Sbjct: 541 TLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYV 600

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K   +W+ MI+ YG HG G EAI  F++M  +GI P + S IS
Sbjct: 601 KCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFIS 660

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +L ACSHSGL+DEG + +N M +E  + P  EH+ C+VD+L R+G L +A++FIK +PI+
Sbjct: 661 ILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIK 720

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIG 780
           P   +WGA+L  C  H D K+ ++VAE +F+LEPEN GYY+ L+N+Y    +W++  ++ 
Sbjct: 721 PDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLR 780

Query: 781 K 781
           K
Sbjct: 781 K 781



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 263/538 (48%), Gaps = 25/538 (4%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD      I+    +   ++ GR V  +   +G++ D  L    V MY KCGDL      
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMV 207

Query: 131 FSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           F  +  +    WN ++S      NY E   L F++M   G + ++ + SS +   A +  
Sbjct: 208 FDKLSESKIFLWNLMISEYSGSGNYGESINL-FKQMLELGIKPNSYTFSSILKCFAAVAR 266

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G+ +H L  KLG+  + Y +V NSLIS Y     +  A++ F  +T +DV+SWN++I
Sbjct: 267 VEEGRQVHGLICKLGF--NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMI 324

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RL 308
            G+  NG  +   ++  +M L+  V+ D+AT+V +   CA+   L  G+ +H Y+I+   
Sbjct: 325 SGYVKNGLDDRGIEIFIKM-LVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  ++   N+L+D YSK   L+ A  +F  +     +VSW SMI+G            LF
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE-KTVVSWTSMITGYVREGLSDGAIKLF 442

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM           + +IL +C    +L+ GK +H +  +     N+   NAL  MY  C
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  +   +    D   WN +I   T+N    EA+  F  M  Q+ + PD  T+  
Sbjct: 503 GSMKDAHDVFSHM-KKKDVISWNTMIGGYTKNSLPNEALTLFAEM--QRESKPDGTTVAC 559

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +L    +G+ +HG AL++    D  V NA++ MY +C  +  A ++F+   N +
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKD 619

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
           L +W  MI+ +  +     A+  F  +     EP+E+S +SIL AC+  G+L  G +I
Sbjct: 620 LVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKI 677



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 291/636 (45%), Gaps = 49/636 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
             L+  Y      +    +F +     +  WN MI+    +      ++ F +M+E GI+
Sbjct: 189 VKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIK 248

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T   I+     +  +++GR VH L  K G  + +++ N  ++ Y     +  ++  
Sbjct: 249 PNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKL 308

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D +SWN+++SG + N   ++ +  F +M   G   D  ++ +   A A +G L
Sbjct: 309 FDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTL 368

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GKV+H+  IK    D   V   N+L+ MYS+CGD+ +A R F  M  K VVSW ++I 
Sbjct: 369 LLGKVLHSYSIKAATLDRE-VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMIT 427

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+   G  + A  L  EM+  R V PD+  V ++++ CA +  L+ G+ VH Y     L 
Sbjct: 428 GYVREGLSDGAIKLFDEMK-SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            +  + N+L D Y+K  S+  A  +F+ +    D++SWN+MI G            LF E
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKK-KDVISWNTMIGGYTKNSLPNEALTLFAE 545

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M    S+   +T+  ILP+C S  +L+ G+ IH + L+ G+S +    NA++ MY+ CG 
Sbjct: 546 MQRE-SKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGL 604

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           LV A SL   I  N D   W ++I     +G+  EAI TF  M +     PD V+ ++++
Sbjct: 605 LVLARSLFDMIP-NKDLVSWTVMIAGYGMHGYGSEAINTFNQM-RMTGIEPDEVSFISIL 662

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC +  L  EG  +  +  K                              E     NL 
Sbjct: 663 YACSHSGLLDEGWKIFNIMKK------------------------------ECQIEPNLE 692

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            + CM+   ++    V+A +  + +  +P+     ++L  C     ++  +++   +F L
Sbjct: 693 HYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFEL 752

Query: 599 GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
              EN+     L ++Y+  +       +    G  G
Sbjct: 753 E-PENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRG 787



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 222/458 (48%), Gaps = 19/458 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++     SL++ Y        +  LF E  ++DV++WN+MI+  V+N     G+  F
Sbjct: 281 GFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIF 340

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAK 120
            +M+  G+  D  T++ +  A   +  L  G+V+H  SIKA  +  +    N  ++MY+K
Sbjct: 341 IKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSK 400

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGDLNS+   F  M     VSW ++++G +     +  +  F EM   G   D  +++S 
Sbjct: 401 CGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSI 460

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A  G L  GK++H    +   E + +VS  N+L  MY++CG ++ A   F  M  K
Sbjct: 461 LNACAINGNLKSGKIVHDYIRENNLETNSFVS--NALTDMYAKCGSMKDAHDVFSHMKKK 518

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV+SWN +I G+  N    EA  L  EMQ  R  +PD  TV  ++  CA    L +GR +
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQ--RESKPDGTTVACILPACASLAALDKGREI 576

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HGYA+R     D  + N+++D Y K   L  A  LF+ I P  DLVSW  MI+G      
Sbjct: 577 HGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMI-PNKDLVSWTVMIAGYGMHGY 635

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVN 407
                  F +M     +    + ++IL +C+    L+ G K  +  + +     N     
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYA 695

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            ++ +    G+LV A   ++ +    D + W  ++  C
Sbjct: 696 CMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGC 733



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 157/368 (42%), Gaps = 53/368 (14%)

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           QN++ D     +++  C   +   +G+ +  +   S + +D  +   L+ MY +C D+K 
Sbjct: 144 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKE 203

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQ 581
              VF+      +  WN MIS +S +     ++ LF+    L  +PN  +  SIL     
Sbjct: 204 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 263

Query: 582 LGVLRHGKQIHGHVFHLGFQE-----NSFISSALLDMYSNC----------KSNAAWSSM 626
           +  +  G+Q+HG +  LGF       NS IS   +     C          +   +W+SM
Sbjct: 264 VARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM 323

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           IS Y  +G     IE+F +M   G+    ++++++  AC++ G +  G   ++  ++   
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383

Query: 687 VRPETEHHVCIVDMLGRSGKLQEA----------------------------------YE 712
           +  E   +  ++DM  + G L  A                                  ++
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI-SLSNMYVALG 771
            +K+  + P      ++L+AC+ +G+ K GK V + + +   E   +   +L++MY   G
Sbjct: 444 EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCG 503

Query: 772 RWKDAVEI 779
             KDA ++
Sbjct: 504 SMKDAHDV 511


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 219/700 (31%), Positives = 344/700 (49%), Gaps = 40/700 (5%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  YA  G++  ++  F  M   D VSWN+++S  L N +  K +  F +M     Q
Sbjct: 108 NTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQ 167

Query: 172 ADNVSLSSAVAASACLGELSYGK--VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            D  +   AV   AC G   YG    +H L I++G+ DS  V+ T +L+ MYS C  ++ 
Sbjct: 168 HDYATF--AVVLKACTGIEDYGLGLQVHCLAIQMGF-DSDVVTGT-ALVDMYSTCKKLDH 223

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  ++ V W+A+I G+  N +F E   L +++ L   +    AT  +    CA
Sbjct: 224 AFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKL-YKVMLDEGMGVSQATFASAFRSCA 282

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
                  G  +H YA++   GYD ++  + +D Y+K + +  A  +FN   P     S N
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF-PNPTRQSHN 341

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++I G            +F+ +      F   +L   L +C++ +    G  +H   +K 
Sbjct: 342 ALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKC 401

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G   N    N ++ MY  CG L+ A  +   +    D   WN +I A  QN H +E +  
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDME-IKDAVSWNAIIAAHEQNEHVEETLAL 460

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F SM +     PD  T  +V+ AC   +    G  +HG  +KS MGLD  V +A+I MY 
Sbjct: 461 FVSMLRS-TMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYC 519

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEFE--PNEISIVS 574
           +C  +  A  + E        +WN +IS FS  K    AL  F R L+    P+  +  +
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           +L  C  L  +  GKQIHG +  L    + +I+S ++DMYS C               + 
Sbjct: 580 VLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRD 639

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              WS+MI AY YHG G +AI+LF EM    ++P  +  IS+L AC+H G VD+GL Y+ 
Sbjct: 640 YVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFR 699

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            M   Y + P+ EH+ C+VD+LGRSG++ EA E I+++P +    +W  +L  C   G+ 
Sbjct: 700 EMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNV 759

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           ++ ++ A  L +L+P++   Y+ LSN+Y   G W +  +I
Sbjct: 760 EVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKI 799



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 179/737 (24%), Positives = 338/737 (45%), Gaps = 56/737 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++  Y+ V   E +  LF     +DVV+WN+M++  ++N      +  F +M    I+ 
Sbjct: 109 TMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQH 168

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T  +++ A T +     G  VHCL+I+ G  +D       V+MY+ C  L+ +   F
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF 228

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   ++V W+ +++G + N+   + L  ++ M   G      + +SA  + A L    
Sbjct: 229 CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFE 288

Query: 192 YGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            G  +HA  +K   GY++     V  + + MY++C  +  A + F         S NA+I
Sbjct: 289 LGTQLHAYALKTNFGYDN----IVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALI 344

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+A   +  EA ++   +Q    ++ D  ++   ++ C+      EG  +HG A++  L
Sbjct: 345 VGYARQDQVLEALEIFRSLQ-KSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGL 403

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFK 357
            +++ + N+++D Y+K  +L +A L+F+ +  + D VSWN++I+             LF 
Sbjct: 404 DFNICVANTILDMYAKCGALMEACLIFDDM-EIKDAVSWNAIIAAHEQNEHVEETLALFV 462

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            ML    +    T  +++ +C   ++L +G  +H   +K G   +    +A++ MY  CG
Sbjct: 463 SMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCG 522

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            LV A  + +R+   +  S WN +I   +     + A+  F  M  Q    PD+ T   V
Sbjct: 523 MLVEAEKIHERLEERTTVS-WNSIISGFSSEKQGENALSYFSRML-QVGVIPDNFTYATV 580

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C NL     GK +HG  LK  +  D  + + ++ MY +C +++ +  +FE     + 
Sbjct: 581 LDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDY 640

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            TW+ MI A++ +     A++LF  ++ +   PN    +S+L AC  +G +  G     H
Sbjct: 641 VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL----H 696

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
            F             +   Y        +S M+   G  G+  EA+EL   M      P 
Sbjct: 697 YFR-----------EMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESM------PF 739

Query: 655 KSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD----MLGRSGKL 707
           ++  +   +LL  C   G V+   +  N++L+   + P+      ++     + G  G++
Sbjct: 740 EADDVIWRTLLGICRLQGNVEVAEKAANSLLQ---LDPQDSSAYVLLSNVYAIAGMWGEV 796

Query: 708 QEAYEFIKNLPIQPKPG 724
            +   F+KN  ++ +PG
Sbjct: 797 AKIRSFMKNYKLKKEPG 813



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 280/619 (45%), Gaps = 56/619 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + + T T+L+  YS     + +  +F E   ++ V W+A+I   V N     GL  +
Sbjct: 200 GFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLY 259

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M++EG+     T      +   ++  + G  +H  ++K     D+ +    ++MYAKC
Sbjct: 260 KVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKC 319

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F+        S N ++ G    +   + L  FR +  S    D +SLS A+
Sbjct: 320 DRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGAL 379

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + +     G  +H L +K G + +  + V N+++ MY++CG +  A   F  M  KD
Sbjct: 380 TACSAIKGYLEGIQLHGLAVKCGLDFN--ICVANTILDMYAKCGALMEACLIFDDMEIKD 437

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNAII     N   EE   L   M L  ++EPD  T  +++  CA    L  G  VH
Sbjct: 438 AVSWNAIIAAHEQNEHVEETLALFVSM-LRSTMEPDDYTFGSVVKACAGKKALNYGMEVH 496

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           G  I+  +G D  + ++++D Y K   L +AE +   +      VSWNS+ISG       
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERT-TVSWNSIISGFSSEKQG 555

Query: 356 ------FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 F  ML    +   F+++T+L I   C +  ++E GK IH   LKL   ++    
Sbjct: 556 ENALSYFSRMLQVGVIPDNFTYATVLDI---CANLATVELGKQIHGQILKLQLHSDVYIA 612

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           + ++ MY  CG++  +  + ++ +   D   W+ +I A   +G  ++AIK F+ M Q QN
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEK-APKRDYVTWSAMICAYAYHGLGEDAIKLFEEM-QLQN 670

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             P+    ++V+ AC +  + F  K LH    ++S  GLD ++++               
Sbjct: 671 VKPNHTIFISVLRACAH--MGFVDKGLHYFREMRSHYGLDPQMEH--------------- 713

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
                         ++CM+    ++     ALEL   + FE +++   ++L  C   G +
Sbjct: 714 --------------YSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNV 759

Query: 586 RHGKQIHGHVFHLGFQENS 604
              ++    +  L  Q++S
Sbjct: 760 EVAEKAANSLLQLDPQDSS 778



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 280/632 (44%), Gaps = 72/632 (11%)

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  ++ GK  HA     G+   P V V+N L+  Y +C ++  A   F  M  +DV+SWN
Sbjct: 51  LKAINPGKQAHAQITVTGF--VPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWN 108

Query: 247 AIIDGFA-------------------------------LNGKFEEAFDLLHEMQLMRSVE 275
            +I G+A                                NG   ++ ++  +M+L+  ++
Sbjct: 109 TMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLE-IQ 167

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D AT   ++  C        G  VH  AI+     D++   +L+D YS    L  A  +
Sbjct: 168 HDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNI 227

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  + P  + V W+++I+G            L+K ML      S +T  +   SC    +
Sbjct: 228 FCEM-PERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSA 286

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            E G  +H + LK  F  + I   A + MY  C  +V A  +      N      N +IV
Sbjct: 287 FELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSHNALIV 345

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              +     EA++ F+S+ Q+     D ++L   ++AC  ++   EG  LHGLA+K  + 
Sbjct: 346 GYARQDQVLEALEIFRSL-QKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLD 404

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V N ++ MY +C  +  A  +F+     +  +WN +I+A  QN+     L LF  +
Sbjct: 405 FNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSM 464

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
                EP++ +  S++ AC     L +G ++HG V   G   + F+ SA++DMY  C   
Sbjct: 465 LRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGML 524

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       ++  +W+S+IS +    +G  A+  F  M   G+ P   +  ++L  C
Sbjct: 525 VEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDIC 584

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           ++   V+ G Q +  +L +  +  +      IVDM  + G +Q++    +  P +     
Sbjct: 585 ANLATVELGKQIHGQIL-KLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV-T 642

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           W AM+ A ++HG   +G+   +L  +++ +NV
Sbjct: 643 WSAMICAYAYHG---LGEDAIKLFEEMQLQNV 671



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 221/488 (45%), Gaps = 22/488 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+ L  Y+       +  +F    N    + NA+I        V+  L  F  + +  + 
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLD 369

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD  +L   ++A + +    +G  +H L++K G+  +  + N  ++MYAKCG L  +   
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLI 429

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D VSWN I++    N + E+ L  F  M  S  + D+ +  S V A A    L
Sbjct: 430 FDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKAL 489

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           +YG  +H   IK G     +V   +++I MY +CG +  AE+    +  +  VSWN+II 
Sbjct: 490 NYGMEVHGRVIKSGMGLDWFVG--SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIIS 547

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF+   + E A      M L   V PD  T  T++ +CA+   +  G+ +HG  ++  L 
Sbjct: 548 GFSSEKQGENALSYFSRM-LQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLH 606

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+ + ++++D YSK  ++  + ++F   AP  D V+W++MI              LF+E
Sbjct: 607 SDVYIASTIVDMYSKCGNMQDSRIMFEK-APKRDYVTWSAMICAYAYHGLGEDAIKLFEE 665

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTIGVNALMHMYIN 415
           M     + + +  +++L +C     ++  K +H ++      G        + ++ +   
Sbjct: 666 MQLQNVKPNHTIFISVLRACAHMGFVD--KGLHYFREMRSHYGLDPQMEHYSCMVDLLGR 723

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTL 474
            G +  A  L++ +   +D   W  ++  C   G+ + A K   S+ Q     S   V L
Sbjct: 724 SGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLL 783

Query: 475 VNVISACG 482
            NV +  G
Sbjct: 784 SNVYAIAG 791



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 127/311 (40%), Gaps = 56/311 (18%)

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           S++  Q      +T  ++   C NL+    GK  H     +       V N L+  Y +C
Sbjct: 27  SISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKC 86

Query: 520 ---------------RDIKSAST----------------VFESCYNCNLCTWNCMISAFS 548
                          RD+ S +T                +F+S    ++ +WN M+S + 
Sbjct: 87  LNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYL 146

Query: 549 QNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           QN    +++E+F   R LE + +  +   +L ACT +     G Q+H     +GF  +  
Sbjct: 147 QNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVV 206

Query: 606 ISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
             +AL+DMYS CK               ++  WS++I+ Y  + +  E ++L+  M + G
Sbjct: 207 TGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEG 266

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE---YDVRPETEHHVCIVDMLGRSGKL 707
           +  ++++  S   +C+     + G Q +   L+    YD    T      +DM  +  ++
Sbjct: 267 MGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT----ATLDMYAKCDRM 322

Query: 708 QEAYEFIKNLP 718
            +A +     P
Sbjct: 323 VDARKVFNTFP 333


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 229/802 (28%), Positives = 394/802 (49%), Gaps = 75/802 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+   Y   +  +F    N D V+W A+I   V +   +  +  F  M   G   D
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL+ +V                                   N Y   G L  +   F+
Sbjct: 243 QITLVTVV-----------------------------------NAYVALGRLADARKLFT 267

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + V+WN ++SG     + E+ + +F E+  +G +A   SL S ++A A L  L+Y
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G ++HA   K G +D+ YV   ++L++MY++C  ++AA++ F  +  +++V WNA++ GF
Sbjct: 328 GSMVHAQATKEGLDDNVYVG--SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A NG  +E  +    M+     +PD  T  ++ S CA    L  G  +H   I+     +
Sbjct: 386 AQNGLAQEVMEFFSCMK-RHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--- 369
           L + N+L+D Y+KS +L +A   F  +  ++D VSWN++I G  +E     + F F    
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFE-LMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 370 ---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    +L +I+ +C + + L+ G+  HC  +K+G   +T   ++L+ MY+ CG ++
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           AA  +   +   +  S  N +I   T  GH +EAI  F+ + Q     P  VT   ++  
Sbjct: 564 AARDVFYSMPSRNVVSV-NALIAGYTM-GHLEEAIHLFQEI-QMVGLKPTEVTFAGLLDG 620

Query: 481 CGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLC 538
           C    +   G+ +HG  +K   +     V  +L+ +Y   +    + T+F E  Y   L 
Sbjct: 621 CDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLV 680

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  +IS ++Q     +AL+ ++H+  +   P++ +  S+L AC  +  L++G++IH  +
Sbjct: 681 VWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLI 740

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNA-AWSSMISAYGYHGKGWEA 639
           FH GF  +    S+L+DMY+ C               ++N  +W+SMI     +G   EA
Sbjct: 741 FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEA 800

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +E+F +M    I P + + + +LSACSH+G V EG + ++ M+  Y + P  +H  C+VD
Sbjct: 801 LEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVD 860

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR G L EA EFI  L  +  P +W  +L AC  HGD   GK+ A+ L +L+P++   
Sbjct: 861 ILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSS 920

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+ LS++Y     W  AV + +
Sbjct: 921 YVLLSSIYAESENWSGAVSLRR 942



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 164/607 (27%), Positives = 306/607 (50%), Gaps = 24/607 (3%)

Query: 4   LAHLPTSTSLLT---AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + H P   +L+T   AY  +     +  LF +  N +VV WN MI+   +       + F
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E+ + G++   ++L  ++SA+  ++ L  G +VH  + K G+  +  + +  VNMYAK
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAK 356

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +++++  F+ +   + V WN ++ G   N   ++ + +F  M   G Q D  + +S 
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A A L  L++G  +H + IK  +  + +V+  N+L+ MY++ G ++ A + F  M   
Sbjct: 417 FSACASLHYLNFGGQLHTVMIKNKFASNLFVA--NALVDMYAKSGALKEARKQFELMKIH 474

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWNAII G+      +EAF +   M +   V PD  ++ +++S CA+   L+ G+  
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRM-VSNGVLPDEVSLASIVSACANVQELKRGQQC 533

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L       +SL+D Y K   +  A  +F ++ P  ++VS N++I+G      
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM-PSRNVVSVNALIAGYTMGHL 592

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNA 408
                LF+E+  +  + +  T   +L  C+    L  G+ IH   +K GF S++ +   +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y+N    V + +L   + +      W  +I    Q  H ++A++ ++ M +  N  
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM-RSDNIL 711

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD     +V+ AC  +     G+ +H L   +   +D    ++LI MY +C D+K +  V
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 529 F-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           F E     N+ +WN MI   ++N     ALE+F+ +E +   P+E++ + +LSAC+  G 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 585 LRHGKQI 591
           +  G+++
Sbjct: 832 VSEGRKV 838



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 208/815 (25%), Positives = 361/815 (44%), Gaps = 119/815 (14%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F     KDV  WN++++  +++      +  F  M    +R +  T  +++SA + +  +
Sbjct: 99  FSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDV 158

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
             GR VHC   K G    S      ++MYAKC  L  +   F G    DTVSW  +++G 
Sbjct: 159 NFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGY 218

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           + + +P + +  F  M   G   D ++L + V A   LG L+                  
Sbjct: 219 VRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLA------------------ 260

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
                               A + F  +   +VV+WN +I G A  G  EEA     E++
Sbjct: 261 -------------------DARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               ++   +++ +++S  A   +L  G  VH  A +  L  ++ + ++L++ Y+K + +
Sbjct: 302 -KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 330 SKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCS-------QFSFSTLLAILPS 377
             A+ +FN++   N +V WN+M+     +GL +E++   S       Q    T  +I  +
Sbjct: 361 DAAKQVFNSLGERN-IVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSA 419

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C S   L FG  +H   +K  F++N    NAL+ MY   G L  A    + +  + + S 
Sbjct: 420 CASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS- 478

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +IV   Q  +  EA   F+ M       PD V+L +++SAC N++    G+  H L 
Sbjct: 479 WNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVQELKRGQQCHCLL 537

Query: 498 LKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +K  +GLDT     ++LI MY +C  + +A  VF S  + N+ + N +I+ ++    E  
Sbjct: 538 VK--VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE-E 594

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISSALL 611
           A+ LF+ ++    +P E++   +L  C    +L  G+QIHG V   GF  +S  +  +LL
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL 654

Query: 612 DMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
            +Y N                 K    W+++IS Y       +A++ +  M +  I P +
Sbjct: 655 CLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQ 714

Query: 656 SSVISLLSACSHSGLVDEGLQYY---------------NNMLEEY----DVR-------- 688
           ++  S+L AC+    +  G + +               +++++ Y    DV+        
Sbjct: 715 AAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFRE 774

Query: 689 -PETEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKM 741
            P   + +    M   L ++G  +EA E  K +  Q   P    +  +LSACSH G    
Sbjct: 775 MPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSE 834

Query: 742 GKQVAELL---FKLEPENVGYYISLSNMYVALGRW 773
           G++V +L+   +KL P        L  M   LGRW
Sbjct: 835 GRKVFDLMVNNYKLLPR----VDHLGCMVDILGRW 865



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 278/566 (49%), Gaps = 30/566 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y+  S  +++  +F     +++V WNAM+    +N      + FF  M   G +
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQ 407

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T   I SA   ++ L  G  +H + IK    ++  + N  V+MYAK G L  +   
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D VSWN I+ G +   Y ++    FR M  +G   D VSL+S V+A A + EL
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+  H L +K+G + S      +SLI MY +CG + AA   F+ M  ++VVS NA+I 
Sbjct: 528 KRGQQCHCLLVKVGLDTS--TCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLL 309
           G+ + G  EEA  L  E+Q M  ++P   T   L+  C  + +L  GR +HG  ++   L
Sbjct: 586 GYTM-GHLEEAIHLFQEIQ-MVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFL 643

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLY- 361
               ++  SL+  Y  S     +E LF+ +     LV W ++ISG  ++         Y 
Sbjct: 644 SSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQ 703

Query: 362 -------LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
                  L  Q +F++   +L +C    SL+ G+ IH      GF+ + +  ++L+ MY 
Sbjct: 704 HMRSDNILPDQAAFAS---VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYA 760

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CGD+  +  + + +   ++   WN +IV   +NG+ +EA++ FK M +QQ+  PD VT 
Sbjct: 761 KCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQM-EQQSIIPDEVTF 819

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC 532
           + V+SAC +     EG+ +  L + +   L  RV +   ++ + GR   +  A   F + 
Sbjct: 820 LGVLSACSHAGRVSEGRKVFDLMVNNYK-LLPRVDHLGCMVDILGRWGFLNEAEE-FINK 877

Query: 533 YNC--NLCTWNCMISAFSQNKAEVRA 556
             C  +   W+ ++ A  ++  EVR 
Sbjct: 878 LGCKADPMLWSTLLGACRKHGDEVRG 903



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 285/630 (45%), Gaps = 76/630 (12%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +  L   +V+H  S+K G+     L NV V++Y KCG+++ ++  FS +   D  +WN++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG--ELSYGKVIHALGIKL 203
           +S  L +      +  F  M W+ E   N   + A+  SAC G  ++++G+ +H    K 
Sbjct: 114 LSMYLDHGLFATVVQSFVCM-WNHEVRPN-EFTFAMVLSACSGLQDVNFGRQVHCGVFKT 171

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G+    +      LI MY++C  +  A   F G    D VSW A+I G+  +G   EA  
Sbjct: 172 GFGFRSFCQ--GGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +   MQ +    PD  T+VT+++                                    Y
Sbjct: 230 VFDRMQRVGHA-PDQITLVTVVNA-----------------------------------Y 253

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
                L+ A  LF  I P  ++V+WN MISG             F E+     + + S+L
Sbjct: 254 VALGRLADARKLFTQI-PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            ++L +  S   L +G  +H    K G  +N    +AL++MY  C  + AA  +   +  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +   WN ++    QNG  QE ++ F  M ++    PD  T  ++ SAC +L     G 
Sbjct: 373 R-NIVLWNAMLGGFAQNGLAQEVMEFFSCM-KRHGPQPDEFTFTSIFSACASLHYLNFGG 430

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            LH + +K+    +  V NAL+ MY +   +K A   FE     +  +WN +I  + Q +
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               A  +FR +      P+E+S+ SI+SAC  +  L+ G+Q H  +  +G   ++   S
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L+DMY  C               ++  + +++I+ Y   G   EAI LF E+   G++P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKP 609

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           T+ +   LL  C  + +++ G Q +  +++
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMK 639



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 209/465 (44%), Gaps = 25/465 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F ++L  + +L+  Y+     + +   F      D V+WNA+I   V+          F 
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAK 120
            MV  G+  D  +L  IVSA   +  LK+G+  HCL +K G+  D+S C  +  ++MY K
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGL--DTSTCAGSSLIDMYVK 558

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + ++   F  M   + VS N +++G    +  E+ +  F+E+   G +   V+ +  
Sbjct: 559 CGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEIQMVGLKPTEVTFAGL 617

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           +        L+ G+ IH   +K G+  S  + V  SL+ +Y        +E  F  +   
Sbjct: 618 LDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVSLLCLYMNSQRFVDSETLFSELQYP 676

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K +V W A+I G+A     E+A      M+   ++ PD A   +++  CA    L+ G+ 
Sbjct: 677 KGLVVWTALISGYAQQNHHEKALQFYQHMR-SDNILPDQAAFASVLRACAGMSSLQNGQE 735

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
           +H          D +  +SL+D Y+K   +  +  +F  +   N+++SWNSMI GL K  
Sbjct: 736 IHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNG 795

Query: 358 ---EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTI 404
              E L +  Q           T L +L +C+    +  G+ +    +   KL    + +
Sbjct: 796 YAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHL 855

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           G   ++ +    G L  A   + ++   +D   W+ ++ AC ++G
Sbjct: 856 G--CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG 898



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 174/375 (46%), Gaps = 38/375 (10%)

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++L   K IH   LK+G     +  N ++ +Y+ CG++  A     R+    D   WN V
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRL-EKKDVFAWNSV 113

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +     +G F   +++F  M   +   P+  T   V+SAC  L+    G+ +H    K+ 
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHE-VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTG 172

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
            G  +  Q  LI MY +CR ++ A  VF+   N +  +W  +I+ + ++   + A+++F 
Sbjct: 173 FGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFD 232

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            ++     P++I++V++++A   LG L   +++   + +                     
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPN--------------------P 272

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +  AW+ MIS +   G   EAI  F E+  +G++ T+SS+ S+LSA +   +++     Y
Sbjct: 273 NVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLN-----Y 327

Query: 679 NNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            +M+     +   + +V     +V+M  +  K+  A +   +L  +    +W AML   +
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG-ERNIVLWNAMLGGFA 386

Query: 735 HHGDTKMGKQVAELL 749
            +G   + ++V E  
Sbjct: 387 QNG---LAQEVMEFF 398


>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g08490-like [Brachypodium
           distachyon]
          Length = 929

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 244/793 (30%), Positives = 386/793 (48%), Gaps = 96/793 (12%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQG----RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           M+  G+R D    L + +A+   + L+ G    R +H   ++ G  A  ++    ++MY 
Sbjct: 76  MLGRGLRPDR---LALAAAIKSASALRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYG 132

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVS 176
           +CG L  +   F  M C DTV WN +++G     Y +     FR M   G        V+
Sbjct: 133 RCGTLADARLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVT 192

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC---GDIEAAERA 233
           ++  +   A L  L  G  IH   +K G E        N+LIS+Y++C   G ++ A RA
Sbjct: 193 VAVVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLCG--NALISLYAKCGGSGTMDDAHRA 250

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  + CKDVVSWN+II G + NG F+EA  L  +M   + + P+ +TV  ++ +C+    
Sbjct: 251 FSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCL-PNYSTVANILPVCS---F 306

Query: 294 LRE----GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           +      G+ VHG+  R  L  D+ + N+LM  YSK   +  AE +F ++    D+++WN
Sbjct: 307 MEHGKYYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNT-RDIITWN 365

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++ISG            LF  +L         +L+++L +C      + G  +H +  + 
Sbjct: 366 TIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRH 425

Query: 398 G-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG-HFQEAI 455
                 T  +N+L+  Y  C     A      I  + D+  WN ++ AC + G H +E  
Sbjct: 426 PVLHQETSLMNSLVSFYSQCNRFDDALHAFADIL-SKDSISWNAILSACAKRGKHIEEFF 484

Query: 456 KTFKSMTQQQNASPDSVTLVNVISA---CGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           K F  M  +     DSVT++NV+     CG+ ++  E    HG +L+     +T V NA+
Sbjct: 485 KLFNEMCHEVT-RWDSVTILNVVRVSNLCGSTKMVREA---HGYSLRVGYIGETSVANAI 540

Query: 513 ITMYGRCRDIKSASTVFE--------------SCYNCN-----------------LCTWN 541
           +  Y +C   + A  +F               SCY  N                   TWN
Sbjct: 541 LDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWN 600

Query: 542 CMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
            MI  ++QN    +A  LFR L+  P+ ISI +IL AC  L +++  +Q HG++      
Sbjct: 601 LMIQVYAQNGMCDQAFSLFRQLQC-PDTISITNILLACIHLSLVQLVRQCHGYMLRASL- 658

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           E+  +  +LLD YS C               K    +++MI  Y  HG   EA+ELF EM
Sbjct: 659 EDIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEM 718

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
              GI P    + +LLSACSH+GLVD G++ + ++ E Y + P  EH+ C+VD+L R G+
Sbjct: 719 LTLGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGR 778

Query: 707 LQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           LQ+AY F  ++P        WG+++ AC  HGD ++G+  A+ LF +E  ++G Y+++SN
Sbjct: 779 LQDAYNFALDMPPHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGDIGNYVTVSN 838

Query: 766 MYVALGRWKDAVE 778
           +Y A   W D VE
Sbjct: 839 IYAAGEEW-DGVE 850



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 179/694 (25%), Positives = 312/694 (44%), Gaps = 90/694 (12%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD---S 73
           Y        +  +F E    D V WN +IT              F  MV  G       +
Sbjct: 131 YGRCGTLADARLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTA 190

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECT 130
            T+ +++    ++  L+ G  +H   +K G+ +D+   N  +++YAKC   G ++ +   
Sbjct: 191 VTVAVVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRA 250

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS + C D VSWN+I++G   N   ++ L  F +M  S +   N S  + +       E 
Sbjct: 251 FSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQM-TSDKCLPNYSTVANILPVCSFMEH 309

Query: 191 S--YGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
              YGK +H    ++G Y D   +SV N+L++ YS+  ++ AAE  F  M  +D+++WN 
Sbjct: 310 GKYYGKEVHGFVFRVGLYVD---ISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNT 366

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II G+ +NG      DL H + L   + PD  ++++L++ CA     + G  VHGY  R 
Sbjct: 367 IISGYLMNGYHSRVLDLFHRL-LSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRH 425

Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
            +L  +  +MNSL+ FYS+ N    A   F  I    D +SWN+++S             
Sbjct: 426 PVLHQETSLMNSLVSFYSQCNRFDDALHAFADILS-KDSISWNAILSACAKRGKHIEEFF 484

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF EM +  +++   T+L ++   N   S +  +  H + L++G+   T   NA++  Y
Sbjct: 485 KLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILDAY 544

Query: 414 INCGDLVAAFSLLQR------ISHNSDTSC------------------------WNIVIV 443
             CG    A  L +       +++N+  SC                        WN++I 
Sbjct: 545 AKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQ 604

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG   +A   F+     Q   PD++++ N++ AC +L L    +  HG  L++ + 
Sbjct: 605 VYAQNGMCDQAFSLFR-----QLQCPDTISITNILLACIHLSLVQLVRQCHGYMLRASLE 659

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH- 562
            D  ++ +L+  Y +C +I  A  +F+     +L T+  MI  ++ +     A+ELF   
Sbjct: 660 -DIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEM 718

Query: 563 --LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL--------------------GF 600
             L   P+ + + ++LSAC+  G++  G +I   V  +                    G 
Sbjct: 719 LTLGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGR 778

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
            ++++  +  LDM  +  +  AW S+I A   HG
Sbjct: 779 LQDAY--NFALDMPPHLVNANAWGSLIGACKVHG 810



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 224/502 (44%), Gaps = 64/502 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +    +L+T YS V    ++ ++F     +D++TWN +I+  + N      L  F
Sbjct: 325 GLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNGYHSRVLDLF 384

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAK 120
             ++  G+  DS +L+ +++A  Q+   K G  VH    +  ++  ++SL N  V+ Y++
Sbjct: 385 HRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQETSLMNSLVSFYSQ 444

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           C   + +   F+ +   D++SWN I+S C     + E+    F EM     + D+V++ +
Sbjct: 445 CNRFDDALHAFADILSKDSISWNAILSACAKRGKHIEEFFKLFNEMCHEVTRWDSVTILN 504

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-------------- 225
            V  S   G     +  H   +++GY      SV N+++  Y++CG              
Sbjct: 505 VVRVSNLCGSTKMVREAHGYSLRVGYIGE--TSVANAILDAYAKCGYPQDADVLFRNLAV 562

Query: 226 -----------------DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
                             +E AE  F  M+ KD  +WN +I  +A NG  ++AF L  ++
Sbjct: 563 RNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQL 622

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q      PD  ++  ++  C    L++  R  HGY +R  L  D+ +  SL+D YSK  +
Sbjct: 623 QC-----PDTISITNILLACIHLSLVQLVRQCHGYMLRASL-EDIHLEGSLLDAYSKCGN 676

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           ++ A  LF  ++P  DLV++ +MI G            LF EML L        L A+L 
Sbjct: 677 ITDAYNLFQ-VSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLS 735

Query: 377 SCNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL-LQRIS 430
           +C+    ++ G  I       ++++    + T  V+ L       G L  A++  L    
Sbjct: 736 ACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLS----RGGRLQDAYNFALDMPP 791

Query: 431 HNSDTSCWNIVIVACTQNGHFQ 452
           H  + + W  +I AC  +G  +
Sbjct: 792 HLVNANAWGSLIGACKVHGDVR 813


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 225/739 (30%), Positives = 372/739 (50%), Gaps = 48/739 (6%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMI-----ADSSLCNVFVNMYAKCGDLNSSECT 130
           LL ++      + L  G  +H  ++ +G++       ++L    V MY        +   
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAV 98

Query: 131 FSGM---HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW---SGEQADNVSLSSAVAAS 184
           FS +     A  + WN ++ G     +    +L++ +M W   S  + D  +L   V + 
Sbjct: 99  FSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKM-WAHPSSPRPDGHTLPYVVKSC 157

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A LG L  G+++H     LG +   YV   ++LI MY+  G ++ A   F GM  +D V 
Sbjct: 158 AALGALHLGRLVHRTTRALGLDRDMYVG--SALIKMYADAGLLDGAREVFDGMDERDCVL 215

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN ++DG+   G    A  L   M+     +P+ AT+   +S+CA    L  G  +H  A
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMR-ASGCDPNFATLACFLSVCAAEADLLSGVQLHTLA 274

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++  L  ++ + N+L+  Y+K   L +A  LF  + P +DLV+WN MISG          
Sbjct: 275 VKYGLEPEVAVANTLVSMYAKCQCLEEAWRLF-GLMPRDDLVTWNGMISGCVQNGLVDDA 333

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF +M     Q    TL ++LP+       + GK IH + ++     +   V+AL+ +
Sbjct: 334 LRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDI 393

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  C D+  A ++    + + D    + +I     N   + A+K F+ +       P++V
Sbjct: 394 YFKCRDVRMAQNVFD-ATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLAL-GIKPNAV 451

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            + + + AC ++     G+ LHG  LK+       V++AL+ MY +C  +  +  +F   
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKM 511

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGK 589
              +  TWN MIS+F+QN     AL+LFR +  E    N ++I SILSAC  L  + +GK
Sbjct: 512 SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGK 571

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           +IHG +     + + F  SAL+DMY  C               K+  +W+S+ISAYG HG
Sbjct: 572 EIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHG 631

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              E+++L   M   G +    + ++L+SAC+H+G V EGL+ +  M EEY + P+ EH 
Sbjct: 632 LVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHL 691

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+  R+GKL +A +FI ++P +P  G+WGA+L AC  H + ++ +  ++ LFKL+P
Sbjct: 692 SCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDP 751

Query: 755 ENVGYYISLSNMYVALGRW 773
            N GYY+ +SN+    GRW
Sbjct: 752 HNCGYYVLMSNINAVAGRW 770



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 178/632 (28%), Positives = 311/632 (49%), Gaps = 37/632 (5%)

Query: 11  TSLLTAYSNVSYFESSLALF---YETCNKDVVTWNAMI---TACVENRCVVMGLHFFGEM 64
           T L+  Y     F  ++A+F           + WN +I   T    +R  V+   F+ +M
Sbjct: 80  TRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVL---FYVKM 136

Query: 65  V--EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
                  R D  TL  +V +   +  L  GR+VH  +   G+  D  + +  + MYA  G
Sbjct: 137 WAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAG 196

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F GM   D V WN +M G +        +  FR M  SG   +  +L+  ++
Sbjct: 197 LLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLS 256

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
             A   +L  G  +H L +K G E  P V+V N+L+SMY++C  +E A R F  M   D+
Sbjct: 257 VCAAEADLLSGVQLHTLAVKYGLE--PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL 314

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V+WN +I G   NG  ++A  L  +MQ    ++PD  T+ +L+    +    ++G+ +HG
Sbjct: 315 VTWNGMISGCVQNGLVDDALRLFCDMQ-KSGLQPDSVTLASLLPALTELNGFKQGKEIHG 373

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           Y +R     D+ ++++L+D Y K   +  A+ +F+A   + D+V  ++MISG        
Sbjct: 374 YIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSI-DVVIGSTMISGYVLNRMSE 432

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               +F+ +L L  + +   + + LP+C S  ++  G+ +H + LK  +       +ALM
Sbjct: 433 AAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALM 492

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG L  +  +  ++S   D   WN +I +  QNG  +EA+  F+ M   +    +
Sbjct: 493 DMYSKCGRLDLSHYMFSKMS-AKDEVTWNSMISSFAQNGEPEEALDLFRQMI-MEGVKYN 550

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +VT+ +++SAC  L   + GK +HG+ +K  +  D   ++ALI MYG+C +++ A  VFE
Sbjct: 551 NVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFE 610

Query: 531 SCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                N  +WN +ISA+  +   K  V  L   +   F+ + ++ ++++SAC   G ++ 
Sbjct: 611 HMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQE 670

Query: 588 GKQIH---GHVFHLGFQENSFISSALLDMYSN 616
           G ++       +H+  Q      S ++D+YS 
Sbjct: 671 GLRLFRCMTEEYHIEPQVEHL--SCMVDLYSR 700



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  + +L++ Y+     E +  LF      D+VTWN MI+ CV+N  V   L  F
Sbjct: 278 GLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLF 337

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + G++ DS TL  ++ ALT++N  KQG+ +H   ++     D  L +  V++Y KC
Sbjct: 338 CDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKC 397

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+  ++  F      D V  +T++SG + N   E  +  FR +   G + + V ++S +
Sbjct: 398 RDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTL 457

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +  +  G+ +H   +K  YE   YV   ++L+ MYS+CG ++ +   F  M+ KD
Sbjct: 458 PACASMAAMRIGQELHGYVLKNAYEGRCYVE--SALMDMYSKCGRLDLSHYMFSKMSAKD 515

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I  FA NG+ EEA DL  +M +M  V+ +  T+ +++S CA    +  G+ +H
Sbjct: 516 EVTWNSMISSFAQNGEPEEALDLFRQM-IMEGVKYNNVTISSILSACAGLPAIYYGKEIH 574

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  I+  +  DL   ++L+D Y K  +L  A  +F  +   N+ VSWNS+IS     GL 
Sbjct: 575 GIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNE-VSWNSIISAYGAHGLV 633

Query: 357 KEMLYL--CSQ-----FSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
           KE + L  C Q         T LA++ +C     ++ G +   C   +         ++ 
Sbjct: 634 KESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSC 693

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +Y   G L  A   +  +    D   W  ++ AC
Sbjct: 694 MVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHAC 730



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 271/577 (46%), Gaps = 36/577 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             ++L+  Y++    + +  +F     +D V WN M+   V+   V   +  F  M   G
Sbjct: 184 VGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASG 243

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              +  TL   +S       L  G  +H L++K G+  + ++ N  V+MYAKC  L  + 
Sbjct: 244 CDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAW 303

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D V+WN ++SGC+ N   +  L  F +M  SG Q D+V+L+S + A   L 
Sbjct: 304 RLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363

Query: 189 ELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
               GK IH   ++   + D   V + ++L+ +Y +C D+  A+  F      DVV  + 
Sbjct: 364 GFKQGKEIHGYIVRNCAHVD---VFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGST 420

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+ LN   E A  +   + L   ++P+   V + +  CA    +R G+ +HGY ++ 
Sbjct: 421 MISGYVLNRMSEAAVKMFRYL-LALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKN 479

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                  + ++LMD YSK   L  +  +F+ ++   D V+WNSMIS             L
Sbjct: 480 AYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSA-KDEVTWNSMISSFAQNGEPEEALDL 538

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F++M+    +++  T+ +IL +C    ++ +GK IH   +K     +    +AL+ MY  
Sbjct: 539 FRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGK 598

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG+L  A  + + +   ++ S WN +I A   +G  +E++     M Q++    D VT +
Sbjct: 599 CGNLELALRVFEHMPEKNEVS-WNSIISAYGAHGLVKESVDLLCCM-QEEGFKADHVTFL 656

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ------NALITMYGRCRDI-KSASTV 528
            +ISAC     A  G+   GL L   M  +  ++      + ++ +Y R   + K+   +
Sbjct: 657 ALISAC-----AHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFI 711

Query: 529 FESCYNCNLCTWNCMISAFSQNK----AEVRALELFR 561
            +  +  +   W  ++ A   ++    AE+ + ELF+
Sbjct: 712 ADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 748


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 198/658 (30%), Positives = 342/658 (51%), Gaps = 78/658 (11%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK++H    +LG E   Y+   NSLI+ YS+  D+ +AE+ F  MT +DVV+W+++I  +
Sbjct: 75  GKMVHKQLDELGVEIDIYLG--NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAY 132

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A N    +AFD    M    ++EP+  T ++++  C +  +L +GR +H       +  D
Sbjct: 133 AGNNHPAKAFDTFERMTDA-NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETD 191

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           + +  +L+  YSK   +S A  +F+ +   N +VSW ++I              L+++ML
Sbjct: 192 VAVATALITMYSKCGEISVACEVFHKMTERN-VVSWTAIIQANAQHRKLNEAFELYEQML 250

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 +  T +++L SCN+PE+L  G+ IH    + G   + I  NAL+ MY  C  + 
Sbjct: 251 QAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQ 310

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGH-----FQEAIKTFKSMTQQQNASPDSVTLV 475
            A  +  R+S   D   W+ +I    Q+G+       E  +  + M +++   P+ VT +
Sbjct: 311 EAREIFDRMS-KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERM-RREGVFPNKVTFM 368

Query: 476 NVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR------------ 520
           +++ AC   G LE   +G+ +H    K    LD  +Q A+  MY +C             
Sbjct: 369 SILRACTAHGALE---QGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425

Query: 521 -------------------DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                              D+ SA  VF      N+ +WN MI+ ++QN   V+  EL  
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            ++   F+P+ +++++IL AC  L  L  GK +H     LG + ++ ++++L+ MYS C 
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 545

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         +   AW++M++ YG HG G EA++LF  M    + P + ++ +++S
Sbjct: 546 QVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVIS 605

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACS +GLV EG + +  M E++ + P  +H+ C+VD+LGR+G+LQEA EFI+++P +P  
Sbjct: 606 ACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDI 665

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VW A+L AC  H + ++ ++ A  + +LEP     YI+LSN+Y   GRW D+ ++ +
Sbjct: 666 SVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRR 723



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 319/666 (47%), Gaps = 76/666 (11%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +   G + + G+  +S T   ++    +    + G++VH    + G+  D  L N  +N
Sbjct: 40  AIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLIN 99

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y+K  D+ S+E  F  M   D V+W+++++    NN+P K    F  M  +  + + ++
Sbjct: 100 FYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRIT 159

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + A      L  G+ IH +   +G E    V+V  +LI+MYS+CG+I  A   F  
Sbjct: 160 FLSILKACNNYSILEKGRKIHTIVKAMGMETD--VAVATALITMYSKCGEISVACEVFHK 217

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           MT ++VVSW AII   A + K  EAF+L  +M L   + P+  T V+L++ C     L  
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQM-LQAGISPNAVTFVSLLNSCNTPEALNR 276

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR +H +   R L  D+++ N+L+  Y K NS+ +A  +F+ ++   D++SW++MI+G  
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK-RDVISWSAMIAGYA 335

Query: 355 ------------LFKEMLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
                       +F+ +  +  +  F    T ++IL +C +  +LE G+ IH    K+GF
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGF 395

Query: 400 -------------------------------SNNTIGVNALMHMYINCGDLVAAFSLLQR 428
                                          + N +   + + MYI CGDL +A  +   
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE 455

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +  S WN++I    QNG   +  +   SM + +   PD VT++ ++ ACG L    
Sbjct: 456 MPTRNVVS-WNLMIAGYAQNGDIVKVFELLSSM-KAEGFQPDRVTVITILEACGALAGLE 513

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            GK +H  A+K  +  DT V  +LI MY +C  +  A TVF+   N +   WN M++ + 
Sbjct: 514 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYG 573

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q+   + A++LF+ +  E   PNEI++ +++SAC++ G+++ G++I    F +  QE+  
Sbjct: 574 QHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI----FRM-MQED-- 626

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                   +        +  M+   G  G+  EA E    M      P  S   +LL AC
Sbjct: 627 --------FKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSM---PCEPDISVWHALLGAC 675

Query: 666 -SHSGL 670
            SH+ +
Sbjct: 676 KSHNNV 681



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 162/617 (26%), Positives = 282/617 (45%), Gaps = 57/617 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  YS      S+  +F     +DVVTW++MI A   N         F  M +  I  
Sbjct: 96  SLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEP 155

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T L I+ A    + L++GR +H +    GM  D ++    + MY+KCG+++ +   F
Sbjct: 156 NRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVF 215

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW  I+     +    +    + +M  +G   + V+  S + +      L+
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH+   + G E    + V N+LI+MY +C  ++ A   F  M+ +DV+SW+A+I G
Sbjct: 276 RGRRIHSHISERGLETD--MIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333

Query: 252 FALNG-----KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +A +G       +E F LL  M+    V P+  T ++++  C     L +GR +H    +
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMR-REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-------------------------- 340
                D  +  ++ + Y+K  S+ +AE +F+ +A                          
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKV 452

Query: 341 ----PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
               P  ++VSWN MI+G            L   M     Q    T++ IL +C +   L
Sbjct: 453 FSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGL 512

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           E GK +H   +KLG  ++T+   +L+ MY  CG +  A ++  ++S N DT  WN ++  
Sbjct: 513 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAG 571

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             Q+G   EA+  FK M +++  SP+ +TL  VISAC    L  EG+ +  + ++    +
Sbjct: 572 YGQHGDGLEAVDLFKRMLKER-VSPNEITLTAVISACSRAGLVQEGREIFRM-MQEDFKM 629

Query: 505 DTRVQN--ALITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISA-FSQNKAEVRALELF 560
             R Q+   ++ + GR   ++ A    +S     ++  W+ ++ A  S N  ++      
Sbjct: 630 TPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAH 689

Query: 561 RHLEFEPNEISIVSILS 577
             LE EP+  S+   LS
Sbjct: 690 HILELEPSYASVYITLS 706



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 241/530 (45%), Gaps = 50/530 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  +T+L+T YS       +  +F++   ++VV+W A+I A  ++R +      +
Sbjct: 187 GMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELY 246

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ GI  ++ T + ++++      L +GR +H    + G+  D  + N  + MY KC
Sbjct: 247 EQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKC 306

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK-----CLLYFREMGWSGEQADNVS 176
             +  +   F  M   D +SW+ +++G   + Y +K            M   G   + V+
Sbjct: 307 NSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVT 366

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYE----------------------DSPYVSVT 214
             S + A    G L  G+ IHA   K+G+E                      +  +  + 
Sbjct: 367 FMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA 426

Query: 215 N-------SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           N       S +SMY +CGD+ +AE+ F  M  ++VVSWN +I G+A NG   + F+LL  
Sbjct: 427 NKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSS 486

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+     +PD  TV+T++  C     L  G+ VH  A++  L  D ++  SL+  YSK  
Sbjct: 487 MK-AEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 545

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +++A  +F+ ++   D V+WN+M++G            LFK ML      +  TL A++
Sbjct: 546 QVAEARTVFDKMSN-RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVI 604

Query: 376 PSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+    ++ G+ I    Q     +        ++ +    G L  A   +Q +    D
Sbjct: 605 SACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPD 664

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGN 483
            S W+ ++ AC  + + Q A +    + + + + +   +TL N+ +  G 
Sbjct: 665 ISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGR 714



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 176/394 (44%), Gaps = 50/394 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-----RCVV 55
           RG    +  + +L+T Y   +  + +  +F     +DV++W+AMI    ++       + 
Sbjct: 287 RGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESID 346

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
                   M  EG+  +  T + I+ A T    L+QGR +H    K G   D SL     
Sbjct: 347 EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF 406

Query: 116 NMYA-------------------------------KCGDLNSSECTFSGMHCADTVSWNT 144
           NMYA                               KCGDL+S+E  FS M   + VSWN 
Sbjct: 407 NMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNL 466

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +++G   N    K       M   G Q D V++ + + A   L  L  GK++HA  +KLG
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLG 526

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            E    V+   SLI MYS+CG +  A   F  M+ +D V+WNA++ G+  +G   EA DL
Sbjct: 527 LESDTVVAT--SLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDL 584

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS------ 318
              M L   V P+  T+  +IS C+ + L++EGR +      R++  D  M         
Sbjct: 585 FKRM-LKERVSPNEITLTAVISACSRAGLVQEGREIF-----RMMQEDFKMTPRKQHYGC 638

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           ++D   ++  L +AE    ++    D+  W++++
Sbjct: 639 MVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 161/331 (48%), Gaps = 27/331 (8%)

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  +EAI+    + +Q+    +S T   VI  C       +GK +H    +  + +D  +
Sbjct: 35  GRLREAIQLL-GIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EF 565
            N+LI  Y +  D+ SA  VF      ++ TW+ MI+A++ N    +A + F  +     
Sbjct: 94  GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           EPN I+ +SIL AC    +L  G++IH  V  +G + +  +++AL+ MYS C        
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  ++  +W+++I A   H K  EA EL+ +M  +GI P   + +SLL++C+    
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           ++ G + ++++ E      ET+  V   ++ M  +   +QEA E    +  +     W A
Sbjct: 274 LNRGRRIHSHISERG---LETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-WSA 329

Query: 729 MLSACSHHG--DTKMGKQVAELLFKLEPENV 757
           M++  +  G  D +   +V +LL ++  E V
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGV 360



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 143/300 (47%), Gaps = 9/300 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TS L+ Y       S+  +F E   ++VV+WN MI    +N  +V        M  EG +
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ I+ A   +  L++G++VH  ++K G+ +D+ +    + MY+KCG +  +   
Sbjct: 494 PDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTV 553

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   DTV+WN +++G   +    + +  F+ M       + ++L++ ++A +  G +
Sbjct: 554 FDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLV 613

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
             G+ I  + ++  ++ +P       ++ +  + G ++ AE     M C+ D+  W+A++
Sbjct: 614 QEGREIFRM-MQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALL 672

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                +   + A    H +     +EP  A+V   +S    ++  + GR      +RR++
Sbjct: 673 GACKSHNNVQLAERAAHHIL---ELEPSYASVYITLS----NIYAQAGRWDDSTKVRRVM 725


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 213/748 (28%), Positives = 378/748 (50%), Gaps = 92/748 (12%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT------------ 139
           G+++H   +++ +  D+ L N  +  YAKC  +++S   F  M   D             
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 140 -------------------VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
                              VSWNT++S    N + +K L  +  M   G    + +L+S 
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   L ++  G+  H + IK+G +++ YV   N+L+ MY++C  I  A +AF  +   
Sbjct: 144 LSACGALVDVECGRRCHGISIKIGLDNNIYVG--NALLGMYAKCRCIGDAIQAFGDVPEP 201

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA----------- 289
           + VS+ A++ G A + +  EAF L   M L   +  D  ++ +++ +C+           
Sbjct: 202 NEVSFTAMMGGLADSDQVNEAFRLFRLM-LRNRIHVDSVSLSSVLGVCSRGGCGEFGLHD 260

Query: 290 -DSLLLRE--GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            + +L  +  G+ VH   I+     DL + NSL+D Y+K+ ++  AE++F  + P   +V
Sbjct: 261 SNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNM-PEVSVV 319

Query: 347 SWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           SWN MI+G  ++                     S +++E+ + +       GF  + I  
Sbjct: 320 SWNVMIAGYGQK-------------------SQSSKAIEYLQRMQYH----GFEPDEITY 356

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             ++   I  GD+ A   +   +S  S  S WN ++   +QN + +EA+K F+ M Q ++
Sbjct: 357 VNMLVACIKSGDIEAGRQMFDGMSSPS-LSSWNTILSGYSQNENHKEAVKLFREM-QFRS 414

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD  TL  ++S+   + L   G+ +H ++ K++   D  + + LI MY +C  ++ A 
Sbjct: 415 VHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAK 474

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            +F+     ++  WN M++  S N  +  A   F+ +  +   P++ S  ++LS C +L 
Sbjct: 475 RIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLS 534

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L  G+Q+H  +   G+  ++F+ SAL+DMYS C               K+   W+ MI 
Sbjct: 535 SLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIH 594

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y  +G G EA+ L+ +M  SG +P   + +++L+ACSHSGLVD G++ +N+M +E+ V 
Sbjct: 595 GYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVE 654

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  +H+ CI+D LGR+G+L EA   I  +P +  P +W  +LS+C  + D  + ++ AE 
Sbjct: 655 PLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEE 714

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDA 776
           LF L+P+N   Y+ L+N+Y +LGRW DA
Sbjct: 715 LFHLDPQNSAPYVLLANIYSSLGRWDDA 742



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 273/612 (44%), Gaps = 70/612 (11%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  ++L AY   S  E +  LF E   +++V+WN +I+A   N      L  +  M  EG
Sbjct: 73  TWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREG 132

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                 TL  ++SA   +  ++ GR  H +SIK G+  +  + N  + MYAKC  +  + 
Sbjct: 133 FVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAI 192

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS--AVAASAC 186
             F  +   + VS+  +M G   ++   +    FR M  +    D+VSLSS   V +   
Sbjct: 193 QAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGG 252

Query: 187 LGELS------------YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            GE              +G+ +H L IK G+E    + + NSL+ MY++ G++++AE  F
Sbjct: 253 CGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESD--LHLNNSLLDMYAKNGNMDSAEMIF 310

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M    VVSWN +I G+    +  +A + L  MQ     EPD  T V ++  C  S  +
Sbjct: 311 VNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQY-HGFEPDEITYVNMLVACIKSGDI 369

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             GR                                    +F+ ++  + L SWN+++SG
Sbjct: 370 EAGRQ-----------------------------------MFDGMSSPS-LSSWNTILSG 393

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       LF+EM +       +TL  IL S      LE G+ +H    K  F  +
Sbjct: 394 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTD 453

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               + L+ MY  CG +  A  +  RI+   D  CWN ++   + N   +EA   FK M 
Sbjct: 454 IYLASGLIGMYSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNSLDKEAFTFFKKM- 511

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           +++   P   +   V+S C  L    +G+ +H    +     D  V +ALI MY +C D+
Sbjct: 512 REKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDV 571

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
            +A  VF+     N  TWN MI  ++QN     A+ L+  +     +P+ I+ V++L+AC
Sbjct: 572 DAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTAC 631

Query: 580 TQLGVLRHGKQI 591
           +  G++  G +I
Sbjct: 632 SHSGLVDTGIKI 643



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 181/354 (51%), Gaps = 6/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF     T  ++L A       E+   +F    +  + +WN +++   +N      +  F
Sbjct: 348 GFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLF 407

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +  D TTL II+S+L  M  L+ GR VH +S KA    D  L +  + MY+KC
Sbjct: 408 REMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 467

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  F  +   D V WN++M+G   N+  ++   +F++M   G      S ++ +
Sbjct: 468 GKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVL 527

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A L  LS G+ +H+   + GY +  +V   ++LI MYS+CGD++AA   F  M  K+
Sbjct: 528 SCCAKLSSLSQGRQVHSQIAREGYMNDAFVG--SALIDMYSKCGDVDAARWVFDMMLGKN 585

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN +I G+A NG  +EA  LL+E  +    +PD  T V +++ C+ S L+  G  + 
Sbjct: 586 TVTWNEMIHGYAQNGCGDEAV-LLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIF 644

Query: 302 GYAIRRLLGYDLLM--MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
             ++++  G + L+     ++D   ++  L +AE+L + +    D + W  ++S
Sbjct: 645 N-SMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 697



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 232/527 (44%), Gaps = 97/527 (18%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF----------- 322
           +E     + +L+  C D      G+ +H + +R  L  D  + N L++F           
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 323 --------------------YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE---- 358
                               Y K++ L  A +LF A  P  ++VSWN++IS L +     
Sbjct: 61  RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLF-AEMPERNIVSWNTLISALTRNGFEQ 119

Query: 359 ----MLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               + Y  S+  F     TL ++L +C +   +E G+  H   +K+G  NN    NAL+
Sbjct: 120 KALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALL 179

Query: 411 HMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            MY  C   GD + AF  +   +  S T+    ++     +    EA + F+ M + +  
Sbjct: 180 GMYAKCRCIGDAIQAFGDVPEPNEVSFTA----MMGGLADSDQVNEAFRLFRLMLRNR-I 234

Query: 468 SPDSVTLVNVISACGN--------------LELAFEGKSLHGLALKSLMGLDTRVQNALI 513
             DSV+L +V+  C                L     G+ +H L +K     D  + N+L+
Sbjct: 235 HVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLL 294

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
            MY +  ++ SA  +F +    ++ +WN MI+ + Q     +A+E  + ++   FEP+EI
Sbjct: 295 DMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEI 354

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAY 630
           + V++L AC + G +  G+Q                   + D  S+  S ++W++++S Y
Sbjct: 355 TYVNMLVACIKSGDIEAGRQ-------------------MFDGMSS-PSLSSWNTILSGY 394

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +    EA++LF EM    + P ++++  +LS+ +   L++ G Q +  + ++   R +
Sbjct: 395 SQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVH-AVSQKAVFRTD 453

Query: 691 TEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACS 734
                 ++ M  + GK++ A   ++ I  L I      W +M++  S
Sbjct: 454 IYLASGLIGMYSKCGKVEMAKRIFDRIAELDIV----CWNSMMAGLS 496



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 155/376 (41%), Gaps = 78/376 (20%)

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC-------------- 519
           L +++  C + +    GK +H   L+S +  DT + N LI  Y +C              
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 520 -RDI----------------KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            RDI                + A  +F      N+ +WN +ISA ++N  E +AL ++  
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK- 618
           +    F P   ++ S+LSAC  L  +  G++ HG    +G   N ++ +ALL MY+ C+ 
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187

Query: 619 --------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                         +  ++++M+       +  EA  LF  M  + I     S+ S+L  
Sbjct: 188 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 247

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI--------------VDMLGRSGKLQEA 710
           CS  G  + GL   N++L   DV  +  H + I              +DM  ++G +  A
Sbjct: 248 CSRGGCGEFGLHDSNDVLSS-DVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSA 306

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-----EPENVGYYISLSN 765
                N+P +     W  M++    +G      +  E L ++     EP+ + Y     N
Sbjct: 307 EMIFVNMP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRMQYHGFEPDEITYV----N 358

Query: 766 MYVALGRWKDAVEIGK 781
           M VA  +  D +E G+
Sbjct: 359 MLVACIKSGD-IEAGR 373


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 226/743 (30%), Positives = 374/743 (50%), Gaps = 44/743 (5%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           LL ++      + L  G  VH  ++ AG+ A D++L    V MY        +   FS +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 135 H---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAASACLG 188
                A  + WN ++ G          LL++ +M W+   A   D+ +    V + A LG
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            ++ G+++H     LG +   +V   ++LI MY+  G +  A + F GM  +D V WN +
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVG--SALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +DG+   G    A +L  +M+     EP+ AT+   +S+ A    L  G  +H  A++  
Sbjct: 219 MDGYVKAGSVSSAVELFGDMR-ASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  ++ + N+L+  Y+K   L     LF  + P +DLV+WN MISG            LF
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFG-LMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +M     +    TL+++LP+         GK +H + ++     +   V+AL+ +Y  C
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
             +  A S+    S   D    + +I     NG  QEA+K F+ + +Q    P++V + +
Sbjct: 397 RAVRMAQSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ-GIRPNAVAIAS 454

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC ++     G+ LH  ALK+       V++AL+ MY +C  +  +  +F      +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
             TWN MIS+F+QN     AL LFR +  E    + ++I S+LSAC  L  + +GK+IHG
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            V     + + F  SAL+DMY  C               K+  +W+S+I++YG +G   E
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           ++ L   M   G +    + ++L+SAC+H+G V EGL+ +  M EEY + P  EH  C+V
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+  R+GKL +A E I ++P +P  G+WGA+L AC  H + ++ +  ++ LFKL+P N G
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSG 754

Query: 759 YYISLSNMYVALGRWKDAVEIGK 781
           YY+ +SN+    GRW    ++ +
Sbjct: 755 YYVLMSNINAVAGRWDGVSKVRR 777



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 174/673 (25%), Positives = 328/673 (48%), Gaps = 48/673 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS T   +V +   +  +  GR+VH  +   G+  D  + +  + MYA  G L  +   F
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   D V WN +M G +        +  F +M  SG + +  +L+  ++ SA   +L 
Sbjct: 205 DGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLF 264

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G  +H L +K G E    V+V N+L+SMY++C  ++   + F  M   D+V+WN +I G
Sbjct: 265 FGVQLHTLAVKYGLESE--VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              NG  ++A  L  +MQ    + PD  T+V+L+    D     +G+ +HGY +R  +  
Sbjct: 323 CVQNGFVDQALLLFCDMQ-KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM 381

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+ ++++L+D Y K  ++  A+ ++++   + D+V  ++MISG            +F+ +
Sbjct: 382 DVFLVSALVDIYFKCRAVRMAQSVYDSSKAI-DVVIGSTMISGYVLNGMSQEAVKMFRYL 440

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    + +   + ++LP+C S  +++ G+ +H + LK  +       +ALM MY  CG L
Sbjct: 441 LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRL 500

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             +  +  +IS   + + WN +I +  QNG  +EA+  F+ M   +     +VT+ +V+S
Sbjct: 501 DLSHYIFSKISAKDEVT-WNSMISSFAQNGEPEEALNLFREMC-MEGVKYSNVTISSVLS 558

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L   + GK +HG+ +K  +  D   ++ALI MYG+C +++ A  VFES    N  +
Sbjct: 559 ACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I+++        ++ L RH++   F+ + ++ ++++SAC   G ++ G ++     
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF---- 674

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
                        + + Y        ++ M+  Y   GK  +A+EL  +M     +P   
Sbjct: 675 -----------RCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM---PFKPDAG 720

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVD----MLGRSGKLQEAY 711
              +LL AC     V   ++      +E + + P    +  ++     + GR   + +  
Sbjct: 721 IWGALLHACR----VHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 712 EFIKNLPIQPKPG 724
             +K+  +Q  PG
Sbjct: 777 RLMKDTKVQKIPG 789



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 276/574 (48%), Gaps = 34/574 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y+N      +  +F     +D V WN M+   V+   V   +  FG+M   G  
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCE 244

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S     + L  G  +H L++K G+ ++ ++ N  V+MYAKC  L+     
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKL 304

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D V+WN ++SGC+ N + ++ LL F +M  SG + D+V+L S + A   L   
Sbjct: 305 FGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGF 364

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + GK +H   ++        V + ++L+ +Y +C  +  A+  +      DVV  + +I 
Sbjct: 365 NQGKELHGYIVRNCVHMD--VFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+ LNG  +EA  +   + L + + P+   + +++  CA    ++ G+ +H YA++    
Sbjct: 423 GYVLNGMSQEAVKMFRYL-LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYE 481

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               + ++LMD Y+K   L  +  +F+ I+   D V+WNSMIS             LF+E
Sbjct: 482 GRCYVESALMDMYAKCGRLDLSHYIFSKIS-AKDEVTWNSMISSFAQNGEPEEALNLFRE 540

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     ++S  T+ ++L +C S  ++ +GK IH   +K     +    +AL+ MY  CG+
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  + + +   ++ S WN +I +    G  +E++   + M Q++    D VT + ++
Sbjct: 601 LEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRHM-QEEGFKADHVTFLALV 658

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITMYGRCRDI-KSASTVFES 531
           SAC     A  G+   GL L   M  + ++         ++ +Y R   + K+   + + 
Sbjct: 659 SAC-----AHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM 713

Query: 532 CYNCNLCTWNCMISAFSQNK----AEVRALELFR 561
            +  +   W  ++ A   ++    AE+ + ELF+
Sbjct: 714 PFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 227/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  + +L++ Y+     +    LF      D+VTWN MI+ CV+N  V   L  F
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + GIR DS TL+ ++ ALT +N   QG+ +H   ++  +  D  L +  V++Y KC
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  ++  +      D V  +T++SG + N   ++ +  FR +   G + + V+++S +
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +  +  G+ +H+  +K  YE   YV   ++L+ MY++CG ++ +   F  ++ KD
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I  FA NG+ EEA +L  EM  M  V+    T+ +++S CA    +  G+ +H
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREM-CMEGVKYSNVTISSVLSACASLPAIYYGKEIH 573

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  I+  +  DL   ++L+D Y K  +L  A  +F ++   N+ VSWNS+I+     GL 
Sbjct: 574 GVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE-VSWNSIIASYGAYGLV 632

Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
           KE + L              T LA++ +C     ++ G +   C   +   +        
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +Y   G L  A  L+  +    D   W  ++ AC
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHAC 729


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 226/743 (30%), Positives = 374/743 (50%), Gaps = 44/743 (5%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           LL ++      + L  G  VH  ++ AG+ A D++L    V MY        +   FS +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 135 H---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAASACLG 188
                A  + WN ++ G          LL++ +M W+   A   D+ +    V + A LG
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKM-WAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            ++ G+++H     LG +   +V   ++LI MY+  G +  A + F GM  +D V WN +
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVG--SALIKMYANGGLLWDARQVFDGMAERDCVLWNVM 218

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +DG+   G    A +L  +M+     EP+ AT+   +S+ A    L  G  +H  A++  
Sbjct: 219 MDGYVKAGSVSSAVELFGDMR-ASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYG 277

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  ++ + N+L+  Y+K   L     LF  + P +DLV+WN MISG            LF
Sbjct: 278 LESEVAVANTLVSMYAKCKCLDDGWKLFG-LMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +M     +    TL+++LP+         GK +H + ++     +   V+AL+ +Y  C
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
             +  A S+    S   D    + +I     NG  QEA+K F+ + +Q    P++V + +
Sbjct: 397 RAVRMAQSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ-GIRPNAVAIAS 454

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC ++     G+ LH  ALK+       V++AL+ MY +C  +  +  +F      +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
             TWN MIS+F+QN     AL LFR +  E    + ++I S+LSAC  L  + +GK+IHG
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHG 574

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            V     + + F  SAL+DMY  C               K+  +W+S+I++YG +G   E
Sbjct: 575 VVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKE 634

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           ++ L   M   G +    + ++L+SAC+H+G V EGL+ +  M EEY + P  EH  C+V
Sbjct: 635 SVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+  R+GKL +A E I ++P +P  G+WGA+L AC  H + ++ +  ++ LFKL+P N G
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSG 754

Query: 759 YYISLSNMYVALGRWKDAVEIGK 781
           YY+ +SN+    GRW    ++ +
Sbjct: 755 YYVLMSNINAVAGRWDGVSKVRR 777



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 175/673 (26%), Positives = 327/673 (48%), Gaps = 48/673 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS T   +V +   +  +  GR+VH  +   G+  D  + +  + MYA  G L  +   F
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVF 204

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   D V WN +M G +        +  F +M  SG + +  +L+  ++ SA   +L 
Sbjct: 205 DGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLF 264

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G  +H L +K G E    V+V N+L+SMY++C  ++   + F  M   D+V+WN +I G
Sbjct: 265 FGVQLHTLAVKYGLESE--VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              NG  ++A  L  +MQ    + PD  T+V+L+    D     +G+ +HGY +R  +  
Sbjct: 323 CVQNGFVDQALLLFCDMQ-KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM 381

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+ ++++L+D Y K  ++  A+ ++++   + D+V  ++MISG            +F+ +
Sbjct: 382 DVFLVSALVDIYFKCRAVRMAQSVYDSSKAI-DVVIGSTMISGYVLNGMSQEAVKMFRYL 440

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    + +   + ++LP+C S  +++ G+ +H + LK  +       +ALM MY  CG L
Sbjct: 441 LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRL 500

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             +  +  +IS   D   WN +I +  QNG  +EA+  F+ M   +     +VT+ +V+S
Sbjct: 501 DLSHYIFSKISAK-DEVTWNSMISSFAQNGEPEEALNLFREMC-MEGVKYSNVTISSVLS 558

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L   + GK +HG+ +K  +  D   ++ALI MYG+C +++ A  VFES    N  +
Sbjct: 559 ACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I+++        ++ L RH++   F+ + ++ ++++SAC   G ++ G ++     
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF---- 674

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
                        + + Y        ++ M+  Y   GK  +A+EL  +M     +P   
Sbjct: 675 -----------RCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM---PFKPDAG 720

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVD----MLGRSGKLQEAY 711
              +LL AC     V   ++      +E + + P    +  ++     + GR   + +  
Sbjct: 721 IWGALLHACR----VHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 712 EFIKNLPIQPKPG 724
             +K+  +Q  PG
Sbjct: 777 RLMKDTKVQKIPG 789



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 276/574 (48%), Gaps = 34/574 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y+N      +  +F     +D V WN M+   V+   V   +  FG+M   G  
Sbjct: 185 SALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCE 244

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S     + L  G  +H L++K G+ ++ ++ N  V+MYAKC  L+     
Sbjct: 245 PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKL 304

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D V+WN ++SGC+ N + ++ LL F +M  SG + D+V+L S + A   L   
Sbjct: 305 FGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGF 364

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + GK +H   ++        V + ++L+ +Y +C  +  A+  +      DVV  + +I 
Sbjct: 365 NQGKELHGYIVRNCVHMD--VFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+ LNG  +EA  +   + L + + P+   + +++  CA    ++ G+ +H YA++    
Sbjct: 423 GYVLNGMSQEAVKMFRYL-LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYE 481

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               + ++LMD Y+K   L  +  +F+ I+   D V+WNSMIS             LF+E
Sbjct: 482 GRCYVESALMDMYAKCGRLDLSHYIFSKISA-KDEVTWNSMISSFAQNGEPEEALNLFRE 540

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     ++S  T+ ++L +C S  ++ +GK IH   +K     +    +AL+ MY  CG+
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGN 600

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  + + +   ++ S WN +I +    G  +E++   + M Q++    D VT + ++
Sbjct: 601 LEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRHM-QEEGFKADHVTFLALV 658

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITMYGRCRDI-KSASTVFES 531
           SAC     A  G+   GL L   M  + ++         ++ +Y R   + K+   + + 
Sbjct: 659 SAC-----AHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDM 713

Query: 532 CYNCNLCTWNCMISAFSQNK----AEVRALELFR 561
            +  +   W  ++ A   ++    AE+ + ELF+
Sbjct: 714 PFKPDAGIWGALLHACRVHRNVELAEIASQELFK 747



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 227/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  + +L++ Y+     +    LF      D+VTWN MI+ CV+N  V   L  F
Sbjct: 277 GLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLF 336

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + GIR DS TL+ ++ ALT +N   QG+ +H   ++  +  D  L +  V++Y KC
Sbjct: 337 CDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKC 396

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  ++  +      D V  +T++SG + N   ++ +  FR +   G + + V+++S +
Sbjct: 397 RAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVL 456

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +  +  G+ +H+  +K  YE   YV   ++L+ MY++CG ++ +   F  ++ KD
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN++I  FA NG+ EEA +L  EM  M  V+    T+ +++S CA    +  G+ +H
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREM-CMEGVKYSNVTISSVLSACASLPAIYYGKEIH 573

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  I+  +  DL   ++L+D Y K  +L  A  +F ++   N+ VSWNS+I+     GL 
Sbjct: 574 GVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE-VSWNSIIASYGAYGLV 632

Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
           KE + L              T LA++ +C     ++ G +   C   +   +        
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +Y   G L  A  L+  +    D   W  ++ AC
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHAC 729


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 225/727 (30%), Positives = 369/727 (50%), Gaps = 48/727 (6%)

Query: 91  QGRVVHCLSIKAGMI---ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           +GR VH  ++  G +    D  L    V MY +CG ++ +   F+GM      SWN ++ 
Sbjct: 75  EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134

Query: 148 GCLHNNYPEKCLLYFREMGWS---GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
             L +    + +  +  M  S   G   D  +L+S + A    G+   G  +H L +K+G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAF-W-GMTCKDVVSWNAIIDGFALNGKFEEAF 262
            + S  V+  N+LI MY++CG +++A R F W     +DV SWN+++ G   NG+  EA 
Sbjct: 195 LDKSTLVA--NALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEAL 252

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL-LMMNSLMD 321
            L   MQ       +  T V ++ +CA+  LL  GR +H   ++   G +L +  N+L+ 
Sbjct: 253 ALFRGMQ-SAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLK--CGSELNIQCNALLV 309

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFS 369
            Y+K   +  A  +F  IA   D +SWNSM+S              F EML    Q   +
Sbjct: 310 MYAKYGRVDSALRVFGQIAE-KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHA 368

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
            ++++  +      L  G+  H + +K     +    N LM MYI CG +  +  + + +
Sbjct: 369 CVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM 428

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
                 S W  ++    Q+    EA++    + Q++    DS+ + +++  C  L+    
Sbjct: 429 GIRDHIS-WTTILACFAQSSRHSEALEMILEL-QKEGIMVDSMMIGSILETCCGLKSISL 486

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            K +H  A+++ + LD  ++N LI +YG C +   +  +F+     ++ +W  MI+  + 
Sbjct: 487 LKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTN 545

Query: 550 NKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N     A+ LF  ++    +P+ +++VSIL A   L  L  GKQ+HG +    F     +
Sbjct: 546 NGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV 605

Query: 607 SSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            S+L+DMYS                CK    W++MI+A G HG G +AI+LF  M  +G+
Sbjct: 606 VSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGL 665

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            P   S ++LL ACSHS LV+EG  Y + M+ +Y ++P  EH+ C+VD+LGRSG+ +EAY
Sbjct: 666 TPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAY 725

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           EFIK +P+ PK  VW A+L AC  H +  +    A  L +LEP+N G YI +SN++  +G
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785

Query: 772 RWKDAVE 778
           +W +A E
Sbjct: 786 KWNNAKE 792



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 176/609 (28%), Positives = 296/609 (48%), Gaps = 33/609 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA     T L+  Y      + +  LF     + V +WNA++ A + +      +  +
Sbjct: 95  GFLA-----TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVY 149

Query: 62  GEM---VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           G M      G   D  TL  ++ A       + G  VH L++K G+   + + N  + MY
Sbjct: 150 GAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMY 209

Query: 119 AKCGDLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           AKCG L+S+   F  +     D  SWN+++SGC+ N    + L  FR M  +G   ++ +
Sbjct: 210 AKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYT 269

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             + +   A LG LS G+ +HA  +K G E +      N+L+ MY++ G +++A R F  
Sbjct: 270 SVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC---NALLVMYAKYGRVDSALRVFGQ 326

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +SWN+++  +  N  + EA D   EM L    +PD A VV+L S       L  
Sbjct: 327 IAEKDYISWNSMLSCYVQNSFYAEAIDFFGEM-LQHGFQPDHACVVSLSSALGHLSRLNN 385

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           GR  H YAI++ L  DL + N+LMD Y K  S+  +  +F ++  + D +SW +++    
Sbjct: 386 GREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG-IRDHISWTTILACFA 444

Query: 353 -SGLFKEMLYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
            S    E L +  +     ++       +IL +C   +S+   K +HC+ ++ G   + I
Sbjct: 445 QSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLI 503

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             N L+ +Y  CG+   + +L QR+    D   W  +I  CT NG    A+  F  M Q+
Sbjct: 504 LENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEM-QK 561

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            N  PDSV LV+++ A   L    +GK +HG  ++    ++  V ++L+ MY  C  +  
Sbjct: 562 ANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNY 621

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  VFE     ++  W  MI+A   +    +A++LF+ +      P+ +S +++L AC+ 
Sbjct: 622 AIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSH 681

Query: 582 LGVLRHGKQ 590
             ++  GK 
Sbjct: 682 SKLVEEGKH 690



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 236/504 (46%), Gaps = 37/504 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+     +S+L +F +   KD ++WN+M++  V+N      + FFGEM++ G + 
Sbjct: 306 ALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQP 365

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D   ++ + SAL  ++ L  GR  H  +IK  +  D  + N  ++MY KCG +  S   F
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SW TI++    ++   + L    E+   G   D++ + S +     L  +S
Sbjct: 426 ESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS 485

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             K +H   I+ G  D   + + N LI +Y +CG+ + +   F  +  KD+VSW ++I+ 
Sbjct: 486 LLKQVHCYAIRNGLLD---LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINC 542

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              NG+   A  L  EMQ   +++PD   +V+++   A    L +G+ VHG+ IRR    
Sbjct: 543 CTNNGRLNGAVFLFTEMQ-KANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPI 601

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  +++SL+D YS   S++ A  +F   A   D+V W +MI+             LFK M
Sbjct: 602 EGPVVSSLVDMYSGCGSMNYAIRVFER-AKCKDVVLWTAMINATGMHGHGKQAIDLFKRM 660

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGK----------SIHCWQLKLGFSNNTIGVNAL 409
           L         + LA+L +C+  + +E GK           +  WQ       + +G    
Sbjct: 661 LQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILG---- 716

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
                  G    A+  ++ +  +  ++ W  ++ AC  + ++  A+     + + +  +P
Sbjct: 717 -----RSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNP 771

Query: 470 DSVTLV-NVISACGNLELAFEGKS 492
            +  LV NV +  G    A E ++
Sbjct: 772 GNYILVSNVFAEMGKWNNAKETRT 795



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 3/231 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  L     L+  Y     F+ SL LF     KD+V+W +MI  C  N  +   +  
Sbjct: 496 RNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFL 555

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM +  I+ DS  L+ I+ A+  ++ L +G+ VH   I+     +  + +  V+MY+ 
Sbjct: 556 FTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSG 615

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +N +   F    C D V W  +++    + + ++ +  F+ M  +G   D+VS  + 
Sbjct: 616 CGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLAL 675

Query: 181 VAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAA 230
           + A +    +  GK  H L I +  Y   P+      ++ +  + G  E A
Sbjct: 676 LYACSHSKLVEEGK--HYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEA 724


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 223/797 (27%), Positives = 386/797 (48%), Gaps = 75/797 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+       +  +F    N D V+W  +I   V +   +  +  F +M   G   D
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L+ ++                                   N Y   G L  +   F+
Sbjct: 243 QIALVTVI-----------------------------------NAYVALGRLADARKLFT 267

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + V+WN ++SG     + E+ + +F E+  +G +A   SL S ++A A L  L+Y
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G ++HA  IK G +D+ YV   ++L++MY++C  ++AA++ F  +  +++V WNA++ GF
Sbjct: 328 GSMVHAQAIKEGLDDNVYVG--SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A NG  +E  +    M+     +PD  T  ++ S CA    L  G  +H   I+     +
Sbjct: 386 AQNGLAQEVMEFFSYMK-RHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSN 444

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--- 369
           L + N+L+D Y+KS +L +A   F  +  ++D VSWN++I G  +E     + F F    
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFEFMK-IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 370 ---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    +L +I+ +C + +  + G+  HC  +K+G   +T   ++L+ MY+ CG ++
Sbjct: 504 SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           AA  +   + + +  S  N +I   T + H +EAI  F+ + Q     P  VT   ++  
Sbjct: 564 AARDVFYSMPYRNVVSI-NALIAGYTMS-HLEEAIHLFQEI-QMVGLKPTEVTFAGLLDG 620

Query: 481 CGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLC 538
           C    +   G+ +HG  +K   +     V  +L+ MY   +    + T+F E  Y   L 
Sbjct: 621 CDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLV 680

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  +IS ++Q     +AL+ ++H+  +   P++ +  S+L AC  +  L+ G+++H  +
Sbjct: 681 VWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLI 740

Query: 596 FHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEA 639
           FH GF  +    S+L+DMY+ C                 S  +W+SMI     +G   EA
Sbjct: 741 FHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEA 800

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +E+F +M    I P + + + +LSACSH+G V EG + ++ M+  Y ++P  +H  C+VD
Sbjct: 801 LEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVD 860

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR G L EA EFI  L  +  P +W  +L AC  HGD   GK+ A  L +L+P++   
Sbjct: 861 ILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSS 920

Query: 760 YISLSNMYVALGRWKDA 776
           Y+ LS +Y     W  A
Sbjct: 921 YVLLSGLYAESENWSGA 937



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 187/702 (26%), Positives = 342/702 (48%), Gaps = 53/702 (7%)

Query: 4   LAHLPTSTSLLT---AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + H+P   +L+T   AY  +     +  LF +  N +VV WN MI+   +       + F
Sbjct: 237 VGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISF 296

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E+ + G++   ++L  ++SA+  ++ L  G +VH  +IK G+  +  + +  VNMYAK
Sbjct: 297 FLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAK 356

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +++++  F+ +   + V WN ++ G   N   ++ + +F  M   G Q D  + +S 
Sbjct: 357 CSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSI 416

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A A L  L +G  +H + IK  +  + +V+  N+L+ MY++ G ++ A + F  M   
Sbjct: 417 FSACASLHYLDFGGQLHTVMIKNKFTSNLFVA--NALVDMYAKSGALKEARKQFEFMKIH 474

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWNAII G+      +EAF +   M +   V PD  ++ +++S CA+    ++G+  
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRM-VSNGVLPDEVSLASIVSACANVKEFKQGQQC 533

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L       +SL+D Y K   +  A  +F ++ P  ++VS N++I+G      
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSM-PYRNVVSINALIAGYTMSHL 592

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNA 408
                LF+E+  +  + +  T   +L  C+    L  G+ IH   +K GF S++ +   +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY+N      + +L   + +      W  +I    Q  H ++A++ ++ M +  N  
Sbjct: 653 LLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM-RSDNIL 711

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD  T  +V+ AC  +     G+ +H L   +   +D    ++LI MY +C D+K +  V
Sbjct: 712 PDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQV 771

Query: 529 FESCYNCN-LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           F      N + +WN MI   ++N     ALE+F+ +E +   P+E++ + +LSAC+  G 
Sbjct: 772 FHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 585 LRHGKQI----------HGHVFHLGFQEN-----SFISSALLDMYSN---CKSNAA-WSS 625
           +  G+++             V HLG   +      F++ A  + + N   CK++   WS+
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEA--EEFINKLGCKADPMLWST 889

Query: 626 MISAYGYHG---KGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
           ++ A   HG   +G  A     E+     +P  SS   LLS 
Sbjct: 890 LLGACRKHGDEVRGKRAANKLMEL-----KPQSSSSYVLLSG 926



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 209/815 (25%), Positives = 364/815 (44%), Gaps = 119/815 (14%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F     KDV  WN++++  +++      +  F  M   G+R +  T  +++SA + +  +
Sbjct: 99  FSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDI 158

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
             G+ VHC   K G    S      ++MYAKC +L  +   F G    DTVSW T+++G 
Sbjct: 159 NYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGY 218

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           + + +P + +  F +M   G   D ++L + + A   LG L+                  
Sbjct: 219 VRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLA------------------ 260

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
                               A + F  +   +VV+WN +I G A  G  EEA     E++
Sbjct: 261 -------------------DARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               ++   +++ +++S  A   +L  G  VH  AI+  L  ++ + ++L++ Y+K + +
Sbjct: 302 -KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A+ +FN++   N +V WN+M+ G             F  M     Q    T  +I  +
Sbjct: 361 DAAKQVFNSLGERN-IVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSA 419

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C S   L+FG  +H   +K  F++N    NAL+ MY   G L  A    + +  + + S 
Sbjct: 420 CASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVS- 478

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +IV   Q  +  EA   F+ M       PD V+L +++SAC N++   +G+  H L 
Sbjct: 479 WNAIIVGYVQEEYNDEAFFMFRRMV-SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLL 537

Query: 498 LKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +K  +GLDT     ++LI MY +C  + +A  VF S    N+ + N +I+ ++ +  E  
Sbjct: 538 VK--VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE-E 594

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISSALL 611
           A+ LF+ ++    +P E++   +L  C    +L  G+QIHG V   GF  +S  +  +LL
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLL 654

Query: 612 DMYSNCKSNA----------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
            MY N +  A                 W+++IS Y       +A++ +  M +  I P +
Sbjct: 655 CMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQ 714

Query: 656 SSVISLLSACSHSGLVDEGLQYY---------------NNMLEEY----DVR-------- 688
           ++  S+L AC+    +  G + +               +++++ Y    DV+        
Sbjct: 715 ATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHE 774

Query: 689 -PETEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKM 741
            P     +    M   L ++G  +EA E  K +  Q   P    +  +LSACSH G    
Sbjct: 775 MPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSE 834

Query: 742 GKQVAELL---FKLEPENVGYYISLSNMYVALGRW 773
           G++V +L+   +KL+P        L  M   LGRW
Sbjct: 835 GRKVFDLMVNNYKLQPR----VDHLGCMVDILGRW 865



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 162/627 (25%), Positives = 282/627 (44%), Gaps = 70/627 (11%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +  L   +V+H  S+K G+     L NV V++Y KCG+++ ++  FS +   D  +WN++
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S  L +      +  F  M   G + +  + +  ++A + L +++YGK +H    K+G+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGF 173

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
               +      LI MY++C ++  A   F G    D VSW  +I G+  +G   EA  + 
Sbjct: 174 GFRSFCQ--GGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVF 231

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            +MQ +  V PD   +VT+I                                   + Y  
Sbjct: 232 DKMQRVGHV-PDQIALVTVI-----------------------------------NAYVA 255

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              L+ A  LF  I P  ++V+WN MISG             F E+     + + S+L +
Sbjct: 256 LGRLADARKLFTQI-PNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +  S   L +G  +H   +K G  +N    +AL++MY  C  + AA  +   +    
Sbjct: 315 VLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER- 373

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           +   WN ++    QNG  QE ++ F  M ++    PD  T  ++ SAC +L     G  L
Sbjct: 374 NIVLWNAMLGGFAQNGLAQEVMEFFSYM-KRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H + +K+    +  V NAL+ MY +   +K A   FE     +  +WN +I  + Q +  
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A  +FR +      P+E+S+ SI+SAC  +   + G+Q H  +  +G   ++   S+L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSL 552

Query: 611 LDMYSNCKSNAAWSSMISAYGYHG--------KGW------EAIELFHEMCNSGIRPTKS 656
           +DMY  C    A   +  +  Y           G+      EAI LF E+   G++PT+ 
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKPTEV 612

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLE 683
           +   LL  C  + +++ G Q +  +++
Sbjct: 613 TFAGLLDGCDGAFMLNLGRQIHGQVMK 639



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 270/588 (45%), Gaps = 56/588 (9%)

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
           H+ + + CL + R +     QA N+         A L  LS  KVIH+  +K+G      
Sbjct: 26  HSEFLQICLQHCRRI-----QAHNLFNEKP---KAVLQALSTAKVIHSKSLKIGVGLKGL 77

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           +   N ++ +Y +CG+++ A++AF  +  KDV +WN+++  +  +G F         M  
Sbjct: 78  LG--NVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCM-W 134

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              V P+  T   ++S C+    +  G+ VH    +   G+       L+D Y+K  +L 
Sbjct: 135 NHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            A L+F+    + D VSW ++I+G  ++   + +   F  +                   
Sbjct: 195 DARLVFDGALNL-DTVSWTTLIAGYVRDGFPMEAVKVFDKM------------------- 234

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
                ++G   + I +  +++ Y+  G L  A  L  +I  N +   WN++I    + G 
Sbjct: 235 ----QRVGHVPDQIALVTVINAYVALGRLADARKLFTQIP-NPNVVAWNVMISGHAKRGF 289

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            +EAI  F  + +    +  S +L +V+SA  +L +   G  +H  A+K  +  +  V +
Sbjct: 290 AEEAISFFLELKKTGLKATRS-SLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGS 348

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EP 567
           AL+ MY +C  + +A  VF S    N+  WN M+  F+QN      +E F +++    +P
Sbjct: 349 ALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQP 408

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-------- 619
           +E +  SI SAC  L  L  G Q+H  +    F  N F+++AL+DMY+   +        
Sbjct: 409 DEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQF 468

Query: 620 -------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                  N +W+++I  Y       EA  +F  M ++G+ P + S+ S++SAC++     
Sbjct: 469 EFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFK 528

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +G Q +  +L +  +   T     ++DM  + G +  A +   ++P +
Sbjct: 529 QGQQCH-CLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYR 575



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 221/496 (44%), Gaps = 25/496 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F ++L  + +L+  Y+     + +   F      D V+WNA+I   V+          F 
Sbjct: 441 FTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFR 500

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAK 120
            MV  G+  D  +L  IVSA   +   KQG+  HCL +K G+  D+S C  +  ++MY K
Sbjct: 501 RMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGL--DTSTCAGSSLIDMYVK 558

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + ++   F  M   + VS N +++G   ++  E+ +  F+E+   G +   V+ +  
Sbjct: 559 CGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGL 617

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           +        L+ G+ IH   +K G+  S  + V  SL+ MY        +E  F  +   
Sbjct: 618 LDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM-VCVSLLCMYMNSQRFADSETLFSELQYP 676

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K +V W A+I G+A     E+A      M+   ++ PD AT  +++  CA    L+ G+ 
Sbjct: 677 KGLVVWTALISGYAQQNHHEKALQFYQHMR-SDNILPDQATFASVLRACAGMSSLQTGQE 735

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
           VH          D +  +SL+D Y+K   +  +  +F+ +   N ++SWNSMI GL K  
Sbjct: 736 VHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNG 795

Query: 358 ---EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTI 404
              E L +  Q           T L +L +C+    +  G+ +    +   KL    + +
Sbjct: 796 YAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHL 855

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G   ++ +    G L  A   + ++   +D   W+ ++ AC ++G      +    + + 
Sbjct: 856 G--CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMEL 913

Query: 465 QNASPDSVTLVNVISA 480
           +  S  S  L++ + A
Sbjct: 914 KPQSSSSYVLLSGLYA 929


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 230/722 (31%), Positives = 371/722 (51%), Gaps = 42/722 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           VH L++ +G+     L    V+ Y+  G    +   FS     D   WN+++      + 
Sbjct: 32  VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG--YEDSPYVS 212
               L   R M  SG +    +   A +ASA LG L  G  +HA  ++ G    D   V+
Sbjct: 92  FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SL+ MY++CG++  A + F  M  +DVV+W A+I G   NG+  E    L EM  + 
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211

Query: 273 ---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
              SV P+  T+ + +  C     L  GR +HGY ++  +G   +++++L   YSK  S 
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA--ILPSC---- 378
             A  LF  + P  D+VSW S+I      GL  E + L  Q   S L    IL SC    
Sbjct: 272 EDACALFLEL-PEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330

Query: 379 -NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
             +  ++  GK+ H    K  F ++ +  NAL+ MY    ++V +   + R+ H  D   
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKF-EMVDSAGRVFRLLHQRDADS 389

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV--TLVNVISACGNLELAFEGKSLHG 495
           WN+++V   + G   + ++ ++ M  +       V  +LV+ IS+C  L     G+S H 
Sbjct: 390 WNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHC 449

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEV 554
            ++K L+  D+ V N LI MYGRC     A  +F  +    ++ TWN +IS+++      
Sbjct: 450 YSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSN 509

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+ L+  +  E   PN  ++++++SAC  L  L  G++IH +V  +G+  +  I++AL+
Sbjct: 510 AAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALI 569

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C                   AW+ MIS YG HG+  +A+ELF +M    I+P   
Sbjct: 570 DMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGV 629

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + +++LSA  HSGL++EG + +  M  +Y + P  +H+ C+VD+LG+SG LQEA + +  
Sbjct: 630 TFLAILSALCHSGLLEEGRKVFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 688

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +PI+P  G+WG +LSAC  H + +MG ++A+  F  +PEN GYYI +SN Y    +W D 
Sbjct: 689 MPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKW-DE 747

Query: 777 VE 778
           +E
Sbjct: 748 IE 749



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 243/507 (47%), Gaps = 26/507 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV- 65
           +  ++SL+  Y+       ++ +F E   +DVV W A+I+ CV N     GL +  EMV 
Sbjct: 150 VAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVR 209

Query: 66  ---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
              +  +R +S T+   + A   ++ L  GR +H   +K G+     + +   +MY+KC 
Sbjct: 210 LAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCY 269

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  +   D VSW +++          + +  F++M  SG Q D + +S  ++
Sbjct: 270 STEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLS 329

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                G +  GK  HA+  K  + DS  V + N+LISMY +   +++A R F  +  +D 
Sbjct: 330 GLGNNGNVHGGKTFHAVITKRNFGDS--VLIGNALISMYGKFEMVDSAGRVFRLLHQRDA 387

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE----PDIATVVTLISLCADSLLLREGR 298
            SWN ++ G+   G   +  +L  EMQL    E     D  ++V+ IS C+    LR GR
Sbjct: 388 DSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISSCSRLAELRLGR 445

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
           S H Y+I+ LL  D  + N L+  Y +      A  +F       D+V+WN++IS     
Sbjct: 446 SAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHL 505

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   L+ +ML      + +TL+ ++ +C +  +LE G+ IH +  ++G+  +    
Sbjct: 506 GHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSIN 565

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+ MY  CG L  A  +   +  + D   WN++I     +G  ++A++ F  M +  +
Sbjct: 566 TALIDMYAKCGQLGIARRIFDSMLQH-DVVAWNVMISGYGMHGEAKQALELFGKM-EGGS 623

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSL 493
             P+ VT + ++SA  +  L  EG+ +
Sbjct: 624 IKPNGVTFLAILSALCHSGLLEEGRKV 650



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 215/468 (45%), Gaps = 26/468 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L + YS     E + ALF E   KDVV+W ++I        +   +  F +M+E G++
Sbjct: 259 SALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQ 318

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D   +  ++S L     +  G+  H +  K        + N  ++MY K   ++S+   
Sbjct: 319 PDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRV 378

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ-----ADNVSLSSAVAASA 185
           F  +H  D  SWN ++ G        KCL  +REM    +      AD  SL SA+++ +
Sbjct: 379 FRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVAD--SLVSAISSCS 436

Query: 186 CLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
            L EL  G+  H   IK L  EDS   SV N LI MY +CG  + A + F     K DVV
Sbjct: 437 RLAELRLGRSAHCYSIKHLLDEDS---SVANVLIGMYGRCGKFDHACKIFGLAKLKGDVV 493

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WN +I  +A  G    A  L  +M L+  + P+  T++T+IS CA+ + L  G  +H Y
Sbjct: 494 TWNTLISSYAHLGHSNAAMSLYDQM-LIEGLTPNSTTLITVISACANLVALERGEKIHSY 552

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
                  YD+ +  +L+D Y+K   L  A  +F+++   +D+V+WN MISG         
Sbjct: 553 VKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSML-QHDVVAWNVMISGYGMHGEAKQ 611

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF +M     + +  T LAIL +      LE G+ +     K     N      ++ 
Sbjct: 612 ALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVD 671

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           +    G L  A  ++  +    D   W  ++ AC  + +F+  ++  K
Sbjct: 672 LLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAK 719



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 182/358 (50%), Gaps = 9/358 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +    +L++ Y      +S+  +F     +D  +WN M+    +  C V  L  
Sbjct: 350 RNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLEL 409

Query: 61  FGEM-VEEGIRF--DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           + EM + +   F   + +L+  +S+ +++  L+ GR  HC SIK  +  DSS+ NV + M
Sbjct: 410 YREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGM 469

Query: 118 YAKCGDLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           Y +CG  + + C   G+     D V+WNT++S   H  +    +  + +M   G   ++ 
Sbjct: 470 YGRCGKFDHA-CKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNST 528

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L + ++A A L  L  G+ IH+   ++G++    VS+  +LI MY++CG +  A R F 
Sbjct: 529 TLITVISACANLVALERGEKIHSYVKEMGWDYD--VSINTALIDMYAKCGQLGIARRIFD 586

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M   DVV+WN +I G+ ++G+ ++A +L  +M+   S++P+  T + ++S    S LL 
Sbjct: 587 SMLQHDVVAWNVMISGYGMHGEAKQALELFGKME-GGSIKPNGVTFLAILSALCHSGLLE 645

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           EGR V     +  L  +L     ++D   KS  L +AE +  A+    D   W +++S
Sbjct: 646 EGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLS 703


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 216/710 (30%), Positives = 359/710 (50%), Gaps = 36/710 (5%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           V+H  +I  G+  D    N+ +++YAK G +  +   F  +   D VSW  ++SG   N 
Sbjct: 63  VIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNG 122

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
             E+ +  + +M  SG       LSS ++A         G+++HA   K G        V
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG--SCSETVV 180

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+LI++Y + G +  AER F  M   D V++N +I   A  G  E A ++  EM+L   
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRL-SG 239

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
             PD  T+ +L++ CA    L +G+ +H Y ++  +  D ++  SL+D Y K   + +A 
Sbjct: 240 WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL 299

Query: 334 LLFNAIAPMNDLVSWNSM------ISGLFKEMLYLCSQFSFS------TLLAILPSCNSP 381
            +F +     ++V WN M      IS L K     C   +        T   +L +C   
Sbjct: 300 EIFKS-GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
             +  G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W  +
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILE-VLEAKDVVSWTSM 417

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    Q+   +EA++TFK M Q     PD++ L + ISAC  ++   +G+ +H     S 
Sbjct: 418 IAGYVQHEFCKEALETFKDM-QLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
              D  + NAL+ +Y RC   K A ++FE+  + +  TWN M+S F+Q+     ALE+F 
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536

Query: 562 HL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            +     + N  + VS +SA   L  ++ GKQIH  V   G    + +++AL+ +Y  C 
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCG 596

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         +++ +W+++I++   HG G EA++LF +M   G++P   + I +L+
Sbjct: 597 SIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLA 656

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH GLV+EGL Y+ +M  E+ + P  +H+ C+VD+LGR+G+L  A +F++ +P+    
Sbjct: 657 ACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANA 716

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
            VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y   G+W
Sbjct: 717 MVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKW 766



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 171/591 (28%), Positives = 290/591 (49%), Gaps = 21/591 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+     + +  +F +   +D V+W AM++    N      +  + +M   G+   
Sbjct: 83  LIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT 142

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L  ++SA T+    +QGR+VH    K G  +++ + N  + +Y + G L+ +E  FS
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   D V++NT++S        E  L  F EM  SG   D V+++S +AA A +G+L+ 
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H+  +K G   SP   +  SL+ +Y +CG I  A   F      +VV WN ++  +
Sbjct: 263 GKQLHSYLLKAGM--SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAY 320

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
                  ++FDL  +M +   V P+  T   L+  C  +  +  G  +H  +I+     D
Sbjct: 321 GQISDLAKSFDLFCQM-VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           + +   L+D YSK   L KA  +   +    D+VSW SMI+G             FK+M 
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEA-KDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                     L + + +C   +++  G+ IH      G+S +    NAL+++Y  CG   
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSK 498

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            AFSL + I H  D   WN ++    Q+G ++EA++ F  M  Q     +  T V+ ISA
Sbjct: 499 EAFSLFEAIEHK-DKITWNGMVSGFAQSGLYEEALEVFIKMY-QAGVKYNVFTFVSSISA 556

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
             NL    +GK +H   +K+    +T V NALI++YG+C  I+ A   F      N  +W
Sbjct: 557 SANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSW 616

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           N +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G++  G
Sbjct: 617 NTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEG 667



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 221/479 (46%), Gaps = 62/479 (12%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL  Y        +L +F      +VV WN M+ A  +   +      F +MV  G+R 
Sbjct: 284 SLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRP 343

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T   ++   T    +  G  +H LSIK G  +D  +  V ++MY+K G L+ +    
Sbjct: 344 NEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL 403

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSW ++++G + + + ++ L  F++M   G   DN+ L+SA++A A +  + 
Sbjct: 404 EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMR 463

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH+     GY  S  VS+ N+L+++Y++CG  + A   F  +  KD ++WN ++ G
Sbjct: 464 QGQQIHSRVYVSGY--SADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSG 521

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA +G +EEA ++  +M     V+ ++ T V+ IS  A+   +++G+ +H   I+     
Sbjct: 522 FAQSGLYEEALEVFIKM-YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTS 580

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
           +  + N+L+  Y K  S+  A++ F  ++  N  VSWN++I+         CSQ      
Sbjct: 581 ETEVANALISLYGKCGSIEDAKMQFFEMSERNH-VSWNTIITS--------CSQ------ 625

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
                              H W           G+ AL        DL   F  +++   
Sbjct: 626 -------------------HGW-----------GLEAL--------DL---FDQMKQEGL 644

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACGNLELA 487
             +   +  V+ AC+  G  +E +  FKSM+ +    P       +V+++   G L+ A
Sbjct: 645 KPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRA 703



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 155/296 (52%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS   + + +  +      KDVV+W +MI   V++      L  F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   GI  D+  L   +SA   +  ++QG+ +H     +G  AD S+ N  VN+YA+C
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D ++WN ++SG   +   E+ L  F +M  +G + +  +  S++
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ASA L ++  GK IHA  IK G   +    V N+LIS+Y +CG IE A+  F+ M+ ++
Sbjct: 555 SASANLADIKQGKQIHATVIKTGC--TSETEVANALISLYGKCGSIEDAKMQFFEMSERN 612

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            VSWN II   + +G   EA DL  +M+    ++P+  T + +++ C+   L+ EG
Sbjct: 613 HVSWNTIITSCSQHGWGLEALDLFDQMK-QEGLKPNDVTFIGVLAACSHVGLVEEG 667


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 202/612 (33%), Positives = 328/612 (53%), Gaps = 42/612 (6%)

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           +LG++LG          N+ ++M+ + G++  A   F  M+ +++ SWN ++ G+A  G 
Sbjct: 126 SLGVELG----------NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY 175

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F+EA  L H M  +  V+PD+ T   ++  C     L  G+ VH + +R     D+ ++N
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS 369
           +L+  Y K   +  A LLF+ + P  D++SWN+MISG F+        E+ +     S  
Sbjct: 236 ALITMYVKCGDVKSARLLFDRM-PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               TL +++ +C        G+ IH + +  GF+ +    N+L  MY+N G    A  L
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             R+    D   W  +I     N    +AI T++ M  Q +  PD +T+  V+SAC  L 
Sbjct: 355 FSRMERK-DIVSWTTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLG 412

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G  LH LA+K+ +     V N LI MY +C+ I  A  +F +    N+ +W  +I+
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472

Query: 546 AFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
               N     AL   R ++   +PN I++ + L+AC ++G L  GK+IH HV   G   +
Sbjct: 473 GLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532

Query: 604 SFISSALLDMYSNC-KSNAAWSS-------------MISAYGYHGKGWEAIELFHEMCNS 649
            F+ +ALLDMY  C + N AWS              +++ Y   G+G   +ELF  M  S
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKS 592

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            +RP + + ISLL  CS S +V +GL Y++ M E+Y V P  +H+ C+VD+LGR+G+LQE
Sbjct: 593 RVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQE 651

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A++FI+ +P+ P P VWGA+L+AC  H    +G+  A+ +F+L+ ++VGYYI L N+Y  
Sbjct: 652 AHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYAD 711

Query: 770 LGRWKDAVEIGK 781
            G+W++  ++ +
Sbjct: 712 CGKWREVAKVRR 723



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 260/548 (47%), Gaps = 24/548 (4%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +     M E  +  D    + +V         ++G  V+ +++ +       L N F+ 
Sbjct: 78  AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNV 175
           M+ + G+L  +   F  M   +  SWN ++ G     Y ++ +  +  M W  G + D  
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +    +     + +L+ GK +H   ++ GYE    + V N+LI+MY +CGD+++A   F 
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD--IDVVNALITMYVKCGDVKSARLLFD 255

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  +D++SWNA+I G+  NG   E  +L   M+ + SV+PD+ T+ ++IS C      R
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRR 314

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            GR +H Y I      D+ + NSL   Y  + S  +AE LF+ +    D+VSW +MISG 
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGY 373

Query: 356 FKEML--------YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
               L         +  Q S      T+ A+L +C +   L+ G  +H   +K    +  
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           I  N L++MY  C  +  A  +   I   +  S W  +I     N    EA+   + M  
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFEALIFLRQM-- 490

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    P+++TL   ++AC  +     GK +H   L++ +GLD  + NAL+ MY RC  + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           +A + F S    ++ +WN +++ +S+       +ELF  +      P+EI+ +S+L  C+
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609

Query: 581 QLGVLRHG 588
           +  ++R G
Sbjct: 610 KSQMVRQG 617



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 235/475 (49%), Gaps = 21/475 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV-EEGIRFDSTTLLIIVSALTQMN 87
           +F +   +++ +WN ++    +       +  +  M+   G++ D  T   ++     + 
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L +G+ VH   ++ G   D  + N  + MY KCGD+ S+   F  M   D +SWN ++S
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N    + L  F  M       D ++L+S ++A   LG+   G+ IHA  I  G+  
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF-- 328

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  +SV NSL  MY   G    AE+ F  M  KD+VSW  +I G+  N   ++A D  + 
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID-TYR 387

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKS 326
           M    SV+PD  TV  ++S CA    L  G  +H  AI+ RL+ Y +++ N+L++ YSK 
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY-VIVANNLINMYSKC 446

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCS-----QFSFSTLLAIL 375
             + KA  +F+ I P  +++SW S+I+GL      F+ +++L       Q +  TL A L
Sbjct: 447 KCIDKALDIFHNI-PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAAL 505

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    +L  GK IH   L+ G   +    NAL+ MY+ CG +  A+S  Q  S   D 
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS--QFNSQKKDV 563

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           + WNI++   ++ G     ++ F  M + +   PD +T ++++  C   ++  +G
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSR-VRPDEITFISLLCGCSKSQMVRQG 617



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 217/456 (47%), Gaps = 18/456 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +    +L+T Y      +S+  LF     +D+++WNAMI+   EN     GL  F
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    +  D  TL  ++SA   +   + GR +H   I  G   D S+CN    MY   
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +E  FS M   D VSW T++SG  +N  P+K +  +R M     + D +++++ +
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG+L  G  +H L IK       YV V N+LI+MYS+C  I+ A   F  +  K+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARL--ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW +II G  LN +  EA   L +M++  +++P+  T+   ++ CA    L  G+ +H
Sbjct: 464 VISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAACARIGALMCGKEIH 521

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +R  +G D  + N+L+D Y +   ++ A   FN  +   D+ SWN +++G       
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQG 579

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  M+    +    T +++L  C+  + +  G          G + N      +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           + +    G+L  A   +Q++    D + W  ++ AC
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 58/375 (15%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG  +EA+K   SM Q+   + D    V ++  C       EG  ++ +AL S+  L   
Sbjct: 72  NGKLEEAMKLLNSM-QELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
           + NA + M+ R  ++  A  VF      NL +WN ++  +++      A+ L+  + +  
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
             +P+  +   +L  C  +  L  GK++H HV   G++ +  + +AL+ MY  C      
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-- 666
                    +   +W++MIS Y  +G   E +ELF  M    + P   ++ S++SAC   
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 667 ---------HSGLVDEGL-----------QYYNNM-----LEEYDVRPETEHHVCIVDML 701
                    H+ ++  G            Q Y N       E+   R E +  V    M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 702 GR------SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
                     K  + Y  +    ++P      A+LSAC+  GD   G ++ +L  K    
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK--AR 428

Query: 756 NVGYYI---SLSNMY 767
            + Y I   +L NMY
Sbjct: 429 LISYVIVANNLINMY 443


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 233/724 (32%), Positives = 369/724 (50%), Gaps = 43/724 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+Q   +H   I   +  D       +  Y++ GDL SS   F   H  D+  W  ++  
Sbjct: 14  LRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKS 73

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + N   ++ +  + +M     QA++ +  S + A +  G+L  G+ +H   IK G++  
Sbjct: 74  HVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMD 133

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P V+   +L+S+Y + G +++A + F  M  +D+VSW++II     NG+  E  D    M
Sbjct: 134 PVVN--TALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCM 191

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +     PD   V+T++  C +  +LR  +S HGY ++R +  D  + +SL+  Y+K  S
Sbjct: 192 -VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGS 250

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILP 376
           L  AE++F  +       +W +MIS     G  KE L L      +       T+  IL 
Sbjct: 251 LRSAEIVFENVT-YRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILR 309

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN---S 433
           SC +   L  GKS+HC  +K     N   ++ L    +      A   L ++I H     
Sbjct: 310 SCTNLSLLREGKSVHCVVIKNDLDAN---LDCLGPTLLELYAATAKHDLCEKILHEIGGR 366

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             + WN +I    Q G  +E +  F  M Q+Q   PDS +L + +SA GN      G  +
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRM-QKQGFMPDSFSLASSLSASGNEGELQLGLQI 425

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG  +K    +D  V N+LI MY +C  +  A  +F+      + TWN MIS  SQN   
Sbjct: 426 HGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYS 484

Query: 554 VRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            +A+ LF  +     E  E++ VS++ AC+ LG L  GK IH  +   G ++  FI +AL
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETAL 544

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               +S  +WSS+IS+YG HG+  E I LF +M  SGI+P  
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPND 604

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +V+++LSACSH+G V EG+ ++N+M  ++ + P+ EH VCIVD+L R+G L EAYE IK
Sbjct: 605 VTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIK 663

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P  P   +WGA+L+ C  H    + K +   L+ ++ ++ G+Y  LSN+Y A G W +
Sbjct: 664 LMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNE 723

Query: 776 AVEI 779
             E+
Sbjct: 724 FGEV 727



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 18/501 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      +T+LL+ Y  + Y +S+  +F E   +D+V+W+++I++ VEN  +  GL  F
Sbjct: 129 GFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAF 188

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MV EG   DS  +L +V A  ++  L+  +  H   +K G+  D  + +  + MYAKC
Sbjct: 189 RCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKC 248

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L S+E  F  +    T +W  ++S      Y ++ L  F  M  +  + ++V++   +
Sbjct: 249 GSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIIL 308

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  GK +H + IK    D+    +  +L+ +Y+     +  E+    +  + 
Sbjct: 309 RSCTNLSLLREGKSVHCVVIKNDL-DANLDCLGPTLLELYAATAKHDLCEKILHEIGGRG 367

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +  WN +I  +A  G  +E  DL   MQ  +   PD  ++ + +S   +   L+ G  +H
Sbjct: 368 IAVWNTLISVYAQKGLLKETVDLFVRMQ-KQGFMPDSFSLASSLSASGNEGELQLGLQIH 426

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ I+R    D  + NSL++ YSK   +  A ++F+ + P   +V+WNSMISG       
Sbjct: 427 GHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEP-KGVVTWNSMISGLSQNGYS 484

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  M   C +      ++++ +C+    LE GK IH   +  G         AL
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETAL 544

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CGDL  A  +   +S  S  S W+ +I +   +G   E I  F  M  +    P
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQISEVIFLFSKML-ESGIKP 602

Query: 470 DSVTLVNVISACGNLELAFEG 490
           + VT++NV+SAC +     EG
Sbjct: 603 NDVTVMNVLSACSHAGCVKEG 623



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 232/506 (45%), Gaps = 45/506 (8%)

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMN 343
           + L   S  LR+   +H + I   L  D L    L++ YS+   L  +  +F    +P  
Sbjct: 5   MPLFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSP-- 62

Query: 344 DLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           D   W  ++              L+ +ML    Q +  T  ++L +C+    L  G+ +H
Sbjct: 63  DSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVH 122

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              +K GF  + +   AL+ +Y   G L +A  +   +    D   W+ +I +  +NG  
Sbjct: 123 GRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLR-DLVSWSSIISSVVENGEI 181

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            E +  F+ M   +  +PDSV ++ V+ ACG L +    KS HG  LK  +  D  V ++
Sbjct: 182 NEGLDAFRCMV-SEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS 240

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPN 568
           LI MY +C  ++SA  VFE+    +  TW  MIS+++       AL LF   +  E EPN
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPN 300

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN-SFISSALLDMYSNCKSN------- 620
            +++  IL +CT L +LR GK +H  V       N   +   LL++Y+    +       
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360

Query: 621 --------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                   A W+++IS Y   G   E ++LF  M   G  P   S+ S LSA  + G + 
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQ 420

Query: 673 EGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAM 729
            GLQ + ++++    RP  + +V   +++M  + G +  AY     +  +PK  V W +M
Sbjct: 421 LGLQIHGHVIK----RPFMDEYVFNSLINMYSKCGYVDLAYMIFDQM--EPKGVVTWNSM 474

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPE 755
           +S  S +G +     + +L++   PE
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPE 500


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/591 (34%), Positives = 313/591 (52%), Gaps = 54/591 (9%)

Query: 224 CGDIEA-----AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           CG +E+     A   F  M   D   WN II G+  NG F+EA D  + M+    +  D 
Sbjct: 66  CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMEC-EGIRSDN 124

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T   +I  C + L L  G+ VHG  I+     D+ + N L+D Y K   +  AE +F+ 
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDE 184

Query: 339 IAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           + P+ DLVSWNSM+SG             FKEML L ++     +++ L +C+    L  
Sbjct: 185 M-PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRS 243

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G  IHC  ++     + +   +L+ MY  CG +  A  +  RI ++ +   WN +I    
Sbjct: 244 GMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRI-YSKNIVAWNAMI---- 298

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
             G  QE  K            PD +T++N++ +C       EGKS+HG A++ +     
Sbjct: 299 --GGMQEDDKVI----------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYL 346

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
            ++ AL+ MYG+C ++K A  VF      N+ +WN M++A+ QN+    AL++F+H+   
Sbjct: 347 VLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNE 406

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
             +P+ I+I S+L A  +L     GKQIH ++  LG   N+FIS+A++ MY+ C      
Sbjct: 407 PLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTA 466

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K   +W++MI AY  HG G  +I+ F EM   G +P  S+ +SLL+ACS S
Sbjct: 467 REFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSIS 526

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GL+DEG  ++N+M  EY + P  EH+ C++D+LGR+G L EA  FI+ +P+ P   +WG+
Sbjct: 527 GLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGS 586

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +L+A  +H D  + +  A  +  L+ +N G Y+ LSNMY   GRW+D   I
Sbjct: 587 LLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRI 637



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 252/474 (53%), Gaps = 12/474 (2%)

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           + + G + ++   F  M+ +DT  WN I+ G  +N   ++ + ++  M   G ++DN + 
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
              + A   L  L  G+ +H   IK+G++   Y  V N LI MY + G IE AE+ F  M
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVY--VCNFLIDMYLKIGFIELAEKVFDEM 185

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D+VSWN+++ G+ ++G    +     EM L    + D   +++ +  C+    LR G
Sbjct: 186 PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEM-LRLGNKADRFGMISALGACSIEHCLRSG 244

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
             +H   IR  L  D+++  SL+D Y K   +  AE +FN I   N +V+WN+MI G+ +
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKN-IVAWNAMIGGMQE 303

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +   +       T++ +LPSC+   +L  GKSIH + ++  F    +   AL+ MY  CG
Sbjct: 304 DDKVIPDVI---TMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A  +  +++  +  S WN ++ A  QN  ++EA+K F+ +  +    PD++T+ +V
Sbjct: 361 ELKLAEHVFNQMNEKNMVS-WNTMVAAYVQNEQYKEALKMFQHILNEP-LKPDAITIASV 418

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + A   L    EGK +H   +K  +G +T + NA++ MY +C D+++A   F+     ++
Sbjct: 419 LPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDV 478

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
            +WN MI A++ +     +++ F  +    F+PN  + VS+L+AC+  G++  G
Sbjct: 479 VSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 270/555 (48%), Gaps = 39/555 (7%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           ++L +F +  + D   WN +I     N      + F+  M  EGIR D+ T   ++ A  
Sbjct: 76  NALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACG 135

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           ++  L  G+ VH   IK G   D  +CN  ++MY K G +  +E  F  M   D VSWN+
Sbjct: 136 ELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNS 195

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++SG   +      L+ F+EM   G +AD   + SA+ A +    L  G  IH   I+  
Sbjct: 196 MVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSE 255

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            E    + V  SLI MY +CG ++ AER F  +  K++V+WNA+I G             
Sbjct: 256 LELD--IMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG------------- 300

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
              MQ    V PD+ T++ L+  C+ S  L EG+S+HG+AIR++    L++  +L+D Y 
Sbjct: 301 ---MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYG 357

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K   L  AE +FN +   N +VSWN+M++             +F+ +L    +    T+ 
Sbjct: 358 KCGELKLAEHVFNQMNEKN-MVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIA 416

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++LP+     S   GK IH + +KLG  +NT   NA+++MY  CGDL  A      +   
Sbjct: 417 SVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMV-C 475

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN +I+A   +G  + +I+ F  M + +   P+  T V++++AC    L  EG  
Sbjct: 476 KDVVSWNTMIMAYAIHGFGRTSIQFFSEM-RGKGFKPNGSTFVSLLTACSISGLIDEGWG 534

Query: 493 LHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESCYNCNLCT-WNCMISAFSQ 549
               ++K   G+D  +++   ++ + GR  ++  A    E          W  +++A S+
Sbjct: 535 FFN-SMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAA-SR 592

Query: 550 NKAEVRALEL-FRHL 563
           N  +V   EL  RH+
Sbjct: 593 NHNDVVLAELAARHI 607



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 193/390 (49%), Gaps = 31/390 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +     L+  Y  + + E +  +F E   +D+V+WN+M++    +   +  L  F
Sbjct: 154 GFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCF 213

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+  G + D   ++  + A +  +CL+ G  +HC  I++ +  D  +    ++MY KC
Sbjct: 214 KEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKC 273

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +E  F+ ++  + V+WN ++ G   +   +K +             D +++ + +
Sbjct: 274 GKVDYAERVFNRIYSKNIVAWNAMIGGMQED---DKVI------------PDVITMINLL 318

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + +  G L  GK IH   I+  +   PY+ +  +L+ MY +CG+++ AE  F  M  K+
Sbjct: 319 PSCSQSGALLEGKSIHGFAIRKMF--LPYLVLETALVDMYGKCGELKLAEHVFNQMNEKN 376

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN ++  +  N +++EA  +   + L   ++PD  T+ +++   A+     EG+ +H
Sbjct: 377 MVSWNTMVAAYVQNEQYKEALKMFQHI-LNEPLKPDAITIASVLPAVAELASRSEGKQIH 435

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y ++  LG +  + N+++  Y+K   L  A   F+ +    D+VSWN+MI         
Sbjct: 436 SYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMV-CKDVVSWNTMIMAYAIHGFG 494

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCN 379
                 F EM     + + ST +++L +C+
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACS 524



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 118/230 (51%), Gaps = 3/230 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FL +L   T+L+  Y      + +  +F +   K++V+WN M+ A V+N      L  F 
Sbjct: 342 FLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQ 401

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            ++ E ++ D+ T+  ++ A+ ++    +G+ +H   +K G+ +++ + N  V MYAKCG
Sbjct: 402 HILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCG 461

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           DL ++   F GM C D VSWNT++     + +    + +F EM   G + +  +  S + 
Sbjct: 462 DLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLT 521

Query: 183 ASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           A +  G +  G    +++ ++ G +  P +     ++ +  + G+++ A+
Sbjct: 522 ACSISGLIDEGWGFFNSMKVEYGID--PGIEHYGCMLDLLGRNGNLDEAK 569


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 234/778 (30%), Positives = 389/778 (50%), Gaps = 39/778 (5%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F +  N  ++ +N+ I A  +       ++ +  +++ G++ D  T   ++ A T     
Sbjct: 56  FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
            +G  ++   +  G+  D  +    ++M+ K G L+++   F  M   D V WN ++SG 
Sbjct: 116 HEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL 175

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
             +  P + L  F  M   G + D VS+ +   A + LG++   K IH   ++     S 
Sbjct: 176 SQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVR----RSI 231

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              V+NSLI MY +CGD+ +A+R F  M  +D VSW  ++ G+  NG + E   LLH+M+
Sbjct: 232 CGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMR 291

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
              +V+ +   VV  + + A+   L +G+ ++ YA++  L  D+++   ++  Y+K   L
Sbjct: 292 -RGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGEL 350

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFSTL------LAILPS- 377
            KA  LF ++    DLV+W++ +S L      +E+L +     +  L      L+IL S 
Sbjct: 351 KKARELFLSLEG-RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSG 409

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C    ++  GK +HC+ +K    ++   V  L+ MYI       A +L  R+    D   
Sbjct: 410 CTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRM-QIKDIVV 468

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I   T+ G    A++ F  + Q     PDS T+V + SAC  ++    G  LHG  
Sbjct: 469 WNTLINGFTKYGDPHLALEMFNRL-QLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGI 527

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRA 556
            KS    D  V+ AL+ MY +C  + S   +F    +  +  +WN MI+ +  N     A
Sbjct: 528 EKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEA 587

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           +  FR ++ E   PN ++ V+IL A + L +LR     H  +  +GF   + I ++L+DM
Sbjct: 588 ISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDM 647

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               K   +W++M+SAY  HG+G  A+ LF  M  S +R    S 
Sbjct: 648 YAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSY 707

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           IS+LSAC HSGL+ EG   + +M E++ V P  EH+ C+VD+LG +G   E    +  + 
Sbjct: 708 ISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMT 767

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
            +P   VWGA+L+AC  H +  +G+     L KLEP N  +++ LS++Y   GRW DA
Sbjct: 768 TEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDA 825



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 190/736 (25%), Positives = 342/736 (46%), Gaps = 53/736 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  +  +   +++  +F +   KD V WNAMI+   ++      L  F  M  EG  
Sbjct: 138 TSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFE 197

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC----NVFVNMYAKCGDLNS 126
            D  ++L +  A++++     G V  C SI  G +   S+C    N  ++MY KCGD++S
Sbjct: 198 VDKVSILNLAPAVSRL-----GDVGCCKSIH-GYVVRRSICGVVSNSLIDMYCKCGDVHS 251

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           ++  F  M   D VSW T+M+G + N    + L    +M     + + V++ +A+   A 
Sbjct: 252 AQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAE 311

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           + +L  GK I+   +++G      + V   ++ MY++CG+++ A   F  +  +D+V+W+
Sbjct: 312 MRDLEKGKEIYNYALQMGLMSD--IVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWS 369

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A +      G   E   +   MQ    ++PD A +  L+S C +   +  G+ +H YAI+
Sbjct: 370 AFLSALVETGYPREVLSIFQVMQY-EGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIK 428

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-----MLY 361
             +  D+ M+ +L+  Y +    + A  LFN +  + D+V WN++I+G  K       L 
Sbjct: 429 ADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ-IKDIVVWNTLINGFTKYGDPHLALE 487

Query: 362 LCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           + ++   S       T++ +  +C   + L+ G  +H    K GF ++     ALM MY 
Sbjct: 488 MFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYA 547

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L +   L     H  D   WN++I     NG+  EAI TF+ M + +N  P+ VT 
Sbjct: 548 KCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRM-KLENVRPNLVTF 606

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V ++ A   L +  E  + H   ++      T + N+LI MY +C  ++ +   F    N
Sbjct: 607 VTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMEN 666

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            +  +WN M+SA++ +     A+ LF  ++      + +S +S+LSAC   G+++ G  I
Sbjct: 667 KDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDI 726

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                           +++ + +    S   ++ M+   G  G   E + L ++M     
Sbjct: 727 F---------------ASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTT--- 768

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            P      +LL+AC     V  G    +++L+     P   HHV + D+  + G+  +A 
Sbjct: 769 EPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNP--VHHVVLSDIYAQCGRWNDAR 826

Query: 712 E---FIKNLPIQPKPG 724
                I N  ++  PG
Sbjct: 827 RTRSHINNHGLKKIPG 842



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 235/494 (47%), Gaps = 17/494 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S SL+  Y       S+  +F     +D V+W  M+   V+N C   GL    +M    
Sbjct: 235 VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGN 294

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ +   ++  +  + +M  L++G+ ++  +++ G+++D  +    V MYAKCG+L  + 
Sbjct: 295 VKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKAR 354

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D V+W+  +S  +   YP + L  F+ M + G + D   LS  V+    + 
Sbjct: 355 ELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEIS 414

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  GK++H   IK   E    +S+  +L+SMY +      A   F  M  KD+V WN +
Sbjct: 415 NIGLGKIMHCYAIKADMESD--ISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTL 472

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I+GF   G    A ++ + +QL   + PD  T+V L S CA    L  G  +HG   +  
Sbjct: 473 INGFTKYGDPHLALEMFNRLQL-SGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSG 531

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------F 356
              D+ +  +LMD Y+K  SL   E LF     + D VSWN MI+G             F
Sbjct: 532 FESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTF 591

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           + M     + +  T + ILP+ +    L    + H   +++GF + T+  N+L+ MY  C
Sbjct: 592 RRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKC 651

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  +      +  N DT  WN ++ A   +G  + A+  F S+ Q+ N   DSV+ ++
Sbjct: 652 GQLRYSEKCFHEME-NKDTISWNAMLSAYAMHGQGELAVALF-SVMQESNVRVDSVSYIS 709

Query: 477 VISACGNLELAFEG 490
           V+SAC +  L  EG
Sbjct: 710 VLSACRHSGLIQEG 723



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 236/518 (45%), Gaps = 20/518 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++ +  +T ++  Y+     + +  LF     +D+V W+A ++A VE       L  F
Sbjct: 329 GLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIF 388

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D   L I+VS  T+++ +  G+++HC +IKA M +D S+    V+MY + 
Sbjct: 389 QVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRF 448

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                +   F+ M   D V WNT+++G      P   L  F  +  SG   D+ ++    
Sbjct: 449 ELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLF 508

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
           +A A + +L  G  +H    K G+E   +V V  +L+ MY++CG + + ER F      K
Sbjct: 509 SACAIMDDLDLGTCLHGGIEKSGFESDIHVKV--ALMDMYAKCGSLCSVERLFLLTKHVK 566

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWN +I G+  NG   EA      M+L  +V P++ T VT++   +   +LRE  + 
Sbjct: 567 DEVSWNVMIAGYLHNGYSNEAISTFRRMKL-ENVRPNLVTFVTILPAVSYLSILREAMAF 625

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
           H   IR       L+ NSL+D Y+K   L  +E  F+ +    D +SWN+M+S       
Sbjct: 626 HTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMEN-KDTISWNAMLSAYAMHGQ 684

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF  M     +    + +++L +C     ++ G  I     +      ++   A
Sbjct: 685 GELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYA 744

Query: 409 LMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            M   + C  L     SLL +++   D   W  ++ AC  + +          + + +  
Sbjct: 745 CMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPR 804

Query: 468 SP-DSVTLVNVISACGNLELAFEGKS-LHGLALKSLMG 503
           +P   V L ++ + CG    A   +S ++   LK + G
Sbjct: 805 NPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPG 842


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 358/717 (49%), Gaps = 36/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  S+  G+ AD  + N+ +++YAK G +  +   F  +   D VSW  ++SG   +  
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGL 124

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            ++    + +M W+        LSS ++A       + G++IHA   K  +    +V   
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG-- 182

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LI++Y   G  + AER F  M   D V++N +I G A  G  E A  +  EMQL   +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGL 241

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  TV +L++ CA    L++G+ +H Y ++  + +D +   SL+D Y K   +  A  
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +FN +    ++V WN M+              +F +M       +  T   IL +C    
Sbjct: 302 IFN-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +E G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W  +I
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMI 419

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q+   +EA+ TFK M Q     PD++ L +  SAC  ++   +G  +H     S  
Sbjct: 420 AGYVQHDFCEEALATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  + N L+ +Y RC   + A ++F    + +  TWN +IS F Q++   +AL +F  
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK 538

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +     + N  + +S +SA   L  ++ GKQ+HG     G    + +++AL+ +Y  C  
Sbjct: 539 MGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        ++  +W+++I++   HG+G EA++LF +M   G++P   + I +L+A
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH GLV+EGL Y+ +M   Y + P  +H+ C+VD+LGR+G+L  A  F+  +PI     
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM 718

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +W  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y   G+W +  ++ K
Sbjct: 719 IWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 775



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 293/604 (48%), Gaps = 23/604 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  A       L+  Y+       +  +F E  ++D V+W AM++   ++         
Sbjct: 72  RGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRL 131

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M    +      L  ++SA T+     QGR++H    K    +++ + N  + +Y  
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G    +E  F  M   D V++NT++SG     + E  L  F EM  SG + D V+++S 
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A +G+L  GK +H+  +K G     Y++   SL+ +Y +CGDIE A   F      
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMS-FDYIT-EGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN ++  +       ++F++  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQAT-GIHPNQFTYPCILRTCTCTGQIELGEQI 368

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +I+     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEK-RDVVSWTSMIAGYVQHDF 427

Query: 356 -------FKEMLYLCSQFSFSTLLAILPS-CNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  FKEM   C  +  +  LA   S C   +++  G  IH      G++ +    N
Sbjct: 428 CEEALATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+++Y  CG    AFSL + I H  + + WN +I    Q+  +++A+  F  M  Q  A
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIEHKDEIT-WNGLISGFGQSRLYKQALMVFMKMG-QAGA 544

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             +  T ++ ISA  NL    +GK +HG A+K+    +T V NALI++YG+C  I+ A  
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           +F      N  +WN +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G+
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664

Query: 585 LRHG 588
           +  G
Sbjct: 665 VEEG 668



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 219/460 (47%), Gaps = 37/460 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  SLL  Y      E++  +F      +VV WN M+ A  +   +      FG+M   G
Sbjct: 282 TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG 341

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  +  T   I+   T    ++ G  +H LSIK G  +D  +  V ++MY+K G L+ + 
Sbjct: 342 IHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKAR 401

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
                +   D VSW ++++G + +++ E+ L  F+EM   G   DN+ L+SA +A A + 
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIK 461

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G  IHA     GY  +  +S+ N+L+++Y++CG  E A   F  +  KD ++WN +
Sbjct: 462 AMRQGLQIHARVYVSGY--AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGL 519

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF  +  +++A  +  +M      + ++ T ++ IS  A+   +++G+ VHG A++  
Sbjct: 520 ISGFGQSRLYKQALMVFMKMG-QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              +  + N+L+  Y K  S+  A+++F+ ++  N+ VSWN++I+             LF
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHGRGLEALDLF 637

Query: 357 KEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            +M     + +  T + +L +C+      E L + KS+          +N  G+N +   
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM----------SNVYGLNPIPDH 687

Query: 413 YI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           Y          G L  A   +  +   ++   W  ++ AC
Sbjct: 688 YACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 180/355 (50%), Gaps = 6/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS     + +  +      +DVV+W +MI   V++      L  F
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + G+  D+  L    SA   +  ++QG  +H     +G  AD S+ N  VN+YA+C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D ++WN ++SG   +   ++ L+ F +MG +G + +  +  SA+
Sbjct: 496 GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAI 555

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L ++  GK +H   +K G+  +    V N+LIS+Y +CG IE A+  F  M+ ++
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGH--TSETEVANALISLYGKCGSIEDAKMIFSEMSLRN 613

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II   + +G+  EA DL  +M+    ++P+  T + +++ C+   L+ EG S +
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMK-QEGLKPNDVTFIGVLAACSHVGLVEEGLS-Y 671

Query: 302 GYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             ++  + G + +  +   ++D   ++  L +A    + +    + + W +++S 
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 235/734 (32%), Positives = 372/734 (50%), Gaps = 46/734 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +  A T +  L Q   +H   I   +  D       +  Y++ GDL SS   F   H  D
Sbjct: 7   LFKASTTLRTLAQ---LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +  W  ++   + N   ++ +  + +M     QA++ +  S + A +  G+L  G+ +H 
Sbjct: 64  SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHG 123

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             IK G++  P V+   +L+S+Y + G +++A + F  M  +D+VSW++II     NG+ 
Sbjct: 124 RIIKSGFDMDPVVN--TALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEI 181

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            E  D    M +     PD   V+T++  C +  +LR  +S HGY ++R +  D  + +S
Sbjct: 182 NEGLDAFRCM-VSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS 240

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS---- 369
           L+  Y+K  SL  AE++F  +       +W +MIS     G  KE L L      +    
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVT-YRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEP 299

Query: 370 ---TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T+  IL SC +   L  GKS+HC  +K     N   ++ L    +      A   L 
Sbjct: 300 NSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDAN---LDCLGPTLLELYAATAKHDLC 356

Query: 427 QRISHN---SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           ++I H       + WN +I    Q G  +E +  F  M Q+Q   PDS +L + +SA GN
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRM-QKQGFMPDSFSLASSLSASGN 415

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
                 G  +HG  +K    +D  V N+LI MY +C  +  A  +F+      + TWN M
Sbjct: 416 EGELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSM 474

Query: 544 ISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS  SQN    +A+ LF  +     E  E++ VS++ AC+ LG L  GK IH  +   G 
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGV 534

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           ++  FI +AL+DMY+ C               +S  +WSS+IS+YG HG+  E I LF +
Sbjct: 535 RKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSK 594

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  SGI+P   +V+++LSACSH+G V EG+ ++N+M  ++ + P+ EH VCIVD+L R+G
Sbjct: 595 MLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAG 653

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            L EAYE IK +P  P   +WGA+L+ C  H    + K +   L+ ++ ++ G+Y  LSN
Sbjct: 654 DLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSN 713

Query: 766 MYVALGRWKDAVEI 779
           +Y A G W +  E+
Sbjct: 714 IYAAGGEWNEFGEV 727



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 240/501 (47%), Gaps = 18/501 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      +T+LL+ Y  + Y +S+  +F E   +D+V+W+++I++ VEN  +  GL  F
Sbjct: 129 GFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAF 188

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MV EG   DS  +L +V A  ++  L+  +  H   +K G+  D  + +  + MYAKC
Sbjct: 189 RCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKC 248

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L S+E  F  +    T +W  ++S      Y ++ L  F  M  +  + ++V++   +
Sbjct: 249 GSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIIL 308

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  GK +H + IK    D+    +  +L+ +Y+     +  E+    +  + 
Sbjct: 309 RSCTNLSLLREGKSVHCVVIKNDL-DANLDCLGPTLLELYAATAKHDLCEKILHEIGGRG 367

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +  WN +I  +A  G  +E  DL   MQ  +   PD  ++ + +S   +   L+ G  +H
Sbjct: 368 IAVWNTLISVYAQKGLLKETVDLFVRMQ-KQGFMPDSFSLASSLSASGNEGELQLGLQIH 426

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ I+R    D  + NSL++ YSK   +  A ++F+ + P   +V+WNSMISG       
Sbjct: 427 GHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEP-KGVVTWNSMISGLSQNGYS 484

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  M   C +      ++++ +C+    LE GK IH   +  G         AL
Sbjct: 485 TKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETAL 544

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CGDL  A  +   +S  S  S W+ +I +   +G   E I  F  M  +    P
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSERSVVS-WSSLISSYGVHGQISEVIFLFSKML-ESGIKP 602

Query: 470 DSVTLVNVISACGNLELAFEG 490
           + VT++NV+SAC +     EG
Sbjct: 603 NDVTVMNVLSACSHAGCVKEG 623


>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
 gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
          Length = 930

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 240/763 (31%), Positives = 377/763 (49%), Gaps = 83/763 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR +H L++K G    + +    ++MY + G L  +   F  M C+D V  N +++    
Sbjct: 113 GRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSR 172

Query: 152 NNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASAC--LGELSYGKVIHALGIKLGYEDS 208
                     FR M  SG +++   +++ AV    C  L  L  G+ IH   IK G E  
Sbjct: 173 AGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFD 232

Query: 209 PYVSVTNSLISMYSQCGD---IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
                 N+L+SMY++CG    ++ A  AF  + CKDVVSWN+II G++ NG FEEA  L 
Sbjct: 233 TLSG--NALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALF 290

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            +M +     P+ +T+  ++  C+     R  G+ +HG+ +R  L  D+ + N+LM  YS
Sbjct: 291 GQM-ISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K   +   E +F + + M D+V+WN++I+G            LF+ +L+        +L+
Sbjct: 350 KVCEMRAVESIFRS-SKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLI 408

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           ++L +C    +L  G  +H +  +       T  +NAL+  Y  C    AAF     I  
Sbjct: 409 SLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITI-Q 467

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI---SACGNLELAF 488
           N D+  WN ++ AC  + H  E                DSVT++N+I   + CG +++  
Sbjct: 468 NKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCG-IKMVQ 526

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES--------------CY- 533
           E    HG +L+     D+ V NA++  Y +C  +  A T+F S              CY 
Sbjct: 527 ES---HGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYL 583

Query: 534 --NC--------------NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
             NC              +L TWN M   ++QN    +A  LF  L+ E   P+ ISI +
Sbjct: 584 KNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITN 643

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           ILSAC  L  ++  KQ HG++      E+  +  ALLD YS C               K 
Sbjct: 644 ILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKD 702

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              +++MI AY  HG   +A+ELF +M    I+P    + +LLSACSH+GLVD G++ + 
Sbjct: 703 LVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFK 762

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGD 738
           ++ E Y V P  EH  C+VD+L RSG+LQ+AY F  ++P        WG++L AC  HG+
Sbjct: 763 SIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGE 822

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            K+G+  A+ LF +E E++G Y+ +SN++ A  +W+    + K
Sbjct: 823 VKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDKWESVEHVRK 865



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 181/709 (25%), Positives = 325/709 (45%), Gaps = 85/709 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+      + +++  Y  +     +  +F E    D V  N +ITA           H F
Sbjct: 124 GYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLF 183

Query: 62  GEMVEEGIRFD---STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             M+  G+      + T+ +++    ++  L+ GR +H   IK G+  D+   N  V+MY
Sbjct: 184 RAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMY 243

Query: 119 AKCGD---LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           AKCG    ++ +   FS + C D VSWN+I++G   N   E+ L  F +M  S E   N 
Sbjct: 244 AKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQM-ISEECLPNY 302

Query: 176 SLSSAVAASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           S  + V     L E    YGK IH   ++ G E    +SV+N+L++ YS+  ++ A E  
Sbjct: 303 STLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMD--ISVSNALMAHYSKVCEMRAVESI 360

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F      D+V+WN +I G+ +N     A  L   + L   + PD  ++++L++ CA    
Sbjct: 361 FRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGL-LFAGMAPDSVSLISLLTACAQVGN 419

Query: 294 LREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           LR G  VHGY  R   L  +  +MN+L+ FYS+ +    A   F  I    D VSWN+++
Sbjct: 420 LRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQN-KDSVSWNAIL 478

Query: 353 SG-------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           S              L  EM +  +Q+   T+L I+   ++   ++  +  H + L++G+
Sbjct: 479 SACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNII-RMSTFCGIKMVQESHGYSLRVGY 537

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-------------------------- 433
           + ++   NA++  Y  CG L  A +L + ++  +                          
Sbjct: 538 TGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNH 597

Query: 434 ----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               D + WN++     QN    +A   F  + Q +  +PD++++ N++SAC +L     
Sbjct: 598 MAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQL-QSEGLNPDTISITNILSACIHLSSVQL 656

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            K  HG  L++ +  D  ++ AL+  Y +C +I +A  +F+   + +L  +  MI A++ 
Sbjct: 657 VKQCHGYMLRASLE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAM 715

Query: 550 NKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-------- 598
           +    +A+ELF     L+ +P+ + + ++LSAC+  G++  G +I   +  +        
Sbjct: 716 HGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEE 775

Query: 599 ------------GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
                       G  ++++  S  LDM  +  +  AW S++ A   HG+
Sbjct: 776 HCACMVDLLARSGRLQDAY--SFALDMPPHVVNANAWGSLLGACKVHGE 822



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 186/686 (27%), Positives = 318/686 (46%), Gaps = 106/686 (15%)

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASA----CLGELSYGKVIHALGIKLGYEDSPYVSV 213
           C    R M   G + + ++L++AV +S+    C G  + G+ +H L +K+GY D   V+ 
Sbjct: 74  CTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVA- 132

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +++ MY + G +  A   F  M+C D V  N +I   +  G + + F L   M L   
Sbjct: 133 -KAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAM-LASG 190

Query: 274 VE---PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK---SN 327
           V+   P   TV  ++ +CA   +LR GRS+HGY I+  L +D L  N+L+  Y+K   S 
Sbjct: 191 VDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSI 250

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF-------SFSTLLAIL 375
           ++  A L F+ I    D+VSWNS+I+     GLF+E L L  Q        ++STL  +L
Sbjct: 251 AMDDAHLAFSTIC-CKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVL 309

Query: 376 PSCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           P C+  E    +GK IH + ++ G   +    NALM  Y    ++ A  S+  R S   D
Sbjct: 310 PFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIF-RSSKMGD 368

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGK 491
              WN VI     N +   A+K F+ +     A PDSV+L+++++AC   GNL +   G 
Sbjct: 369 IVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMA-PDSVSLISLLTACAQVGNLRV---GI 424

Query: 492 SLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
            +HG   +    L +T + NAL++ Y +C    +A   F +  N +  +WN ++SA + +
Sbjct: 425 RVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANS 484

Query: 551 KAEVRALELFR------HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +  +   + FR      H   + + ++I++I+   T  G+ +  ++ HG+   +G+  +S
Sbjct: 485 EHHIE--QFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGI-KMVQESHGYSLRVGYTGDS 541

Query: 605 FISSALLDMYSNC----------------------------------------------K 618
            +++A+LD Y+ C                                              K
Sbjct: 542 SVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEK 601

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
               W+ M   Y  +    +A  LFH++ + G+ P   S+ ++LSAC H   V    Q +
Sbjct: 602 DLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCH 661

Query: 679 NNMLEE--YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
             ML     D+  E      ++D   + G +  AY   + + +     ++ AM+ A + H
Sbjct: 662 GYMLRASLEDIHLEG----ALLDAYSKCGNIANAYNLFQ-VSLHKDLVIFTAMIGAYAMH 716

Query: 737 GDTKMGKQVAELLFKL-----EPENV 757
           G   M ++  EL  K+     +P++V
Sbjct: 717 G---MAEKAVELFSKMLTLDIKPDHV 739



 Score = 42.7 bits (99), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  +    +LL AYS      ++  LF  + +KD+V + AMI A   +      +  
Sbjct: 666 RASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVEL 725

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+   I+ D   L  ++SA +    +  G ++   +    G+      C   V++ A
Sbjct: 726 FSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLA 785

Query: 120 KCGDLNSSECTFSGM--HCADTVSWNTIMSGC 149
           + G L  +      M  H  +  +W +++  C
Sbjct: 786 RSGRLQDAYSFALDMPPHVVNANAWGSLLGAC 817


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 210/719 (29%), Positives = 372/719 (51%), Gaps = 63/719 (8%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+++H   +++ +  D+ L N  +  YAKC  +++S   F  M   D  +WN I+     
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC--LGELSYGKVIHALGIKLGYEDSP 209
            +  E   + F EM      + N  +S+     AC  L ++  G+  H + IK+G +++ 
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNI 143

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           YV   N+L+ MY++C  I  A +AF  +   + VS+ A++ G A + +  EAF L   M 
Sbjct: 144 YVG--NALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLM- 200

Query: 270 LMRSVEPDIATVVTLISLCA------------DSLLLRE--GRSVHGYAIRRLLGYDLLM 315
           L   +  D  ++ +++ +C+            + +L  +  G+ VH   I+     DL +
Sbjct: 201 LRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHL 260

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAIL 375
            NSL+D Y+K+ ++  AE++F  + P   +VSWN MI+G  ++                 
Sbjct: 261 NNSLLDMYAKNGNMDSAEMIFVNM-PEVSVVSWNVMIAGYGQK----------------- 302

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
               S +++E+ + +       GF  + I    ++   I  GD+ A   +   +S  S  
Sbjct: 303 --SQSSKAIEYLQRMQYH----GFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPS-L 355

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S WN ++   +QN + +EA+K F+ M Q ++  PD  TL  ++S+   + L   G+ +H 
Sbjct: 356 SSWNTILSGYSQNENHKEAVKLFREM-QFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHA 414

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           ++ K++   D  + + LI MY +C  ++ A  +F+     ++  WN M++  S N  +  
Sbjct: 415 VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKE 474

Query: 556 ALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A   F+ +  +   P++ S  ++LS C +L  L  G+Q+H  +   G+  ++F+ SAL+D
Sbjct: 475 AFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALID 534

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               K+   W+ MI  Y  +G G EA+ L+ +M  SG +P   +
Sbjct: 535 MYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGIT 594

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +++L+ACSHSGLVD G++ +N+M +E+ V P  +H+ CI+D LGR+G+L EA   I  +
Sbjct: 595 FVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKM 654

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           P +  P +W  +LS+C  + D  + ++ AE LF L+P+N   Y+ L+N+Y +LGRW DA
Sbjct: 655 PCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDA 713



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 186/694 (26%), Positives = 303/694 (43%), Gaps = 104/694 (14%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S  L+  Y+  +  ++S  LF +   +D+ TWNA++ A  +   +      F EM E  I
Sbjct: 43  SNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI 102

Query: 70  RFDSTTLLIIVSALTQMNC------LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
                +   ++SALT+         ++ GR  H +SIK G+  +  + N  + MYAKC  
Sbjct: 103 ----VSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 158

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS--AV 181
           +  +   F  +   + VS+  +M G   ++   +    FR M  +    D+VSLSS   V
Sbjct: 159 IGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 218

Query: 182 AASACLGELS------------YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            +    GE              +G+ +H L IK G+E    + + NSL+ MY++ G++++
Sbjct: 219 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESD--LHLNNSLLDMYAKNGNMDS 276

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           AE  F  M    VVSWN +I G+    +  +A + L  MQ     EPD  T V ++  C 
Sbjct: 277 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQY-HGFEPDEITYVNMLVACI 335

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            S  +  GR                                    +F+ ++  + L SWN
Sbjct: 336 KSGDIEAGRQ-----------------------------------MFDGMSSPS-LSSWN 359

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +++SG            LF+EM +       +TL  IL S      LE G+ +H    K 
Sbjct: 360 TILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKA 419

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            F  +    + L+ MY  CG +  A  +  RI+   D  CWN ++   + N   +EA   
Sbjct: 420 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNSLDKEAFTF 478

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           FK M +++   P   +   V+S C  L    +G+ +H    +     D  V +ALI MY 
Sbjct: 479 FKKM-REKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYS 537

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVS 574
           +C D+ +A  VF+     N  TWN MI  ++QN     A+ L+  +     +P+ I+ V+
Sbjct: 538 KCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVA 597

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L+AC+  G++  G +I    F+   QE+      L+D Y         + +I + G  G
Sbjct: 598 VLTACSHSGLVDTGIKI----FNSMQQEHGV--EPLVDHY---------TCIIDSLGRAG 642

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVI---SLLSAC 665
           +  EA  L  +M      P K   I    LLS+C
Sbjct: 643 RLHEAEVLIDKM------PCKYDPIIWEVLLSSC 670



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 232/518 (44%), Gaps = 73/518 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++    +LL  Y+       ++  F +    + V++ AM+    ++  V      F
Sbjct: 138 GLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLF 197

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLK--------------QGRVVHCLSIKAGMIAD 107
             M+   I  DS +L  ++   ++  C +               G+ VHCL+IK G  +D
Sbjct: 198 RLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESD 257

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
             L N  ++MYAK G+++S+E  F  M     VSWN +++G    +   K + Y + M +
Sbjct: 258 LHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQY 317

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
            G + D ++  + + A    G++  G+                                 
Sbjct: 318 HGFEPDEITYVNMLVACIKSGDIEAGR--------------------------------- 344

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
               + F GM+   + SWN I+ G++ N   +EA  L  EMQ  RSV PD  T+  ++S 
Sbjct: 345 ----QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQF-RSVHPDRTTLAIILSS 399

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            A  +LL  GR VH  + + +   D+ + + L+  YSK   +  A+ +F+ IA + D+V 
Sbjct: 400 LAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAEL-DIVC 458

Query: 348 WNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           WNSM++GL            FK+M       SQFS++T   +L  C    SL  G+ +H 
Sbjct: 459 WNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYAT---VLSCCAKLSSLSQGRQVHS 515

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              + G+ N+    +AL+ MY  CGD+ AA  +   +    +T  WN +I    QNG   
Sbjct: 516 QIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMML-GKNTVTWNEMIHGYAQNGCGD 574

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           EA+  ++ M       PD +T V V++AC +  L   G
Sbjct: 575 EAVLLYEDMI-GSGEKPDGITFVAVLTACSHSGLVDTG 611



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 181/354 (51%), Gaps = 6/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF     T  ++L A       E+   +F    +  + +WN +++   +N      +  F
Sbjct: 319 GFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLF 378

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +  D TTL II+S+L  M  L+ GR VH +S KA    D  L +  + MY+KC
Sbjct: 379 REMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKC 438

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  F  +   D V WN++M+G   N+  ++   +F++M   G      S ++ +
Sbjct: 439 GKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVL 498

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A L  LS G+ +H+   + GY +  +V   ++LI MYS+CGD++AA   F  M  K+
Sbjct: 499 SCCAKLSSLSQGRQVHSQIAREGYMNDAFVG--SALIDMYSKCGDVDAARWVFDMMLGKN 556

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN +I G+A NG  +EA  LL+E  +    +PD  T V +++ C+ S L+  G  + 
Sbjct: 557 TVTWNEMIHGYAQNGCGDEAV-LLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIF 615

Query: 302 GYAIRRLLGYDLLM--MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
             ++++  G + L+     ++D   ++  L +AE+L + +    D + W  ++S
Sbjct: 616 N-SMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 668



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 232/499 (46%), Gaps = 70/499 (14%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +E     + +L+  C D      G+ +H + +R  L  D  + N L++FY+K N++  + 
Sbjct: 1   METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP---SC 378
            LF+ + P  D+ +WN+++              LF EM    +  S++TL++ L    +C
Sbjct: 61  RLFDQM-PKRDIYTWNAILGAYCKASELEDAHVLFAEMPER-NIVSWNTLISALTRNGAC 118

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDT 435
            +   +E G+  H   +K+G  NN    NAL+ MY  C   GD + AF  +   +  S T
Sbjct: 119 GALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFT 178

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN------------ 483
           +    ++     +    EA + F+ M + +    DSV+L +V+  C              
Sbjct: 179 A----MMGGLADSDQVNEAFRLFRLMLRNR-IHVDSVSLSSVLGVCSRGGCGEFGLHDSN 233

Query: 484 --LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             L     G+ +H L +K     D  + N+L+ MY +  ++ SA  +F +    ++ +WN
Sbjct: 234 DVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWN 293

Query: 542 CMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MI+ + Q     +A+E  + ++   FEP+EI+ V++L AC + G +  G+Q        
Sbjct: 294 VMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ-------- 345

Query: 599 GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
                      + D  S+  S ++W++++S Y  +    EA++LF EM    + P ++++
Sbjct: 346 -----------MFDGMSS-PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTL 393

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFIK 715
             +LS+ +   L++ G Q +  + ++   R +      ++ M  + GK++ A   ++ I 
Sbjct: 394 AIILSSLAGMMLLEGGRQVH-AVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIA 452

Query: 716 NLPIQPKPGVWGAMLSACS 734
            L I      W +M++  S
Sbjct: 453 ELDIV----CWNSMMAGLS 467



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 51/348 (14%)

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L +++  C + +    GK +H   L+S +  DT + N LI  Y +C  I ++  +F+   
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV------LRH 587
             ++ TWN ++ A+ +      A  LF  +  E N +S  +++SA T+ G       +  
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMP-ERNIVSWNTLISALTRNGACGALVDVEC 126

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGY 632
           G++ HG    +G   N ++ +ALL MY+ C+               +  ++++M+     
Sbjct: 127 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
             +  EA  LF  M  + I     S+ S+L  CS  G  + GL   N++L   DV  +  
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSS-DVHGQQV 245

Query: 693 HHVCI--------------VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           H + I              +DM  ++G +  A     N+P +     W  M++    +G 
Sbjct: 246 HCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG---YGQ 301

Query: 739 TKMGKQVAELLFKL-----EPENVGYYISLSNMYVALGRWKDAVEIGK 781
                +  E L ++     EP+ + Y     NM VA  +  D +E G+
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYV----NMLVACIKSGD-IEAGR 344


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/614 (32%), Positives = 334/614 (54%), Gaps = 41/614 (6%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            K +HAL +  G   S ++S+   L+++Y+  GD+  +   F  +  KDV +WN++I  +
Sbjct: 92  AKRLHALLVVSGKIQSNFISI--RLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAY 149

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             NG F EA D  +++ L+   + D  T   ++  C     L +GR +H +  +    +D
Sbjct: 150 VRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TLVDGRKIHCWVFKLGFQWD 206

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK------------EML 360
           + +  SL+  YS+   +  A  LF+ + P  D+ SWN+MISGL +            EM 
Sbjct: 207 VFVAASLIHMYSRFGFVGIARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T+ +ILP C     +     IH + +K G        NAL++MY   G+L 
Sbjct: 266 LEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + Q++    D   WN +I A  QN     A   F  M Q     PD +TLV++ S 
Sbjct: 326 DAQKVFQQM-FLRDVVSWNSIIAAYEQNDDPVTARGFFFKM-QLNGLEPDLLTLVSLASI 383

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRV-QNALITMYGRCRDIKSASTVFESCYNCNLCT 539
                     +S+HG  ++    ++  V  NA++ MY +   I SA  VF      ++ +
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS 443

Query: 540 WNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           WN +IS ++QN     A+E++R +E     + N+ + VSIL+A   +G L+ G +IHGH+
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
                  + F+ + L+D+Y  C               +S+  W+++IS +G HG G +A+
Sbjct: 504 IKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKAL 563

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF EM + G++P   + ISLLSACSHSGLVDEG +++ ++++EY ++P  +H+ C+VD+
Sbjct: 564 KLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKHYGCMVDL 622

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G L+ AY+FIK++P+ P   +WGA+L AC  HG+ ++GK  ++ LF+++ ENVGYY
Sbjct: 623 LGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYY 682

Query: 761 ISLSNMYVALGRWK 774
           + LSN+Y  +G+W+
Sbjct: 683 VLLSNIYANVGKWE 696



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/497 (31%), Positives = 250/497 (50%), Gaps = 24/497 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH-FFGEMVEEG 68
           S  L+  Y+++     S   F +   KDV TWN+MI+A V N      +  F+  ++   
Sbjct: 111 SIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTK 170

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            + D  T   ++ A      L  GR +HC   K G   D  +    ++MY++ G +  + 
Sbjct: 171 FQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIAR 227

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D  SWN ++SG + N    + L    EM   G   D+V+++S +   A LG
Sbjct: 228 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG 287

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++S   +IH   IK G E   +VS  N+LI+MY++ G++  A++ F  M  +DVVSWN+I
Sbjct: 288 DISTATLIHLYVIKHGLEFELFVS--NALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSI 345

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           I  +  N     A     +MQL   +EPD+ T+V+L S+ A S   +  RSVHG+ +RR 
Sbjct: 346 IAAYEQNDDPVTARGFFFKMQL-NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRG 404

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------- 357
            L   +++ N++MD Y+K   +  A  +FN I P+ D+VSWN++ISG  +          
Sbjct: 405 WLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI-PVKDVVSWNTLISGYTQNGLASEAIEV 463

Query: 358 -EMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             M+  C +   +  T ++IL +     +L+ G  IH   +K     +      L+ +Y 
Sbjct: 464 YRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYG 523

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG LV A  L  ++   S    WN +I     +GH ++A+K F+ M Q +   PD VT 
Sbjct: 524 KCGRLVDAMCLFYQVPRESSVP-WNAIISCHGIHGHGEKALKLFREM-QDEGVKPDHVTF 581

Query: 475 VNVISACGNLELAFEGK 491
           ++++SAC +  L  EGK
Sbjct: 582 ISLLSACSHSGLVDEGK 598



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 167/612 (27%), Positives = 295/612 (48%), Gaps = 45/612 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L + +G I  + +    VN+YA  GD++ S  TF  +   D  +WN+++S  + 
Sbjct: 92  AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 152 N-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
           N ++ E    +++ +  +  QAD  +    + A   L +   G+ IH    KLG++   +
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVF 208

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+   SLI MYS+ G +  A   F  M  +D+ SWNA+I G   NG   +A D+L EM+L
Sbjct: 209 VAA--SLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 266

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              +  D  TV +++ +CA    +     +H Y I+  L ++L + N+L++ Y+K  +L 
Sbjct: 267 -EGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLG 325

Query: 331 KAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSC 378
            A+ +F  +  + D+VSWNS+I+            G F +M     +    TL+++    
Sbjct: 326 DAQKVFQQMF-LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIA 384

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                 +  +S+H + ++ G+    + + NA+M MY   G + +A  +   I    D   
Sbjct: 385 AQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIP-VKDVVS 443

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I   TQNG   EAI+ ++ M + +    +  T V++++A  ++    +G  +HG  
Sbjct: 444 WNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL 503

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K+ + LD  V   LI +YG+C  +  A  +F      +   WN +IS    +    +AL
Sbjct: 504 IKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKAL 563

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LFR ++ E   P+ ++ +S+LSAC+  G++  GK      FHL  QE           Y
Sbjct: 564 KLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF----FHL-MQE-----------Y 607

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               S   +  M+   G  G    A +   +M    + P  S   +LL AC   G ++ G
Sbjct: 608 GIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP---LHPDASIWGALLGACRIHGNIELG 664

Query: 675 LQYYNNMLEEYD 686
            ++ ++ L E D
Sbjct: 665 -KFASDRLFEVD 675



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 224/463 (48%), Gaps = 14/463 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL+  YS   +   + +LF +   +D+ +WNAMI+  ++N      L   
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI  DS T+  I+    Q+  +    ++H   IK G+  +  + N  +NMYAK 
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  ++  F  M   D VSWN+I++    N+ P     +F +M  +G + D ++L S  
Sbjct: 322 GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLA 381

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           + +A   +    + +H   ++ G+     V + N+++ MY++ G I++A + F  +  KD
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRGWLMEAVV-IGNAVMDMYAKLGVIDSAHKVFNLIPVKD 440

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G+  NG   EA ++   M+  R ++ +  T V++++  A    L++G  +H
Sbjct: 441 VVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIH 500

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
           G+ I+  L  D+ +   L+D Y K   L  A  LF  + P    V WN++IS        
Sbjct: 501 GHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQV-PRESSVPWNAIISCHGIHGHG 559

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM     +    T +++L +C+    ++ GK       + G   +      +
Sbjct: 560 EKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCM 619

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           + +    G L  A+  ++ +  + D S W  ++ AC  +G+ +
Sbjct: 620 VDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 218/713 (30%), Positives = 359/713 (50%), Gaps = 39/713 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  +  AG + D  L N+ +  Y+  G L  +   F  M   + VSW +++S    +  
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 155 PEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
            +  + L+      S E  +   L+S + A      +S G+ +H + +KL  + + YV  
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG- 158

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +LI++Y++ G ++ A   F  +  +  V+WN +I G+A  G    A +L   M +   
Sbjct: 159 -TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGI-EG 216

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V PD   + + +S C+    L  GR +HGYA R     D  ++N L+D Y K + LS A 
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            LF+ +   N LVSW +MISG            +F  M     Q       +IL SC S 
Sbjct: 277 KLFDCMEYRN-LVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSL 335

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            ++  G+ IH   +K     +    NAL+ MY  C  L  A ++   ++ + D   +N +
Sbjct: 336 AAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAED-DAISYNAM 394

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKS 500
           I   ++N    EA+  F+ M +  +  P  +T V+++    + +LA E  K +HGL +KS
Sbjct: 395 IEGYSKNRDLAEAVNIFQRM-RFFSLRPSLLTFVSLLGVSSS-QLAIELSKQIHGLIIKS 452

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
              LD    +ALI +Y +C  +  A TVF   +  ++  WN MI   +QN+    A++LF
Sbjct: 453 GTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLF 512

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             L      PNE + V++++  + L  + HG+Q H  +   G   +  +S+AL+DMY+ C
Sbjct: 513 NQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKC 572

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +    W+SMI+ Y  HG   EA+++F  M  + + P   + + +L
Sbjct: 573 GFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVL 632

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC+H+G V EGL ++N+M   YD+ P  EH+  +V++ GRSGKL  A EFI+ +PI+P 
Sbjct: 633 SACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPA 692

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
             VW ++LSAC   G+ ++G+  AE+    +P + G Y+ LSN+Y + G W D
Sbjct: 693 AAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWAD 745



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 192/690 (27%), Positives = 321/690 (46%), Gaps = 60/690 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L  +  LL  YSN+     +  LF    ++++V+W ++I+   ++      +  F
Sbjct: 48  GRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLF 107

Query: 62  GEMVEEGIRFDSTTLLI-IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
               +      +  LL  ++ A TQ   +  G  VH +++K  + A+  +    +N+YAK
Sbjct: 108 VAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAK 167

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  +     V+WNT+++G          L  F  MG  G + D   L+SA
Sbjct: 168 LGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASA 227

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V+A + LG L  G+ IH    +   E     SV N LI +Y +C  + AA + F  M  +
Sbjct: 228 VSACSALGFLEGGRQIHGYAYRSATETD--TSVINVLIDLYCKCSRLSAARKLFDCMEYR 285

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VSW  +I G+  N    EA  +   M      +PD     ++++ C     + +GR +
Sbjct: 286 NLVSWTTMISGYMQNSFNAEAITMFWNMT-QAGWQPDGFACTSILNSCGSLAAIWQGRQI 344

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H + I+  L  D  + N+L+D Y+K   L++A  +F+A+A  +D +S+N+MI G      
Sbjct: 345 HAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAE-DDAISYNAMIEGYSKNRD 403

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F+ M +   + S  T +++L   +S  ++E  K IH   +K G S +    +A
Sbjct: 404 LAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASA 463

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L+ +Y  C    D    F++L    H  D   WN +I    QN   +EAIK F  +    
Sbjct: 464 LIDVYSKCSLVNDAKTVFNML----HYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG 519

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
            A P+  T V +++    L   F G+  H   +K+ +  D  V NALI MY +C  IK  
Sbjct: 520 MA-PNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG 578

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQL 582
             +FES    ++  WN MI+ ++Q+     AL++FR +   E EPN ++ V +LSAC   
Sbjct: 579 RMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHA 638

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN-------AAWSSMISAYGYHGK 635
           G +  G                      L+ +++ KSN         ++S+++ +G  GK
Sbjct: 639 GFVGEG----------------------LNHFNSMKSNYDIEPGIEHYASVVNLFGRSGK 676

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
              A E    M    I+P  +   SLLSAC
Sbjct: 677 LHAAKEFIERM---PIKPAAAVWRSLLSAC 703



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 179/405 (44%), Gaps = 24/405 (5%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
            LL+ LP+           +IH      G  ++    N L+  Y N G L  A  L  R+
Sbjct: 21  VLLSCLPT-GGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRM 79

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
            H +  S W  VI   TQ+G    AI  F +  +     P+   L +V+ AC   +    
Sbjct: 80  PHRNLVS-WGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSL 138

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ +HG+A+K  +  +  V  ALI +Y +   +  A  VF +       TWN +I+ ++Q
Sbjct: 139 GEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQ 198

Query: 550 NKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
                 ALELF  +  E   P+   + S +SAC+ LG L  G+QIHG+ +    + ++ +
Sbjct: 199 IGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSV 258

Query: 607 SSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L+D+Y  C   +A               W++MIS Y  +    EAI +F  M  +G 
Sbjct: 259 INVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGW 318

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P   +  S+L++C     + +G Q + ++++  D+  +      ++DM  +   L EA 
Sbjct: 319 QPDGFACTSILNSCGSLAAIWQGRQIHAHVIKA-DLEADEYVKNALIDMYAKCEHLTEAR 377

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL--FKLEP 754
                L  +     + AM+   S + D      + + +  F L P
Sbjct: 378 AVFDALA-EDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 191/594 (32%), Positives = 326/594 (54%), Gaps = 34/594 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S++ + G ++ A R F  +  K  V +  ++ GFA     ++A      M+    VE
Sbjct: 74  KLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMR-DDEVE 132

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ +C D   LR G+ +HG  ++     DL  M  L + Y+K   + +A  +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192

Query: 336 FNAIAPMNDLVSWNSMISGLFK--------EMLYL-CSQ---FSFSTLLAILPSCNSPES 383
           F+ + P  DLVSWN++++G  +        EM+ L C +    SF T++++LP+ ++   
Sbjct: 193 FDRM-PERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRL 251

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           +  GK IH + ++ GF +      AL+ MY  CG L  A  L   +   +  S WN +I 
Sbjct: 252 IRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVS-WNSMID 310

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A  QN + +EA+  F+ M  +    P  V+++  + AC +L     G+ +H L+++  + 
Sbjct: 311 AYVQNENPKEAMVIFQKMLDE-GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELD 369

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V N+LI+MY +C+++ +A+++F    +  + +WN MI  F+QN   + AL  F  +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQM 429

Query: 564 E---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           +    +P+  + VS+++A  +L +  H K IHG V      +N F+++AL+DMY+ C   
Sbjct: 430 QARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAI 489

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG HG G  A+ELF EM    IRP   + +S++SAC
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISAC 549

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGLV+ GL+ ++ M E Y + P  +H+  +VD+LGR+G+L EA++FI  +P++P   V
Sbjct: 550 SHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +GAML AC  H +    ++VAE LF+L PE+ GY++ L+N+Y A   W+   ++
Sbjct: 610 YGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQV 663



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 242/469 (51%), Gaps = 19/469 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   T L   Y+       +  +F     +D+V+WN ++    +N    M L   
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EE ++    T++ ++ A++ +  ++ G+ +H  +++AG  +  ++    V+MYAKC
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKC 284

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F GM   + VSWN+++   + N  P++ ++ F++M   G +  +VS+  A+
Sbjct: 285 GSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG+L  G+ IH L ++L  + +  VSV NSLISMY +C +++ A   F  +  + 
Sbjct: 345 HACADLGDLERGRFIHKLSVELELDRN--VSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA+I GFA NG+  EA +   +MQ  R+V+PD  T V++I+  A+  +    + +H
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQ-ARTVKPDTFTYVSVITAIAELSITHHAKWIH 461

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  +R  L  ++ +  +L+D Y+K  ++  A L+F+ ++  + + +WN+MI G       
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHGIG 520

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF+EM     + +  T L+++ +C+    +E G K  H  +       +     A
Sbjct: 521 KAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGA 580

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
           ++ +    G L  A+  + ++      + +  ++ AC   +N +F E +
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKV 629



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 227/496 (45%), Gaps = 24/496 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE--- 66
            T L++ +      + +  +F     K  V +  M+    +   +   L FF  M +   
Sbjct: 72  QTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEV 131

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           E + ++ T LL +     +   L+ G+ +H L +K+G   D        NMYAKC  ++ 
Sbjct: 132 EPVVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHE 188

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D VSWNTI++G   N      L     M     +   +++ S + A + 
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSA 248

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  +  GK IH   ++ G++    V++  +L+ MY++CG ++ A   F GM  ++VVSWN
Sbjct: 249 LRLIRIGKEIHGYAMRAGFDS--LVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWN 306

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++ID +  N   +EA  +  +M L   V+P   +V+  +  CAD   L  GR +H  ++ 
Sbjct: 307 SMIDAYVQNENPKEAMVIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLY 361
             L  ++ ++NSL+  Y K   +  A  +F  +     +VSWN+MI G  +     E L 
Sbjct: 366 LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-RTIVSWNAMILGFAQNGRPIEALN 424

Query: 362 LCSQFSFSTL-------LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             SQ    T+       ++++ +          K IH   ++     N     AL+ MY 
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG ++ A  +   +S    T+ WN +I     +G  + A++ F+ M Q+    P+ VT 
Sbjct: 485 KCGAIMIARLIFDMMSERHVTT-WNAMIDGYGTHGIGKAALELFEEM-QKGTIRPNGVTF 542

Query: 475 VNVISACGNLELAFEG 490
           ++VISAC +  L   G
Sbjct: 543 LSVISACSHSGLVEAG 558


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 217/682 (31%), Positives = 351/682 (51%), Gaps = 48/682 (7%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCL---LYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
           D    N ++  C  + + E  +   L F E G+  E+         + A   L +++ GK
Sbjct: 2   DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFR--FFPCLIKAFGGLYDVNKGK 59

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
            IH   +K G+    +V   NSL+ MY +CG    A   F  M  +D VSWN +I GF  
Sbjct: 60  QIHGHLLKFGFLQDIFVK--NSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117

Query: 255 NGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           +G + ++  +   M  +   S    +A +  L S CA    L  G  +HG+ +++ +  D
Sbjct: 118 SGDYVKSLVMFRRMVKECGGSYHNRVACLAALSS-CASIKCLTHGLEIHGFLVKKGVDSD 176

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS-----WNSMISG------------L 355
             ++++L++ Y K   +  AE +F  I   N+LV      WN MI G            L
Sbjct: 177 EFLVSALIEMYMKCGDIKNAENVFERIRD-NELVGRNMAVWNVMILGYVSNECLSLALEL 235

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F EML L      ST++ +L  C+    L  GK IH   L LG  ++     ALM MY  
Sbjct: 236 FVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFK 295

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGD   +  + +R S N +   W  V++ C QNG+  EA++ F S        PD V L+
Sbjct: 296 CGDPETSLQIFKR-SQNHNLVMWGSVMLNCAQNGYPNEALEFF-SEFMLDCGFPDPVILL 353

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
             + AC  L L   G ++HG A+K     D  V  AL+  YG+C D++ A  VF      
Sbjct: 354 AALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTR 413

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN +IS F+QNK    AL+ FR ++    +PN +++  ILS CT L V+   K++H
Sbjct: 414 DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVH 473

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
            ++    F+ N+ ++++L+  Y+ C               ++   W+S++  +G HG+  
Sbjct: 474 CYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTD 533

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           E    F +M  + I+P   +  SLLS+CSHSG VD G +Y+N+M+E+Y++ P  E + C+
Sbjct: 534 EMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCM 593

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G L +AY+ I ++P  P   +WG++L++C +HG+TK+ + VA  +F+L+  +V
Sbjct: 594 VDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSV 653

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
           GY + L+N+Y   G   +   +
Sbjct: 654 GYRVLLANLYEDSGNLNEVFRV 675



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 191/717 (26%), Positives = 326/717 (45%), Gaps = 58/717 (8%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVV 95
           DV   N MI  C E+      +  + + +E G   +       ++ A   +  + +G+ +
Sbjct: 2   DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +K G + D  + N  + MY KCG   ++   F  M   D+VSWNT++SG   +   
Sbjct: 62  HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDY 121

Query: 156 EKCLLYFREM--GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
            K L+ FR M     G   + V+  +A+++ A +  L++G  IH   +K G +   +  +
Sbjct: 122 VKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEF--L 179

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVS-----WNAIIDGFALNGKFEEAFDLLHEM 268
            ++LI MY +CGDI+ AE  F  +   ++V      WN +I G+  N     A +L  EM
Sbjct: 180 VSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEM 239

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   + PD +TVV ++ LC+  L L  G+ +HG  +   L  D+ +  +LM+ Y K   
Sbjct: 240 -LELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGD 298

Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAILP 376
              +  +F   +  ++LV W S++     +G   E L   S+F           LLA L 
Sbjct: 299 PETSLQIFKR-SQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALR 357

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C+       G +IH + +K+GF ++     AL+  Y  CGD+  A  +   +S   D  
Sbjct: 358 ACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLS-TRDLV 416

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I    QN    EA+K F+ M Q +   P++VT+  ++S C +L +    K +H  
Sbjct: 417 SWNALISGFAQNKCADEALKAFRDM-QSKQIKPNTVTMACILSVCTHLSVMILCKEVHCY 475

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            L+     +  V N+LI+ Y +C DI S+ TVFE     N  TWN ++  F  +    R 
Sbjct: 476 LLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHG---RT 532

Query: 557 LELFRHLE------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            E+F   E       +P+  +  S+LS+C+  G +  G +                 +++
Sbjct: 533 DEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYF---------------NSM 577

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
           ++ Y+       ++ M+   G  G   +A +L   M  S   P      SLL++C + G 
Sbjct: 578 MEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCS---PDDRIWGSLLASCKNHGN 634

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPG 724
                +   N + E D      + V + ++   SG L E +     IK + ++ +PG
Sbjct: 635 TKLA-EVVANHIFELDA-SSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPG 689



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/620 (25%), Positives = 277/620 (44%), Gaps = 63/620 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +    SLL  Y       +++ +F     +D V+WN MI+   ++   V  L  F
Sbjct: 69  GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMF 128

Query: 62  GEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             MV+E  G   +    L  +S+   + CL  G  +H   +K G+ +D  L +  + MY 
Sbjct: 129 RRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYM 188

Query: 120 KCGDLNSSECTFSGMHCADTVS-----WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           KCGD+ ++E  F  +   + V      WN ++ G + N      L  F EM   G   D+
Sbjct: 189 KCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDS 248

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            ++   +   + L +L+ GK IH L + LG +D   V V  +L+ MY +CGD E + + F
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDD--VRVGTALMEMYFKCGDPETSLQIF 306

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                 ++V W +++   A NG   EA +   E  L     PD   ++  +  C+   L 
Sbjct: 307 KRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILLAALRACSFLSLK 365

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G ++HG+AI+     D+ +  +L+DFY K   +  A+ +F  ++   DLVSWN++ISG
Sbjct: 366 PRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLST-RDLVSWNALISG 424

Query: 355 L------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                        F++M     + +  T+  IL  C     +   K +HC+ L+  F  N
Sbjct: 425 FAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETN 484

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            +  N+L+  Y  CGD+ ++ ++ +++   ++ + WN +++    +G   E   TF+ M 
Sbjct: 485 ALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVT-WNSILLGFGMHGRTDEMFATFEKM- 542

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA-LKSLM---GLDTRVQNALITMYGR 518
           ++ N  PD  T  +++S+C +      GK   G     S+M    L+ RV+         
Sbjct: 543 KEANIKPDHGTFTSLLSSCSH-----SGKVDAGWKYFNSMMEDYNLEPRVEQ-------- 589

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
                                + CM+    +     +A +L   +   P++    S+L++
Sbjct: 590 ---------------------YTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLAS 628

Query: 579 CTQLGVLRHGKQIHGHVFHL 598
           C   G  +  + +  H+F L
Sbjct: 629 CKNHGNTKLAEVVANHIFEL 648



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 232/487 (47%), Gaps = 19/487 (3%)

Query: 32  ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ 91
           E   +++  WN MI   V N C+ + L  F EM+E GI  DS+T+++++   +Q+  L  
Sbjct: 207 ELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAV 266

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+ +H L +  G+  D  +    + MY KCGD  +S   F      + V W ++M  C  
Sbjct: 267 GKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQ 326

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N YP + L +F E        D V L +A+ A + L     G  IH   IK+G++   +V
Sbjct: 327 NGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFV 386

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               +L+  Y +CGD+E A++ F+G++ +D+VSWNA+I GFA N   +EA     +MQ  
Sbjct: 387 G--GALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQ-S 443

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           + ++P+  T+  ++S+C    ++   + VH Y +R     + L+ NSL+  Y+K   +  
Sbjct: 444 KQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHS 503

Query: 332 AELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCN 379
           +  +F  + P+ + V+WNS++ G             F++M     +    T  ++L SC+
Sbjct: 504 SRTVFEKL-PVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCS 562

Query: 380 SPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               ++ G K  +                 ++ +    G+L  A+ L+  +  + D   W
Sbjct: 563 HSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIW 622

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPD-SVTLVNVISACGNLELAFEGKS-LHGL 496
             ++ +C  +G+ + A      + +   +S    V L N+    GNL   F  ++ +  +
Sbjct: 623 GSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQM 682

Query: 497 ALKSLMG 503
            LK   G
Sbjct: 683 GLKKQPG 689


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 200/609 (32%), Positives = 325/609 (53%), Gaps = 32/609 (5%)

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           + L   +S  V + N+ ++M+ + G++  A   F  M+ +++ SWN ++ G+A  G F+E
Sbjct: 119 VALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE 178

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A  L H M  +  V+PD+ T   ++  C     L  GR VH + +R     D+ ++N+L+
Sbjct: 179 AICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALI 238

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             Y K   +  A LLF+ + P  D++SWN+MISG            LF  M  L      
Sbjct: 239 TMYVKCGDVKSARLLFDRM-PRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDL 297

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            TL +++ +C        G+ IH + +  GF+ +    N+L  MY+  G    A  L  R
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSR 357

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +    D   W  +I     N   ++AI T++ M  Q +  PD +T+  V+SAC  L    
Sbjct: 358 MD-CKDIVSWTTMISGYEYNFLPEKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLD 415

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G  LH LA+K+ +     V N LI MY +C+ I  A  +F +    N+ +W  +I+   
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475

Query: 549 QNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
            N     AL  FR ++   +PN I++ + L+AC ++G L  GK+IH HV   G   + F+
Sbjct: 476 LNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL 535

Query: 607 SSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            +ALLDMY  C              K  ++W+ +++ Y   G+G   +ELF  M  + +R
Sbjct: 536 PNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVR 595

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P + + ISLL  C  S +V +GL Y++ M EEY V P  +H+ C+VD+LGR+G+LQEA++
Sbjct: 596 PDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHK 654

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
           FI+ +P+ P P VWGA+L+AC  H +  +G+  A+ +F+L+  +VGYYI L N+Y   G+
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGK 714

Query: 773 WKDAVEIGK 781
           W++  ++ +
Sbjct: 715 WREVAKVRR 723



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 234/475 (49%), Gaps = 21/475 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV-EEGIRFDSTTLLIIVSALTQMN 87
           +F +   +++ +WN ++    +       +  +  M+   G++ D  T   ++     + 
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L +GR VH   ++ G   D  + N  + MY KCGD+ S+   F  M   D +SWN ++S
Sbjct: 211 DLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N    + L  F  M       D ++L+S ++A   LG+   G+ IHA  I  G+  
Sbjct: 271 GYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF-- 328

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  +SV NSL  MY   G    AE+ F  M CKD+VSW  +I G+  N   E+A D  + 
Sbjct: 329 AVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAID-TYR 387

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKS 326
           M    SV+PD  TV  ++S CA    L  G  +H  AI+ RL+ Y +++ N+L++ YSK 
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY-VIVANNLINMYSKC 446

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL-----------FKEMLYLCSQFSFSTLLAIL 375
             + KA  +F+ I P  +++SW S+I+GL           F   + +  Q +  TL A L
Sbjct: 447 KCIDKALDIFHNI-PRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAAL 505

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    +L  GK IH   L+ G   +    NAL+ MY+ CG +  A++  Q  S   D 
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWN--QFNSQKKDV 563

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           S WNI++   ++ G     ++ F  M + +   PD +T ++++  CG  ++  +G
Sbjct: 564 SSWNILLTGYSERGQGSVVVELFDRMVKAR-VRPDEITFISLLCGCGKSQMVRQG 617



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 257/548 (46%), Gaps = 24/548 (4%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +     M E  +  D    + +V         ++G  V+ +++ +       L N F+ 
Sbjct: 78  AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLA 137

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNV 175
           M+ + G+L  +   F  M   +  SWN ++ G     Y ++ +  +  M W  G + D  
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVY 197

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +    +     + +L+ G+ +H   ++ GYE    + V N+LI+MY +CGD+++A   F 
Sbjct: 198 TFPCVLRTCGGIPDLARGREVHVHVVRYGYELD--IDVVNALITMYVKCGDVKSARLLFD 255

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  +D++SWNA+I G+  NG   E   L   M+ + SV+PD+ T+ ++IS C      R
Sbjct: 256 RMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGL-SVDPDLMTLTSVISACELLGDRR 314

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            GR +H Y I      D+ + NSL   Y  + S  +AE LF+ +    D+VSW +MISG 
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTTMISGY 373

Query: 356 FKEML--------YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
               L         +  Q S      T+ A+L +C +   L+ G  +H   +K    +  
Sbjct: 374 EYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           I  N L++MY  C  +  A  +   I   +  S W  +I     N    EA+  F+ M  
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFEALIFFRQM-- 490

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    P+++TL   ++AC  +     GK +H   L++ +GLD  + NAL+ MY RC  + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
            A   F S    ++ +WN +++ +S+       +ELF  +      P+EI+ +S+L  C 
Sbjct: 551 IAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCG 609

Query: 581 QLGVLRHG 588
           +  ++R G
Sbjct: 610 KSQMVRQG 617



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 217/456 (47%), Gaps = 18/456 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +    +L+T Y      +S+  LF     +D+++WNAMI+   EN     GL  F
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLF 285

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    +  D  TL  ++SA   +   + GR +H   I  G   D S+CN    MY   
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYA 345

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +E  FS M C D VSW T++SG  +N  PEK +  +R M     + D +++++ +
Sbjct: 346 GSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVL 405

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG+L  G  +H L IK       YV V N+LI+MYS+C  I+ A   F  +  K+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARL--ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW +II G  LN +  EA     +M++  +++P+  T+   ++ CA    L  G+ +H
Sbjct: 464 VISWTSIIAGLRLNNRCFEALIFFRQMKM--TLQPNAITLTAALAACARIGALMCGKEIH 521

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +R  +G D  + N+L+D Y +   ++ A   FN  +   D+ SWN +++G       
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN--SQKKDVSSWNILLTGYSERGQG 579

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  M+    +    T +++L  C   + +  G        + G + N      +
Sbjct: 580 SVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACV 639

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           + +    G+L  A   +Q++    D + W  ++ AC
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 20/241 (8%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG  +EA+K   SM Q+   + D    V ++  C       EG  ++ +AL S+  L   
Sbjct: 72  NGKLEEAMKLLNSM-QELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVE 130

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
           + NA + M+ R  ++  A  VF      NL +WN ++  +++      A+ L+  + +  
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVG 190

Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
             +P+  +   +L  C  +  L  G+++H HV   G++ +  + +AL+ MY  C      
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    +   +W++MIS Y  +G G E ++LF  M    + P   ++ S++SAC   
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 669 G 669
           G
Sbjct: 311 G 311


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 210/699 (30%), Positives = 360/699 (51%), Gaps = 64/699 (9%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN--NYPEKCLLYFREMGWSG 169
           N  ++   + GDL+++     GM   + VSWNT++S    +  +  E   +Y R M   G
Sbjct: 78  NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGR-MRAEG 136

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
               + +L+S ++A   L  L  G+  H + +K+G + + +V   N+L+ MY++CG +  
Sbjct: 137 LLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVE--NALLGMYTKCGSVGD 194

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLC 288
           A R F+GM   + VS+ A++ G A  G  ++A  L   M   RS  P D  +V +++  C
Sbjct: 195 AVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARM--CRSGVPVDPVSVSSVLGAC 252

Query: 289 ADS--------LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           A +           R G+++H   +R+  G D  + NSL+D Y+K   + +A  +F ++ 
Sbjct: 253 AQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL- 311

Query: 341 PMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLG 398
           P   +VSWN +I+G  +E                  SC         K++    L  + G
Sbjct: 312 PSVTIVSWNILITGFGQE-----------------GSC--------AKAVEVLSLMQEAG 346

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F  N +  + L+   I   D+ +A ++  +IS  S T+ WN ++    Q    Q+ I+ F
Sbjct: 347 FEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTT-WNTLLSGYCQEEQHQDTIELF 405

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           + M Q QN  PD  TL  ++S+C  L +   G+ +H  +++ L+  D  V + L+ MY +
Sbjct: 406 RRM-QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSK 464

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSI 575
           C  I  A ++F      ++  WN +IS  + +     A + F+ +      P E S  S+
Sbjct: 465 CGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASM 524

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           +++C++L  + HG+QIH  V   G+ +N ++ SAL+DMY+ C               K+ 
Sbjct: 525 INSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNI 584

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            AW+ MI  Y  +G G +A+ELF  M  +  +P   + I++L+ CSHSGLVD+ + ++N+
Sbjct: 585 VAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNS 644

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M   Y + P  EH+ C++D LGR+G+  E    I  +P +  P +W  +L+AC  H + +
Sbjct: 645 MENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAE 704

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +GK  AE LF+++P+N   Y+ LSN+Y +LGR  DA  +
Sbjct: 705 LGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAV 743



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 178/679 (26%), Positives = 302/679 (44%), Gaps = 89/679 (13%)

Query: 14  LTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-MGLHFFGEMVEEGIRFD 72
           L+A       +++  L      ++ V+WN +I+A   +       +  +G M  EG+   
Sbjct: 81  LSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPT 140

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL  ++SA   +  L  GR  H +++K G+ A+  + N  + MY KCG +  +   F 
Sbjct: 141 HFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFY 200

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA--ASACLGEL 190
           GM   + VS+  +M G       +  L  F  M  SG   D VS+SS +   A AC  + 
Sbjct: 201 GMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDY 260

Query: 191 SY------GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           S       G+ IHAL ++ G+    +V   NSLI MY++C +++ A + F  +    +VS
Sbjct: 261 SVARAFRLGQAIHALVVRKGFGSDQHVG--NSLIDMYTKCVEMDEAVKVFESLPSVTIVS 318

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I GF   G   +A ++L  MQ     EP+  T   L++ C       + R VH   
Sbjct: 319 WNILITGFGQEGSCAKAVEVLSLMQ-EAGFEPNEVTYSNLLASCI------KARDVH--- 368

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
                                      A  +F+ I+    + +WN+++SG          
Sbjct: 369 --------------------------SARAMFDKIS-RPSVTTWNTLLSGYCQEEQHQDT 401

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF+ M +   Q   +TL  IL SC+    L+FG+ +H   ++    N+    + L+ M
Sbjct: 402 IELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDM 461

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG +  A S+  +++   D  CWN +I   T +   +EA   FK M ++    P   
Sbjct: 462 YSKCGQIGIARSIFNKMTER-DVVCWNSIISGLTIHSLNKEAFDFFKQM-RENGIMPTES 519

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           +  ++I++C  L     G+ +H   +K     +  V +ALI MY +C ++  A   F++ 
Sbjct: 520 SYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 579

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
              N+  WN MI  ++QN    +A+ELF ++   E +P+ ++ +++L+ C+  G++    
Sbjct: 580 MMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAM 639

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
                +      ENS+    L + Y         + +I A G  G+  E   L H+M   
Sbjct: 640 AFFNSM------ENSYGIIPLAEHY---------TCLIDALGRAGRFVEVEALIHKM--- 681

Query: 650 GIRPTKSSVI---SLLSAC 665
              P K   I    LL+AC
Sbjct: 682 ---PCKDDPIIWEVLLAAC 697



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 182/357 (50%), Gaps = 12/357 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T ++LL +        S+ A+F +     V TWN +++   +       +  F
Sbjct: 346 GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 405

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + ++ D TTL +I+S+ +++  L  GR VH  S++  +  D  + +  V+MY+KC
Sbjct: 406 RRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKC 465

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   D V WN+I+SG   ++  ++   +F++M  +G      S +S +
Sbjct: 466 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 525

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + + L  + +G+ IHA  +K GY+ + YV   ++LI MY++CG+++ A   F  M  K+
Sbjct: 526 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVG--SALIDMYAKCGNMDDARLFFDTMMMKN 583

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           +V+WN +I G+A NG  ++A +L  E  L    +PD  T + +++ C+ S L+ +  +  
Sbjct: 584 IVAWNEMIHGYAQNGLGDKAVELF-EYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF 642

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
               + Y I  L  +       L+D   ++    + E L + +   +D + W  +++
Sbjct: 643 NSMENSYGIIPLAEH----YTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 695



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 166/376 (44%), Gaps = 37/376 (9%)

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN-GHFQEAIKTF 458
           S N    NA +      GDL AA  LL  +   +  S WN VI A  ++ G   EA++ +
Sbjct: 71  SPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVS-WNTVISALARSPGDGGEAVEMY 129

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M + +   P   TL +V+SACG L    +G+  HG+A+K  +  +  V+NAL+ MY +
Sbjct: 130 GRM-RAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTK 188

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSI 575
           C  +  A  +F      N  ++  M+   +Q  +   AL LF  +       + +S+ S+
Sbjct: 189 CGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSV 248

Query: 576 LSACTQ--------LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           L AC Q            R G+ IH  V   GF  +  + ++L+DMY+ C          
Sbjct: 249 LGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVF 308

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                 +  +W+ +I+ +G  G   +A+E+   M  +G  P + +  +LL++C  +  V 
Sbjct: 309 ESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVH 368

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGVWGAM 729
                ++ +      RP       ++    +  + Q+  E  + +    +QP       +
Sbjct: 369 SARAMFDKI-----SRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVI 423

Query: 730 LSACSHHGDTKMGKQV 745
           LS+CS  G    G+QV
Sbjct: 424 LSSCSKLGILDFGRQV 439



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 29/292 (9%)

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV- 554
           LA ++L   +    NA ++   R  D+ +A  +       N  +WN +ISA +++  +  
Sbjct: 64  LAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGG 123

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+E++  +  E   P   ++ S+LSAC  L  L  G++ HG    +G   N F+ +ALL
Sbjct: 124 EAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALL 183

Query: 612 DMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY+ C S                 ++++M+      G   +A+ LF  MC SG+     
Sbjct: 184 GMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPV 243

Query: 657 SVISLLSACSHSGLVDEGLQ---YYNNMLEEYDVRP--ETEHHV--CIVDMLGRSGKLQE 709
           SV S+L AC+ +   D  +         +    VR    ++ HV   ++DM  +  ++ E
Sbjct: 244 SVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDE 303

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGY 759
           A +  ++LP       W  +++     G      +V  L+ +   EP  V Y
Sbjct: 304 AVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTY 354



 Score = 42.7 bits (99), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 22/137 (16%)

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           N ++  +S+      AL  FR L   PN+ S  + LSA  + G L   + + G     G 
Sbjct: 47  NRLVELYSRAGLPRHALLAFRALP-SPNDYSYNAALSAACRAGDLDAARDLLG-----GM 100

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYH-GKGWEAIELFHEMCNSGIRPTKSSVI 659
              + +S               W+++ISA     G G EA+E++  M   G+ PT  ++ 
Sbjct: 101 PRRNAVS---------------WNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLA 145

Query: 660 SLLSACSHSGLVDEGLQ 676
           S+LSAC     + +G +
Sbjct: 146 SVLSACGGLAALGDGRR 162


>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
          Length = 1030

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 240/763 (31%), Positives = 377/763 (49%), Gaps = 83/763 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR +H L++K G    + +    ++MY + G L  +   F  M C+D V  N +++    
Sbjct: 113 GRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSR 172

Query: 152 NNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASAC--LGELSYGKVIHALGIKLGYEDS 208
                     FR M  SG +++   +++ AV    C  L  L  G+ IH   IK G E  
Sbjct: 173 AGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFD 232

Query: 209 PYVSVTNSLISMYSQCGD---IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
                 N+L+SMY++CG    ++ A  AF  + CKDVVSWN+II G++ NG FEEA  L 
Sbjct: 233 TLSG--NALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALF 290

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            +M +     P+ +T+  ++  C+     R  G+ +HG+ +R  L  D+ + N+LM  YS
Sbjct: 291 GQM-ISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K   +   E +F + + M D+V+WN++I+G            LF+ +L+        +L+
Sbjct: 350 KVCEMRAVESIFRS-SKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLI 408

Query: 373 AILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           ++L +C    +L  G  +H +  +       T  +NAL+  Y  C    AAF     I  
Sbjct: 409 SLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITI-Q 467

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI---SACGNLELAF 488
           N D+  WN ++ AC  + H  E                DSVT++N+I   + CG +++  
Sbjct: 468 NKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCG-IKMVQ 526

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES--------------CY- 533
           E    HG +L+     D+ V NA++  Y +C  +  A T+F S              CY 
Sbjct: 527 ES---HGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYL 583

Query: 534 --NC--------------NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
             NC              +L TWN M   ++QN    +A  LF  L+ E   P+ ISI +
Sbjct: 584 KNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITN 643

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           ILSAC  L  ++  KQ HG++      E+  +  ALLD YS C               K 
Sbjct: 644 ILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKD 702

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              +++MI AY  HG   +A+ELF +M    I+P    + +LLSACSH+GLVD G++ + 
Sbjct: 703 LVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFK 762

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGD 738
           ++ E Y V P  EH  C+VD+L RSG+LQ+AY F  ++P        WG++L AC  HG+
Sbjct: 763 SIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGE 822

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            K+G+  A+ LF +E E++G Y+ +SN++ A  +W+    + K
Sbjct: 823 VKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDKWESVEHVRK 865



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 180/702 (25%), Positives = 323/702 (46%), Gaps = 85/702 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +++  Y  +     +  +F E    D V  N +ITA           H F  M+  G
Sbjct: 131 VAKAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASG 190

Query: 69  IRFD---STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD-- 123
           +      + T+ +++    ++  L+ GR +H   IK G+  D+   N  V+MYAKCG   
Sbjct: 191 VDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSI 250

Query: 124 -LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            ++ +   FS + C D VSWN+I++G   N   E+ L  F +M  S E   N S  + V 
Sbjct: 251 AMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQM-ISEECLPNYSTLANVL 309

Query: 183 ASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
               L E    YGK IH   ++ G E    +SV+N+L++ YS+  ++ A E  F      
Sbjct: 310 PFCSLVEYGRHYGKEIHGFVVRHGLEMD--ISVSNALMAHYSKVCEMRAVESIFRSSKMG 367

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+WN +I G+ +N     A  L   + L   + PD  ++++L++ CA    LR G  V
Sbjct: 368 DIVTWNTVIAGYVMNRYPSRALKLFQGL-LFAGMAPDSVSLISLLTACAQVGNLRVGIRV 426

Query: 301 HGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           HGY  R   L  +  +MN+L+ FYS+ +    A   F  I    D VSWN+++S      
Sbjct: 427 HGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQN-KDSVSWNAILSACANSE 485

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   L  EM +  +Q+   T+L I+   ++   ++  +  H + L++G++ ++   
Sbjct: 486 HHIEQFFRLLGEMWHDVTQWDSVTILNII-RMSTFCGIKMVQESHGYSLRVGYTGDSSVA 544

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNS------------------------------DTS 436
           NA++  Y  CG L  A +L + ++  +                              D +
Sbjct: 545 NAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLT 604

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN++     QN    +A   F  + Q +  +PD++++ N++SAC +L      K  HG 
Sbjct: 605 TWNLMSRLYAQNDLCDQAFCLFHQL-QSEGLNPDTISITNILSACIHLSSVQLVKQCHGY 663

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            L++ +  D  ++ AL+  Y +C +I +A  +F+   + +L  +  MI A++ +    +A
Sbjct: 664 MLRASLE-DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKA 722

Query: 557 LELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL--------------- 598
           +ELF     L+ +P+ + + ++LSAC+  G++  G +I   +  +               
Sbjct: 723 VELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVD 782

Query: 599 -----GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
                G  ++++  S  LDM  +  +  AW S++ A   HG+
Sbjct: 783 LLARSGRLQDAY--SFALDMPPHVVNANAWGSLLGACKVHGE 822



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 186/686 (27%), Positives = 318/686 (46%), Gaps = 106/686 (15%)

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASA----CLGELSYGKVIHALGIKLGYEDSPYVSV 213
           C    R M   G + + ++L++AV +S+    C G  + G+ +H L +K+GY D   V+ 
Sbjct: 74  CTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVA- 132

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +++ MY + G +  A   F  M+C D V  N +I   +  G + + F L   M L   
Sbjct: 133 -KAVMDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAM-LASG 190

Query: 274 VE---PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK---SN 327
           V+   P   TV  ++ +CA   +LR GRS+HGY I+  L +D L  N+L+  Y+K   S 
Sbjct: 191 VDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSI 250

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF-------SFSTLLAIL 375
           ++  A L F+ I    D+VSWNS+I+     GLF+E L L  Q        ++STL  +L
Sbjct: 251 AMDDAHLAFSTIC-CKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVL 309

Query: 376 PSCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           P C+  E    +GK IH + ++ G   +    NALM  Y    ++ A  S+  R S   D
Sbjct: 310 PFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIF-RSSKMGD 368

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGK 491
              WN VI     N +   A+K F+ +     A PDSV+L+++++AC   GNL +   G 
Sbjct: 369 IVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMA-PDSVSLISLLTACAQVGNLRV---GI 424

Query: 492 SLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
            +HG   +    L +T + NAL++ Y +C    +A   F +  N +  +WN ++SA + +
Sbjct: 425 RVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANS 484

Query: 551 KAEVRALELFR------HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +  +   + FR      H   + + ++I++I+   T  G+ +  ++ HG+   +G+  +S
Sbjct: 485 EHHIE--QFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGI-KMVQESHGYSLRVGYTGDS 541

Query: 605 FISSALLDMYSNC----------------------------------------------K 618
            +++A+LD Y+ C                                              K
Sbjct: 542 SVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEK 601

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
               W+ M   Y  +    +A  LFH++ + G+ P   S+ ++LSAC H   V    Q +
Sbjct: 602 DLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCH 661

Query: 679 NNMLEE--YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
             ML     D+  E      ++D   + G +  AY   + + +     ++ AM+ A + H
Sbjct: 662 GYMLRASLEDIHLEG----ALLDAYSKCGNIANAYNLFQ-VSLHKDLVIFTAMIGAYAMH 716

Query: 737 GDTKMGKQVAELLFKL-----EPENV 757
           G   M ++  EL  K+     +P++V
Sbjct: 717 G---MAEKAVELFSKMLTLDIKPDHV 739



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 222/498 (44%), Gaps = 53/498 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  S +L+  YS V    +  ++F  +   D+VTWN +I   V NR     L  F
Sbjct: 333 GLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLF 392

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAK 120
             ++  G+  DS +L+ +++A  Q+  L+ G  VH    +   ++ ++SL N  V+ Y++
Sbjct: 393 QGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQ 452

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSS 179
           C   +++  +F  +   D+VSWN I+S C ++ ++ E+      EM     Q D+V++ +
Sbjct: 453 CDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILN 512

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD------------- 226
            +  S   G +   +  H   +++GY      SV N+++  Y++CG              
Sbjct: 513 IIRMSTFCG-IKMVQESHGYSLRVGYTGDS--SVANAILDAYAKCGYLHDAETLFRSLAG 569

Query: 227 ------------------IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
                             +E AE  F  M  KD+ +WN +   +A N   ++AF L H++
Sbjct: 570 RNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQL 629

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    + PD  ++  ++S C     ++  +  HGY +R  L  D+ +  +L+D YSK  +
Sbjct: 630 Q-SEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGALLDAYSKCGN 687

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           ++ A  LF  ++   DLV + +MI              LF +ML L  +     L A+L 
Sbjct: 688 IANAYNLFQ-VSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLS 746

Query: 377 SCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL-LQRISHNSD 434
           +C+    ++ G K     +   G          ++ +    G L  A+S  L    H  +
Sbjct: 747 ACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVN 806

Query: 435 TSCWNIVIVACTQNGHFQ 452
            + W  ++ AC  +G  +
Sbjct: 807 ANAWGSLLGACKVHGEVK 824



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  +    +LL AYS      ++  LF  + +KD+V + AMI A   +      +  
Sbjct: 666 RASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVEL 725

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+   I+ D   L  ++SA +    +  G ++   +    G+      C   V++ A
Sbjct: 726 FSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLA 785

Query: 120 KCGDLNSSECTFSGM--HCADTVSWNTIMSGC 149
           + G L  +      M  H  +  +W +++  C
Sbjct: 786 RSGRLQDAYSFALDMPPHVVNANAWGSLLGAC 817


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/630 (32%), Positives = 334/630 (53%), Gaps = 39/630 (6%)

Query: 184 SACLGELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AC   LS   G+ IH +  KLG++   +V   N+L+  Y  CG ++  +R F  M  +D
Sbjct: 15  KACADSLSVQKGREIHGVVFKLGFDSDVFVG--NTLLLFYGNCGGLKDVKRVFDEMLERD 72

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN++I  F+++G + EA  L  EM L     P++ ++V+++ +CA       GR +H
Sbjct: 73  VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
            Y ++  L   + + N+L+D Y K   +  +  +F+ I+  N  VSWN++I+ L      
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNG-VSWNAIITSLAYLERN 191

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F+ M+    + +  T  ++LP     +  +FGK IH + L+ G  ++    NAL
Sbjct: 192 QDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANAL 251

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY   G  + A ++  +I   +  S WN ++    QN     A+   + M Q     P
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEKNIVS-WNAMVANFAQNRLELAAVDLVRQM-QADGEIP 309

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           +SVT  NV+ AC  +     GK +H  A+++   +D  V NAL  MY +C  +  A  VF
Sbjct: 310 NSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF 369

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS---ILSACTQLGVLR 586
           +     +  ++N +I  +SQ      +L LF  +  +  ++ +VS   ++SAC  L  L+
Sbjct: 370 KISLR-DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALK 428

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GK++HG         + FI++ALLD Y  C               +  A+W+SMI  YG
Sbjct: 429 QGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYG 488

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             G+   AI LF  M   G+     S I++LSACSH GLV+EG +Y+ +M +  +++P  
Sbjct: 489 MLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQ 547

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            H+ C+VD+LGR+G ++EA + I++LPI+P   VWGA+L AC  HG  ++    AE LFK
Sbjct: 548 MHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFK 607

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L+P++ GYY  LSNMY   G+W +A ++ K
Sbjct: 608 LKPQHSGYYSVLSNMYAEAGKWDEANQVRK 637



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 182/678 (26%), Positives = 321/678 (47%), Gaps = 51/678 (7%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+R D  T   ++ A      +++GR +H +  K G  +D  + N  +  Y  CG L   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 128 ECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +  F  M   D VSWN+++    +H  Y E   L+      SG + + VS+ S +   A 
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L +   G+ IH   +K G +    V+V N+L+ +Y +CG ++ + R F  ++ ++ VSWN
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQ--VTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           AII   A   + ++A ++   M +   V+P+  T  +++ +  +  L   G+ +HG+++R
Sbjct: 180 AIITSLAYLERNQDALEMFRLM-IDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS-- 364
             L  D+ + N+L+D Y+KS    +A  +FN I   N +VSWN+M++   +  L L +  
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKN-IVSWNAMVANFAQNRLELAAVD 297

Query: 365 ---QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
              Q           T   +LP+C     L  GK IH   ++ G S +    NAL  MY 
Sbjct: 298 LVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYA 357

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  +  +IS   + S +NI+I+  +Q  +  E+++ F  M   +    D V+ 
Sbjct: 358 KCGCLNLARRVF-KISLRDEVS-YNILIIGYSQTTNCSESLRLFLEMG-IKGMKLDVVSY 414

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           + VISAC NL    +GK +HGLA++  +     + NAL+  Y +C  I  A  VF    +
Sbjct: 415 MGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPS 474

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            +  +WN MI  +        A+ LF  ++    E + +S +++LSAC+  G++  GK+ 
Sbjct: 475 RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKY 534

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCK-SNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
             H+                    N K +   ++ M+   G  G   EA++L   +    
Sbjct: 535 FEHM-----------------QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESL---P 574

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQE 709
           I P  +   +LL AC   G ++       ++   + ++P+ + ++  + +M   +GK  E
Sbjct: 575 IEPDANVWGALLGACRIHGYIELAHWAAEHL---FKLKPQHSGYYSVLSNMYAEAGKWDE 631

Query: 710 A---YEFIKNLPIQPKPG 724
           A    + +K+   +  PG
Sbjct: 632 ANQVRKLMKSRGAKKNPG 649



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 167/627 (26%), Positives = 280/627 (44%), Gaps = 52/627 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +LL  Y N    +    +F E   +DVV+WN++I     +      +H F
Sbjct: 37  GFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLF 96

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM +  G R +  +++ ++     +     GR +HC  +K G+ +  ++ N  V++Y K
Sbjct: 97  CEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGK 156

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  S   F  +   + VSWN I++   +    +  L  FR M   G + ++V+ SS 
Sbjct: 157 CGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSM 216

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     L    +GK IH   ++ G E   +V+  N+LI MY++ G    A   F  +  K
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFGLESDIFVA--NALIDMYAKSGRSLQASNVFNQIGEK 274

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VSWNA++  FA N     A DL+ +MQ    + P+  T   ++  CA    LR G+ +
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEI-PNSVTFTNVLPACARIGFLRPGKEI 333

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H  AIR     DL + N+L D Y+K   L+ A  +F     + D VS+N +I G      
Sbjct: 334 HARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK--ISLRDEVSYNILIIGYSQTTN 391

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EM     +    + + ++ +C +  +L+ GK +H   ++     +    NA
Sbjct: 392 CSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANA 451

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  YI CG +  A  + ++I  + DT+ WN +I+     G    AI  F++M ++    
Sbjct: 452 LLDFYIKCGRIDLAGKVFRQIP-SRDTASWNSMILGYGMLGELTIAINLFEAM-KEDGVE 509

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            DSV+ + V+SAC +  L  EGK               +VQN           IK     
Sbjct: 510 YDSVSYIAVLSACSHGGLVEEGKKYFE---------HMQVQN-----------IKPTQM- 548

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                      + CM+    +      A++L   L  EP+     ++L AC   G +   
Sbjct: 549 ----------HYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELA 598

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYS 615
                H+F L  Q + +  S L +MY+
Sbjct: 599 HWAAEHLFKLKPQHSGYY-SVLSNMYA 624


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 191/596 (32%), Positives = 320/596 (53%), Gaps = 34/596 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S++S+ G I  A R F  +  K    ++ ++ G+A N   E A   L  M+    V+
Sbjct: 86  KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVK 144

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ +C D+  L+ G+ +HG  I      ++  M  +++ Y+K   +  A  +
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204

Query: 336 FNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPES 383
           F+ + P  DLVSWN++I+G       K+ L L  +           TL+ +LP+      
Sbjct: 205 FDRM-PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  GKSIH + ++ GF+       AL  MY  CG +  A  +   +   +  S WN ++ 
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-WNSMMD 322

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG  ++AI  F+ M ++    P  VT++  + AC +L     GK +H    +  +G
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF--- 560
            D  V N+LI+MY +C+ +  AS +F +       +WN MI  ++QN     AL  F   
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           + L  +P+  ++VS++ A  +L V RH K IHG +      +N F+++AL+DMYS C   
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG HG G  A++LF +M    + P   + +S++SAC
Sbjct: 502 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGLVDEGL+++ +M ++Y + P  +H+  +VD+LGR+G+++EA++FI+N+PI P   V
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 621

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +GAML AC  H + ++G++ A+ LF+L P+  GY++ L+N+Y +  +W    E+ K
Sbjct: 622 YGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRK 677



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 274/583 (46%), Gaps = 39/583 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L++ +S       +  +F    +K    ++ M+    +N  +   L F   M  + ++
Sbjct: 85  TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF-----VNMYAKCGDLN 125
                   ++        LK+G+ +H       +I +S   NVF     VNMYAKC  ++
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIH-----GQLITNSFAANVFAMTGVVNMYAKCRQID 199

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   D VSWNTI++G   N + +K L     M   G++ D+++L + + A+A
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +G L  GK IH   I+ G+  +  V+++ +L  MYS+CG +E A   F GM  K VVSW
Sbjct: 260 DVGLLMVGKSIHGYAIRAGF--AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N+++DG+  NG+ E+A  +  +M L   ++P   T++  +  CAD   L  G+ VH +  
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKM-LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
           +  LG D+ +MNSL+  YSK   +  A  +FN +      VSWN+MI G           
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH-VSWNAMILGYAQNGRVSEAL 435

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F EM  L  +    T+++++P+          K IH   ++     N     AL+ MY
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMY 495

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  L   IS +     WN +I     +G  + A+  F  M ++    P+ +T
Sbjct: 496 SKCGAIHMARKLFDMIS-DRHVITWNAMIDGYGTHGLGRAALDLFDKM-KKGAVEPNDIT 553

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            ++VISAC +  L  EG   H  ++K   GL+  + +  A++ + GR   IK A    E+
Sbjct: 554 YLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612

Query: 532 C-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNE 569
              +  +  +  M+ A   +K     E  A +LF   E  P+E
Sbjct: 613 MPISPGITVYGAMLGACKIHKNIEVGEKAAKKLF---ELNPDE 652



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 251/519 (48%), Gaps = 25/519 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A++   T ++  Y+     + +  +F     +D+V+WN +I    +N      L    
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M +EG R DS TL+ ++ A   +  L  G+ +H  +I+AG     ++     +MY+KCG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            + ++   F GM     VSWN++M G + N  PEK +  F +M   G     V++  A+ 
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A LG+L  GK +H    +L       +SV NSLISMYS+C  ++ A   F  +  +  
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSD--ISVMNSLISMYSKCKRVDIASDIFNNLNGRTH 415

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWNA+I G+A NG+  EA +   EM+ +  ++PD  T+V++I   A+  + R  + +HG
Sbjct: 416 VSWNAMILGYAQNGRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTRHAKWIHG 474

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
             IR  L  ++ +  +L+D YSK  ++  A  LF+ I+  + +++WN+MI G        
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHGLGR 533

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
               LF +M     + +  T L+++ +C+    ++ G +     +   G   +     A+
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +    G +  A+  ++ +  +   + +  ++ AC  + + +   K  K + +    +P
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFE---LNP 650

Query: 470 DS----VTLVNVISACGNL-ELAFEGKSLHGLALKSLMG 503
           D     V L N+ ++     ++A   K++    LK   G
Sbjct: 651 DEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPG 689



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 158/296 (53%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  ST+L   YS     E++  +F     K VV+WN+M+   V+N      +  F
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+EEGI     T++  + A   +  L++G+ VH    +  + +D S+ N  ++MY+KC
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ +   F+ ++    VSWN ++ G   N    + L  F EM   G + D+ ++ S +
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L    + K IH L I+   + +  + VT +L+ MYS+CG I  A + F  ++ + 
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKN--IFVTTALVDMYSKCGAIHMARKLFDMISDRH 515

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V++WNA+IDG+  +G    A DL  +M+   +VEP+  T +++IS C+ S L+ EG
Sbjct: 516 VITWNAMIDGYGTHGLGRAALDLFDKMK-KGAVEPNDITYLSVISACSHSGLVDEG 570


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 229/777 (29%), Positives = 392/777 (50%), Gaps = 54/777 (6%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR------ 93
           TW   ++ CV     V        M E G+      L  +V+A     C ++GR      
Sbjct: 8   TWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTA-----CERRGRDEGIAC 62

Query: 94  --VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
              +H L+ +AG++ +  +    +++Y   G ++ +   F  M   + VSW  +M     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N Y E+ L  +R+M   G   +  + ++ V+    L     G  + +  I  G ++   V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ--V 180

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           SV NSLI+M+   G ++ AE+ F  M   D +S NA+I  ++  G   + F +  +M+  
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMR-H 239

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             + PD  T+ +L+S+CA +     G  +H   +R  L   + ++N+L++ YS +  LS 
Sbjct: 240 HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFS-------TLLAILPSCN 379
           AE LF  ++   DL+SWN+MIS   +     + L    Q   +       T  + L +C+
Sbjct: 300 AEFLFWNMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           SP +L  GK +H   L+L    N +  N+L+ MY  C  +  A  + Q +    D   +N
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDVVSYN 417

Query: 440 IVI--VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI-SACGNLELAFEGKSLHGL 496
           ++I   A  ++G   +A++ F S  +     P+ +T++N+  S   + +L   G+ LH  
Sbjct: 418 VLIGGYAVLEDG--TKAMQVF-SWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAY 474

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +++    D  V N+LITMY +C +++S++ +F S  N N+ +WN +I+A +Q      A
Sbjct: 475 IIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEA 534

Query: 557 LELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L+LF  ++   N++  V +   LS+C  L  L  G Q+HG     G   +S++ +A +DM
Sbjct: 535 LKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDM 594

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y  C               +    W+++IS Y  +G   EA E F +M   G +P   + 
Sbjct: 595 YGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTF 654

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           ++LLSACSH+GLVD+G+ YYN+M   + V P  +H VCIVD+LGR G+  EA  FI+ +P
Sbjct: 655 VALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMP 714

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           + P   +W ++LS+   H + ++G++ A+ L +L+P +   Y+ LSN+Y    RW D
Sbjct: 715 VLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVD 771



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 175/605 (28%), Positives = 299/605 (49%), Gaps = 26/605 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +      +  LF+E   ++VV+W A++ A   N  +   L  +
Sbjct: 74  GLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAY 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  ++     +VS    +     G  V    I +G+    S+ N  + M+   
Sbjct: 134 RQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNL 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  F  M   DT+S N ++S   H     KC L F +M   G + D  +L S +
Sbjct: 194 GRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLM 253

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A     S+G  IH+L ++   + S  V+V N+L++MYS  G +  AE  FW M+ +D
Sbjct: 254 SVCASADHFSHGSGIHSLCLRSSLDSS--VTVINALVNMYSAAGKLSDAEFLFWNMSRRD 311

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSV 300
           ++SWN +I  +  N    +A   L   QL  + E P+  T  + +  C+    L +G+ V
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLG--QLFHTNEIPNHLTFSSALGACSSPGALIDGKMV 369

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L  +LL+ NSL+  Y K NS+  AE +F ++ P +D+VS+N +I G      
Sbjct: 370 HAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSM-PTHDVVSYNVLIGGYAVLED 428

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGVN 407
                 +F  +     + ++ T++ I  S  S   L  +G+ +H + ++ GF ++    N
Sbjct: 429 GTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVAN 488

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY  CG+L ++ ++   I+ N +   WN +I A  Q GH +EA+K F  M Q    
Sbjct: 489 SLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAANAQLGHGEEALKLFIDM-QHAGN 546

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-S 526
             D V L   +S+C +L    EG  LHGL +KS +  D+ V NA + MYG+C  +     
Sbjct: 547 KLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQ 606

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLG 583
            V +       C WN +IS +++      A E F+    +  +P+ ++ V++LSAC+  G
Sbjct: 607 MVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAG 665

Query: 584 VLRHG 588
           ++  G
Sbjct: 666 LVDKG 670


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 209/717 (29%), Positives = 356/717 (49%), Gaps = 36/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  S+  G+ AD  + N+ +++YAK G +  +   F  +   D VSW  ++SG      
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGL 124

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            ++    + +M W+        LSS ++A       + G++IHA   K  +    +V   
Sbjct: 125 GKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG-- 182

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LI++Y   G  + AER F  M   D V++N +I G A  G  E A  +  EMQL   +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL-SGL 241

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  TV +L++ CA    L++G+ +H Y ++  + +D +   SL+D Y K   +  A  
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +FN +    ++V WN M+              +F +M       +  T   IL +C    
Sbjct: 302 IFN-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +E G+ IH   +K GF ++      L+ MY     L  A  +L+ +    D   W  +I
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMI 419

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q+   +EA+ TFK M Q     PD++ L +  SAC  ++   +G  +H     S  
Sbjct: 420 AGYVQHDFCEEALATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  + N L+ +Y RC   + A ++F    + +  TWN +IS F Q++   +AL +F  
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMK 538

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +     + N  + +S +SA   L  ++ GKQ+HG     G    + +++AL+ +Y  C  
Sbjct: 539 MSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        ++  +W+++I++   HG+G EA++LF +M   G++P   + I +L+A
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH GLV+EGL Y+ +M   Y + P  +H+ C+VD+LGR+G+L  A  F+  +PI     
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM 718

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +W  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y   G+W +  ++ K
Sbjct: 719 IWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 775



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 293/604 (48%), Gaps = 23/604 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  A       L+  Y+       +  +F E  ++D V+W AM++   +          
Sbjct: 72  RGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRL 131

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M    +      L  ++SA T+     QGR++H    K    +++ + N  + +Y  
Sbjct: 132 YSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLG 191

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G    +E  F  M   D V++NT++SG     + E  L  F EM  SG + D V+++S 
Sbjct: 192 FGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASL 251

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A +G+L  GK +H+  +K G     Y++   SL+ +Y +CGDIE A   F      
Sbjct: 252 LAACASVGDLQKGKQLHSYLLKAGMS-FDYIT-EGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN ++  +       ++F++  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQAT-GIHPNKFTYPCILRTCTCTGQIELGEQI 368

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +I+     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 369 HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEK-RDVVSWTSMIAGYVQHDF 427

Query: 356 -------FKEMLYLCSQFSFSTLLAILPS-CNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  FKEM   C  +  +  LA   S C   +++  G  IH      G++ +    N
Sbjct: 428 CEEALATFKEM-QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+++Y  CG    AFSL + I H  + + WN +I    Q+  +++A+  F  M+ Q  A
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIDHKDEIT-WNGLISGFGQSRLYEQALMVFMKMS-QAGA 544

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             +  T ++ ISA  NL    +GK +HG A+K+    +T V NALI++YG+C  I+ A  
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKM 604

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           +F      N  +WN +I++ SQ+   + AL+LF  ++ E   PN+++ + +L+AC+ +G+
Sbjct: 605 IFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 664

Query: 585 LRHG 588
           +  G
Sbjct: 665 VEEG 668



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 218/460 (47%), Gaps = 37/460 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  SLL  Y      E++  +F      +VV WN M+ A  +   +      FG+M   G
Sbjct: 282 TEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG 341

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  +  T   I+   T    ++ G  +H LSIK G  +D  +  V ++MY+K   L+ + 
Sbjct: 342 IHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKAR 401

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
                +   D VSW ++++G + +++ E+ L  F+EM   G   DN+ L+SA +A A + 
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIK 461

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G  IHA     GY  +  +S+ N+L+++Y++CG  E A   F  +  KD ++WN +
Sbjct: 462 AMRQGLQIHARVYVSGY--AADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGL 519

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF  +  +E+A  +  +M      + ++ T ++ IS  A+   +++G+ VHG A++  
Sbjct: 520 ISGFGQSRLYEQALMVFMKMS-QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              +  + N+L+  Y K  S+  A+++F+ ++  N+ VSWN++I+             LF
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE-VSWNTIITSCSQHGRGLEALDLF 637

Query: 357 KEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            +M     + +  T + +L +C+      E L + KS+          +N  G+N +   
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM----------SNVYGLNPIPDH 687

Query: 413 YI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           Y          G L  A   +  +   ++   W  ++ AC
Sbjct: 688 YACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 179/355 (50%), Gaps = 6/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S  L+  YS     + +  +      +DVV+W +MI   V++      L  F
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + G+  D+  L    SA   +  ++QG  +H     +G  AD S+ N  VN+YA+C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D ++WN ++SG   +   E+ L+ F +M  +G + +  +  SA+
Sbjct: 496 GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAI 555

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L ++  GK +H   +K G+  +    V N+LIS+Y +CG IE A+  F  M+ ++
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGH--TSETEVANALISLYGKCGSIEDAKMIFSEMSLRN 613

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II   + +G+  EA DL  +M+    ++P+  T + +++ C+   L+ EG S +
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMK-QEGLKPNDVTFIGVLAACSHVGLVEEGLS-Y 671

Query: 302 GYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             ++  + G + +  +   ++D   ++  L +A    + +    + + W +++S 
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 225/694 (32%), Positives = 357/694 (51%), Gaps = 41/694 (5%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQA 172
            +  YA  G  +SS   F      D+  +  ++   +  +  +  + LY R +  + + +
Sbjct: 40  LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
             V  S   A +     LS G  +H   IK G +D   +    SL+ MY Q G++  AE+
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE--TSLLCMYGQTGNLSDAEK 157

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F GM  +D+V+W+ ++     NG+  +A  +   M +   VEPD  T+++++  CA+  
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAELG 216

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            LR  RSVHG   R++   D  + NSL+  YSK   L  +E +F  IA  N  VSW +MI
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN-AVSWTAMI 275

Query: 353 SGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           S              F EM+    + +  TL ++L SC     +  GKS+H + ++    
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335

Query: 401 NNTIGVN-ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            N   ++ AL+ +Y  CG L    ++L R+  + +   WN +I      G   +A+  F+
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVL-RVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  Q+   PD+ TL + ISAC N  L   GK +HG  +++ +  D  VQN+LI MY + 
Sbjct: 395 QMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKS 452

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSIL 576
             + SASTVF    + ++ TWN M+  FSQN   V A+ LF    H   E NE++ ++++
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAWS----------- 624
            AC+ +G L  GK +H  +   G ++  F  +AL+DMY+ C   NAA +           
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571

Query: 625 ---SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
              SMI+AYG HG+   AI  F++M  SG +P +   +++LSAC HSG V+EG +YY N+
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNL 630

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           ++ + V P +EH  C +D+L RSG L+EAY  IK +P      VWG++++ C  H    +
Sbjct: 631 MKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            K +   L  +  ++ GYY  LSN+Y   G W++
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEE 724



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/549 (30%), Positives = 277/549 (50%), Gaps = 20/549 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLL  Y        +  +F     +D+V W+ ++++C+EN  VV  L  F  MV++G+ 
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D+ T++ +V    ++ CL+  R VH    +     D +LCN  + MY+KCGDL SSE  
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSW  ++S      + EK L  F EM  SG + + V+L S +++   +G +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   ++    D  Y S++ +L+ +Y++CG +   E     ++ +++V+WN++I 
Sbjct: 320 REGKSVHGFAVRREL-DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A  G   +A  L  +M   R ++PD  T+ + IS C ++ L+  G+ +HG+ IR  + 
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D  + NSL+D YSKS S+  A  +FN I     +V+WNSM+ G            LF  
Sbjct: 438 -DEFVQNSLIDMYSKSGSVDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M +   + +  T LA++ +C+S  SLE GK +H  +L +    +     AL+ MY  CGD
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGD 554

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L AA ++  R   +     W+ +I A   +G    AI TF  M  +    P+ V  +NV+
Sbjct: 555 LNAAETVF-RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNVL 612

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCYNCNL 537
           SACG+     EGK    L     +  ++      I +  R  D+K A  T+ E  +  + 
Sbjct: 613 SACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672

Query: 538 CTWNCMISA 546
             W  +++ 
Sbjct: 673 SVWGSLVNG 681



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 181/629 (28%), Positives = 311/629 (49%), Gaps = 30/629 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           LP  T L+ +Y+ +   +SS  +F      D   +  +I   V    +   +  +  +V 
Sbjct: 35  LPV-TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVS 93

Query: 67  EGIRFDSTTLLIIVSALT-QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           E  +        ++ A       L  G  VH   IK G+  D+ +    + MY + G+L+
Sbjct: 94  ETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLS 153

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +E  F GM   D V+W+T++S CL N    K L  F+ M   G + D V++ S V   A
Sbjct: 154 DAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCA 213

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            LG L   + +H    +  ++     ++ NSL++MYS+CGD+ ++ER F  +  K+ VSW
Sbjct: 214 ELGCLRIARSVHGQITRKMFDLDE--TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I  +      E+A     EM +   +EP++ T+ +++S C    L+REG+SVHG+A+
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330

Query: 306 RRLL--GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
           RR L   Y+ L + +L++ Y++   LS  E +   ++  N +V+WNS+IS          
Sbjct: 331 RRELDPNYESLSL-ALVELYAECGKLSDCETVLRVVSDRN-IVAWNSLISLYAHRGMVIQ 388

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
             GLF++M+    +    TL + + +C +   +  GK IH   ++   S+  +  N+L+ 
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLID 447

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G + +A ++  +I H S  + WN ++   +QNG+  EAI  F  M        + 
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVT-WNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNE 505

Query: 472 VTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           VT + VI AC ++    +GK + H L +  L  L T    ALI MY +C D+ +A TVF 
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT--DTALIDMYAKCGDLNAAETVFR 563

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
           +  + ++ +W+ MI+A+  +     A+  F  +     +PNE+  +++LSAC   G +  
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSN 616
           GK     +   G   NS   +  +D+ S 
Sbjct: 624 GKYYFNLMKSFGVSPNSEHFACFIDLLSR 652



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 170/350 (48%), Gaps = 15/350 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S +L+  Y+          +     ++++V WN++I+       V+  L  F +MV + I
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D+ TL   +SA      +  G+ +H   I+   ++D  + N  ++MY+K G ++S+  
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSAST 460

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F+ +     V+WN+++ G   N    + +  F  M  S  + + V+  + + A + +G 
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H   I  G +D   +    +LI MY++CGD+ AAE  F  M+ + +VSW+++I
Sbjct: 521 LEKGKWVHHKLIISGLKD---LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           + + ++G+   A    ++M +    +P+    + ++S C  S  + EG+  + + + +  
Sbjct: 578 NAYGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGHSGSVEEGK--YYFNLMKSF 634

Query: 310 GYDLLMMNS-----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           G   +  NS      +D  S+S  L +A      +  + D   W S+++G
Sbjct: 635 G---VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L  L T T+L+  Y+      ++  +F    ++ +V+W++MI A   +  +   +  F +
Sbjct: 536 LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           MVE G + +    + ++SA      +++G+    L    G+  +S     F+++ ++ GD
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGD 655

Query: 124 LNSSECTFSGM-HCADTVSWNTIMSGC 149
           L  +  T   M   AD   W ++++GC
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGC 682


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 220/766 (28%), Positives = 366/766 (47%), Gaps = 70/766 (9%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH--- 135
           I+   +  N LK G+  H   I +G I D  + N  + MY +C  LN +   F  M    
Sbjct: 49  IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRD 108

Query: 136 ----------------------------CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
                                         D VSWN+++SG L N    K +  F +MG 
Sbjct: 109 VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGR 168

Query: 168 SGEQA-DNVSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCG 225
           S E   D  + +  + A + L +   G  +H L +++G Y+D   V   ++L+ MY++C 
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKD---VVTGSALLDMYAKCK 225

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
            ++ + + F  +  K+ V W+AII G   N +     +L  EMQ +  +    +   ++ 
Sbjct: 226 RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKV-GIGVSQSIYASVF 284

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
             CA    L+ G  +H +A++   G D+ +  + +D Y+K  SL+ A+ +FN++ P + L
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSL-PKHSL 343

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
             +N++I G             F+ +L     F+  +L     +C S +    G+ +H  
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSL 403

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            +K    +N    N+++ MY  C  L  A  +   +    D   WN VI A  QNG+ +E
Sbjct: 404 SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERR-DAVSWNAVIAAHEQNGNEEE 462

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
            +  F SM + +   PD  T  +V+ AC + +    G  +H   +KS +GLD+ V  ALI
Sbjct: 463 TLNLFASMLRLR-MEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALI 521

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            MY +C  I+ A  + +      + +WN +I+ F+  K    A   F  +     +P+  
Sbjct: 522 DMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNF 581

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +   +L AC  L  +  GKQIHG +  L    + +I+S L+DMYS C             
Sbjct: 582 TYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKA 641

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K    W++MI  Y  HG G EA+  F  M    +RP  ++ +S+L AC+H G +D+GL
Sbjct: 642 PNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGL 701

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
            Y+N ML EY + P+ EH+ C++D++GRSG++ EA + I+ +P +    +W  +LS C  
Sbjct: 702 HYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKI 761

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           HG+ ++ ++    + +LEPE+    I LSN+Y   G W    E+ K
Sbjct: 762 HGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRK 807



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 199/736 (27%), Positives = 344/736 (46%), Gaps = 53/736 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIR 70
           ++++ Y++      +   FY+T  +DVV+WN+M++  ++N      +  F +M   E + 
Sbjct: 114 TMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVG 173

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD TT  +++ A + +     G  VH L ++ G   D    +  ++MYAKC  L+ S   
Sbjct: 174 FDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKI 233

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS +   + V W+ I++GC+ N+     L  F+EM   G        +S   + A L  L
Sbjct: 234 FSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSAL 293

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G  +HA  +K  +     ++V  + + MY++CG +  A+R F  +    +  +NAII 
Sbjct: 294 KVGTQLHAHALKCDFGSD--ITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIV 351

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G   N K  EA     ++ L   +  +  ++    S CA      +GR +H  +++  L 
Sbjct: 352 GCVRNEKGFEALQFF-QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLR 410

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + NS++D Y K  +LS+A  +F+ +    D VSWN++I+             LF  
Sbjct: 411 SNICVANSILDMYGKCEALSEACCMFDEM-ERRDAVSWNAVIAAHEQNGNEEETLNLFAS 469

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML L  +    T  ++L +C+S ++L  G  IH   +K G   ++    AL+ MY  CG 
Sbjct: 470 MLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGM 529

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  +  RI   +  S WN +I   T   H ++A   F  M  + +  PD+ T   V+
Sbjct: 530 IEEAKKIHDRIEQQTMVS-WNAIIAGFTLLKHSEDAHSFFYEML-KMSVKPDNFTYAIVL 587

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC NL     GK +HG  +K  +  D  + + L+ MY +C +++ ++ VFE   N +  
Sbjct: 588 DACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFV 647

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TWN MI  ++Q+     AL  F  ++ E   PN  + VSIL AC  +G +  G     H 
Sbjct: 648 TWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGL----HY 703

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           F           +A+L  Y        +S MI   G  G+  EA++L  EM      P +
Sbjct: 704 F-----------NAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEM------PFE 746

Query: 656 SSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQ 708
           +  +   +LLS C   G ++   +  N +L+   + PE      ++  +    G  GK+ 
Sbjct: 747 ADAVIWRTLLSICKIHGNIEIAEKATNAILQ---LEPEDSSACILLSNIYADAGMWGKVS 803

Query: 709 EAYEFIKNLPIQPKPG 724
           E  + ++   ++ +PG
Sbjct: 804 EMRKMMRYNKLKKEPG 819



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 294/616 (47%), Gaps = 50/616 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++LL  Y+     + SL +F E   K+ V W+A+I  CV+N   ++GL  F
Sbjct: 206 GFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELF 265

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + GI    +    +  +   ++ LK G  +H  ++K    +D ++    ++MYAKC
Sbjct: 266 KEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKC 325

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F+ +       +N I+ GC+ N    + L +F+ +  SG   + +SLS A 
Sbjct: 326 GSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAF 385

Query: 182 AASACL-GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +A A + G+L  G+ +H+L +K     +  + V NS++ MY +C  +  A   F  M  +
Sbjct: 386 SACASIKGDLD-GRQLHSLSVKSTLRSN--ICVANSILDMYGKCEALSEACCMFDEMERR 442

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWNA+I     NG  EE  +L   M  +R +EPD  T  +++  C+    L  G  +
Sbjct: 443 DAVSWNAVIAAHEQNGNEEETLNLFASMLRLR-MEPDQFTYGSVLKACSSQQALNSGMEI 501

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+  LG D  +  +L+D Y K   + +A+ + + I     +VSWN++I+G      
Sbjct: 502 HNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT-MVSWNAIIAGFTLLKH 560

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F EML +  +    T   +L +C +  S+  GK IH   +KL   ++    + 
Sbjct: 561 SEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG++  +  + ++ + N D   WN +I    Q+G  +EA+  F+ M Q +N  
Sbjct: 621 LVDMYSKCGNMQDSALVFEK-APNKDFVTWNAMICGYAQHGLGEEALGYFERM-QLENVR 678

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  T V+++ AC +  + F  K LH               NA++T YG    I+     
Sbjct: 679 PNHATFVSILRACAH--MGFIDKGLHYF-------------NAMLTEYGLEPQIEH---- 719

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                      ++CMI    ++     AL+L + + FE + +   ++LS C   G +   
Sbjct: 720 -----------YSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIA 768

Query: 589 KQIHGHVFHLGFQENS 604
           ++    +  L  +++S
Sbjct: 769 EKATNAILQLEPEDSS 784



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 137/597 (22%), Positives = 241/597 (40%), Gaps = 103/597 (17%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I T   +I  C+D   L+ G+  H   I      D+ + N LM  Y + + L+ A  +F 
Sbjct: 43  IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102

Query: 338 AIAPMNDLVSWNSMISG--------LFKEMLYLCSQ------------------------ 365
            ++   D++S+N+MISG        L  E  Y   +                        
Sbjct: 103 KMS-QRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSID 161

Query: 366 ------------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
                       F  +T   +L +C+  E    G  +H   +++GF  + +  +AL+ MY
Sbjct: 162 VFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMY 221

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  L  +  +   I    +  CW+ +I  C QN      ++ FK M Q+         
Sbjct: 222 AKCKRLDDSLKIFSEIP-VKNWVCWSAIIAGCVQNDEHILGLELFKEM-QKVGIGVSQSI 279

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
             +V  +C  L     G  LH  ALK   G D  V  A + MY +C  +  A  +F S  
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
             +L  +N +I    +N+    AL+ F+ L       NEIS+    SAC  +     G+Q
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H        + N  +++++LDMY  C               +   +W+++I+A+  +G 
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             E + LF  M    + P + +  S+L ACS    ++ G++ +N +++   +  ++    
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS-GLGLDSFVGG 518

Query: 696 CIVDMLGRSGKLQEA-----------------------------------YEFIKNLPIQ 720
            ++DM  + G ++EA                                   YE +K + ++
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLK-MSVK 577

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDA 776
           P    +  +L AC++     +GKQ+   + KLE  +  Y  S L +MY   G  +D+
Sbjct: 578 PDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDS 634



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 148/365 (40%), Gaps = 57/365 (15%)

Query: 457 TFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           T  ++ Q Q   P  + T  ++I  C +      GK  H   + S    D  + N L+ M
Sbjct: 28  TISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKM 87

Query: 516 YGRCRDIKSASTVFES-------CYNC------------------------NLCTWNCMI 544
           Y RC  +  A  VFE         YN                         ++ +WN M+
Sbjct: 88  YLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSML 147

Query: 545 SAFSQNKAEVRALELF----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           S F QN    +++++F    R  E   ++ +   +L AC+ L     G Q+HG +  +GF
Sbjct: 148 SGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGF 207

Query: 601 QENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHE 645
            ++    SALLDMY+ CK                   WS++I+    + +    +ELF E
Sbjct: 208 YKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKE 267

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   GI  ++S   S+  +C+    +  G Q + + L + D   +       +DM  + G
Sbjct: 268 MQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHAL-KCDFGSDITVGTATLDMYAKCG 326

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY-YISLS 764
            L +A     +LP +     + A++  C  +       Q  +LL K     +G+  ISLS
Sbjct: 327 SLADAQRIFNSLP-KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLK---SGLGFNEISLS 382

Query: 765 NMYVA 769
             + A
Sbjct: 383 GAFSA 387


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 336/617 (54%), Gaps = 43/617 (6%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            + K +HAL +  G   S ++S    L+++Y+  GD+  +   F  +  KDV +WN++I 
Sbjct: 133 PFAKCLHALLVVAGKVQSIFIS--TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMIS 190

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  NG F EA    +++ L+  + PD  T   ++  C     L +GR +H +A +    
Sbjct: 191 AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQ 247

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK------------E 358
           +++ +  SL+  YS+      A  LF+ + P  D+ SWN+MISGL +            E
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDE 306

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     + +F T+++ILP C     +     IH + +K G   +    NAL++MY   G+
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A    Q++   +D   WN +I A  QN     A   F  M Q     PD +TLV++ 
Sbjct: 367 LEDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLA 424

Query: 479 SACGNLELAFEGKSLHGLALKS--LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           S           +S+HG  ++   LM  D  + NA++ MY +   + SA  VFE     +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLME-DVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKD 483

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIH 592
           + +WN +I+ ++QN     A+E+++ +E      PN+ + VSIL A   +G L+ G +IH
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 543

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
           G V       + F+++ L+D+Y  C               +S+  W+++IS +G HG   
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           + ++LF EM + G++P   + +SLLSACSHSG V+EG ++   +++EY ++P  +H+ C+
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRLMQEYGIKPSLKHYGCM 662

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G L+ AY+FIK++P+QP   +WGA+L AC  HG+ ++GK  ++ LF+++ +NV
Sbjct: 663 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722

Query: 758 GYYISLSNMYVALGRWK 774
           GYY+ LSN+Y  +G+W+
Sbjct: 723 GYYVLLSNIYANVGKWE 739



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 248/497 (49%), Gaps = 24/497 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH-FFGEMVEEG 68
           ST L+  Y+N+     S   F +   KDV  WN+MI+A V N      +  F+  ++   
Sbjct: 154 STRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE 213

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           IR D  T   ++ A      L  GR +HC + K G   +  +    ++MY++ G    + 
Sbjct: 214 IRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 270

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D  SWN ++SG + N    + L    EM   G + + V++ S +     LG
Sbjct: 271 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG 330

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++S   +IH   IK G E   +VS  N+LI+MY++ G++E A +AF  M   DVVSWN+I
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVS--NALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           I  +  N     A     +MQL    +PD+ T+V+L S+ A S   +  RSVHG+ +RR 
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQL-NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------- 357
            L  D+++ N+++D Y+K   L  A  +F  I P+ D++SWN++I+G  +          
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFE-IIPVKDVISWNTLITGYAQNGLASEAIEV 506

Query: 358 -EMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            +M+  C +   +  T ++ILP+     +L+ G  IH   +K     +      L+ +Y 
Sbjct: 507 YKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYG 566

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG LV A SL  ++   S  + WN +I     +GH ++ +K F  M   +   PD VT 
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTF 624

Query: 475 VNVISACGNLELAFEGK 491
           V+++SAC +     EGK
Sbjct: 625 VSLLSACSHSGFVEEGK 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 174/634 (27%), Positives = 299/634 (47%), Gaps = 46/634 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L + AG +    +    VN+YA  GD++ S CTF  +   D  +WN+++S  +H
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N +  + +  F ++    E   +      V   AC G L  G+ IH    KLG++ + +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPV-LKAC-GTLVDGRKIHCWAFKLGFQWNVFV 252

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           +   SLI MYS+ G    A   F  M  +D+ SWNA+I G   NG   +A D+L EM+L 
Sbjct: 253 AA--SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL- 309

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             ++ +  TVV+++ +C     +     +H Y I+  L +DL + N+L++ Y+K  +L  
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A   F  +  + D+VSWNS+I+            G F +M     Q    TL+++     
Sbjct: 370 ARKAFQQMF-ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428

Query: 380 SPESLEFGKSIHCWQLKLGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                +  +S+H + ++ G+   +  IG NA++ MY   G L +A  + + I    D   
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIG-NAVVDMYAKLGLLDSAHKVFEIIP-VKDVIS 486

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I    QNG   EAI+ +K M + +   P+  T V+++ A  ++    +G  +HG  
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 546

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K+ + LD  V   LI +YG+C  +  A ++F      +  TWN +IS    +    + L
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LF  +  E   P+ ++ VS+LSAC+                H GF E       L+  Y
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACS----------------HSGFVEEGKWCFRLMQEY 650

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               S   +  M+   G  G    A +   +M    ++P  S   +LL AC   G ++ G
Sbjct: 651 GIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM---PLQPDASIWGALLGACRIHGNIELG 707

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            ++ ++ L E D +    ++V + ++    GK +
Sbjct: 708 -KFASDRLFEVDSK-NVGYYVLLSNIYANVGKWE 739



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 22/467 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  + SL+  YS   +   + +LF +   +D+ +WNAMI+  ++N      L   
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI+ +  T++ I+    Q+  +    ++H   IK G+  D  + N  +NMYAK 
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F  M   D VSWN+I++    N+ P     +F +M  +G Q D ++L S  
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424

Query: 182 AASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           +  A   +    + +H   ++ G+  ED   V + N+++ MY++ G +++A + F  +  
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMED---VVIGNAVVDMYAKLGLLDSAHKVFEIIPV 481

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SWN +I G+A NG   EA ++   M+  + + P+  T V+++   A    L++G  
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMK 541

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
           +HG  I+  L  D+ +   L+D Y K   L  A  LF  + P    V+WN++IS      
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV-PQESSVTWNAIISCHGIHG 600

Query: 354 ------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIG 405
                  LF EML    +    T +++L +C+    +E GK   C++L  + G   +   
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK--WCFRLMQEYGIKPSLKH 658

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              ++ +    G L  A+  ++ +    D S W  ++ AC  +G+ +
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 705



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 186/421 (44%), Gaps = 25/421 (5%)

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +S     F K +H   +  G   +      L+++Y N GD+  +     +I    D   W
Sbjct: 127 DSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYAW 185

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I A   NGHF EAI  F  +       PD  T   V+ ACG L    +G+ +H  A 
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRKIHCWAF 242

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K     +  V  +LI MY R      A ++F+     ++ +WN MIS   QN    +AL+
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +   +  E    N +++VSIL  C QLG +     IH +V   G + + F+S+AL++MY+
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362

Query: 616 N---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
                                +W+S+I+AY  +     A   F +M  +G +P   +++S
Sbjct: 363 KFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVS 422

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           L S  + S         +  ++    +  +      +VDM  + G L  A++  + +P++
Sbjct: 423 LASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK 482

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP--ENVGYYISLSNMYVALGRWKDAVE 778
                W  +++  + +G      +V +++ + +    N G ++S+   Y  +G  +  ++
Sbjct: 483 DVIS-WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMK 541

Query: 779 I 779
           I
Sbjct: 542 I 542


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 225/803 (28%), Positives = 393/803 (48%), Gaps = 50/803 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGIR 70
           +++  Y+     E ++A+F     KDVV+W AM  A   E R     L  F EM+ + + 
Sbjct: 171 AMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPL- 229

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             +  ++  ++AL     L+ G  +H L  +A +  D    N  +NMY KCGD   +   
Sbjct: 230 --APNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSV 287

Query: 131 FSGMHCA---DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           F  M      D VSWN ++S  +        +  FR +   G + ++V+L + + A A  
Sbjct: 288 FKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347

Query: 188 G-ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW 245
           G +    +  H    + GY     V + N++ISMY++CG   AA   F  +  K DV+SW
Sbjct: 348 GVDFGAARGFHGRIWESGYLRD--VVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISW 405

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N ++        F +  +  H M L+  ++P+  + + +++ C++S  L  GR +H   +
Sbjct: 406 NTMLGASEDRKSFGKVVNTFHHM-LLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464

Query: 306 RRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISGLFKEMLYLC 363
            R   Y +  +   L+  Y K  S+S+AEL+F  +  P   LV+WN M+    +      
Sbjct: 465 TRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDR--- 521

Query: 364 SQFSFSTLLAILPSCNSPESLEFGK---SIHCWQ---------LKLGFSNNTIGVNALMH 411
           S+ +F  L+ +L     P++L F     S +C Q         L+ G+ +  +   AL+ 
Sbjct: 522 SKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLE-TALIS 580

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           M+  C +L  A S+   + H  D   W  ++ A  +N  F+E    F+ M Q +   PD 
Sbjct: 581 MHGRCRELEQARSVFNEMDHG-DVVSWTAMVSATAENRDFKEVHNLFRRM-QLEGVIPDK 638

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            TL   +  C        GK +H    +  +  D  V+NAL+ MY  C D + A + FE+
Sbjct: 639 FTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFET 698

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               +L +WN M +A++Q      A+ LFR ++ E   P++++  + L+      ++  G
Sbjct: 699 MKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG 758

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC----------KSNAAWS-----SMISAYGYH 633
           K  H      G   +  +++ L+ +Y+ C          +    W+     ++I A   H
Sbjct: 759 KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQH 818

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   EA+++F +M   G+RP  ++++S++SAC H+G+V+EG   +  M E + + P  EH
Sbjct: 819 GFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEH 878

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C VD+LGR+G+L+ A + I+ +P +    VW ++L  C   GD ++G++ A+ + +L+
Sbjct: 879 YACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELD 938

Query: 754 PENVGYYISLSNMYVALGRWKDA 776
           P N   ++ LSN+Y A G+WKDA
Sbjct: 939 PHNSAAHVVLSNIYCATGKWKDA 961



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 214/804 (26%), Positives = 378/804 (47%), Gaps = 70/804 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   HL     L+  Y      E + A+F +   ++VV+W A+I+A  +          F
Sbjct: 55  GLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALF 114

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS----LCNVFVN 116
             M +E     +S TL+ +++A      L  GR +H +  + G+   S+    + N  +N
Sbjct: 115 RTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMIN 174

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN---YPEKCLLYFREMGWSGEQAD 173
           MYAKCG L  +   F  +   D VSW T M+G        YP+  L  FREM       +
Sbjct: 175 MYAKCGSLEDAIAVFLAIPEKDVVSW-TAMAGAYAQERRFYPD-ALRIFREMLLQPLAPN 232

Query: 174 NVSLSSAVAASACLGELSYGKVIHAL--GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            ++  +A+ A   L +   G  +H+L     LG++  P  S  N+LI+MY +CGD E A 
Sbjct: 233 VITFITALGACTSLRD---GTWLHSLLHEASLGFD--PLAS--NALINMYGKCGDWEGAY 285

Query: 232 RAFWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-SL 287
             F  M  +   D+VSWNA+I      G+  +A  +   ++L   + P+  T++T++ +L
Sbjct: 286 SVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL-EGMRPNSVTLITILNAL 344

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            A  +     R  HG         D+++ N+++  Y+K    S A  +F  I    D++S
Sbjct: 345 AASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVIS 404

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN+M+               F  ML      +  + +AIL +C++ E+L+FG+ IH   L
Sbjct: 405 WNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464

Query: 396 --KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQ 452
             +  +  +++    L+ MY  CG +  A  + + +   S +   WN+++ A  QN   +
Sbjct: 465 TRRRDYVESSVA-TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSK 523

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR-VQNA 511
           EA      M  Q    PD+++  +V+S+C     + E + L    L+S  G  +  ++ A
Sbjct: 524 EAFGALMEML-QGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILES--GYRSACLETA 577

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PN 568
           LI+M+GRCR+++ A +VF    + ++ +W  M+SA ++N+       LFR ++ E   P+
Sbjct: 578 LISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPD 637

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
           + ++ + L  C     L  GK IH  V  +G + +  + +ALL+MYSNC           
Sbjct: 638 KFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFE 697

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               +   +W+ M +AY   G   EA+ LF +M   G++P K +  + L+    S LV +
Sbjct: 698 TMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSD 757

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G + ++ +  E  +  +      +V +  + GKL EA    +         +  A++ A 
Sbjct: 758 G-KLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG-ACDWTVVLLNAIIGAL 815

Query: 734 SHHGDTKMGKQVAELLFKLEPENV 757
           + HG     ++  ++ +K++ E V
Sbjct: 816 AQHG---FSEEAVKMFWKMQQEGV 836



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 197/738 (26%), Positives = 337/738 (45%), Gaps = 66/738 (8%)

Query: 68  GIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
            +R D    L   +AL Q     N L +G+  H L   AG+     L N  +NMY +CG 
Sbjct: 16  AVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGS 75

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVA 182
           L  +   FS M   + VSW  ++S         +    FR M      A N  +L + + 
Sbjct: 76  LEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLN 135

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGDIEAAERAFWGMTCK 240
           A A   +L+ G+ IHA+  +LG E +   +  V N++I+MY++CG +E A   F  +  K
Sbjct: 136 ACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEK 195

Query: 241 DVVSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           DVVSW A+   +A   +F  +A  +  EM L++ + P++ T +T +  C     LR+G  
Sbjct: 196 DVVSWTAMAGAYAQERRFYPDALRIFREM-LLQPLAPNVITFITALGACTS---LRDGTW 251

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN--DLVSWNSMIS---- 353
           +H       LG+D L  N+L++ Y K      A  +F A+A     DLVSWN+MIS    
Sbjct: 252 LHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE 311

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG--KSIHCWQLKLGFSNNT 403
                    +F+ +     + +  TL+ IL +  +   ++FG  +  H    + G+  + 
Sbjct: 312 AGRHGDAMAIFRRLRLEGMRPNSVTLITILNAL-AASGVDFGAARGFHGRIWESGYLRDV 370

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +  NA++ MY  CG   AA+++ +RI    D   WN ++ A      F + + TF  M  
Sbjct: 371 VIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML- 429

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG-LDTRVQNALITMYGRCRDI 522
                P+ V+ + +++AC N E    G+ +H L L      +++ V   L++MYG+C  I
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSI 489

Query: 523 KSASTVFES--CYNCNLCTWNCMISAFSQNKAEVRAL-ELFRHLE--FEPNEISIVSILS 577
             A  VF+     + +L TWN M+ A++QN     A   L   L+    P+ +S  S+LS
Sbjct: 490 SEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 578 AC---TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---------------S 619
           +C    +  VLR        +   G++ ++ + +AL+ M+  C+                
Sbjct: 550 SCYCSQEAQVLRMC------ILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGD 602

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W++M+SA   +    E   LF  M   G+ P K ++ + L  C  S  +  G +  +
Sbjct: 603 VVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG-KVIH 661

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
             + E  +  +      +++M    G  +EA  F + +  +     W  M +A +  G  
Sbjct: 662 ACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVS-WNIMSAAYAQAG-- 718

Query: 740 KMGKQVAELLFKLEPENV 757
            + K+   L  +++ E V
Sbjct: 719 -LAKEAVLLFRQMQLEGV 735



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 6/344 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L++ +      E + ++F E  + DVV+W AM++A  ENR      + F  M  EG+ 
Sbjct: 576 TALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVI 635

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL   +        L  G+V+H    + G+ AD ++ N  +NMY+ CGD   +   
Sbjct: 636 PDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D VSWN + +        ++ +L FR+M   G + D ++ S+ +  S     +
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALV 755

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S GK+ HAL  + G +    VSV   L+ +Y++CG ++ A   F G     VV  NAII 
Sbjct: 756 SDGKLFHALAAESGLDSD--VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIG 813

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             A +G  EEA  +  +MQ    V PD+AT+V++IS C  + ++ EG S     ++   G
Sbjct: 814 ALAQHGFSEEAVKMFWKMQ-QEGVRPDVATLVSIISACGHAGMVEEGCSSF-LTMKEYFG 871

Query: 311 YDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               + +    +D   ++  L  AE +   +   ++ + W S++
Sbjct: 872 ISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 191/419 (45%), Gaps = 40/419 (9%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           A+L SC     L  GK  H      G   +    N L++MY+ CG L  A ++  ++   
Sbjct: 30  ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           +  S W  +I A  Q G F  A   F++M  + +A+P+S TLV +++AC N      G+S
Sbjct: 90  NVVS-WTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 493 LHG----LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +H     L L+      T V NA+I MY +C  ++ A  VF +    ++ +W  M  A++
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYA 208

Query: 549 QNKA-EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG--HVFHLGFQE 602
           Q +     AL +FR +  +   PN I+ ++ L ACT    LR G  +H   H   LGF  
Sbjct: 209 QERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLGF-- 263

Query: 603 NSFISSALLDMYSNC----------KSNA--------AWSSMISAYGYHGKGWEAIELFH 644
           +   S+AL++MY  C          K+ A        +W++MISA    G+  +A+ +F 
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            +   G+RP   ++I++L+A + SG+     + ++  + E     +      I+ M  + 
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKC 383

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE----LLFKLEPENVGY 759
           G    A+   + +  +     W  ML A         GK V      LL  ++P  V +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDR--KSFGKVVNTFHHMLLAGIDPNKVSF 440



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 2/259 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +    +LL  YSN   +  +L+ F     +D+V+WN M  A  +       +  F
Sbjct: 668 GLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLF 727

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG++ D  T    ++       +  G++ H L+ ++G+ +D S+    V +YAKC
Sbjct: 728 RQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKC 787

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F G      V  N I+     + + E+ +  F +M   G + D  +L S +
Sbjct: 788 GKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSII 847

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A    G +  G     L +K  +  SP +      + +  + G +E AE+    M  +D
Sbjct: 848 SACGHAGMVEEG-CSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFED 906

Query: 242 -VVSWNAIIDGFALNGKFE 259
             + W +++    L G  E
Sbjct: 907 NTLVWTSLLGTCKLQGDAE 925


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 213/663 (32%), Positives = 356/663 (53%), Gaps = 51/663 (7%)

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N+Y E   +++R +      A N  L+   A SA L EL  GK+IH   + LG +++  +
Sbjct: 181 NHYTEGEGIWYRVL------ARNRCLARVTAGSA-LEEL-LGKLIHQKIVSLGLQNN--I 230

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           ++  SLI++Y  C   ++A+  F  +    D+  WN ++     N  F E  ++ H +  
Sbjct: 231 TLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLH 290

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              ++PD  T  +++  C+    +  G+ VH + I+     D+++M+S +  Y+K N   
Sbjct: 291 FPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFE 350

Query: 331 KAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSC 378
            A  LF+ + P  D+ SWN++IS             LF+EM     +    TL  ++ SC
Sbjct: 351 DAIKLFDEM-PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 409

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                LE GK IH   ++ GF+ +    +AL+ MY  CG L  A  + ++I   +  S W
Sbjct: 410 ARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS-W 468

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSLHG 495
           N +I   +  G  +  I+ F+ M  ++   P   TL +++ AC    NL+L   GK +HG
Sbjct: 469 NSMIAGYSLKGDSKSCIELFRRM-DEEGIRPTLTTLSSILMACSRSVNLQL---GKFIHG 524

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +++ +  D  V ++LI +Y +C +I SA  VF++    N+ +WN MIS + +  + + 
Sbjct: 525 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 584

Query: 556 ALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL +F   R    +P+ I+  S+L AC+QL VL  GK+IH  +     + N  +  ALLD
Sbjct: 585 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 644

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+ C               +   +W+SMI+AYG HG+ +EA++LF +M  S  +P K +
Sbjct: 645 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 704

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +++LSACSH+GLVDEG  Y+N M+ EY  +P  EH+ C++D+LGR G+L+EAYE ++  
Sbjct: 705 FLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRT 764

Query: 718 P-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           P I+   G+   + SAC  H    +G+Q+  LL + +P++   YI LSNMY ++ +W + 
Sbjct: 765 PDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEV 824

Query: 777 VEI 779
            ++
Sbjct: 825 RKV 827



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 167/555 (30%), Positives = 279/555 (50%), Gaps = 40/555 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVE-EGI 69
           SL+  Y +   F+S+  +F    N  D+  WN ++ AC +N   + GL  F  ++    +
Sbjct: 235 SLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYL 294

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D+ T   ++ A + +  +  G++VH   IK+G   D  + +  V MYAKC     +  
Sbjct: 295 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIK 354

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D  SWN ++S    +  PEK L  F EM  SG + D+V+L++ +++ A L +
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK IH   ++ G+    +VS  ++L+ MY +CG +E A+  F  +  K+VVSWN++I
Sbjct: 415 LERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMI 472

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G++L G  +   +L   M     + P + T+ +++  C+ S+ L+ G+ +HGY IR  +
Sbjct: 473 AGYSLKGDSKSCIELFRRMD-EEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 531

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
             D+ + +SL+D Y K  ++  AE +F  + P  ++VSWN MISG  K   YL +   F+
Sbjct: 532 EADIFVNSSLIDLYFKCGNIGSAENVFQNM-PKTNVVSWNVMISGYVKVGSYLEALVIFT 590

Query: 370 ------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       T  ++LP+C+    LE GK IH + ++     N + + AL+ MY  CG
Sbjct: 591 DMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 650

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  +  ++    D   W  +I A   +G   EA+K F+ M QQ +A PD VT + +
Sbjct: 651 AVDEALHIFNQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKM-QQSDAKPDKVTFLAI 708

Query: 478 ISACGN---------------LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           +SAC +                E  F+    H   L  L+G   R++ A   +  R  DI
Sbjct: 709 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAY-EILQRTPDI 767

Query: 523 KSA----STVFESCY 533
           +      ST+F +C+
Sbjct: 768 REDVGLLSTLFSACH 782



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 174/653 (26%), Positives = 316/653 (48%), Gaps = 45/653 (6%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCL 150
           G+++H   +  G+  + +LC   +N+Y  C    S++  F  +    D   WN +M+ C 
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273

Query: 151 HNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
            N  + E   ++ R + +   + D  +  S + A + LG + YGK++H   IK G+    
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD- 332

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            V V +S + MY++C   E A + F  M  +DV SWN +I  +  +G+ E+A +L  EM+
Sbjct: 333 -VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +    +PD  T+ T+IS CA  L L  G+ +H   +R     D  + ++L+D Y K   L
Sbjct: 392 V-SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A+ +F  I   N +VSWNSMI+G            LF+ M     + + +TL +IL +
Sbjct: 451 EMAKEVFEQIQRKN-VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMA 509

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C+   +L+ GK IH + ++     +    ++L+ +Y  CG++ +A ++ Q +   +  S 
Sbjct: 510 CSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS- 568

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN++I    + G + EA+  F  M ++    PD++T  +V+ AC  L +  +GK +H   
Sbjct: 569 WNVMISGYVKVGSYLEALVIFTDM-RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 627

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           ++S + ++  V  AL+ MY +C  +  A  +F      +  +W  MI+A+  +     AL
Sbjct: 628 IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEAL 687

Query: 558 ELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LF  ++    +P++++ ++ILSAC+  G++  G                +  + ++  Y
Sbjct: 688 KLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG---------------CYYFNQMIAEY 732

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               +   +S +I   G  G+  EA E+        IR     + +L SAC     +D G
Sbjct: 733 GFKPAVEHYSCLIDLLGRVGRLREAYEILQR--TPDIREDVGLLSTLFSACHLHKKLDLG 790

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPG 724
            Q    ++E+    P T  ++ + +M     K  E  +    IK L ++  PG
Sbjct: 791 EQIGRLLIEKDPDDPST--YIILSNMYASVKKWDEVRKVRLKIKELGLKKNPG 841



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 26/462 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   +S +  Y+  + FE ++ LF E   +DV +WN +I+   ++      L  F
Sbjct: 328 GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELF 387

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G + DS TL  ++S+  ++  L++G+ +H   +++G   D  + +  V+MY KC
Sbjct: 388 EEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC 447

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F  +   + VSWN++++G       + C+  FR M   G +    +LSS +
Sbjct: 448 GCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSIL 507

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  GK IH   I+   E   +V+  +SLI +Y +CG+I +AE  F  M   +
Sbjct: 508 MACSRSVNLQLGKFIHGYIIRNRVEADIFVN--SSLIDLYFKCGNIGSAENVFQNMPKTN 565

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G+   G + EA  +  +M+    V+PD  T  +++  C+   +L +G+ +H
Sbjct: 566 VVSWNVMISGYVKVGSYLEALVIFTDMR-KAGVKPDAITFTSVLPACSQLAVLEKGKEIH 624

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + I   L  + ++M +L+D Y+K  ++ +A  +FN + P  D VSW SMI+        
Sbjct: 625 NFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL-PERDFVSWTSMIAAYGSHGQA 683

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-----KLGFSNNTI 404
                LF++M    ++    T LAIL +C+    ++ G    C+       + GF     
Sbjct: 684 FEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG----CYYFNQMIAEYGFKPAVE 739

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVAC 445
             + L+ +    G L  A+ +LQR      D    + +  AC
Sbjct: 740 HYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSAC 781


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 213/727 (29%), Positives = 371/727 (51%), Gaps = 50/727 (6%)

Query: 87  NCLKQGRVVHCLSIKAGMIA------DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           N L+   +  C  I + ++       D  L N  ++ Y+K   +N +   F  M   + V
Sbjct: 47  NLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLV 106

Query: 141 SWNTIMSGCLHNNY-PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           +W++++S   H+++  E  +L+ + M    E+ +   L+S V A    G L+    IH L
Sbjct: 107 TWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGL 166

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            +K GY    YV    SLI  Y++   I+ A   F G+  K   +W  II G++  G+ +
Sbjct: 167 VVKGGYVQDVYV--CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQ 224

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
            +  L  +M+    V PD   + +++S C     L  G+ +H Y +R  +  D+ M+N  
Sbjct: 225 VSLKLFDQMK-EGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGF 283

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +DFY K + +     LF+ +   N +VSW ++I+G            LF EM  +     
Sbjct: 284 IDFYFKCHKVQLGRKLFDRMVDKN-VVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPD 342

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA---FS 424
                ++L SC S  +LE G+ +H + +K+   N+    N L+ MY  C  L  A   F+
Sbjct: 343 AFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFN 402

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           L+  I    D   +N +I   ++     EA+  F+ M +   +SP  +  V+++    +L
Sbjct: 403 LMAAI----DLVSYNAMIEGYSRQDKLCEALDLFREM-RLSLSSPTLLIFVSLLGVSASL 457

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                   +HGL +K  + LD    +ALI +Y +C  +  A  VFE   + ++  W  M 
Sbjct: 458 YHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMF 517

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S ++Q      +L+L++ L+    +PNE +  ++++A + +  LRHG+Q H  V  +GF 
Sbjct: 518 SGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFD 577

Query: 602 ENSFISSALLDMY---------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           ++ F+++ L+DMY               +N K  A W+SMI+ Y  HG+  +A+++F +M
Sbjct: 578 DDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDM 637

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
              G++P   + + +LSACSH+GL+D G  ++++M  ++ + P  EH+VC+V +LGR+GK
Sbjct: 638 IMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGK 696

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L EA EFI+ +PI+    VW ++LSAC   G+ ++G   AE+     P + G Y+ LSN+
Sbjct: 697 LYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNI 756

Query: 767 YVALGRW 773
           + + G W
Sbjct: 757 FASKGMW 763



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 193/682 (28%), Positives = 310/682 (45%), Gaps = 47/682 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GIR 70
           +LL AYS ++    +  LF    +K++VTW++M++    +   +  L  F + +     +
Sbjct: 79  TLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEK 138

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +   L  +V A TQ   L     +H L +K G + D  +C   ++ Y K   ++ +   
Sbjct: 139 PNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLL 198

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+    + +W TI++G       +  L  F +M       D   LSS ++A   L  L
Sbjct: 199 FDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFL 258

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   ++ G      VS+ N  I  Y +C  ++   + F  M  K+VVSW  +I 
Sbjct: 259 EGGKQIHCYVLRSGIVMD--VSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIA 316

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G   N    +A DL  EM  M    PD     ++++ C   + L +GR VH YAI+  + 
Sbjct: 317 GCMQNSFHRDALDLFVEMARM-GWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNID 375

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D  + N L+D Y+K +SL+ A  +FN +A + DLVS+N+MI G            LF+E
Sbjct: 376 NDDFVKNGLIDMYAKCDSLTDARKVFNLMAAI-DLVSYNAMIEGYSRQDKLCEALDLFRE 434

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M    S  +    +++L    S   LE    IH   +K G S +    +AL+ +Y  C  
Sbjct: 435 MRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR 494

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  + + I  + D   W  +    TQ    +E++K +K + Q     P+  T   VI
Sbjct: 495 VGDARLVFEEI-QDKDIVVWTAMFSGYTQQSENEESLKLYKCL-QMSRLKPNEFTFAAVI 552

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +A  N+     G+  H   +K     D  V N L+ MY +   I+ A   F S    +  
Sbjct: 553 TAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTA 612

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN MI+ ++Q+    +AL++F  +  E   PN ++ V +LSAC+  G+L          
Sbjct: 613 CWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLL---------- 662

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
             LGF  + F S +   +    +    +  M+S  G  GK +EA E   +M      P K
Sbjct: 663 -DLGF--DHFDSMSQFGIEPGIEH---YVCMVSLLGRAGKLYEAKEFIEKM------PIK 710

Query: 656 SSVI---SLLSACSHSGLVDEG 674
            + +   SLLSAC  SG V+ G
Sbjct: 711 QAAVVWRSLLSACRVSGNVELG 732



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 247/504 (49%), Gaps = 23/504 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G++  +   TSL+  Y+  +  + +  LF     K   TW  +I    +     + L  F
Sbjct: 171 GYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLF 230

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   L  ++SA   +  L+ G+ +HC  +++G++ D S+ N F++ Y KC
Sbjct: 231 DQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKC 290

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +      F  M   + VSW T+++GC+ N++    L  F EM   G   D    +S +
Sbjct: 291 HKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVL 350

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  G+ +HA  IK+  ++  +V   N LI MY++C  +  A + F  M   D
Sbjct: 351 NSCGSLVALEKGRQVHAYAIKVNIDNDDFVK--NGLIDMYAKCDSLTDARKVFNLMAAID 408

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VS+NA+I+G++   K  EA DL  EM+L  S  P +   V+L+ + A    L     +H
Sbjct: 409 LVSYNAMIEGYSRQDKLCEALDLFREMRLSLS-SPTLLIFVSLLGVSASLYHLELSNQIH 467

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--- 358
           G  I+  +  D    ++L+D YSK + +  A L+F  I    D+V W +M SG  ++   
Sbjct: 468 GLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQD-KDIVVWTAMFSGYTQQSEN 526

Query: 359 ----MLYLCSQFSF-----STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LY C Q S       T  A++ + ++  SL  G+  H   +K+GF ++    N L
Sbjct: 527 EESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTL 586

Query: 410 MHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           + MY   G +  A      IS N  DT+CWN +I    Q+G  ++A++ F+ M   +   
Sbjct: 587 VDMYAKSGSIEEAHKAF--ISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMI-MEGLK 643

Query: 469 PDSVTLVNVISAC---GNLELAFE 489
           P+ VT V V+SAC   G L+L F+
Sbjct: 644 PNYVTFVGVLSACSHTGLLDLGFD 667


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 197/616 (31%), Positives = 334/616 (54%), Gaps = 41/616 (6%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            + K +HAL +  G   S ++S    L+++Y+  GD+  +   F  +  KDV +WN++I 
Sbjct: 133 PFAKCLHALLVVAGKVQSIFIS--TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMIS 190

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  NG F EA    +++ L+  + PD  T   ++  C     L +GR +H +A +    
Sbjct: 191 AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRRIHCWAFKLGFQ 247

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK------------E 358
           +++ +  SL+  YS+      A  LF+ + P  D+ SWN+MISGL +            E
Sbjct: 248 WNVFVAASLIHMYSRFGFTGIARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDE 306

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     + +F T+++ILP C     +     IH + +K G   +    NAL++MY   G+
Sbjct: 307 MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGN 366

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A    Q++   +D   WN +I A  QN     A   F  M Q     PD +TLV++ 
Sbjct: 367 LEDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKM-QLNGFQPDLLTLVSLA 424

Query: 479 SACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           S           +S+HG  ++   +  D  + NA++ MY +   + SA  VFE     ++
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHG 593
            +WN +I+ ++QN     A+E+++ +E      PN+ + VSIL A   +G L+ G +IHG
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            V       + F+++ L+D+Y  C               +S+  W+++IS +G HG   +
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
            ++LF EM + G++P   + +SLLSACSHSG V+EG ++   +++EY ++P  +H+ C+V
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRLMQEYGIKPSLKHYGCMV 663

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR+G L+ AY FIK++P+QP   +WGA+L AC  HG+ ++GK  ++ LF+++ +NVG
Sbjct: 664 DLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVG 723

Query: 759 YYISLSNMYVALGRWK 774
           YY+ LSN+Y  +G+W+
Sbjct: 724 YYVLLSNIYANVGKWE 739



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 248/497 (49%), Gaps = 24/497 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH-FFGEMVEEG 68
           ST L+  Y+N+     S   F +   KDV TWN+MI+A V N      +  F+  ++   
Sbjct: 154 STRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSE 213

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           IR D  T   ++ A      L  GR +HC + K G   +  +    ++MY++ G    + 
Sbjct: 214 IRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 270

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D  SWN ++SG + N    + L    EM   G + + V++ S +     LG
Sbjct: 271 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLG 330

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++S   +IH   IK G E   +VS  N+LI+MY++ G++E A +AF  M   DVVSWN+I
Sbjct: 331 DISTAMLIHLYVIKHGLEFDLFVS--NALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           I  +  N     A     +MQL    +PD+ T+V+L S+ A S   +  RSVHG+ +RR 
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQL-NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------- 357
            L  D+++ N+++D Y+K   L  A  +F  I  + D++SWN++I+G  +          
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIL-VKDVISWNTLITGYAQNGLASEAIEV 506

Query: 358 -EMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            +M+  C +   +  T ++ILP+     +L+ G  IH   +K     +      L+ +Y 
Sbjct: 507 YKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYG 566

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG LV A SL  ++   S  + WN +I     +GH ++ +K F  M   +   PD VT 
Sbjct: 567 KCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTF 624

Query: 475 VNVISACGNLELAFEGK 491
           V+++SAC +     EGK
Sbjct: 625 VSLLSACSHSGFVEEGK 641



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 256/515 (49%), Gaps = 25/515 (4%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L + AG +    +    VN+YA  GD++ S CTF  +   D  +WN+++S  +H
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N +  + +  F ++    E   +      V   AC G L  G+ IH    KLG++ + +V
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPV-LKAC-GTLVDGRRIHCWAFKLGFQWNVFV 252

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           +   SLI MYS+ G    A   F  M  +D+ SWNA+I G   NG   +A D+L EM+L 
Sbjct: 253 AA--SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL- 309

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             ++ +  TVV+++ +C     +     +H Y I+  L +DL + N+L++ Y+K  +L  
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A   F  +  + D+VSWNS+I+            G F +M     Q    TL+++     
Sbjct: 370 ARKAFQQMF-ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428

Query: 380 SPESLEFGKSIHCWQLKLGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                +  +S+H + ++ G+   +  IG NA++ MY   G L +A  + + I    D   
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIG-NAVVDMYAKLGLLDSAHKVFE-IILVKDVIS 486

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I    QNG   EAI+ +K M + +   P+  T V+++ A  ++    +G  +HG  
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K+ + LD  V   LI +YG+C  +  A ++F      +  TWN +IS    +    + L
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
           +LF  +  E   P+ ++ VS+LSAC+  G +  GK
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 22/467 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  + SL+  YS   +   + +LF +   +D+ +WNAMI+  ++N      L   
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI+ +  T++ I+    Q+  +    ++H   IK G+  D  + N  +NMYAK 
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F  M   D VSWN+I++    N+ P     +F +M  +G Q D ++L S  
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424

Query: 182 AASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           +  A   +    + +H   ++ G+  ED   V + N+++ MY++ G +++A + F  +  
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMED---VVIGNAVVDMYAKLGLLDSAHKVFEIILV 481

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SWN +I G+A NG   EA ++   M+  + + P+  T V+++   A    L++G  
Sbjct: 482 KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMR 541

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
           +HG  I+  L  D+ +   L+D Y K   L  A  LF  + P    V+WN++IS      
Sbjct: 542 IHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV-PQESSVTWNAIISCHGIHG 600

Query: 354 ------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIG 405
                  LF EML    +    T +++L +C+    +E GK   C++L  + G   +   
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK--WCFRLMQEYGIKPSLKH 658

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              ++ +    G L  A+  ++ +    D S W  ++ AC  +G+ +
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIE 705



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 184/421 (43%), Gaps = 25/421 (5%)

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +S     F K +H   +  G   +      L+++Y N GD+  +     +I    D   W
Sbjct: 127 DSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYTW 185

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I A   NGHF EAI  F  +       PD  T   V+ ACG L    +G+ +H  A 
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRRIHCWAF 242

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K     +  V  +LI MY R      A ++F+     ++ +WN MIS   QN    +AL+
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +   +  E    N +++VSIL  C QLG +     IH +V   G + + F+S+AL++MY+
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA 362

Query: 616 N---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
                                +W+S+I+AY  +     A   F +M  +G +P   +++S
Sbjct: 363 KFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVS 422

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           L S  + S         +  ++    +  +      +VDM  + G L  A++  + + ++
Sbjct: 423 LASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK 482

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP--ENVGYYISLSNMYVALGRWKDAVE 778
                W  +++  + +G      +V +++ + +    N G ++S+   Y  +G  +  + 
Sbjct: 483 DVIS-WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMR 541

Query: 779 I 779
           I
Sbjct: 542 I 542


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 200/641 (31%), Positives = 335/641 (52%), Gaps = 36/641 (5%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G   D  +    +     L  +  GKVI  + +++G++   +V+  +SLI +Y+  G IE
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVA--SSLIKLYADNGCIE 62

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A R F  M  KD V WN +I+G+   G+ + A  L  +M +    +PD  T   ++S+ 
Sbjct: 63  DARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDM-MSSEAKPDSVTFACVLSIS 121

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
               ++  GR +HG  +R  L +  L+ N+L+  YSK   L  A  LF+ + P  DLV W
Sbjct: 122 CSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMM-PQIDLVVW 180

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N MI G            LF EM+    +    T  + LPS     SL+  K IH + ++
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            G   +    +AL+ +Y  C D V A  +   +S   D   +  +I     NG  ++A++
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISGYVLNGMNKDALE 299

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F+ + Q++   P+++T  +++ AC  L     G+ LHG  +K+ +     V +A++ MY
Sbjct: 300 IFRWLLQKK-MIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMY 358

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI- 575
            +C  +  A  +F      +   WN +I++FSQ+     A+ LFR +  E  +   V++ 
Sbjct: 359 AKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVS 418

Query: 576 --LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
             LSAC  +  L +GK+IHG +    F+ + F  SAL++MY+ C               K
Sbjct: 419 AALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEK 478

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +  AW+S+I+AYGYHG   +++ LFH M   GI+P   + +++LS+C H+G V++G++Y+
Sbjct: 479 NEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYF 538

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
             M EEY +  + EH+ C+ D+ GR+G L EA+E I ++P  P   VWG +L AC  HG+
Sbjct: 539 RCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGN 598

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++ +  +  L  LEP+N GYY+ L+++    G+W+   +I
Sbjct: 599 VELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKI 639



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 174/676 (25%), Positives = 316/676 (46%), Gaps = 46/676 (6%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+  D  T   ++   T +N ++ G+V+  + ++ G   D  + +  + +YA  G +  +
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D V WN +++G +     +  +  F++M  S  + D+V+ +  ++ S   
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             + YG+ +H L ++ G +  P V   N+L+++YS+   +  A + F  M   D+V WN 
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVG--NTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNR 182

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  NG  ++A  L +EM +   ++PD  T  + +   A+S  L++ + +HGY +R 
Sbjct: 183 MIGGYVQNGFMDDASMLFNEM-ISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  D+ + ++L+D Y K      A  +FN ++   D+V + +MISG            +
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISGYVLNGMNKDALEI 300

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F+ +L      +  T  +ILP+C    +++ G+ +H + +K          +A+M+MY  
Sbjct: 301 FRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAK 360

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L  A  +  RIS   D  CWN +I + +Q+G  +EAI  F+ M   +    D VT+ 
Sbjct: 361 CGRLDLAHLIFGRISIK-DAICWNSIITSFSQDGKPEEAIYLFRQMG-MEGVKYDCVTVS 418

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
             +SAC N+     GK +HG  +K     D    +ALI MY +C  +  A  VF      
Sbjct: 419 AALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEK 478

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           N   WN +I+A+  +     +L LF ++     +P+ I+ ++ILS+C       H  Q+ 
Sbjct: 479 NEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCG------HAGQVE 532

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
             V +       +   A ++ Y         + M   +G  G   EA E+   M      
Sbjct: 533 DGVRYFRCMTEEYGIPAQMEHY---------ACMADLFGRAGHLDEAFEVITSM---PFP 580

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAY 711
           P  S   +LL AC   G V+        +L   D+ P+   +++ +  +L  +GK +  +
Sbjct: 581 PAASVWGTLLGACRVHGNVELAEVASRYLL---DLEPKNSGYYLLLTHVLADAGKWRSVH 637

Query: 712 E---FIKNLPIQPKPG 724
           +    +K   +Q  PG
Sbjct: 638 KIQHLMKERGVQKVPG 653



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 248/497 (49%), Gaps = 24/497 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  ++SL+  Y++    E +   F +  +KD V WN MI   V+       +  F
Sbjct: 40  GFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLF 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+    + DS T   ++S       ++ GR +H L +++G+     + N  V +Y+K 
Sbjct: 100 KDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKG 159

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  M   D V WN ++ G + N + +   + F EM  +G + D+++ +S +
Sbjct: 160 RQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFL 219

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A    L   K IH   ++ G     Y++  ++LI +Y +C D   A + F   T  D
Sbjct: 220 PSLAESSSLKQIKEIHGYIVRHGVILDVYLN--SALIDLYFKCRDAVMACKMFNLSTKFD 277

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V + A+I G+ LNG  ++A ++   + L + + P+  T  +++  CA    ++ GR +H
Sbjct: 278 IVIYTAMISGYVLNGMNKDALEIFRWL-LQKKMIPNALTFSSILPACAGLAAIKLGRELH 336

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           GY I+  L     + +++M+ Y+K   L  A L+F  I+ + D + WNS+I+     G  
Sbjct: 337 GYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRIS-IKDAICWNSIITSFSQDGKP 395

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +E +YL  Q           T+ A L +C +  +L +GK IH + +K  F ++   ++AL
Sbjct: 396 EEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455

Query: 410 MHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           ++MY  CG L  A   F+L+Q      +   WN +I A   +G+  +++  F +M  ++ 
Sbjct: 456 INMYAKCGKLNIARLVFNLMQE----KNEVAWNSIIAAYGYHGYLADSLALFHNML-EEG 510

Query: 467 ASPDSVTLVNVISACGN 483
             PD +T + ++S+CG+
Sbjct: 511 IQPDHITFLTILSSCGH 527



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 142/269 (52%), Gaps = 3/269 (1%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F  +   D+V + AMI+  V N      L  F  ++++ +  ++ T   I+ A   +  
Sbjct: 269 MFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAA 328

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           +K GR +H   IK  +     + +  +NMYAKCG L+ +   F  +   D + WN+I++ 
Sbjct: 329 IKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITS 388

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              +  PE+ +  FR+MG  G + D V++S+A++A A +  L YGK IH   IK  +E  
Sbjct: 389 FSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESD 448

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +    ++LI+MY++CG +  A   F  M  K+ V+WN+II  +  +G   ++  L H M
Sbjct: 449 LF--DMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNM 506

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREG 297
            L   ++PD  T +T++S C  +  + +G
Sbjct: 507 -LEEGIQPDHITFLTILSSCGHAGQVEDG 534


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 224/716 (31%), Positives = 368/716 (51%), Gaps = 40/716 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+   ++H   +  G+  D       +  Y++ G L SS+  F      D+  W  ++  
Sbjct: 14  LRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKC 73

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + +N+  + +  + +M +      +   SS + A A  G L  G+ +H   IK G  D 
Sbjct: 74  HVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGL-DV 132

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V V  SL+ MY   G +  A++ F  MT +D+VSW++II  +  NG+  E  ++   +
Sbjct: 133 DHV-VETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMF-RL 190

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            + + VE D  T++++   C +   LR  +SVHG  IR+ +     + ++L+  YS+ + 
Sbjct: 191 LVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDD 250

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
            S AE +F+ +     + SW +MIS             +F EML      +  T++A+L 
Sbjct: 251 FSSAERIFSNMFN-RSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLS 309

Query: 377 SCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           SC     L  GKS+HC+ +K +   ++++G  AL+  Y   G L     +L  I   +  
Sbjct: 310 SCAGFNLLREGKSVHCYAVKHIDLDDDSLG-PALIEYYAQFGKLSYCEKVLHTIGKRNII 368

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S WN++I      G F+EA+  F  M Q+Q   PDS +L + ISAC N+ L + G  +HG
Sbjct: 369 S-WNMLISVYASQGLFKEALGIFVQM-QRQGQIPDSFSLSSSISACANVGLLWLGHQIHG 426

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            A+K  + LD  VQN+LI MY +C  +  A  +F+   + ++  WN MI  FSQ    + 
Sbjct: 427 YAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLE 485

Query: 556 ALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A+ LF  +     + NE++ ++ + AC+ +G L  GK +H  +   G +++ FI +AL+D
Sbjct: 486 AIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALID 545

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+ C               +S  +WS+MI   G HG    AI LF EM    ++P   +
Sbjct: 546 MYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDIT 605

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +++LSACSHSG V+EG  Y+N+M + ++V P  EH  C+VD+L R+G L EAY  I ++
Sbjct: 606 FMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSM 664

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           P   +  +WGA+L+ C  H    M + +   L  +  ++ GYY  LSN+Y   G W
Sbjct: 665 PFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNW 720



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 175/602 (29%), Positives = 287/602 (47%), Gaps = 23/602 (3%)

Query: 4   LAHLP-TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L H P  ST L+ +YS +   +SS  +F    N D   W  +I   V +      +  + 
Sbjct: 29  LHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYN 88

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M+ + I         ++ A      L  G  VH   IK G+  D  +    + MY   G
Sbjct: 89  KMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLG 148

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L++++  F  M   D VSW++I+S  + N    + L  FR +     + D+V++ S   
Sbjct: 149 CLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAG 208

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A   LG L   K +H   I+   E      + ++L+ MYS+C D  +AER F  M  + +
Sbjct: 209 ACGELGFLRLAKSVHGCIIRQRIETRG--PLNDALVLMYSRCDDFSSAERIFSNMFNRSI 266

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
            SW A+I  +  +  F++A  +  EM L   V P+  T++ ++S CA   LLREG+SVH 
Sbjct: 267 ASWTAMISCYNRSRWFKQALQVFVEM-LEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHC 325

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFK 357
           YA++ +   D  +  +L+++Y++   LS  E + + I   N ++SWN +IS     GLFK
Sbjct: 326 YAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRN-IISWNMLISVYASQGLFK 384

Query: 358 EMLYLCSQFSFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           E L +  Q      +         + +C +   L  G  IH + +K    +  +  N+L+
Sbjct: 385 EALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQ-NSLI 443

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG +  A+ +  RI   S    WN +I   +Q G+  EAI+ F  M        +
Sbjct: 444 DMYSKCGHVDLAYLIFDRIQSKS-VVAWNSMICGFSQIGNSLEAIRLFDQMY-LNCLDMN 501

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            VT +  I AC ++    +GK LH   +   +  D  +  ALI MY +C D++ A  VF+
Sbjct: 502 EVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFD 561

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
           S    ++ +W+ MI     +     A+ LF  +   E +PN+I+ ++ILSAC+  G +  
Sbjct: 562 SMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEE 621

Query: 588 GK 589
           GK
Sbjct: 622 GK 623



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 259/557 (46%), Gaps = 29/557 (5%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P + +L+  YS    F S+  +F    N+ + +W AMI+    +R     L  F EM+E 
Sbjct: 236 PLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEF 295

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +  ++ T++ ++S+    N L++G+ VHC ++K   + D SL    +  YA+ G L+  
Sbjct: 296 KVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYC 355

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E     +   + +SWN ++S        ++ L  F +M   G+  D+ SLSS+++A A +
Sbjct: 356 EKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANV 415

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  G  IH   IK    D     V NSLI MYS+CG ++ A   F  +  K VV+WN+
Sbjct: 416 GLLWLGHQIHGYAIKRHILDE---FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNS 472

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I GF+  G   EA  L  +M L   ++ +  T +T I  C+    L +G+ +H   I  
Sbjct: 473 MICGFSQIGNSLEAIRLFDQMYL-NCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAY 531

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  DL +  +L+D Y+K   L  A  +F++++    +VSW++MI G            L
Sbjct: 532 GVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSE-RSVVSWSAMIGGCGMHGDIDAAISL 590

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F EM+    + +  T + IL +C+    +E GK             N      ++ +   
Sbjct: 591 FAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSR 650

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            GDL  A+ ++  +   ++ S W  ++  C  +          + +   +       TL+
Sbjct: 651 AGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLL 710

Query: 476 -NVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYG-------RCRDIKSAS 526
            N+ +  GN +++ + +S + G+ LK + G  T   +  +  +G       + ++I +  
Sbjct: 711 SNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSHWQVKEINTFL 770

Query: 527 TVFESCYN---CNLCTW 540
             F+S  +   CN+  W
Sbjct: 771 ENFQSLASEQACNVSCW 787


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 204/614 (33%), Positives = 322/614 (52%), Gaps = 39/614 (6%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           HA  +  G+ +   +S+   L    S  G I  A   F  +   DV  +N ++ GF++N 
Sbjct: 40  HAQIVLHGFRND--ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
               +  +   ++    ++P+ +T    IS  +     R G  +HG AI      +LL+ 
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------C 363
           ++++  Y K   +  A  +F+ + P  D + WN+MISG  K  +Y+             C
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRM-PEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           ++   +TLL ILP+    + L  G  IH    K G  ++   +   + +Y  CG +  A 
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAS 276

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           +L +      D   +N +I   T NG  + ++  FK +     A   S TLV+++   G+
Sbjct: 277 TLFREF-RRPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGAKLKSSTLVSLVPVSGH 334

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L L +   ++HG +LKS     T V  AL T+Y +  +I+SA  +F+     +L +WN M
Sbjct: 335 LMLIY---AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS ++QN     A+ LFR +   EF PN ++I  ILSAC QLG L  GK +H  V    F
Sbjct: 392 ISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           + + ++S+AL+ MY+ C               K+   W++MIS YG HG G EA+ +F E
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSE 511

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M NSGI PT  + + +L ACSH+GLV EG + +N+M+  Y   P  +H+ C+VD+LGR+G
Sbjct: 512 MLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAG 571

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            LQ A +FI+ +PIQP P VW  +L AC  H DT + + V+E LF+L+P+NVGY++ LSN
Sbjct: 572 HLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631

Query: 766 MYVALGRWKDAVEI 779
           ++ A   +  A  +
Sbjct: 632 IHSADRNYPQAATV 645



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 153/594 (25%), Positives = 257/594 (43%), Gaps = 57/594 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   T L    S++     +  +F      DV  +N ++     N      L  F
Sbjct: 47  GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVF 106

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             + +   ++ +S+T    +SA +     + G V+H  +I  G  ++  L +  V MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFK 166

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
              +  +   F  M   DT+ WNT++SG   N    + +  FR++   S  + D  +L  
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A L EL  G  IH+L  K G     Y  V    IS+YS+CG I+ A   F     
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDY--VLTGFISLYSKCGKIKMASTLFREFRR 284

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D+V++NA+I G+  NG+ E +  L  E+ ++   +   +T+V+L+ +    +L+    +
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGAKLKSSTLVSLVPVSGHLMLI---YA 340

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY+++        +  +L   YSK N +  A  LF+  +P   L SWN+MISG     
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWNAMISGYTQNG 399

Query: 355 -------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                  LF+EM    S+FS +  T+  IL +C    +L  GK +H       F ++   
Sbjct: 400 LTEDAISLFREM--QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+ MY  CG +  A  L   +   ++ + WN +I     +GH QEA+  F  M    
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVT-WNTMISGYGLHGHGQEALTIFSEML-NS 515

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             +P  VT + V+ AC +  L  EG  +                N++I  YG        
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLVKEGDEIF---------------NSMIHRYG-------- 552

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                  +  ++  + C++    +     RAL+    +  +P      ++L AC
Sbjct: 553 -------FEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGAC 599


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 223/754 (29%), Positives = 363/754 (48%), Gaps = 70/754 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC--------------------------- 121
           LK G+  H   I +G      + N  + MY KC                           
Sbjct: 40  LKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFG 99

Query: 122 ----GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
               G +  ++  F+ M H  D VSWN+++SG L N   +K +  F +M   G   D+ +
Sbjct: 100 CAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTT 159

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGDIEAAERAFW 235
           L+ ++   + L +   G  IH + +++G++   Y  VT S L+ MY++C  +E +   F 
Sbjct: 160 LAVSLKICSLLEDQVLGIQIHGIAVQMGFD---YDVVTGSALVDMYAKCNSLEDSLDVFS 216

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  K+ +SW+A I G   N +      L  EMQ  + +    +T  ++   CA     R
Sbjct: 217 ELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ-RKGIGVSQSTYASVFRSCAGLSASR 275

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            G  +H +A++   G D+++  + +D Y+K +++S A  LF ++ P ++L S+N+MI G 
Sbjct: 276 LGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLF-SLLPDHNLQSYNAMIIGY 334

Query: 356 ---------FKEMLYLC-SQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                    FK  L L  + FSF   +L   L +    +    G  +H   +K   S+N 
Sbjct: 335 ARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNI 394

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              NA++ MY  CG LV A  L   +    D   WN +I AC QN    + +  F +M +
Sbjct: 395 CVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACEQNESEGKTLSHFGAMLR 453

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            +   PD  T  +V+ AC        G  +HG  +KS MGL   V +AL+ MY +C  ++
Sbjct: 454 SK-MEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMME 512

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
            A  +        + +WN +IS FS  K    +   F H+     EP+  +  ++L  C 
Sbjct: 513 EAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCA 572

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            L  +  GKQIH  +  L    + +I+S L+DMYS C               + +  W++
Sbjct: 573 NLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNA 632

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI  + YHG G EA+ELF  M +  I+P  ++ +S+L ACSH G   +GL Y+  M   Y
Sbjct: 633 MICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIY 692

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P+ EH+ C+VD+LGRSG+++EA   I+++P +    +W  +LS C   G+ ++ ++ 
Sbjct: 693 ALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKA 752

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           A  L KL+PE+   Y  LSN+Y   G W+   +I
Sbjct: 753 ASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKI 786



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 158/593 (26%), Positives = 287/593 (48%), Gaps = 25/593 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++L+  Y+  +  E SL +F E  +K+ ++W+A I  CV+N  ++ GL  F
Sbjct: 187 GFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLF 246

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  +GI    +T   +  +   ++  + G  +HC ++K    +D  +    ++MYAKC
Sbjct: 247 KEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC 306

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +++ +   FS +   +  S+N ++ G   N    +    F ++  +    D VSLS A+
Sbjct: 307 DNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGAL 366

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+A +   S G  +H L IK     S  + V N+++ MY +CG +  A   F  M  +D
Sbjct: 367 SAAAVIKGHSEGLQLHGLAIKSNL--SSNICVANAILDMYGKCGALVEASGLFDEMEIRD 424

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSV 300
            VSWNAII     N    E   L H   ++RS +EPD  T  +++  CA       G  V
Sbjct: 425 PVSWNAIITACEQNES--EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEV 482

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG  I+  +G  + + ++L+D YSK   + +AE +   +     +VSWN++ISG      
Sbjct: 483 HGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT-MVSWNAIISGFSLQKK 541

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F  ML +  +    T   +L +C +  ++  GK IH   +KL   ++    + 
Sbjct: 542 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 601

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG++  +  L+ R +   D+  WN +I     +G  +EA++ F+ M   +N  
Sbjct: 602 LVDMYSKCGNMHDSL-LMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHML-HENIK 659

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P+  T V+V+ AC ++  A +G   +   + S+  L+ ++++   ++ + GR   ++ A 
Sbjct: 660 PNHATFVSVLRACSHVGNAKKGL-FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEAL 718

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
            + +   +  +   W  ++S    Q   EV        L+ +P + S  ++LS
Sbjct: 719 RLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLS 771



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 117/296 (39%), Gaps = 51/296 (17%)

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC------------- 519
           T  ++   C N      GK  H   + S       V N LI MY +C             
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 520 --RDIKSASTVFESC-----------------YNCNLCTWNCMISAFSQNKAEVRALELF 560
             RDI S +T+   C                 ++ ++ +WN +IS + QN    +++ +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 561 ---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
              R L    +  ++   L  C+ L     G QIHG    +GF  +    SAL+DMY+ C
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K+  +WS+ I+    + +    ++LF EM   GI  ++S+  S+ 
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
            +C+       G Q + + L+  D   +       +DM  +   + +AY+    LP
Sbjct: 266 RSCAGLSASRLGTQLHCHALKT-DFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 207/698 (29%), Positives = 343/698 (49%), Gaps = 36/698 (5%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  YA+ G++  ++  F  M   D VSWN+++S  LHN    K +  F  M      
Sbjct: 76  NTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIP 135

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D  + S  + A + + +   G  +H L I++G+E+   V   ++L+ MYS+C  ++ A 
Sbjct: 136 HDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFEND--VVTGSALVDMYSKCKKLDGAF 193

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M  +++V W+A+I G+  N +F E   L  +M L   +    +T  ++   CA  
Sbjct: 194 RIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM-LKVGMGVSQSTYASVFRSCAGL 252

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              + G  +HG+A++    YD ++  + +D Y+K + +S A  +FN + P     S+N++
Sbjct: 253 SAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL-PNPPRQSYNAI 311

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           I G            +F+ +      F   +L   L +C+  +    G  +H   +K G 
Sbjct: 312 IVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGL 371

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             N    N ++ MY  CG LV A ++   +    D   WN +I A  QN    + +  F 
Sbjct: 372 GFNICVANTILDMYGKCGALVEACTIFDDMERR-DAVSWNAIIAAHEQNEEIVKTLSLFV 430

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           SM +     PD  T  +V+ AC   +    G  +HG  +KS MGLD  V +AL+ MYG+C
Sbjct: 431 SMLRS-TMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH-LEFE--PNEISIVSIL 576
             +  A  + +        +WN +IS FS  K    A   F   LE    P+  +  ++L
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             C  +  +  GKQIH  +  L    + +I+S L+DMYS C               +   
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYV 609

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            WS+MI AY YHG G +AI+LF EM    ++P  +  IS+L AC+H G VD+GL Y+  M
Sbjct: 610 TWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIM 669

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
              Y + P  EH+ C+VD+LGRS ++ EA + I+++  +    +W  +LS C   G+ ++
Sbjct: 670 QSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEV 729

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++    L +L+P++   Y+ L+N+Y  +G W +  +I
Sbjct: 730 AEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKI 767



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 167/631 (26%), Positives = 292/631 (46%), Gaps = 70/631 (11%)

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  L+ GK  HA  I   +   P + V N L+  Y +  ++  A + F  M  +DV+SWN
Sbjct: 19  LKALNPGKQAHAQMIVTSF--VPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWN 76

Query: 247 AIIDGFALNGKF---EEAFDLLHEMQL-------------------------MRS--VEP 276
            +I G+A  G     +  FD + E  +                         MRS  +  
Sbjct: 77  TMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPH 136

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D AT   ++  C+       G  VH  AI+     D++  ++L+D YSK   L  A  +F
Sbjct: 137 DYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF 196

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             + P  +LV W+++I+G            LFK+ML +    S ST  ++  SC    + 
Sbjct: 197 REM-PERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAF 255

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           + G  +H   LK  F+ ++I   A + MY  C  +  A+ +   +  N     +N +IV 
Sbjct: 256 KLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP-NPPRQSYNAIIVG 314

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             +     +A++ F+S+ Q+   S D ++L   ++AC  ++   EG  LHGLA+K  +G 
Sbjct: 315 YARQDQGLKALEIFQSL-QRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGF 373

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
           +  V N ++ MYG+C  +  A T+F+     +  +WN +I+A  QN+  V+ L LF  + 
Sbjct: 374 NICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
               EP++ +  S++ AC     L +G +IHG +   G   + F+ SAL+DMY  C    
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLM 493

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      K+  +W+S+IS +    +   A   F +M   G+ P   +  ++L  C+
Sbjct: 494 EAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCA 553

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           +   ++ G Q +  +L + ++  +      +VDM  + G +Q++    +  P +     W
Sbjct: 554 NMATIELGKQIHAQIL-KLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYV-TW 611

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            AM+ A ++HG    G+Q  +L  +++  NV
Sbjct: 612 SAMICAYAYHGH---GEQAIKLFEEMQLLNV 639



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 285/598 (47%), Gaps = 35/598 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++L+  YS     + +  +F E   +++V W+A+I   V+N   + GL  F
Sbjct: 168 GFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ G+    +T   +  +   ++  K G  +H  ++K+    DS +    ++MYAKC
Sbjct: 228 KDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKC 287

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ +   F+ +      S+N I+ G    +   K L  F+ +  +    D +SLS A+
Sbjct: 288 DRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGAL 347

Query: 182 AASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A + +     G  +H L +K  LG+     + V N+++ MY +CG +  A   F  M  
Sbjct: 348 TACSVIKGHLEGIQLHGLAVKCGLGFN----ICVANTILDMYGKCGALVEACTIFDDMER 403

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D VSWNAII     N +  +   L   M L  ++EPD  T  +++  CA    L  G  
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSM-LRSTMEPDDFTYGSVVKACAGQQALNYGME 462

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +HG  ++  +G D  + ++L+D Y K   L +AE + + +      VSWNS+ISG     
Sbjct: 463 IHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEE-KTTVSWNSIISGFSSQK 521

Query: 356 --------FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                   F +ML    +   F+++T+L +   C +  ++E GK IH   LKL   ++  
Sbjct: 522 QSENAQRYFSQMLEMGVIPDNFTYATVLDV---CANMATIELGKQIHAQILKLNLHSDVY 578

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             + L+ MY  CG++  +  + ++ +   D   W+ +I A   +GH ++AIK F+ M Q 
Sbjct: 579 IASTLVDMYSKCGNMQDSRLMFEK-TPKRDYVTWSAMICAYAYHGHGEQAIKLFEEM-QL 636

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRD 521
            N  P+    ++V+ AC +  + +  K LH    ++S  GLD  +++   ++ + GR   
Sbjct: 637 LNVKPNHTIFISVLRACAH--MGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQ 694

Query: 522 IKSASTVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           +  A  + ES  +  +   W  ++S    Q   EV        L+ +P + S   +L+
Sbjct: 695 VNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 176/737 (23%), Positives = 335/737 (45%), Gaps = 56/737 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++  Y+ +     + +LF     +DVV+WN++++  + N      +  F  M    I  
Sbjct: 77  TMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPH 136

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T  +++ A + +     G  VHCL+I+ G   D    +  V+MY+KC  L+ +   F
Sbjct: 137 DYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF 196

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + V W+ +++G + N+   + L  F++M   G      + +S   + A L    
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256

Query: 192 YGKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            G  +H   +K    D  Y S+   + + MY++C  +  A + F  +      S+NAII 
Sbjct: 257 LGTQLHGHALK---SDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIV 313

Query: 251 GFALNGKFEEAFDLLHEMQ--LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           G+A   +  +A ++   +Q   +   E  ++  +T  S+    L   EG  +HG A++  
Sbjct: 314 GYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHL---EGIQLHGLAVKCG 370

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           LG+++ + N+++D Y K  +L +A  +F+ +    D VSWN++I+             LF
Sbjct: 371 LGFNICVANTILDMYGKCGALVEACTIFDDM-ERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
             ML    +    T  +++ +C   ++L +G  IH   +K G   +    +AL+ MY  C
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L+ A  +  R+   +  S WN +I   +     + A + F  M  +    PD+ T   
Sbjct: 490 GMLMEAEKIHDRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQML-EMGVIPDNFTYAT 547

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+  C N+     GK +H   LK  +  D  + + L+ MY +C +++ +  +FE     +
Sbjct: 548 VLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRD 607

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHG 593
             TW+ MI A++ +    +A++LF  ++    +PN    +S+L AC  +G +  G     
Sbjct: 608 YVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL---- 663

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           H F +           +   Y        +S M+   G   +  EA++L   M       
Sbjct: 664 HYFQI-----------MQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESM-----HF 707

Query: 654 TKSSVI--SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDM---LGRSGKL 707
               VI  +LLS C   G V+   + +N++L+   + P+ +  +V + ++   +G  G++
Sbjct: 708 EADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQ---LDPQDSSAYVLLANVYANVGMWGEV 764

Query: 708 QEAYEFIKNLPIQPKPG 724
            +    +KN  ++ +PG
Sbjct: 765 AKIRSIMKNCKLKKEPG 781



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 137/593 (23%), Positives = 247/593 (41%), Gaps = 100/593 (16%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T   ++  C++   L  G+  H   I       + + N L+ FY KS++++ A  +F+ +
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 340 APMNDLVSWNSMISG-------------------------------------------LF 356
            P  D++SWN+MI G                                           +F
Sbjct: 68  -PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
             M  L     ++T   +L +C+  E    G  +HC  +++GF N+ +  +AL+ MY  C
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
             L  AF + + +    +  CW+ VI    QN  F E +K FK M +       S T  +
Sbjct: 187 KKLDGAFRIFREMPER-NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS-TYAS 244

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V  +C  L     G  LHG ALKS    D+ +  A + MY +C  +  A  VF +  N  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHG 593
             ++N +I  +++    ++ALE+F+ L+      +EIS+   L+AC+ +     G Q+HG
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
                G   N  +++ +LDMY  C               +   +W+++I+A+  + +  +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
            + LF  M  S + P   +  S++ AC+    ++ G++ +  +++   +  +      +V
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS-GMGLDWFVGSALV 483

Query: 699 DMLGRSGKLQEAYEFIKNLP----------------------------------IQPKPG 724
           DM G+ G L EA +    L                                   + P   
Sbjct: 484 DMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDA 776
            +  +L  C++    ++GKQ+   + KL   +  Y  S L +MY   G  +D+
Sbjct: 544 TYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS 596



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 191/453 (42%), Gaps = 70/453 (15%)

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +F+FS    IL  C++ ++L  GK  H   +   F       N L+  Y    ++  AF
Sbjct: 5   KKFTFSH---ILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAF 61

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--------------- 468
            +  R+ H  D   WN +I    + G+   A   F +M ++   S               
Sbjct: 62  KVFDRMPHR-DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNR 120

Query: 469 ---------------PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
                           D  T   V+ AC  +E    G  +H LA++     D    +AL+
Sbjct: 121 KSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            MY +C+ +  A  +F      NL  W+ +I+ + QN   +  L+LF+ +       ++ 
Sbjct: 181 DMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-KSNAAW------ 623
           +  S+  +C  L   + G Q+HGH     F  +S I +A LDMY+ C + + AW      
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL 300

Query: 624 --------SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                   +++I  Y    +G +A+E+F  +  + +   + S+   L+ACS      EG+
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI 360

Query: 676 QYYNNMLEEYDVRPETEHHVC----IVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAML 730
           Q     L    V+     ++C    I+DM G+ G L EA     ++  + +  V W A++
Sbjct: 361 Q-----LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDM--ERRDAVSWNAII 413

Query: 731 SACSHHGDTKMGKQ----VAELLFKLEPENVGY 759
           +A  H  + ++ K     V+ L   +EP++  Y
Sbjct: 414 AA--HEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 206/659 (31%), Positives = 341/659 (51%), Gaps = 43/659 (6%)

Query: 155 PEKCLLYFREMGWSGEQADNVSL-SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           P   L Y    G   +  D V L  S V A     +L+ GK +H   ++ G +  P V +
Sbjct: 12  PADVLQYLHRKGPQVDSYDYVKLLQSCVKAK----DLAVGKQVHEHILRCGVK--PNVYI 65

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           TN+L+ +Y+ CG +  A + F   + K VVSWN +I G+A  G  +EAF+L   MQ  R 
Sbjct: 66  TNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQER- 124

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +EPD  T V+++S C+   +L  GR +H   +   L  D  + N+L+  Y+K  S+  A 
Sbjct: 125 LEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDAR 184

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKE-------------MLYLCSQFSFSTLLAILPSCNS 380
            +F+A+A   D VSW ++ +G + E             ML    + S  T + +L +C S
Sbjct: 185 RVFDAMAS-RDEVSWTTL-TGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGS 242

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +LE GK IH   ++  + ++     AL  MY+ CG    A  + + +S+  D   WN 
Sbjct: 243 LAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR-DVIAWNT 301

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I     +G  +EA  TF  M ++   +PD  T   V+SAC        GK +H  A K 
Sbjct: 302 MIRGFVDSGQLEEAHGTFHRMLEE-GVAPDRATYTTVLSACARPGGLARGKEIHARAAKD 360

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
            +  D R  NALI MY +   +K A  VF+     ++ +W  ++  ++     V +   F
Sbjct: 361 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           + +     + N+I+ + +L AC+    L+ GK+IH  V   G   +  +++AL+ MY  C
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKC 480

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +    W+++I   G +G+G EA++ +  M + G+RP  ++ +++L
Sbjct: 481 GSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVL 540

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC    LV+EG + +  M ++Y + P  +H+ C+VD+L R+G L+EA + I  +P++P 
Sbjct: 541 SACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPS 600

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             +WGA+L+AC  H + ++G++ AE   KLEP+N G Y+SLS +Y A G W+D  ++ K
Sbjct: 601 AAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRK 659



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 250/502 (49%), Gaps = 18/502 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  + +LL  Y++      +  LF +  NK VV+WN MI+            + F
Sbjct: 58  GVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLF 117

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +E +  D  T + I+SA +    L  GR +H   ++AG+  D+++ N  ++MYAKC
Sbjct: 118 TLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKC 177

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   D VSW T+      + Y E+ L  +  M     +   ++  + +
Sbjct: 178 GSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVL 237

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   L  L  GK IHA  ++  Y     V V+ +L  MY +CG  + A   F  ++ +D
Sbjct: 238 SACGSLAALEKGKQIHAHIVESEYHSD--VRVSTALTKMYMKCGAFKDAREVFECLSYRD 295

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V++WN +I GF  +G+ EEA    H M L   V PD AT  T++S CA    L  G+ +H
Sbjct: 296 VIAWNTMIRGFVDSGQLEEAHGTFHRM-LEEGVAPDRATYTTVLSACARPGGLARGKEIH 354

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
             A +  L  D+   N+L++ YSK+ S+  A  +F+ + P  D+VSW +++         
Sbjct: 355 ARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM-PKRDVVSWTTLLGRYADCDQV 413

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 FK+ML    + +  T + +L +C++P +L++GK IH   +K G   +    NAL
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNAL 473

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           M MY  CG +  A  + + +S   D   WN +I    QNG   EA++ ++ M + +   P
Sbjct: 474 MSMYFKCGSVEDAIRVFEGMSMR-DVVTWNTLIGGLGQNGRGLEALQRYEVM-KSEGMRP 531

Query: 470 DSVTLVNVISACGNLELAFEGK 491
           ++ T VNV+SAC    L  EG+
Sbjct: 532 NAATFVNVLSACRVCNLVEEGR 553



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 247/540 (45%), Gaps = 21/540 (3%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +G + DS   + ++ +  +   L  G+ VH   ++ G+  +  + N  + +YA CG +N
Sbjct: 21  RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F        VSWN ++SG  H    ++    F  M     + D  +  S ++A +
Sbjct: 81  EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L++G+ IH   ++ G  +    +V N+LISMY++CG +  A R F  M  +D VSW
Sbjct: 141 SPAVLNWGREIHVRVMEAGLAND--TTVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 198

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             +   +A +G  EE+    H M L   V P   T + ++S C     L +G+ +H + +
Sbjct: 199 TTLTGAYAESGYGEESLKTYHAM-LQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIV 257

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
                 D+ +  +L   Y K  +   A  +F  ++   D+++WN+MI G           
Sbjct: 258 ESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLS-YRDVIAWNTMIRGFVDSGQLEEAH 316

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F  ML        +T   +L +C  P  L  GK IH    K G  ++    NAL++MY
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMY 376

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G +  A  +  R+    D   W  ++          E+  TFK M  QQ    + +T
Sbjct: 377 SKAGSMKDARQVFDRMP-KRDVVSWTTLLGRYADCDQVVESFTTFKQML-QQGVKANKIT 434

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + V+ AC N      GK +H   +K+ +  D  V NAL++MY +C  ++ A  VFE   
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             ++ TWN +I    QN   + AL+ +  ++ E   PN  + V++LSAC    ++  G++
Sbjct: 495 MRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR 554



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 2/249 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++ +    +L+  YS     + +  +F     +DVV+W  ++    +   VV     F
Sbjct: 361 GLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTF 420

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+++G++ +  T + ++ A +    LK G+ +H   +KAG++AD ++ N  ++MY KC
Sbjct: 421 KQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKC 480

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F GM   D V+WNT++ G   N    + L  +  M   G + +  +  + +
Sbjct: 481 GSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVL 540

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A      +  G+   A   K  Y   P       ++ + ++ G +  AE     +  K 
Sbjct: 541 SACRVCNLVEEGRRQFAFMSK-DYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKP 599

Query: 242 VVS-WNAII 249
             + W A++
Sbjct: 600 SAAMWGALL 608


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 205/621 (33%), Positives = 334/621 (53%), Gaps = 37/621 (5%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++  G  +H +  KLG++   YV   N+L+ +Y  CG +  A R F  M  +DVVSWN I
Sbjct: 25  DICKGMEVHGVVFKLGFDTDVYVG--NTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTI 82

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I   ++NG + EA +    M L   ++P++ +V++L+ + A        R +H Y+++  
Sbjct: 83  IGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVG 142

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------F 356
           L   +   N+L+D Y K  S+     +FN     N+ VSWNS+I+GL            F
Sbjct: 143 LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE-VSWNSIINGLACKGRCWDALNAF 201

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           + M+   +Q +  T+ +ILP     E  + GK IH + +++G   +    N+L+ MY   
Sbjct: 202 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKS 261

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G    A ++   +   +  S WN +I     N    EAI+ F    Q+    P++VT  N
Sbjct: 262 GHSTEASTIFHNLDRRNIVS-WNAMIANYALNRLPLEAIR-FVIQMQETGECPNAVTFTN 319

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC  L     GK +H + ++  +  D  V N+LI MY +C  + SA  VF +    +
Sbjct: 320 VLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRK-D 378

Query: 537 LCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
             ++N +I  +S+    +++L LF   R L  +P+ +S V ++SAC  L  L+ GK++HG
Sbjct: 379 EVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHG 438

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
                    + F+S++LLD Y+ C               K  A+W++MI  YG  G+   
Sbjct: 439 VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELET 498

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           AI +F  M +  ++    S I++LSACSH GLV+ G QY++ ML +  + P   H+ C+V
Sbjct: 499 AISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMV 557

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR+G ++EA + I+ LPI P   +WGA+L AC  +G+ ++G++ AE LF+L+P++ G
Sbjct: 558 DLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCG 617

Query: 759 YYISLSNMYVALGRWKDAVEI 779
           YYI LSN+Y   GRW +A +I
Sbjct: 618 YYILLSNIYAETGRWDEANKI 638



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 323/682 (47%), Gaps = 51/682 (7%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           MV  G++ D  T   ++   +    + +G  VH +  K G   D  + N  + +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCL--HNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           LN +   F  M   D VSWNTI+ G L  + +Y E    YF  +  S  + + VS+ S +
Sbjct: 61  LNDARRLFDEMPERDVVSWNTII-GLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 119

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             SA L +    + IH   +K+G +    V+  N+L+  Y +CG ++A  + F     K+
Sbjct: 120 PISAALEDEEMTRRIHCYSVKVGLDSQ--VTTCNALVDAYGKCGSVKALWQVFNETVEKN 177

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN+II+G A  G+  +A +    M +    +P+  T+ +++ +  +    + G+ +H
Sbjct: 178 EVSWNSIINGLACKGRCWDALNAFR-MMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 236

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LF 356
           G+++R     D+ + NSL+D Y+KS   ++A  +F+ +   N +VSWN+MI+      L 
Sbjct: 237 GFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRN-IVSWNAMIANYALNRLP 295

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E +    Q   +       T   +LP+C     L  GK IH   +++G +++    N+L
Sbjct: 296 LEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSL 355

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L +A ++    +   D   +NI+I+  ++     +++  F  M +     P
Sbjct: 356 IDMYAKCGCLHSARNVFN--TSRKDEVSYNILIIGYSETDDCLQSLNLFSEM-RLLGKKP 412

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D V+ V VISAC NL    +GK +HG+AL++ +     V N+L+  Y +C  I  A  +F
Sbjct: 413 DVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLF 472

Query: 530 ESCYNCNLCTWNCMISAF---SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
                 ++ +WN MI  +    + +  +   E  R    + + +S +++LSAC+  G++ 
Sbjct: 473 NQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVE 532

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G Q    +     +          +M+  C        M+   G  G   EA +L  ++
Sbjct: 533 RGWQYFSEMLAQRLEPT--------EMHYTC--------MVDLLGRAGFVEEAAKLIQQL 576

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSG 705
               I P  +   +LL AC   G V+ G +   ++ E   ++P+   +++ + ++   +G
Sbjct: 577 ---PIAPDANIWGALLGACRIYGNVELGRRAAEHLFE---LKPQHCGYYILLSNIYAETG 630

Query: 706 KLQEA---YEFIKNLPIQPKPG 724
           +  EA    E +K+   +  PG
Sbjct: 631 RWDEANKIRELMKSRGAKKNPG 652



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 237/465 (50%), Gaps = 21/465 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           G  + + T  +L+ AY      ++   +F ET  K+ V+WN++I   AC + RC    L+
Sbjct: 142 GLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLAC-KGRCW-DALN 199

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M++ G + +S T+  I+  L ++ C K G+ +H  S++ G   D  + N  ++MYA
Sbjct: 200 AFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYA 259

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G    +   F  +   + VSWN +++    N  P + + +  +M  +GE  + V+ ++
Sbjct: 260 KSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTN 319

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A LG L  GK IHA+G+++G     +VS  NSLI MY++CG + +A   F   + 
Sbjct: 320 VLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS--NSLIDMYAKCGCLHSARNVF-NTSR 376

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD VS+N +I G++      ++ +L  EM+L+   +PD+ + V +IS CA+   L++G+ 
Sbjct: 377 KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-KPDVVSFVGVISACANLAALKQGKE 435

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VHG A+R  L   L + NSL+DFY+K   +  A  LFN I    D+ SWN+MI G     
Sbjct: 436 VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL-FKDVASWNTMILGYGMIG 494

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  +F+ M     Q+   + +A+L +C+    +E G       L        +   
Sbjct: 495 ELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYT 554

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            ++ +    G +  A  L+Q++    D + W  ++ AC   G+ +
Sbjct: 555 CMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVE 599



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 266/613 (43%), Gaps = 51/613 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +LL  Y N  +   +  LF E   +DVV+WN +I     N       +++
Sbjct: 40  GFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYY 99

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M+    I+ +  +++ ++     +   +  R +HC S+K G+ +  + CN  V+ Y K
Sbjct: 100 FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGK 159

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + +    F+     + VSWN+I++G          L  FR M  +G Q ++V++SS 
Sbjct: 160 CGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSI 219

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     L     GK IH   +++G E   +++  NSLI MY++ G    A   F  +  +
Sbjct: 220 LPVLVELECFKAGKEIHGFSMRMGTETDIFIA--NSLIDMYAKSGHSTEASTIFHNLDRR 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VSWNA+I  +ALN    EA   + +MQ      P+  T   ++  CA    L  G+ +
Sbjct: 278 NIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC-PNAVTFTNVLPACARLGFLGPGKEI 336

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   +R  L  DL + NSL+D Y+K   L  A  +FN      D VS+N +I G      
Sbjct: 337 HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN--TSRKDEVSYNILIIGYSETDD 394

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EM  L  +    + + ++ +C +  +L+ GK +H   L+    ++    N+
Sbjct: 395 CLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNS 454

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  Y  CG +  A  L  +I    D + WN +I+     G  + AI  F++M +     
Sbjct: 455 LLDFYTKCGRIDIACRLFNQILF-KDVASWNTMILGYGMIGELETAISMFEAM-RDDTVQ 512

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D V+ + V+SAC            HG       GL  R       M  +  +       
Sbjct: 513 YDLVSYIAVLSACS-----------HG-------GLVERGWQYFSEMLAQRLEPTEMH-- 552

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                      + CM+    +      A +L + L   P+     ++L AC   G +  G
Sbjct: 553 -----------YTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELG 601

Query: 589 KQIHGHVFHLGFQ 601
           ++   H+F L  Q
Sbjct: 602 RRAAEHLFELKPQ 614


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 187/598 (31%), Positives = 313/598 (52%), Gaps = 33/598 (5%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           +N  +    + G +  A R F  M+ KD +SW  +I G+       EA  L   M++   
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +  D   +      C  +  +  G  +HGYA++  L   + + ++L+D Y+K+  + +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F+ + PM ++VSW ++I+GL            F EM     ++   T    L +C   
Sbjct: 172 RVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADS 230

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L +G+ IH   +K GF  ++   N L  MY  CG L    +L +++S   D   W  +
Sbjct: 231 GALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTI 289

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    Q G  + A++ F  M ++ + SP+  T   VIS C NL     G+ LH L L   
Sbjct: 290 ITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +     V+N+++TMY +C  + S+S +F      ++ +W+ +I+ +SQ      A EL  
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 408

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +  E   P E ++ S+LSAC  + +L HGKQ+H +V  +G +  + + SAL++MY  C 
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468

Query: 619 S--------NAA-------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S        +AA       W++MI+ Y  HG   E I+LF ++   G+RP   + I +LS
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+GLVD G +Y+N M ++Y + P  EH+ C++D+L R+G+L +A   I+ +P     
Sbjct: 529 ACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VW  +L AC  HGD + G++ AE + +LEP   G +I+L+N+Y + G+W++A +I K
Sbjct: 589 VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRK 646



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 272/580 (46%), Gaps = 26/580 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-V 65
           LP S   L       +  ++  +F +   KD ++W  +I+  V        L  F  M V
Sbjct: 49  LPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRV 108

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           E G+R D   L +   A    + +  G ++H  ++K G++    + +  ++MY K G + 
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
                F  M   + VSW  I++G +   Y ++ L+YF EM  S  + D+ + + A+ A A
Sbjct: 169 EGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACA 228

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             G L+YG+ IHA  +K G++ S +V+  N+L +MY++CG +E     F  M+ +DVVSW
Sbjct: 229 DSGALNYGREIHAQAMKKGFDVSSFVA--NTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             II      G+ E A      M+    V P+  T   +IS CA+   +  G  +H   +
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMR-ESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
              L   L + NS+M  Y+K   L+ + ++F+ +    D+VSW+++I+G  +     E  
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYSQGGHVSEAF 404

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L S             L ++L +C +   LE GK +H + L +G  +  + ++AL++MY
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +    + N D   W  +I    ++G+ +E I  F+ +  +    PDSVT
Sbjct: 465 CKCGSIEEASRIFD-AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP-RVGLRPDSVT 522

Query: 474 LVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            + V+SAC   G ++L F  +  + ++ K  +         +I +  R   +  A  + E
Sbjct: 523 FIGVLSACSHAGLVDLGF--RYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIE 580

Query: 531 SC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPN 568
           +  ++ +   W+ ++ A       E       R L+ EPN
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 245/506 (48%), Gaps = 18/506 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   ++LL  Y+          +F+E   ++VV+W A+IT  V        L +F
Sbjct: 146 GLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    + +DS T  I + A      L  GR +H  ++K G    S + N    MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L      F  M   D VSW TI++  +     E  +  F  M  S    +  + ++ +
Sbjct: 266 GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVI 325

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A L  + +G+ +HAL + LG   S  +SV NS+++MY++CG + ++   F  MT +D
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAAS--LSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW+ II G++  G   EAF+LL  M+ M   +P    + +++S C +  +L  G+ +H
Sbjct: 384 IVSWSTIIAGYSQGGHVSEAFELLSWMR-MEGPKPTEFALASVLSACGNMAILEHGKQLH 442

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y +   L +  +++++L++ Y K  S+ +A  +F+A A  +D+VSW +MI+G       
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDA-AENDDIVSWTAMINGYAEHGYS 501

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF+++  +  +    T + +L +C+    ++ G +  +    K   S +      
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNA 467
           ++ +    G L  A  +++ +  + D   W+ ++ AC  +G  +   +T + + Q + N 
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621

Query: 468 SPDSVTLVNVISACGNLELAFEGKSL 493
           +   +TL N+ ++ G    A + + L
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKL 647



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 170/353 (48%), Gaps = 4/353 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF      + +L T Y+     E  L LF +   +DVV+W  +IT  V+       +  
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E  +  +  T   ++S    +  ++ G  +H L +  G+ A  S+ N  + MYAK
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L SS   F  M   D VSW+TI++G     +  +       M   G +    +L+S 
Sbjct: 366 CGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASV 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   +  L +GK +HA  + +G E +    V ++LI+MY +CG IE A R F      
Sbjct: 426 LSACGNMAILEHGKQLHAYVLSIGLEHTAM--VLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RS 299
           D+VSW A+I+G+A +G   E  DL  ++  +  + PD  T + ++S C+ + L+  G R 
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRV-GLRPDSVTFIGVLSACSHAGLVDLGFRY 542

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            +  + +  +         ++D   ++  LS AE +  A+    D V W++++
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 229/756 (30%), Positives = 380/756 (50%), Gaps = 38/756 (5%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           + FF EM + G++     +  +V+A  +    L +G  VH   +K G+++D  +    V+
Sbjct: 14  MRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVH 73

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           +Y   G    +   F  M   + VSW  +M   +    P   +  +R M   G   ++ +
Sbjct: 74  LYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNT 133

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           +SS ++    L     G  +    IK G E +  VSV NSLISM+   G +E A   F G
Sbjct: 134 MSSVISTCVSLENELLGYQVLGHVIKYGLETN--VSVANSLISMFGYFGSVEEACYVFSG 191

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M   D +SWN++I  +  NG  +E+      M  +   E +  T+ T+++ C     L+ 
Sbjct: 192 MDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK-EINSTTLSTMLAGCGSVDNLKW 250

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           GR +H   ++     ++   N+L+  YS +     AEL+F  +    D++SWNSM++   
Sbjct: 251 GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVE-KDMISWNSMMACYA 309

Query: 354 ---------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     L   M Y+    ++ T  + L +C+ PE    GK +H   + +G   N I
Sbjct: 310 QDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVI 369

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL+ +Y   G ++ A  + Q +    D   WN +I     +    EA+K FK M ++
Sbjct: 370 VGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGGHADSEEPDEALKAFKLM-RE 427

Query: 465 QNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    + +T+ NV+ AC    +L   G  +H   + +    D  VQN+LITMY +C D+ 
Sbjct: 428 EGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLN 487

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACT 580
           S++ +F+   + N   WN M++A + +     AL+     R      +E S    L+A  
Sbjct: 488 SSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAA 547

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
           +L +L  G+Q+HG    LG   N F++SA +DMY  C               +S  +W+ 
Sbjct: 548 KLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNI 607

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           + S++  HG   +A E FHEM N G++P   + +SLLSACSH G+V+EGL YY++M++E+
Sbjct: 608 LTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEF 667

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            +  +  H VCI+D+LGRSG+  EA  FIK +P+ P   VW ++L+AC  HG+ ++G++ 
Sbjct: 668 GIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKA 727

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            E L KL+P +   Y+  SN+    G+W+D  +I +
Sbjct: 728 VENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRR 763



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 212/779 (27%), Positives = 382/779 (49%), Gaps = 59/779 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ +   TSL+  Y N      ++ +F E   K+VV+W A++ A V+     M ++ +
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+  +  T+  ++S    +     G  V    IK G+  + S+ N  ++M+   
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FSGM   DT+SWN++++  + N   ++ L  F  M    ++ ++ +LS+ +
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A    +  L +G+ IH+L +K G+  +  V  +N+LI+MYS  G  E AE  F GM  KD
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSN--VCASNTLITMYSDAGRCEDAELVFQGMVEKD 297

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWN+++  +A +G   +A  LL  M  MR    +  T  + ++ C+D     EG+ +H
Sbjct: 298 MISWNSMMACYAQDGNCLDALKLLATMFYMRR-GANYVTFTSALAACSDPEFATEGKILH 356

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I   L  ++++ N+L+  Y+KS  + +A+ +F  + P  D V+WN++I G       
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTM-PKRDGVTWNALIGGHADSEEP 415

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNA 408
                 FK M       ++ T+  +L +C +P   LE G  IH + +  GF ++    N+
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNS 475

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGDL ++ ++  R++ + + S WN ++ A   +GH +EA+K    M ++   +
Sbjct: 476 LITMYAKCGDLNSSNNIFDRLT-SKNASAWNAMMAANAHHGHMEEALKFLLEM-RRAGVN 533

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSAS 526
            D  +    ++A   L +  EG+ LHGLA+K  +G D+   V +A + MYG+C +I    
Sbjct: 534 VDEFSFSECLAAAAKLAILEEGQQLHGLAVK--LGCDSNPFVASATMDMYGKCGEIDDVL 591

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLG 583
            +     N +  +WN + S+FS++    +A E F    +L  +P+ ++ VS+LSAC+  G
Sbjct: 592 RIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGG 651

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
           ++  G         L + ++      +     +C        +I   G  G+  EA    
Sbjct: 652 MVEEG---------LAYYDSMIKEFGIPAKIGHC------VCIIDLLGRSGRFAEAETFI 696

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLG 702
            EM    + PT     SLL+AC   G ++ G +   N+L+   + P  +  +V   ++  
Sbjct: 697 KEM---PVSPTDHVWRSLLAACKTHGNLELGRKAVENLLK---LDPSDDSAYVLYSNICA 750

Query: 703 RSGKLQEAYEFIKNL---PIQPKPGV-WGAMLSACSHHGDTKMG----KQVAELLFKLE 753
            +GK ++  +  + +    I+ KP   W  + +  S  G   MG     Q +E+  KLE
Sbjct: 751 TTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFG---MGDHSHPQASEIYAKLE 806



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 214/462 (46%), Gaps = 42/462 (9%)

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS-LLLREGRSVHGYAIRR 307
           + GF   G + E+    +EM+    V+P    V +L++ C  S  +L EG  VHG+ ++ 
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDF-GVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN------------SMISGL 355
            L  D+ +  SL+  Y      + A  +F  +   N +VSW             SM+  +
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKN-VVSWTALMVAYVDYGEPSMVMNI 118

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           ++ M       + +T+ +++ +C S E+   G  +    +K G   N    N+L+ M+  
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGY 178

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G +  A  +   +  + DT  WN +I A  +NG  +E+++ F  M +      +S TL 
Sbjct: 179 FGSVEEACYVFSGMDEH-DTISWNSMIAAYIRNGLCKESLRCFSWMFRVHK-EINSTTLS 236

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY---GRCRDIKSASTVFESC 532
            +++ CG+++    G+ +H L LK     +    N LITMY   GRC D   A  VF+  
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCED---AELVFQGM 293

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGK 589
              ++ +WN M++ ++Q+   + AL+L     ++    N ++  S L+AC+       GK
Sbjct: 294 VEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGK 353

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H  V H+G  EN  + +AL+ +Y+                 +    W+++I  +    
Sbjct: 354 ILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSE 413

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSAC-SHSGLVDEGL 675
           +  EA++ F  M   G+     ++ ++L AC + + L++ G+
Sbjct: 414 EPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGM 455


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 225/771 (29%), Positives = 379/771 (49%), Gaps = 74/771 (9%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
           V+W A+I+  V+       LH F +M    +  D   L+ +++A                
Sbjct: 116 VSWTALISGYVQAGLPHEALHIFDKMRNSAVP-DQVALVTVLNAY--------------- 159

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
            I  G + D+  C +F  M                +   + V+WN ++SG     + E+ 
Sbjct: 160 -ISLGKLDDA--CQLFQQM---------------PIPIRNVVAWNVMISGHAKTAHYEEA 201

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L +F +M   G ++   +L+S ++A A L  L++G ++HA  IK G+E S YV+  +SLI
Sbjct: 202 LAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVA--SSLI 259

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           +MY +C   + A + F  ++ K+++ WNA++  ++ NG      +L  +M +   + PD 
Sbjct: 260 NMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDM-ISCGIHPDE 318

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T  +++S CA    L  GR +H   I++    +L + N+L+D Y+K+ +L +A   F  
Sbjct: 319 FTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEH 378

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           +    D +SWN++I G            LF+ M+         +L +IL +C + + LE 
Sbjct: 379 MT-YRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEA 437

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G+  HC  +KLG   N    ++L+ MY  CGD+  A      +   S  S   ++     
Sbjct: 438 GQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL 497

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH-GLALKSLMGLD 505
           +N   +E+I     M Q     P  +T  ++I  C        G  +H  +  + L+   
Sbjct: 498 KNT--KESINLLHEM-QILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGS 554

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELFRHLE 564
             +  +L+ MY   + +  A+ +F    +  ++  W  +IS   QN+    AL L+R + 
Sbjct: 555 EFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMR 614

Query: 565 ---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
                P++ + V++L AC  L  L  G++IH  +FH GF  +   SSAL+DMY+ C    
Sbjct: 615 DNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVK 674

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       K   +W+SMI  +  +G    A+++F EM  S I P   + + +L+AC
Sbjct: 675 SSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTAC 734

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SH+G V EG Q ++ M+  Y + P  +H+ C+VD+LGR G L+EA EFI  L ++P   +
Sbjct: 735 SHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMI 794

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           W  +L AC  HGD K G++ A+ L +LEP++   Y+ LSNMY A G W +A
Sbjct: 795 WANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEA 845



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 191/744 (25%), Positives = 340/744 (45%), Gaps = 53/744 (7%)

Query: 7   LPTSTSLLT---AYSNVSYFESSLALFYE--TCNKDVVTWNAMITACVENRCVVMGLHFF 61
           +P   +L+T   AY ++   + +  LF +     ++VV WN MI+   +       L FF
Sbjct: 146 VPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFF 205

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + G++   +TL  ++SA+  +  L  G +VH  +IK G  +   + +  +NMY KC
Sbjct: 206 HQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKC 265

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
              + +   F  +   + + WN ++     N +    +  F +M   G   D  + +S +
Sbjct: 266 QMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSIL 325

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  AC   L  G+ +H+  IK  +  + +V+  N+LI MY++ G ++ A + F  MT +D
Sbjct: 326 STCACFEYLEVGRQLHSAIIKKRFTSNLFVN--NALIDMYAKAGALKEAGKHFEHMTYRD 383

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +SWNAII G+        AF L   M ++  + PD  ++ +++S C +  +L  G+  H
Sbjct: 384 HISWNAIIVGYVQEEVEAGAFSLFRRM-ILDGIVPDEVSLASILSACGNIKVLEAGQQFH 442

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             +++  L  +L   +SL+D YSK   +  A   ++++ P   +VS N++I+G       
Sbjct: 443 CLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSM-PERSVVSVNALIAGYALKNTK 501

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGVNA 408
               L  EM  L  + S  T  +++  C     +  G  IHC  +K G    +  +G  +
Sbjct: 502 ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLG-TS 560

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY++   L  A  L    S       W  +I    QN     A+  ++ M +  N S
Sbjct: 561 LLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREM-RDNNIS 619

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD  T V V+ AC  L    +G+ +H L   +   LD    +AL+ MY +C D+KS+  V
Sbjct: 620 PDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQV 679

Query: 529 FES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           FE      ++ +WN MI  F++N     AL++F  +      P++++ + +L+AC+  G 
Sbjct: 680 FEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGW 739

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           +  G+QI                  +++ Y        ++ M+   G  G   EA E   
Sbjct: 740 VYEGRQIF---------------DVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFID 784

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGR 703
           ++    + P      +LL AC   G    G +    ++E   + P++   +V + +M   
Sbjct: 785 KL---EVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIE---LEPQSSSPYVLLSNMYAA 838

Query: 704 SGKLQEAYEFIKNL---PIQPKPG 724
           SG   EA    + +    IQ  PG
Sbjct: 839 SGNWDEARSLRRTMIKKDIQKIPG 862



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 173/617 (28%), Positives = 290/617 (47%), Gaps = 48/617 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF + +  ++SL+  Y      + +  +F     K+++ WNAM+    +N  +   +  
Sbjct: 246 QGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMEL 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+  GI  D  T   I+S       L+ GR +H   IK    ++  + N  ++MYAK
Sbjct: 306 FLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAK 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F  M   D +SWN I+ G +           FR M   G   D VSL+S 
Sbjct: 366 AGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASI 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   +  L  G+  H L +KLG E + +    +SLI MYS+CGDI+ A + +  M  +
Sbjct: 426 LSACGNIKVLEAGQQFHCLSVKLGLETNLFAG--SSLIDMYSKCGDIKDAHKTYSSMPER 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VVS NA+I G+AL    +E+ +LLHEMQ++  ++P   T  +LI +C  S  +  G  +
Sbjct: 484 SVVSVNALIAGYALKNT-KESINLLHEMQIL-GLKPSEITFASLIDVCKGSAKVILGLQI 541

Query: 301 HGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H   ++R LL     +  SL+  Y  S  L+ A +LF+  + +  +V W ++ISG     
Sbjct: 542 HCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNE 601

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  L++EM         +T + +L +C    SL  G+ IH      GF  + +  +
Sbjct: 602 CSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSS 661

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CGD+ ++  + + ++   D   WN +IV   +NG+ + A+K F  MT Q   
Sbjct: 662 ALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMT-QSCI 720

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           +PD VT + V++AC +    +EG+ +  + + +  G++ RV +                 
Sbjct: 721 TPDDVTFLGVLTACSHAGWVYEGRQIFDV-MVNYYGIEPRVDH----------------- 762

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       + CM+    +      A E    LE EPN +   ++L AC   G  + 
Sbjct: 763 ------------YACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKR 810

Query: 588 GKQIHGHVFHLGFQENS 604
           G++    +  L  Q +S
Sbjct: 811 GQRAAKKLIELEPQSSS 827



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 200/792 (25%), Positives = 349/792 (44%), Gaps = 126/792 (15%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L F+   +  G   D  T  + +SA  ++  L  GR VH   IK+G+ + S      +++
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91

Query: 118 YAKCGDLNSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           YAKC  L  +   F+        TVSW  ++SG +    P + L  F +M          
Sbjct: 92  YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMR--------- 142

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
             +SAV     L                       V+V N+ IS+    G ++ A + F 
Sbjct: 143 --NSAVPDQVAL-----------------------VTVLNAYISL----GKLDDACQLFQ 173

Query: 236 GM--TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
            M    ++VV+WN +I G A    +EEA    H+M     V+   +T+ +++S  A    
Sbjct: 174 QMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMS-KHGVKSSRSTLASVLSAIASLAA 232

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G  VH +AI++     + + +SL++ Y K      A  +F+AI+  N ++ WN+M+ 
Sbjct: 233 LNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKN-MIVWNAMLG 291

Query: 354 ------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        LF +M+         T  +IL +C   E LE G+ +H   +K  F++
Sbjct: 292 VYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTS 351

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N    NAL+ MY   G L  A    + +++    S WN +IV   Q      A   F+ M
Sbjct: 352 NLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHIS-WNAIIVGYVQEEVEAGAFSLFRRM 410

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRC 519
                  PD V+L +++SACGN+++   G+  H L++K  +GL+T +   ++LI MY +C
Sbjct: 411 I-LDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVK--LGLETNLFAGSSLIDMYSKC 467

Query: 520 RDIKSASTVFESCYNCNLCTWNCMIS--AFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
            DIK A   + S    ++ + N +I+  A    K  +  L   + L  +P+EI+  S++ 
Sbjct: 468 GDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITFASLID 527

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENS-FISSALLDMY----------------SNCKSN 620
            C     +  G QIH  +   G    S F+ ++LL MY                S+ KS 
Sbjct: 528 VCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSI 587

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             W+++IS +  +     A+ L+ EM ++ I P +++ +++L AC+    + +G + ++ 
Sbjct: 588 VMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSL 647

Query: 681 MLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM---------- 729
           +    +D+   T     +VDM  + G ++ + +  + L  +     W +M          
Sbjct: 648 IFHTGFDLDELTSS--ALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYA 705

Query: 730 -------------------------LSACSHHGDTKMGKQVAELL---FKLEPENVGYYI 761
                                    L+ACSH G    G+Q+ +++   + +EP  V +Y 
Sbjct: 706 KCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPR-VDHYA 764

Query: 762 SLSNMYVALGRW 773
            + ++   LGRW
Sbjct: 765 CMVDL---LGRW 773



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 28/291 (9%)

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           E +  F +       SPD  T    +SAC  L+    G+++H   +KS +   +  Q AL
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCT--WNCMISAFSQNKAEVRALELFRHLEFE--PN 568
           I +Y +C  +  A T+F S    +L T  W  +IS + Q      AL +F  +     P+
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPD 148

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMIS 628
           ++++V++L+A   LG L    Q+        FQ+          M    ++  AW+ MIS
Sbjct: 149 QVALVTVLNAYISLGKLDDACQL--------FQQ----------MPIPIRNVVAWNVMIS 190

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            +       EA+  FH+M   G++ ++S++ S+LSA +    ++ GL  + + +++    
Sbjct: 191 GHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQ---G 247

Query: 689 PETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            E+  +V   +++M G+     +A +    +  Q    VW AML   S +G
Sbjct: 248 FESSIYVASSLINMYGKCQMPDDARQVFDAIS-QKNMIVWNAMLGVYSQNG 297


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 219/766 (28%), Positives = 380/766 (49%), Gaps = 91/766 (11%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           S  L+ ++ +      L   +++H    +  + +D+ LCN  +++Y+KC  + S+   F 
Sbjct: 5   SLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFD 64

Query: 133 GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFR-----------------EMGWSGEQADN 174
            +   +  S+N I+S  C  NN    C L+ +                 + G+  +  D 
Sbjct: 65  KIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDT 124

Query: 175 VSL------------SSAVAASAC--LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
             L            + A   SAC  L +++ G+  H L +K+G++ + YVS  N+L+ M
Sbjct: 125 YDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVS--NALLCM 182

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y++CG  E A R F G+   + V++  ++ G +   + +E  +L   M L + +  D  +
Sbjct: 183 YTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLM-LRKGICVDSVS 241

Query: 281 VVTLISLCA---------DSLLLR---EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           + T++ +CA         DS  L    +G+ +H  A++     DL + NSL+D Y+K+  
Sbjct: 242 LSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGD 301

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
           +  AE +F  +   + +VSWN MISG                       C+S ++LE  +
Sbjct: 302 MDSAENVFENLDK-HSVVSWNIMISGYGNR-------------------CDSEKALECFQ 341

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            + C     G+  + +    ++   +  GD+     +   +S  S  S WN ++    Q+
Sbjct: 342 RMQC----CGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLIS-WNAILSGYNQS 396

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               EA++ F+ M Q Q  +PD  TL  ++S+C  L L   GK +H ++ K     D  V
Sbjct: 397 ADHGEAVELFRKM-QFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYV 455

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEF 565
            ++LI +Y +C  ++ +  VF      ++  WN MI+ FS N  E  AL  F   R   F
Sbjct: 456 ASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGF 515

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
            P+E S  +I S+C +L  L  G+QIH  +   G+ +N F+ S+L++MY  C        
Sbjct: 516 FPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARY 575

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K+   W+ MI  Y ++G G EA+ L+ +M +SG +P   + +++L+ACSHS L
Sbjct: 576 YFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSAL 635

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           VDEG++ +++ML++++V P+ +H+ CI+D LGR G+  E    +  +P +    VW  +L
Sbjct: 636 VDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVL 695

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           S+C  H +  + K+ AE L +L P N   Y+ L+NMY ++GRW DA
Sbjct: 696 SSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDA 741



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 165/611 (27%), Positives = 284/611 (46%), Gaps = 75/611 (12%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG-EMVEEGIR 70
           ++L+A+   +  + +  LF +   ++ V+ N +IT  V+N      L  +   MV E ++
Sbjct: 76  AILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVK 135

Query: 71  FDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
               T   + SA   L  +NC   GR  H L +K G  ++  + N  + MY KCG    +
Sbjct: 136 PSHITFATVFSACGGLKDVNC---GRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDA 192

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS-------A 180
              F G+   + V++ T+M G    N  ++ L  FR M   G   D+VSLS+        
Sbjct: 193 FRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKG 252

Query: 181 VAASAC-----LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           V+   C     L   + GK IH L +K G+E    + + NSL+ MY++ GD+++AE  F 
Sbjct: 253 VSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERD--LHLCNSLLDMYAKTGDMDSAENVFE 310

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +    VVSWN +I G+      E+A +    MQ     EPD  T + +++ C  S  ++
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCC-GYEPDDVTYINMLTACVKSGDVK 369

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            GR +          +D +   S                          L+SWN+++SG 
Sbjct: 370 VGRQI----------FDCMSSPS--------------------------LISWNAILSGY 393

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      LF++M +       +TL  IL SC     LE GK +H    KLGF ++ 
Sbjct: 394 NQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDV 453

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              ++L+++Y  CG +  +  +  ++S   D  CWN +I   + N   Q+A+  FK M +
Sbjct: 454 YVASSLINVYSKCGKMEVSKHVFSKLSE-LDVVCWNSMIAGFSINSLEQDALACFKRM-R 511

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           Q    P   +   + S+C  L   F+G+ +H   +K     +  V ++L+ MY +C D+ 
Sbjct: 512 QFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVG 571

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           +A   F+     N+ TWN MI  ++ N   + A+ L++ +     +P++I+ V++L+AC+
Sbjct: 572 AARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACS 631

Query: 581 QLGVLRHGKQI 591
              ++  G +I
Sbjct: 632 HSALVDEGVEI 642



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 242/518 (46%), Gaps = 75/518 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  S +LL  Y+     E +  +F      + VT+  M+    +   V  GL  F
Sbjct: 168 GFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELF 227

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ------------MNCLKQGRVVHCLSIKAGMIADSS 109
             M+ +GI  DS +L  I+    +            ++   QG+ +H L++K G   D  
Sbjct: 228 RLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLH 287

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           LCN  ++MYAK GD++S+E  F  +     VSWN ++SG  +    EK L  F+ M   G
Sbjct: 288 LCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCG 347

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D+V+  + +  +AC+                                   + GD++ 
Sbjct: 348 YEPDDVTYINML--TACV-----------------------------------KSGDVKV 370

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
             + F  M+   ++SWNAI+ G+  +    EA +L  +MQ      PD  T+  ++S CA
Sbjct: 371 GRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQ-NPDRTTLAIILSSCA 429

Query: 290 DSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           +  LL  G+ VH  A+ + LG+  D+ + +SL++ YSK   +  ++ +F+ ++ + D+V 
Sbjct: 430 ELGLLEAGKQVH--AVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSEL-DVVC 486

Query: 348 WNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           WNSMI+G             FK M    +  S+FSF+T   I  SC    SL  G+ IH 
Sbjct: 487 WNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFAT---IASSCAKLSSLFQGQQIHA 543

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K G+ +N    ++L+ MY  CGD+ AA      +    +   WN +I     NG+  
Sbjct: 544 QIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMP-GKNIVTWNEMIHGYAHNGYGL 602

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           EA+  +K M       PD +T V V++AC +  L  EG
Sbjct: 603 EAVSLYKDMI-SSGEKPDDITFVAVLTACSHSALVDEG 639



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 39/377 (10%)

Query: 13  LLTAYSNVSYFESSLALFY--ETC--NKDVVTWNAMITACVENRCVVMGLHFF------- 61
           +++ Y N    E +L  F   + C    D VT+  M+TACV++  V +G   F       
Sbjct: 323 MISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPS 382

Query: 62  -----------------GEMVE--EGIRF-----DSTTLLIIVSALTQMNCLKQGRVVHC 97
                            GE VE    ++F     D TTL II+S+  ++  L+ G+ VH 
Sbjct: 383 LISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHA 442

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
           +S K G   D  + +  +N+Y+KCG +  S+  FS +   D V WN++++G   N+  + 
Sbjct: 443 VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQD 502

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            L  F+ M   G      S ++  ++ A L  L  G+ IHA  IK GY D+ +V   +SL
Sbjct: 503 ALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVG--SSL 560

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           + MY +CGD+ AA   F  M  K++V+WN +I G+A NG   EA  L  +M +    +PD
Sbjct: 561 VEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDM-ISSGEKPD 619

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLF 336
             T V +++ C+ S L+ EG  +    +++  +   L     ++D   +    ++ E++ 
Sbjct: 620 DITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVIL 679

Query: 337 NAIAPMNDLVSWNSMIS 353
           + +   +D + W  ++S
Sbjct: 680 DTMPYKDDTIVWEVVLS 696



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  ++SL+  YS     E S  +F +    DVV WN+MI     N      L  F
Sbjct: 448 GFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACF 507

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G      +   I S+  +++ L QG+ +H   IK G + +  + +  V MY KC
Sbjct: 508 KRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKC 567

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD+ ++   F  M   + V+WN ++ G  HN Y  + +  +++M  SGE+ D+++  + +
Sbjct: 568 GDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVL 627

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
            A +    +  G  I +  ++  +E  P +     +I    + G     E     M  K 
Sbjct: 628 TACSHSALVDEGVEIFSSMLQ-KFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKD 686

Query: 241 DVVSWNAII 249
           D + W  ++
Sbjct: 687 DTIVWEVVL 695



 Score = 39.3 bits (90), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 71/161 (44%), Gaps = 26/161 (16%)

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           E   ++++++L +C     L   K IH  +F      ++F+ + L+D+YS C        
Sbjct: 2   EVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHH 61

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI--SLLSACSHS 668
                  K+  ++++++SA+        A  LF +M      P +++V   ++++    +
Sbjct: 62  VFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQM------PERNTVSLNTIITTMVKN 115

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G   + L  Y+ M+    V+P    H+    +    G L++
Sbjct: 116 GYERQALDTYDLMMVYESVKPS---HITFATVFSACGGLKD 153


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 207/619 (33%), Positives = 332/619 (53%), Gaps = 40/619 (6%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            K +HAL +  G   S ++S    LI+ Y+  GDI  A   F  +  KDV +WN++I  +
Sbjct: 59  AKQLHALLVVSGKTQSIFLSA--KLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAY 116

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A  G F  A D  +E      ++ D  T   +I  C +   L +GR VH   ++     D
Sbjct: 117 ARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECD 173

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           + +  S + FYS+   +S A  LF+ +  + D+ +WN+MISG            +F EM 
Sbjct: 174 VYIAASFIHFYSRFGFVSLACNLFDNMM-IRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           +        T+ ++LP C   + +  G  IH + +KLG   +    NAL++MY   G+L 
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +A ++  ++    D   WN ++ A  QN     A+  +  M       PD +TLV++ S 
Sbjct: 293 SAETIFNQMK-VRDIVSWNSLLAAFEQNKKPVIALGVYNKM-HSIGVVPDLLTLVSLASV 350

Query: 481 CGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
              L      +S+HG   +    L D  + NA+I MY +   I SA  VFE     ++ +
Sbjct: 351 AAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVIS 410

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           WN +I+ +SQN     A++++  + +     PN+ + VSIL+A +QLG L+ G + HG +
Sbjct: 411 WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
                  + F+S+ L+DMY  C               +S+ +W+++IS +G HG G +A+
Sbjct: 471 IKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAV 530

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF EM + G++P   + +SLLSACSHSGLVDEG   +  M E Y +RP  +H+ C+VD+
Sbjct: 531 KLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDL 590

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
            GR+G L++A+ F+KN+P++P   VWGA+L AC  H + ++ + V++ L K+E ENVGYY
Sbjct: 591 FGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYY 650

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + LSN+Y  LG W+   E+
Sbjct: 651 VLLSNIYAKLGHWEGVDEV 669



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 170/604 (28%), Positives = 290/604 (48%), Gaps = 56/604 (9%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T+++  KQ   +H L + +G      L    +N YA  GD+  +  TF  +   D  +WN
Sbjct: 54  TKVHLAKQ---LHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWN 110

Query: 144 TIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           +++S      +    +  F E +  S  Q+D+ +    + A    G L  G+ +H L +K
Sbjct: 111 SMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLK 167

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LG+E   Y++   S I  YS+ G +  A   F  M  +D+ +WNA+I GF LNGK  EA 
Sbjct: 168 LGFECDVYIAA--SFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEAL 225

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           ++  EM+  +SV  D  T+ +L+ +C     +  G  +H YAI+  L +DL + N+L++ 
Sbjct: 226 EVFDEMRF-KSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINM 284

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFST 370
           Y+K   L  AE +FN +  + D+VSWNS+++            G++ +M  +       T
Sbjct: 285 YAKFGELRSAETIFNQMK-VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLT 343

Query: 371 LLAILPSCNSPESLEFGKSIH------CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           L+++        +    +SIH      CW     F ++    NA++ MY   G + +A  
Sbjct: 344 LVSLASVAAELGNFLSSRSIHGFVTRRCW-----FLHDIALGNAIIDMYAKLGFIDSARK 398

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           + + +    D   WN +I   +QNG   EAI  + SM     A P+  T V++++A   L
Sbjct: 399 VFEGLP-VKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQL 457

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               +G   HG  +K+ +  D  V   L+ MYG+C  +  A ++F    + +  +WN +I
Sbjct: 458 GALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAII 517

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S    +   ++A++LF+ ++ E   P+ I+ VS+LSAC+  G++  G+      F L  Q
Sbjct: 518 SCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQW----CFQL-MQ 572

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           E   I  +L            +  M+  +G  G   +A   F+ + N  +RP  S   +L
Sbjct: 573 ETYGIRPSL----------KHYGCMVDLFGRAGHLEKA---FNFVKNMPVRPDVSVWGAL 619

Query: 662 LSAC 665
           L AC
Sbjct: 620 LGAC 623



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 264/533 (49%), Gaps = 27/533 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG- 68
           S  L+  Y+ +     +   F +   KDV TWN+MI+A          +  F E +    
Sbjct: 78  SAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSF 137

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D  T   ++ A   ++    GR VHCL +K G   D  +   F++ Y++ G ++ + 
Sbjct: 138 LQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLAC 194

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D  +WN ++SG   N    + L  F EM +     D+V++SS +     L 
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++  G +IH   IKLG E   +  V N+LI+MY++ G++ +AE  F  M  +D+VSWN++
Sbjct: 255 DIISGVLIHVYAIKLGLEFDLF--VCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSL 312

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           +  F  N K   A  + ++M  +  V PD+ T+V+L S+ A+       RS+HG+  RR 
Sbjct: 313 LAAFEQNKKPVIALGVYNKMHSI-GVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRC 371

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
              +D+ + N+++D Y+K   +  A  +F  + P+ D++SWNS+I+     GL  E + +
Sbjct: 372 WFLHDIALGNAIIDMYAKLGFIDSARKVFEGL-PVKDVISWNSLITGYSQNGLANEAIDV 430

Query: 363 CSQFSF--------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            S   +         T ++IL + +   +L+ G   H   +K     +      L+ MY 
Sbjct: 431 YSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYG 490

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A SL   + H S  S WN +I     +G+  +A+K FK M Q +   PD +T 
Sbjct: 491 KCGKLADALSLFYEVPHQSSVS-WNAIISCHGLHGYGLKAVKLFKEM-QSEGVKPDHITF 548

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           V+++SAC +  L  EG+    L ++   G+   +++   ++ ++GR   ++ A
Sbjct: 549 VSLLSACSHSGLVDEGQWCFQL-MQETYGIRPSLKHYGCMVDLFGRAGHLEKA 600



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 244/511 (47%), Gaps = 26/511 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + S +  YS   +   +  LF     +D+ TWNAMI+    N  V   L  F
Sbjct: 169 GFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVF 228

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  + +  DS T+  ++    Q++ +  G ++H  +IK G+  D  +CN  +NMYAK 
Sbjct: 229 DEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKF 288

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L S+E  F+ M   D VSWN++++    N  P   L  + +M   G   D ++L S  
Sbjct: 289 GELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348

Query: 182 AASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + +A LG     + IH    +  +   D   +++ N++I MY++ G I++A + F G+  
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHD---IALGNAIIDMYAKLGFIDSARKVFEGLPV 405

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SWN++I G++ NG   EA D+   M+      P+  T V++++  +    L++G  
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMK 465

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
            HG  I+  L +D+ +   L+D Y K   L+ A  LF  + P    VSWN++IS      
Sbjct: 466 AHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEV-PHQSSVSWNAIISCHGLHG 524

Query: 354 ------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTI 404
                  LFKEM     +    T +++L +C+    ++ G+   C+QL     G   +  
Sbjct: 525 YGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQ--WCFQLMQETYGIRPSLK 582

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMT 462
               ++ ++   G L  AF+ ++ +    D S W  ++ AC   +N      +       
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKV 642

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           + +N     V L N+ +  G+ E   E +SL
Sbjct: 643 ESENVGY-YVLLSNIYAKLGHWEGVDEVRSL 672


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/698 (29%), Positives = 341/698 (48%), Gaps = 36/698 (5%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  YA  G++  ++  F  M   D VSWN+++S  LHN    K +  F  M      
Sbjct: 76  NTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIP 135

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D  + +  + A + + +   G  +H L I++G+E+   V   ++L+ MYS+C  ++ A 
Sbjct: 136 HDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEND--VVTGSALVDMYSKCKKLDDAF 193

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M  +++V W+A+I G+  N +F E   L  +M L   +    +T  ++   CA  
Sbjct: 194 RVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDM-LKVGMGVSQSTYASVFRSCAGL 252

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              + G  +HG+A++    YD ++  + +D Y+K   +  A  +FN + P     S+N++
Sbjct: 253 SAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL-PNPPRQSYNAI 311

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           I G            +F+ +      F   +L   L +C+  +    G  +H   +K G 
Sbjct: 312 IVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGL 371

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             N    N ++ MY  CG L+ A  + + +    D   WN +I A  QN    + +  F 
Sbjct: 372 GFNICVANTILDMYGKCGALMEACLIFEEMERR-DAVSWNAIIAAHEQNEEIVKTLSLFV 430

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           SM +     PD  T  +V+ AC   +    G  +HG  +KS MGLD  V +AL+ MYG+C
Sbjct: 431 SMLRS-TMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKC 489

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSIL 576
             +  A  +          +WN +IS FS  K    A   F  +      P+  +  ++L
Sbjct: 490 GMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVL 549

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             C  +  +  GKQIH  +  L    + +I+S L+DMYS C               +   
Sbjct: 550 DVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYV 609

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            WS+MI AY YHG G +AI LF EM    ++P  +  IS+L AC+H G VD+GL Y+  M
Sbjct: 610 TWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKM 669

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           L  Y + P+ EH+ C+VD+LGRSG++ EA + I+++P +    +W  +LS C   G+ ++
Sbjct: 670 LSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEV 729

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++    L +L+P++   Y+ L+N+Y  +G W +  ++
Sbjct: 730 AEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKM 767



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 179/736 (24%), Positives = 337/736 (45%), Gaps = 54/736 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+ +     + +LF     +DVV+WN++++  + N      +  F  M    I  
Sbjct: 77  TLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPH 136

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T  +I+ A + +     G  VHCL+I+ G   D    +  V+MY+KC  L+ +   F
Sbjct: 137 DYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF 196

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + V W+ +++G + N+   + L  F++M   G      + +S   + A L    
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            G  +H   +K    D  Y S+  +  + MY++C  +  A + F  +      S+NAII 
Sbjct: 257 LGTQLHGHALK---SDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIV 313

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A   +  +A D+   +Q   ++  D  ++   ++ C+      EG  +HG A++  LG
Sbjct: 314 GYARQDQGLKALDIFQSLQ-RNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLG 372

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
           +++ + N+++D Y K  +L +A L+F  +    D VSWN++I+             LF  
Sbjct: 373 FNICVANTILDMYGKCGALMEACLIFEEM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVS 431

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML    +    T  +++ +C   ++L +G  IH   +K G   +    +AL+ MY  CG 
Sbjct: 432 MLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGM 491

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L+ A  +  R+   +  S WN +I   +     + A + F  M  +    PD+ T   V+
Sbjct: 492 LMEAEKIHARLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQML-EMGIIPDNYTYATVL 549

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
             C N+     GK +H   LK  +  D  + + L+ MY +C +++ +  +FE     +  
Sbjct: 550 DVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYV 609

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TW+ MI A++ +    +A+ LF  ++    +PN    +S+L AC  +G +  G     H 
Sbjct: 610 TWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL----HY 665

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           F             +L  Y        +S M+   G  G+  EA++L   M      P +
Sbjct: 666 FQ-----------KMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESM------PFE 708

Query: 656 SSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVD---MLGRSGKLQ 708
           +  +   +LLS C   G V+   + +N++L+   + P+ +  +V + +   ++G  G++ 
Sbjct: 709 ADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQ---LDPQDSSAYVLLANVYAIVGMWGEVA 765

Query: 709 EAYEFIKNLPIQPKPG 724
           +    +KN  ++ +PG
Sbjct: 766 KMRSIMKNCKLKKEPG 781



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 279/595 (46%), Gaps = 29/595 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++L+  YS     + +  +F E   +++V W+A+I   V+N   + GL  F
Sbjct: 168 GFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ G+    +T   +  +   ++  K G  +H  ++K+    DS +    ++MYAKC
Sbjct: 228 KDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKC 287

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F+ +      S+N I+ G    +   K L  F+ +  +    D +SLS A+
Sbjct: 288 ERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGAL 347

Query: 182 AASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A + +     G  +H L +K  LG+     + V N+++ MY +CG +  A   F  M  
Sbjct: 348 TACSVIKRHLEGIQLHGLAVKCGLGFN----ICVANTILDMYGKCGALMEACLIFEEMER 403

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D VSWNAII     N +  +   L   M L  ++EPD  T  +++  CA    L  G  
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSM-LRSTMEPDDFTYGSVVKACAGQQALNYGTE 462

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +HG  I+  +G D  + ++L+D Y K   L +AE + +A       VSWNS+ISG   + 
Sbjct: 463 IHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI-HARLEEKTTVSWNSIISGFSSQK 521

Query: 360 LYLCSQFSFSTLL--AILPS----------CNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
               +Q  FS +L   I+P           C +  ++E GK IH   LKL   ++    +
Sbjct: 522 QSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAS 581

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+ MY  CG++  +  + ++ +   D   W+ +I A   +G  ++AI  F+ M Q  N 
Sbjct: 582 TLVDMYSKCGNMQDSRLMFEK-APKRDYVTWSAMICAYAYHGLGEKAINLFEEM-QLLNV 639

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
            P+    ++V+ AC +  + +  K LH    + S  GLD ++++   ++ + GR   +  
Sbjct: 640 KPNHTIFISVLRACAH--MGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNE 697

Query: 525 ASTVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           A  + ES  +  +   W  ++S    Q   EV        L+ +P + S   +L+
Sbjct: 698 ALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 53/200 (26%)

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN------- 620
            +++   IL  C+ L  L  GKQ+H  +   GF    ++++ LL  Y  CKS+       
Sbjct: 5   KKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFY--CKSSKMNYAFK 62

Query: 621 -----------------------------------------AAWSSMISAYGYHGKGWEA 639
                                                     +W+S++S Y ++G   ++
Sbjct: 63  VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIV 698
           IE+F  M +  I    ++   +L AC  SG+ D GL    + L  +     +      +V
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALV 180

Query: 699 DMLGRSGKLQEAYEFIKNLP 718
           DM  +  KL +A+   + +P
Sbjct: 181 DMYSKCKKLDDAFRVFREMP 200


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 217/800 (27%), Positives = 392/800 (49%), Gaps = 45/800 (5%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS       ++A F +   ++VV+WN MI+A    +     L  F  M+ EG+  ++ TL
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           + ++++      L+ G +VH LS++ G   ++ +    +NMY KCG L  ++  F  M  
Sbjct: 62  VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121

Query: 137 ADTVSWNTIM-----SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            + V+WN ++      GC      E     F  M   G +A+ ++  + + +      L 
Sbjct: 122 KNVVTWNAMLGVYSLQGCCWKLAVE----LFTRMLLEGVKANVITFLNVLNSVVDPDALR 177

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH+   +   E S  V V  +L++ Y++CG +  A + F GM C+ V +WN++I  
Sbjct: 178 KGKFIHSCVRE--SEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISA 235

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           ++++ +  EAF +   MQ       D  T ++++  C +   L+ G+ V           
Sbjct: 236 YSISERSGEAFFIFQRMQ-QEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           DL +  +L+  Y++  S   A  +F  +   N L++W+++I+              F+ M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTN-LITWSAIITAFADHGHCGEALRYFRMM 353

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                  +  T +++L    +P  LE    IH    + G  + T   NAL+++Y  C   
Sbjct: 354 QQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESP 413

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A ++  ++   +  S WN +I    Q     +A++ F++M QQQ   PD V  + ++ 
Sbjct: 414 DDARTVFDQLELPNLIS-WNSMIGIYVQCERHDDALQLFRTM-QQQGIQPDRVNFMTILG 471

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC         K +H    +S +G    VQ +L+ MY +  ++  A  + +      +  
Sbjct: 472 ACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA 531

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I+ ++ +     ALE ++ L+ E    ++++ +S+L+ACT    L  GK IH +  
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 591

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G   +  + +AL +MYS C               +S  +W+ M+ AY  HG+  E ++
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 651

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           L  +M   G++    + +S+LS+CSH+GL+ EG QY++++  +  +  +TEH+ C+VD+L
Sbjct: 652 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 711

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+GKLQEA ++I  +P++P    W ++L AC    D   GK  A  L +L+P N    +
Sbjct: 712 GRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASV 771

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LSN+Y   G WK+A ++ +
Sbjct: 772 VLSNIYSERGDWKNAAKLRR 791



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 181/675 (26%), Positives = 333/675 (49%), Gaps = 48/675 (7%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY++CG L  +   F  +   + VSWN ++S        ++ L  F  M   G   + ++
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L + + +     EL  G ++HAL ++ G+  +  V+   +L++MY +CG +  A+  F  
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVA--TALLNMYGKCGTLLDAQSVFEE 118

Query: 237 MTCKDVVSWNAIIDGFALNG-KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M  K+VV+WNA++  ++L G  ++ A +L   M L+  V+ ++ T + +++   D   LR
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRM-LLEGVKANVITFLNVLNSVVDPDALR 177

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           +G+ +H          D+ +  +L++ Y+K  SL+ A  +F+ + P   + +WNSMIS  
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM-PCRSVGTWNSMISAY 236

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      +F+ M     +    T L+IL +C +PE+L+ GK +     +  F  + 
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
               AL+ MY  C     A  +  R+   ++   W+ +I A   +GH  EA++ F+ M Q
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMKQ-TNLITWSAIITAFADHGHCGEALRYFR-MMQ 354

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           Q+   P+ VT +++++         E   +H L  +  +   T ++NAL+ +YGRC    
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACT 580
            A TVF+     NL +WN MI  + Q +    AL+LFR ++    +P+ ++ ++IL ACT
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
                R  K +H  V   G   +  + ++L++MY+                 +   AW+ 
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNV 534

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-- 683
           +I+ Y  HG+  EA+E + ++    I   K + IS+L+AC+ S  + EG   ++N +E  
Sbjct: 535 LINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECG 594

Query: 684 -EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
            + DV  +      + +M  + G ++ A     ++PI+     W  ML A + HG++   
Sbjct: 595 LDSDVIVKN----ALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGES--- 646

Query: 743 KQVAELLFKLEPENV 757
           ++V +L+ K+E E V
Sbjct: 647 EEVLKLIRKMEQEGV 661



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 204/790 (25%), Positives = 355/790 (44%), Gaps = 62/790 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLH 59
           RGF  +   +T+LL  Y        + ++F E   K+VVTWNAM+    ++  C  + + 
Sbjct: 87  RGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVE 146

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M+ EG++ +  T L +++++   + L++G+ +H    ++    D  +    VN Y 
Sbjct: 147 LFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYT 206

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L  +   F GM C    +WN+++S    +    +    F+ M   GE+ D V+  S
Sbjct: 207 KCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLS 266

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A      L +GK +     +  +E   +V    +LI+MY++C   E A + F  M  
Sbjct: 267 ILDACVNPETLQHGKHVRESISETSFELDLFVG--TALITMYARCRSPEDAAQVFGRMKQ 324

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            ++++W+AII  FA +G   EA      MQ    + P+  T ++L++       L E   
Sbjct: 325 TNLITWSAIITAFADHGHCGEALRYFRMMQ-QEGILPNRVTFISLLNGFTTPSGLEELSR 383

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
           +H       L     M N+L++ Y +  S   A  +F+ +  + +L+SWNSMI       
Sbjct: 384 IHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQL-ELPNLISWNSMIGIYVQCE 442

Query: 354 ------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF+ M     Q      + IL +C         K +H    + G   + +   
Sbjct: 443 RHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQT 502

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L++MY   G+L  A  +LQ +     T+ WN++I     +G  +EA++ ++ +  Q  A
Sbjct: 503 SLVNMYAKAGELDVAEVILQEMDEQQITA-WNVLINGYALHGRSREALEAYQKL--QLEA 559

Query: 468 SP-DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            P D VT ++V++AC +     EGK +H  A++  +  D  V+NAL  MY +C  +++A 
Sbjct: 560 IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENAR 619

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLG 583
            +F+S    +  +WN M+ A++Q+      L+L R +E E    N I+ VS+LS+C+  G
Sbjct: 620 RIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 679

Query: 584 VLRHGKQIHGHVFH-LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           ++  G Q     FH LG      + +              +  ++   G  GK  EA + 
Sbjct: 680 LIAEGCQ----YFHSLGHDRGIEVKT------------EHYGCLVDLLGRAGKLQEAEKY 723

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDML 701
             +M    + P   +  SLL AC     +D G      +LE   + P  +   V + ++ 
Sbjct: 724 ISKM---PLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLE---LDPGNSSASVVLSNIY 777

Query: 702 GRSGKLQEAYEF--------IKNLP----IQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
              G  + A +         +K +P    IQ K  V    +   SH    ++  +V EL 
Sbjct: 778 SERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELC 837

Query: 750 FKLEPENVGY 759
           F +     GY
Sbjct: 838 FAM--REAGY 845


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 198/666 (29%), Positives = 342/666 (51%), Gaps = 78/666 (11%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L     GK++H    +LG     Y+   NSLI+ YS+ GD+ + E+ F  MT +DVV+
Sbjct: 89  AKLRRFEDGKMVHKQLDELGLAIDIYLG--NSLINFYSKFGDVASVEQVFRRMTLRDVVT 146

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+++I  +A N    +AFD    M+   ++EP+  T ++++  C +  +L + R +H   
Sbjct: 147 WSSMIAAYAGNNHPAKAFDTFERMKDA-NIEPNRITFLSILKACNNYSMLEKAREIHTVV 205

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
               +  D+ +  +L+  YSK   +S A  +F  +   N +VSW ++I            
Sbjct: 206 KASGMETDVAVATALITMYSKCGEISLACEIFQKMKERN-VVSWTAIIQANAQHRKLNEA 264

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L+++ML      +  T +++L SCN+PE+L  G+ IH    + G   + +  NAL+ M
Sbjct: 265 FELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITM 324

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-----FQEAIKTFKSMTQQQNA 467
           Y  C  +  A     R+S   D   W+ +I    Q+G+       E  +  + M +++  
Sbjct: 325 YCKCNCIQDARETFDRMS-KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERM-RREGV 382

Query: 468 SPDSVTLVNVISAC---GNLELAFEGKSLHG----LALKSLMGLDTRVQN---------- 510
            P+ VT ++++ AC   G LE   +G+ +H     +  +S   L T + N          
Sbjct: 383 FPNKVTFMSILKACSVHGALE---QGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYE 439

Query: 511 -----------------ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
                            +L+TMY +C D+ SA  VF      N+ +WN MI+ ++Q+   
Sbjct: 440 AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDI 499

Query: 554 VRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            +  EL   ++   F+P+ ++I+SIL AC  L  L  GK +H     LG + ++ ++++L
Sbjct: 500 AKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSL 559

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           + MYS C               +   AW++M++ YG HG G EA++LF  M    + P +
Sbjct: 560 IGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNE 619

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +  +++SAC  +GLV EG + +  M E++ ++P  +H+ C+VD+LGR+G+LQEA EFI+
Sbjct: 620 ITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQ 679

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P +P   VW A+L AC  H + ++ +  A  + +LEP N   Y++LSN+Y   GRW D
Sbjct: 680 RMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDD 739

Query: 776 AVEIGK 781
           + ++ K
Sbjct: 740 STKVRK 745



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 314/666 (47%), Gaps = 76/666 (11%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +   G + + G+  +S T   I+    ++   + G++VH    + G+  D  L N  +N
Sbjct: 62  AIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLIN 121

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y+K GD+ S E  F  M   D V+W+++++    NN+P K    F  M  +  + + ++
Sbjct: 122 FYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRIT 181

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + A      L   + IH +    G E    V+V  +LI+MYS+CG+I  A   F  
Sbjct: 182 FLSILKACNNYSMLEKAREIHTVVKASGMETD--VAVATALITMYSKCGEISLACEIFQK 239

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  ++VVSW AII   A + K  EAF+L  +M L   + P+  T V+L++ C     L  
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKM-LQAGISPNAVTFVSLLNSCNTPEALNR 298

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR +H +   R L  D+++ N+L+  Y K N +  A   F+ ++   D++SW++MI+G  
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK-RDVISWSAMIAGYA 357

Query: 355 ------------LFKEMLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
                       +F+ +  +  +  F    T ++IL +C+   +LE G+ IH    K+GF
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGF 417

Query: 400 -------------------------------SNNTIGVNALMHMYINCGDLVAAFSLLQR 428
                                          + N +   +L+ MYI CGDL +A  +   
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSE 477

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +S  +  S WN++I    Q+G   +  +   SM + +   PD VT+++++ ACG L    
Sbjct: 478 MSTRNVVS-WNLMIAGYAQSGDIAKVFELLSSM-KVEGFQPDRVTIISILEACGALSALE 535

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            GK +H  A+K  +  DT V  +LI MY +C ++  A TVF+   N +   WN M++ + 
Sbjct: 536 RGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYG 595

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q+     A++LF+ +  E   PNEI+  +++SAC + G+++ G++I    F +  QE+  
Sbjct: 596 QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI----FRI-MQED-- 648

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                   +        +  M+   G  G+  EA E    M      P  S   +LL AC
Sbjct: 649 --------FRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRM---PCEPDISVWHALLGAC 697

Query: 666 -SHSGL 670
            SH  +
Sbjct: 698 KSHDNV 703



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 162/622 (26%), Positives = 282/622 (45%), Gaps = 67/622 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  YS      S   +F     +DVVTW++MI A   N         F  M +  I  
Sbjct: 118 SLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEP 177

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T L I+ A    + L++ R +H +   +GM  D ++    + MY+KCG+++ +   F
Sbjct: 178 NRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIF 237

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW  I+     +    +    + +M  +G   + V+  S + +      L+
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH+   + G E    V V N+LI+MY +C  I+ A   F  M+ +DV+SW+A+I G
Sbjct: 298 RGRRIHSHISERGLETD--VVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355

Query: 252 FALNG-----KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +A +G       +E F LL  M+    V P+  T ++++  C+    L +GR +H    +
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMR-REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN----------------------- 343
                D  +  ++ + Y+K  S+ +AE +F+ +   N                       
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKV 474

Query: 344 -------DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
                  ++VSWN MI+G            L   M     Q    T+++IL +C +  +L
Sbjct: 475 FSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSAL 534

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           E GK +H   +KLG  ++T+   +L+ MY  CG++  A ++  +IS N DT  WN ++  
Sbjct: 535 ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKIS-NRDTVAWNAMLAG 593

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             Q+G   EA+  FK M +++   P+ +T   VISACG   L  EG+ +       +M  
Sbjct: 594 YGQHGIGPEAVDLFKRMLKER-VPPNEITFTAVISACGRAGLVQEGREIF-----RIMQE 647

Query: 505 DTRVQNA------LITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRAL 557
           D R++        ++ + GR   ++ A    +      ++  W+ ++ A  ++   V+  
Sbjct: 648 DFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGA-CKSHDNVQLA 706

Query: 558 ELFRH--LEFEPNEISIVSILS 577
           E   H  L  EP+  S+   LS
Sbjct: 707 EWAAHHILRLEPSNASVYVTLS 728



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 229/500 (45%), Gaps = 49/500 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  +T+L+T YS       +  +F +   ++VV+W A+I A  ++R +      +
Sbjct: 209 GMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELY 268

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ GI  ++ T + ++++      L +GR +H    + G+  D  + N  + MY KC
Sbjct: 269 EKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKC 328

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK-----CLLYFREMGWSGEQADNVS 176
             +  +  TF  M   D +SW+ +++G   + Y +K            M   G   + V+
Sbjct: 329 NCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVT 388

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYE-----------------------------D 207
             S + A +  G L  G+ IHA   K+G+E                             +
Sbjct: 389 FMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME 448

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V    SL++MY +CGD+ +AE+ F  M+ ++VVSWN +I G+A +G   + F+LL  
Sbjct: 449 NKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSS 508

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M++    +PD  T+++++  C     L  G+ VH  A++  L  D ++  SL+  YSK  
Sbjct: 509 MKV-EGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCG 567

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +++A  +F+ I+   D V+WN+M++G            LFK ML      +  T  A++
Sbjct: 568 EVTEARTVFDKISN-RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVI 626

Query: 376 PSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C     ++ G+ I    Q              ++ +    G L  A   +QR+    D
Sbjct: 627 SACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPD 686

Query: 435 TSCWNIVIVACTQNGHFQEA 454
            S W+ ++ AC  + + Q A
Sbjct: 687 ISVWHALLGACKSHDNVQLA 706



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 173/394 (43%), Gaps = 50/394 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-----RCVV 55
           RG    +  + +L+T Y   +  + +   F     +DV++W+AMI    ++       + 
Sbjct: 309 RGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD 368

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
                   M  EG+  +  T + I+ A +    L+QGR +H    K G  +D SL     
Sbjct: 369 EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF 428

Query: 116 NMYA-------------------------------KCGDLNSSECTFSGMHCADTVSWNT 144
           NMYA                               KCGDL S+E  FS M   + VSWN 
Sbjct: 429 NMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNL 488

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +++G   +    K       M   G Q D V++ S + A   L  L  GK++HA  +KLG
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG 548

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            E    V+   SLI MYS+CG++  A   F  ++ +D V+WNA++ G+  +G   EA DL
Sbjct: 549 LESDTVVAT--SLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDL 606

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS------ 318
              M L   V P+  T   +IS C  + L++EGR +      R++  D  M         
Sbjct: 607 FKRM-LKERVPPNEITFTAVISACGRAGLVQEGREIF-----RIMQEDFRMKPGKQHYGC 660

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           ++D   ++  L +AE     +    D+  W++++
Sbjct: 661 MVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALL 694



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 60/389 (15%)

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  +EAI+    + +Q+    +S T   +I  C  L    +GK +H    +  + +D  +
Sbjct: 57  GRLKEAIQLL-GIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
            N+LI  Y +  D+ S   VF      ++ TW+ MI+A++ N    +A + F  ++    
Sbjct: 116 GNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           EPN I+ +SIL AC    +L   ++IH  V   G + +  +++AL+ MYS C        
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS---- 666
                  ++  +W+++I A   H K  EA EL+ +M  +GI P   + +SLL++C+    
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295

Query: 667 -------HSGLVDEGLQ----YYNNMLEEY-------DVRPETEHHVCIVDML------- 701
                  HS + + GL+      N ++  Y       D R ET   +   D++       
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDAR-ETFDRMSKRDVISWSAMIA 354

Query: 702 --GRSG-----KLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
              +SG      L E ++ ++ +  +   P    + ++L ACS HG  + G+Q+   + K
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414

Query: 752 LEPE-NVGYYISLSNMYVALGRWKDAVEI 779
           +  E +     ++ NMY   G   +A ++
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQV 443


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 217/701 (30%), Positives = 351/701 (50%), Gaps = 45/701 (6%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            ++ ++K      +   F     A+   WNTI++G L N         F EM    ++ D
Sbjct: 13  LIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPD 72

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + + SS +AA A L EL +GKV+ A  IK G ED   V V  S++ +Y++CG +  A   
Sbjct: 73  SYTYSSVLAACASLEELRFGKVVQARVIKCGAED---VFVCTSIVDLYAKCGHMAEAREV 129

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  ++   VVSW  ++ G+  +     A ++  EM+    VE +  TV ++IS C    +
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMR-HSGVEINSCTVTSVISACGRPSM 188

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           + E   VH +  +     D  +  +L+   SKS  ++ +E +F  +  +      N M++
Sbjct: 189 VCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVT 248

Query: 354 G------------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
                        LF  ML       +FS  +LL++L      + L  GK +H + LK G
Sbjct: 249 SFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVL------DCLNLGKQVHSYTLKSG 302

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
              +    ++L  MY  CG L  ++SL Q I    D +CW  +I    + G+ +EAI  F
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFK-DNACWASMISGFNEYGYLREAIGLF 361

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M  +   SPD  TL  V++ C +L      K +HG  L++ +     + +AL+  Y +
Sbjct: 362 SEMLDE-GTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSK 420

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSI 575
           C  +K A  V++     +  + + +IS +SQ+        LFR +    F  +  +I SI
Sbjct: 421 CGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSI 480

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-------CKSNA------- 621
           L A         G Q+H ++  +G      + S+LL MYS        CK+ +       
Sbjct: 481 LKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDL 540

Query: 622 -AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            AW+++I++Y  HGK  EA++++  M   G +P K + + +LSACSH GLV+EG  + N+
Sbjct: 541 IAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNS 600

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M+++Y + PE  H+VC+VD LGRSG+L+EA  FI   PI+P   VWG +L+AC  +GD +
Sbjct: 601 MVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVE 660

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +GK  A+   +LEP + G Y+SLSN+   +G W +  E  K
Sbjct: 661 LGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRK 701



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 213/754 (28%), Positives = 350/754 (46%), Gaps = 64/754 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  +    +SL+ A+S    FE +  +F +T + +V  WN +I   + N+        F
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM     + DS T   +++A   +  L+ G+VV    IK G   D  +C   V++YAKC
Sbjct: 62  HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGA-EDVFVCTSIVDLYAKC 120

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS +     VSW  ++SG   +N     L  FREM  SG + ++ +++S +
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180

Query: 182 AASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--- 237
           +A      +     +HA   K G Y D+   SV  +LISM S+ GDI  +ER F  +   
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDT---SVAAALISMNSKSGDINLSERVFEDLDDI 237

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +++V  N ++  F+ N K  +A  L   M L   + PD  +V +L+S+  D L L  G
Sbjct: 238 RRQNIV--NVMVTSFSQNKKPGKAIRLFTRM-LQEGLNPDEFSVCSLLSVL-DCLNL--G 291

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           + VH Y ++  L  DL + +SL   YSK  SL ++  LF  I P  D   W SMIS    
Sbjct: 292 KQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEI-PFKDNACWASMISGFNE 350

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GLF EML   +    STL A+L  C+S  SL   K IH + L+ G       
Sbjct: 351 YGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPL 410

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL++ Y  CG L  A  +  R+      SC ++ I   +Q+G  Q+    F+ M    
Sbjct: 411 GSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSL-ISGYSQHGLVQDGFLLFRDMV-MS 468

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             S DS  + +++ A    E +  G  +H    K  +  +  V ++L+TMY +   I+  
Sbjct: 469 GFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDC 528

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQL 582
              F      +L  W  +I++++Q+     AL+++   +   F+P++++ V +LSAC+  
Sbjct: 529 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHG 588

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G       FHL    NS +       Y     N  +  M+ A G  G+  EA   
Sbjct: 589 GLVEEG------YFHL----NSMVKD-----YGIEPENRHYVCMVDALGRSGRLREAENF 633

Query: 643 FHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIV 698
            +       RP K   +   +LL+AC   G V+ G       +E   + P +   +V + 
Sbjct: 634 IN------TRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIE---LEPSDAGAYVSLS 684

Query: 699 DMLGRSG---KLQEAYEFIKNLPIQPKPGVWGAM 729
           ++L   G   +++E  + +K   +Q +PG W ++
Sbjct: 685 NILAEVGEWDEVEETRKLMKGTGVQKEPG-WSSV 717


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 210/717 (29%), Positives = 362/717 (50%), Gaps = 41/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           V+C + K G+  ++ +C   V++ AK G L  +   F+    +  V WN  +SG + N  
Sbjct: 91  VYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGE 150

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-VSV 213
               +  FR+M W   + ++ + S A++A A   ELS G+ +H L ++    D  Y V V
Sbjct: 151 GGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLR---RDPEYDVFV 207

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             SL++MY++CGD+ AA R FW M  ++VVSW   I GF  + +   A  LL EM +   
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREM-VRNG 266

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  +  T  +++  CA   ++RE   +HG  ++  +  D ++  +L+  Y+    +  +E
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 334 LLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            +F     +++   W++ ISG           L + M +   + +     ++  S NS  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +EFG  +H   +K GF +  +  +AL  MY  C ++  ++ + + +    D   W  ++
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMV 442

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                +GH  EA  TF++M       PD V+L  ++SAC   E   +GK +HG  L+ + 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILD-GFKPDHVSLTAILSACNRPECLLKGKEVHGHTLR-VY 500

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           G  T + +  I+MY +C+ +++A  +F++    +   W+ MIS ++ N     A+ LF+ 
Sbjct: 501 GETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQL 560

Query: 563 LEFEPNEISIV---SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---- 615
           +      I      SILS C  +    + K +HG+    G   +  +SS+L+ +YS    
Sbjct: 561 MVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGN 620

Query: 616 -----------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                      +     AW+++I  Y  HG    A+ +F  M   G+RP    ++S+LSA
Sbjct: 621 MDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CS +GLV++G  Y+N+M   Y V PE +H+ C+VD+LGRSG+L EA  F+ ++P++P   
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +L+AC  H DT +G+ V E   +    + G + +LSN+    G W++   I K
Sbjct: 741 VWSTLLAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRK 796



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 273/597 (45%), Gaps = 33/597 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T ++   +       +L +F +      V WNA ++  V N    + +  F +MV     
Sbjct: 108 TGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCE 167

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T    +SA      L  GR VH L ++     D  +    VNMYAKCGD+ ++   
Sbjct: 168 PNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMRE 227

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSW T ++G + ++ P   +L  REM  +G   +  + +S + A A +  +
Sbjct: 228 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 287

Query: 191 SYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAI 248
                IH + +K   Y D     V  +LIS Y+  G IE +E+ F    T  +   W+A 
Sbjct: 288 REASQIHGMVLKTEMYLD---CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAF 344

Query: 249 IDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I G + N     +  LL  M  Q +R  +   A+V + ++       +  G  +H  AI+
Sbjct: 345 ISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVN------SIEFGGQLHSSAIK 397

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
               + +L+ ++L   YS+ +++  +  +F  +    D VSW +M++G            
Sbjct: 398 EGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQE-RDGVSWTAMVAGFATHGHSVEAFL 456

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F+ M+    +    +L AIL +CN PE L  GK +H   L++ +   T   +  + MY 
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYS 515

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C  +  A  +    +   D   W+ +I     NG  +EAI  F+ M    +   DS   
Sbjct: 516 KCQGVQTARRIFD-ATPRKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYIC 573

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            +++S C ++   F  K LHG A+K+ +  D  V ++L+ +Y R  ++  +  VF+    
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHG 588
            +L  W  +I  ++Q+ +   AL +F     L   P+ + +VS+LSAC++ G++  G
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 186/358 (51%), Gaps = 15/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   ++L T YS     + S  +F E   +D V+W AM+     +   V     F
Sbjct: 399 GFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTF 458

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN-VFVNMYAK 120
             M+ +G + D  +L  I+SA  +  CL +G+ VH  +++  +  +++  N  F++MY+K
Sbjct: 459 RNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLR--VYGETTFINDCFISMYSK 516

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  + ++   F      D V W++++SG   N   E+ +  F+ M  +  + D+   SS 
Sbjct: 517 CQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSI 576

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +    Y K +H   IK G       SV++SL+ +YS+ G+++ + + F  ++  
Sbjct: 577 LSLCADIARPFYCKPLHGYAIKAGILSDQ--SVSSSLVKVYSRSGNMDDSRKVFDEISVP 634

Query: 241 DVVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D+V+W  IIDG+A +G  + A   FDL+ ++     V PD   +V+++S C+ + L+ +G
Sbjct: 635 DLVAWTTIIDGYAQHGSSQNALAMFDLMVQL----GVRPDTVVLVSVLSACSRNGLVEQG 690

Query: 298 RSVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +    ++R   G +  + +   ++D   +S  L++A+   +++    DL+ W+++++
Sbjct: 691 FNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLA 747


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 201/625 (32%), Positives = 338/625 (54%), Gaps = 43/625 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAI 248
           L  GK+IH   + LG +++  +++  SLI++Y  C   ++A+  F  +    D+  WN +
Sbjct: 19  LKQGKLIHQKIVSLGLQNN--ITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGL 76

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +     N  F E  ++ H +     ++PD  T  +++  C+    +  G+ VH + I+  
Sbjct: 77  MAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG 136

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
              D+++M+S +  Y+K N    A  LF+ + P  D+ SWN++IS             LF
Sbjct: 137 FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM-PERDVASWNNVISCYYQDGQPEKALELF 195

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +EM     +    TL  ++ SC     LE GK IH   ++ GF+ +    +AL+ MY  C
Sbjct: 196 EEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC 255

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  + ++I   +  S WN +I   +  G  +  I+ F+ M  ++   P   TL +
Sbjct: 256 GCLEMAKEVFEQIQRKNVVS-WNSMIAGYSLKGDSKSCIELFRRM-DEEGIRPTLTTLSS 313

Query: 477 VISACG---NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++ AC    NL+L   GK +HG  +++ +  D  V ++LI +Y +C +I SA  VF++  
Sbjct: 314 ILMACSRSVNLQL---GKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 370

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
             N+ +WN MIS + +  + + AL +F   R    +P+ I+  S+L AC+QL VL  GK+
Sbjct: 371 KTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKE 430

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH  +     + N  +  ALLDMY+ C               +   +W+SMI+AYG HG+
Sbjct: 431 IHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQ 490

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
            +EA++LF +M  S  +P K + +++LSACSH+GLVDEG  Y+N M+ EY  +P  EH+ 
Sbjct: 491 AFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYS 550

Query: 696 CIVDMLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           C++D+LGR G+L+EAYE ++  P I+   G+   + SAC  H    +G+Q+  LL + +P
Sbjct: 551 CLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDP 610

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
           ++   YI LSNMY ++ +W +  ++
Sbjct: 611 DDPSTYIILSNMYASVKKWDEVRKV 635



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 181/673 (26%), Positives = 326/673 (48%), Gaps = 45/673 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+T LL ++        LKQG+++H   +  G+  + +LC   +N+Y  C    S++  F
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 132 SGMHCA-DTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             +    D   WN +M+ C  N  + E   ++ R + +   + D  +  S + A + LG 
Sbjct: 62  QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + YGK++H   IK G+     V V +S + MY++C   E A + F  M  +DV SWN +I
Sbjct: 122 VGYGKMVHTHVIKSGFAMD--VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  +G+ E+A +L  EM++    +PD  T+ T+IS CA  L L  G+ +H   +R   
Sbjct: 180 SCYYQDGQPEKALELFEEMKV-SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  + ++L+D Y K   L  A+ +F  I   N +VSWNSMI+G            LF+
Sbjct: 239 ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN-VVSWNSMIAGYSLKGDSKSCIELFR 297

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + + +TL +IL +C+   +L+ GK IH + ++     +    ++L+ +Y  CG
Sbjct: 298 RMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           ++ +A ++ Q +   +  S WN++I    + G + EA+  F  M ++    PD++T  +V
Sbjct: 358 NIGSAENVFQNMPKTNVVS-WNVMISGYVKVGSYLEALVIFTDM-RKAGVKPDAITFTSV 415

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC  L +  +GK +H   ++S + ++  V  AL+ MY +C  +  A  +F      + 
Sbjct: 416 LPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDF 475

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  MI+A+  +     AL+LF  ++    +P++++ ++ILSAC+  G++  G      
Sbjct: 476 VSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEG------ 529

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                     +  + ++  Y    +   +S +I   G  G+  EA E+        IR  
Sbjct: 530 ---------CYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR--TPDIRED 578

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF- 713
              + +L SAC     +D G Q    ++E+    P T  ++ + +M     K  E  +  
Sbjct: 579 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPST--YIILSNMYASVKKWDEVRKVR 636

Query: 714 --IKNLPIQPKPG 724
             IK L ++  PG
Sbjct: 637 LKIKELGLKKNPG 649



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 282/565 (49%), Gaps = 40/565 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           G   ++    SL+  Y +   F+S+  +F    N  D+  WN ++ AC +N   + GL  
Sbjct: 33  GLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEV 92

Query: 61  FGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  ++    ++ D+ T   ++ A + +  +  G++VH   IK+G   D  + +  V MYA
Sbjct: 93  FHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYA 152

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC     +   F  M   D  SWN ++S    +  PEK L  F EM  SG + D+V+L++
Sbjct: 153 KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTT 212

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +++ A L +L  GK IH   ++ G+    +VS  ++L+ MY +CG +E A+  F  +  
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQR 270

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+VVSWN++I G++L G  +   +L   M     + P + T+ +++  C+ S+ L+ G+ 
Sbjct: 271 KNVVSWNSMIAGYSLKGDSKSCIELFRRMD-EEGIRPTLTTLSSILMACSRSVNLQLGKF 329

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +HGY IR  +  D+ + +SL+D Y K  ++  AE +F  + P  ++VSWN MISG  K  
Sbjct: 330 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNM-PKTNVVSWNVMISGYVKVG 388

Query: 360 LYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
            YL +   F+            T  ++LP+C+    LE GK IH + ++     N + + 
Sbjct: 389 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 448

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CG +  A  +  ++    D   W  +I A   +G   EA+K F+ M QQ +A
Sbjct: 449 ALLDMYAKCGAVDEALHIFNQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKM-QQSDA 506

Query: 468 SPDSVTLVNVISACGN---------------LELAFEGKSLHGLALKSLMGLDTRVQNAL 512
            PD VT + ++SAC +                E  F+    H   L  L+G   R++ A 
Sbjct: 507 KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAY 566

Query: 513 ITMYGRCRDIKSA----STVFESCY 533
             +  R  DI+      ST+F +C+
Sbjct: 567 -EILQRTPDIREDVGLLSTLFSACH 590



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 269/575 (46%), Gaps = 80/575 (13%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D   +++L+  C DS  L++G+ +H   +   L  ++ +  SL++ Y   +    A+L+F
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 337 NAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL-------------AILPSCNSPES 383
             I    D+  WN +++   K  +++     F  LL             ++L +C+    
Sbjct: 62  QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           + +GK +H   +K GF+ + + +++ + MY  C     A  L   +    D + WN VI 
Sbjct: 122 VGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER-DVASWNNVIS 180

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              Q+G  ++A++ F+ M +     PDSVTL  VIS+C  L     GK +H   ++S   
Sbjct: 181 CYYQDGQPEKALELFEEM-KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 239

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           LD  V +AL+ MYG+C  ++ A  VFE     N+ +WN MI+ +S        +ELFR +
Sbjct: 240 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 564 EFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           + E   P   ++ SIL AC++   L+ GK IHG++     + + F++S+L+D+Y  C   
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 618 -----------KSN-AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                      K+N  +W+ MIS Y   G   EA+ +F +M  +G++P   +  S+L AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLP----- 718
           S   ++++G + +N ++E    + E    V   ++DM  + G + EA      LP     
Sbjct: 420 SQLAVLEKGKEIHNFIIES---KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFV 476

Query: 719 -----------------------------IQPKPGVWGAMLSACSHHGDTKMG-----KQ 744
                                         +P    + A+LSACSH G    G     + 
Sbjct: 477 SWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 536

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +AE  FK     V +Y  L ++   +GR ++A EI
Sbjct: 537 IAEYGFK---PAVEHYSCLIDLLGRVGRLREAYEI 568


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 189/596 (31%), Positives = 318/596 (53%), Gaps = 34/596 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S++S+ G I  A R F  +  K    ++ ++ G+A N   E A   L  M+    V+
Sbjct: 86  KLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRY-DDVK 144

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ +C D+  L+ G+ +HG  I      ++  M  +++ Y+K   +  A  +
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204

Query: 336 FNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPES 383
           F+ + P  DLVSWN++I+G       K+ L L  +           TL+ +LP+      
Sbjct: 205 FDRM-PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  GKSIH + ++ GF+       AL  MY  CG +  A  +   +   +  S WN ++ 
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVS-WNSMMD 322

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG  ++AI  F+ M ++    P  VT++  + AC +L     GK +H    +  +G
Sbjct: 323 GYVQNGEPEKAIAVFEKMLEE-GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF--- 560
            D  V N+LI+MY +C+ +  AS +F +       +WN MI  ++QN     AL  F   
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           + L  +P+  ++VS++ A  +L V RH K IHG +      +N F+++AL+DMYS C   
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG HG G  A++LF +M    + P   + +S++SAC
Sbjct: 502 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGLVDEGL+++ +M ++Y + P  +H+  +VD+LGR+G+++EA++FI+N+PI P   V
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 621

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +GA   AC  H + ++G++ A+ LF+L P+  GY++ L+N+Y +  +W    E+ K
Sbjct: 622 YGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRK 677



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 257/540 (47%), Gaps = 31/540 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L++ +S       +  +F    +K    ++ M+    +N  +   L F   M  + ++
Sbjct: 85  TKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVK 144

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF-----VNMYAKCGDLN 125
                   ++        LK+G+ +H       +I +S   NVF     VNMYAKC  ++
Sbjct: 145 PVVYNFTYLLKVCGDNADLKRGKEIH-----GQLITNSFAANVFAMTGVVNMYAKCRQID 199

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   D VSWNTI++G   N + +K L     M   G++ D+++L + + A+A
Sbjct: 200 DAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +G L  GK IH   I+ G+  +  V+++ +L  MYS+CG +E A   F GM  K VVSW
Sbjct: 260 DVGLLMVGKSIHGYAIRAGF--AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSW 317

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N+++DG+  NG+ E+A  +  +M L   ++P   T++  +  CAD   L  G+ VH +  
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKM-LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
           +  LG D+ +MNSL+  YSK   +  A  +FN +      VSWN+MI G           
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTH-VSWNAMILGYAQNGRVSEAL 435

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F EM  L  +    T+++++P+          K IH   ++     N     AL+ MY
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMY 495

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  L   IS +     WN +I     +G  + A+  F  M ++    P+ +T
Sbjct: 496 SKCGAIHMARKLFDMIS-DRHVITWNAMIDGYGTHGLGRAALDLFDKM-KKGAVEPNDIT 553

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            ++VISAC +  L  EG   H  ++K   GL+  + +  A++ + GR   IK A    E+
Sbjct: 554 YLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 232/474 (48%), Gaps = 21/474 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A++   T ++  Y+     + +  +F     +D+V+WN +I    +N      L    
Sbjct: 178 FAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVL 237

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M +EG R DS TL+ ++ A   +  L  G+ +H  +I+AG     ++     +MY+KCG
Sbjct: 238 RMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCG 297

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            + ++   F GM     VSWN++M G + N  PEK +  F +M   G     V++  A+ 
Sbjct: 298 SVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALH 357

Query: 183 ASACLGELSYGKVIHAL--GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           A A LG+L  GK +H     + LG +    +SV NSLISMYS+C  ++ A   F  +  +
Sbjct: 358 ACADLGDLERGKFVHKFVDQLNLGSD----ISVMNSLISMYSKCKRVDIASDIFNNLNGR 413

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSWNA+I G+A NG+  EA +   EM+ +  ++PD  T+V++I   A+  + R  + +
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSL-GMKPDSFTMVSVIPALAELSVTRHAKWI 472

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG  IR  L  ++ +  +L+D YSK  ++  A  LF+ I+  + +++WN+MI G      
Sbjct: 473 HGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRH-VITWNAMIDGYGTHGL 531

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVN 407
                 LF +M     + +  T L+++ +C+    ++ G +     +   G   +     
Sbjct: 532 GRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYG 591

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           A++ +    G +  A+  ++ +  +   + +     AC  + + +   K  K +
Sbjct: 592 AMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKL 645



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 158/296 (53%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  ST+L   YS     E++  +F     K VV+WN+M+   V+N      +  F
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+EEGI     T++  + A   +  L++G+ VH    +  + +D S+ N  ++MY+KC
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ +   F+ ++    VSWN ++ G   N    + L  F EM   G + D+ ++ S +
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L    + K IH L I+   + +  + VT +L+ MYS+CG I  A + F  ++ + 
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKN--IFVTTALVDMYSKCGAIHMARKLFDMISDRH 515

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V++WNA+IDG+  +G    A DL  +M+   +VEP+  T +++IS C+ S L+ EG
Sbjct: 516 VITWNAMIDGYGTHGLGRAALDLFDKMK-KGAVEPNDITYLSVISACSHSGLVDEG 570


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 221/720 (30%), Positives = 368/720 (51%), Gaps = 43/720 (5%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H L++ +G+          V+ Y+  G    +   F+   C D   WN+++      +
Sbjct: 27  TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-EDSPYVS 212
                L   R M  SG +    +     +A+A LG L  G  +HA  ++ G  E    V+
Sbjct: 87  DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SL+ MY++CG +  A R F  M  +DVV+W A+I G   NG+  E    L  ++++R
Sbjct: 147 VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYL--VRMVR 204

Query: 273 SV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           S       P+  T+ + +  C     L  G  +HG+ ++  +G+   +++SL   Y+K +
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCD 264

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           S   A +LF  + P  DLVSW S+I              LF  M     Q     +  +L
Sbjct: 265 STEDARILFPEL-PEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
               +   +  GK+ H   ++  F ++ +  NAL+ MY  C  +  A ++  R+ H  DT
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDT 382

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMT--QQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             W+ ++VA  + G   + ++ ++ M    +     D+ +L+++IS+C  L     G+S 
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSA 442

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H  ++K L G ++ V NALI+MYGRC +   A  +F      ++ TW+ +IS++S     
Sbjct: 443 HCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHS 502

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL L+  +  E   PN  ++VS++S+C  L  L HG+ IH HV  +G + +  I +AL
Sbjct: 503 KDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTAL 562

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C               +    W+ MIS YG HG+  +A++LF  M    ++P  
Sbjct: 563 VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNS 622

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + +++LSAC H+GLVD+G + +  M EEY + P  +H+ C+VD+LG+SG LQEA + + 
Sbjct: 623 LTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +PI+P  G+WG +L AC  H + +MG +VA+  F  +PEN GYYI +SN Y +  +W +
Sbjct: 682 AMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNE 741



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 168/658 (25%), Positives = 292/658 (44%), Gaps = 76/658 (11%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV--- 65
            ++SL+  Y+       ++ LF E   +DVV W A+I+ CV N     GL +   MV   
Sbjct: 147 VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSA 206

Query: 66  -EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
            + G R +S T+   + A   +  L  G  +H   +KAG+    S+ +   +MY KC   
Sbjct: 207 GDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDST 266

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F  +   D VSW +++       + EK +  F  M  SG Q D V +S  +A  
Sbjct: 267 EDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGL 326

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
               ++  GK  HA  ++  + DS  V + N+LISMY++C  ++ A   F  +  +D  S
Sbjct: 327 GNDAKVRGGKTFHAAIVRRNFGDS--VLIGNALISMYAKCKQVDIAATVFRMLHQRDTDS 384

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHG 302
           W++++  +   G   +  +L  EMQ     E +  T   +  + + S L  LR G+S H 
Sbjct: 385 WSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHC 444

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           Y+I+ L G +  + N+L+  Y +  +   A  +F  +    D+V+W+++IS         
Sbjct: 445 YSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK-TKDVVTWSALISSYSHLGHSK 503

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               L+ +ML    + + +TL++++ SC +  +LE G+ IH     +G   +     AL+
Sbjct: 504 DALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALV 563

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY+ CG L  A  +   +    D   WN++I     +G   +A+K F SM ++ N  P+
Sbjct: 564 DMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLF-SMMERGNVKPN 621

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           S+T + ++SAC +  L  +G+ L            TR++                    E
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELF-----------TRME--------------------E 650

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
                NL  + CM+    ++     A ++   +  EP+     ++L AC          +
Sbjct: 651 YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGAC----------K 700

Query: 591 IHGHVFHLGFQ--ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           +H + F +G +  + +F S    D Y    SN        +YG   K W  IE   +M
Sbjct: 701 MHDN-FEMGLRVAKKAFASDPENDGYYILMSN--------SYGSAEK-WNEIEKLRDM 748



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 225/473 (47%), Gaps = 22/473 (4%)

Query: 4   LAHLPTS-TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           + H P+  +SL + Y+     E +  LF E   KD+V+W ++I A          +  F 
Sbjct: 246 VGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFL 305

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M E G++ D   +  +++ L     ++ G+  H   ++        + N  ++MYAKC 
Sbjct: 306 GMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCK 365

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLSS 179
            ++ +   F  +H  DT SW++++          KCL  +REM +  +   + D  SL S
Sbjct: 366 QVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLIS 425

Query: 180 AVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +++ + LG L  G+  H   IK L  E+S   SV N+LISMY +CG+ + A + F  + 
Sbjct: 426 IISSCSRLGRLRLGQSAHCYSIKHLAGENS---SVANALISMYGRCGNFDVARKIFGMVK 482

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVV+W+A+I  ++  G  ++A  LL++  L   V+P+ AT+V++IS CA+   L  G 
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDAL-LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--GLF 356
            +H +     L  DL +  +L+D Y K   L  A  +F+++    D+V+WN MIS  G+ 
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE-RDVVTWNVMISGYGMH 600

Query: 357 KEMLYLCSQFSFS----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
            E +     FS            T LAIL +C     ++ G+ +     +     N    
Sbjct: 601 GEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHY 660

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             ++ +    G L  A  ++  +    D   W  ++ AC  + +F+  ++  K
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAK 713



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +    +L++ Y+     + +  +F     +D  +W++M+ A  +    +  L  
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           + EM    ++   +D+ +L+ I+S+ +++  L+ G+  HC SIK     +SS+ N  ++M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y +CG+ + +   F  +   D V+W+ ++S   H  + +  LL + +M   G + ++ +L
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +++ A L  L +G++IH+    +G E    +S+  +L+ MY +CG +  A + F  M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECD--LSICTALVDMYMKCGQLGIARKMFDSM 582

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+WN +I G+ ++G+  +A  L   M+   +V+P+  T + ++S C  + L+ +G
Sbjct: 583 LERDVVTWNVMISGYGMHGEAIQALKLFSMME-RGNVKPNSLTFLAILSACCHAGLVDKG 641

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           R +        L  +L     ++D   KS  L +AE + +A+    D   W +++
Sbjct: 642 RELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 226/730 (30%), Positives = 375/730 (51%), Gaps = 44/730 (6%)

Query: 85  QMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           +   + QGR +H    K         L    V MY KCG L+ +E  F  M      +WN
Sbjct: 92  KRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWN 151

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           T++   + N  P   L  +  M   G      S  + + A A L ++  G  +H+L +KL
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAF 262
           GY  + ++   N+L+SMY++  D+ AA R F G   K D V WN+I+  ++ +GK  E  
Sbjct: 212 GYHSTGFI--VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-GYDLLMMNSLMD 321
           +L  EM  M    P+  T+V+ ++ C      + G+ +H   ++      +L + N+L+ 
Sbjct: 270 ELFREMH-MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328

Query: 322 FYSKSNSLSKAELLFNAIAPMN--DLVSWNSMISGLFKEMLYLCSQFSFSTLLA------ 373
            Y++   + +AE +      MN  D+V+WNS+I G  + ++Y  +   FS ++A      
Sbjct: 329 MYTRCGKMPQAERILRQ---MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385

Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
                 I+ +     +L  G  +H + +K G+ +N    N L+ MY  C           
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           R+ H+ D   W  VI    QN    EA++ F+ + +++    D + L +++ A   L+  
Sbjct: 446 RM-HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSM 503

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
              K +H   L+  + LDT +QN L+ +YG+CR++  A+ VFES    ++ +W  MIS+ 
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           + N  E  A+ELFR +       + ++++ ILSA   L  L  G++IH ++   GF    
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I+ A++DMY+ C               K    ++SMI+AYG HG G  A+ELF +M + 
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            + P   S ++LL ACSH+GL+DEG  +   M  EY++ P  EH+VC+VDMLGR+  + E
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVE 742

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A+EF+K +  +P   VW A+L+AC  H + ++G+  A+ L +LEP+N G  + +SN++  
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802

Query: 770 LGRWKDAVEI 779
            GRW D  ++
Sbjct: 803 QGRWNDVEKV 812



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 209/798 (26%), Positives = 358/798 (44%), Gaps = 74/798 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      + +  +F E  ++    WN MI A V N      L  +  M  EG+   
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
            ++   ++ A  ++  ++ G  +H L +K G  +   + N  V+MYAK  DL+++   F 
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241

Query: 133 GMH-CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           G     D V WN+I+S    +    + L  FREM  +G   ++ ++ SA+ A        
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IHA  +K     S  + V N+LI+MY++CG +  AER    M   DVV+WN++I G
Sbjct: 302 LGKEIHASVLKSSTHSSE-LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N  ++EA +   +M +    + D  ++ ++I+       L  G  +H Y I+     
Sbjct: 361 YVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419

Query: 312 DLLMMNSLMDFYSKSN---SLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +L + N+L+D YSK N    + +A L  +      DL+SW ++I+G            LF
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHD----KDLISWTTVIAGYAQNDCHVEALELF 475

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +++     +     L +IL + +  +S+   K IHC  L+ G  +  I  N L+ +Y  C
Sbjct: 476 RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ-NELVDVYGKC 534

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            ++  A  + + I    D   W  +I +   NG+  EA++ F+ M  +   S DSV L+ 
Sbjct: 535 RNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALLC 592

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++SA  +L    +G+ +H   L+    L+  +  A++ MY  C D++SA  VF+      
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652

Query: 537 LCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK---Q 590
           L  +  MI+A+  +     A+ELF   RH    P+ IS +++L AC+  G+L  G+   +
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712

Query: 591 IHGHVFHLGFQENSFISSALLDM--YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           I  H + L      ++   L+DM   +NC                      +E F  +  
Sbjct: 713 IMEHEYELEPWPEHYV--CLVDMLGRANC---------------------VVEAFEFVKM 749

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRS 704
               PT     +LL+AC      + G      +LE   + P+   ++ +V  +    GR 
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE---LEPKNPGNLVLVSNVFAEQGRW 806

Query: 705 GKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
             +++    +K   ++  PG  W  M        D K+ K  A    K  PE+   Y  L
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEM--------DGKVHKFTAR--DKSHPESKEIYEKL 856

Query: 764 SNMYVALGRWKDAVEIGK 781
           S +   L R K   E+ +
Sbjct: 857 SEVTRKLEREKGKRELAR 874



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 225/490 (45%), Gaps = 27/490 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+       +  +  +  N DVVTWN++I   V+N      L FF +M+  G + 
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  ++  I++A  +++ L  G  +H   IK G  ++  + N  ++MY+KC         F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             MH  D +SW T+++G   N+   + L  FR++     + D + L S + AS+ L  + 
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             K IH   ++ G  D+    + N L+ +Y +C ++  A R F  +  KDVVSW ++I  
Sbjct: 505 IVKEIHCHILRKGLLDT---VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            ALNG   EA +L   M +   +  D   ++ ++S  A    L +GR +H Y +R+    
Sbjct: 562 SALNGNESEAVELFRRM-VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 620

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  +  +++D Y+    L  A+ +F+ I     L+ + SMI+             LF +M
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKM 679

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYI 414
            +        + LA+L +C+    L+ G+       H ++L+    +    V+ L     
Sbjct: 680 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR--A 737

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           NC  +V AF  ++ +        W  ++ AC  +   +      + + + +  +P ++ L
Sbjct: 738 NC--VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 795

Query: 475 V-NVISACGN 483
           V NV +  G 
Sbjct: 796 VSNVFAEQGR 805


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 218/702 (31%), Positives = 359/702 (51%), Gaps = 66/702 (9%)

Query: 139 TVSW-NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           T SW + + S    N++ E    Y  EM  SG + DN +  + + A + L +L  G+ IH
Sbjct: 57  TASWVDALRSRTRSNDFREAISTYI-EMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIH 115

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  +K GY  S  V+V N+L++MY +CG I    + F  +T +D VSWN+ I       K
Sbjct: 116 AAAVKFGYGSSS-VTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLL 314
           +E+A +    MQ M ++E    T+V++   C++  +   LR G+ +HGY++R +      
Sbjct: 175 WEQALEAFRAMQ-MENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR-VGDQKTF 232

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYL 362
             N+LM  Y+K   +  ++ LF +     D+VSWN+MIS              F+ M+  
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFESFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDLV 420
             +    T+ ++LP+C+  E L+ GK IH + L+      N+ +G +AL+ MY NC  + 
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG-SALVDMYCNCRQVE 350

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +   +   I        WN +I    +NG  ++A+  F  M +     P++ T+ +V+ A
Sbjct: 351 SGRRVFDHIL-GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 409

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C + E     +S+HG A+K     D  VQNAL+ MY R   +  + T+F+S    +  +W
Sbjct: 410 CVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSW 469

Query: 541 NCMISAFSQNKAEVRALELFRHLE--------------------FEPNEISIVSILSACT 580
           N MI+ +  +     AL L   ++                    ++PN I+++++L  C 
Sbjct: 470 NTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCA 529

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            L  +  GK+IH +        +  + SAL+DMY+ C               K+   W+ 
Sbjct: 530 ALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNV 589

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIR-----PTKSSVISLLSACSHSGLVDEGLQYYNN 680
           +I A G HGKG EA+ELF  M     R     P + + I++ +ACSHSGL+ EGL  +  
Sbjct: 590 LIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYR 649

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDT 739
           M  ++ V P ++H+ C+VD+LGR+G+L+EAYE +  +P +  K G W ++L AC  H + 
Sbjct: 650 MKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNV 709

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++G+  A+ L  LEP    +Y+ LSN+Y + G W  A+E+ K
Sbjct: 710 ELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRK 751



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 248/522 (47%), Gaps = 44/522 (8%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  Y           +F    ++D V+WN+ I A          L  F  M  E +
Sbjct: 131 ANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENM 190

Query: 70  RFDSTTLLIIV---SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              S TL+ +    S L  M+ L+ G+ +H  S++ G    +   N  + MYAK G ++ 
Sbjct: 191 ELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDD 249

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           S+  F      D VSWNT++S    ++   + L +FR M   G + D V+++S + A + 
Sbjct: 250 SKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 309

Query: 187 LGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           L  L  GK IHA  ++     E+S    V ++L+ MY  C  +E+  R F  +  + +  
Sbjct: 310 LERLDVGKEIHAYVLRNNDLIENS---FVGSALVDMYCNCRQVESGRRVFDHILGRRIEL 366

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WNA+I G+A NG  E+A  L  EM  +  + P+  T+ +++  C          S+HGYA
Sbjct: 367 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYA 426

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++     D  + N+LMD YS+   +  +E +F+++  + D VSWN+MI+G          
Sbjct: 427 VKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSME-VRDRVSWNTMITGYVLSGRYSNA 485

Query: 355 --LFKEMLYLCSQFSFS-----------------TLLAILPSCNSPESLEFGKSIHCWQL 395
             L  EM  + +                      TL+ +LP C +  ++  GK IH + +
Sbjct: 486 LVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAI 545

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           +   +++    +AL+ MY  CG L  +  +   +  N +   WN++I+AC  +G  +EA+
Sbjct: 546 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGEEAL 604

Query: 456 KTFKSMTQQQ----NASPDSVTLVNVISACGNLELAFEGKSL 493
           + FK+M  +      A P+ VT + V +AC +  L  EG +L
Sbjct: 605 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 646



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 190/362 (52%), Gaps = 21/362 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+ +L+  Y+ +   + S ALF    ++D+V+WN MI++  ++      L FF  MV EG
Sbjct: 233 TNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG 292

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSS 127
           +  D  T+  ++ A + +  L  G+ +H   ++   +I +S + +  V+MY  C  + S 
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASAC 186
              F  +       WN ++SG   N   EK L+ F EM   +G   +  +++S + A   
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
               S  + IH   +KLG+++  YV   N+L+ MYS+ G ++ +E  F  M  +D VSWN
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYVQ--NALMDMYSRMGKMDISETIFDSMEVRDRVSWN 470

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSV----------------EPDIATVVTLISLCAD 290
            +I G+ L+G++  A  LLHEMQ M +                 +P+  T++T++  CA 
Sbjct: 471 TMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAA 530

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              + +G+ +H YAIR +L  D+ + ++L+D Y+K   L+ +  +FN + P  ++++WN 
Sbjct: 531 LAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM-PNKNVITWNV 589

Query: 351 MI 352
           +I
Sbjct: 590 LI 591



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 25/330 (7%)

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           S +  T+ W   + + T++  F+EAI T+  MT    A PD+     V+ A   L+    
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMT-VSGARPDNFAFPAVLKAVSGLQDLKT 110

Query: 490 GKSLHGLALKSLMGLDT-RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           G+ +H  A+K   G  +  V N L+ MYG+C  I     VF+   + +  +WN  I+A  
Sbjct: 111 GEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALC 170

Query: 549 QNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGV---LRHGKQIHGHVFHLGFQE 602
           + +   +ALE FR ++ E  E+S   +VS+  AC+ LGV   LR GKQ+HG+   +G Q+
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQK 230

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
            +F ++AL+ MY+                 +   +W++MIS++    +  EA+  F  M 
Sbjct: 231 -TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 289

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
             G+     ++ S+L ACSH   +D G + +  +L   D+   +     +VDM     ++
Sbjct: 290 LEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQV 349

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +       ++ +  +  +W AM+S  + +G
Sbjct: 350 ESGRRVFDHI-LGRRIELWNAMISGYARNG 378



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 135/318 (42%), Gaps = 46/318 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L+  YS +   + S  +F     +D V+WN MIT  V +      L   
Sbjct: 430 GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLL 489

Query: 62  GEMVE-----------------EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM 104
            EM                      + ++ TL+ ++     +  + +G+ +H  +I+  +
Sbjct: 490 HEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNML 549

Query: 105 IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
            +D ++ +  V+MYAKCG LN S   F+ M   + ++WN ++  C  +   E+ L  F+ 
Sbjct: 550 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 609

Query: 165 M----GWSGEQADN-VSLSSAVAASACLGELSYG-----KVIHALGIKLGYEDSPYVSVT 214
           M    G  GE   N V+  +  AA +  G +S G     ++ H  G++      P     
Sbjct: 610 MVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE------PTSDHY 663

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCK--DVVSWNAIIDGFALNGKFE----EAFDLLHEM 268
             ++ +  + G +E A      M  +   V +W++++    ++   E     A +LLH  
Sbjct: 664 ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLH-- 721

Query: 269 QLMRSVEPDIATVVTLIS 286
                +EP++A+   L+S
Sbjct: 722 -----LEPNVASHYVLLS 734


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 311/598 (52%), Gaps = 33/598 (5%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           +N  +    + G +  A R F  M+ KD +SW  +I G+       EA  L   M++   
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +  D   +      C  +  +  G  +HGYA++  L   + + ++L+D Y+K+  + +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGR 171

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F+ + PM ++VSW ++I+GL            F EM     ++   T    L +C   
Sbjct: 172 RVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADS 230

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L +G+ IH   +K GF  ++   N L  MY  CG L    +L +++S   D   W  +
Sbjct: 231 GALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTI 289

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    Q G  + A++ F  M ++ + SP+  T   VIS C NL     G+ LH L L   
Sbjct: 290 ITTLVQMGQEECAVQAFIRM-RESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +     V+N+++TMY +C  + S+S +F      ++ +W+ +I+ + Q      A EL  
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLS 408

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +  E   P E ++ S+LSAC  + +L HGKQ+H +V  +G +  + + SAL++MY  C 
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468

Query: 619 S--------NAA-------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S        +AA       W++MI+ Y  HG   E I+LF ++   G+RP   + I +LS
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+GLVD G  Y+N M ++Y + P  EH+ C++D+L R+G+L +A   I+ +P     
Sbjct: 529 ACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VW  +L AC  HGD + G++ AE + +LEP   G +I+L+N+Y + G+W++A +I K
Sbjct: 589 VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRK 646



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 271/580 (46%), Gaps = 26/580 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-V 65
           LP S   L       +  ++  +F +   KD ++W  +I+  V        L  F  M V
Sbjct: 49  LPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRV 108

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           E G+R D   L +   A    + +  G ++H  ++K G++    + +  ++MY K G + 
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
                F  M   + VSW  I++G +   Y ++ L+YF EM  S  + D+ + + A+ A A
Sbjct: 169 EGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACA 228

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             G L+YG+ IHA  +K G++ S +V+  N+L +MY++CG +E     F  M+ +DVVSW
Sbjct: 229 DSGALNYGREIHAQAMKKGFDVSSFVA--NTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             II      G+ E A      M+    V P+  T   +IS CA+   +  G  +H   +
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMR-ESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
              L   L + NS+M  Y+K   L+ + ++F+ +    D+VSW+++I+G  +     E  
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIAGYXQGGHVSEAF 404

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L S             L ++L +C +   LE GK +H + L +G  +  + ++AL++MY
Sbjct: 405 ELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMY 464

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +    + N D   W  +I    ++G+ +E I  F+ +  +    PDSVT
Sbjct: 465 CKCGSIEEASRIFD-AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP-RVGLRPDSVT 522

Query: 474 LVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            + V+SAC   G ++L F     + ++ K  +         +I +  R   +  A  + E
Sbjct: 523 FIGVLSACSHAGLVDLGFH--YFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIE 580

Query: 531 SC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPN 568
           +  ++ +   W+ ++ A       E       R L+ EPN
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 243/506 (48%), Gaps = 18/506 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   ++LL  Y+          +F+E   ++VV+W A+IT  V        L +F
Sbjct: 146 GLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    + +DS T  I + A      L  GR +H  ++K G    S + N    MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L      F  M   D VSW TI++  +     E  +  F  M  S    +  + ++ +
Sbjct: 266 GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVI 325

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A L  + +G+ +HAL + LG   S  +SV NS+++MY++CG + ++   F  MT +D
Sbjct: 326 SGCANLARIEWGEQLHALILHLGLAAS--LSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW+ II G+   G   EAF+LL  M+ M   +P    + +++S C +  +L  G+ +H
Sbjct: 384 IVSWSTIIAGYXQGGHVSEAFELLSWMR-MEGPKPTEFALASVLSACGNMAILEHGKQLH 442

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y +   L +  +++++L++ Y K  S+ +A  +F+A A  +D+VSW +MI+G       
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDA-AENDDIVSWTAMINGYAEHGYS 501

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF+++  +  +    T + +L +C+    ++ G    +    K   S +      
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNA 467
           ++ +    G L  A  +++ +  + D   W+ ++ AC  +G  +   +T + + Q + N 
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621

Query: 468 SPDSVTLVNVISACGNLELAFEGKSL 493
           +   +TL N+ ++ G    A + + L
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKL 647



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 169/353 (47%), Gaps = 4/353 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF      + +L T Y+     E  L LF +   +DVV+W  +IT  V+       +  
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E  +  +  T   ++S    +  ++ G  +H L +  G+ A  S+ N  + MYAK
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L SS   F  M   D VSW+TI++G     +  +       M   G +    +L+S 
Sbjct: 366 CGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASV 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A   +  L +GK +HA  + +G E +    V ++LI+MY +CG IE A R F      
Sbjct: 426 LSACGNMAILEHGKQLHAYVLSIGLEHTAM--VLSALINMYCKCGSIEEASRIFDAAEND 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RS 299
           D+VSW A+I+G+A +G   E  DL  ++  +  + PD  T + ++S C+ + L+  G   
Sbjct: 484 DIVSWTAMINGYAEHGYSREVIDLFEKIPRV-GLRPDSVTFIGVLSACSHAGLVDLGFHY 542

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            +  + +  +         ++D   ++  LS AE +  A+    D V W++++
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLL 595


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 226/730 (30%), Positives = 375/730 (51%), Gaps = 44/730 (6%)

Query: 85  QMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           +   + QGR +H    K         L    V MY KCG L+ +E  F  M      +WN
Sbjct: 92  KRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWN 151

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           T++   + N  P   L  +  M   G      S  + + A A L ++  G  +H+L +KL
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAF 262
           GY  + ++   N+L+SMY++  D+ AA R F G   K D V WN+I+  ++ +GK  E  
Sbjct: 212 GYHSTGFI--VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-GYDLLMMNSLMD 321
           +L  EM  M    P+  T+V+ ++ C      + G+ +H   ++      +L + N+L+ 
Sbjct: 270 ELFREMH-MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328

Query: 322 FYSKSNSLSKAELLFNAIAPMN--DLVSWNSMISGLFKEMLYLCSQFSFSTLLA------ 373
            Y++   + +AE +      MN  D+V+WNS+I G  + ++Y  +   FS ++A      
Sbjct: 329 MYTRCGKMPQAERILRQ---MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385

Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
                 I+ +     +L  G  +H + +K G+ +N    N L+ MY  C           
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           R+ H+ D   W  VI    QN    EA++ F+ + +++    D + L +++ A   L+  
Sbjct: 446 RM-HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSM 503

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
              K +H   L+  + LDT +QN L+ +YG+CR++  A+ VFES    ++ +W  MIS+ 
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           + N  E  A+ELFR +       + ++++ ILSA   L  L  G++IH ++   GF    
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I+ A++DMY+ C               K    ++SMI+AYG HG G  A+ELF +M + 
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            + P   S ++LL ACSH+GL+DEG  +   M  EY++ P  EH+VC+VDMLGR+  + E
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVE 742

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A+EF+K +  +P   VW A+L+AC  H + ++G+  A+ L +LEP+N G  + +SN++  
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802

Query: 770 LGRWKDAVEI 779
            GRW D  ++
Sbjct: 803 QGRWNDVEKV 812



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 204/783 (26%), Positives = 355/783 (45%), Gaps = 69/783 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
            L+  Y      + +  +F E  ++    WN MI A V N      L  +  M  EG+  
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
             ++   ++ A  ++  ++ G  +H L +K G  +   + N  V+MYAK  DL+++   F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 132 SGMH-CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            G     D V WN+I+S    +    + L  FREM  +G   ++ ++ SA+ A       
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IHA  +K     S  + V N+LI+MY++CG +  AER    M   DVV+WN++I 
Sbjct: 301 KLGKEIHASVLKSSTHSSE-LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  N  ++EA +   +M +    + D  ++ ++I+       L  G  +H Y I+    
Sbjct: 360 GYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418

Query: 311 YDLLMMNSLMDFYSKSN---SLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +L + N+L+D YSK N    + +A L  +      DL+SW ++I+G            L
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD----KDLISWTTVIAGYAQNDCHVEALEL 474

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F+++     +     L +IL + +  +S+   K IHC  L+ G  +  I  N L+ +Y  
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ-NELVDVYGK 533

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           C ++  A  + + I    D   W  +I +   NG+  EA++ F+ M  +   S DSV L+
Sbjct: 534 CRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALL 591

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
            ++SA  +L    +G+ +H   L+    L+  +  A++ MY  C D++SA  VF+     
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651

Query: 536 NLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK--- 589
            L  +  MI+A+  +     A+ELF   RH    P+ IS +++L AC+  G+L  G+   
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +I  H + L      ++   L+DM                    G+    +E F  +   
Sbjct: 712 KIMEHEYELEPWPEHYV--CLVDML-------------------GRANCVVEAFEFVKMM 750

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSG 705
              PT     +LL+AC      + G      +LE   + P+   ++ +V  +    GR  
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE---LEPKNPGNLVLVSNVFAEQGRWN 807

Query: 706 KLQEAYEFIKNLPIQPKPGV-WGAMLSAC--------SHHGDTKMGKQVAELLFKLEPEN 756
            +++    +K   ++  PG  W  M            SH    ++ ++++E+  KLE E 
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE- 866

Query: 757 VGY 759
           VGY
Sbjct: 867 VGY 869


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 201/694 (28%), Positives = 350/694 (50%), Gaps = 55/694 (7%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  ++   + GDL ++      M   + VSWNT+++    ++ P + L  +R M   G  
Sbjct: 80  NAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
             N +L+S ++A   +  L  G+  H L +K+G + + +V   N L+ MY++CG +  A 
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVE--NGLLGMYTKCGSVADAV 197

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M+  + VS+ A++ G A +G  ++A  L   M    ++  D   V +++  CA +
Sbjct: 198 RLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMS-RSAIRVDPVAVSSVLGACAQA 256

Query: 292 --------LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
                     +R  +S+H   +R+    D  + NSL+D Y+K   + +A  +F +++ ++
Sbjct: 257 CAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVS 316

Query: 344 DLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            +VSWN +++G  +     C + +   L  +  S                    GF  N 
Sbjct: 317 -IVSWNILVTGYGQ---LGCYERALEVLDLMQES--------------------GFEPNE 352

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +  + ++   I   D+ +A ++  +IS  S T+ WN ++    Q    Q+ I+ F+ M Q
Sbjct: 353 VTYSNMLASCIKARDVPSARAMFDKISKPSVTT-WNTLLSGYGQEELHQDTIELFRRM-Q 410

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            QN  PD  TL  ++S C  L +   GK +H  ++K L+  D  V + LI MY +C  + 
Sbjct: 411 HQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVG 470

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACT 580
            A  +F      ++  WN MIS  + +     A + F+ +      P E S  S++++C 
Sbjct: 471 IAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCA 530

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
           +L  +  G+QIH  V   G+ +N ++ S+L+DMY+ C               K+  AW+ 
Sbjct: 531 RLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNE 590

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI  Y  +G G +A+ELF  M  +  +P   + I++L+ CSHSGLVDE + Y+N+M   Y
Sbjct: 591 MIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNY 650

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            +RP  EH+ C++D LGR+G+  E    I  +P +    +W  +L+AC  H + ++G+  
Sbjct: 651 GIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFA 710

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           A+ LF+L+P+N   Y+ LSN+Y  LGR  DA  +
Sbjct: 711 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAV 744



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/657 (24%), Positives = 295/657 (44%), Gaps = 88/657 (13%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +++ V+WN +I A   +      L  +  M++EG+   + TL  ++SA   +  L  GR 
Sbjct: 104 DRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRR 163

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
            H L++K G+  +  + N  + MY KCG +  +   F  M   + VS+  +M G   +  
Sbjct: 164 CHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGA 223

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVA--ASACLGELSYGKV------IHALGIKLGYE 206
            +  L  F  M  S  + D V++SS +   A AC G+ +  +       IHAL ++ G++
Sbjct: 224 VDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFD 283

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              +V   NSLI MY++   ++ A + F  M+   +VSWN ++ G+   G +E A ++L 
Sbjct: 284 SDQHVG--NSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLD 341

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            MQ     EP+  T   +++ C                                    K+
Sbjct: 342 LMQ-ESGFEPNEVTYSNMLASCI-----------------------------------KA 365

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A  +F+ I+  + + +WN+++SG            LF+ M +   Q   +TL  I
Sbjct: 366 RDVPSARAMFDKISKPS-VTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVI 424

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L +C+    LE GK +H   +KL   N+    + L+ MY  CG +  A  +   ++   D
Sbjct: 425 LSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER-D 483

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             CWN +I     +   +EA   FK M ++    P   +  ++I++C  L    +G+ +H
Sbjct: 484 VVCWNSMISGLAIHSLNEEAFDFFKQM-RENGMFPTESSYASMINSCARLSSIPQGRQIH 542

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              LK     +  V ++LI MY +C ++  A   F      N+  WN MI  ++QN    
Sbjct: 543 AQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGE 602

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           +A+ELF ++   + +P+ ++ +++L+ C+  G++         + +    E+++    L+
Sbjct: 603 KAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEA------IAYFNSMESNYGIRPLV 656

Query: 612 DMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSAC 665
           + Y         + +I A G  G+  E + +  +M      P K   I    LL+AC
Sbjct: 657 EHY---------TCLIDALGRAGRFAEVVAVIDKM------PYKDDAILWEVLLAAC 698



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 153/600 (25%), Positives = 272/600 (45%), Gaps = 89/600 (14%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P V   N+ IS   + GD+ AA      M  ++ VSWN +I   A +    EA ++   M
Sbjct: 74  PNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGM 133

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   + P   T+ +++S C     L +GR  HG A++  L  +  + N L+  Y+K  S
Sbjct: 134 -LQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFSTLL-------AILP 376
           ++ A  LF+ ++  N+ VS+ +M+ GL +     + L L ++ S S +        ++L 
Sbjct: 193 VADAVRLFDWMSSPNE-VSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLG 251

Query: 377 SC--------NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           +C        N   ++   +SIH   ++ GF ++    N+L+ MY     +  A  + + 
Sbjct: 252 ACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFES 311

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +S  S  S WNI++    Q G ++ A++    M Q+    P+ VT  N++++C       
Sbjct: 312 MSSVSIVS-WNILVTGYGQLGCYERALEVLDLM-QESGFEPNEVTYSNMLASC------- 362

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
                                        + RD+ SA  +F+     ++ TWN ++S + 
Sbjct: 363 ----------------------------IKARDVPSARAMFDKISKPSVTTWNTLLSGYG 394

Query: 549 QNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q +     +ELFR   H   +P+  ++  ILS C++LG+L  GKQ+H     L    + F
Sbjct: 395 QEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMF 454

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           ++S L+DMYS C               +    W+SMIS    H    EA + F +M  +G
Sbjct: 455 VASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENG 514

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQE 709
           + PT+SS  S++++C+    + +G Q +  +L++ YD          ++DM  + G + +
Sbjct: 515 MFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGS--SLIDMYAKCGNMDD 572

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL-----FKLEPENVGYYISLS 764
           A  F  N  I      W  M+   + +G    G++  EL       K +P++V +   L+
Sbjct: 573 ARLFF-NCMIVKNIVAWNEMIHGYAQNG---FGEKAVELFEYMLTTKQKPDSVTFIAVLT 628



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 191/385 (49%), Gaps = 12/385 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T +++L +        S+ A+F +     V TWN +++   +       +  F
Sbjct: 347 GFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELF 406

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + ++ D TTL +I+S  +++  L+ G+ VH  S+K  +  D  + +  ++MY+KC
Sbjct: 407 RRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKC 466

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  F+ M   D V WN+++SG   ++  E+   +F++M  +G      S +S +
Sbjct: 467 GQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMI 526

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A L  +  G+ IHA  +K GY+ + YV   +SLI MY++CG+++ A   F  M  K+
Sbjct: 527 NSCARLSSIPQGRQIHAQVLKDGYDQNVYVG--SSLIDMYAKCGNMDDARLFFNCMIVKN 584

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           +V+WN +I G+A NG  E+A +L  E  L    +PD  T + +++ C+ S L+ E  +  
Sbjct: 585 IVAWNEMIHGYAQNGFGEKAVELF-EYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYF 643

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y IR L+ +       L+D   ++   ++   + + +   +D + W  +++   
Sbjct: 644 NSMESNYGIRPLVEH----YTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACV 699

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSP 381
                   +F+   L  + P   SP
Sbjct: 700 VHHNAELGEFAAKHLFRLDPKNPSP 724



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 21/134 (15%)

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           N ++  +S +     AL  FR L   PN  S  + +SA  + G L   + + G +     
Sbjct: 49  NRLVELYSLSGLPCHALRAFRALP-RPNVYSYNAAISAACRAGDLAAARDLLGRMPD--- 104

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
                            ++  +W+++I+A        EA+E++  M   G+ PT  ++ S
Sbjct: 105 -----------------RNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLAS 147

Query: 661 LLSACSHSGLVDEG 674
           +LSAC     +D+G
Sbjct: 148 VLSACGAVAALDDG 161


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 365/723 (50%), Gaps = 49/723 (6%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H L++ +G+          V+ Y+  G    +   F+   C D   WN+++      +
Sbjct: 27  TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-EDSPYVS 212
                L   R M  SG +    +     +A+A LG L  G  +HA  ++ G  E    V+
Sbjct: 87  DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SL+ MY++CG +  A R F  M  +DVV+W A+I G   NG+  E    L  ++++R
Sbjct: 147 VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYL--VRMVR 204

Query: 273 SV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           S       P+  T+ + +  C     L  G  +HG+ ++  +G+   +++SL   Y+K +
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCD 264

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           S   A +LF  + P  DLVSW S+I              LF  M     Q     +  +L
Sbjct: 265 STEDARILFPEL-PEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
               +   +  GK+ H   ++  F ++ +  NAL+ MY  C  +  A ++  R+ H  DT
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDT 382

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT-----LVNVISACGNLELAFEG 490
             W+ ++VA  + G   + ++ ++ M  +     +  T     +++  S  G L L   G
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL---G 439

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           +S H  ++K L G ++ V NALI+MYGRC +   A  +F      ++ TW+ +IS++S  
Sbjct: 440 QSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHL 499

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL L+  +  E   PN  ++VS++S+C  L  L HG+ IH HV  +G + +  I 
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+DMY  C               +    W+ MIS YG HG+  +A++LF  M    ++
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVK 619

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   + +++LSAC H+GLVD+G + +  M EEY + P  +H+ C+VD+LG+SG LQEA +
Sbjct: 620 PNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAED 678

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            +  +PI+P  G+WG +L AC  H + +MG +VA+  F  +PEN GYYI +SN Y +  +
Sbjct: 679 VVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEK 738

Query: 773 WKD 775
           W +
Sbjct: 739 WNE 741



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 179/712 (25%), Positives = 317/712 (44%), Gaps = 83/712 (11%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV- 65
           +  ++SL+  Y+       ++ LF E   +DVV W A+I+ CV N     GL +   MV 
Sbjct: 145 VAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVR 204

Query: 66  ---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
              + G R +S T+   + A   +  L  G  +H   +KAG+    S+ +   +MY KC 
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCD 264

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  +   D VSW +++       + EK +  F  M  SG Q D V +S  +A
Sbjct: 265 STEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLA 324

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                 ++  GK  HA  ++  + DS  V + N+LISMY++C  ++ A   F  +  +D 
Sbjct: 325 GLGNDAKVRGGKTFHAAIVRRNFGDS--VLIGNALISMYAKCKQVDIAATVFRMLHQRDT 382

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSV 300
            SW++++  +   G   +  +L  EMQ     E +  T   +  + + S L  LR G+S 
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSA 442

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y+I+ L G +  + N+L+  Y +  +   A  +F  +    D+V+W+++IS       
Sbjct: 443 HCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK-TKDVVTWSALISSYSHLGH 501

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 L+ +ML    + + +TL++++ SC +  +LE G+ IH     +G   +     A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY+ CG L  A  +   +    D   WN++I     +G   +A+K F SM ++ N  
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLF-SMMERGNVK 619

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+S+T + ++SAC +  L  +G+ L            TR++                   
Sbjct: 620 PNSLTFLAILSACCHAGLVDKGRELF-----------TRME------------------- 649

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            E     NL  + CM+    ++     A ++   +  EP+     ++L AC         
Sbjct: 650 -EYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGAC--------- 699

Query: 589 KQIHGHVFHLGFQ--ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            ++H + F +G +  + +F S    D Y    SN        +YG   K W  IE   +M
Sbjct: 700 -KMHDN-FEMGLRVAKKAFASDPENDGYYILMSN--------SYGSAEK-WNEIEKLRDM 748

Query: 647 C-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
             N G+   KS   S +  C    + ++  Q+ +++ E+ + R  +   +CI
Sbjct: 749 MKNHGVE--KSIGWSTIDICGF--MKNQLTQWQHSLFEQSEFR--SSEDMCI 794



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 225/473 (47%), Gaps = 22/473 (4%)

Query: 4   LAHLPTS-TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           + H P+  +SL + Y+     E +  LF E   KD+V+W ++I A          +  F 
Sbjct: 246 VGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFL 305

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M E G++ D   +  +++ L     ++ G+  H   ++        + N  ++MYAKC 
Sbjct: 306 GMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCK 365

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLSS 179
            ++ +   F  +H  DT SW++++          KCL  +REM +  +   + D  SL S
Sbjct: 366 QVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLIS 425

Query: 180 AVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +++ + LG L  G+  H   IK L  E+S   SV N+LISMY +CG+ + A + F  + 
Sbjct: 426 IISSCSRLGRLRLGQSAHCYSIKHLAGENS---SVANALISMYGRCGNFDVARKIFGMVK 482

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVV+W+A+I  ++  G  ++A  LL++  L   V+P+ AT+V++IS CA+   L  G 
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDAL-LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--GLF 356
            +H +     L  DL +  +L+D Y K   L  A  +F+++    D+V+WN MIS  G+ 
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE-RDVVTWNVMISGYGMH 600

Query: 357 KEMLYLCSQFSFS----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
            E +     FS            T LAIL +C     ++ G+ +     +     N    
Sbjct: 601 GEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHY 660

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             ++ +    G L  A  ++  +    D   W  ++ AC  + +F+  ++  K
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAK 713



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +    +L++ Y+     + +  +F     +D  +W++M+ A  +    +  L  
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           + EM    ++   +D+ +L+ I+S+ +++  L+ G+  HC SIK     +SS+ N  ++M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y +CG+ + +   F  +   D V+W+ ++S   H  + +  LL + +M   G + ++ +L
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +++ A L  L +G++IH+    +G E    +S+  +L+ MY +CG +  A + F  M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECD--LSICTALVDMYMKCGQLGIARKMFDSM 582

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+WN +I G+ ++G+  +A  L   M+   +V+P+  T + ++S C  + L+ +G
Sbjct: 583 LERDVVTWNVMISGYGMHGEAIQALKLFSMME-RGNVKPNSLTFLAILSACCHAGLVDKG 641

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           R +        L  +L     ++D   KS  L +AE + +A+    D   W +++
Sbjct: 642 RELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 365/723 (50%), Gaps = 49/723 (6%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H L++ +G+          V+ Y+  G    +   F+   C D   WN+++      +
Sbjct: 27  TLHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS 86

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-EDSPYVS 212
                L   R M  SG +    +     +A+A LG L  G  +HA  ++ G  E    V+
Sbjct: 87  DFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVA 146

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SL+ MY++CG +  A R F  M  +DVV+W A+I G   NG+  E    L  ++++R
Sbjct: 147 VASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYL--VRMVR 204

Query: 273 SV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           S       P+  T+ + +  C     L  G  +HG+ ++  +G+   +++SL   Y+K +
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCD 264

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           S   A +LF  + P  DLVSW S+I              LF  M     Q     +  +L
Sbjct: 265 STEDARILFPEL-PEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLL 323

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
               +   +  GK+ H   ++  F ++ +  NAL+ MY  C  +  A ++  R+ H  DT
Sbjct: 324 AGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDT 382

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT-----LVNVISACGNLELAFEG 490
             W+ ++VA  + G   + ++ ++ M  +     +  T     +++  S  G L L   G
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRL---G 439

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           +S H  ++K L G ++ V NALI+MYGRC +   A  +F      ++ TW+ +IS++S  
Sbjct: 440 QSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHL 499

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL L+  +  E   PN  ++VS++S+C  L  L HG+ IH HV  +G + +  I 
Sbjct: 500 GHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSIC 559

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+DMY  C               +    W+ MIS YG HG+  +A++LF  M    ++
Sbjct: 560 TALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVK 619

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   + +++LSAC H+GLVD+G + +  M EEY + P  +H+ C+VD+LG+SG LQEA +
Sbjct: 620 PNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAED 678

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            +  +PI+P  G+WG +L AC  H + +MG +VA+  F  +PEN GYYI +SN Y +  +
Sbjct: 679 VVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEK 738

Query: 773 WKD 775
           W +
Sbjct: 739 WNE 741



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 179/712 (25%), Positives = 317/712 (44%), Gaps = 83/712 (11%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV- 65
           +  ++SL+  Y+       ++ LF E   +DVV W A+I+ CV N     GL +   MV 
Sbjct: 145 VAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVR 204

Query: 66  ---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
              + G R +S T+   + A   +  L  G  +H   +KAG+    S+ +   +MY KC 
Sbjct: 205 SAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCD 264

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  +   D VSW +++       + EK +  F  M  SG Q D V +S  +A
Sbjct: 265 STEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLA 324

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                 ++  GK  HA  ++  + DS  V + N+LISMY++C  ++ A   F  +  +D 
Sbjct: 325 GLGNDAKVRGGKTFHAAIVRRNFGDS--VLIGNALISMYAKCKQVDIAATVFRMLHQRDT 382

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSV 300
            SW++++  +   G   +  +L  EMQ     E +  T   +  + + S L  LR G+S 
Sbjct: 383 DSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSA 442

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y+I+ L G +  + N+L+  Y +  +   A  +F  +    D+V+W+++IS       
Sbjct: 443 HCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMV-KTKDVVTWSALISSYSHLGH 501

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 L+ +ML    + + +TL++++ SC +  +LE G+ IH     +G   +     A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY+ CG L  A  +   +    D   WN++I     +G   +A+K F SM ++ N  
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLER-DVVTWNVMISGYGMHGEAIQALKLF-SMMERGNVK 619

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+S+T + ++SAC +  L  +G+ L            TR++                   
Sbjct: 620 PNSLTFLAILSACCHAGLVDKGRELF-----------TRME------------------- 649

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            E     NL  + CM+    ++     A ++   +  EP+     ++L AC         
Sbjct: 650 -EYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGAC--------- 699

Query: 589 KQIHGHVFHLGFQ--ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            ++H + F +G +  + +F S    D Y    SN        +YG   K W  IE   +M
Sbjct: 700 -KMHDN-FEMGLRVAKKAFASDPENDGYYILMSN--------SYGSAEK-WNEIEKLRDM 748

Query: 647 C-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
             N G+   KS   S +  C    + ++  Q+ +++ E+ + R  +   +CI
Sbjct: 749 MKNHGVE--KSIGWSTIDICGF--MKNQLTQWQHSLFEQSEFR--SSEDMCI 794



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 225/473 (47%), Gaps = 22/473 (4%)

Query: 4   LAHLPTS-TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           + H P+  +SL + Y+     E +  LF E   KD+V+W ++I A          +  F 
Sbjct: 246 VGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFL 305

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M E G++ D   +  +++ L     ++ G+  H   ++        + N  ++MYAKC 
Sbjct: 306 GMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCK 365

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLSS 179
            ++ +   F  +H  DT SW++++          KCL  +REM +  +   + D  SL S
Sbjct: 366 QVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLIS 425

Query: 180 AVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +++ + LG L  G+  H   IK L  E+S   SV N+LISMY +CG+ + A + F  + 
Sbjct: 426 IISSCSRLGRLRLGQSAHCYSIKHLAGENS---SVANALISMYGRCGNFDVARKIFGMVK 482

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVV+W+A+I  ++  G  ++A  LL++  L   V+P+ AT+V++IS CA+   L  G 
Sbjct: 483 TKDVVTWSALISSYSHLGHSKDAL-LLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE 541

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--GLF 356
            +H +     L  DL +  +L+D Y K   L  A  +F+++    D+V+WN MIS  G+ 
Sbjct: 542 LIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE-RDVVTWNVMISGYGMH 600

Query: 357 KEMLYLCSQFSFS----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
            E +     FS            T LAIL +C     ++ G+ +     +     N    
Sbjct: 601 GEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHY 660

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             ++ +    G L  A  ++  +    D   W  ++ AC  + +F+  ++  K
Sbjct: 661 ACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAK 713



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 183/355 (51%), Gaps = 6/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +    +L++ Y+     + +  +F     +D  +W++M+ A  +    +  L  
Sbjct: 345 RNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLEL 404

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           + EM    ++   +D+ +L+ I+S+ +++  L+ G+  HC SIK     +SS+ N  ++M
Sbjct: 405 YREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISM 464

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y +CG+ + +   F  +   D V+W+ ++S   H  + +  LL + +M   G + ++ +L
Sbjct: 465 YGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +++ A L  L +G++IH+    +G E    +S+  +L+ MY +CG +  A + F  M
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECD--LSICTALVDMYMKCGQLGIARKMFDSM 582

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+WN +I G+ ++G+  +A  L   M+   +V+P+  T + ++S C  + L+ +G
Sbjct: 583 LERDVVTWNVMISGYGMHGEAIQALKLFSMME-RGNVKPNSLTFLAILSACCHAGLVDKG 641

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           R +        L  +L     ++D   KS  L +AE + +A+    D   W +++
Sbjct: 642 RELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 200/623 (32%), Positives = 332/623 (53%), Gaps = 38/623 (6%)

Query: 190 LSYGKVIHALGIKLGY--EDSPYVS-VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L   + +HAL + LG+     P+ S   + L+++Y   G ++ A   F  +  K +++WN
Sbjct: 43  LHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWN 102

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           AI+ G    G F +A    H M L   V PD  T   ++  C+    L+ GR VH   + 
Sbjct: 103 AILRGLVAVGHFTKAIHFYHSM-LQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMH 160

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                ++ +  +++D ++K  S+  A  +F  + P  DL SW ++I G            
Sbjct: 161 GKTKANVYVQCAVIDMFAKCGSVEDARRMFEEM-PDRDLASWTALICGTMWNGECLEALL 219

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF++M           + +ILP+C   E+++ G ++    ++ GF ++    NA++ MY 
Sbjct: 220 LFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYC 279

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CGD + A  +   + + SD   W+ +I   +QN  +QE+ K +  M     A+ +++  
Sbjct: 280 KCGDPLEAHRVFSHMVY-SDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLAT-NAIVA 337

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            +V+ A G LEL  +GK +H   LK  +  D  V +ALI MY  C  IK A ++FE   +
Sbjct: 338 TSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSD 397

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQI 591
            ++  WN MI  ++       A   FR +   E  PN I++VSIL  CTQ+G LR GK+I
Sbjct: 398 KDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEI 457

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HG+V   G   N  + ++L+DMYS C               ++   +++MISA G HG+G
Sbjct: 458 HGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQG 517

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            + +  + +M   G RP K + ISLLSACSH+GL+D G   YN+M+ +Y + P  EH+ C
Sbjct: 518 EKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSC 577

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD++GR+G L  AY+FI  +P+ P   V+G++L AC  H   ++ + +AE + +L+ ++
Sbjct: 578 MVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADD 637

Query: 757 VGYYISLSNMYVALGRWKDAVEI 779
            G+Y+ LSN+Y +  RW+D  ++
Sbjct: 638 SGHYVLLSNLYASGKRWEDMSKV 660



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 173/660 (26%), Positives = 307/660 (46%), Gaps = 52/660 (7%)

Query: 89  LKQGRVVHCLSIKAGMIA-----DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           L + R +H L +  G         SS  +  VN+Y   G L  +  TF  +     ++WN
Sbjct: 43  LHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWN 102

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            I+ G +   +  K + ++  M   G   DN +    + A + L  L  G+ +H     +
Sbjct: 103 AILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE---TM 159

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
             +    V V  ++I M+++CG +E A R F  M  +D+ SW A+I G   NG+  EA  
Sbjct: 160 HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALL 219

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L  +M+    + PD   V +++  C     ++ G ++   A+R     DL + N+++D Y
Sbjct: 220 LFRKMR-SEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMY 278

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL----------- 372
            K     +A  +F+ +   +D+VSW+++I+G  +  LY  S   +  ++           
Sbjct: 279 CKCGDPLEAHRVFSHMV-YSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVA 337

Query: 373 -AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            ++LP+    E L+ GK +H + LK G  ++ +  +AL+ MY NCG +  A S+ +  S 
Sbjct: 338 TSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTS- 396

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + D   WN +IV     G F+ A  TF+ +   ++  P+ +T+V+++  C  +    +GK
Sbjct: 397 DKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH-RPNFITVVSILPICTQMGALRQGK 455

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +HG   KS +GL+  V N+LI MY +C  ++    VF+     N+ T+N MISA   + 
Sbjct: 456 EIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHG 515

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              + L  +  ++ E   PN+++ +S+LSAC+  G+L  G  ++          NS I+ 
Sbjct: 516 QGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLY----------NSMIND 565

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                Y    +   +S M+   G  G    A +    M    + P  +   SLL AC   
Sbjct: 566 -----YGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRM---PMTPDANVFGSLLGACRLH 617

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK----LQEAYEFIKNLPIQPKPG 724
             V+        +L+   ++ +   H  ++  L  SGK    + +    IK+  ++ KPG
Sbjct: 618 NKVELTELLAERILQ---LKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPG 674



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 263/530 (49%), Gaps = 22/530 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ++ L+  Y N    + +   F    +K ++ WNA++   V        +HF+  M++ G+
Sbjct: 70  ASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGV 129

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D+ T  +++ A + ++ L+ GR VH  ++     A+  +    ++M+AKCG +  +  
Sbjct: 130 TPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARR 188

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D  SW  ++ G + N    + LL FR+M   G   D+V ++S + A   L  
Sbjct: 189 MFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEA 248

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G  +    ++ G+E   YVS  N++I MY +CGD   A R F  M   DVVSW+ +I
Sbjct: 249 VKLGMALQVCAVRSGFESDLYVS--NAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLI 306

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G++ N  ++E++ L   M +   +  +     +++       LL++G+ +H + ++  L
Sbjct: 307 AGYSQNCLYQESYKLYIGM-INVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGL 365

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FK 357
             D+++ ++L+  Y+   S+ +AE +F   +   D++ WNSMI G             F+
Sbjct: 366 MSDVVVGSALIVMYANCGSIKEAESIFECTSD-KDIMVWNSMIVGYNLVGDFESAFFTFR 424

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            +     + +F T+++ILP C    +L  GK IH +  K G   N    N+L+ MY  CG
Sbjct: 425 RIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCG 484

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L     + +++   + T+ +N +I AC  +G  ++ +  ++ M ++ N  P+ VT +++
Sbjct: 485 FLELGEKVFKQMMVRNVTT-YNTMISACGSHGQGEKGLAFYEQMKEEGN-RPNKVTFISL 542

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           +SAC +  L   G  L+   +    G++  +++   ++ + GR  D+  A
Sbjct: 543 LSACSHAGLLDRGWLLYNSMINDY-GIEPNMEHYSCMVDLIGRAGDLDGA 591



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 219/448 (48%), Gaps = 19/448 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++  ++     E +  +F E  ++D+ +W A+I   + N   +  L  F +M  EG+  
Sbjct: 172 AVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMP 231

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS  +  I+ A  ++  +K G  +   ++++G  +D  + N  ++MY KCGD   +   F
Sbjct: 232 DSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVF 291

Query: 132 SGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           S M  +D VSW+T+++G   N  Y E   LY   +   G   + +  +S + A   L  L
Sbjct: 292 SHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMIN-VGLATNAIVATSVLPALGKLELL 350

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   +K G      V V ++LI MY+ CG I+ AE  F   + KD++ WN++I 
Sbjct: 351 KQGKEMHNFVLKEGLMSD--VVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIV 408

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+ L G FE AF     +       P+  TVV+++ +C     LR+G+ +HGY  +  LG
Sbjct: 409 GYNLVGDFESAFFTFRRIWGAEH-RPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLG 467

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKE 358
            ++ + NSL+D YSK   L   E +F  +   N + ++N+MIS              +++
Sbjct: 468 LNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRN-VTTYNTMISACGSHGQGEKGLAFYEQ 526

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCG 417
           M    ++ +  T +++L +C+    L+ G  ++   +   G   N    + ++ +    G
Sbjct: 527 MKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAG 586

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           DL  A+  + R+    D + +  ++ AC
Sbjct: 587 DLDGAYKFITRMPMTPDANVFGSLLGAC 614



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 5/297 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  S +++  Y        +  +F      DVV+W+ +I    +N         +
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLY 322

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G+  ++     ++ AL ++  LKQG+ +H   +K G+++D  + +  + MYA C
Sbjct: 323 IGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANC 382

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSA 180
           G +  +E  F      D + WN+++ G       E     FR + W  E   N +++ S 
Sbjct: 383 GSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRI-WGAEHRPNFITVVSI 441

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     +G L  GK IH    K G   +  VSV NSLI MYS+CG +E  E+ F  M  +
Sbjct: 442 LPICTQMGALRQGKEIHGYVTKSGLGLN--VSVGNSLIDMYSKCGFLELGEKVFKQMMVR 499

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +V ++N +I     +G+ E+      +M+      P+  T ++L+S C+ + LL  G
Sbjct: 500 NVTTYNTMISACGSHGQGEKGLAFYEQMK-EEGNRPNKVTFISLLSACSHAGLLDRG 555


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 217/737 (29%), Positives = 365/737 (49%), Gaps = 36/737 (4%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +T L  +  A +  + ++Q R VH   I  GM    +  +  + +Y  CG    +   F 
Sbjct: 11  TTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFF 70

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +     + WN ++ G     + +  LL++ +M  S    D  +    + A   L  +  
Sbjct: 71  ELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 130

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
             V+H     LG+    +    ++LI +Y+  G I  A R F  +  +D + WN ++ G+
Sbjct: 131 CMVVHDTARSLGFHVDLFAG--SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGY 188

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G F+ A     EM+   S+   + T   ++S+CA       G  +HG  I     +D
Sbjct: 189 VKSGDFDNAIGTFCEMRTSYSMVNSV-TYTCILSICATRGNFCAGTQLHGLVIGSGFEFD 247

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             + N+L+  YSK  +L  A  LFN + P  D V+WN +I+G            LF  M+
Sbjct: 248 PQVANTLVAMYSKCGNLLYARKLFNTM-PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMI 306

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               +    T  + LPS     SL   K +H + ++     +    +AL+ +Y   GD+ 
Sbjct: 307 SAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVE 366

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + Q+ +   D +    +I     +G   +AI TF+ + Q+   + +S+T+ +V+ A
Sbjct: 367 MARKIFQQ-NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT-NSLTMASVLPA 424

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C  +     GK LH   LK  +     V +A+  MY +C  +  A   F    + +   W
Sbjct: 425 CAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCW 484

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N MIS+FSQN     A++LFR +       + +S+ S LSA   L  L +GK++HG+V  
Sbjct: 485 NSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIR 544

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
             F  ++F++S L+DMYS C               K+  +W+S+I+AYG HG   E ++L
Sbjct: 545 NAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDL 604

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           +HEM  +GI P   + + ++SAC H+GLVDEG+ Y++ M  EY +    EH+ C+VD+ G
Sbjct: 605 YHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYG 664

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G++ EA++ IK++P  P  GVWG +L AC  HG+ ++ K  +  L +L+P+N GYY+ 
Sbjct: 665 RAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVL 724

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN++   G W   +++
Sbjct: 725 LSNVHADAGEWASVLKV 741



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 184/678 (27%), Positives = 309/678 (45%), Gaps = 39/678 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S+ +L  Y     F  +  LF+E   +  + WN MI            L F+ +M+   +
Sbjct: 49  SSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNV 108

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  T   ++ A   +N +    VVH  +   G   D    +  + +YA  G +  +  
Sbjct: 109 SPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARR 168

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   DT+ WN ++ G + +   +  +  F EM  S    ++V+ +  ++  A  G 
Sbjct: 169 VFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGN 228

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              G  +H L I  G+E  P   V N+L++MYS+CG++  A + F  M   D V+WN +I
Sbjct: 229 FCAGTQLHGLVIGSGFEFDP--QVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLI 286

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+  NG  +EA  L + M +   V+PD  T  + +    +S  LR  + VH Y +R  +
Sbjct: 287 AGYVQNGFTDEAAPLFNAM-ISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRV 345

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
            +D+ + ++L+D Y K   +  A  +F     + D+    +MISG     L + +  +F 
Sbjct: 346 PFDVYLKSALIDVYFKGGDVEMARKIFQQNI-LVDVAVCTAMISGYVLHGLNIDAINTFR 404

Query: 370 ------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       T+ ++LP+C +  +L+ GK +HC  LK    N     +A+  MY  CG
Sbjct: 405 WLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG 464

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A+   +R+S + D+ CWN +I + +QNG  + AI  F+ M     A  DSV+L + 
Sbjct: 465 RLDLAYEFFRRMS-DRDSVCWNSMISSFSQNGKPEIAIDLFRQMG-MSGAKFDSVSLSSA 522

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SA  NL   + GK +HG  +++    DT V + LI MY +C ++  A  VF      N 
Sbjct: 523 LSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNE 582

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN +I+A+  +      L+L+  +      P+ ++ + I+SAC   G++  G     H
Sbjct: 583 VSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGI----H 638

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
            FH   +E           Y        ++ M+  YG  G+  EA +    M      P 
Sbjct: 639 YFHCMTRE-----------YGIGARMEHYACMVDLYGRAGRVHEAFDTIKSM---PFTPD 684

Query: 655 KSSVISLLSACSHSGLVD 672
                +LL AC   G V+
Sbjct: 685 AGVWGTLLGACRLHGNVE 702



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 276/596 (46%), Gaps = 31/596 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   ++L+  Y++  Y   +  +F E   +D + WN M+   V++      +  F
Sbjct: 142 GFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTF 201

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM       +S T   I+S          G  +H L I +G   D  + N  V MY+KC
Sbjct: 202 CEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKC 261

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F+ M   DTV+WN +++G + N + ++    F  M  +G + D+V+ +S +
Sbjct: 262 GNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 321

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +    G L + K +H+  ++      P+ V + ++LI +Y + GD+E A + F      
Sbjct: 322 PSILESGSLRHCKEVHSYIVR---HRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILV 378

Query: 241 DVVSWNAIIDGFALNGKFEEAFD----LLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           DV    A+I G+ L+G   +A +    L+ E  +  S+     T+ +++  CA    L+ 
Sbjct: 379 DVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSL-----TMASVLPACAAVAALKP 433

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ +H + +++ L   + + +++ D Y+K   L  A   F  ++   D V WNSMIS   
Sbjct: 434 GKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD-RDSVCWNSMISSFS 492

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF++M    ++F   +L + L +  +  +L +GK +H + ++  FS++T 
Sbjct: 493 QNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTF 552

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             + L+ MY  CG+L  A+ +   +   ++ S WN +I A   +G  +E +  +  M  +
Sbjct: 553 VASTLIDMYSKCGNLALAWCVFNLMDGKNEVS-WNSIIAAYGNHGCPRECLDLYHEML-R 610

Query: 465 QNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
               PD VT + +ISACG+  L  EG    H +  +  +G        ++ +YGR   + 
Sbjct: 611 AGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVH 670

Query: 524 SA-STVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
            A  T+    +  +   W  ++ A       E+  L     LE +P       +LS
Sbjct: 671 EAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 726


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 218/723 (30%), Positives = 377/723 (52%), Gaps = 45/723 (6%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           VVH   I  G+  D+ L N+ +N+Y++ G +  +   F  M   + VSW+T++S C H+ 
Sbjct: 65  VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK----VIHALGIKLGYEDSP 209
             E+ L+ F E   + + + N  + S+    AC G    G+     + +  +K G++   
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFI-QACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           YV     LI  Y + G+I+ A   F  +  K  V+W  +I G    G+   +  L +++ 
Sbjct: 184 YVGTL--LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL- 240

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +  +V PD   + T++S C+    L  G+ +H + +R  L  D  +MN L+D Y K   +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL---CSQFSFSTLL----AILPS 377
             A  LFN + P  +++SW +++SG     L KE + L    S+F     +    +IL S
Sbjct: 301 IAAHKLFNGM-PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C S  +L FG  +H + +K    N++   N+L+ MY  C  L  A  +   I   +D   
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVL 418

Query: 438 WNIVIVACTQNG---HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
           +N +I   ++ G      EA+  F+ M + +   P  +T V+++ A  +L      K +H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           GL  K  + LD    +ALI +Y  C  +K +  VF+     +L  WN M + + Q     
Sbjct: 478 GLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537

Query: 555 RALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL LF  L+     P+E +  ++++A   L  ++ G++ H  +   G + N +I++ALL
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597

Query: 612 DMYSNCKS---------NAA------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C S         +AA      W+S+IS+Y  HG+G +A+++  +M + GI P   
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + + +LSACSH+GLV++GL+ +  ML  + + PETEH+VC+V +LGR+G+L +A E I+ 
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P +P   VW ++LS C+  G+ ++ +  AE+    +P++ G +  LSN+Y + G W +A
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776

Query: 777 VEI 779
            ++
Sbjct: 777 KKV 779



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 185/693 (26%), Positives = 320/693 (46%), Gaps = 64/693 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC----VENRCVVMGLHFFGEMV 65
           S  L+  YS       +  +F +   +++V+W+ M++AC    +    +V+ L F+    
Sbjct: 82  SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW---- 137

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLK-QGR----VVHCLSIKAGMIADSSLCNVFVNMYAK 120
               R DS    I+ S +   + L  +GR     +    +K+G   D  +  + ++ Y K
Sbjct: 138 --RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G+++ +   F  +    TV+W T++SGC+        L  F ++       D   LS+ 
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A + L  L  GK IHA  ++ G E     S+ N LI  Y +CG + AA + F GM  K
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMD--ASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +++SW  ++ G+  N   +EA +L   M     ++PD+    ++++ CA    L  G  V
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASLHALGFGTQV 372

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y I+  LG D  + NSL+D Y+K + L+ A  +F+  A   D+V +N+MI G      
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA-DVVLFNAMIEGYSRLGT 431

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +F++M +   + S  T +++L +  S  SL   K IH    K G + +   
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL+ +Y NC  L  +  +   +    D   WN +     Q    +EA+  F  + Q  
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLS 549

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD  T  N+++A GNL     G+  H   LK  +  +  + NAL+ MY +C   + A
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQL 582
              F+S  + ++  WN +IS+++ +    +AL++   +     EPN I+ V +LSAC+  
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G +    +   G +  +                  +  M+S  G  G+  +A EL
Sbjct: 670 GLVEDGLKQFELMLRFGIEPET----------------EHYVCMVSLLGRAGRLNKAREL 713

Query: 643 FHEMCNSGIRPTKSSVI---SLLSACSHSGLVD 672
             +M      PTK + I   SLLS C+ +G V+
Sbjct: 714 IEKM------PTKPAAIVWRSLLSGCAKAGNVE 740



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 262/545 (48%), Gaps = 21/545 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   T L+  Y      + +  +F     K  VTW  MI+ CV+     + L  F
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++E+ +  D   L  ++SA + +  L+ G+ +H   ++ G+  D+SL NV ++ Y KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + ++   F+GM   + +SW T++SG   N   ++ +  F  M   G + D  + SS +
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A L  L +G  +HA  IK    +  Y  VTNSLI MY++C  +  A + F      D
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSY--VTNSLIDMYAKCDCLTDARKVFDIFAAAD 415

Query: 242 VVSWNAIIDGFALNG---KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           VV +NA+I+G++  G   +  EA ++  +M+  R + P + T V+L+   A    L   +
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRF-RLIRPSLLTFVSLLRASASLTSLGLSK 474

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
            +HG   +  L  D+   ++L+D YS    L  + L+F+ +  + DLV WNSM +G  ++
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQ 533

Query: 359 M-------LYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   L+L  Q S       T   ++ +  +  S++ G+  HC  LK G   N    
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ MY  CG    A       + + D  CWN VI +   +G  ++A++  + M   + 
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKM-MSEG 651

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             P+ +T V V+SAC +  L  +G     L L+  +  +T     ++++ GR   +  A 
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAR 711

Query: 527 TVFES 531
            + E 
Sbjct: 712 ELIEK 716



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 192/421 (45%), Gaps = 43/421 (10%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+ L A   LL     VHG  I   L  D  + N L++ YS++  +  A  +F  + P  
Sbjct: 50  LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM-PER 108

Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFST--------LLAILPSCNSPESLEFGK-- 388
           +LVSW++M+S     G+++E L +  +F  +         L + + +C+  +    G+  
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWM 166

Query: 389 --SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
              +  + +K GF  +      L+  Y+  G++  A  +   +   S T  W  +I  C 
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS-TVTWTTMISGCV 225

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           + G    +++ F  +  + N  PD   L  V+SAC  L     GK +H   L+  + +D 
Sbjct: 226 KMGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE-- 564
            + N LI  Y +C  + +A  +F    N N+ +W  ++S + QN     A+ELF  +   
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344

Query: 565 -FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK----- 618
             +P+  +  SIL++C  L  L  G Q+H +        +S+++++L+DMY+ C      
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404

Query: 619 ----------SNAAWSSMISAYGYHGKGW---EAIELFHEMCNSGIRPTKSSVISLLSAC 665
                         +++MI  Y   G  W   EA+ +F +M    IRP+  + +SLL A 
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464

Query: 666 S 666
           +
Sbjct: 465 A 465



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +   + +LL  Y+     E +   F    ++DVV WN++I++   +      L  
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +M+ EGI  +  T + ++SA +    ++ G     L ++ G+  ++      V++  +
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGR 703

Query: 121 CGDLNSSECTFSGMHCAD-TVSWNTIMSGC 149
            G LN +      M      + W +++SGC
Sbjct: 704 AGRLNKARELIEKMPTKPAAIVWRSLLSGC 733


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 208/687 (30%), Positives = 358/687 (52%), Gaps = 53/687 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  ++   + +N   + +L + +M   G + DN +  + + A A L ++  GK IHA   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 202 KLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           K GY  DS  V+V N+L+++Y +CGD  A  + F  ++ ++ VSWN++I       K+E 
Sbjct: 125 KFGYGVDS--VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLLMMN 317
           A +    M L  +VEP   T+V++++ C++  +   L  G+ VH Y +R+    +  ++N
Sbjct: 183 ALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  Y K   L+ +++L  +     DLV+WN+++S L             +EM+    +
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFS 424
               T+ ++LP+C+  E L  GK +H + LK G    N+   +AL+ MY NC  +++   
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   +  +     WN +I   +QN H +EA+  F  M +      +S T+  V+ AC   
Sbjct: 360 VFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                 +++HG  +K  +  D  VQN L+ MY R   I  A  +F    + +L TWN MI
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478

Query: 545 SAFSQNKAEVRALELFRHLE--------------FEPNEISIVSILSACTQLGVLRHGKQ 590
           + +  ++    AL L   ++               +PN I++++IL +C  L  L  GK+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH +        +  + SAL+DMY+ C               K+   W+ +I AYG HG 
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G EAI+L   M   G++P + + IS+ +ACSHSG+VDEGL+ +  M  +Y V P ++H+ 
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           C+VD+LGR+G+++EAY+ +  +P    K G W ++L A   H + ++G+  A+ L +LEP
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
               +Y+ L+N+Y + G W  A E+ +
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRR 745



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 166/602 (27%), Positives = 272/602 (45%), Gaps = 59/602 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +L+  Y     F +   +F     ++ V+WN++I++        M L  F  M++E 
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194

Query: 69  IRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           +   S TL+ +V+A   L     L  G+ VH   ++ G + +S + N  V MY K G L 
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLA 253

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           SS+         D V+WNT++S    N    + L Y REM   G + D  ++SS + A +
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L  L  GK +HA  +K G  D     V ++L+ MY  C  + +  R F GM  + +  W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA+I G++ N   +EA  L   M+    +  +  T+  ++  C  S       ++HG+ +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKE-----M 359
           +R L  D  + N+LMD YS+   +  A  +F  +    DLV+WN+MI+G +F E     +
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDAL 491

Query: 360 LYL-------------CSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           L L              S+ S      TL+ ILPSC +  +L  GK IH + +K   + +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +AL+ MY  CG L  +  +  +I    +   WN++I+A   +G+ QEAI   + M 
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLR-MM 609

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG---------------KSLHGLALKSLMGLDTR 507
             Q   P+ VT ++V +AC +  +  EG                S H   +  L+G   R
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFE 566
           ++ A   M    RD   A              W+ ++ A    N  E+  +     ++ E
Sbjct: 670 IKEAYQLMNMMPRDFNKAG------------AWSSLLGASRIHNNLEIGEIAAQNLIQLE 717

Query: 567 PN 568
           PN
Sbjct: 718 PN 719



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/735 (23%), Positives = 338/735 (45%), Gaps = 71/735 (9%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           W  ++ + V +  +   +  + +M+  GI+ D+     ++ A+  +  ++ G+ +H    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 101 KAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           K G   DS ++ N  VN+Y KCGD  +    F  +   + VSWN+++S        E  L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNS 216
             FR M     +  + +L S V A + L     L  GK +HA G++ G  +S    + N+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINT 241

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L++MY + G + +++        +D+V+WN ++     N +  EA + L EM ++  VEP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEP 300

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           D  T+ +++  C+   +LR G+ +H YA++   L  +  + ++L+D Y     +     +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA-ILPSCNSPE 382
           F+ +     +  WN+MI+G            LF  M       + ST +A ++P+C    
Sbjct: 361 FDGMFD-RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +    ++IH + +K G   +    N LM MY   G +  A  +  ++  + D   WN +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 478

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNA----------SPDSVTLVNVISACGNLELAFEGKS 492
                + H ++A+     M   +             P+S+TL+ ++ +C  L    +GK 
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  A+K+ +  D  V +AL+ MY +C  ++ +  VF+     N+ TWN +I A+  +  
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              A++L R +  +   PNE++ +S+ +AC+  G++  G +I    F++           
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI----FYV----------- 643

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           +   Y    S+  ++ ++   G  G+  EA +L + M     +    S  SLL A     
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS--SLLGASRIHN 701

Query: 670 LVDEGLQYYNNMLEEYDVRPET-EHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGV 725
            ++ G     N+++   + P    H+V + ++   +G   +A E  +N+    ++ +PG 
Sbjct: 702 NLEIGEIAAQNLIQ---LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG- 757

Query: 726 WGAMLSACS--HHGD 738
                  CS   HGD
Sbjct: 758 -------CSWIEHGD 765


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 226/720 (31%), Positives = 365/720 (50%), Gaps = 37/720 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+  R  + L I  G+  +  + +  ++ YA  G  N S   F  +   D   WN+I+  
Sbjct: 40  LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    + L +F  M  SG+  D+ +    V+A A L     G  +H L +K G  D 
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
              +V  S +  YS+CG ++ A   F  M  +DVV+W AII G   NG+ E     L +M
Sbjct: 160 N-TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218

Query: 269 QLMRSV--EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
               S   +P+  T+      C++   L+EGR +HG+A++  L     + +S+  FYSKS
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAI 374
            + S+A L F  +    D+ SW S+I+ L            F EM           +  +
Sbjct: 279 GNPSEAYLSFRELGD-EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +        +  GK+ H + ++  FS ++   N+L+ MY     L  A  L  RIS   +
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN ++    +     + I+ F+ + Q      DS +  +VIS+C ++     GKSLH
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKI-QNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              +K+ + L   V N+LI +YG+  D+  A  +F    + N+ TWN MI+++   +   
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSE 515

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           +A+ LF  +    F+P+ I++V++L AC   G L  G+ IH ++     + N  +S+AL+
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C               K    W+ MIS YG HG    AI LF +M  S ++PT  
Sbjct: 576 DMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 635

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + ++LLSAC+H+GLV++G + +  M  +YDV+P  +H+ C+VD+L RSG L+EA   + +
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMS 694

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P  P   +WG +LS+C  HG+ +MG ++AE     +P+N GYYI L+NMY A G+W++A
Sbjct: 695 MPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEA 754



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 177/634 (27%), Positives = 304/634 (47%), Gaps = 25/634 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  ++ L+++Y++      S  +F+    +D+  WN++I A   N      L FF
Sbjct: 54  GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAK 120
             M+  G   D  T  ++VSA  ++     G  VH L +K  G   ++++   FV  Y+K
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SL 177
           CG L  +   F  M   D V+W  I+SG + N   E  L Y  +M  +G   D     +L
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
                A + LG L  G+ +H   +K G   S +V   +S+ S YS+ G+   A  +F  +
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ--SSMFSFYSKSGNPSEAYLSFREL 291

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D+ SW +II   A +G  EE+FD+  EMQ  + + PD   +  LI+     +L+ +G
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLVPQG 350

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           ++ HG+ IR     D  + NSL+  Y K   LS AE LF  I+   +  +WN+M+ G   
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+++  L  +   ++  +++ SC+   ++  GKS+HC+ +K         
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           VN+L+ +Y   GDL  A+ +      N  T  WN +I +       ++AI  F  M   +
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCEADTNVIT--WNAMIASYVHCEQSEKAIALFDRMV-SE 527

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N  P S+TLV ++ AC N      G+ +H    ++   ++  +  ALI MY +C  ++ +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             +F++    +   WN MIS +  +     A+ LF  +E    +P   + +++LSACT  
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           G++  GK++   +     + N    S L+D+ S 
Sbjct: 648 GLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSR 681



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 234/504 (46%), Gaps = 33/504 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +S+ + YS       +   F E  ++D+ +W ++I +   +  +      F EM  +G+ 
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D   +  +++ L +M  + QG+  H   I+     DS++CN  ++MY K   L+ +E  
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388

Query: 131 FSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           F  +    +  +WNT++ G        KC+  FR++   G + D+ S +S +++ + +G 
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK---DVVSWN 246
           +  GK +H   +K   + +  +SV NSLI +Y + GD+  A    W M C+   +V++WN
Sbjct: 449 VLLGKSLHCYVVKTSLDLT--ISVVNSLIDLYGKMGDLTVA----WRMFCEADTNVITWN 502

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I  +    + E+A  L   M +  + +P   T+VTL+  C ++  L  G+ +H Y   
Sbjct: 503 AMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE 561

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                +L +  +L+D Y+K   L K+  LF+A     D V WN MISG            
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIA 620

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF +M     + +  T LA+L +C     +E GK +     +     N    + L+ +  
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLS 680

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS--- 471
             G+L  A S +  +  + D   W  ++ +C  +G F+  I+    M ++  AS      
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIR----MAERAVASDPQNDG 736

Query: 472 --VTLVNVISACGNLELAFEGKSL 493
             + L N+ SA G  E A   + +
Sbjct: 737 YYIMLANMYSAAGKWEEAERAREM 760



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L  S +L+  Y+   + E S  LF     KD V WN MI+    +  V   +  F +M 
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVV----HCLSIKAGMIADSSLCNVFVNMYAKC 121
           E  ++    T L ++SA T    ++QG+ +    H   +K  +   S L    V++ ++ 
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCL----VDLLSRS 682

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCL 150
           G+L  +E T   M    D V W T++S C+
Sbjct: 683 GNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 208/687 (30%), Positives = 358/687 (52%), Gaps = 53/687 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  ++   + +N   + +L + +M   G + DN +  + + A A L ++  GK IHA   
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 202 KLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           K GY  DS  V+V N+L+++Y +CGD  A  + F  ++ ++ VSWN++I       K+E 
Sbjct: 125 KFGYGVDS--VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLLMMN 317
           A +    M L  +VEP   T+V++++ C++  +   L  G+ VH Y +R+    +  ++N
Sbjct: 183 ALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  Y K   L+ +++L  +     DLV+WN+++S L             +EM+    +
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFS 424
               T+ ++LP+C+  E L  GK +H + LK G    N+   +AL+ MY NC  +++   
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   +  +     WN +I   +QN H +EA+  F  M +      +S T+  V+ AC   
Sbjct: 360 VFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                 +++HG  +K  +  D  VQN L+ MY R   I  A  +F    + +L TWN MI
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478

Query: 545 SAFSQNKAEVRALELFRHLE--------------FEPNEISIVSILSACTQLGVLRHGKQ 590
           + +  ++    AL L   ++               +PN I++++IL +C  L  L  GK+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH +        +  + SAL+DMY+ C               K+   W+ +I AYG HG 
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G EAI+L   M   G++P + + IS+ +ACSHSG+VDEGL+ +  M  +Y V P ++H+ 
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           C+VD+LGR+G+++EAY+ +  +P    K G W ++L A   H + ++G+  A+ L +LEP
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
               +Y+ L+N+Y + G W  A E+ +
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRR 745



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 166/602 (27%), Positives = 272/602 (45%), Gaps = 59/602 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +L+  Y     F +   +F     ++ V+WN++I++        M L  F  M++E 
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194

Query: 69  IRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           +   S TL+ +V+A   L     L  G+ VH   ++ G + +S + N  V MY K G L 
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLA 253

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           SS+         D V+WNT++S    N    + L Y REM   G + D  ++SS + A +
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L  L  GK +HA  +K G  D     V ++L+ MY  C  + +  R F GM  + +  W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA+I G++ N   +EA  L   M+    +  +  T+  ++  C  S       ++HG+ +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKE-----M 359
           +R L  D  + N+LMD YS+   +  A  +F  +    DLV+WN+MI+G +F E     +
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDAL 491

Query: 360 LYL-------------CSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           L L              S+ S      TL+ ILPSC +  +L  GK IH + +K   + +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +AL+ MY  CG L  +  +  +I    +   WN++I+A   +G+ QEAI   + M 
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLR-MM 609

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG---------------KSLHGLALKSLMGLDTR 507
             Q   P+ VT ++V +AC +  +  EG                S H   +  L+G   R
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFE 566
           ++ A   M    RD   A              W+ ++ A    N  E+  +     ++ E
Sbjct: 670 IKEAYQLMNMMPRDFNKAG------------AWSSLLGASRIHNNLEIGEIAAQNLIQLE 717

Query: 567 PN 568
           PN
Sbjct: 718 PN 719



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/735 (23%), Positives = 338/735 (45%), Gaps = 71/735 (9%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           W  ++ + V +  +   +  + +M+  GI+ D+     ++ A+  +  ++ G+ +H    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 101 KAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           K G   DS ++ N  VN+Y KCGD  +    F  +   + VSWN+++S        E  L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNS 216
             FR M     +  + +L S V A + L     L  GK +HA G++ G  +S    + N+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINT 241

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L++MY + G + +++        +D+V+WN ++     N +  EA + L EM ++  VEP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEP 300

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           D  T+ +++  C+   +LR G+ +H YA++   L  +  + ++L+D Y     +     +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA-ILPSCNSPE 382
           F+ +     +  WN+MI+G            LF  M       + ST +A ++P+C    
Sbjct: 361 FDGMFD-RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +    ++IH + +K G   +    N LM MY   G +  A  +  ++  + D   WN +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 478

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNA----------SPDSVTLVNVISACGNLELAFEGKS 492
                + H ++A+     M   +             P+S+TL+ ++ +C  L    +GK 
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  A+K+ +  D  V +AL+ MY +C  ++ +  VF+     N+ TWN +I A+  +  
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              A++L R +  +   PNE++ +S+ +AC+  G++  G +I    F++           
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI----FYV----------- 643

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           +   Y    S+  ++ ++   G  G+  EA +L + M     +    S  SLL A     
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS--SLLGASRIHN 701

Query: 670 LVDEGLQYYNNMLEEYDVRPET-EHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGV 725
            ++ G     N+++   + P    H+V + ++   +G   +A E  +N+    ++ +PG 
Sbjct: 702 NLEIGEIAAQNLIQ---LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG- 757

Query: 726 WGAMLSACS--HHGD 738
                  CS   HGD
Sbjct: 758 -------CSWIEHGD 765


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 188/568 (33%), Positives = 304/568 (53%), Gaps = 35/568 (6%)

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +++  A +G F  +  L  +M +   VE D  T   +    +    +  G  +HG+ 
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 70

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++   G    + NSL+ FY K+  +  A  +F+ +    D++SWNS+I+G          
Sbjct: 71  LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE-RDVISWNSIINGYVSNGLAEKG 129

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             +F +ML    +   +T++++   C     +  G+++H   +K  FS      N L+ M
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CGDL +A ++ + +S  S  S +  +I    + G   EA+K F+ M +++  SPD  
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVS-YTSMIAGYAREGLAGEAVKLFEEM-EEEGISPDVY 247

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T+  V++ C    L  EGK +H    ++ +G D  V NAL+ MY +C  ++ A  VF   
Sbjct: 248 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 307

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHG 588
              ++ +WN +I  +S+N     AL LF  L     F P+E ++  +L AC  L     G
Sbjct: 308 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 367

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           ++IHG++   G+  +  ++++L+DMY+ C               K   +W+ MI+ YG H
Sbjct: 368 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 427

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G G EAI LF++M  +GI   + S +SLL ACSHSGLVDEG +++N M  E  + P  EH
Sbjct: 428 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 487

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + CIVDML R+G L +AY FI+N+PI P   +WGA+L  C  H D K+ ++VAE +F+LE
Sbjct: 488 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 547

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           PEN GYY+ ++N+Y    +W+    + K
Sbjct: 548 PENTGYYVLMANIYAEAEKWEQVKRLRK 575



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 247/474 (52%), Gaps = 19/474 (4%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCL 89
           F E   +  + WN ++    ++      +  F +M+  G+  DS T   +  + + +  +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
             G  +H   +K+G    +S+ N  V  Y K   ++S+   F  M   D +SWN+I++G 
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           + N   EK L  F +M  SG + D  ++ S  A  A    +S G+ +H++G+K  +  S 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF--SR 178

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
                N+L+ MYS+CGD+++A+  F  M+ + VVS+ ++I G+A  G   EA  L  EM+
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               + PD+ TV  +++ CA   LL EG+ VH +     LG+D+ + N+LMD Y+K  S+
Sbjct: 239 -EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLFK-----EML----YLCSQFSFS----TLLAILP 376
            +AEL+F+ +  + D++SWN++I G  K     E L     L  +  FS    T+  +LP
Sbjct: 298 QEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C S  + + G+ IH + ++ G+ ++    N+L+ MY  CG L+ A  L   I+ + D  
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLV 415

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            W ++I     +G  +EAI  F  M +Q     D ++ V+++ AC +  L  EG
Sbjct: 416 SWTVMIAGYGMHGFGKEAIALFNQM-RQAGIEADEISFVSLLYACSHSGLVDEG 468



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 219/460 (47%), Gaps = 22/460 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        SL+  Y      +S+  +F E   +DV++WN++I   V N     GL  F
Sbjct: 74  GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+  GI  D  T++ + +       +  GR VH + +KA    +   CN  ++MY+KC
Sbjct: 134 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL+S++  F  M     VS+ ++++G        + +  F EM   G   D  ++++ +
Sbjct: 194 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 253

Query: 182 AASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
              A    L  GK +H   IK   LG++    + V+N+L+ MY++CG ++ AE  F  M 
Sbjct: 254 NCCARYRLLDEGKRVHEW-IKENDLGFD----IFVSNALMDMYAKCGSMQEAELVFSEMR 308

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++SWN II G++ N    EA  L + +   +   PD  TV  ++  CA      +GR
Sbjct: 309 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 368

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +HGY +R     D  + NSL+D Y+K  +L  A +LF+ IA   DLVSW  MI+G    
Sbjct: 369 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMH 427

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
                   LF +M     +    + +++L +C+    ++ G +  +  + +         
Sbjct: 428 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 487

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
              ++ M    GDL+ A+  ++ +    D + W  ++  C
Sbjct: 488 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 527


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 184/594 (30%), Positives = 320/594 (53%), Gaps = 34/594 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            LIS++ +   I  A R F  +  K  V ++ ++ G+A N    +A      M+    V 
Sbjct: 81  KLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRC-DEVM 139

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ L  ++L LR GR +HG  I      +L  M ++++ Y+K   +  A  +
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKM 199

Query: 336 FNAIAPMNDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPES 383
           F  + P  DLVSWN++++G  +            +M     +    TL+++LP+    ++
Sbjct: 200 FERM-PQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G+SIH +  + GF        A++  Y  CG + +A  + + +S  +  S WN +I 
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVS-WNTMID 317

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG  +EA  TF  M  +    P +V+++  + AC NL     G+ +H L  +  +G
Sbjct: 318 GYAQNGESEEAFATFLKMLDE-GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIG 376

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            D  V N+LI+MY +C+ +  A++VF +  +  + TWN MI  ++QN     AL LF  +
Sbjct: 377 FDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEM 436

Query: 564 E---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           +    +P+  ++VS+++A   L V R  K IHG        +N F+ +AL+D ++ C   
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAI 496

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG +G G EA++LF+EM N  ++P + + +S+++AC
Sbjct: 497 QTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGLV+EG+ Y+ +M E Y + P  +H+  +VD+LGR+G+L +A++FI+++P++P   V
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITV 616

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            GAML AC  H + ++G++ A+ LF L+P++ GY++ L+NMY +   W     +
Sbjct: 617 LGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARV 670



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 213/400 (53%), Gaps = 20/400 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++L   T+++  Y+     E +  +F     +D+V+WN ++    +N      +   
Sbjct: 172 GFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVV 231

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E G + DS TL+ ++ A+  +  L+ GR +H  + +AG     ++    ++ Y KC
Sbjct: 232 LQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKC 291

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + S+   F GM   + VSWNT++ G   N   E+    F +M   G +  NVS+  A+
Sbjct: 292 GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGAL 351

Query: 182 AASACLGELSYGKVIHAL--GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A A LG+L  G+ +H L    K+G++    VSV NSLISMYS+C  ++ A   F  +  
Sbjct: 352 HACANLGDLERGRYVHRLLDEKKIGFD----VSVMNSLISMYSKCKRVDIAASVFGNLKH 407

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K VV+WNA+I G+A NG   EA +L  EMQ    ++PD  T+V++I+  AD  + R+ + 
Sbjct: 408 KTVVTWNAMILGYAQNGCVNEALNLFCEMQ-SHDIKPDSFTLVSVITALADLSVTRQAKW 466

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG AIR L+  ++ +  +L+D ++K  ++  A  LF+ +   + +++WN+MI G     
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH-VITWNAMIDGYGTNG 525

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
                  LF EM     + +  T L+++ +C+    +E G
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG 565



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 29/542 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       T L++ +   +    +  +F    +K  V ++ M+    +N  +   + F+
Sbjct: 71  GFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFY 130

Query: 62  GEMVEEGIR---FDSTTLLIIVSALTQMNC-LKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             M  + +    +D T LL     L+  N  L++GR +H + I  G  ++       VN+
Sbjct: 131 ERMRCDEVMPVVYDFTYLL----QLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNL 186

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKC  +  +   F  M   D VSWNT+++G   N +  + +    +M  +G++ D+++L
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITL 246

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S + A A L  L  G+ IH    + G+E    V+V  +++  Y +CG + +A   F GM
Sbjct: 247 VSVLPAVADLKALRIGRSIHGYAFRAGFE--YMVNVATAMLDTYFKCGSVRSARLVFKGM 304

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + ++VVSWN +IDG+A NG+ EEAF    +M L   VEP   +++  +  CA+   L  G
Sbjct: 305 SSRNVVSWNTMIDGYAQNGESEEAFATFLKM-LDEGVEPTNVSMMGALHACANLGDLERG 363

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           R VH     + +G+D+ +MNSL+  YSK   +  A  +F  +     +V+WN+MI G   
Sbjct: 364 RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK-HKTVVTWNAMILGYAQ 422

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF EM     +    TL++++ +          K IH   ++     N   
Sbjct: 423 NGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFV 482

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+  +  CG +  A  L   +        WN +I     NGH +EA+  F  M Q  
Sbjct: 483 CTALIDTHAKCGAIQTARKLFD-LMQERHVITWNAMIDGYGTNGHGREALDLFNEM-QNG 540

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
           +  P+ +T ++VI+AC +  L  EG   +  ++K   GL+  + +  A++ + GR   + 
Sbjct: 541 SVKPNEITFLSVIAACSHSGLVEEGM-YYFESMKENYGLEPTMDHYGAMVDLLGRAGRLD 599

Query: 524 SA 525
            A
Sbjct: 600 DA 601


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 207/658 (31%), Positives = 337/658 (51%), Gaps = 41/658 (6%)

Query: 155 PEKCLLYFREMGWSGEQADNVSL-SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           P   L Y  + G   +  D V L  S V A     +L+ GK +H   ++ G +  P V +
Sbjct: 28  PADVLQYLHQKGSQVDSYDYVKLLQSCVKAK----DLAVGKQVHEHILRFGMK--PNVYI 81

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+L+ +Y  CG +  A R F   + K VVSWN +I G+A  G  +EAF+L   MQ    
Sbjct: 82  INTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQ-QEG 140

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +EPD  T V+++S C+    L  GR VH   +   L  +  + N+L+  Y+K  S+  A 
Sbjct: 141 LEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDAR 200

Query: 334 LLFNAIAPMNDLVSWNSMI-----SGLFKE-------MLYLCSQFSFSTLLAILPSCNSP 381
            +F+A+A   D VSW ++      SG  +E       ML    + S  T + +L +C S 
Sbjct: 201 RVFDAMAS-RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSL 259

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +LE GK IH   ++    ++     AL  MYI CG +  A  + + +  N D   WN +
Sbjct: 260 AALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTM 318

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I     +G  +EA   F  M ++   +PD VT + ++SAC        GK +H  A+K  
Sbjct: 319 IGGLVDSGQLEEAHGMFHRMLKE-CVAPDRVTYLAILSACARPGGLACGKEIHARAVKDG 377

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D R  NALI MY +   +K A  VF+     ++ +W  ++  ++     V +   F+
Sbjct: 378 LVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFK 437

Query: 562 HL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            +     E N+I+ + +L AC+    L+ GK+IH  V   G   +  +++AL+ MY  C 
Sbjct: 438 KMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCG 497

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         +    W+++I     +G+G EA++ F  M +  +RP  ++ ++++S
Sbjct: 498 SVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           AC    LV+EG + + +M ++Y + P  +H+ C+VD+L R+G L EA + I  +P +P  
Sbjct: 558 ACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSA 617

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +WGA+L+AC  HG+ ++G+Q AE   KLEP+N G Y+SLS +Y A G W+D  ++ K
Sbjct: 618 AMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRK 675



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 248/492 (50%), Gaps = 18/492 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y +      +  LF +  NK VV+WN MI+            + F  M +EG+  
Sbjct: 84  TLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEP 143

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + I+SA +    L  GR VH   ++AG+  ++++ N  ++MYAKCG +  +   F
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D VSW T+      + Y ++ L  +  M   G +   ++  + ++A   L  L 
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IHA  ++   E    V V+ +L  MY +CG ++ A   F  +  +DV++WN +I G
Sbjct: 264 KGKQIHAQIVE--SEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGG 321

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G+ EEA  + H M L   V PD  T + ++S CA    L  G+ +H  A++  L  
Sbjct: 322 LVDSGQLEEAHGMFHRM-LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVS 380

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+   N+L++ YSK+ S+  A  +F+ + P  D+VSW +++ G             FK+M
Sbjct: 381 DVRFGNALINMYSKAGSMKDARQVFDRM-PKRDVVSWTALVGGYADCGQVVESFSTFKKM 439

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    + +  T + +L +C++P +L++GK IH   +K G   +    NALM MY  CG +
Sbjct: 440 LQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSV 499

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  + + +S   D   WN +I    QNG   EA++ F+ M + +   P++ T VNV+S
Sbjct: 500 EDAIRVSEGMS-TRDVVTWNTLIGGLAQNGRGLEALQKFEVM-KSEEMRPNATTFVNVMS 557

Query: 480 ACGNLELAFEGK 491
           AC    L  EG+
Sbjct: 558 ACRVRNLVEEGR 569



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 167/626 (26%), Positives = 283/626 (45%), Gaps = 39/626 (6%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           ++G + DS   + ++ +  +   L  G+ VH   ++ GM  +  + N  + +Y  CG +N
Sbjct: 37  QKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVN 96

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F        VSWN ++SG  H    ++    F  M   G + D  +  S ++A +
Sbjct: 97  EARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACS 156

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L++G+ +H   ++ G  ++   +V N+LISMY++CG +  A R F  M  +D VSW
Sbjct: 157 SPAALNWGREVHVRVMEAGLANN--ATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             +   +A +G  +E+    H M L   V P   T + ++S C     L +G+ +H   +
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAM-LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIV 273

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
                 D+ +  +L   Y K  ++  A  +F  + P  D+++WN+MI GL          
Sbjct: 274 ESEHHSDVRVSTALTKMYIKCGAVKDAREVFECL-PNRDVIAWNTMIGGLVDSGQLEEAH 332

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F  ML  C      T LAIL +C  P  L  GK IH   +K G  ++    NAL++MY
Sbjct: 333 GMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMY 392

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G +  A  +  R+    D   W  ++      G   E+  TFK M  QQ    + +T
Sbjct: 393 SKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADCGQVVESFSTFKKML-QQGVEANKIT 450

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + V+ AC N      GK +H   +K+ +  D  V NAL++MY +C  ++ A  V E   
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
             ++ TWN +I   +QN   + AL+ F   +  E  PN  + V+++SAC    ++  G++
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
                         F S  +   Y    +   ++ M+      G   EA ++   M    
Sbjct: 571 -------------QFAS--MRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTM---P 612

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQ 676
            +P+ +   +LL+AC   G V+ G Q
Sbjct: 613 FKPSAAMWGALLAACRAHGNVEIGEQ 638



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 214/464 (46%), Gaps = 17/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   +     +L++ Y+       +  +F    ++D V+W  +  A  E+      L  +
Sbjct: 175 GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M++EG+R    T + ++SA   +  L++G+ +H   +++   +D  +      MY KC
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   D ++WNT++ G + +   E+    F  M       D V+  + +
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A  G L+ GK IHA  +K G      V   N+LI+MYS+ G ++ A + F  M  +D
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSD--VRFGNALINMYSKAGSMKDARQVFDRMPKRD 412

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW A++ G+A  G+  E+F    +M L + VE +  T + ++  C++ + L+ G+ +H
Sbjct: 413 VVSWTALVGGYADCGQVVESFSTFKKM-LQQGVEANKITYMCVLKACSNPVALKWGKEIH 471

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              ++  +  DL + N+LM  Y K  S+  A  +   ++   D+V+WN++I GL      
Sbjct: 472 AEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS-TRDVVTWNTLIGGLAQNGRG 530

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNA 408
                 F+ M     + + +T + ++ +C     +E G+       K  G          
Sbjct: 531 LEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC 590

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G L  A  ++  +      + W  ++ AC  +G+ +
Sbjct: 591 MVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVE 634


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 190/596 (31%), Positives = 323/596 (54%), Gaps = 38/596 (6%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S++ + G ++ A R F  +  K  V ++ ++ GFA     ++A      M+    VE
Sbjct: 74  KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY-DDVE 132

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ +C D   LR G+ +HG  ++     DL  M  L + Y+K   +++A  +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ + P  DLVSWN++++G            + K M     + SF T++++LP+ ++   
Sbjct: 193 FDRM-PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           +  GK IH + ++ GF +      AL+ MY  CG L  A  L   +   +  S WN +I 
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS-WNSMID 310

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A  QN + +EA+  F+ M  +    P  V+++  + AC +L     G+ +H L+++  +G
Sbjct: 311 AYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLGDLERGRFIHKLSVE--LG 367

Query: 504 LDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
           LD  V   N+LI+MY +C+++ +A+++F    +  L +WN MI  F+QN   + AL  F 
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
             R    +P+  + VS+++A  +L +  H K IHG V      +N F+++AL+DMY+ C 
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         +    W++MI  YG HG G  A+ELF EM    I+P   + +S++S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSHSGLV+ GL+ +  M E Y +    +H+  +VD+LGR+G+L EA++FI  +P++P  
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            V+GAML AC  H +    ++ AE LF+L P++ GY++ L+N+Y A   W+   ++
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 215/398 (54%), Gaps = 16/398 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   T L   Y+       +  +F     +D+V+WN ++    +N    M L   
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EE ++    T++ ++ A++ +  +  G+ +H  ++++G  +  ++    V+MYAKC
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F GM   + VSWN+++   + N  P++ +L F++M   G +  +VS+  A+
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG+L  G+ IH L ++LG + +  VSV NSLISMY +C +++ A   F  +  + 
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRN--VSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA+I GFA NG+  +A +   +M+  R+V+PD  T V++I+  A+  +    + +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITAIAELSITHHAKWIH 461

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  +R  L  ++ +  +L+D Y+K  ++  A L+F+ ++  + + +WN+MI G       
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHGFG 520

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
                LF+EM     + +  T L+++ +C+    +E G
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 230/495 (46%), Gaps = 24/495 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE---E 67
           T L++ +      + +  +F    +K  V ++ M+    +   +   L FF  M     E
Sbjct: 73  TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            + ++ T LL +     +   L+ G+ +H L +K+G   D        NMYAKC  +N +
Sbjct: 133 PVVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D VSWNTI++G   N      L   + M     +   +++ S + A + L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             +S GK IH   ++ G++    V+++ +L+ MY++CG +E A + F GM  ++VVSWN+
Sbjct: 250 RLISVGKEIHGYAMRSGFDS--LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +ID +  N   +EA  +  +M L   V+P   +V+  +  CAD   L  GR +H  ++  
Sbjct: 308 MIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------ 355
            L  ++ ++NSL+  Y K   +  A  +F  +     LVSWN+MI G             
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-RTLVSWNAMILGFAQNGRPIDALNY 425

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F +M     +    T ++++ +          K IH   ++     N     AL+ MY  
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG ++ A  +   +S    T+ WN +I     +G  + A++ F+ M Q+    P+ VT +
Sbjct: 486 CGAIMIARLIFDMMSERHVTT-WNAMIDGYGTHGFGKAALELFEEM-QKGTIKPNGVTFL 543

Query: 476 NVISACGNLELAFEG 490
           +VISAC +  L   G
Sbjct: 544 SVISACSHSGLVEAG 558


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 221/731 (30%), Positives = 374/731 (51%), Gaps = 43/731 (5%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTF--SGMHCADTV 140
           T  + L Q + VH  S+  G +  S SLC   +  YA  G  ++S   F  S  +     
Sbjct: 45  TLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAF 104

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
            WNT++         +    Y   M  +G + D  +    +   +   E+  G+ +H + 
Sbjct: 105 LWNTLIRANSIAGVFDGFGTY-NTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVA 163

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            KLG++   +V   N+L++ Y  CG    A + F  M  +D VSWN +I   +L+G +EE
Sbjct: 164 FKLGFDGDVFVG--NTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEE 221

Query: 261 AFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNS 318
           A      M   +  ++PD+ TVV+++ +CA++      R VH YA++  LLG  + + N+
Sbjct: 222 ALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNA 281

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+D Y K  S   ++ +F+ I   N ++SWN++I+             +F+ M+    + 
Sbjct: 282 LVDVYGKCGSEKASKKVFDEIDERN-VISWNAIITSFSFRGKYMDALDVFRLMIDEGMRP 340

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +  T+ ++LP        + G  +H + LK+   ++    N+L+ MY   G    A ++ 
Sbjct: 341 NSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIF 400

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            ++   +  S WN +I    +N    EA++  + M Q +  +P++VT  NV+ AC  L  
Sbjct: 401 NKMGVRNIVS-WNAMIANFARNRLEYEAVELVRQM-QAKGETPNNVTFTNVLPACARLGF 458

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK +H   ++    LD  V NAL  MY +C  +  A  VF      +  ++N +I  
Sbjct: 459 LNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVR-DEVSYNILIIG 517

Query: 547 FSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +S+    + +L LF   R L   P+ +S + ++SAC  L  +R GK+IHG +    F  +
Sbjct: 518 YSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTH 577

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            F++++LLD+Y+ C               K  A+W++MI  YG  G+   AI LF  M  
Sbjct: 578 LFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKE 637

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G+     S +++LSACSH GL+++G +Y+  M+ + ++ P   H+ C+VD+LGR+G ++
Sbjct: 638 DGVEYDSVSFVAVLSACSHGGLIEKGRKYFK-MMCDLNIEPTHTHYACMVDLLGRAGLME 696

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EA + I+ L I P   +WGA+L AC  HG+ ++G   AE LF+L+P++ GYYI LSNMY 
Sbjct: 697 EAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYA 756

Query: 769 ALGRWKDAVEI 779
              RW +A ++
Sbjct: 757 EAERWDEANKV 767



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 202/749 (26%), Positives = 357/749 (47%), Gaps = 57/749 (7%)

Query: 2   GFLAH-LPTSTSLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMGL 58
           GFL   +    SL+  Y++  +  +SL LF  +   ++    WN +I A      V  G 
Sbjct: 64  GFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRAN-SIAGVFDGF 122

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             +  MV  G++ D  T   ++   +    +++GR VH ++ K G   D  + N  +  Y
Sbjct: 123 GTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFY 182

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVS 176
             CG    +   F  M   D VSWNT++  C  + + E+ L +FR M     G Q D V+
Sbjct: 183 GNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVT 242

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + S +   A   +    +++H   +K+G     +V V N+L+ +Y +CG  +A+++ F  
Sbjct: 243 VVSVLPVCAETEDKVMARIVHCYALKVGLLGG-HVKVGNALVDVYGKCGSEKASKKVFDE 301

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  ++V+SWNAII  F+  GK+ +A D+   M +   + P+  T+ +++ +  +  L + 
Sbjct: 302 IDERNVISWNAIITSFSFRGKYMDALDVFRLM-IDEGMRPNSVTISSMLPVLGELGLFKL 360

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           G  VHG++++  +  D+ + NSL+D Y+KS S   A  +FN +   N +VSWN+MI+   
Sbjct: 361 GMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRN-IVSWNAMIANFA 419

Query: 357 K-----EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           +     E + L  Q           T   +LP+C     L  GK IH   +++G S +  
Sbjct: 420 RNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLF 479

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNS--DTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
             NAL  MY  CG L    +L Q + + S  D   +NI+I+  ++     E+++ F  M 
Sbjct: 480 VSNALTDMYSKCGCL----NLAQNVFNISVRDEVSYNILIIGYSRTNDSLESLRLFSEM- 534

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           +     PD V+ + V+SAC NL    +GK +HGL ++ L      V N+L+ +Y RC  I
Sbjct: 535 RLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRI 594

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
             A+ VF    N ++ +WN MI  +        A+ LF  ++    E + +S V++LSAC
Sbjct: 595 DLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSAC 654

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
           +  G++  G++    +  L  +                 ++  ++ M+   G  G   EA
Sbjct: 655 SHGGLIEKGRKYFKMMCDLNIE----------------PTHTHYACMVDLLGRAGLMEEA 698

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIV 698
            +L   +    I P  +   +LL AC   G ++ GL    ++ E   ++P+   +++ + 
Sbjct: 699 ADLIRGL---SIIPDTNIWGALLGACRIHGNIELGLWAAEHLFE---LKPQHCGYYILLS 752

Query: 699 DMLGRSGKLQEA---YEFIKNLPIQPKPG 724
           +M   + +  EA    E +K+   +  PG
Sbjct: 753 NMYAEAERWDEANKVRELMKSRGAKKNPG 781


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 221/739 (29%), Positives = 366/739 (49%), Gaps = 36/739 (4%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +T L  +  A +  + ++Q R VH   I  GM    +L +  + +Y  CG ++     F 
Sbjct: 44  TTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFF 103

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           G+   + + WN ++ G     + +  LL++ +M  S    D  +    + A   L  +  
Sbjct: 104 GLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL 163

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
             V+H     LG+    +V   ++LI +Y+  G I  A R F  +  +D + WN ++ G+
Sbjct: 164 CMVVHNTARSLGFHVDLFVG--SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGY 221

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G F  A      M+   S+   + T   ++S+CA       G  VHG  I     +D
Sbjct: 222 VKSGDFNNAMGTFCGMRTSYSMVNSV-TYTCILSICATRGKFCLGTQVHGLVIGSGFEFD 280

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             + N+L+  YSK  +L  A  LFN + P  D V+WN +I+G            LF  M+
Sbjct: 281 PQVANTLVAMYSKCGNLFDARKLFNTM-PQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMI 339

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               +    T  + LPS     SL   K +H + ++     +    +AL+ +Y   GD+ 
Sbjct: 340 SAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVE 399

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + Q+ +   D +    +I     +G   +AI TF+ + Q+    P+S+T+ +V+ A
Sbjct: 400 MARKIFQQNTL-VDVAVCTAMISGYVLHGLNIDAINTFRWLIQE-GMVPNSLTMASVLPA 457

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C  L     GK LH   LK  +     V +A+  MY +C  +  A   F      +   W
Sbjct: 458 CAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICW 517

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL---GVLRHGKQIHGHVFH 597
           N MIS+FSQN     A++LFR +     +   VS+ SA +       L +GK++HG+V  
Sbjct: 518 NSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIR 577

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
             F  ++F++SAL+DMYS C               K+  +W+S+I+AYG HG   E ++L
Sbjct: 578 NAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDL 637

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           FHEM  +G+ P   + + ++SAC H+GLV EG+ Y++ M  EY +    EH+ C+VD+ G
Sbjct: 638 FHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYG 697

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L EA++ IK++P  P  GVWG +L AC  HG+ ++ K  +  L +L+P+N GYY+ 
Sbjct: 698 RAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVL 757

Query: 763 LSNMYVALGRWKDAVEIGK 781
           LSN++   G W   +++ +
Sbjct: 758 LSNVHADAGEWGSVLKVRR 776



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 189/717 (26%), Positives = 324/717 (45%), Gaps = 50/717 (6%)

Query: 29  LFY--ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM 86
           LF+  E CN   + WN MI            L F+ +M+   +  D  T   ++ A   +
Sbjct: 101 LFFGLELCN--ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGL 158

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           N +    VVH  +   G   D  + +  + +YA  G +  +   F  +   DT+ WN ++
Sbjct: 159 NNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVML 218

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            G + +      +  F  M  S    ++V+ +  ++  A  G+   G  +H L I  G+E
Sbjct: 219 HGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFE 278

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
             P   V N+L++MYS+CG++  A + F  M   D V+WN +I G+  NG  +EA  L +
Sbjct: 279 FDP--QVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFN 336

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            M +   V+PD  T  + +    +S  LR  + VH Y +R  + +D+ + ++L+D Y K 
Sbjct: 337 AM-ISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKG 395

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL--AILPSCNSPESL 384
             +  A  +F     + D+    +MISG     L + +  +F  L+   ++P+  +  S+
Sbjct: 396 GDVEMARKIFQQ-NTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASV 454

Query: 385 ----------EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
                     + GK +HC  LK    N     +A+  MY  CG L  A+   +R+S  +D
Sbjct: 455 LPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETD 513

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
           + CWN +I + +QNG  + A+  F+ M     A  DSV+L + +S+  NL   + GK +H
Sbjct: 514 SICWNSMISSFSQNGKPEMAVDLFRQMG-MSGAKFDSVSLSSALSSAANLPALYYGKEMH 572

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           G  +++    DT V +ALI MY +C  +  A  VF      N  +WN +I+A+  +    
Sbjct: 573 GYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCAR 632

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
             L+LF  +      P+ ++ + I+SAC   G++  G     H FH   +E      A +
Sbjct: 633 ECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGI----HYFHCMTREYGI--GARM 686

Query: 612 DMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
           + Y         + M+  YG  G+  EA +    M      P      +LL AC   G V
Sbjct: 687 EHY---------ACMVDLYGRAGRLHEAFDAIKSM---PFTPDAGVWGTLLGACRLHGNV 734

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQEAYEFIKNLPIQPKPG 724
           +       ++LE   + P+   +  ++  +    G  G + +    +K   +Q  PG
Sbjct: 735 ELAKLASRHLLE---LDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPG 788



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 274/592 (46%), Gaps = 23/592 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   ++L+  Y++  Y   +  +F E   +D + WN M+   V++      +  F
Sbjct: 175 GFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTF 234

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M       +S T   I+S          G  VH L I +G   D  + N  V MY+KC
Sbjct: 235 CGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKC 294

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +   F+ M   DTV+WN +++G + N + ++    F  M  +G + D+V+ +S +
Sbjct: 295 GNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFL 354

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +    G L + K +H+  ++      P+ V + ++LI +Y + GD+E A + F   T  
Sbjct: 355 PSILESGSLRHCKEVHSYIVR---HRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLV 411

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV    A+I G+ L+G   +A +    + +   + P+  T+ +++  CA    L+ G+ +
Sbjct: 412 DVAVCTAMISGYVLHGLNIDAINTFRWL-IQEGMVPNSLTMASVLPACAALAALKLGKEL 470

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   +++ L   + + +++ D Y+K   L  A   F  ++   D + WNSMIS       
Sbjct: 471 HCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSE-TDSICWNSMISSFSQNGK 529

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF++M    ++F   +L + L S  +  +L +GK +H + ++  FS++T   +A
Sbjct: 530 PEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASA 589

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  A  +   ++  ++ S WN +I A   +G  +E +  F  M  +    
Sbjct: 590 LIDMYSKCGKLALARCVFNLMAGKNEVS-WNSIIAAYGNHGCARECLDLFHEML-RAGVH 647

Query: 469 PDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           PD VT + +ISACG+  L  EG    H +  +  +G        ++ +YGR   +  A  
Sbjct: 648 PDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFD 707

Query: 528 VFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
             +S  +  +   W  ++ A       E+  L     LE +P       +LS
Sbjct: 708 AIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 759


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 212/726 (29%), Positives = 370/726 (50%), Gaps = 46/726 (6%)

Query: 90  KQGRVVHCLSI-----KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           + GR    L++     K G + D   C   ++  A  G L  +      +    TV+WN 
Sbjct: 235 RVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNA 294

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +++    +    +    +++M   G      + +S ++A+A +     G+ IHA  +K G
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            + + +V   +SLI++Y + G I  A++ F   T K++V WNAI+ GF  N   EE   +
Sbjct: 355 LDANVFVG--SSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQM 412

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
              M+    +E D  T V+++  C +   L  GR VH   I+  +  DL + N+++D YS
Sbjct: 413 FQYMR-RADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYS 471

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLL 372
           K  ++  A+ LF+ I P+ D VSWN++I GL             K M +        +  
Sbjct: 472 KLGAIDVAKALFSLI-PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFA 530

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
             + +C++  ++E GK IH   +K    SN+ +G ++L+ +Y   GD+ ++  +L  +  
Sbjct: 531 TAINACSNIWAIETGKQIHSASIKYNVCSNHAVG-SSLIDLYSKFGDVESSRKVLAHVDA 589

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           +S     N +I    QN    EAI+ F+ + +     P + T  +++S C     +  GK
Sbjct: 590 SSIVPI-NALITGLVQNNREDEAIELFQQVLKD-GFKPSNFTFTSILSGCTRPVSSVIGK 647

Query: 492 SLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISAFSQ 549
            +H   LKS ++  DT +  +L+ +Y +C+ ++ A+ + E   +  NL  W   IS ++Q
Sbjct: 648 QVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQ 707

Query: 550 NKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N   V++L +F   R  +   +E +  S+L AC+++  L  GK+IHG +   GF      
Sbjct: 708 NGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETA 767

Query: 607 SSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +SAL+DMYS C                ++   W+SMI  +  +G   EA+ LF +M  S 
Sbjct: 768 TSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQ 827

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           I+P   +++ +L ACSH+GL+ EGL ++++M + Y + P  +H+ C++D+LGR G LQ+A
Sbjct: 828 IKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKA 887

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
            E I  LP +    +W   L+AC  H D + GK  A+ L ++EP++   Y+ LS+++ A 
Sbjct: 888 QEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAA 947

Query: 771 GRWKDA 776
           G W +A
Sbjct: 948 GNWVEA 953



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 286/595 (48%), Gaps = 24/595 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A++   +SL+  Y        +  +F  +  K++V WNA++   V+N      +  F
Sbjct: 354 GLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMF 413

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    +  D  T + ++ A   +  L  GR VHC++IK GM AD  + N  ++MY+K 
Sbjct: 414 QYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKL 473

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ ++  FS +   D+VSWN ++ G  HN    + +   + M + G   D VS ++A+
Sbjct: 474 GAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAI 533

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + +  +  GK IH+  IK  Y      +V +SLI +YS+ GD+E++ +    +    
Sbjct: 534 NACSNIWAIETGKQIHSASIK--YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASS 591

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V  NA+I G   N + +EA +L  ++ L    +P   T  +++S C   +    G+ VH
Sbjct: 592 IVPINALITGLVQNNREDEAIELFQQV-LKDGFKPSNFTFTSILSGCTRPVSSVIGKQVH 650

Query: 302 GYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
            Y ++  +L  D  +  SL+  Y K   L  A  L   +    +LV W + ISG      
Sbjct: 651 CYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGY 710

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F  M     +   +T  ++L +C+   +L  GK IH   +K GF +     +A
Sbjct: 711 SVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSA 770

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           LM MY  CGD++++F + + + +  +   WN +IV   +NG+  EA+  F+ M Q+    
Sbjct: 771 LMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKM-QESQIK 829

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           PD VTL+ V+ AC +  L  EG  LH   ++  + G+  RV +   LI + GR   ++ A
Sbjct: 830 PDDVTLLGVLIACSHAGLISEG--LHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKA 887

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILSA 578
             V +   +  +   W   ++A   +K E R     + L E EP   S    LS+
Sbjct: 888 QEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSS 942



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/601 (26%), Positives = 299/601 (49%), Gaps = 30/601 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  ++++  +++     +  L         V WNA+I +  ++         + +M ++G
Sbjct: 260 TCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQG 319

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +    +T   I+SA   M    +GR +H  ++K G+ A+  + +  +N+Y K G ++ ++
Sbjct: 320 LMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAK 379

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      + V WN I+ G + N   E+ +  F+ M  +  +AD+ +  S + A   L 
Sbjct: 380 KVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLY 439

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  G+ +H + IK G +   +V+  N+++ MYS+ G I+ A+  F  +  KD VSWNA+
Sbjct: 440 SLDLGRQVHCITIKNGMDADLFVA--NAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNAL 497

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G A N +  EA ++L  M+    +  D  +  T I+ C++   +  G+ +H  +I+  
Sbjct: 498 IVGLAHNEEEGEAINMLKRMKFY-GIALDEVSFATAINACSNIWAIETGKQIHSASIKYN 556

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +  +  + +SL+D YSK   +  +  +  A    + +V  N++I+G            LF
Sbjct: 557 VCSNHAVGSSLIDLYSKFGDVESSRKVL-AHVDASSIVPINALITGLVQNNREDEAIELF 615

Query: 357 KEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN--TIGVNALMH 411
           +++L   +  S F+F++   IL  C  P S   GK +HC+ LK    N   ++G+ +L+ 
Sbjct: 616 QQVLKDGFKPSNFTFTS---ILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI-SLVG 671

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y+ C  L  A  LL+ +  + +   W   I    QNG+  +++  F  M +  +   D 
Sbjct: 672 IYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRM-RSYDVRSDE 730

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T  +V+ AC  +    +GK +HGL +KS         +AL+ MY +C D+ S+  +F+ 
Sbjct: 731 ATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKE 790

Query: 532 CYN-CNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
             N  N+  WN MI  F++N     AL LF+ +   + +P++++++ +L AC+  G++  
Sbjct: 791 LKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISE 850

Query: 588 G 588
           G
Sbjct: 851 G 851



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 169/699 (24%), Positives = 321/699 (45%), Gaps = 76/699 (10%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGDLNSSECT 130
           D   + +++SA +++  L+ GR VHC  +K+G  + S  C    V+MYAKCG+++ +   
Sbjct: 156 DQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS-SVFCQAGLVDMYAKCGEVDDARRM 214

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+ C DT+ W ++++G       ++ L  F  M   G   D V+  + ++  A +G L
Sbjct: 215 FDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRL 274

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              + +                     I M S                    V+WNA+I 
Sbjct: 275 GDARTLL------------------KRIRMTS-------------------TVAWNAVIA 297

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            ++ +G   E F L  +M+  + + P  +T  +++S  A+     EGR +H  A++  L 
Sbjct: 298 SYSQSGLDSEVFGLYKDMK-KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLD 356

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + +SL++ Y K   +S A+ +F+  +   ++V WN+++ G            +F+ 
Sbjct: 357 ANVFVGSSLINLYVKHGCISDAKKVFD-FSTEKNIVMWNAILYGFVQNELQEETIQMFQY 415

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T +++L +C +  SL+ G+ +HC  +K G   +    NA++ MY   G 
Sbjct: 416 MRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGA 475

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A +L   I    D+  WN +IV    N    EAI   K M +    + D V+    I
Sbjct: 476 IDVAKALFSLIP-VKDSVSWNALIVGLAHNEEEGEAINMLKRM-KFYGIALDEVSFATAI 533

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC N+     GK +H  ++K  +  +  V ++LI +Y +  D++S+  V       ++ 
Sbjct: 534 NACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIV 593

Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
             N +I+   QN  E  A+ELF+ +    F+P+  +  SILS CT+      GKQ+H + 
Sbjct: 594 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYT 653

Query: 596 FHLG-FQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWE 638
                  +++ +  +L+ +Y  C                K+   W++ IS Y  +G   +
Sbjct: 654 LKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQ 713

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           ++ +F  M +  +R  +++  S+L ACS    + +G + +  +++   V  ET     ++
Sbjct: 714 SLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATS-ALM 772

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           DM  + G +  ++E  K L  +     W +M+   + +G
Sbjct: 773 DMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNG 811



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 241/543 (44%), Gaps = 49/543 (9%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA--IIDGF 252
           V+HA  ++LG      +   ++L+ +Y + G +  A RA    T     S  A  ++   
Sbjct: 74  VLHARILRLGLPLRGRLG--DALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCH 131

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A +G   +  D    ++      PD   +  ++S C+    L  GR VH   ++      
Sbjct: 132 ARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL 372
           +     L+D Y+K   +  A  +F+ IA   D + W SMI+G  +   Y  +   FS + 
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIA-CPDTICWTSMIAGYHRVGRYQQALALFSRM- 249

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
                                  K+G   + +    ++    + G L  A +LL+RI   
Sbjct: 250 ----------------------EKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMT 287

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           S T  WN VI + +Q+G   E    +K M ++Q   P   T  +++SA  N+    EG+ 
Sbjct: 288 S-TVAWNAVIASYSQSGLDSEVFGLYKDM-KKQGLMPTRSTFASILSAAANMTAFDEGRQ 345

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  A+K  +  +  V ++LI +Y +   I  A  VF+     N+  WN ++  F QN+ 
Sbjct: 346 IHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNEL 405

Query: 553 EVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
           +   +++F   R  + E ++ + VS+L AC  L  L  G+Q+H      G   + F+++A
Sbjct: 406 QEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANA 465

Query: 610 LLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           +LDMYS                 K + +W+++I    ++ +  EAI +   M   GI   
Sbjct: 466 MLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALD 525

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
           + S  + ++ACS+   ++ G Q ++  + +Y+V         ++D+  + G ++ + + +
Sbjct: 526 EVSFATAINACSNIWAIETGKQIHSASI-KYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584

Query: 715 KNL 717
            ++
Sbjct: 585 AHV 587



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 30/312 (9%)

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC--NLCTWNCMISAFSQN 550
           LH   L+  + L  R+ +AL+ +YGR   +  A      C     +    + ++S  +++
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 551 KAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
            +    L+ F+ +       P++  I  +LSAC++LG L HG+Q+H  V   GF  + F 
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194

Query: 607 SSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L+DMY+                C     W+SMI+ Y   G+  +A+ LF  M   G 
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            P + + ++++S  +  G + +       +L+   +      +  I     +SG   E +
Sbjct: 255 VPDQVTCVTIISTLASMGRLGDA----RTLLKRIRMTSTVAWNAVIAS-YSQSGLDSEVF 309

Query: 712 EFIKNLPIQ---PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMY 767
              K++  Q   P    + ++LSA ++      G+Q+     K   + NV    SL N+Y
Sbjct: 310 GLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLY 369

Query: 768 VALGRWKDAVEI 779
           V  G   DA ++
Sbjct: 370 VKHGCISDAKKV 381


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 209/717 (29%), Positives = 362/717 (50%), Gaps = 41/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           V+C + K G+  ++ +C   V++ AK G L  +   F+    +  V WN  +SG + N  
Sbjct: 91  VYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGE 150

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-VSV 213
               +  FR+M W   + ++ + S A++A A   ELS G+ +H L ++    D  Y V V
Sbjct: 151 GGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLR---RDPEYDVFV 207

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             SL++MY++CGD+ AA R FW M  ++VVSW   I GF  + +   A  LL EM +   
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREM-VRNG 266

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  +  T  +++  CA   ++RE   +HG  ++  +  D ++  +L+  Y+    +  +E
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 334 LLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            +F     +++   W++ ISG           L + M +   + +     ++  S NS  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +EFG  +H   +K GF +  +  +AL  MY  C ++  ++ + + +      S W  ++
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS-WTAMV 442

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                +GH  EA  TF++M       PD V+L  ++SAC   E   +GK +HG  L+ + 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILD-GFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR-VY 500

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           G  T + +  I+MY +C+ +++A  +F++    +   W+ MIS ++ N     A+ LF+ 
Sbjct: 501 GETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQL 560

Query: 563 LEFEPNEISIV---SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---- 615
           +      I      SILS C  +    + K +HG+    G   +  +SS+L+ +YS    
Sbjct: 561 MVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGN 620

Query: 616 -----------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                      +     AW+++I  Y  HG    A+ +F  M   G+RP    ++S+LSA
Sbjct: 621 MDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CS +GLV++G  Y+N+M   Y V PE +H+ C+VD+LGRSG+L EA  F+ ++P++P   
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +++AC  H DT +G+ V E   +    + G + +LSN+    G W++   I K
Sbjct: 741 VWSTLVAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRK 796



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 272/597 (45%), Gaps = 33/597 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T ++   +       +L +F +      V WNA ++  V N    + +  F +MV     
Sbjct: 108 TGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCE 167

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T    +SA      L  GR VH L ++     D  +    VNMYAKCGD+ ++   
Sbjct: 168 PNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMRE 227

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSW T ++G + ++ P   +L  REM  +G   +  + +S + A A +  +
Sbjct: 228 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 287

Query: 191 SYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAI 248
                IH + +K   Y D     V  +LIS Y+  G IE +E+ F    T  +   W+A 
Sbjct: 288 REASQIHGMVLKTEMYLD---CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAF 344

Query: 249 IDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I G + N     +  LL  M  Q +R  +   A+V + ++       +  G  +H  AI+
Sbjct: 345 ISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVN------SIEFGGQLHSSAIK 397

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
               + +L+ ++L   YS+ +++  +  +F  +    D VSW +M++G            
Sbjct: 398 EGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQE-RDGVSWTAMVAGFATHGHSVEAFL 456

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F+ M+    +    +L AIL +CN  E L  GK +H   L++ +   T   +  + MY 
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYS 515

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C  +  A  +    +   D   W+ +I     NG  +EAI  F+ M    +   DS   
Sbjct: 516 KCQGVQTARRIFD-ATPCKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYIC 573

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            +++S C ++   F  K LHG A+K+ +  D  V ++L+ +Y R  ++  +  VF+    
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHG 588
            +L  W  +I  ++Q+ +   AL +F     L   P+ + +VS+LSAC++ G++  G
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 187/358 (52%), Gaps = 15/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   ++L T YS     + S  +F E   +D V+W AM+     +   V     F
Sbjct: 399 GFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTF 458

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN-VFVNMYAK 120
             M+ +G + D  +L  I+SA  +  CL +G+ VH  +++  +  +++  N  F++MY+K
Sbjct: 459 RNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR--VYGETTFINDCFISMYSK 516

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  + ++   F    C D V W++++SG   N   E+ +  F+ M  +  + D+   SS 
Sbjct: 517 CQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSI 576

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +    Y K +H   IK G       SV++SL+ +YS+ G+++ + + F  ++  
Sbjct: 577 LSLCADIARPFYCKPLHGYAIKAGILSDQ--SVSSSLVKVYSRSGNMDDSRKVFDEISVP 634

Query: 241 DVVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D+V+W  IIDG+A +G  + A   FDL+ ++     V PD   +V+++S C+ + L+ +G
Sbjct: 635 DLVAWTTIIDGYAQHGSSQNALAMFDLMVQL----GVRPDTVVLVSVLSACSRNGLVEQG 690

Query: 298 RSVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +    ++R   G +  + +   ++D   +S  L++A+   +++    DL+ W+++++
Sbjct: 691 FNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVA 747


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 198/601 (32%), Positives = 328/601 (54%), Gaps = 47/601 (7%)

Query: 216 SLISMYSQCGDIEAAERA---FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           +L  +  +  D  A   A   F+ +   D+  +N ++ GF+LN     +  L   ++   
Sbjct: 46  TLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNT 105

Query: 273 SVEPDIATVVTLISLCADS--LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
           ++ PD  T    ++ C++   L+L     +H ++I    G ++ + ++L+D Y K + + 
Sbjct: 106 NLSPDNFTYAFAVAACSNDKHLML-----LHAHSIIDGYGSNVFVGSALVDLYCKFSRVV 160

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ + P  D V WN+MI+GL            F+EM+    +   ST+ A+LP+ 
Sbjct: 161 YARKVFDGM-PERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAA 219

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              + L+ G  I C  LK+GF      +  L+ +Y  CGD+  A  L +RI+   D   +
Sbjct: 220 AELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN-RPDLIAY 278

Query: 439 NIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
           N +I   T NG  + ++K F+ +  + ++ +S   V L+ + S  G+L LA    S+HG 
Sbjct: 279 NAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC---SIHGF 335

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +KS + L+  V  A   +Y +  +I  A  +F+      +  WN MIS ++QN +   A
Sbjct: 336 CVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETA 395

Query: 557 LELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           + LF+ +   EF PN ++I +ILSAC QLG L  GK +H  +     + N ++S+AL+DM
Sbjct: 396 ISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDM 455

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               K+   W++MI  YG HG G EA++L++EM + G  P+  + 
Sbjct: 456 YAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTF 515

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +S+L ACSH+GLV EG + ++NM+ +Y + P  EH+ C+VD+LGRSG+L++A EFIK +P
Sbjct: 516 LSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMP 575

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++P P VWG +L AC  H DT + +  +E LF+L+P +VGYY+ LSN+Y     +  A  
Sbjct: 576 VEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAAS 635

Query: 779 I 779
           I
Sbjct: 636 I 636



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 157/592 (26%), Positives = 263/592 (44%), Gaps = 54/592 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L T T L     + S    + ALF+     D+  +N ++     N      +  +
Sbjct: 39  GYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLY 98

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +     +  D+ T    V+A +     K   ++H  SI  G  ++  + +  V++Y K
Sbjct: 99  THLRRNTNLSPDNFTYAFAVAACSND---KHLMLLHAHSIIDGYGSNVFVGSALVDLYCK 155

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              +  +   F GM   DTV WNT+++G + N   +  +  FREM   G + D+ ++++ 
Sbjct: 156 FSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAV 215

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A+A L EL  G  I  L +K+G+    Y  V   LIS+YS+CGD+  A   F  +   
Sbjct: 216 LPAAAELQELKVGMGIQCLALKIGFGFCDY--VLTGLISLYSKCGDVNTARLLFRRINRP 273

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++++NA+I GF  NG  E +  L  E+ L        +T+V LI L +    L    S+
Sbjct: 274 DLIAYNAMISGFTANGGTECSVKLFREL-LFSGERVSSSTIVGLIPLHSPFGHLHLACSI 332

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG+ ++  +  +  +  +    Y+K N +  A  LF+  +P   +V+WN+MISG      
Sbjct: 333 HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDE-SPEKTVVAWNAMISGYTQNGS 391

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LFKEM+      +  T+  IL +C    SL FGK +H          N     A
Sbjct: 392 TETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTA 451

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG++  A+ L   +S   +T  WN +I     +G+  EA+K +  M      +
Sbjct: 452 LVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEML-HLGYN 509

Query: 469 PDSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           P +VT ++V+ AC +  L  EG+ + H +  K       R++  LI  Y           
Sbjct: 510 PSAVTFLSVLYACSHAGLVGEGEEIFHNMVNK------YRIE-PLIEHYA---------- 552

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                         CM+    ++    +ALE  + +  EP      ++L AC
Sbjct: 553 --------------CMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGAC 590


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 209/717 (29%), Positives = 362/717 (50%), Gaps = 41/717 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           V+C + K G+  ++ +C   V++ AK G L  +   F+    +  V WN  +SG + N  
Sbjct: 91  VYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGE 150

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-VSV 213
               +  FR+M W   + ++ + S A++A A   ELS G+ +H L ++    D  Y V V
Sbjct: 151 GGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLR---RDPEYDVFV 207

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             SL++MY++CGD+ AA R FW M  ++VVSW   I GF  + +   A  LL EM +   
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREM-VRNG 266

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  +  T  +++  CA   ++RE   +HG  ++  +  D ++  +L+  Y+    +  +E
Sbjct: 267 VAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSE 326

Query: 334 LLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            +F     +++   W++ ISG           L + M +   + +     ++  S NS  
Sbjct: 327 KVFEEAGTVSNRSIWSAFISGVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS-- 384

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +EFG  +H   +K GF +  +  +AL  MY  C ++  ++ + + +      S W  ++
Sbjct: 385 -IEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVS-WTAMV 442

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                +GH  EA  TF++M       PD V+L  ++SAC   E   +GK +HG  L+ + 
Sbjct: 443 AGFATHGHSVEAFLTFRNMILD-GFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR-VY 500

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           G  T + +  I+MY +C+ +++A  +F++    +   W+ MIS ++ N     A+ LF+ 
Sbjct: 501 GETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQL 560

Query: 563 LEFEPNEISIV---SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---- 615
           +      I      SILS C  +    + K +HG+    G   +  +SS+L+ +YS    
Sbjct: 561 MVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGN 620

Query: 616 -----------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                      +     AW+++I  Y  HG    A+ +F  M   G+RP    ++S+LSA
Sbjct: 621 MDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSA 680

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CS +GLV++G  Y+N+M   Y V PE +H+ C+VD+LGRSG+L EA  F+ ++P++P   
Sbjct: 681 CSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM 740

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +++AC  H DT +G+ V E   +    + G + +LSN+    G W++   I K
Sbjct: 741 VWSTLVAACRVHDDTVLGRFV-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRK 796



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 272/597 (45%), Gaps = 33/597 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T ++   +       +L +F +      V WNA ++  V N    + +  F +MV     
Sbjct: 108 TGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCE 167

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T    +SA      L  GR VH L ++     D  +    VNMYAKCGD+ ++   
Sbjct: 168 PNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMRE 227

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSW T ++G + ++ P   +L  REM  +G   +  + +S + A A +  +
Sbjct: 228 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 287

Query: 191 SYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAI 248
                IH + +K   Y D     V  +LIS Y+  G IE +E+ F    T  +   W+A 
Sbjct: 288 REASQIHGMVLKTEMYLD---CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAF 344

Query: 249 IDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I G + N     +  LL  M  Q +R  +   A+V + ++       +  G  +H  AI+
Sbjct: 345 ISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVN------SIEFGGQLHSSAIK 397

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
               + +L+ ++L   YS+ +++  +  +F  +    D VSW +M++G            
Sbjct: 398 EGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQE-RDGVSWTAMVAGFATHGHSVEAFL 456

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F+ M+    +    +L AIL +CN  E L  GK +H   L++ +   T   +  + MY 
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYS 515

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C  +  A  +    +   D   W+ +I     NG  +EAI  F+ M    +   DS   
Sbjct: 516 KCQGVQTARRIFD-ATPCKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYIC 573

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            +++S C ++   F  K LHG A+K+ +  D  V ++L+ +Y R  ++  +  VF+    
Sbjct: 574 SSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV 633

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHG 588
            +L  W  +I  ++Q+ +   AL +F     L   P+ + +VS+LSAC++ G++  G
Sbjct: 634 PDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 187/358 (52%), Gaps = 15/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   ++L T YS     + S  +F E   +D V+W AM+     +   V     F
Sbjct: 399 GFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTF 458

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN-VFVNMYAK 120
             M+ +G + D  +L  I+SA  +  CL +G+ VH  +++  +  +++  N  F++MY+K
Sbjct: 459 RNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR--VYGETTFINDCFISMYSK 516

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  + ++   F    C D V W++++SG   N   E+ +  F+ M  +  + D+   SS 
Sbjct: 517 CQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSI 576

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +    Y K +H   IK G       SV++SL+ +YS+ G+++ + + F  ++  
Sbjct: 577 LSLCADIARPFYCKPLHGYAIKAGILSDQ--SVSSSLVKVYSRSGNMDDSRKVFDEISVP 634

Query: 241 DVVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D+V+W  IIDG+A +G  + A   FDL+ ++     V PD   +V+++S C+ + L+ +G
Sbjct: 635 DLVAWTTIIDGYAQHGSSQNALAMFDLMVQL----GVRPDTVVLVSVLSACSRNGLVEQG 690

Query: 298 RSVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +    ++R   G +  + +   ++D   +S  L++A+   +++    DL+ W+++++
Sbjct: 691 FNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVA 747


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 200/693 (28%), Positives = 350/693 (50%), Gaps = 59/693 (8%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  ++   + GDL+++      M   + VSWNT+++    +    + L  +  M   G  
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
             + +L+S ++A   +  L  G+  H L +K+G +++ +V   N+L+ MY++CG +E A 
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVE--NALLGMYTKCGGVEDAV 195

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F GM   + VS+ A++ G    G  ++A  L   M     V  D   V +++  CA +
Sbjct: 196 RLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARM-CRSGVRVDPVAVSSVLGSCAQA 254

Query: 292 --------LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
                      R G+ +H   +R+  G D  + NSL+D Y+K   + +A  +F+++ P  
Sbjct: 255 CASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL-PNI 313

Query: 344 DLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSN 401
             VSWN +I+G                           ++  + K++    L  + G   
Sbjct: 314 STVSWNILITGF-------------------------GQAGSYAKALEVLNLMEESGSEP 348

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N +  + ++   I   D+++A ++  +IS  S T+ WN ++    Q    Q+ ++ F+ M
Sbjct: 349 NEVTYSNMLASCIKARDVLSARAMFDKISRPSVTT-WNTLLSGYCQEELHQDTVELFRRM 407

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q QN  PD  TL  ++S+C  L +   G  +H  +++ L+  D  V + L+ MY +C  
Sbjct: 408 -QHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQ 466

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           I  A  +F      ++  WN MIS  + +     A + F+ +      P E S  S++++
Sbjct: 467 IGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINS 526

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C +L  +  G+QIH  +   G+ +N ++ SAL+DMY+ C               K+  AW
Sbjct: 527 CARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAW 586

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           + MI  Y  +G G +A++LF  M  +  RP   + I++L+ CSHSGLVDE + ++N+M  
Sbjct: 587 NEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMES 646

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
            Y + P  EH+ C++D LGR+G+L E    I N+P +  P VW  +L+AC+ H + ++G+
Sbjct: 647 TYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGE 706

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
             A+ LF+L+P+N   Y+ LSN+Y +LGR  DA
Sbjct: 707 CAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDA 739



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/595 (25%), Positives = 272/595 (45%), Gaps = 64/595 (10%)

Query: 14  LTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDS 73
           L+A       +++ AL  E  +++VV+WN +I A   +      L  +  M+ EG+    
Sbjct: 81  LSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTH 140

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            TL  ++SA   +  L  GR  H L++K G+  +  + N  + MY KCG +  +   F G
Sbjct: 141 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDG 200

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA--ASACLGELS 191
           M   + VS+  +M G +     +  L  F  M  SG + D V++SS +   A AC  E  
Sbjct: 201 MASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFD 260

Query: 192 Y------GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
                  G+ IHAL ++ G+    +V   NSLI MY++C  ++ A + F  +     VSW
Sbjct: 261 VVRAFRLGQCIHALIVRKGFGSDQHVG--NSLIDMYTKCMQMDEAVKVFDSLPNISTVSW 318

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I GF   G + +A ++L+ M+   S EP+  T   +++ C                 
Sbjct: 319 NILITGFGQAGSYAKALEVLNLMEESGS-EPNEVTYSNMLASC----------------- 360

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
             +   D+L   ++ D  S+ +                 + +WN+++SG           
Sbjct: 361 --IKARDVLSARAMFDKISRPS-----------------VTTWNTLLSGYCQEELHQDTV 401

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF+ M +   Q   +TL  IL SC+    L+ G  +H   ++    N+    + L+ MY
Sbjct: 402 ELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMY 461

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +  R++   D  CWN +I     +   +EA   FK M +     P   +
Sbjct: 462 SKCGQIGIARIIFNRMTER-DVVCWNSMISGLAIHSLNEEAFDFFKQM-RGNGMMPTESS 519

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
             ++I++C  L    +G+ +H   +K     +  V +ALI MY +C ++  A   F+   
Sbjct: 520 YASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMV 579

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
             N+  WN MI  ++QN    +A++LF ++   E  P+ ++ +++L+ C+  G++
Sbjct: 580 TKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLV 634



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 187/391 (47%), Gaps = 17/391 (4%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S+ A+F +     V TWN +++   +       +  F  M  + ++ D TTL +I+S+ +
Sbjct: 368 SARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCS 427

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           ++  L  G  VH  S++  +  D  + +  V+MY+KCG +  +   F+ M   D V WN+
Sbjct: 428 RLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNS 487

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++SG   ++  E+   +F++M  +G      S +S + + A L  +  G+ IHA  +K G
Sbjct: 488 MISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDG 547

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           Y+ + YV   ++LI MY++CG+++ A   F  M  K++V+WN +I G+A NG  E+A DL
Sbjct: 548 YDQNVYVG--SALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDL 605

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-----YAIRRLLGYDLLMMNSL 319
             E  L     PD  T + +++ C+ S L+ E  +        Y I  L  +       L
Sbjct: 606 F-EYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEH----YTCL 660

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCN 379
           +D   ++  L + E L + +   +D + W  +++           + +   L  + P   
Sbjct: 661 IDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNP 720

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           SP  L     +      LG   +  GV ALM
Sbjct: 721 SPYVL-----LSNIYASLGRHGDASGVRALM 746



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           A +SL   +    NA ++   R  D+ +A  + +   + N+ +WN +I+A ++++    A
Sbjct: 65  AFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEA 124

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           LEL+  +  E   P   ++ S+LSAC  +  L  G++ HG    +G  EN F+ +ALL M
Sbjct: 125 LELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGM 184

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C                +  ++++M+      G   +A+ LF  MC SG+R    +V
Sbjct: 185 YTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAV 244

Query: 659 ISLLSACSHSGLVDEGLQYYNNM---LEEYDVRP--ETEHHV--CIVDMLGRSGKLQEAY 711
            S+L +C+ +   +  +     +   +    VR    ++ HV   ++DM  +  ++ EA 
Sbjct: 245 SSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAV 304

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISLSNMYVA 769
           +   +LP       W  +++     G      +V  L+ +   EP  V Y    SNM  +
Sbjct: 305 KVFDSLP-NISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTY----SNMLAS 359

Query: 770 LGRWKDAV 777
             + +D +
Sbjct: 360 CIKARDVL 367



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 4/260 (1%)

Query: 3   FLAH--LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           FL H  +  ++ L+  YS       +  +F     +DVV WN+MI+    +        F
Sbjct: 445 FLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDF 504

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   G+    ++   ++++  +++ + QGR +H   +K G   +  + +  ++MYAK
Sbjct: 505 FKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAK 564

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+++ +   F  M   + V+WN ++ G   N + EK +  F  M  + ++ D V+  + 
Sbjct: 565 CGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAV 624

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +  G L    +     ++  Y  +P       LI    + G +   E     M CK
Sbjct: 625 LTGCSHSG-LVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCK 683

Query: 241 -DVVSWNAIIDGFALNGKFE 259
            D + W  ++   A++   E
Sbjct: 684 DDPIVWEVLLAACAVHHNAE 703


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 324/598 (54%), Gaps = 33/598 (5%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           SV + L  +Y  C  +  A R F  +    V+ WN II  +A NG F+ A DL H M L 
Sbjct: 44  SVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM-LH 102

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V P+  T   ++  C+  L + +G  +H +A    L  D+ +  +L+DFY+K   L +
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162

Query: 332 AELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQF-------SFSTLLAILPSCN 379
           A+ LF++++   D+V+WN+MI+G     L  + + L  Q        + ST++ +LP+  
Sbjct: 163 AQRLFSSMS-HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
             ++L  GK++H + ++  F N  +    L+ MY  C  L+ A  +   +   ++ S W+
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS-WS 280

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I     +   +EA++ F  M  +    P  VTL +V+ AC  L     G+ LH   +K
Sbjct: 281 AMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               LD  + N L++MY +C  I  A   F+     +  +++ ++S   QN     AL +
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR ++    +P+  +++ +L AC+ L  L+HG   HG++   GF  ++ I +AL+DMYS 
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 460

Query: 617 CKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C   +               +W++MI  YG HG G EA+ LFH++   G++P   + I L
Sbjct: 461 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 520

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LS+CSHSGLV EG  +++ M  ++ + P  EH +C+VD+LGR+G + EA+ FI+N+P +P
Sbjct: 521 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +W A+LSAC  H + ++G++V++ +  L PE+ G ++ LSN+Y A GRW DA  I
Sbjct: 581 DVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHI 638



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 263/583 (45%), Gaps = 47/583 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF E  N  V+ WN +I A   N      +  +  M+  G+R +  T   ++ A + +  
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           ++ G  +H  +   G+ +D  +C   V+ YAKCG L  ++  FS M   D V+WN +++G
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG 184

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           C      +  +    +M   G   ++ ++   +        L +GK +H   ++  +++ 
Sbjct: 185 CSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNG 244

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V   L+ MY++C  +  A + F  M  ++ VSW+A+I G+  +   +EA +L  +M
Sbjct: 245 --VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM 302

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L  +++P   T+ +++  CA    L  GR +H Y I+     D+L+ N+L+  Y+K   
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV 362

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +  A   F+ + P  D VS+++++SG            +F+ M         +T+L +LP
Sbjct: 363 IDDAIRFFDXMNP-KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C+   +L+ G   H + +  GF+ +T+  NAL+ MY  CG +  A  +  R+  + D  
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH-DIV 480

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I+    +G   EA+  F  +       PD +T + ++S+C +  L  EG+     
Sbjct: 481 SWNAMIIGYGIHGLGMEALGLFHDLL-ALGLKPDDITFICLLSSCSHSGLVMEGR----- 534

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
                           +      RD  S     E C         CM+    +      A
Sbjct: 535 ----------------LWFDAMSRDF-SIVPRMEHCI--------CMVDILGRAGLIDEA 569

Query: 557 LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
               R++ FEP+     ++LSAC     +  G+++   +  LG
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 37/501 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+       +  LF    ++DVV WNAMI  C         +    +M EEGI 
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S+T++ ++  + +   L  G+ +H   ++        +    ++MYAKC  L  +   
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGE 189
           F  M   + VSW+ ++ G + ++  ++ L  F +M          V+L S + A A L +
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS G+ +H   IKLG      + + N+L+SMY++CG I+ A R F  M  KD VS++AI+
Sbjct: 328 LSRGRKLHCYIIKLGXVLD--ILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIV 385

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   NG    A  +   MQL   ++PD+ T++ ++  C+    L+ G   HGY I R  
Sbjct: 386 SGCVQNGNAAVALSIFRMMQL-SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF 444

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFK 357
             D L+ N+L+D YSK   +S A  +FN +   +D+VSWN+MI             GLF 
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRM-DRHDIVSWNAMIIGYGIHGLGMEALGLFH 503

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           ++L L  +    T + +L SC+    +  G+      L     +    +   M   I   
Sbjct: 504 DLLALGLKPDDITFICLLSSCSHSGLVMEGR------LWFDAMSRDFSIVPRMEHCICMV 557

Query: 418 DLVAAFSLLQRISH-------NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           D++    L+    H         D   W+ ++ AC  + + +   +  K +   Q+  P+
Sbjct: 558 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI---QSLGPE 614

Query: 471 S----VTLVNVISACGNLELA 487
           S    V L N+ SA G  + A
Sbjct: 615 STGNFVLLSNIYSAAGRWDDA 635



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +   T LL  Y+       +  +F     ++ V+W+AMI   V + C+   L  
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALEL 298

Query: 61  FGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+ ++ +     TL  ++ A  ++  L +GR +HC  IK G + D  L N  ++MYA
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA 358

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG ++ +   F  M+  D+VS++ I+SGC+ N      L  FR M  SG   D  ++  
Sbjct: 359 KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + L  L +G   H   I  G+       + N+LI MYS+CG I  A   F  M  
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTL--ICNALIDMYSKCGKISFAREVFNRMDR 476

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            D+VSWNA+I G+ ++G   EA  L H++ L   ++PD  T + L+S C+ S L+ EGR
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDL-LALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 126/269 (46%), Gaps = 2/269 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +    +LL+ Y+     + ++  F     KD V+++A+++ CV+N    + L  F
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI  D TT+L ++ A + +  L+ G   H   I  G   D+ +CN  ++MY+KC
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F+ M   D VSWN ++ G   +    + L  F ++   G + D+++    +
Sbjct: 462 GKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLL 521

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
           ++ +  G +  G++     +   +   P +     ++ +  + G I+ A      M  + 
Sbjct: 522 SSCSHSGLVMEGRLWFD-AMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           DV  W+A++    ++   E   ++  ++Q
Sbjct: 581 DVRIWSALLSACRIHKNIELGEEVSKKIQ 609



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 24/200 (12%)

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           +L AC Q   L   K+IH H        +S +   L  +Y +C                S
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              W+ +I AY ++G    AI+L+H M + G+RP K +   +L ACS    +++G++ ++
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 680 NMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +  + + +  E++  VC  +VD   + G L EA     ++        W AM++ CS +G
Sbjct: 134 HA-KMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVAWNAMIAGCSLYG 189

Query: 738 DTKMGKQVAELLFKLEPENV 757
              +     +L+ +++ E +
Sbjct: 190 ---LCDDAVQLIMQMQEEGI 206



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF        +L+  YS       +  +F      D+V+WNAMI     +   +  L  
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLCNVFVNMYA 119
           F +++  G++ D  T + ++S+ +    + +GR+    +S    ++     C   V++  
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 561

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           + G ++ +      M    D   W+ ++S C +H N
Sbjct: 562 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 218/742 (29%), Positives = 372/742 (50%), Gaps = 49/742 (6%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS--G 133
           L +++ A +  N L+QG+ VH   I   +  DS      + MYA CG  +     F    
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           +  +    WN+I+S  + N    + L ++ +M   G   D  +    V A   L      
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
             +      LG + + +V+  +SLI  Y + G I+   + F  +  KD V WN +++G+A
Sbjct: 158 DFLSDTVSSLGMDCNEFVA--SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G  +        M+ M  + P+  T   ++S+CA  LL+  G  +HG  +   + ++ 
Sbjct: 216 KCGALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML- 360
            + NSL+  YSK      A  LF  ++   D V+WN MISG             F EM+ 
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333

Query: 361 --YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
              L    +FS+LL   PS +  E+LE+ K IHC+ ++   S +    +AL+  Y  C  
Sbjct: 334 SGVLPDAITFSSLL---PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A ++  +  ++ D   +  +I     NG + ++++ F+ + + +  SP+ +TLV+++
Sbjct: 391 VSMAQNIFSQ-CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSIL 448

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCN 536
              G L     G+ LHG  +K   G D R  +  A+I MY +C  +  A  +FE     +
Sbjct: 449 PVIGILLALKLGRELHGFIIKK--GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
           + +WN MI+  +Q+     A+++FR +       + +SI + LSAC  L     GK IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +       + +  S L+DMY+ C               K+  +W+S+I+A G HGK  +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626

Query: 639 AIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           ++ LFHEM   SGIRP + + + ++S+C H G VDEG++++ +M E+Y ++P+ EH+ C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+ GR+G+L EAYE +K++P  P  GVWG +L AC  H + ++ +  +  L  L+P N 
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
           GYY+ +SN +     W+   ++
Sbjct: 747 GYYVLISNAHANAREWESVTKV 768



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 153/644 (23%), Positives = 293/644 (45%), Gaps = 65/644 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ++SL+ AY      +    LF     KD V WN M+    +   +   +  F  M  + 
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  ++ T   ++S       +  G  +H L + +G+  + S+ N  ++MY+KCG  + + 
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M  ADTV+WN ++SG + +   E+ L +F EM  SG   D ++ SS + + +   
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L Y K IH   ++  +  S  + +T++LI  Y +C  +  A+  F      DVV + A+
Sbjct: 355 NLEYCKQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG + ++ ++   +  ++ + P+  T+V+++ +    L L+ GR +HG+ I++ 
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
                 +  +++D Y+K   ++ A  +F  ++   D+VSWNSMI+             +F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPSAAIDIF 530

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           ++M      +   ++ A L +C +  S  FGK+IH + +K   +++    + L+ MY  C
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L AA ++ + +   +  S WN +I AC  +G  ++++  F  M ++    PD +T + 
Sbjct: 591 GNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +IS+C ++    EG                R   ++   YG    I+             
Sbjct: 650 IISSCCHVGDVDEG---------------VRFFRSMTEDYG----IQPQQE--------- 681

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
              + C++  F +      A E  + + F P+     ++L AC                 
Sbjct: 682 --HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR---------------L 724

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
           H   +     SS L+D+     SN+ +  +IS    + + WE++
Sbjct: 725 HKNVELAEVASSKLMDLD---PSNSGYYVLISNAHANAREWESV 765



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 1/194 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF        +++  Y+       +  +F     +D+V+WN+MIT C ++      +  
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   GI +D  ++   +SA   +     G+ +H   IK  + +D    +  ++MYAK
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
           CG+L ++   F  M   + VSWN+I++ C ++   +  L  F EM   SG + D ++   
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649

Query: 180 AVAASACLGELSYG 193
            +++   +G++  G
Sbjct: 650 IISSCCHVGDVDEG 663


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 324/598 (54%), Gaps = 33/598 (5%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           SV + L  +Y  C  +  A R F  +    V+ WN II  +A NG F+ A DL H M L 
Sbjct: 44  SVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSM-LH 102

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V P+  T   ++  C+  L + +G  +H +A    L  D+ +  +L+DFY+K   L +
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162

Query: 332 AELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQF-------SFSTLLAILPSCN 379
           A+ LF++++   D+V+WN+MI+G     L  + + L  Q        + ST++ +LP+  
Sbjct: 163 AQRLFSSMS-HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
             ++L  GK++H + ++  F N  +    L+ MY  C  L+ A  +   +   ++ S W+
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS-WS 280

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I     +   +EA++ F  M  +    P  VTL +V+ AC  L     G+ LH   +K
Sbjct: 281 AMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               LD  + N L++MY +C  I  A   F+     +  +++ ++S   QN     AL +
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSI 400

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR ++    +P+  +++ +L AC+ L  L+HG   HG++   GF  ++ I +AL+DMYS 
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 460

Query: 617 CKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C   +               +W++MI  YG HG G EA+ LFH++   G++P   + I L
Sbjct: 461 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 520

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LS+CSHSGLV EG  +++ M  ++ + P  EH +C+VD+LGR+G + EA+ FI+N+P +P
Sbjct: 521 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 580

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +W A+LSAC  H + ++G++V++ +  L PE+ G ++ LSN+Y A GRW DA  I
Sbjct: 581 DVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHI 638



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 263/583 (45%), Gaps = 47/583 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF E  N  V+ WN +I A   N      +  +  M+  G+R +  T   ++ A + +  
Sbjct: 65  LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           ++ G  +H  +   G+ +D  +C   V+ YAKCG L  ++  FS M   D V+WN +++G
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG 184

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           C      +  +    +M   G   ++ ++   +        L +GK +H   ++  +++ 
Sbjct: 185 CSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNG 244

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V   L+ MY++C  +  A + F  M  ++ VSW+A+I G+  +   +EA +L  +M
Sbjct: 245 --VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM 302

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L  +++P   T+ +++  CA    L  GR +H Y I+     D+L+ N+L+  Y+K   
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV 362

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +  A   F+ + P  D VS+++++SG            +F+ M         +T+L +LP
Sbjct: 363 IDDAIRFFDEMNP-KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C+   +L+ G   H + +  GF+ +T+  NAL+ MY  CG +  A  +  R+  + D  
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRH-DIV 480

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I+    +G   EA+  F  +       PD +T + ++S+C +  L  EG+     
Sbjct: 481 SWNAMIIGYGIHGLGMEALGLFHDLL-ALGLKPDDITFICLLSSCSHSGLVMEGR----- 534

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
                           +      RD  S     E C         CM+    +      A
Sbjct: 535 ----------------LWFDAMSRDF-SIVPRMEHCI--------CMVDILGRAGLIDEA 569

Query: 557 LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
               R++ FEP+     ++LSAC     +  G+++   +  LG
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 232/501 (46%), Gaps = 37/501 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+       +  LF    ++DVV WNAMI  C         +    +M EEGI 
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S+T++ ++  + +   L  G+ +H   ++        +    ++MYAKC  L  +   
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGE 189
           F  M   + VSW+ ++ G + ++  ++ L  F +M          V+L S + A A L +
Sbjct: 268 FDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS G+ +H   IKLG      + + N+L+SMY++CG I+ A R F  M  KD VS++AI+
Sbjct: 328 LSRGRKLHCYIIKLG--SVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIV 385

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   NG    A  +   MQL   ++PD+ T++ ++  C+    L+ G   HGY I R  
Sbjct: 386 SGCVQNGNAAVALSIFRMMQL-SGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF 444

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFK 357
             D L+ N+L+D YSK   +S A  +FN +   +D+VSWN+MI             GLF 
Sbjct: 445 ATDTLICNALIDMYSKCGKISFAREVFNRM-DRHDIVSWNAMIIGYGIHGLGMEALGLFH 503

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           ++L L  +    T + +L SC+    +  G+      L     +    +   M   I   
Sbjct: 504 DLLALGLKPDDITFICLLSSCSHSGLVMEGR------LWFDAMSRDFSIVPRMEHCICMV 557

Query: 418 DLVAAFSLLQRISH-------NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           D++    L+    H         D   W+ ++ AC  + + +   +  K +   Q+  P+
Sbjct: 558 DILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKI---QSLGPE 614

Query: 471 S----VTLVNVISACGNLELA 487
           S    V L N+ SA G  + A
Sbjct: 615 STGNFVLLSNIYSAAGRWDDA 635



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 153/299 (51%), Gaps = 4/299 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F   +   T LL  Y+       +  +F     ++ V+W+AMI   V + C+   L  
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALEL 298

Query: 61  FGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+ ++ +     TL  ++ A  ++  L +GR +HC  IK G + D  L N  ++MYA
Sbjct: 299 FDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA 358

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG ++ +   F  M+  D+VS++ I+SGC+ N      L  FR M  SG   D  ++  
Sbjct: 359 KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLG 418

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + L  L +G   H   I  G+       + N+LI MYS+CG I  A   F  M  
Sbjct: 419 VLPACSHLAALQHGFCSHGYLIVRGFATDTL--ICNALIDMYSKCGKISFAREVFNRMDR 476

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            D+VSWNA+I G+ ++G   EA  L H++ L   ++PD  T + L+S C+ S L+ EGR
Sbjct: 477 HDIVSWNAMIIGYGIHGLGMEALGLFHDL-LALGLKPDDITFICLLSSCSHSGLVMEGR 534



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)

Query: 563 LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
           L FE    + + +L AC Q   L   K+IH H        +S +   L  +Y +C     
Sbjct: 3   LRFEVKN-NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVL 61

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                      S   W+ +I AY ++G    AI+L+H M + G+RP K +   +L ACS 
Sbjct: 62  ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
              +++G++ +++  + + +  E++  VC  +VD   + G L EA     ++        
Sbjct: 122 LLAIEDGVEIHSHA-KMFGL--ESDVFVCTALVDFYAKCGILVEAQRLFSSMS-HRDVVA 177

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           W AM++ CS +G   +     +L+ +++ E +
Sbjct: 178 WNAMIAGCSLYG---LCDDAVQLIMQMQEEGI 206



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF        +L+  YS       +  +F      D+V+WNAMI     +   +  L  
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLCNVFVNMYA 119
           F +++  G++ D  T + ++S+ +    + +GR+    +S    ++     C   V++  
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 561

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           + G ++ +      M    D   W+ ++S C +H N
Sbjct: 562 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597


>gi|242073178|ref|XP_002446525.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
 gi|241937708|gb|EES10853.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
          Length = 910

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 247/798 (30%), Positives = 395/798 (49%), Gaps = 94/798 (11%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-----RVVHCLSIKAGMIADS-SLCNVF 114
            G M+ EG+R  +   L + +A+   + L  G     R +H L++K+G +A S ++    
Sbjct: 60  IGCMLAEGLRPGA---LELAAAIRSASALPGGGGALARCLHGLAVKSGRVASSATVAKAV 116

Query: 115 VNMYAK-CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG--EQ 171
           ++ Y +  G L  +   F  M   D V WN +++ C      E   + FR M   G  EQ
Sbjct: 117 MDAYGRRLGSLADALLVFDEMARPDAVCWNILITACSRRGLFEDAFVLFRSMLSCGVVEQ 176

Query: 172 ADNVSLSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           +   +++ AV   AC   G L  G+ +H   +K G E        N+L+SMY++CG   A
Sbjct: 177 SMPTAVTVAVIVPACAKWGHLRTGRSVHGYVVKTGLESDTLCG--NALVSMYAKCGGSRA 234

Query: 230 ---AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              A RAF  + CKDVVSWN++I G+  N  F+EA  L  +M    S+ P+ +TV +++ 
Sbjct: 235 MDDAHRAFSSIRCKDVVSWNSVIAGYIENRLFQEALALFGQMTSQGSL-PNYSTVASILP 293

Query: 287 LCADSLLLR-EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           +C+ +   R  G+ VH + +R  L  D+ + N+LM  YSK   +   E +F ++  + D+
Sbjct: 294 VCSFTEFGRYHGKEVHSFVVRHGLEMDVSVSNALMTHYSKVLEVKAVESIFMSM-DVRDI 352

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
           VSWN++I+G            LF E+L         + +++L +C     ++ G  +H +
Sbjct: 353 VSWNTIIAGYVMNGYHYRALGLFHELLSTGIAPDSVSFISLLTACAQVGDVKAGMGVHGY 412

Query: 394 QLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            L+       T  +NAL+  Y +C     AF     I  N D+  WN ++ AC  +    
Sbjct: 413 ILQRPVLLQETSLMNALVTFYSHCDRFDDAFRAFTDIL-NKDSISWNAILSACAHSEQHI 471

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
           E      S   +     DSVT++NVI   + CG +++  E    HG +L+     +T V 
Sbjct: 472 EKFFVLMSEMCRGVNQWDSVTVLNVIHVSTFCG-IKMVREA---HGWSLRVGYTGETSVA 527

Query: 510 NALITMYGRCRDIKSASTVFE--------------SCY---NC--------------NLC 538
           NA++  Y +C     A+ +F               SCY   NC              +L 
Sbjct: 528 NAILDAYVKCGYSHDANILFRNHGGRNTVTDNIMISCYLKNNCIEDAEVIFNHMAEKDLT 587

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN MI  ++QN  + +A  LF HL+ E   P+ +SI +IL AC  L  ++  +Q H ++
Sbjct: 588 SWNLMIQLYAQNHMDDQAFSLFNHLQSEGLKPDLVSITNILEACIHLCSVQLVRQCHAYM 647

Query: 596 FHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAIE 641
                 E+  +  AL+D YS C              K    +++MI  Y  HG   +A+E
Sbjct: 648 LRASL-EDIHLEGALVDAYSKCGNITNAYNIFEVSSKDLVTFTAMIGCYAMHGMAEKAVE 706

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF +M    IRP    + +LLSACSH+GLVD G++ + ++ E + V P  EH+ C+VD+L
Sbjct: 707 LFSKMIKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIGEIHRVVPTAEHYACMVDLL 766

Query: 702 GRSGKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
            RSG LQ+AY F  ++P        W ++L AC  HG+ K+G+  A+ LF +E  ++G Y
Sbjct: 767 ARSGHLQDAYMFALDMPPHAVNANAWSSLLGACKVHGEIKIGQLAADQLFSMEEGDIGNY 826

Query: 761 ISLSNMYVALGRWKDAVE 778
           + +SN+Y A  +W D VE
Sbjct: 827 VIMSNIYAADEKW-DGVE 843



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/704 (26%), Positives = 329/704 (46%), Gaps = 88/704 (12%)

Query: 9   TSTSLLTAYSN-VSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
            + +++ AY   +     +L +F E    D V WN +ITAC            F  M+  
Sbjct: 112 VAKAVMDAYGRRLGSLADALLVFDEMARPDAVCWNILITACSRRGLFEDAFVLFRSMLSC 171

Query: 68  GIRFDS----TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           G+   S     T+ +IV A  +   L+ GR VH   +K G+ +D+   N  V+MYAKCG 
Sbjct: 172 GVVEQSMPTAVTVAVIVPACAKWGHLRTGRSVHGYVVKTGLESDTLCGNALVSMYAKCGG 231

Query: 124 ---LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   FS + C D VSWN++++G + N   ++ L  F +M   G    N S  ++
Sbjct: 232 SRAMDDAHRAFSSIRCKDVVSWNSVIAGYIENRLFQEALALFGQMTSQGSLP-NYSTVAS 290

Query: 181 VAASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +       E    +GK +H+  ++ G E    VSV+N+L++ YS+  +++A E  F  M 
Sbjct: 291 ILPVCSFTEFGRYHGKEVHSFVVRHGLEMD--VSVSNALMTHYSKVLEVKAVESIFMSMD 348

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D+VSWN II G+ +NG    A  L HE+ L   + PD  + ++L++ CA    ++ G 
Sbjct: 349 VRDIVSWNTIIAGYVMNGYHYRALGLFHEL-LSTGIAPDSVSFISLLTACAQVGDVKAGM 407

Query: 299 SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
            VHGY ++R +L  +  +MN+L+ FYS  +    A   F  I    D +SWN+++S    
Sbjct: 408 GVHGYILQRPVLLQETSLMNALVTFYSHCDRFDDAFRAFTDILN-KDSISWNAILSACAH 466

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     L  EM    +Q+   T+L ++   ++   ++  +  H W L++G++  T 
Sbjct: 467 SEQHIEKFFVLMSEMCRGVNQWDSVTVLNVI-HVSTFCGIKMVREAHGWSLRVGYTGETS 525

Query: 405 GVNALMHMYINCGDLVAAFSLLQR------ISHNSDTSC--------------------- 437
             NA++  Y+ CG    A  L +       ++ N   SC                     
Sbjct: 526 VANAILDAYVKCGYSHDANILFRNHGGRNTVTDNIMISCYLKNNCIEDAEVIFNHMAEKD 585

Query: 438 ---WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN++I    QN    +A   F  + Q +   PD V++ N++ AC +L      +  H
Sbjct: 586 LTSWNLMIQLYAQNHMDDQAFSLFNHL-QSEGLKPDLVSITNILEACIHLCSVQLVRQCH 644

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              L++ +  D  ++ AL+  Y +C +I +A  +FE     +L T+  MI  ++ +    
Sbjct: 645 AYMLRASLE-DIHLEGALVDAYSKCGNITNAYNIFEVSSK-DLVTFTAMIGCYAMHGMAE 702

Query: 555 RALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL------------- 598
           +A+ELF     L+  P+ + + ++LSAC+  G++  G +I   +  +             
Sbjct: 703 KAVELFSKMIKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIGEIHRVVPTAEHYACM 762

Query: 599 -------GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
                  G  +++++ +  LDM  +  +  AWSS++ A   HG+
Sbjct: 763 VDLLARSGHLQDAYMFA--LDMPPHAVNANAWSSLLGACKVHGE 804



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 197/434 (45%), Gaps = 52/434 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  S +L+T YS V   ++  ++F     +D+V+WN +I   V N      L  F
Sbjct: 316 GLEMDVSVSNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAGYVMNGYHYRALGLF 375

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI-KAGMIADSSLCNVFVNMYAK 120
            E++  GI  DS + + +++A  Q+  +K G  VH   + +  ++ ++SL N  V  Y+ 
Sbjct: 376 HELLSTGIAPDSVSFISLLTACAQVGDVKAGMGVHGYILQRPVLLQETSLMNALVTFYSH 435

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSS 179
           C   + +   F+ +   D++SWN I+S C H+  + EK  +   EM     Q D+V++ +
Sbjct: 436 CDRFDDAFRAFTDILNKDSISWNAILSACAHSEQHIEKFFVLMSEMCRGVNQWDSVTVLN 495

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD------------- 226
            +  S   G +   +  H   +++GY      SV N+++  Y +CG              
Sbjct: 496 VIHVSTFCG-IKMVREAHGWSLRVGYTGE--TSVANAILDAYVKCGYSHDANILFRNHGG 552

Query: 227 ------------------IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
                             IE AE  F  M  KD+ SWN +I  +A N   ++AF L + +
Sbjct: 553 RNTVTDNIMISCYLKNNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNHMDDQAFSLFNHL 612

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    ++PD+ ++  ++  C     ++  R  H Y +R  L  D+ +  +L+D YSK  +
Sbjct: 613 Q-SEGLKPDLVSITNILEACIHLCSVQLVRQCHAYMLRASL-EDIHLEGALVDAYSKCGN 670

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
           ++ A  +F   +   DLV++ +MI              LF +M+ L  +     L  +L 
Sbjct: 671 ITNAYNIFEVSS--KDLVTFTAMIGCYAMHGMAEKAVELFSKMIKLDIRPDHVVLTTLLS 728

Query: 377 SCNSPESLEFGKSI 390
           +C+    ++ G  I
Sbjct: 729 ACSHAGLVDAGIKI 742


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 218/694 (31%), Positives = 356/694 (51%), Gaps = 41/694 (5%)

Query: 114  FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQA 172
             +  YA  G  +SS   F      D+  +  ++   +  +  +  + LY R +    + +
Sbjct: 598  LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQIS 657

Query: 173  DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
              V  S   A +     LS G+ +H   IK G +D   +    SL+ MY Q G++  AE+
Sbjct: 658  KFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIE--TSLLCMYGQTGNLSDAEK 715

Query: 233  AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
             F GM  +D+V+W+ ++     N +  +A  +   M +   VEPD  T+++++  CA+  
Sbjct: 716  VFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCM-VDDGVEPDAVTMISVVEGCAELG 774

Query: 293  LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             LR  RSVHG   R++  +D  + NSL+  YSK   L  +E +F  IA  N  VSW +MI
Sbjct: 775  CLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKN-AVSWTAMI 833

Query: 353  SGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
            S              F EML    + +  TL +IL SC     +  GKS+H + ++    
Sbjct: 834  SSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELD 893

Query: 401  NNTIGVN-ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             N   ++ AL+ +Y  CG L    ++L  +  + +   WN  I      G   EA+  F+
Sbjct: 894  PNYESLSPALVELYAECGRLGDCETILHVVG-DRNIVLWNSHISLYAHRGMVIEALCLFR 952

Query: 460  SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
             M   +   PDS TL ++ISAC N  L   GK +HG  +++ +  D  VQN++I MY + 
Sbjct: 953  QMVTWR-IKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKS 1010

Query: 520  RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
              +  A TVF+   + ++ TWN M+  FSQN   + A+ LF ++     E N+++ ++++
Sbjct: 1011 GFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVI 1070

Query: 577  SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             AC+ +G L  G+ +H  +   G + + F  +AL+DMY+ C               +S  
Sbjct: 1071 QACSSIGSLEKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIV 1129

Query: 622  AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            +WSSMI+AYG HG+   AI  F++M  SG +P +   +++LSAC HSG V+EG +YY N+
Sbjct: 1130 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNL 1188

Query: 682  LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            ++ + V P +EH  C +D+L RSG L+EAY  IK +P      VWG++++ C  H    +
Sbjct: 1189 MKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 1248

Query: 742  GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
             K +   +  +  ++ GYY  LSN+Y   G W++
Sbjct: 1249 IKAIKNDISDIVTDDTGYYTLLSNIYAEEGEWEE 1282



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 281/551 (50%), Gaps = 24/551 (4%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            TSLL  Y        +  +F     +D+V W+ ++++C+EN  V+  L  F  MV++G+ 
Sbjct: 698  TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVE 757

Query: 71   FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             D+ T++ +V    ++ CL+  R VH    +     D +LCN  + MY+KCGDL SSE  
Sbjct: 758  PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKI 817

Query: 131  FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            F  +   + VSW  ++S      + EK L  F EM  SG + + V+L S +++    G +
Sbjct: 818  FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLI 877

Query: 191  SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              GK +H   I+    D  Y S++ +L+ +Y++CG +   E     +  +++V WN+ I 
Sbjct: 878  REGKSVHGFAIRREL-DPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHIS 936

Query: 251  GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             +A  G   EA  L  +M   R ++PD  T+ ++IS C ++ L+R G+ +HG+ IR  + 
Sbjct: 937  LYAHRGMVIEALCLFRQMVTWR-IKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS 995

Query: 311  YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             D  + NS++D YSKS  ++ A  +F+ I     +V+WNSM+ G            LF  
Sbjct: 996  -DEFVQNSVIDMYSKSGFVNLACTVFDQIK-HRSIVTWNSMLCGFSQNGNSLEAINLFDY 1053

Query: 359  MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
            M + C + +  T LA++ +C+S  SLE G+ +H   +  G   +     AL+ MY  CGD
Sbjct: 1054 MYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGD 1112

Query: 419  LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
            L  A ++ + +S+ S  S W+ +I A   +G    AI TF  M  +    P+ V  +NV+
Sbjct: 1113 LNTAETVFRAMSNRSIVS-WSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNVL 1170

Query: 479  SACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESCYNC 535
            SACG+     EGK  +   L  L G+    ++    I +  R  D+K A  T+ E  +  
Sbjct: 1171 SACGHSGSVEEGK--YYFNLMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 1228

Query: 536  NLCTWNCMISA 546
            +   W  +++ 
Sbjct: 1229 DASVWGSLVNG 1239



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 177/628 (28%), Positives = 309/628 (49%), Gaps = 28/628 (4%)

Query: 7    LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
            LP  T L+ +Y+ +   +SS  +F      D   +  +I   V    +   +  +  +V 
Sbjct: 593  LPV-TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVS 651

Query: 67   EGIRFDSTTLLIIVSALT-QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            E  +        ++ A       L  GR VH   IK+G+  D+ +    + MY + G+L+
Sbjct: 652  EKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLS 711

Query: 126  SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
             +E  F GM   D V+W+T++S CL N    K L  F+ M   G + D V++ S V   A
Sbjct: 712  DAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCA 771

Query: 186  CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             LG L   + +H    +  ++     ++ NSL++MYS+CGD+ ++E+ F  +  K+ VSW
Sbjct: 772  ELGCLRIARSVHGQITRKMFDFDE--TLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSW 829

Query: 246  NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             A+I  +      E+A     EM L   +EP++ T+ +++S C  + L+REG+SVHG+AI
Sbjct: 830  TAMISSYNRGEFSEKALRSFSEM-LKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAI 888

Query: 306  RRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
            RR L  +   ++ +L++ Y++   L   E + + +   N +V WNS IS           
Sbjct: 889  RRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRN-IVLWNSHISLYAHRGMVIEA 947

Query: 354  -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              LF++M+    +    TL +I+ +C +   +  GK IH   ++   S+  +  N+++ M
Sbjct: 948  LCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFVQ-NSVIDM 1006

Query: 413  YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
            Y   G +  A ++  +I H S  + WN ++   +QNG+  EAI  F  M        + V
Sbjct: 1007 YSKSGFVNLACTVFDQIKHRSIVT-WNSMLCGFSQNGNSLEAINLFDYM-YHSCLEINKV 1064

Query: 473  TLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFES 531
            T + VI AC ++    +G+ +H   +  + G+ D     ALI MY +C D+ +A TVF +
Sbjct: 1065 TFLAVIQACSSIGSLEKGRWVHHKLI--VCGIKDLFTDTALIDMYAKCGDLNTAETVFRA 1122

Query: 532  CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
              N ++ +W+ MI+A+  +     A+  F  +     +PNE+  +++LSAC   G +  G
Sbjct: 1123 MSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 1182

Query: 589  KQIHGHVFHLGFQENSFISSALLDMYSN 616
            K     +   G   NS   +  +D+ S 
Sbjct: 1183 KYYFNLMKLFGVSPNSEHFACFIDLLSR 1210



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 169/350 (48%), Gaps = 15/350 (4%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
            S +L+  Y+          + +   ++++V WN+ I+       V+  L  F +MV   I
Sbjct: 900  SPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRI 959

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            + DS TL  I+SA      ++ G+ +H   I+   ++D  + N  ++MY+K G +N +  
Sbjct: 960  KPDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDEFVQNSVIDMYSKSGFVNLACT 1018

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             F  +     V+WN+++ G   N    + +  F  M  S  + + V+  + + A + +G 
Sbjct: 1019 VFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGS 1078

Query: 190  LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            L  G+ +H   I  G +D   +    +LI MY++CGD+  AE  F  M+ + +VSW+++I
Sbjct: 1079 LEKGRWVHHKLIVCGIKD---LFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMI 1135

Query: 250  DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            + + ++G+   A    ++M +    +P+    + ++S C  S  + EG+  + + + +L 
Sbjct: 1136 NAYGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGHSGSVEEGK--YYFNLMKLF 1192

Query: 310  GYDLLMMNS-----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G   +  NS      +D  S+S  L +A      +  + D   W S+++G
Sbjct: 1193 G---VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 1239



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 4    LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
            +  L T T+L+  Y+      ++  +F    N+ +V+W++MI A   +  +   +  F +
Sbjct: 1094 IKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQ 1153

Query: 64   MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
            MVE G + +    + ++SA      +++G+    L    G+  +S     F+++ ++ GD
Sbjct: 1154 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFIDLLSRSGD 1213

Query: 124  LNSSECTFSGMH-CADTVSWNTIMSGC 149
            L  +  T   M   AD   W ++++GC
Sbjct: 1214 LKEAYRTIKEMPFLADASVWGSLVNGC 1240


>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
          Length = 836

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 234/740 (31%), Positives = 366/740 (49%), Gaps = 83/740 (11%)

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQAD 173
           ++MY + G L  +   F  M C+D V  N +++              FR M  SG +++ 
Sbjct: 1   MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60

Query: 174 NVSLSSAVAASAC--LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD---IE 228
             +++ AV    C  L  L  G+ IH   IK G E        N+L+SMY++CG    ++
Sbjct: 61  PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSG--NALVSMYAKCGGSIAMD 118

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A  AF  + CKDVVSWN+II G++ NG FEEA  L  +M +     P+ +T+  ++  C
Sbjct: 119 DAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQM-ISEECLPNYSTLANVLPFC 177

Query: 289 ADSLLLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           +     R  G+ +HG+ +R  L  D+ + N+LM  YSK   +   E +F + + M D+V+
Sbjct: 178 SLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRS-SKMGDIVT 236

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN++I+G            LF+ +L+        +L+++L +C    +L  G  +H +  
Sbjct: 237 WNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIF 296

Query: 396 K-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +       T  +NAL+  Y  C    AAF     I  N D+  WN ++ AC  + H  E 
Sbjct: 297 RHPELLQETSLMNALVSFYSQCDRFDAAFRSFITI-QNKDSVSWNAILSACANSEHHIEQ 355

Query: 455 IKTFKSMTQQQNASPDSVTLVNVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
                          DSVT++N+I   + CG +++  E    HG +L+     D+ V NA
Sbjct: 356 FFRLLGEMWHDVTQWDSVTILNIIRMSTFCG-IKMVQES---HGYSLRVGYTGDSSVANA 411

Query: 512 LITMYGRCRDIKSASTVFES--------------CY---NC--------------NLCTW 540
           ++  Y +C  +  A T+F S              CY   NC              +L TW
Sbjct: 412 ILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTW 471

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N M   ++QN    +A  LF  L+ E   P+ ISI +ILSAC  L  ++  KQ HG++  
Sbjct: 472 NLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLR 531

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
               E+  +  ALLD YS C               K    +++MI AY  HG   +A+EL
Sbjct: 532 ASL-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVEL 590

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M    I+P    + +LLSACSH+GLVD G++ + ++ E Y V P  EH  C+VD+L 
Sbjct: 591 FSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLA 650

Query: 703 RSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           RSG+LQ+AY F  ++P        WG++L AC  HG+ K+G+  A+ LF +E E++G Y+
Sbjct: 651 RSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYV 710

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            +SN++ A  +W+    + K
Sbjct: 711 IMSNIFAADDKWESVEHVRK 730



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 180/694 (25%), Positives = 319/694 (45%), Gaps = 85/694 (12%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD---S 73
           Y  +     +  +F E    D V  N +ITA           H F  M+  G+      +
Sbjct: 4   YGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTA 63

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD---LNSSECT 130
            T+ +++    ++  L+ GR +H   IK G+  D+   N  V+MYAKCG    ++ +   
Sbjct: 64  VTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLA 123

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS + C D VSWN+I++G   N   E+ L  F +M  S E   N S  + V     L E 
Sbjct: 124 FSTICCKDVVSWNSIIAGYSENGLFEEALALFGQM-ISEECLPNYSTLANVLPFCSLVEY 182

Query: 191 S--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
              YGK IH   ++ G E    +SV+N+L++ YS+  ++ A E  F      D+V+WN +
Sbjct: 183 GRHYGKEIHGFVVRHGLEMD--ISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+ +N     A  L   + L   + PD  ++++L++ CA    LR G  VHGY  R  
Sbjct: 241 IAGYVMNRYPSRALKLFQGL-LFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHP 299

Query: 309 -LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------- 354
            L  +  +MN+L+ FYS+ +    A   F  I    D VSWN+++S              
Sbjct: 300 ELLQETSLMNALVSFYSQCDRFDAAFRSFITIQN-KDSVSWNAILSACANSEHHIEQFFR 358

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L  EM +  +Q+   T+L I+   ++   ++  +  H + L++G++ ++   NA++  Y 
Sbjct: 359 LLGEMWHDVTQWDSVTILNII-RMSTFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYA 417

Query: 415 NCGDLVAAFSLLQRISHNS------------------------------DTSCWNIVIVA 444
            CG L  A +L + ++  +                              D + WN++   
Sbjct: 418 KCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRL 477

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             QN    +A   F  + Q +  +PD++++ N++SAC +L      K  HG  L++ +  
Sbjct: 478 YAQNDLCDQAFCLFHQL-QSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE- 535

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH-- 562
           D  ++ AL+  Y +C +I +A  +F+   + +L  +  MI A++ +    +A+ELF    
Sbjct: 536 DIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKML 595

Query: 563 -LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL--------------------GFQ 601
            L+ +P+ + + ++LSAC+  G++  G +I   +  +                    G  
Sbjct: 596 TLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRL 655

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
           ++++  S  LDM  +  +  AW S++ A   HG+
Sbjct: 656 QDAY--SFALDMPPHVVNANAWGSLLGACKVHGE 687



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 222/498 (44%), Gaps = 53/498 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  S +L+  YS V    +  ++F  +   D+VTWN +I   V NR     L  F
Sbjct: 198 GLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLF 257

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAK 120
             ++  G+  DS +L+ +++A  Q+  L+ G  VH    +   ++ ++SL N  V+ Y++
Sbjct: 258 QGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQ 317

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSS 179
           C   +++  +F  +   D+VSWN I+S C ++ ++ E+      EM     Q D+V++ +
Sbjct: 318 CDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILN 377

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD------------- 226
            +  S   G +   +  H   +++GY      SV N+++  Y++CG              
Sbjct: 378 IIRMSTFCG-IKMVQESHGYSLRVGYTGDS--SVANAILDAYAKCGYLHDAETLFRSLAG 434

Query: 227 ------------------IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
                             +E AE  F  M  KD+ +WN +   +A N   ++AF L H++
Sbjct: 435 RNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQL 494

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    + PD  ++  ++S C     ++  +  HGY +R  L  D+ +  +L+D YSK  +
Sbjct: 495 Q-SEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE-DIHLEGALLDAYSKCGN 552

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           ++ A  LF  ++   DLV + +MI              LF +ML L  +     L A+L 
Sbjct: 553 IANAYNLFQ-VSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLS 611

Query: 377 SCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL-LQRISHNSD 434
           +C+    ++ G K     +   G          ++ +    G L  A+S  L    H  +
Sbjct: 612 ACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVN 671

Query: 435 TSCWNIVIVACTQNGHFQ 452
            + W  ++ AC  +G  +
Sbjct: 672 ANAWGSLLGACKVHGEVK 689



 Score = 42.4 bits (98), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  +    +LL AYS      ++  LF  + +KD+V + AMI A   +      +  
Sbjct: 531 RASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVEL 590

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+   I+ D   L  ++SA +    +  G ++   +    G+      C   V++ A
Sbjct: 591 FSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLA 650

Query: 120 KCGDLNSSECTFSGM--HCADTVSWNTIMSGC 149
           + G L  +      M  H  +  +W +++  C
Sbjct: 651 RSGRLQDAYSFALDMPPHVVNANAWGSLLGAC 682


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 244/865 (28%), Positives = 404/865 (46%), Gaps = 114/865 (13%)

Query: 18  SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL 77
           + VSY E      + +  KDV  WN+M++           L  F  + E  I  +  T  
Sbjct: 109 AQVSYAEKQ----FNSLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFS 164

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           I++S   +   ++ GR +HC  IK G+  +S      V+MYAKC  L  ++  F G+   
Sbjct: 165 IVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDP 224

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL------- 190
           +TV W  + SG +    PE+ ++ F  M   G + D+++  + +     LG+L       
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLF 284

Query: 191 --------------------------------------------SYGKVIHALGI----- 201
                                                       + G V+ A+GI     
Sbjct: 285 GEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLD 344

Query: 202 ----------KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
                     KLG   + YV   +SL+SMYS+C  +EAA + F  +  ++ V WNA+I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVG--SSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRG 402

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG+  +  +L  +M+       D  T  +L+S CA S  L  G   H   I++ L  
Sbjct: 403 YAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTK 461

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYL-- 362
           +L + N+L+D Y+K  +L  A  +F  +    D VSWN++I G  ++        L++  
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFEHMCD-RDNVSWNTIIGGYVQDENESEAFDLFMRM 520

Query: 363 --CSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
             C   S    LA  L +C +   L  GK +HC  +K G        ++L+ MY  CG +
Sbjct: 521 NSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGII 580

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +   S  S  N +I   +QN + +EA+  F+ M   +  +P  +T   ++ 
Sbjct: 581 EDARKVFSSMPEWSVVSM-NALIAGYSQN-NLEEAVVLFQEML-TKGVNPSEITFATIVE 637

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQN---ALITMYGRCRDIKSASTVF-ESCYNC 535
           AC   E    G   HG  +K   G  +  +    +L+ +Y   R +  A  +F E     
Sbjct: 638 ACHKPESLTLGTQFHGQIIK--WGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPK 695

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIH 592
           ++  W  M+S  SQN     AL+ ++ +  +   P++ + V++L  C+ L  LR G+ IH
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIH 755

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSN-AAWSSMISAYGYHGKG 636
             +FHL    +   S+ L+DMY+ C               +SN  +W+S+I+ Y  +G  
Sbjct: 756 SLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYA 815

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +A+++F  M  S I P + + + +L+ACSH+G V +G + +  M+ +Y +    +H  C
Sbjct: 816 EDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVAC 875

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+LGR G LQEA +FI+   ++P   +W ++L AC  HGD   G+  AE L +LEP+N
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQN 935

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              Y+ LSN+Y + GRW++A  + K
Sbjct: 936 SSAYVLLSNIYASQGRWEEANALRK 960



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 207/705 (29%), Positives = 341/705 (48%), Gaps = 63/705 (8%)

Query: 5   AHLPTSTSLLT---AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            H P   + +T    Y ++   + +  LF E  + DVV WN MI+   +  C ++ + +F
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYF 315

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +  ++   +TL  ++SA+  +  L  G VVH  +IK G+ ++  + +  V+MY+KC
Sbjct: 316 LNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + ++   F  +   + V WN ++ G  HN    K +  F +M  SG   D+ + +S +
Sbjct: 376 EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A   +L  G   H++ IK     + +V   N+L+ MY++CG +E A + F  M  +D
Sbjct: 436 STCAVSHDLEMGSQFHSIIIKKKLTKNLFVG--NALVDMYAKCGALEDARQIFEHMCDRD 493

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II G+  +    EAFDL   M     +  D A + + +  C +   L +G+ VH
Sbjct: 494 NVSWNTIIGGYVQDENESEAFDLFMRMNSC-GIVSDGACLASTLKACTNVHGLYQGKQVH 552

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             +++  L   L   +SL+D YSK   +  A  +F+++ P   +VS N++I+G       
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM-PEWSVVSMNALIAGYSQNNLE 611

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT--IGVNA 408
               LF+EML      S  T   I+ +C+ PESL  G   H   +K GFS+    +G+ +
Sbjct: 612 EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGI-S 670

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y+N   +  A +L   +S       W  ++   +QNG ++EA+K +K M +   A 
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM-RHDGAL 729

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD  T V V+  C  L    EG+++H L       LD    N LI MY +C D+KS+S V
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQV 789

Query: 529 F-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGV 584
           F E     N+ +WN +I+ +++N     AL++F   R     P+EI+ + +L+AC+  G 
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849

Query: 585 LRHGKQ----------IHGHVFHLG-----------FQE-NSFISSALLDMYSNCKSNAA 622
           +  G++          I   V H+             QE + FI +       N K +A 
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEA------QNLKPDAR 903

Query: 623 -WSSMISAYGYHG---KGWEAIELFHEMCNSGIRPTKSSVISLLS 663
            WSS++ A   HG   +G  A E   E+      P  SS   LLS
Sbjct: 904 LWSSLLGACRIHGDDMRGEIAAERLIEL-----EPQNSSAYVLLS 943



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/593 (27%), Positives = 274/593 (46%), Gaps = 23/593 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++   +SL++ YS     E++  +F     ++ V WNAMI     N      +  F
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELF 416

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G   D  T   ++S     + L+ G   H + IK  +  +  + N  V+MYAKC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKC 476

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D VSWNTI+ G + +    +    F  M   G  +D   L+S +
Sbjct: 477 GALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTL 536

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   +  L  GK +H L +K G +    +   +SLI MYS+CG IE A + F  M    
Sbjct: 537 KACTNVHGLYQGKQVHCLSVKCGLD--RVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWS 594

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS NA+I G++ N   EEA  L  EM L + V P   T  T++  C     L  G   H
Sbjct: 595 VVSMNALIAGYSQN-NLEEAVVLFQEM-LTKGVNPSEITFATIVEACHKPESLTLGTQFH 652

Query: 302 GYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           G  I+     +   +  SL+  Y  S  +++A  LF+ ++    +V W  M+SG      
Sbjct: 653 GQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGF 712

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  +KEM +  +    +T + +L  C+   SL  G++IH     L    + +  N 
Sbjct: 713 YEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNT 772

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGD+ ++  +   +   S+   WN +I    +NG+ ++A+K F SM +Q +  
Sbjct: 773 LIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQSHIM 831

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRCRDIKSAS 526
           PD +T + V++AC +     +G+ +  + +    G++ RV +   ++ + GR   ++ A 
Sbjct: 832 PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY-GIEARVDHVACMVDLLGRWGYLQEAD 890

Query: 527 TVFESC-YNCNLCTWNCMISAFSQNKAEVRA-LELFRHLEFEPNEISIVSILS 577
              E+     +   W+ ++ A   +  ++R  +   R +E EP   S   +LS
Sbjct: 891 DFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLS 943



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 170/683 (24%), Positives = 298/683 (43%), Gaps = 81/683 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ VH  S+  G+ ++  L N  V++YAKC  ++ +E  F+ +   D  +WN+++S 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                 P K L  F  +  +    +  + S  ++ SA    + +G+ IH   IK+G E +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            Y     +L+ MY++C  +  A+R F G+   + V W  +  G+   G  EEA  +   M
Sbjct: 195 SYCG--GALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +      PD    VT+I+                                    Y     
Sbjct: 253 R-GEGHRPDHLAFVTVINT-----------------------------------YISLGK 276

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A LLF  + P  D+V+WN MISG             F  M     + + STL ++L 
Sbjct: 277 LKDARLLFGEM-PSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLS 335

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +     +L+ G  +H   +KLG ++N    ++L+ MY  C  + AA  + + +   +D  
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDV- 394

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSL 493
            WN +I     NG   + ++ F  M +    + D  T  +++S C    +LE+   G   
Sbjct: 395 LWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAVSHDLEM---GSQF 450

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H + +K  +  +  V NAL+ MY +C  ++ A  +FE   + +  +WN +I  + Q++ E
Sbjct: 451 HSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENE 510

Query: 554 VRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A +LF  +       +   + S L ACT +  L  GKQ+H      G        S+L
Sbjct: 511 SEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSL 570

Query: 611 LDMYSNC----------KSNAAWS-----SMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMYS C           S   WS     ++I+ Y  +    EA+ LF EM   G+ P++
Sbjct: 571 IDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSE 629

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQEAYEFI 714
            +  +++ AC     +  G Q++  ++ ++    E E+  + ++ +   S ++ EA    
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQII-KWGFSSEGEYLGISLLGLYMNSRRMAEACALF 688

Query: 715 KNLPIQPKPGVWGAMLSACSHHG 737
             L       +W  M+S  S +G
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNG 711



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 215/463 (46%), Gaps = 82/463 (17%)

Query: 291 SLLLREGRSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +L LR G++VH  ++  +LG D    + N+++D Y+K   +S AE  FN++    D+ +W
Sbjct: 73  ALALRIGKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE--KDVTAW 128

Query: 349 NSMIS----------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           NSM+S                 LF+ +++  ++F+FS    +L +     ++EFG+ IHC
Sbjct: 129 NSMLSMYSSIGQPGKVLRSFVSLFENLIF-PNKFTFSI---VLSTSARETNVEFGRQIHC 184

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K+G   N+    AL+ MY  C  L  A  +   I  + +T CW  +     + G  +
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIV-DPNTVCWTCLFSGYVKAGLPE 243

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           EA+  F+ M + +   PD +  V VI                               N  
Sbjct: 244 EAVIVFERM-RGEGHRPDHLAFVTVI-------------------------------NTY 271

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNE 569
           I++ G+ +D   A  +F    + ++  WN MIS   +   E+ A+E F   R    +   
Sbjct: 272 ISL-GKLKD---ARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTR 327

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            ++ S+LSA   +  L  G  +H     LG   N ++ S+L+ MYS C            
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +++  W++MI  Y ++G+  + +ELF +M +SG      +  SLLS C+ S  ++ G
Sbjct: 388 LEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMG 447

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            Q+++ ++++   +     +  +VDM  + G L++A +  +++
Sbjct: 448 SQFHSIIIKKKLTKNLFVGN-ALVDMYAKCGALEDARQIFEHM 489



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 34/315 (10%)

Query: 490 GKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           GK++H  +L  ++G+D+  R+ NA++ +Y +C  +  A   F S    ++  WN M+S +
Sbjct: 79  GKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEK-DVTAWNSMLSMY 135

Query: 548 S---QNKAEVRA-LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           S   Q    +R+ + LF +L F PN+ +   +LS   +   +  G+QIH  +  +G + N
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIF-PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 604 SFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           S+   AL+DMY+ C                +   W+ + S Y   G   EA+ +F  M  
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G RP   + +++++     G + +    +  M       P+      ++   G+ G   
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCEI 309

Query: 709 EAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-PENVGYYISLS 764
            A E+  N+    ++      G++LSA     +  +G  V     KL    N+    SL 
Sbjct: 310 VAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369

Query: 765 NMYVALGRWKDAVEI 779
           +MY    + + A ++
Sbjct: 370 SMYSKCEKMEAAAKV 384



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 29/213 (13%)

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAY 630
           LR GK +H     LG      + +A++D+Y+ C              K   AW+SM+S Y
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVTAWNSMLSMY 135

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
              G+  + +  F  +  + I P K +   +LS  +    V+ G Q + +M+ +  +   
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMI-KMGLERN 194

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG-KQVAELL 749
           +     +VDM  +  +L +A      + + P    W      C   G  K G  + A ++
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGI-VDPNTVCW-----TCLFSGYVKAGLPEEAVIV 248

Query: 750 FKL------EPENVGYYISLSNMYVALGRWKDA 776
           F+        P+++  ++++ N Y++LG+ KDA
Sbjct: 249 FERMRGEGHRPDHLA-FVTVINTYISLGKLKDA 280


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 200/614 (32%), Positives = 320/614 (52%), Gaps = 39/614 (6%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           HA  I  G+ +   +S+   L    S  G I  A   F  +   DV  +N ++ GF++N 
Sbjct: 40  HAQIILHGFRND--ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
               +  +   ++    ++P+ +T    IS  +     R GR +HG A+      +LL+ 
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------C 363
           ++++  Y K   +  A  +F+ + P  D + WN+MISG  K  +Y+             C
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRM-PEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           ++   +TLL ILP+    + L  G  IH    K G  ++   +   + +Y  CG +    
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           +L +      D   +N +I   T NG  + ++  FK +     A   S TLV+++   G+
Sbjct: 277 ALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGARLRSSTLVSLVPVSGH 334

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L L +   ++HG  LKS       V  AL T+Y +  +I+SA  +F+     +L +WN M
Sbjct: 335 LMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS ++QN     A+ LFR +   EF PN ++I  ILSAC QLG L  GK +H  V    F
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           + + ++S+AL+ MY+ C               K+   W++MIS YG HG+G EA+ +F+E
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M NSGI PT  + + +L ACSH+GLV EG + +N+M+  Y   P  +H+ C+VD+LGR+G
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            LQ A +FI+ + I+P   VW  +L AC  H DT + + V+E LF+L+P+NVGY++ LSN
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631

Query: 766 MYVALGRWKDAVEI 779
           ++ A   +  A  +
Sbjct: 632 IHSADRNYPQAATV 645



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 257/598 (42%), Gaps = 65/598 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   T L    S++     +  +F      DV  +N ++     N      L  F
Sbjct: 47  GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             + +   ++ +S+T    +SA +     + GRV+H  ++  G  ++  L +  V MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
              +  +   F  M   DT+ WNT++SG   N    + +  FR++   S  + D  +L  
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A L EL  G  IH+L  K G     Y  V    IS+YS+CG I+     F     
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDY--VLTGFISLYSKCGKIKMGSALFREFRK 284

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQL----MRSVEPDIATVVTLISLCADSLLLR 295
            D+V++NA+I G+  NG+ E +  L  E+ L    +RS     +T+V+L+ +    +L+ 
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS-----STLVSLVPVSGHLMLI- 338

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
              ++HGY ++        +  +L   YSK N +  A  LF+  +P   L SWN+MISG 
Sbjct: 339 --YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWNAMISGY 395

Query: 355 -----------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                      LF+EM    S+FS +  T+  IL +C    +L  GK +H       F +
Sbjct: 396 TQNGLTEDAISLFREMQK--SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +     AL+ MY  CG +  A  L   ++  ++ + WN +I     +G  QEA+  F  M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQGQEALNIFYEM 512

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 +P  VT + V+ AC +  L  EG  +                N++I  YG    
Sbjct: 513 L-NSGITPTPVTFLCVLYACSHAGLVKEGDEIF---------------NSMIHRYG---- 552

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                      +  ++  + CM+    +     RAL+    +  EP      ++L AC
Sbjct: 553 -----------FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 220/724 (30%), Positives = 375/724 (51%), Gaps = 47/724 (6%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           VVH   I +G+  D+ L N+ +N+Y++ G +  +   F  M   + V+W+T++S C H+ 
Sbjct: 65  VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHG 124

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK----VIHALGIKLGYEDSP 209
           + E+ L+ F +   + + + N  + S+    AC G    G+     + +  +K  ++   
Sbjct: 125 FYEESLVVFLDFWRTRKNSPNEYILSSFI-QACSGLDGSGRWMVFQLQSFLVKSRFDRDV 183

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           YV     LI  Y + G+I+ A   F  +  K  V+W  +I G    G+   +  L +  Q
Sbjct: 184 YVGTL--LIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY--Q 239

Query: 270 LMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           LM  +V PD   + T++S C+    L  G+ +H + +R     D  +MN L+D Y K   
Sbjct: 240 LMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCS---QFSFSTLL----AILP 376
           +  A  LF+ + P  +++SW +++SG     L KE + L +   +F     +    +IL 
Sbjct: 300 VRAAHKLFDGM-PNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILT 358

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           SC S  +LEFG  +H + +K    N++   N+L+ MY  C  L  A  +   I    D  
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFD-IFAADDVV 417

Query: 437 CWNIVIVACTQNG---HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            +N +I   ++ G      +A+  F  M + +   P  +T V+++ A  +L      K +
Sbjct: 418 LFNAMIEGYSRLGTQWELHDALNIFHDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HGL  K  + LD    +ALI +Y  C  +K +  VF+     +L  WN M S + Q    
Sbjct: 477 HGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSEN 536

Query: 554 VRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL LF  L+     P+E + V +++A   L  L+ G++ H  +   G + N +I++AL
Sbjct: 537 EEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNAL 596

Query: 611 LDMYSNCKS---------NAA------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           LDMY+ C S         +AA      W+S+IS+Y  HG+G +A+++  +M   GI P  
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNY 656

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + + +LSACSH+GLV++GL+ +  ML  + + PETEH+VC+V +LGR+G+L EA E I+
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIE 715

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P +P   VW ++LS C+  G+ ++ +  AE+    +P++ G +  LSN+Y + G W D
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTD 775

Query: 776 AVEI 779
           A ++
Sbjct: 776 AKKV 779



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 185/693 (26%), Positives = 320/693 (46%), Gaps = 64/693 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC----VENRCVVMGLHFFGEMV 65
           S  L+  YS       +  +F +   +++VTW+ M++AC         +V+ L F+    
Sbjct: 82  SNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW---- 137

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLK-QGR----VVHCLSIKAGMIADSSLCNVFVNMYAK 120
               R +S    I+ S +   + L   GR     +    +K+    D  +  + ++ Y K
Sbjct: 138 --RTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLK 195

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G+++ +   F  +    TV+W T++SGC+        L  F ++       D   LS+ 
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTV 255

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A + L  L  GK IHA  ++ G+E     S+ N LI  Y +CG + AA + F GM  K
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKD--ASLMNVLIDSYVKCGRVRAAHKLFDGMPNK 313

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +++SW  ++ G+  N   +EA +L   M     ++PD+    ++++ CA    L  G  V
Sbjct: 314 NIISWTTLLSGYKQNSLHKEAMELFTSMPKF-GLKPDMFACSSILTSCASLHALEFGTQV 372

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y I+  LG D  + NSL+D Y+K + L++A  +F+  A  +D+V +N+MI G      
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAA-DDVVLFNAMIEGYSRLGT 431

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +F +M +   + S  T +++L +  S  SL   K IH    K G + +   
Sbjct: 432 QWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFA 491

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL+ +Y NC  L  +  +   +    D   WN +     Q    +EA+  F  + Q  
Sbjct: 492 GSALIAVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFSGYVQQSENEEALNLFLEL-QLS 549

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD  T V++++A GNL     G+  H   LK  +  +  + NAL+ MY +C   + A
Sbjct: 550 RDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQL 582
              F+S  + ++  WN +IS+++ +    +AL++   +     EPN I+ V +LSAC+  
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHA 669

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G +    +   G +  +                  +  M+S  G  G+  EA EL
Sbjct: 670 GLVEDGLKQFELMLRFGIEPET----------------EHYVCMVSLLGRAGRLNEAREL 713

Query: 643 FHEMCNSGIRPTKSSVI---SLLSACSHSGLVD 672
             +M      PTK + I   SLLS C+ +G V+
Sbjct: 714 IEKM------PTKPAAIVWRSLLSGCAKAGNVE 740



 Score = 45.8 bits (107), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +   + +LL  Y+     E +   F    ++DVV WN++I++   +      L  
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQM 643

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +M+ EGI  +  T + ++SA +    ++ G     L ++ G+  ++      V++  +
Sbjct: 644 LEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGR 703

Query: 121 CGDLNSSECTFSGMHCAD-TVSWNTIMSGC 149
            G LN +      M      + W +++SGC
Sbjct: 704 AGRLNEARELIEKMPTKPAAIVWRSLLSGC 733


>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
 gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
          Length = 785

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 218/789 (27%), Positives = 384/789 (48%), Gaps = 75/789 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      + +   F     K+V TW A+I  C ++ C  + +    +M+ EG++ D
Sbjct: 36  LIHTYGKCHSLDDAWETFERMSYKNVYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPD 95

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TLL   +ALT                                MY  CG ++ ++  F 
Sbjct: 96  NITLL---AALT--------------------------------MYGSCGSVDDAKRVFD 120

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + ++W T M G       E+    FR M   G +++ V+  + V A +    L  
Sbjct: 121 AMPARNVITW-TAMIGAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEV 179

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G ++H   ++     +    + N+LI+MY +CG +E A   F  M  +D+++WNA+I  +
Sbjct: 180 GIILHMRSVE--SSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEY 237

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G  EEA  LL+++ L    +PD  T V L+++      L E + VH + +   +  +
Sbjct: 238 GQHGHVEEAV-LLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSIN 296

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFS 367
           + +  +L+  YSK  SL     LF  + P  +++SWN M++     GL ++ + +     
Sbjct: 297 IALGTALVAMYSKCESLEDTRWLFEKM-PQRNVISWNVMVTAYAKHGLGRKAVQITEYMQ 355

Query: 368 FS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T + +L  C     L+ G+ +H W  +     + I  N+L++MY  CG++ 
Sbjct: 356 LDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVE 415

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   I   +  S W  ++ A ++      A+  F ++       P  +T +  + A
Sbjct: 416 QAEMVFDGILQRNVIS-WTAMLTAYSRQNRQDMALLLFHAI-HLSGVKPTCITFLEALDA 473

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCT 539
           C   E   +G+ +H  A++S   +D  + +AL+ MYGRC  I+ A   F+      N  T
Sbjct: 474 CVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVT 533

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVF 596
           W+ MI+AF Q+  +   L+  R ++ +  ++S     S LSAC+ L  LR GK+IH +V 
Sbjct: 534 WSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVR 593

Query: 597 HLGFQ-ENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAI 640
              F  E + ++++L+ MY  C S                  W+++IS Y  H +  +A+
Sbjct: 594 ERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAV 653

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           ELFH M   G+ P   + + +LS CSH GL+DEG+  Y +M+E   + P  +++ C++D+
Sbjct: 654 ELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVE-LGLEPTQDNYACVIDL 712

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+GKLQEA EFI++L  +P      ++LS+C  HGD + G++ AE + +++P +   +
Sbjct: 713 LGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAH 772

Query: 761 ISLSNMYVA 769
           + LS++Y A
Sbjct: 773 VVLSSIYSA 781



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 175/713 (24%), Positives = 321/713 (45%), Gaps = 81/713 (11%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++ A  ++  L   R +H   ++A +     L N  ++ Y KC  L+ +  TF  M   +
Sbjct: 1   LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
             +W  I+  C  ++     ++  R+M   G + DN++L +A                  
Sbjct: 61  VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAA------------------ 102

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
                              ++MY  CG ++ A+R F  M  ++V++W A+I   A+    
Sbjct: 103 -------------------LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVT-SL 142

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           E+AF +   M+L    + +  T VTL+  C+    L  G  +H  ++      +  + N+
Sbjct: 143 EQAFKVFRLMEL-EGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNA 201

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+  Y +   L  A  +F+++    D+++WN++I+             L++ ML    + 
Sbjct: 202 LITMYGRCGRLEDARAIFSSMVE-RDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 260

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T +A+L   N PE+L   K +H   ++ G S N     AL+ MY  C  L     L 
Sbjct: 261 DKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 320

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLE 485
           +++   +  S WN+++ A  ++G  ++A++  + M Q     PD+VT V +++ C G+ +
Sbjct: 321 EKMPQRNVIS-WNVMVTAYAKHGLGRKAVQITEYM-QLDGVKPDNVTCVGLLNVCTGSAD 378

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L   G+ +HG   +     D  + N+L+ MYGRC +++ A  VF+     N+ +W  M++
Sbjct: 379 LKL-GRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLT 437

Query: 546 AFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A+S+   +  AL LF  +     +P  I+ +  L AC     L  G+ +H      G   
Sbjct: 438 AYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDI 497

Query: 603 NSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           +  + SAL+ MY  C                K++  WS+MI+A+  HG+  E ++    M
Sbjct: 498 DVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFM 557

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSG 705
              G+  + ++  S LSACS+   + EG + ++ + E  +D    T  +  +V M G+ G
Sbjct: 558 QQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTN-SLVTMYGKCG 616

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
            L  A E  +    Q     W A++S  + H  T   +   EL  +++ E V 
Sbjct: 617 SLDCAREVFETSRRQDTI-CWNAIISGYAQHSQT---RDAVELFHRMQQEGVA 665



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 257/539 (47%), Gaps = 22/539 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P   +L+T Y      E + A+F     +D++ WNA+IT   ++  V   +  +  M++E
Sbjct: 197 PLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQE 256

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + D  T + +++       L + ++VH   +++G+  + +L    V MY+KC  L  +
Sbjct: 257 GCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDT 316

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   + +SWN +++    +    K +     M   G + DNV+    +      
Sbjct: 317 RWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGS 376

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +L  G+ +H   I  G  ++  + + NSL++MY +CG++E AE  F G+  ++V+SW A
Sbjct: 377 ADLKLGRKVHGW-IAEGRCEADLI-LWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTA 434

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  ++   + + A  L H + L   V+P   T +  +  C  +  L +GR VH  A++ 
Sbjct: 435 MLTAYSRQNRQDMALLLFHAIHL-SGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQS 493

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKE 358
               D+ + ++L+  Y +  S+  A+  F+      + V+W++MI+            + 
Sbjct: 494 GNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQH 553

Query: 359 MLYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYI 414
           + ++  Q    S +T  + L +C++   L  GK IH +  +  F      V N+L+ MY 
Sbjct: 554 LRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYG 613

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  + +  S   DT CWN +I    Q+   ++A++ F  M QQ+  +PD VT 
Sbjct: 614 KCGSLDCAREVFE-TSRRQDTICWNAIISGYAQHSQTRDAVELFHRM-QQEGVAPDPVTF 671

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
           V ++S C +  L  EG  ++  A    +GL+    N   +I + GR   ++ A    +S
Sbjct: 672 VCILSVCSHGGLLDEG--VYAYASMVELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQS 728



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 219/494 (44%), Gaps = 19/494 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++   T+L+  YS     E +  LF +   ++V++WN M+TA  ++      +   
Sbjct: 292 GVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQIT 351

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G++ D+ T + +++  T    LK GR VH    +    AD  L N  +NMY +C
Sbjct: 352 EYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRC 411

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +E  F G+   + +SW  +++     N  +  LL F  +  SG +   ++   A+
Sbjct: 412 GEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEAL 471

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
            A      L  G+++H+  ++ G +    VS+ ++L++MY +CG I  A+  F      K
Sbjct: 472 DACVGAEALDKGRLVHSCAVQSGNDID--VSLGSALVAMYGRCGSIRDAKACFDDTEVRK 529

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + V+W+A+I  F  +G+  E    L  MQ  + ++   AT  + +S C++   LREG+ +
Sbjct: 530 NHVTWSAMIAAFVQHGQDREGLQHLRFMQ-QQGLDMSPATFASTLSACSNLADLREGKRI 588

Query: 301 HGYAI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H Y   RR       + NSL+  Y K  SL  A  +F   +   D + WN++ISG     
Sbjct: 589 HSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFET-SRRQDTICWNAIISGYAQHS 647

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF  M          T + IL  C+    L+ G   +   ++LG         
Sbjct: 648 QTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYA 707

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQN 466
            ++ +    G L  A   +Q +           ++ +C  +G  Q   +  +  M     
Sbjct: 708 CVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPR 767

Query: 467 ASPDSVTLVNVISA 480
           +S   V L ++ SA
Sbjct: 768 SSSAHVVLSSIYSA 781



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 132/307 (42%), Gaps = 34/307 (11%)

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYN 534
           ++ AC  ++     + LH   +++   LD RV   N LI  YG+C  +  A   FE    
Sbjct: 1   LLQACPKVKALDVARRLHSQIVRA--SLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSY 58

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            N+ TW  +I   +Q+     A+ L R +  E   P+ I++++ L+     G +   K++
Sbjct: 59  KNVYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRV 118

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
              +                      ++   W++MI A+       +A ++F  M   G 
Sbjct: 119 FDAM--------------------PARNVITWTAMIGAHAVTSLE-QAFKVFRLMELEGF 157

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +    + ++L+ ACS    ++ G+  +   +E      ET     ++ M GR G+L++A 
Sbjct: 158 KSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAM-ETPLCNALITMYGRCGRLEDAR 216

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYY--ISLSNMY 767
               ++ ++     W A+++    HG  +    + +L+ +   +P+ V +   +++SN  
Sbjct: 217 AIFSSM-VERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGP 275

Query: 768 VALGRWK 774
            AL   K
Sbjct: 276 EALTEVK 282


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 219/725 (30%), Positives = 373/725 (51%), Gaps = 45/725 (6%)

Query: 93  RVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFS--GMHCADTVSWNTIMSGC 149
           R  H  S+ +G +A S  L    +  YA   DL S+        +       WN++    
Sbjct: 33  RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRAL 92

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL--SYGKVIHALGIKLGYED 207
              + P + L  +  M  S  + D+ +   A+ A+A         G  +HA  ++ G+  
Sbjct: 93  SSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLA 152

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +    N+L++ Y+ CG    A R F  M  +DVVSWN+++  F +NG F +A   L  
Sbjct: 153 DVFTG--NTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRAL-- 208

Query: 268 MQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           + +MRS  P ++A++V+++  C      + G S+H  A++  L   + + N+L+D Y K 
Sbjct: 209 VSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKF 268

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAI 374
             +  +  +F+ +   N+ VSWNS I     +G + ++L +  + S         TL ++
Sbjct: 269 GDVEASMQVFDGMLEQNE-VSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSL 327

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           LP+     S + G+ +H + +K     +    N+L+ MY   G L  A ++ +++  + +
Sbjct: 328 LPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMK-DRN 386

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I    QNG   EA +    M Q+    P+S+TLVNV+ AC  +     GK +H
Sbjct: 387 VVSWNAMIANLVQNGAETEAFRLVTDM-QKSGECPNSITLVNVLPACARMASLKMGKQIH 445

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
             +++  +  D  + NALI MY +C  +  A  +FE     ++ ++N +I  +SQ+    
Sbjct: 446 AWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQSPWCF 504

Query: 555 RALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            +L LF+ +     + + +S +  LSACT L V +HGK+IH  +       + F+S++LL
Sbjct: 505 ESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLL 564

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           D+Y+                 K  A+W++MI  YG HG+   A ELF  M   G+     
Sbjct: 565 DLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHV 624

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           S I++L+ACSH GLVD+G +Y++ M+ + ++ P+  H+ C+VD+LGR+G+L +  E I++
Sbjct: 625 SYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRD 683

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P      VWGA+L AC  HG+ ++ +  AE LF+L+PE+ GYY  + NMY   GRW +A
Sbjct: 684 MPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEA 743

Query: 777 VEIGK 781
            +I K
Sbjct: 744 NKIRK 748



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 202/742 (27%), Positives = 347/742 (46%), Gaps = 54/742 (7%)

Query: 7   LPTSTSLLTAYSNVSYFESS-LALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEM 64
           LP + +LL +Y+ +S   S+ L L +     +    WN++  A          L  +  M
Sbjct: 49  LPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLM 108

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCL--KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +   +R D  T    + A          +G  +H  +++ G +AD    N  V  YA CG
Sbjct: 109 LRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACG 168

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  M   D VSWN+++S  L N            M  SG   +  SL S V 
Sbjct: 169 KACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVP 228

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A     E  +G  IHAL +K+G   +  V++ N+L+ MY + GD+EA+ + F GM  ++ 
Sbjct: 229 ACGTEQEEKFGLSIHALAVKVGL--NTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNE 286

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN+ I  F   G + +   +  +M    +V P   T+ +L+    +      GR VHG
Sbjct: 287 VSWNSAIGCFLNAGFYGDVLRMFRKMS-EHNVMPGSITLSSLLPALVELGSFDLGREVHG 345

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK----- 357
           Y+I+R +  D+ + NSL+D Y+K  SL KA  +F  +   N +VSWN+MI+ L +     
Sbjct: 346 YSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRN-VVSWNAMIANLVQNGAET 404

Query: 358 EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           E   L +    S       TL+ +LP+C    SL+ GK IH W ++ G   +    NAL+
Sbjct: 405 EAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALI 464

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG L  A ++ +R S   D S +N +I+  +Q+    E++  FK M +      D
Sbjct: 465 DMYSKCGQLSLARNIFER-SEKDDVS-YNTLILGYSQSPWCFESLLLFKQM-RSVGIDYD 521

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +V+ +  +SAC NL +   GK +H + ++ L+     + N+L+ +Y +   + +AS +F 
Sbjct: 522 AVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFN 581

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
                ++ +WN MI  +  +     A ELF  ++    + + +S +++L+AC+  G++  
Sbjct: 582 KITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDK 641

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           GK+    +     +           M+  C        M+   G  G+  +  E+  +M 
Sbjct: 642 GKKYFSQMVAQNIEPQQ--------MHYAC--------MVDLLGRAGQLSKCAEIIRDMP 685

Query: 648 NSGIRPTKSSVI-SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSG 705
                P  S V  +LL AC   G + E  Q+    L  ++++PE + ++  +++M   +G
Sbjct: 686 ----FPANSDVWGALLGACRIHGNI-ELAQWAAEHL--FELKPEHSGYYTLMINMYAETG 738

Query: 706 KLQEA---YEFIKNLPIQPKPG 724
           +  EA    + +K+  +Q  P 
Sbjct: 739 RWNEANKIRKLMKSRKVQKNPA 760



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 268/560 (47%), Gaps = 22/560 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG LA + T  +L+  Y+       +  +F E   +DVV+WN++++A + N         
Sbjct: 148 RGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRA 207

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M+  G   +  +L+ +V A       K G  +H L++K G+    +L N  V+MY K
Sbjct: 208 LVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGK 267

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD+ +S   F GM   + VSWN+ +   L+  +    L  FR+M        +++LSS 
Sbjct: 268 FGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSL 327

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LG    G+ +H   IK   +   +V+  NSL+ MY++ G +E A   F  M  +
Sbjct: 328 LPALVELGSFDLGREVHGYSIKRAMDLDIFVA--NSLVDMYAKFGSLEKASTIFEQMKDR 385

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRS 299
           +VVSWNA+I     NG   EAF L+ +MQ  +S E P+  T+V ++  CA    L+ G+ 
Sbjct: 386 NVVSWNAMIANLVQNGAETEAFRLVTDMQ--KSGECPNSITLVNVLPACARMASLKMGKQ 443

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H ++IRR L +DL + N+L+D YSK   LS A  +F       D VS+N++I G     
Sbjct: 444 IHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFE--RSEKDDVSYNTLILGYSQSP 501

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LFK+M  +   +   + +  L +C +    + GK IHC  ++   S +    N
Sbjct: 502 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 561

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ +Y   G LV A  +  +I+   D + WN +I+    +G    A + F+ M +    
Sbjct: 562 SLLDLYTKGGMLVTASKIFNKIT-KKDVASWNTMILGYGMHGQIDIAFELFELM-KGDGL 619

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI-KSAS 526
             D V+ + V++AC +  L  +GK      +   +         ++ + GR   + K A 
Sbjct: 620 DYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAE 679

Query: 527 TVFESCYNCNLCTWNCMISA 546
            + +  +  N   W  ++ A
Sbjct: 680 IIRDMPFPANSDVWGALLGA 699


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 328/602 (54%), Gaps = 42/602 (6%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
              L S+Y++C  ++AA + F      +V  WN+ +  +    ++EE   L H M     
Sbjct: 39  ATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAG 98

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKA 332
             PD  T+   +  CA   +L  G+ +HG+A +   +G D+ + ++L++ YSK   + +A
Sbjct: 99  EAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEA 158

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL-CSQFSFSTLLAILPSCN 379
             +F       D V W SM++G            LF +M+ + C      TL++++ +C 
Sbjct: 159 LKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACA 217

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
              +++ G  +H   ++  F  +   VN+L+++Y   G    A +L  ++    D   W+
Sbjct: 218 QLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK-DVISWS 276

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSLHGL 496
            +I     N    EA+  F  M +++   P+SVT+V+ + AC    NLE   EGK +H +
Sbjct: 277 TMIACYANNEAANEALNLFHEMIEKR-FEPNSVTVVSALQACAVSRNLE---EGKKIHKI 332

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           A+     LD  V  ALI MY +C     A  +F+     ++ +W  ++S ++QN    ++
Sbjct: 333 AVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKS 392

Query: 557 LELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           + +FR++     +P+ +++V IL+A ++LG+ +    +HG+V   GF  N F+ ++L+++
Sbjct: 393 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 452

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC-NSGIRPTKSS 657
           YS C               +    WSSMI+AYG HG+G EA+E+F +M  NS +RP   +
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+LSACSH+GLV+EGL+ ++ M+ +Y +RP++EH   +VD+LGR G+L +A + I  +
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRM 572

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           PI   P VWGA+L AC  H + +MG+  A+ LF L+P + GYYI LSN+Y   G+W +  
Sbjct: 573 PIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVA 632

Query: 778 EI 779
           E+
Sbjct: 633 EL 634



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 223/412 (54%), Gaps = 20/412 (4%)

Query: 388  KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            K  H      G   ++  +     MY++   + AA  + + I  N  +  WN++I     
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIP-NPCSFLWNVMIRGFAT 795

Query: 448  NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            +G F  +++ +  M  ++   PD       + +C  L     GK +H   +      D  
Sbjct: 796  DGRFLSSLELYSKM-MEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLF 854

Query: 508  VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL---ELFRHLE 564
            V  AL+ MY +C DI++A  VF+     +L +W  MIS ++ N      L   +L R   
Sbjct: 855  VDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG 914

Query: 565  FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
              PN +SI+S+L AC  LG LR G+  H +V   GF+ +  +++A++DMYS C       
Sbjct: 915  VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974

Query: 618  --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                    K    WS+MI++YG HG G +AI+LF +M  +G+RP+  +   +LSACSHSG
Sbjct: 975  CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 670  LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
            L++EG  Y+  M EE+ +  +  ++ C+VD+LGR+G+L EA + I+N+P++P   +WG++
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094

Query: 730  LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            L AC  H +  + +++A+ LF L+P + GY++ LSN+Y A  RW +  ++ K
Sbjct: 1095 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRK 1146



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 201/815 (24%), Positives = 358/815 (43%), Gaps = 72/815 (8%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            R F   LP   SLL  Y+     + +  LF +   KDV++W+ MI     N      L+ 
Sbjct: 235  REFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNL 294

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            F EM+E+    +S T++  + A      L++G+ +H +++  G   D S+    ++MY K
Sbjct: 295  FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMK 354

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            C   + +   F  +   D VSW  ++SG   N    K +  FR M   G Q D V++   
Sbjct: 355  CSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKI 414

Query: 181  VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +AAS+ LG       +H   ++ G+  + +V    SLI +YS+CG +  A + F GM  +
Sbjct: 415  LAASSELGIFQQALCLHGYVVRSGFNSNVFVGA--SLIELYSKCGSLGDAVKLFKGMIVR 472

Query: 241  DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--- 297
            DVV W+++I  + ++G+  EA ++  +M    +V P+  T ++++S C+ + L+ EG   
Sbjct: 473  DVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKI 532

Query: 298  --RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--- 352
              R VH Y +R     D      ++D   +   L KA  + N +        W +++   
Sbjct: 533  FDRMVHDYQLRP----DSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGAC 588

Query: 353  ---------SGLFKEMLYL-CSQFSFSTLLAILPSCNSP--ESLEFGKSIHCWQLKLGFS 400
                         K + +L  S   +  LL+ + + +       E    I    LK  F 
Sbjct: 589  RIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFG 648

Query: 401  NNTIGVNALMHMYINCG----DLVAAFSLLQRISHNSDTSCW----NIVIVACTQNGHFQ 452
             + + V   +H ++       D    + LL+++        +    + ++        F 
Sbjct: 649  QSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFW 708

Query: 453  EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
            + IK  +S  +   ++P + T    IS    L      K  H       +  D+R+    
Sbjct: 709  QRIKATESKYKTIGSAPGTDT----ISCFSCL------KKTHAKIFAYGLQYDSRILTKF 758

Query: 513  ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
              MY     I +AS VFE   N     WN MI  F+ +   + +LEL+  +     +P++
Sbjct: 759  AIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDK 818

Query: 570  ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
             +    L +C  L  L+ GK IH H+   G   + F+ +AL+DMY+ C            
Sbjct: 819  FAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDK 878

Query: 618  ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               +   +W+SMIS Y ++G   E +  F  M +SG+ P + S++S+L AC + G + +G
Sbjct: 879  MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938

Query: 675  LQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
              +++ +++   E+D+   T     I+DM  + G L  A         +     W AM++
Sbjct: 939  EWFHSYVIQTGFEFDILVAT----AIMDMYSKCGSLDLARCLFDETAGKDLV-CWSAMIA 993

Query: 732  ACSHHGDTKMGKQVAELLFK--LEPENVGYYISLS 764
            +   HG  +    + + + K  + P +V +   LS
Sbjct: 994  SYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 1028



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 253/520 (48%), Gaps = 21/520 (4%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN-TIMSGCLHNN 153
           +H    K G++ D+       ++YAKC  L ++   F      +   WN T+ S C    
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           + E   L+   +  +GE  DN ++  A+ A A L  L  GKVIH    K   E    + V
Sbjct: 83  WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA-KKNDEIGSDMFV 141

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            ++L+ +YS+CG +  A + F      D V W +++ G+  N   EEA  L  +M +M  
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  D  T+V+++S CA  L ++ G  VHG  IRR    DL ++NSL++ Y+K+     A 
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAA 261

Query: 334 LLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSP 381
            LF+ + P  D++SW++MI+             LF EM+    + +  T+++ L +C   
Sbjct: 262 NLFSKM-PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +LE GK IH   +  GF  +     AL+ MY+ C     A  L QR+    D   W  +
Sbjct: 321 RNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVAL 379

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +    QNG   +++  F++M       PD+V +V +++A   L +  +   LHG  ++S 
Sbjct: 380 LSGYAQNGMAYKSMGVFRNML-SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 438

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
              +  V  +LI +Y +C  +  A  +F+     ++  W+ MI+A+  +     ALE+F 
Sbjct: 439 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFD 498

Query: 562 HL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
            +       PN ++ +SILSAC+  G++  G +I   + H
Sbjct: 499 QMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVH 538



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 190/783 (24%), Positives = 337/783 (43%), Gaps = 79/783 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-E 67
             ++L+  YS       +L +F E    D V W +M+T   +N      L  F +MV  +
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +  D  TL+ +VSA  Q+  +K G  VH L I+     D  L N  +N+YAK G    +
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              FS M   D +SW+T+++   +N    + L  F EM     + ++V++ SA+ A A  
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  GK IH + +  G+E     SV+ +LI MY +C   + A   F  +  KDVVSW A
Sbjct: 321 RNLEEGKKIHKIAVWKGFELD--FSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVA 378

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++ G+A NG   ++  +   M L   ++PD   VV +++  ++  + ++   +HGY +R 
Sbjct: 379 LLSGYAQNGMAYKSMGVFRNM-LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS 437

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
               ++ +  SL++ YSK  SL  A  LF  +  + D+V W+SMI+     G   E L +
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI-VRDVVIWSSMIAAYGIHGRGGEALEI 496

Query: 363 CSQFSFS--------TLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTIGVNAL 409
             Q   +        T L+IL +C+    +E     F + +H +QL+    +  I V+ L
Sbjct: 497 FDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLL 556

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
             +    G L  A  ++ R+   +    W  ++ AC  + + +      K++     +  
Sbjct: 557 GRI----GQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHA 612

Query: 470 D-SVTLVNVISACGNLELAFEGKS-LHGLALKSLMGLD-TRVQNALITMYGRCRDIKSAS 526
              + L N+ +  G  +   E ++ +    LK + G     V+  + +     R    + 
Sbjct: 613 GYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQ 672

Query: 527 TVFE-----------SCYNCNLCTWNCMISAFSQNKAEVRALE-LFRHLEFEP--NEISI 572
            ++E             Y  +L        A  Q    ++A E  ++ +   P  + IS 
Sbjct: 673 KIYELLRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISC 732

Query: 573 VSILSACTQLGVLRHGKQIHGHVF------HLGFQENSFISSALLDMYSNCKSNAAWSSM 626
            S L   T   +  +G Q    +       ++ F      S    D+ + C  +  W+ M
Sbjct: 733 FSCLKK-THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPC--SFLWNVM 789

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I  +   G+   ++EL+ +M   G++P K +    L +C  +GL D  LQ    +     
Sbjct: 790 IRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSD--LQRGKVI----- 840

Query: 687 VRPETEHHVC------------IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
                +H VC            +VDM  + G ++ A      + ++     W +M+S  +
Sbjct: 841 ----HQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS-WTSMISGYA 895

Query: 735 HHG 737
           H+G
Sbjct: 896 HNG 898



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 164/343 (47%), Gaps = 4/343 (1%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            T     Y + +  +++  +F +  N     WN MI     +   +  L  + +M+E+G++
Sbjct: 756  TKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLK 815

Query: 71   FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             D       + +   ++ L++G+V+H   +  G   D  +    V+MYAKCGD+ ++   
Sbjct: 816  PDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLV 875

Query: 131  FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            F  M   D VSW +++SG  HN Y  + L +F  M  SG   + VS+ S + A   LG L
Sbjct: 876  FDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGAL 935

Query: 191  SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              G+  H+  I+ G+E    + V  +++ MYS+CG ++ A   F     KD+V W+A+I 
Sbjct: 936  RKGEWFHSYVIQTGFEFD--ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993

Query: 251  GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LL 309
             + ++G   +A DL  +M +   V P   T   ++S C+ S LL EG+          ++
Sbjct: 994  SYGIHGHGRKAIDLFDQM-VKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 1052

Query: 310  GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               L     ++D   ++  LS+A  L   +    D   W S++
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 177/387 (45%), Gaps = 28/387 (7%)

Query: 87   NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
            +CLK+    H      G+  DS +   F  MY     ++++   F  +    +  WN ++
Sbjct: 734  SCLKK---THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMI 790

Query: 147  SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
             G   +      L  + +M   G + D  +   A+ + A L +L  GKVIH   +  G  
Sbjct: 791  RGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850

Query: 207  DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            +  +V    +L+ MY++CGDIEAA   F  M  +D+VSW ++I G+A NG   E      
Sbjct: 851  NDLFVDA--ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFF- 907

Query: 267  EMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
               LMRS  V P+  ++++++  C +   LR+G   H Y I+    +D+L+  ++MD YS
Sbjct: 908  --DLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYS 965

Query: 325  KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
            K  SL  A  LF+  A   DLV W++MI+             LF +M+    + S  T  
Sbjct: 966  KCGSLDLARCLFDETAG-KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFT 1024

Query: 373  AILPSCNSPESLEFGKSIHCWQL---KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
             +L +C+    LE GK    +QL   +   +        ++ +    G L  A  L++ +
Sbjct: 1025 CVLSACSHSGLLEEGKMY--FQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082

Query: 430  SHNSDTSCWNIVIVACTQNGHFQEAIK 456
                D S W  ++ AC  + +   A K
Sbjct: 1083 PVEPDASIWGSLLGACRIHNNLDLAEK 1109



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 5/156 (3%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   +  +T+++  YS     + +  LF ET  KD+V W+AMI +   +      +  F
Sbjct: 949  GFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLF 1008

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV--FVNMYA 119
             +MV+ G+R    T   ++SA +    L++G++   L  +  +IA   L N    V++  
Sbjct: 1009 DQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIA-RKLSNYACMVDLLG 1067

Query: 120  KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            + G L+ +      M    D   W +++  C +HNN
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 1103



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 20/185 (10%)

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA--------- 622
           +V +  AC      R   Q+H  VF  G   ++F ++ L  +Y+ C S  A         
Sbjct: 7   LVDLFQACNNG---RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63

Query: 623 ------WSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                 W+S + +Y    +  E + LFH M C +G  P   ++   L AC+   +++ G 
Sbjct: 64  HPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGK 123

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
             +    +  ++  +      +V++  + G++ EA +  +    +P   +W +M++    
Sbjct: 124 VIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQ 182

Query: 736 HGDTK 740
           + D +
Sbjct: 183 NNDPE 187


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 204/660 (30%), Positives = 346/660 (52%), Gaps = 53/660 (8%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDI 227
           G + DN +  + + A A L ++  GK IHA   K GY  DS  V+V N+L+++Y +CGD 
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS--VTVANTLVNLYRKCGDF 62

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
            A  + F  ++ ++ VSWN++I       K+E A +    M L  +VEP   T+V++++ 
Sbjct: 63  GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCM-LDENVEPSSFTLVSVVTA 121

Query: 288 CADSLL---LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           C++  +   L  G+ VH Y +R+    +  ++N+L+  Y K   L+ +++L  +     D
Sbjct: 122 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG-RD 179

Query: 345 LVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           LV+WN+++S L             +EM+    +    T+ ++LP+C+  E L  GK +H 
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 393 WQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
           + LK G    N+   +AL+ MY NC  +++   +   +  +     WN +I   +QN H 
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHD 298

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
           +EA+  F  M +      +S T+  V+ AC         +++HG  +K  +  D  VQN 
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 358

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE------- 564
           L+ MY R   I  A  +F    + +L TWN MI+ +  ++    AL L   ++       
Sbjct: 359 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418

Query: 565 -------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
                   +PN I++++IL +C  L  L  GK+IH +        +  + SAL+DMY+ C
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 478

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K+   W+ +I AYG HG G EAI+L   M   G++P + + IS+ 
Sbjct: 479 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 538

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ-P 721
           +ACSHSG+VDEGL+ +  M  +Y V P ++H+ C+VD+LGR+G+++EAY+ +  +P    
Sbjct: 539 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 598

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           K G W ++L A   H + ++G+  A+ L +LEP    +Y+ L+N+Y + G W  A E+ +
Sbjct: 599 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 658



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 270/604 (44%), Gaps = 59/604 (9%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +  + +L+  Y     F +   +F     ++ V+WN++I++        M L  F  M++
Sbjct: 46  VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 105

Query: 67  EGIRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           E +   S TL+ +V+A   L     L  G+ VH   ++ G + +S + N  V MY K G 
Sbjct: 106 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGK 164

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L SS+         D V+WNT++S    N    + L Y REM   G + D  ++SS + A
Sbjct: 165 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 224

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + L  L  GK +HA  +K G  D     V ++L+ MY  C  + +  R F GM  + + 
Sbjct: 225 CSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WNA+I G++ N   +EA  L   M+    +  +  T+  ++  C  S       ++HG+
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 343

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            ++R L  D  + N+LMD YS+   +  A  +F  +    DLV+WN+MI+G         
Sbjct: 344 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHED 402

Query: 355 ---LFKEMLYLCSQFSFS-----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
              L  +M  L  + S             TL+ ILPSC +  +L  GK IH + +K   +
Sbjct: 403 ALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 462

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +    +AL+ MY  CG L  +  +  +I    +   WN++I+A   +G+ QEAI   + 
Sbjct: 463 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLR- 520

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEG---------------KSLHGLALKSLMGLD 505
           M   Q   P+ VT ++V +AC +  +  EG                S H   +  L+G  
Sbjct: 521 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 580

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLE 564
            R++ A   M    RD   A              W+ ++ A    N  E+  +     ++
Sbjct: 581 GRIKEAYQLMNMMPRDFNKAG------------AWSSLLGASRIHNNLEIGEIAAQNLIQ 628

Query: 565 FEPN 568
            EPN
Sbjct: 629 LEPN 632



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 174/712 (24%), Positives = 328/712 (46%), Gaps = 71/712 (9%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCG 122
           M+  GI+ D+     ++ A+  +  ++ G+ +H    K G   DS ++ N  VN+Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           D  +    F  +   + VSWN+++S        E  L  FR M     +  + +L S V 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 183 ASACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A + L     L  GK +HA G++ G  +S    + N+L++MY + G + +++        
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINTLVAMYGKLGKLASSKVLLGSFGG 177

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D+V+WN ++     N +  EA + L EM ++  VEPD  T+ +++  C+   +LR G+ 
Sbjct: 178 RDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEPDEFTISSVLPACSHLEMLRTGKE 236

Query: 300 VHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           +H YA++   L  +  + ++L+D Y     +     +F+ +     +  WN+MI+G    
Sbjct: 237 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD-RKIGLWNAMIAGYSQN 295

Query: 355 --------LFKEMLYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   LF  M       + ST +A ++P+C    +    ++IH + +K G   +   
Sbjct: 296 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 355

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N LM MY   G +  A  +  ++  + D   WN +I     + H ++A+     M   +
Sbjct: 356 QNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 414

Query: 466 NA----------SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
                        P+S+TL+ ++ +C  L    +GK +H  A+K+ +  D  V +AL+ M
Sbjct: 415 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 474

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  ++ +  VF+     N+ TWN +I A+  +     A++L R +  +   PNE++ 
Sbjct: 475 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 534

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           +S+ +AC+  G++  G +I    F++           +   Y    S+  ++ ++   G 
Sbjct: 535 ISVFAACSHSGMVDEGLRI----FYV-----------MKPDYGVEPSSDHYACVVDLLGR 579

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET- 691
            G+  EA +L + M     +    S  SLL A      ++ G     N+++   + P   
Sbjct: 580 AGRIKEAYQLMNMMPRDFNKAGAWS--SLLGASRIHNNLEIGEIAAQNLIQ---LEPNVA 634

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGVWGAMLSACS--HHGD 738
            H+V + ++   +G   +A E  +N+    ++ +PG        CS   HGD
Sbjct: 635 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG--------CSWIEHGD 678


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 231/791 (29%), Positives = 384/791 (48%), Gaps = 44/791 (5%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           +A L     L+ AYS     + S  +        VV WN+MI            L  FG 
Sbjct: 30  VAGLKPHNQLINAYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGY 89

Query: 64  MVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           M E +GI  D  T    + A       ++G  +H L  + G  +D  +    V MY K G
Sbjct: 90  MSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAG 149

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           DL S+   F  M   D V+WNT++SG   N    + L  FR+M  S    D+VSL + + 
Sbjct: 150 DLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIP 209

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A + L +    + +H L IK G+  +     ++ LI MY +C D+ AAE  F  +  KD 
Sbjct: 210 AVSKLEKNDVCRCLHGLVIKKGFTSA----FSSGLIDMYCKCADLYAAECVFEEVFSKDE 265

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSV 300
            SW  ++  +A NG FEE  +L     +MR+ +  +  V    +L A + +  L +G ++
Sbjct: 266 SSWGTMMAAYAHNGSFEEVLELF---DVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAI 322

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y +++ +  D+ +  SL++ YSK   L  AE LF  I    D+VSW++MI+       
Sbjct: 323 HEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKD-RDVVSWSAMIASFEQAGQ 381

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF++M+    + +  TL ++L  C    +   GKSIHC+ +K    +      A
Sbjct: 382 HDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATA 441

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ MY  CG         +R+    D   +N +    TQ G   +A   +K+M +     
Sbjct: 442 VISMYAKCGLFSPTLKAFERLPIK-DAIAFNALAQGYTQIGDASKAFDVYKNM-KLHGVC 499

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PDS T+V ++  C        G  ++G  +K     +  V +ALI M+ +C  + +A ++
Sbjct: 500 PDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSL 559

Query: 529 FESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           F+ C +  +  +WN M++ +  +     A+  FR ++   F+PN ++ V+I+ A  +L  
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAA 619

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L  G  +H  +   GF  ++ + ++L+DMY+ C               K+  +W++M+SA
Sbjct: 620 LSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVSWNTMLSA 679

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           Y  HG    A+ LF  M  + ++P   S +S+LSAC H+GL +EG + +  M E + +  
Sbjct: 680 YAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEMEERHKIEA 739

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
           + EH+ C+VD+LG+SG   EA E ++ + ++   GVWGA+L++   H +  +       L
Sbjct: 740 KVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLNSSRMHCNLWLSNAALCQL 799

Query: 750 FKLEPENVGYY 760
            KLEP N  +Y
Sbjct: 800 VKLEPLNPSHY 810



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 180/606 (29%), Positives = 304/606 (50%), Gaps = 24/606 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +   T+L+  Y       S+  +F +   KD+VTWN M++   +N C    L  F
Sbjct: 130 GFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLF 189

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    +  D  +L  ++ A++++      R +H L IK G    S+  +  ++MY KC
Sbjct: 190 RDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFT--SAFSSGLIDMYCKC 247

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL ++EC F  +   D  SW T+M+   HN   E+ L  F  M     + + V+ +SA+
Sbjct: 248 ADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASAL 307

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A+A +G L  G  IH   ++ G      +SV  SLI+MYS+CG++E AE+ F  +  +D
Sbjct: 308 QAAAYVGNLEKGIAIHEYTVQQGMMSD--ISVATSLINMYSKCGELELAEQLFIKIKDRD 365

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSV 300
           VVSW+A+I  F   G+ +EA  L  +M  MR+  +P+  T+ +++  CA     R G+S+
Sbjct: 366 VVSWSAMIASFEQAGQHDEALSLFRDM--MRTHFKPNAVTLTSVLQGCAGVAASRLGKSI 423

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H YAI+  +  +L    +++  Y+K    S     F  + P+ D +++N++  G      
Sbjct: 424 HCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERL-PIKDAIAFNALAQGYTQIGD 482

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 ++K M          T++ +L +C        G  ++   +K GF +     +A
Sbjct: 483 ASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHA 542

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ M+  C  L AA SL  +      T  WNI++     +G  +EAI TF+ M + +   
Sbjct: 543 LIDMFTKCDALAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQM-KVEKFQ 601

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P++VT VN++ A   L     G S+H   ++      T V N+L+ MY +C  I+S+   
Sbjct: 602 PNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKC 661

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           F    N N+ +WN M+SA++ +     A+ LF  +   E +P+ +S +S+LSAC   G+ 
Sbjct: 662 FIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLA 721

Query: 586 RHGKQI 591
             GK+I
Sbjct: 722 EEGKRI 727



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 189/389 (48%), Gaps = 12/389 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G ++ +  +TSL+  YS     E +  LF +  ++DVV+W+AMI +  +       L  
Sbjct: 329 QGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSL 388

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+    + ++ TL  ++     +   + G+ +HC +IKA + ++       ++MYAK
Sbjct: 389 FRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAK 448

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG  + +   F  +   D +++N +  G        K    ++ M   G   D+ ++   
Sbjct: 449 CGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGM 508

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC- 239
           +   A   + + G  ++   IK G++   +V+  ++LI M+++C  + AA+  F    C 
Sbjct: 509 LQTCALCSDYARGSCVYGQIIKHGFDSECHVA--HALIDMFTKCDALAAAKSLF--DKCG 564

Query: 240 --KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K  VSWN +++G+ L+G+ EEA     +M++ +  +P+  T V ++   A+   L  G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEK-FQPNAVTFVNIVRAAAELAALSLG 623

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
            SVH   I+        + NSL+D Y+K   +  ++  F  I   N +VSWN+M+S    
Sbjct: 624 MSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKN-MVSWNTMLSAYAA 682

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEF 386
             L  C   + S  L++  +   P+S+ F
Sbjct: 683 HGLANC---AVSLFLSMQENELKPDSVSF 708



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 118/295 (40%), Gaps = 52/295 (17%)

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL+ ++  C N  L  +   +HG    SL+    +  N LI  Y   +    +  + +S 
Sbjct: 7   TLLRMLRECKNFRLLLQ---IHG----SLIVAGLKPHNQLINAYSLFQRPDLSRKIVDSV 59

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHG 588
               +  WN MI  +++      ALE+F ++      +P++ +    L AC        G
Sbjct: 60  PYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEG 119

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
            +IH  +  +GF+ + +I +AL++MY                  K    W++M+S    +
Sbjct: 120 LRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQN 179

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSA-----------CSHSGLVDEGLQYYNNML 682
           G   EA+ LF +M +S +     S+ +L+ A           C H  ++ +G        
Sbjct: 180 GCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFT------ 233

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                   +     ++DM  +   L  A E +           WG M++A +H+G
Sbjct: 234 --------SAFSSGLIDMYCKCADLYAA-ECVFEEVFSKDESSWGTMMAAYAHNG 279


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 317/619 (51%), Gaps = 36/619 (5%)

Query: 194 KVIHALGIKLGYEDSPYVS-VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           K IHA  I LG   SPY   + +SL + Y+ CG    A + F  +    + SWNA+I  +
Sbjct: 38  KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMY 97

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G   +A  L  +M       PD  T   +I  C D LL   G  +H   +      D
Sbjct: 98  TNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSD 157

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE------------ML 360
             + NSLM  Y     +  A  +F+ +     LVSWN+MI+G FK             M+
Sbjct: 158 AFVQNSLMAMYMNCGEMEVARRVFDLMRE-RTLVSWNTMINGYFKNGCVKEALMVFDWMI 216

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               +   +T++++LP C+  + LE G+ +H          +    N+L+ MY  CG++ 
Sbjct: 217 GKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +    D   W  ++     NG  + A+     M Q ++  P+ VTL +V+SA
Sbjct: 277 EAQMIFYEMD-KRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSA 334

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +L     G+ LHG A++  +  +  V+ ALI MY +C ++  +  VF          W
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPW 394

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +IS    N    +A+ELF+ +  E   PN+ ++ S+L A   L  L+  + +HG++  
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454

Query: 598 LGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAI 640
            GF     +++ L+D+YS C                 K    WS++I+ YG HG G  AI
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF +M  SG++P + +  S+L ACSH+GLVDEGL  +  MLE+  +   T+H+ C++D+
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDL 574

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G+L+EAYE I+ +  +P   VWGA+L +C  H + ++G+  A+ LF+LEP N G Y
Sbjct: 575 LGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNY 634

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + L+N+Y A+GRW+DA  +
Sbjct: 635 VLLANIYSAVGRWRDAEHV 653



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 305/617 (49%), Gaps = 37/617 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL  AY+       +  LF E  N  + +WNAMI     +      L  F +M+  G R
Sbjct: 60  SSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119

Query: 71  F-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D+ T   ++ A       + G ++H  ++ +G  +D+ + N  + MY  CG++  +  
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M     VSWNT+++G   N   ++ L+ F  M   G + D  ++ S +   + L E
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239

Query: 190 LSYGKVIHAL-GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           L  G+ +HAL  +K   ED   +SV NSL+ MY++CG+++ A+  F+ M  +DVVSW  +
Sbjct: 240 LEVGRRVHALVEVKNLGED---ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTM 296

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           ++G+ LNG    A  LL +M    SV+P+  T+ +++S CA    L+ GR +HG+AIR+ 
Sbjct: 297 MNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQK 355

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  ++++  +L+D Y+K N+++ +  +F+  +       WN++ISG            LF
Sbjct: 356 LESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRT-APWNAIISGCIHNGLSRKAIELF 414

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K+ML      + +TL ++LP+      L+  +++H + ++ GF +       L+ +Y  C
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474

Query: 417 GDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           G L +A ++   I   + D   W+ +I     +GH + AI  F  M  Q    P+ +T  
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV-QSGVKPNEITFT 533

Query: 476 NVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFES-CY 533
           +++ AC +  L  EG  L    L+ + M L T     +I + GR   ++ A  +  +  +
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAF 593

Query: 534 NCNLCTWNCMISA--FSQNK--AEVRALELFRHLEFEP----NEISIVSILSACTQLGVL 585
             N   W  ++ +    +N    EV A  LF   E EP    N + + +I SA   +G  
Sbjct: 594 RPNHAVWGALLGSCVIHENVELGEVAAKWLF---ELEPGNTGNYVLLANIYSA---VGRW 647

Query: 586 RHGKQIHGHVFHLGFQE 602
           R  + +   + ++G ++
Sbjct: 648 RDAEHVRLMMNNIGLRK 664



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 242/498 (48%), Gaps = 20/498 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      SL+  Y N    E +  +F     + +V+WN MI    +N CV   L  F
Sbjct: 153 GFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVF 212

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ +GI  D  T++ ++   + +  L+ GR VH L     +  D S+ N  ++MYAKC
Sbjct: 213 DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+++ ++  F  M   D VSW T+M+G + N      LL  + M +   + + V+L+S +
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  L +G+ +H   I+   E    V V  +LI MY++C ++  + R F   + + 
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESE--VIVETALIDMYAKCNNVNLSFRVFSKXSKQR 390

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
              WNAII G   NG   +A +L  +M LM +V+P+ AT+ +L+   A    L++ R++H
Sbjct: 391 TAPWNAIISGCIHNGLSRKAIELFKQM-LMEAVDPNDATLNSLLPAYAFLTDLQQARNMH 449

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------ 354
           GY IR      + +   L+D YSK  SL  A  +FN I   + D+++W+++I+G      
Sbjct: 450 GYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGH 509

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVN 407
                 LF +M+    + +  T  +IL +C+    ++ G  +  + L+    S  T    
Sbjct: 510 GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQ 465
            ++ +    G L  A+ L++ ++   + + W  ++ +C   +N    E    +    +  
Sbjct: 570 CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629

Query: 466 NASPDSVTLVNVISACGN 483
           N   + V L N+ SA G 
Sbjct: 630 NTG-NYVLLANIYSAVGR 646



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 182/410 (44%), Gaps = 35/410 (8%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---VNALMHMYINCGDLVAAFSLLQRI 429
           ++L  C S +S+   K IH   + LG  ++      +++L   Y  CG    A  L   +
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
             N     WN +I   T +G   +A+  F  M       PD+ T   VI ACG+  L   
Sbjct: 83  -RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G  +H   + S    D  VQN+L+ MY  C +++ A  VF+      L +WN MI+ + +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201

Query: 550 NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N     AL +F  +     EP+  ++VS+L  C+ L  L  G+++H  V      E+  +
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            ++LLDMY+ C               +   +W++M++ Y  +G    A+ L   M    +
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV 321

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKL 707
           +P   ++ S+LSAC+    +  G       L  + +R + E  V +    +DM  +   +
Sbjct: 322 KPNFVTLASVLSACASLYSLKHG-----RCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
             ++        Q +   W A++S C H+G   + ++  EL  ++  E V
Sbjct: 377 NLSFRVFSKXSKQ-RTAPWNAIISGCIHNG---LSRKAIELFKQMLMEAV 422


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 184/592 (31%), Positives = 311/592 (52%), Gaps = 39/592 (6%)

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           + G +  A + F  M  +D +SW  II G+       EA  L  +M +   +  D   + 
Sbjct: 13  KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
             +  C  ++ +  G S+HGY+++      + + ++L+D Y K   + +  ++F  + P+
Sbjct: 73  LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEM-PL 131

Query: 343 NDLVSWNSMISGLF-----KEMLYL----------CSQFSFSTLLAILPSCNSPESLEFG 387
            ++VSW ++I+GL      KE L            C  ++FS+    L +C    +L +G
Sbjct: 132 RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSS---ALKACADSGALNYG 188

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           + IHC  LK GF+  +   N L  MY  CG L     L + ++   D   W  +I++  Q
Sbjct: 189 REIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQR-DVVSWTTIIMSNVQ 247

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            G  + A+K F+ M ++ + SP+  T   VIS C  L     G+ LH   ++  +     
Sbjct: 248 IGQEENAVKAFRRM-RETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS 306

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           V N+++ MY +C  +  ASTVF+     ++ +W+ MIS ++Q      A +    +  E 
Sbjct: 307 VANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREG 366

Query: 567 --PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---- 620
             PNE +  S+LS C  + +L  GKQ+H HV  +G ++N+ + SAL++MYS C S     
Sbjct: 367 PRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEAS 426

Query: 621 -----------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                       +W++MI+ Y  HG   EAI+LF ++   G+RP   + I++L+ACSH+G
Sbjct: 427 KIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAG 486

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVD G  Y+N++ + + + P  +H+ C++D+L R+G+L +A   I+++P Q    VW  +
Sbjct: 487 LVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTL 546

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L AC  HGD   GK+ AE + +L+P     +I+L+NMY A G+WK+A E+ K
Sbjct: 547 LRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRK 598



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 167/637 (26%), Positives = 292/637 (45%), Gaps = 55/637 (8%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW--SG 169
           N+ +    K G LN++   F  M   D +SW TI+SG ++     + L  F +M W   G
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKM-WVEPG 63

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
              D   LS A+ A      +S+G+ +H   +K  + +S +V   ++L+ MY + G ++ 
Sbjct: 64  LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVG--SALVDMYMKIGKVDE 121

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
               F  M  ++VVSW AII G    G  +EA     +M + + V  D  T  + +  CA
Sbjct: 122 GCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQK-VGCDTYTFSSALKACA 180

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           DS  L  GR +H   +++       + N+L   Y+K   L     LF ++    D+VSW 
Sbjct: 181 DSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMT-QRDVVSWT 239

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++I               F+ M       +  T  A++  C +   +E+G+ +H   ++ 
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  ++    N++M MY  C  L  A ++ Q +S   D   W+ +I    Q G  +EA   
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR-DIISWSTMISGYAQGGCGEEAFD- 357

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           + S  +++   P+     +V+S CGN+ +  +GK LH   L   +  +T VQ+ALI MY 
Sbjct: 358 YLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYS 417

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVS 574
           +C  IK AS +F+     N+ +W  MI+ ++++     A++LF+ L      P+ ++ ++
Sbjct: 418 KCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIA 477

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L+AC+  G++  G       FH          ++L  ++  C S   +  MI      G
Sbjct: 478 VLAACSHAGLVDLG-------FHY--------FNSLSKVHQICPSKDHYGCMIDLLCRAG 522

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE- 690
           +  +A  +   M      P +   +   +LL AC   G VD G +    +L+   + P  
Sbjct: 523 RLNDAESMIQSM------PFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ---LDPNC 573

Query: 691 TEHHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPG 724
              H+ + +M    GK +EA E    +K+  +  +PG
Sbjct: 574 AVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPG 610



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 238/486 (48%), Gaps = 28/486 (5%)

Query: 22  YFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIV 80
           +  ++  LF +   +D ++W  +I+  V        L  F +M VE G+  D   L + +
Sbjct: 16  HLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLAL 75

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
            A      +  G  +H  S+K   +    + +  V+MY K G ++     F  M   + V
Sbjct: 76  KACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVV 135

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW  I++G +   Y ++ L YF +M       D  + SSA+ A A  G L+YG+ IH   
Sbjct: 136 SWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQT 195

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K G+    +V+  N+L +MY++CG ++   R F  MT +DVVSW  II      G+ E 
Sbjct: 196 LKKGFTAVSFVA--NTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEEN 253

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A      M+    V P+  T   +IS CA    +  G  +H + IRR L   L + NS+M
Sbjct: 254 AVKAFRRMR-ETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEMLYL------CSQ 365
             YSK   L  A  +F  ++   D++SW++MISG          F  + ++       ++
Sbjct: 313 AMYSKCWQLDLASTVFQGLS-RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNE 371

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           F+F+++L++   C +   LE GK +H   L +G   NT+  +AL++MY  CG +  A  +
Sbjct: 372 FAFASVLSV---CGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKI 428

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---G 482
                +N+  S W  +I    ++G+ QEAI  FK +  +    PDSVT + V++AC   G
Sbjct: 429 FDEAEYNNIVS-WTAMINGYAEHGYSQEAIDLFKKLP-KVGLRPDSVTFIAVLAACSHAG 486

Query: 483 NLELAF 488
            ++L F
Sbjct: 487 LVDLGF 492



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 247/511 (48%), Gaps = 30/511 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+  +   ++L+  Y  +   +    +F E   ++VV+W A+I   V        L +F 
Sbjct: 99  FVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFS 158

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M  + +  D+ T    + A      L  GR +HC ++K G  A S + N    MY KCG
Sbjct: 159 DMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCG 218

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+     F  M   D VSW TI+   +     E  +  FR M  +    +  + ++ ++
Sbjct: 219 KLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVIS 278

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
             A LG + +G+ +HA  I+ G  DS  +SV NS+++MYS+C  ++ A   F G++ +D+
Sbjct: 279 GCATLGRIEWGEQLHAHVIRRGLVDS--LSVANSIMAMYSKCWQLDLASTVFQGLSRRDI 336

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SW+ +I G+A  G  EEAFD L  M+      P+     +++S+C +  +L +G+ +H 
Sbjct: 337 ISWSTMISGYAQGGCGEEAFDYLSWMR-REGPRPNEFAFASVLSVCGNMAILEQGKQLHA 395

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           + +   L  + ++ ++L++ YSK  S+ +A  +F+  A  N++VSW +MI+G        
Sbjct: 396 HVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDE-AEYNNIVSWTAMINGYAEHGYSQ 454

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGFSNNT 403
               LFK++  +  +    T +A+L +C+    ++ G         +H    ++  S + 
Sbjct: 455 EAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVH----QICPSKDH 510

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
            G   ++ +    G L  A S++Q +    D   W+ ++ AC  +G      +  + + Q
Sbjct: 511 YG--CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ 568

Query: 464 -QQNASPDSVTLVNVISACGNLELAFEGKSL 493
              N +   +TL N+ +A G  + A E + +
Sbjct: 569 LDPNCAVTHITLANMYAAKGKWKEAAEVRKM 599



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 179/385 (46%), Gaps = 16/385 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF A    + +L T Y+     +  L LF     +DVV+W  +I + V+       +  
Sbjct: 198 KGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKA 257

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E  +  +  T   ++S    +  ++ G  +H   I+ G++   S+ N  + MY+K
Sbjct: 258 FRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSK 317

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  L+ +   F G+   D +SW+T++SG       E+   Y   M   G + +  + +S 
Sbjct: 318 CWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASV 377

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++    +  L  GK +HA  + +G E +  V   ++LI+MYS+CG I+ A + F      
Sbjct: 378 LSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQ--SALINMYSKCGSIKEASKIFDEAEYN 435

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--- 297
           ++VSW A+I+G+A +G  +EA DL  ++  +  + PD  T + +++ C+ + L+  G   
Sbjct: 436 NIVSWTAMINGYAEHGYSQEAIDLFKKLPKV-GLRPDSVTFIAVLAACSHAGLVDLGFHY 494

Query: 298 ----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
                 VH     +           ++D   ++  L+ AE +  ++    D V W++++ 
Sbjct: 495 FNSLSKVHQICPSK------DHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLR 548

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSC 378
                    C + +   +L + P+C
Sbjct: 549 ACRIHGDVDCGKRAAEKILQLDPNC 573


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 218/751 (29%), Positives = 374/751 (49%), Gaps = 48/751 (6%)

Query: 66  EEGIRFDSTTLLIIVSAL---TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +E +R  +  L    +AL        L++G+ +H   +++G   D+ L +  +NMY KCG
Sbjct: 50  DERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCG 109

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L  +   F GM   D V+W  ++S           L  F EM   G   +  +L++A+ 
Sbjct: 110 RLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALK 169

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A     +L +   +HA  +KL     PYVS  +SL+  Y  CG+++ AERA      +  
Sbjct: 170 ACTVGSDLGFTPQVHAQAVKLEGLFDPYVS--SSLVEAYVSCGEVDVAERALLDSPVRSD 227

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWNA+++ +A +G + +   L+ +  +    E    T+ T++  C +  L + G++VHG
Sbjct: 228 VSWNALLNEYARDGDYAKVM-LVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHG 286

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--------- 353
             I+R L  D ++ N L++ YSK  S   A  +F  I    D+V  + MIS         
Sbjct: 287 LVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDE-PDVVHCSLMISCFDRHDMAP 345

Query: 354 ---GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               +F +M  +  + +  T + +    +    +   +SIH   +K GFS      +A++
Sbjct: 346 EAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIV 405

Query: 411 HMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            MY+  G   D + AF L+Q      D + WN ++       + +  ++ FK +  +   
Sbjct: 406 GMYVKTGAVQDAILAFDLMQ----GPDIASWNTLLSGFYSGNNCEHGLRIFKELICE-GV 460

Query: 468 SPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             +  T V ++  C +L +L F G  +H   LKS    D  V   L+ MY +     +A 
Sbjct: 461 LANKYTYVGILRCCTSLMDLRF-GCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNAR 519

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            VF+     ++ +W  ++S +++     +A+E FR +  E   PN+ ++ + LS C+ L 
Sbjct: 520 LVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLA 579

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMIS 628
            L  G Q+H +    G+  +S +SSAL+DMY  C + A                W+++I 
Sbjct: 580 CLGSGLQLHSYTIKSGWN-SSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIIC 638

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y  HG G++A+E F EM + G  P + + + +LSACSH+GL+DEG +Y+  +   Y + 
Sbjct: 639 GYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGIT 698

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  EH+ C+VD+L ++GKL EA   I  +P+ P   +W  +L AC  HG+ ++ ++ AE 
Sbjct: 699 PTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEK 758

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           LF+ +P+++   I LSN+Y  L RW D  ++
Sbjct: 759 LFESQPDDISSCILLSNIYADLKRWNDVAKL 789



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 182/688 (26%), Positives = 310/688 (45%), Gaps = 42/688 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL  Y        + ++F    ++DVV W AM++A          L  F EM EEG+  
Sbjct: 100 SLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVP 159

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +   L   + A T  + L     VH  ++K   + D  + +  V  Y  CG+++ +E   
Sbjct: 160 NGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERAL 219

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                   VSWN +++    +    K +L F ++  SG++    +L + +     LG   
Sbjct: 220 LDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAK 279

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +H L IK G E    ++  N LI MYS+C   E A   F  +   DVV  + +I  
Sbjct: 280 SGQAVHGLVIKRGLETDRVLN--NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISC 337

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           F  +    EAFD+  +M  M  V+P+  T V L  + + +  +   RS+H + ++     
Sbjct: 338 FDRHDMAPEAFDIFMQMSDM-GVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSR 396

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
              + ++++  Y K+ ++  A L F+ +    D+ SWN+++SG            +FKE+
Sbjct: 397 TKGVCDAIVGMYVKTGAVQDAILAFD-LMQGPDIASWNTLLSGFYSGNNCEHGLRIFKEL 455

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +      +  T + IL  C S   L FG  +H   LK GF  +      L+ MY+  G  
Sbjct: 456 ICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCF 515

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +  R+    D   W +V+    +    ++AI+ F+SM  ++N  P+  TL   +S
Sbjct: 516 TNARLVFDRLKER-DVFSWTVVMSTYAKTDEGEKAIECFRSML-RENKRPNDATLATSLS 573

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTR-VQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            C +L     G  LH   +KS  G ++  V +AL+ MY +C ++  A  +F+     +L 
Sbjct: 574 VCSDLACLGSGLQLHSYTIKS--GWNSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLV 631

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN +I  ++Q+    +ALE F+ +  E   P+EI+ V +LSAC+  G+L  G++     
Sbjct: 632 EWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRY---- 687

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           F L           L  +Y    +   ++ M+      GK  EA  L +EM    + P  
Sbjct: 688 FKL-----------LSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEM---PLTPDA 733

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLE 683
           S   ++L AC   G ++   +    + E
Sbjct: 734 SLWKTILGACRMHGNIEIAERAAEKLFE 761



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 272/592 (45%), Gaps = 38/592 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S+SL+ AY +    + +     ++  +  V+WNA++     +      +  F ++VE G
Sbjct: 198 VSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESG 257

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                 TL  ++    ++   K G+ VH L IK G+  D  L N  + MY+KC     + 
Sbjct: 258 DEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAY 317

Query: 129 CTFSGMHCADTVSWNTIMSGCL--HNNYPEKCLLYFR--EMGWSGEQADNVSLSSAVAAS 184
             F+ +   D V  + ++S C   H+  PE   ++ +  +MG    Q   V L  A+ AS
Sbjct: 318 EVFARIDEPDVVHCSLMIS-CFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGL--AIVAS 374

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
              G+++  + IHA  +K G+  S    V ++++ MY + G ++ A  AF  M   D+ S
Sbjct: 375 R-TGDVNLCRSIHAHIVKSGF--SRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIAS 431

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN ++ GF      E    +  E+ +   V  +  T V ++  C   + LR G  VH   
Sbjct: 432 WNTLLSGFYSGNNCEHGLRIFKEL-ICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACV 490

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------- 355
           ++     D  +   L+D Y ++   + A L+F+ +    D+ SW  ++S           
Sbjct: 491 LKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKE-RDVFSWTVVMSTYAKTDEGEKA 549

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              F+ ML    + + +TL   L  C+    L  G  +H + +K G+ N+++  +AL+ M
Sbjct: 550 IECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGW-NSSVVSSALVDM 608

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y+ CG+L  A  L    S   D   WN +I    Q+GH  +A++ F+ M  + N  PD +
Sbjct: 609 YVKCGNLADAEMLFDE-SDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNV-PDEI 666

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVF 529
           T V V+SAC +  L  EG+    L L S+ G+   +++   ++ +  +   +  A S + 
Sbjct: 667 TFVGVLSACSHAGLLDEGRRYFKL-LSSVYGITPTLEHYACMVDILAKAGKLAEAESLIN 725

Query: 530 ESCYNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEISIVSILS 577
           E     +   W  ++ A   +     AE  A +LF   E +P++IS   +LS
Sbjct: 726 EMPLTPDASLWKTILGACRMHGNIEIAERAAEKLF---ESQPDDISSCILLS 774



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 215/487 (44%), Gaps = 23/487 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       +  L+  YS     E +  +F      DVV  + MI+    +         
Sbjct: 291 RGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDI 350

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M + G++ +  T + +    ++   +   R +H   +K+G      +C+  V MY K
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVK 410

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G +  +   F  M   D  SWNT++SG    N  E  L  F+E+   G  A+  +    
Sbjct: 411 TGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGI 470

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     L +L +G  +HA  +K G++      V+  L+ MY Q G    A   F  +  +
Sbjct: 471 LRCCTSLMDLRFGCQVHACVLKSGFQGD--YDVSKMLLDMYVQAGCFTNARLVFDRLKER 528

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV SW  ++  +A   + E+A +    M L  +  P+ AT+ T +S+C+D   L  G  +
Sbjct: 529 DVFSWTVVMSTYAKTDEGEKAIECFRSM-LRENKRPNDATLATSLSVCSDLACLGSGLQL 587

Query: 301 HGYAIRRLLGYDLLMMNS-LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           H Y I+   G++  +++S L+D Y K  +L+ AE+LF+  +  +DLV WN++I G     
Sbjct: 588 HSYTIKS--GWNSSVVSSALVDMYVKCGNLADAEMLFDE-SDTHDLVEWNTIICGYAQHG 644

Query: 356 --------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGV 406
                   F+EM+   +     T + +L +C+    L+ G+          G +      
Sbjct: 645 HGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHY 704

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             ++ +    G L  A SL+  +    D S W  ++ AC  +G+ + A +  + + + Q 
Sbjct: 705 ACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQ- 763

Query: 467 ASPDSVT 473
             PD ++
Sbjct: 764 --PDDIS 768


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 216/713 (30%), Positives = 366/713 (51%), Gaps = 44/713 (6%)

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L QGR +H   + +G+ +D  L +  + MY KCG ++ +   F  +      SWN I++
Sbjct: 1   ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
               N +  K +  FR M  +G + D+ +LSS + A + L +L  GK IH+  +  G   
Sbjct: 61  AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S  + V N+L+SMY++C  ++ A   F  +  K VVSWNA+I   A  G+ E+A  L   
Sbjct: 121 S--IIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKR 178

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           M+L    EP+  T  ++ + C+     RE G+ +H       L  ++ +  +++  Y K 
Sbjct: 179 MEL----EPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKF 234

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A  +FN I   N +VSWN+M+              ++ EM+    Q    T++  
Sbjct: 235 GKVGMARQVFNGIQHKN-VVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIA 293

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L    S   L+ G  +H   +  G+ +N    NAL+ MY  C +L AA  +  ++  + D
Sbjct: 294 LGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAH-D 352

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              W  +IVA TQ+G  +EA++ +K M + +   PD VT  +V+SAC N      G++LH
Sbjct: 353 VVSWTALIVAYTQHGRNREALELYKQM-EGEGMEPDKVTFTSVLSACSNTSDLELGQALH 411

Query: 495 GLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCN-LCTWNCMISAFSQ--- 549
              L    G  D  +  ALI MY +C  +  +S +F+SC +   +  WN MI+A+ Q   
Sbjct: 412 ARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGY 471

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-HLGFQENSFISS 608
           ++A V   ++ +    +P+E ++ SILSAC +L  L  G+Q+H  +       +N  + +
Sbjct: 472 SRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLN 531

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL+ MY++C               +   +W+ +ISAY   G    A+ L+  M   G++P
Sbjct: 532 ALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQP 591

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
           T+ + + +  AC H+GLVDE   Y+ +M+E+  + P  +H+ C+V +L R+GKL+EA + 
Sbjct: 592 TEPTFLCVFLACGHAGLVDECKWYFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDL 650

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           + ++P  P    W ++L AC  HGD K  ++ A+   +L+ ++   Y+ LSN+
Sbjct: 651 LHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 194/692 (28%), Positives = 330/692 (47%), Gaps = 51/692 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y      + ++ +F+    + + +WN +I A  +NR     +  F  M   GI+ D
Sbjct: 27  LLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPD 86

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           S TL  ++ A + +  L++G+ +H  ++  G+ +   + N  V+MYA+C  L+ +   F 
Sbjct: 87  SATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFD 146

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE-LS 191
            +     VSWN +++ C      E+ L  F+ M     + + V+ +S   A + L +   
Sbjct: 147 KIESKSVVSWNAMIAACARQGEAEQALQLFKRMEL---EPNEVTFASVFNACSLLPDHRE 203

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH   I+ G      V+V  ++++MY + G +  A + F G+  K+VVSWNA++  
Sbjct: 204 VGKRIHDR-IR-GSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGA 261

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N    EA ++ HEM + + V+ D  TVV  + + A   LL+ G  +H  ++    GY
Sbjct: 262 YTQNNLDREALEVYHEM-VAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAH--GY 318

Query: 312 D--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCS 364
           D  + + N+L+  Y K N L  A  +F+ +   +D+VSW ++I      G  +E L L  
Sbjct: 319 DSNIKVQNALISMYGKCNELDAARRVFSKVRA-HDVVSWTALIVAYTQHGRNREALELYK 377

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIGVNALMHMYIN 415
           Q           T  ++L +C++   LE G+++H   L  K GFS+  + V AL++MY+ 
Sbjct: 378 QMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVL-VAALINMYVK 436

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L  +  + Q          WN +I A  Q G+ + A+  +  M +Q+   PD  TL 
Sbjct: 437 CGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLY-DMMKQRGLDPDESTLS 495

Query: 476 NVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           +++SAC  L+   +G+ LH   + S     +  V NALI+MY  C +I+ A  VF+   N
Sbjct: 496 SILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKN 555

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            ++ +W  +ISA+ Q     RAL L+R +  E   P E + + +  AC   G++   K  
Sbjct: 556 RDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWY 615

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                   FQ  S I   +   + +      +S +++     GK  EA +L H M     
Sbjct: 616 --------FQ--SMIEDRITPTFDH------YSCVVTVLSRAGKLEEAEDLLHSM---PF 656

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            P      SLL AC   G +    +  +  +E
Sbjct: 657 NPGSVGWTSLLGACRTHGDLKRARRAADEAME 688



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 157/619 (25%), Positives = 283/619 (45%), Gaps = 54/619 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + +    +L++ Y+  S  + +  +F +  +K VV+WNAMI AC         L  
Sbjct: 116 RGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQL 175

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ-GRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M  E    +  T   + +A + +   ++ G+ +H     + + A+ ++    V MY 
Sbjct: 176 FKRMELEP---NEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYG 232

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G +  +   F+G+   + VSWN ++     NN   + L  + EM     Q D V++  
Sbjct: 233 KFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVI 292

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+  SA L  L  G  +H L +  GY+ +  + V N+LISMY +C +++AA R F  +  
Sbjct: 293 ALGISASLRLLKLGIELHELSVAHGYDSN--IKVQNALISMYGKCNELDAARRVFSKVRA 350

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            DVVSW A+I  +  +G+  EA +L  +M+    +EPD  T  +++S C+++  L  G++
Sbjct: 351 HDVVSWTALIVAYTQHGRNREALELYKQME-GEGMEPDKVTFTSVLSACSNTSDLELGQA 409

Query: 300 VHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
           +H   + R  G+ D +++ +L++ Y K   L  +  +F +      +V WN+MI+   +E
Sbjct: 410 LHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQE 469

Query: 359 --------MLYLCSQFSF----STLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIG 405
                   +  +  Q       STL +IL +C   + LE G+ +H   +     S N + 
Sbjct: 470 GYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVV 529

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           +NAL+ MY +CG++  A ++ +R+  N D   W I+I A  Q G  + A++ ++ M   +
Sbjct: 530 LNALISMYASCGEIREAKAVFKRMK-NRDVVSWTILISAYVQGGDARRALRLYRRML-VE 587

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P   T + V  ACG+  L  E K                                  
Sbjct: 588 GVQPTEPTFLCVFLACGHAGLVDECKWYF------------------------------- 616

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
            ++ E         ++C+++  S+      A +L   + F P  +   S+L AC   G L
Sbjct: 617 QSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDL 676

Query: 586 RHGKQIHGHVFHLGFQENS 604
           +  ++       L  Q+++
Sbjct: 677 KRARRAADEAMELDRQDSA 695



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 238/497 (47%), Gaps = 36/497 (7%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A++  +T+++T Y        +  +F    +K+VV+WNAM+ A  +N      L  + EM
Sbjct: 219 ANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEM 278

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           V + ++ D  T++I +     +  LK G  +H LS+  G  ++  + N  ++MY KC +L
Sbjct: 279 VAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNEL 338

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           +++   FS +   D VSW  ++     +    + L  +++M   G + D V+ +S ++A 
Sbjct: 339 DAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSAC 398

Query: 185 ACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD- 241
           +   +L  G+ +HA  L  K G+ D   V+   +LI+MY +CG ++ +   F   +CKD 
Sbjct: 399 SNTSDLELGQALHARLLARKDGFSDGVLVA---ALINMYVKCGRLDLSSEIF--QSCKDT 453

Query: 242 --VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
             VV WNA+I  +   G    A D L++M   R ++PD +T+ +++S CA+   L +G  
Sbjct: 454 KAVVVWNAMITAYEQEGYSRAAVD-LYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQ 512

Query: 300 VHGYAI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
           +H   I  R    + +++N+L+  Y+    + +A+ +F  +    D+VSW  +IS   + 
Sbjct: 513 LHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKN-RDVVSWTILISAYVQG 571

Query: 358 -----------EMLYLCSQFSFSTLLAILPSCNSPESLE----FGKSIHCWQLKLGFSNN 402
                       ML    Q +  T L +  +C     ++    + +S+   ++   F + 
Sbjct: 572 GDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWYFQSMIEDRITPTFDHY 631

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           +  V  L       G L  A  LL  +  N  +  W  ++ AC  +G  + A +      
Sbjct: 632 SCVVTVLS----RAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAM 687

Query: 463 Q--QQNASPDSVTLVNV 477
           +  +Q+++P  V L NV
Sbjct: 688 ELDRQDSAP-YVLLSNV 703


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 206/687 (29%), Positives = 358/687 (52%), Gaps = 53/687 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  ++   + +N   + +L + +M   G + DN +  + + A A L ++  GK IHA   
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 202 KLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           K GY  DS  V+V N+L+++Y +CGD  A  + F  ++ ++ VSWN++I       K+E 
Sbjct: 121 KFGYGVDS--VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 178

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLLMMN 317
           A +    M L   VEP   T+V++   C++  +   L  G+ VH Y +R+    +  ++N
Sbjct: 179 ALEAFRCM-LDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIIN 236

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  Y K   L+ +++L  +     DLV+WN+++S L             +EM+    +
Sbjct: 237 TLVAMYGKMGKLASSKVLLGSFEG-RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVE 295

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFS 424
               T+ ++LP+C+  E L  GK +H + LK G    N+   +AL+ MY NC  +++   
Sbjct: 296 PDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCR 355

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   +  +     WN +I    QN + +EA+  F  M +      +S T+  V+ AC   
Sbjct: 356 VFDGM-FDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRS 414

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               + +++HG  +K  +  D  VQNAL+ MY R   I  A  +F    + +L TWN +I
Sbjct: 415 GAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTII 474

Query: 545 SA--FSQNKA------------EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           +   FS+               E +A E    +  +PN I++++IL +C  L  L  GK+
Sbjct: 475 TGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKE 534

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH +        +  + SAL+DMY+ C               ++   W+ ++ AYG HG 
Sbjct: 535 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGN 594

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             +AI++   M   G++P + + IS+ +ACSHSG+V+EGL+ + NM ++Y V P ++H+ 
Sbjct: 595 SQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYA 654

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           C+VD+LGR+G+++EAY+ I  +P    K G W ++L AC  H + ++G+  A+ L +LEP
Sbjct: 655 CVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEP 714

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
               +Y+ L+N+Y + G W  A E+ +
Sbjct: 715 NVASHYVLLANIYSSAGLWYKATEVRR 741



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/737 (24%), Positives = 342/737 (46%), Gaps = 75/737 (10%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           W  ++ + V +  +   +  + +M+  GI+ D+     ++ A+  +  +  G+ +H    
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 101 KAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           K G   DS ++ N  VN+Y KCGD  +    F  +   + VSWN+++S        E  L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 160 LYFREMGWSGEQADNVSLSSAVAASAC----LGE-LSYGKVIHALGIKLGYEDSPYVSVT 214
             FR M    E  +  S +    A AC    + E L  GK +HA G++ G  +S    + 
Sbjct: 181 EAFRCM--LDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNS---FII 235

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L++MY + G + +++        +D+V+WN ++     N +F EA + L EM ++  V
Sbjct: 236 NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREM-VLEGV 294

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAE 333
           EPD  T+ +++  C+   +LR G+ +H YA++   L  +  + ++L+D Y     +    
Sbjct: 295 EPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGC 354

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA-ILPSCNS 380
            +F+ +     +  WN+MI+G            LF EM       + ST +A ++P+C  
Sbjct: 355 RVFDGMFD-RKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVR 413

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +    ++IH + +K G   +    NALM MY   G +  A  +  ++  + D   WN 
Sbjct: 414 SGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM-EDRDLVTWNT 472

Query: 441 VIVACTQNGHFQEAIKTFKSMT-QQQNAS---------PDSVTLVNVISACGNLELAFEG 490
           +I     +   ++A+     M   ++ AS         P+S+TL+ ++ +C  L    +G
Sbjct: 473 IITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKG 532

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H  A+K+ +  D  V +AL+ MY +C  ++ +  VF+     N+ TWN ++ A+  +
Sbjct: 533 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMH 592

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                A+++ R +  +   PNE++ +S+ +AC+  G++  G +I  +             
Sbjct: 593 GNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYN------------- 639

Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
             +   Y    S+  ++ ++   G  G+  EA +L + +  +  +    S  SLL AC  
Sbjct: 640 --MKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWS--SLLGACRI 695

Query: 668 SGLVDEGLQYYNNMLEEYDVRPET-EHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKP 723
              ++ G     N+++   + P    H+V + ++   +G   +A E  +N+    ++ +P
Sbjct: 696 HNNLEIGEIAAQNLIQ---LEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEP 752

Query: 724 GVWGAMLSACS--HHGD 738
           G        CS   HGD
Sbjct: 753 G--------CSWIEHGD 761



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 245/508 (48%), Gaps = 31/508 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +L+  Y     F +   +F     ++ V+WN++I++        M L  F  M++E 
Sbjct: 131 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDED 190

Query: 69  IRFDSTTLLIIVSALTQM---NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           +   S TL+ +  A +       L  G+ VH   ++ G + +S + N  V MY K G L 
Sbjct: 191 VEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLA 249

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           SS+         D V+WNT++S    N    + L Y REM   G + D  ++SS + A +
Sbjct: 250 SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L  L  GK +HA  +K G  D     V ++L+ MY  C  + +  R F GM  + +  W
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLW 368

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA+I G+A N   EEA  L  EM+    +  +  T+  ++  C  S    +  ++HG+ +
Sbjct: 369 NAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVV 428

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKE------ 358
           +R L  D  + N+LMD YS+   +  A+ +F  +    DLV+WN++I+G +F E      
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMED-RDLVTWNTIITGYVFSERHEDAL 487

Query: 359 -MLY-----------LCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
            ML+             S+ S      TL+ ILPSC +  +L  GK IH + +K   + +
Sbjct: 488 LMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 547

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +AL+ MY  CG L  +  +  +I    +   WN++++A   +G+ Q+AI   + M 
Sbjct: 548 VAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDAIDMLR-MM 605

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG 490
             Q   P+ VT ++V +AC +  +  EG
Sbjct: 606 MVQGVKPNEVTFISVFAACSHSGMVNEG 633


>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
 gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
          Length = 947

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 217/789 (27%), Positives = 387/789 (49%), Gaps = 44/789 (5%)

Query: 2   GFLAH-LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           GFL   +    +L++ Y      + + ++F E CNKD+V+W AMI+A V+N      +  
Sbjct: 157 GFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVC 216

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  +G++    T + I+ A+ +    +    +H   I+ G+  D  L N+ V  Y K
Sbjct: 217 FWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGK 276

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD+   + +F  +   + VSW+  ++    N Y  + +   ++M   G QA+ V+  S 
Sbjct: 277 CGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSI 336

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           + AS    E+  G+ + +  I+ GY     V+V NSL++MY +C  +  A+  FW M   
Sbjct: 337 LDASV-WEEIEEGEFLRSRIIESGY--GSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEER 393

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+ +SW++++  +A N +  EA  L   M L   ++PD  T+++++  C D    ++   
Sbjct: 394 KNEISWSSLVAAYAQNNQATEAMKLFQHMDL-EGLKPDRVTLISVLDACGDLRASKQSSQ 452

Query: 300 VHGYAIRRLLGYDLLMMNSL---MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           +H   +   L  D+++ N+L   ++ Y++ +SL  A  +F  +    D + WNS++    
Sbjct: 453 IHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCR-KDAICWNSLLAAYA 511

Query: 353 -SGLFKEMLYLCSQFSFS----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
            SG  KE L +  +              T ++ + +C +   L  G   H    ++G  +
Sbjct: 512 QSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDS 571

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N +  N+L+ MY  C  L  A S+  RI    D   WN +I A  QNG  + A++T+ +M
Sbjct: 572 NVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAM 631

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            ++    PD +T ++V+ AC  L    EG+ +H  A +        V   L+ MYGRC +
Sbjct: 632 IRE-GVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGN 690

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
              A   F      +   WN + +A +Q   + RAL + R ++ E   P+ ++ +++L  
Sbjct: 691 AMEAELAFGKLQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDT 750

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C     L  GK  H     LGF  +  + +ALL+MY  C               +++ +W
Sbjct: 751 CADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSLREANRVFAAMPVRNSVSW 810

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +++I AY  +G    AI LF +M   GI P + S +S+  ACSH+G+++EG +Y+  M+ 
Sbjct: 811 NTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFACSHAGMLEEGSKYFQYMVA 870

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
           ++ + P  EH+ C VD+LGR+G+L +A E +  +    +   W  +L + +   + +  K
Sbjct: 871 DHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMAEDARSLDWLILLGSSTLQENVEQAK 930

Query: 744 QVAELLFKL 752
           +  +   KL
Sbjct: 931 RAVQHAVKL 939



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 205/776 (26%), Positives = 361/776 (46%), Gaps = 65/776 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      E +  +     + +V +W  M+ A  +N  +   L  F +M  EG+R +
Sbjct: 70  LINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRAN 129

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSECTF 131
             T   I+SAL       +G+  H    + G + D  +  N  V++Y +C +++ +   F
Sbjct: 130 RVT---IISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVF 186

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSW  ++S  + N +P++ ++ F  M   G +   V+  + + A     +  
Sbjct: 187 DEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDAR 246

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IH   I+ G E      + N L+  Y +CGD+E  + +F  +  K+VVSW+  I  
Sbjct: 247 VCEEIHLQIIETGLEKDD--KLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAA 304

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGYAIRRLL 309
           F+ NG F EA   L +M L    E   A  VT +S+   S+   + EG  +    I    
Sbjct: 305 FSQNGYFWEAIRQLQKMDL----EGVQANEVTFVSILDASVWEEIEEGEFLRSRIIESGY 360

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G ++ + NSL++ Y K +SL  A+ +F ++    + +SW+S+++             LF+
Sbjct: 361 GSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQ 420

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN---ALMHMYI 414
            M     +    TL+++L +C    + +    IH   L+ G   + +  N   AL++MY 
Sbjct: 421 HMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYA 480

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ--QNASPDSV 472
            C  L  A  +   +    D  CWN ++ A  Q+G  +EA++ F+ M  +  ++  P+ V
Sbjct: 481 RCHSLEDARKVFAGMCRK-DAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDV 539

Query: 473 TLVNVISACGN-LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           T V+ I AC N ++LA  G   H  A +  M  +  V N+LI MYG+C+ ++ A +VF  
Sbjct: 540 TFVSTIDACANSMDLA-SGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNR 598

Query: 532 CYNC-NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                +L +WN +ISAF+QN    RALE +  +  E   P+ I+ +S+L AC  LG +  
Sbjct: 599 ILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAE 658

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG---------------- 631
           G++IH      GF+    +   L++MY  C  NA  + +  A+G                
Sbjct: 659 GREIHRQASEGGFESVDAVLGTLVNMYGRC-GNAMEAEL--AFGKLQQRDAIAWNAVAAA 715

Query: 632 --YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYD 686
               G    A+ +   M N G++P   + I+LL  C+    + EG  ++   +E    +D
Sbjct: 716 ITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFD 775

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +         +++M G+ G L+EA      +P++     W  ++ A + +G  K+ 
Sbjct: 776 IILGN----ALLNMYGKCGSLREANRVFAAMPVRNSVS-WNTLIVAYAQNGHVKLA 826



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 179/680 (26%), Positives = 319/680 (46%), Gaps = 54/680 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           + +T  +++    ++  L+ G+ +H  S++ GM  +  + N+ +NMY KCG L  +    
Sbjct: 28  NPSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKIL 87

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M  ++  SW  +++    N + +  L  F +M   G +A+ V++ SA+    C    S
Sbjct: 88  DRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISAL---GCCKSFS 144

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+  H+   + G+     V + N+L+S+Y +C +++ A   F  +  KD+VSW A+I  
Sbjct: 145 RGQWFHSRIKQEGFLPDD-VMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISA 203

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           F  NG  + A      MQ    V+P   T +T++    ++   R    +H   I   L  
Sbjct: 204 FVQNGHPDRAMVCFWSMQ-ADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEK 262

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF 366
           D  ++N L+  Y K   + K +  F  +   N +VSW+  I+     G F E +    + 
Sbjct: 263 DDKLLNLLVRSYGKCGDMEKMKESFEKLDEKN-VVSWSGTIAAFSQNGYFWEAIRQLQKM 321

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T ++IL + +  E +E G+ +    ++ G+ +N    N+L++MY  C  L
Sbjct: 322 DLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSL 380

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +    +   W+ ++ A  QN    EA+K F+ M   +   PD VTL++V+ 
Sbjct: 381 GNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHM-DLEGLKPDRVTLISVLD 439

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQN---ALITMYGRCRDIKSASTVFESCYNCN 536
           ACG+L  + +   +H   L++ +  D  V N   AL+ MY RC  ++ A  VF      +
Sbjct: 440 ACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKD 499

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE------PNEISIVSILSACTQLGVLRHGKQ 590
              WN +++A++Q+ +   AL++FR ++ E      PN+++ VS + AC     L  G  
Sbjct: 500 AICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIV 559

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCK----------------SNAAWSSMISAYGYHG 634
            H     +G   N  ++++L+ MY  CK                   +W+++ISA+  +G
Sbjct: 560 FHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNG 619

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM----LEEYDVRPE 690
            G  A+E +  M   G+RP + + IS+L AC+  G + EG + +        E  D    
Sbjct: 620 DGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLG 679

Query: 691 TEHHVCIVDMLGRSGKLQEA 710
           T     +V+M GR G   EA
Sbjct: 680 T-----LVNMYGRCGNAMEA 694



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 50/318 (15%)

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             ++A++  +    Q++A+P +  L+  +  C  L     GK +H  +++  MG +  V+
Sbjct: 12  ELEQAVEDLEQ--HQRDANPSTYALM--LDWCVRLGALEAGKRIHRHSVECGMGKNRFVE 67

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--- 566
           N LI MYG+C  ++ A  + +   + N+ +W  M++A++QN     ALE F  +E E   
Sbjct: 68  NLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVR 127

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF-QENSFISSALLDMYSNC-------- 617
            N ++I+S L  C        G+  H  +   GF  ++  I +AL+ +Y  C        
Sbjct: 128 ANRVTIISALGCCKSFS---RGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARS 184

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS---- 666
                  K   +W++MISA+  +G    A+  F  M   G++P + + I++L A      
Sbjct: 185 VFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRD 244

Query: 667 -------HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
                  H  +++ GL+  + +L              +V   G+ G +++  E  + L  
Sbjct: 245 ARVCEEIHLQIIETGLEKDDKLLN------------LLVRSYGKCGDMEKMKESFEKLD- 291

Query: 720 QPKPGVWGAMLSACSHHG 737
           +     W   ++A S +G
Sbjct: 292 EKNVVSWSGTIAAFSQNG 309


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 191/616 (31%), Positives = 333/616 (54%), Gaps = 36/616 (5%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K+IH   I  G +   +++  N LI++ S+   ++ A   F  M  K++++W++++  ++
Sbjct: 69  KIIHGQIIVSGLQSDTFLA--NILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYS 126

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G  EEA  +  ++Q      P+   + ++I  C    ++ +G  +HG+ +R     D+
Sbjct: 127 QQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 186

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            +  SL+DFYSK+ ++ +A L+F+ ++     V+W ++I+G            LF +M  
Sbjct: 187 YVGTSLIDFYSKNGNIEEARLVFDQLSE-KTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 245

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                    + ++L +C+  E LE GK IH + L+ G   +   VN L+  Y  C  + A
Sbjct: 246 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 305

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
              L  ++   +  S W  +I    QN    EA+K F  M +     PD     +V+++C
Sbjct: 306 GRKLFDQMVVKNIIS-WTTMISGYMQNSFDWEAMKLFGEMNRL-GWKPDGFACTSVLTSC 363

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
           G+ E   +G+ +H   +K+ +  D  V+N LI MY +   +  A  VF+     N+ ++N
Sbjct: 364 GSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYN 423

Query: 542 CMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MI  +S  +    ALELF  +     +PNE +  ++++A + L  LRHG+Q H  +  +
Sbjct: 424 AMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM 483

Query: 599 GFQENSFISSALLDMYSNCKS--------NAA-------WSSMISAYGYHGKGWEAIELF 643
           G     F+++AL+DMY+ C S        N++       W+SMIS +  HG+  EA+ +F
Sbjct: 484 GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF 543

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            EM   GI+P   + +++LSACSH+G V++GL ++N+M   + ++P TEH+ C+V +LGR
Sbjct: 544 REMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGR 602

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           SGKL EA EFI+ +PI+P   VW ++LSAC   G+ ++GK  AE+    +P++ G YI L
Sbjct: 603 SGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILL 662

Query: 764 SNMYVALGRWKDAVEI 779
           SN++ + G W D  ++
Sbjct: 663 SNIFASKGMWADVKKV 678



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 169/600 (28%), Positives = 289/600 (48%), Gaps = 45/600 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           +++H   I +G+ +D+ L N+ +N+ +K   ++++   F  M   + ++W++++S     
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 153 NYPEKCLLYFREMGW-SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            Y E+ L+ F ++   SGE  +   L+S + A   LG +  G  +H   ++ G++   YV
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               SLI  YS+ G+IE A   F  ++ K  V+W  II G+   G+   + +L  +M+  
Sbjct: 189 GT--SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRET 246

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            +V PD   V +++S C+    L  G+ +H Y +RR    D+ ++N L+DFY+K N +  
Sbjct: 247 -NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 305

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
              LF+ +   N ++SW +MISG            LF EM  L  +       ++L SC 
Sbjct: 306 GRKLFDQMVVKN-IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCG 364

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S E+LE G+ +H + +K    ++    N L+ MY     L+ A  +   ++  +  S +N
Sbjct: 365 SREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS-YN 423

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I   +      EA++ F  M + +   P+  T   +I+A  NL     G+  H   +K
Sbjct: 424 AMIEGYSSQEKLSEALELFHEM-RVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVK 482

Query: 500 SLMGLD--TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
             MGLD    V NAL+ MY +C  I+ A  +F S    ++  WN MIS  +Q+     AL
Sbjct: 483 --MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEAL 540

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            +FR +  E   PN ++ V++LSAC+  G +  G      +   G +  +          
Sbjct: 541 GMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGT---------- 590

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                   ++ ++S  G  GK +EA E   +M    I P      SLLSAC  +G V+ G
Sbjct: 591 ------EHYACVVSLLGRSGKLFEAKEFIEKM---PIEPAAIVWRSLLSACRIAGNVELG 641



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 273/600 (45%), Gaps = 55/600 (9%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FLA++     L+   S     +++  +F +  +K+++TW++M++   +       L  F 
Sbjct: 85  FLANI-----LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFV 139

Query: 63  EMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           ++  + G   +   L  ++ A TQ+  +++G  +H   +++G   D  +    ++ Y+K 
Sbjct: 140 DLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKN 199

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +   F  +     V+W TI++G          L  F +M  +    D   +SS +
Sbjct: 200 GNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL 259

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A + L  L  GK IHA  ++ G E    VSV N LI  Y++C  ++A  + F  M  K+
Sbjct: 260 SACSMLEFLEGGKQIHAYVLRRGTEMD--VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 317

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW  +I G+  N    EA  L  EM  +   +PD     ++++ C     L +GR VH
Sbjct: 318 IISWTTMISGYMQNSFDWEAMKLFGEMNRL-GWKPDGFACTSVLTSCGSREALEQGRQVH 376

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y I+  L  D  + N L+D Y+KSN L  A+ +F+ +A  N ++S+N+MI G       
Sbjct: 377 AYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN-VISYNAMIEGYSSQEKL 435

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM     + +  T  A++ + ++  SL  G+  H   +K+G        NAL
Sbjct: 436 SEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 495

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  +    S   D  CWN +I    Q+G  +EA+  F+ M  ++   P
Sbjct: 496 VDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMM-KEGIQP 553

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           + VT V V+SAC +      G+   GL             N   +M G    IK  +   
Sbjct: 554 NYVTFVAVLSACSH-----AGRVEDGL-------------NHFNSMPG--FGIKPGTE-- 591

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + C++S   ++     A E    +  EP  I   S+LSAC   G +  GK
Sbjct: 592 ---------HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGK 642



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 221/463 (47%), Gaps = 16/463 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   TSL+  YS     E +  +F +   K  VTW  +I    +     + L  F
Sbjct: 181 GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELF 240

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   +  ++SA + +  L+ G+ +H   ++ G   D S+ NV ++ Y KC
Sbjct: 241 AQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC 300

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +    F  M   + +SW T++SG + N++  + +  F EM   G + D  + +S +
Sbjct: 301 NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVL 360

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +      L  G+ +HA  IK   E   +V   N LI MY++   +  A++ F  M  ++
Sbjct: 361 TSCGSREALEQGRQVHAYTIKANLESDEFVK--NGLIDMYAKSNLLIDAKKVFDVMAEQN 418

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+S+NA+I+G++   K  EA +L HEM++ R  +P+  T   LI+  ++   LR G+  H
Sbjct: 419 VISYNAMIEGYSSQEKLSEALELFHEMRV-RLQKPNEFTFAALITAASNLASLRHGQQFH 477

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
              ++  L +   + N+L+D Y+K  S+ +A  +FN+ +   D+V WNSMIS        
Sbjct: 478 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEA 536

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
               G+F+EM+    Q ++ T +A+L +C+    +E G +        G    T     +
Sbjct: 537 EEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACV 596

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           + +    G L  A   ++++        W  ++ AC   G+ +
Sbjct: 597 VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVE 639



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 24/258 (9%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q  N  P      N++    +       K +HG  + S +  DT + N LI +  +   +
Sbjct: 41  QIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRV 100

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSA 578
            +A  VF+   + NL TW+ M+S +SQ      AL +F  L+ +    PNE  + S++ A
Sbjct: 101 DNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRA 160

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           CTQLGV+  G Q+HG V   GF ++ ++ ++L+D YS                 K+   W
Sbjct: 161 CTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTW 220

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +++I+ Y   G+   ++ELF +M  + + P +  V S+LSACS    ++ G Q     + 
Sbjct: 221 TTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ-----IH 275

Query: 684 EYDVRPETEHHVCIVDML 701
            Y +R  TE  V +V++L
Sbjct: 276 AYVLRRGTEMDVSVVNVL 293


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 217/642 (33%), Positives = 335/642 (52%), Gaps = 38/642 (5%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G   D+ +    + A   + ++  G  IH L IK GY+    V V NSL+SMY++C DI 
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYD--SIVFVANSLVSMYAKCNDIL 62

Query: 229 AAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
            A + F  M  + DVVSWN+II  ++LNG+  EA  L  EMQ    V  +  T+V  +  
Sbjct: 63  GARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQ-KAGVGANTYTLVAALQA 121

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           C DS   + G  +H   ++     D+ + N+L+  + +   +S A  +F+ +    D ++
Sbjct: 122 CEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDE-KDNIT 180

Query: 348 WNSMISGLFKEMLY------LCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WNSMI+G  +  LY       C       +    +L++IL +      L  GK IH + +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K    +N    N L+ MY  C  +  A  +  ++  N D   W  VI A  QN    EA+
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMI-NKDLISWTTVIAAYAQNNCHTEAL 299

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           K  + + Q +    D++ + + + AC  L      K +HG  LK  +  D  +QN +I +
Sbjct: 300 KLLRKV-QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDV 357

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISI 572
           Y  C +I  A+ +FES    ++ +W  MIS +  N     AL +F   +    EP+ I++
Sbjct: 358 YADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITL 417

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
           VSILSA   L  L  GK+IHG +F  GF       ++L+DMY+ C               
Sbjct: 418 VSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           KS   W++MI+AYG HG+G  A+ELF  M +  + P   + ++LL ACSHSGL++EG + 
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
              M  +Y + P  EH+ C+VD+LGR+  L+EAY F+K++ I+P   VW A L AC  H 
Sbjct: 538 LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHS 597

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + K+G+  A+ L  L+P++ G Y+ +SN++ A GRWKD  E+
Sbjct: 598 NKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEV 639



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 192/730 (26%), Positives = 345/730 (47%), Gaps = 63/730 (8%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+ FDS T   ++ A   +  + +G  +H L IK G  +   + N  V+MYAKC D+  +
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 128 ECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
              F  M+   D VSWN+I+S    N    + L  FREM  +G  A+  +L +A+ A   
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
                 G  IHA  +K       YV+  N+L++M+ + G +  A R F  +  KD ++WN
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVA--NALVAMHVRFGKMSYAARIFDELDEKDNITWN 182

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I GF  NG + EA      +Q   +++PD  +++++++       L  G+ +H YA++
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQ-DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMK 241

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLY 361
             L  +L + N+L+D YSK   ++ A L+F+ +    DL+SW ++I+   +     E L 
Sbjct: 242 NWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMIN-KDLISWTTVIAAYAQNNCHTEALK 300

Query: 362 LCSQ-----FSFSTLL--AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L  +         T++  + L +C+    L   K +H + LK G S+  +  N ++ +Y 
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQ-NMIIDVYA 359

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           +CG++  A  + + I    D   W  +I     NG   EA+  F  M ++ +  PDS+TL
Sbjct: 360 DCGNINYATRMFESIK-CKDVVSWTSMISCYVHNGLANEALGVFYLM-KETSVEPDSITL 417

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V+++SA  +L    +GK +HG   +    L+    N+L+ MY  C  +++A  VF    +
Sbjct: 418 VSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            +L  W  MI+A+  +     A+ELF  +E +   P+ I+ +++L AC+  G++  GK++
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537

Query: 592 HGHVFHLGFQENSFIS--SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
                   +Q   +    + L+D+                    G+     E +H + + 
Sbjct: 538 L-ETMKCKYQLEPWPEHYACLVDLL-------------------GRANHLEEAYHFVKSM 577

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQ 708
            I PT     + L AC        G      +L   D+ P++   +V I ++   SG+ +
Sbjct: 578 QIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLL---DLDPDSPGSYVLISNVFAASGRWK 634

Query: 709 EAYEF---IKNLPIQPKPG---------VWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +  E    +K   ++  PG         V   ++   SH    K+ +++A++  KLE E 
Sbjct: 635 DVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKE- 693

Query: 757 VGYYISLSNM 766
            G Y+  + +
Sbjct: 694 -GGYVPQTKL 702



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 249/505 (49%), Gaps = 34/505 (6%)

Query: 16  AYSNVSYFESSLALFYETCNK---------------DVVTWNAMITACVENRCVVMGLHF 60
            Y ++ +  +SL   Y  CN                DVV+WN++I+A   N   +  L  
Sbjct: 40  GYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGL 99

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM + G+  ++ TL+  + A    +  K G  +H   +K+  + D  + N  V M+ +
Sbjct: 100 FREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVR 159

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  +   D ++WN++++G   N    + L +F  +  +  + D VSL S 
Sbjct: 160 FGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISI 219

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AAS  LG L  GK IHA  +K  + DS  + + N+LI MYS+C  +  A   F  M  K
Sbjct: 220 LAASGRLGYLLNGKEIHAYAMK-NWLDSN-LRIGNTLIDMYSKCCCVAYAGLVFDKMINK 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SW  +I  +A N    EA  LL ++Q  + ++ D   + + +  C+    L   + V
Sbjct: 278 DLISWTTVIAAYAQNNCHTEALKLLRKVQ-TKGMDVDTMMIGSTLLACSGLRCLSHAKEV 336

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HGY ++R L  DL+M N ++D Y+   +++ A  +F +I    D+VSW SMIS     GL
Sbjct: 337 HGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESI-KCKDVVSWTSMISCYVHNGL 394

Query: 356 FKEML---YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             E L   YL  + S      TL++IL +  S  +L  GK IH +  + GF      VN+
Sbjct: 395 ANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNS 454

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  A+ +    + +     W  +I A   +G  + A++ F S+ + Q   
Sbjct: 455 LVDMYACCGSLENAYKVFI-CTRSKSLVLWTTMINAYGMHGRGKAAVELF-SIMEDQKLI 512

Query: 469 PDSVTLVNVISACGNLELAFEGKSL 493
           PD +T + ++ AC +  L  EGK L
Sbjct: 513 PDHITFLALLYACSHSGLINEGKRL 537



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 155/296 (52%), Gaps = 4/296 (1%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           ++L    +L+  YS       +  +F +  NKD+++W  +I A  +N C    L    ++
Sbjct: 246 SNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKV 305

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             +G+  D+  +   + A + + CL   + VH  ++K G+ +D  + N+ +++YA CG++
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNI 364

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           N +   F  + C D VSW +++S  +HN    + L  F  M  +  + D+++L S ++A+
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L  L+ GK IH    + G+      S  NSL+ MY+ CG +E A + F     K +V 
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEG--STVNSLVDMYACCGSLENAYKVFICTRSKSLVL 482

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           W  +I+ + ++G+ + A +L   M+  + + PD  T + L+  C+ S L+ EG+ +
Sbjct: 483 WTTMINAYGMHGRGKAAVELFSIMEDQKLI-PDHITFLALLYACSHSGLINEGKRL 537



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 2/230 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG L+ L     ++  Y++      +  +F     KDVV+W +MI+  V N      L  
Sbjct: 343 RG-LSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGV 401

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E  +  DS TL+ I+SA   ++ L +G+ +H    + G + + S  N  V+MYA 
Sbjct: 402 FYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYAC 461

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L ++   F        V W T+++    +   +  +  F  M       D+++  + 
Sbjct: 462 CGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLAL 521

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           + A +  G ++ GK +    +K  Y+  P+      L+ +  +   +E A
Sbjct: 522 LYACSHSGLINEGKRLLET-MKCKYQLEPWPEHYACLVDLLGRANHLEEA 570


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 206/693 (29%), Positives = 347/693 (50%), Gaps = 59/693 (8%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  YA  GD+  ++  F  M   D VSWN+++SG LHN    K +  F +MG
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMG 166

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  + +  + + + L +   G  IH L +K+G++    V   ++L+ MY++C  
Sbjct: 167 RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCD--VVTGSALLDMYAKCKK 224

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           ++ + + F  M  K+ VSW+AII G   N       +L  EMQ    V    +T  ++  
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ-KAGVGVSQSTFASVFR 283

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            CA    LR G  +HG+A++   G D+++  + +D Y K N+LS A+ LFN++ P ++L 
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL-PNHNLQ 342

Query: 347 SWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           S+N++I G  +    L       +L     +C   +    G  +H   +K    +N    
Sbjct: 343 SYNAIIVGYARSDKGL--GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 400

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NA++ MY  CG LV A  + + +  + D   WN +I A  QNG+ ++ +  F        
Sbjct: 401 NAILDMYGKCGALVEACLVFEEMV-SRDAVSWNAIIAAHEQNGNEEKTLSLF-------- 451

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
                                     +H   +KS +GLD+ V  ALI MY +C  ++ A 
Sbjct: 452 --------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 485

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEF--EPNEISIVSILSACTQLG 583
            + +      + +WN +IS FS  K    A + F + LE   +P+  +  +IL  C  L 
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            +  GKQIH  +     Q +++ISS L+DMYS C               +    W++M+ 
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 605

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y  HG G EA+++F  M    ++P  ++ +++L AC H GLV++GL Y+++ML  Y + 
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 665

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P+ EH+ C+VD++GRSG++ +A E I+ +P +    +W  +LS C  HG+ ++ ++ A  
Sbjct: 666 PQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYS 725

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + +LEPE+   Y+ LSN+Y   G W +  ++ K
Sbjct: 726 ILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRK 758



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/723 (24%), Positives = 326/723 (45%), Gaps = 75/723 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L  Y+       +  LF     +DVV+WN++I+  + N      +  F +M   G  F
Sbjct: 113 AMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVF 172

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +     G  +H L++K G   D    +  ++MYAKC  L+ S   F
Sbjct: 173 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFF 232

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW+ I++GC+ N+     L  F+EM  +G      + +S   + A L  L 
Sbjct: 233 HSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALR 292

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   +K  +     V +  + + MY +C ++  A++ F  +   ++ S+NAII G
Sbjct: 293 LGSQLHGHALKTDFGTD--VVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVG 350

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A + K                +  D  ++      CA      EG  VHG +++ L   
Sbjct: 351 YARSDK---------------GLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQS 395

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
           ++ + N+++D Y K  +L +A L+F  +    D VSWN++I+                  
Sbjct: 396 NICVANAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIA------------------ 436

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            A   + N  ++L         + +LG  ++ +G+ AL+ MY  CG +  A  L  R++ 
Sbjct: 437 -AHEQNGNEEKTLSLFIHNRIIKSRLGL-DSFVGI-ALIDMYSKCGMMEKAEKLHDRLAE 493

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
            +  S WN +I   +     +EA KTF  M  +    PD+ T   ++  C NL     GK
Sbjct: 494 QTVVS-WNAIISGFSLQKQSEEAQKTFSKML-EMGVDPDNFTYATILDTCANLVTVELGK 551

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +H   +K  +  D  + + L+ MY +C +++    +FE   N +  TWN M+  ++Q+ 
Sbjct: 552 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 611

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL++F +++ E   PN  + +++L AC  +G++  G     H FH           
Sbjct: 612 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL----HYFH----------- 656

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSAC 665
           ++L  Y        +S ++   G  G+  +A+EL   M      P ++  +   +LLS C
Sbjct: 657 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM------PFEADAVIWRTLLSIC 710

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNLP---IQP 721
              G V+   +   ++L+   + PE +  +V + ++   +G   E  +  K +    ++ 
Sbjct: 711 KIHGNVEVAEKAAYSILQ---LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKK 767

Query: 722 KPG 724
           +PG
Sbjct: 768 EPG 770



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 266/593 (44%), Gaps = 72/593 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   + T ++LL  Y+     + S+  F+    K+ V+W+A+I  CV+N  +  GL  F
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM + G+    +T   +  +   ++ L+ G  +H  ++K     D  +    ++MY KC
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L+ ++  F+ +   +  S+N I+ G   ++               G   D VSLS A 
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KGLGLDEVSLSGAF 369

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +     G  +H L +K   + +  + V N+++ MY +CG +  A   F  M  +D
Sbjct: 370 RACAVIKGDLEGLQVHGLSMKSLCQSN--ICVANAILDMYGKCGALVEACLVFEEMVSRD 427

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNAII     NG  E+   L                                   +H
Sbjct: 428 AVSWNAIIAAHEQNGNEEKTLSLF----------------------------------IH 453

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
              I+  LG D  +  +L+D YSK   + KAE L + +A    +VSWN++ISG   +   
Sbjct: 454 NRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT-VVSWNAIISGFSLQKQS 512

Query: 362 LCSQFSFSTLL------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             +Q +FS +L             IL +C +  ++E GK IH   +K    ++    + L
Sbjct: 513 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 572

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++   F L+   + N D   WN ++    Q+G  +EA+K F+ M Q +N  P
Sbjct: 573 VDMYSKCGNM-QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM-QLENVKP 630

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           +  T + V+ ACG++ L  +G  LH   ++ S  GLD ++++   ++ + GR   +  A 
Sbjct: 631 NHATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKAL 688

Query: 527 TVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
            + E   +  +   W  ++S        EV     +  L+ EP + +   +LS
Sbjct: 689 ELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 741



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 156/623 (25%), Positives = 267/623 (42%), Gaps = 113/623 (18%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI---- 248
           GK  HA  I   ++  P V VTN LI MY +C D+E A + F GM  +D VSWNA+    
Sbjct: 61  GKQAHARMILTEFK--PTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGY 118

Query: 249 ---------------------------IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
                                      I G+  NG   +  D+  +M  M +V  D  T 
Sbjct: 119 AGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVF-DRTTF 177

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
             ++  C+       G  +HG A++     D++  ++L+D Y+K   L  +   F+++ P
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM-P 236

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
             + VSW+++I+G            LFKEM       S ST  ++  SC    +L  G  
Sbjct: 237 EKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQ 296

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H   LK  F  + +   A + MY+ C +L  A  L   +  N +   +N +IV   ++ 
Sbjct: 297 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLP-NHNLQSYNAIIVGYARS- 354

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
                          +    D V+L     AC  ++   EG  +HGL++KSL   +  V 
Sbjct: 355 --------------DKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 400

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
           NA++ MYG+C  +  A  VFE   + +  +WN +I+A  QN  E + L LF         
Sbjct: 401 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF--------- 451

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
                                IH  +       +SF+  AL+DMYS C            
Sbjct: 452 ---------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDR 490

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              ++  +W+++IS +    +  EA + F +M   G+ P   +  ++L  C++   V+ G
Sbjct: 491 LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 550

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            Q +  ++++ +++ +      +VDM  + G +Q+     +  P +     W AM+   +
Sbjct: 551 KQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV-TWNAMVCGYA 608

Query: 735 HHGDTKMGKQVAELLFKLEPENV 757
            HG   +G++  ++   ++ ENV
Sbjct: 609 QHG---LGEEALKIFEYMQLENV 628



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 170/418 (40%), Gaps = 45/418 (10%)

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           Y  +     T   I   C+  ++L  GK  H   +   F       N L+ MYI C DL 
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLE 94

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS------------ 468
            AF +   +    DT  WN ++      G    A K F +M ++   S            
Sbjct: 95  FAFKVFDGMPQR-DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNG 153

Query: 469 ------------------PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
                              D  T   V+ +C +LE    G  +HGLA+K     D    +
Sbjct: 154 DHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGS 213

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           AL+ MY +C+ +  +   F S    N  +W+ +I+   QN      LELF+ ++      
Sbjct: 214 ALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGV 273

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
           ++ +  S+  +C  L  LR G Q+HGH     F  +  I +A LDMY  C + +    + 
Sbjct: 274 SQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLF 333

Query: 628 SAYGYHG-KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           ++   H  + + AI + +   + G+   + S+     AC+      EGLQ +        
Sbjct: 334 NSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHG-----LS 388

Query: 687 VRPETEHHVC----IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           ++   + ++C    I+DM G+ G L EA    + + +      W A+++A   +G+ +
Sbjct: 389 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 445


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 203/720 (28%), Positives = 352/720 (48%), Gaps = 66/720 (9%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  +I  G+  D  + N+ +++Y+K G +  +   F  +   D VSW  ++SG   N  
Sbjct: 64  IHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +R+M  +G       LSS +++       + G+ +HA G K G+    +V   
Sbjct: 124 GEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG-- 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LI++Y +CG    AER F+ M  +D V++N +I G A     E A ++  EMQ    +
Sbjct: 182 NALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQ-SSGL 240

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  T+ +L++ CA    L++G  +H Y  +  +  D +M  SL+D Y K   +  A +
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300

Query: 335 LFNAIAPMNDLVSWN------SMISGLFKEMLYLC---------SQFSFSTLLAILPSCN 379
           +FN +    ++V WN        I+ L K     C         +QF++     IL +C 
Sbjct: 301 IFN-LGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYP---CILRTCT 356

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               ++ G+ IH   +K GF ++      L+ MY   G L  A  +L+ +    D   W 
Sbjct: 357 CTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWT 415

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    Q+ + ++A+  FK M Q+    PD++ L + IS C  ++   +G  +H     
Sbjct: 416 SMIAGYVQHEYCKDALAAFKEM-QKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYV 474

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    D  + NAL+ +Y RC  I+ A + FE   + +  TWN ++S F+Q+     AL++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  ++    + N  + VS LSA   L  ++ GKQIH  V   G    + + +AL+ +Y  
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+++I++   HG+G EA++ F +M               
Sbjct: 595 CGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK------------- 641

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
                      EGL Y+ +M ++Y +RP  +H+ C++D+ GR+G+L  A +F++ +PI  
Sbjct: 642 -----------EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAA 690

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW  +LSAC  H + ++G+  A+ L +LEP +   Y+ LSN Y   G+W +  ++ K
Sbjct: 691 DAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRK 750



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/578 (29%), Positives = 269/578 (46%), Gaps = 18/578 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG          L+  YS       +  +F E   +D V+W AM++   +N      L  
Sbjct: 71  RGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWL 130

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M   G+      L  ++S+ T+     QGR VH    K G  +++ + N  + +Y +
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLR 190

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG    +E  F  M   DTV++NT++SG     + E  L  F EM  SG   D V++SS 
Sbjct: 191 CGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSL 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A LG+L  G  +H+   K G   S Y+ +  SL+ +Y +CGD+E A   F      
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGM-SSDYI-MEGSLLDLYVKCGDVETALVIFNLGNRT 308

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN I+  F       ++F+L  +MQ    + P+  T   ++  C  +  +  G  +
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQTA-GIRPNQFTYPCILRTCTCTGEIDLGEQI 367

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +++     D+ +   L+D YSK   L KA  +   +    D+VSW SMI+G      
Sbjct: 368 HSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQHEY 426

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  FKEM           L + +  C   +++  G  IH      G+S +    NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNA 486

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+++Y  CG +  AFS  + I H  D   WN ++    Q+G  +EA+K F  M  Q    
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEEALKVFMRM-DQSGVK 544

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            +  T V+ +SA  NL    +GK +H   +K+    +T V NALI++YG+C   + A   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
           F      N  +WN +I++ SQ+   + AL+ F  ++ E
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKE 642



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 13/287 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +    +L+  Y+       + + F E  +KD +TWN +++   ++      L  F
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G++ +  T +  +SA   +  +KQG+ +H   IK G   ++ + N  +++Y KC
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-----EQADNVS 176
           G    ++  FS M   + VSWNTI++ C  +    + L +F +M   G       +D   
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSYFKSMSDKYG 655

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERA 233
           +       AC+ ++ +G+       K   E+ P  +   V  +L+S      +IE  E A
Sbjct: 656 IRPRPDHYACVIDI-FGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELA 714

Query: 234 ---FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
                 +   D  S+  + + +A+ GK+    D + +M   R V  +
Sbjct: 715 AKHLLELEPHDSASYVLLSNAYAVTGKWANR-DQVRKMMRDRGVRKE 760



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 48/210 (22%)

Query: 590 QIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHG 634
           +IH      G  ++  + + L+D+YS               + + N +W +M+S Y  +G
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY---------------N 679
            G EA+ L+ +M  +G+ PT   + S+LS+C+ + L  +G   +               N
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 680 NMLEEY----------DVRPETEHHVCIVDMLGRSGKLQ--------EAYEFIKNLPIQP 721
            ++  Y           V  +  H   +      SG  Q        E +E +++  + P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
                 ++L+AC+  GD + G Q+   LFK
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFK 272


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 203/653 (31%), Positives = 344/653 (52%), Gaps = 48/653 (7%)

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGD 226
            G   D  +L  A+   +C G+   G+ +HA+  KLG  D  P+V   NSL+SMY +CG 
Sbjct: 61  DGVAPDRFTLPPAL--KSCRGD--DGRQVHAVAAKLGLADGDPFVG--NSLVSMYGRCGR 114

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF-DLLHEMQLMRSVEPDIATVVTLI 285
           ++ AE+ F GM  +++VSWNA++   A   +  E F D L +  L  +  PD AT+VT++
Sbjct: 115 VDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLED--LGGTAAPDEATLVTVL 172

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM--N 343
            +CA       GR+VHG A++        + N L+D Y+K   ++ AE  F    P    
Sbjct: 173 PMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGR 232

Query: 344 DLVSWNSMISG------------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKS 389
           ++VSWN M+ G            L +EM            T+L++LP C+    L   + 
Sbjct: 233 NVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRE 292

Query: 390 IHCWQLKLGFS-NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           +H + ++ G      +  NAL+  Y  CG L+ A  +   I      S WN +I A  QN
Sbjct: 293 LHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKM-VSSWNALIGAHAQN 351

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G    AI+ F+ MT      PD  ++ +++ ACGNL+    GK+ HG  L++ +  D+ +
Sbjct: 352 GEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFI 411

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-- 566
           + +L+++Y +C     A  +F++    +  +WN MI+ +SQN     +L+LFR ++ +  
Sbjct: 412 RVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKG 471

Query: 567 ---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              P+ ++  S L AC++L  +R GK++H         E+SF+SS+++DMYS C      
Sbjct: 472 GHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDA 531

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K   +W+ MI+ Y  +G+G EA+ L+ +M   G+ P   + + LL AC H+
Sbjct: 532 RVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHA 591

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           G++++GL ++  M     +  + EH+ C++ ML R+G+  +A   ++ +P +P   +  +
Sbjct: 592 GMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSS 651

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +LSAC  HG+ ++GK+VA+ L +LEP    +Y+  SNMY    +W +  ++ K
Sbjct: 652 VLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRK 704



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 183/670 (27%), Positives = 317/670 (47%), Gaps = 70/670 (10%)

Query: 91  QGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
            GR VH ++ K G+   D  + N  V+MY +CG ++ +E  F GM   + VSWN +M+  
Sbjct: 81  DGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV 140

Query: 150 LHNNYPEKCLLYFR----EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
                P + L  FR    ++G +    D  +L + +   A L     G+ +H L +K G+
Sbjct: 141 AD---PRRGLELFRDCLEDLGGTA-APDEATLVTVLPMCAALAWPETGRAVHGLAVKSGW 196

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC---KDVVSWNAIIDGFALNGKFEEAF 262
           + +P VS  N L+ MY++CG++  AE AF        ++VVSWN ++ G+A NG+   AF
Sbjct: 197 DAAPRVS--NVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAF 254

Query: 263 DLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM-NSLM 320
            LL EMQ+  R V  D  T+++++ +C+    L + R +H + +RR L     M+ N+L+
Sbjct: 255 GLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALI 314

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ--- 365
             Y +   L  A  +F+ I     + SWN++I              LF+EM   C Q   
Sbjct: 315 AAYGRCGCLLHACRVFDGICS-KMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPD 373

Query: 366 -FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
            FS  +LL    +C + + L  GK+ H + L+ G   ++    +L+ +YI CG    A  
Sbjct: 374 WFSIGSLLL---ACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARV 430

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS-PDSVTLVNVISACGN 483
           L   +    + S WN +I   +QNG   E+++ F+ M  ++    P  +   + + AC  
Sbjct: 431 LFDAVEEKDEVS-WNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSE 489

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     GK +H  ALK+ +  D+ + +++I MY +C  +  A   F+     +  +W  M
Sbjct: 490 LPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVM 549

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I+ ++ N     A+ L+  +     EP+  + + +L AC   G+L  G           F
Sbjct: 550 ITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCF--------F 601

Query: 601 QENSFISS--ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           QE   +    A L+ Y         + +I      G+  +A+ L   M      P    +
Sbjct: 602 QEMRNLPKIEAKLEHY---------ACVIGMLSRAGRFADAVALMEVMPEE---PDAKIL 649

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRS---GKLQEAYEFI 714
            S+LSAC   G V+ G +  + +LE   + P + EH+V   +M   S    ++++  + +
Sbjct: 650 SSVLSACHMHGEVELGKKVADKLLE---LEPHKAEHYVLASNMYAGSRQWDEMRKVRKML 706

Query: 715 KNLPIQPKPG 724
           ++  +  +PG
Sbjct: 707 RDAGVAKEPG 716



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 275/612 (44%), Gaps = 59/612 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE- 67
              SL++ Y      + +  +F     +++V+WNA++ A  + R    GL  F + +E+ 
Sbjct: 101 VGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR---RGLELFRDCLEDL 157

Query: 68  --GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
                 D  TL+ ++     +   + GR VH L++K+G  A   + NV V+MYAKCG++ 
Sbjct: 158 GGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMA 217

Query: 126 SSECTF---SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS--GEQADNVSLSSA 180
            +EC F         + VSWN ++ G   N          REM     G  AD +++ S 
Sbjct: 218 DAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSV 277

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   + L EL+  + +HA  ++ G   +  + V N+LI+ Y +CG +  A R F G+  K
Sbjct: 278 LPVCSGLPELAKLRELHAFVVRRGLHLTGDM-VPNALIAAYGRCGCLLHACRVFDGICSK 336

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            V SWNA+I   A NG+   A +L  EM      +PD  ++ +L+  C +   L  G++ 
Sbjct: 337 MVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAA 396

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG+ +R  L  D  +  SL+  Y +    S A +LF+A+    D VSWN+MI+G      
Sbjct: 397 HGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEE-KDEVSWNTMIAGYSQNGL 455

Query: 355 ------LFKEMLYLCSQFSFSTLLAI--LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 LF+EM         S L A   L +C+   ++  GK +HC+ LK     ++   
Sbjct: 456 PGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLS 515

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           ++++ MY  CG +  A     R+    D   W ++I     NG  +EA+  +  M  ++ 
Sbjct: 516 SSIIDMYSKCGSVDDARVFFDRLK-AKDAVSWTVMITGYAVNGRGKEAVGLYDKMG-REG 573

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD  T + ++ ACG+  +  +G                      +  +   R++    
Sbjct: 574 MEPDGFTYLGLLMACGHAGMLEDG----------------------LCFFQEMRNLPKIE 611

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
              E         + C+I   S+      A+ L   +  EP+   + S+LSAC   G + 
Sbjct: 612 AKLEH--------YACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVE 663

Query: 587 HGKQIHGHVFHL 598
            GK++   +  L
Sbjct: 664 LGKKVADKLLEL 675


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 213/692 (30%), Positives = 356/692 (51%), Gaps = 41/692 (5%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            +  YA+ G + SS   F      D+  W  ++   + ++  E+ +L + +M  +  Q  
Sbjct: 39  LIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEAQIT 98

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +    S + A A  G++  G  +H   IK G+++ P++    SL+ +Y + G +  A + 
Sbjct: 99  SFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIE--TSLLGLYGELGCLTDARKV 156

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  +D+VSW++II  +   G+  EA ++   + +   V+ D   ++++   C+   +
Sbjct: 157 FDDIPVRDLVSWSSIISSYVDKGEANEALEMFR-LLVNERVKLDWVIMLSVTEACSKLGI 215

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI- 352
           L+  +S+HGY +RR +     + NSL++ YS  + L  AE +F  +A     +SW SMI 
Sbjct: 216 LKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMAN-KTFISWTSMIY 274

Query: 353 ----SGLFKE-------MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--F 399
               SG FKE       ML L  + +  T++ +L SC+    L  GK IHC+ LK G  F
Sbjct: 275 CYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTF 334

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            ++ +G   L+ +Y  CG L     +L  I   +  S WN ++    + G F+EA+  F 
Sbjct: 335 QDDCLG-PVLIELYAGCGKLGYCEKVLLAIGERNVVS-WNTLLSINARQGLFEEALVLFV 392

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M Q++    D  +L + ISACGN+     G+ +HG A+K  + L   V+NALI MY RC
Sbjct: 393 QM-QKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFVKNALIGMYSRC 450

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA- 578
               SA  +F      +   WN +IS F Q+   + A+ L   +     +I+ V  LSA 
Sbjct: 451 GFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAI 510

Query: 579 --CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
             C  +  L  GK +H  +   G +++ +I +AL DMY+ C               KS  
Sbjct: 511 QACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVV 570

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +WS+MIS YG HG+   AI  F++M   GI+P   + +++LSACSHSG V++G ++Y ++
Sbjct: 571 SWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQG-KFYFDL 629

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           + ++ V P +EH  C+VD+L R+G +  AY+ I ++P      V G +L+ C  H    M
Sbjct: 630 MRDFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMDM 689

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
             ++ + L K+   + G+Y  LSN+Y  +G W
Sbjct: 690 IPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNW 721



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 173/624 (27%), Positives = 294/624 (47%), Gaps = 23/624 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ST L+ +Y+ +   +SS  +F    N D   W  +I   V +      +  + +M+   
Sbjct: 35  ASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNE 94

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            +  S     ++ A      +  G  VH   IK G   D  +    + +Y + G L  + 
Sbjct: 95  AQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDAR 154

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D VSW++I+S  +      + L  FR +     + D V + S   A + LG
Sbjct: 155 KVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLG 214

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L   K IH   ++   +     ++ NSLI MYS C D+ +AER F  M  K  +SW ++
Sbjct: 215 ILKLAKSIHGYIVRRRVDTCE--ALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSM 272

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +  +G F+EAF++  +M L   VEP++ T++ ++  C+    LREG+ +H YA+++ 
Sbjct: 273 IYCYNRSGWFKEAFEIFVKM-LELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKG 331

Query: 309 LGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
           + + D  +   L++ Y+    L   E +  AI   N +VSWN+++S     GLF+E L L
Sbjct: 332 MTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERN-VVSWNTLLSINARQGLFEEALVL 390

Query: 363 CSQ-------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
             Q         F +L + + +C +  SL+ G+ IH + +K       +  NAL+ MY  
Sbjct: 391 FVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEFVK-NALIGMYSR 449

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG   +A+ +   I   S  + WN +I    Q+G+  EAI     M        D V  +
Sbjct: 450 CGFSDSAYMIFNDIKQKSSVA-WNSIISGFVQSGNSIEAIHLVDQMYLNCLKITD-VVFL 507

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           + I AC ++    +GK LH   +   +  D  ++ AL  MY +C D+++A  VF S    
Sbjct: 508 SAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEK 567

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIH 592
           ++ +W+ MIS +  +     A+  F     L  +PN I+ ++ILSAC+  G +  GK   
Sbjct: 568 SVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYF 627

Query: 593 GHVFHLGFQENSFISSALLDMYSN 616
             +   G + +S   + L+D+ S 
Sbjct: 628 DLMRDFGVEPSSEHFACLVDLLSR 651



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 252/545 (46%), Gaps = 24/545 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       TSLL  Y  +     +  +F +   +D+V+W+++I++ V+       L  F
Sbjct: 129 GFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMF 188

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +V E ++ D   +L +  A +++  LK  + +H   ++  +    +L N  + MY+ C
Sbjct: 189 RLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSC 248

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL S+E  F  M     +SW +++     + + ++    F +M     + + +++   +
Sbjct: 249 DDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVL 308

Query: 182 AASACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + + L  L  GK+IH   +K G  ++D     V   LI +Y+ CG +   E+    +  
Sbjct: 309 KSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPV---LIELYAGCGKLGYCEKVLLAIGE 365

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++VVSWN ++   A  G FEEA  L  +MQ  R +  D  ++ + IS C +   L+ GR 
Sbjct: 366 RNVVSWNTLLSINARQGLFEEALVLFVQMQ-KRGLMLDFFSLSSAISACGNVGSLQLGRQ 424

Query: 300 VHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
           +HGYAI+R +LG    + N+L+  YS+      A ++FN I   +  V+WNS+ISG  + 
Sbjct: 425 IHGYAIKRCILGE--FVKNALIGMYSRCGFSDSAYMIFNDIKQKSS-VAWNSIISGFVQS 481

Query: 358 ----------EMLYL-CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                     + +YL C + +    L+ + +C     LE GK +H   +  G   +    
Sbjct: 482 GNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIE 541

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL  MY  CGDL  A  +   +S  S  S W+ +I     +G    AI  F  M  +  
Sbjct: 542 TALTDMYAKCGDLRTAEGVFHSMSEKSVVS-WSAMISGYGMHGRIDAAITFFNQMV-ELG 599

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             P+ +T +N++SAC +     +GK    L     +   +     L+ +  R  D+  A 
Sbjct: 600 IKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGDVNGAY 659

Query: 527 TVFES 531
            +  S
Sbjct: 660 KIINS 664



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 7/262 (2%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
              +L+  YS   + +S+  +F +   K  V WN++I+  V++   +  +H   +M    
Sbjct: 439 VKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNC 498

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++      L  + A   M CL++G+ +H   I  G+  D  +     +MYAKCGDL ++E
Sbjct: 499 LKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAE 558

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M     VSW+ ++SG   +   +  + +F +M   G + ++++  + ++A +  G
Sbjct: 559 GVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSG 618

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  GK    L    G E  P       L+ + S+ GD+  A +    M        +A 
Sbjct: 619 SVEQGKFYFDLMRDFGVE--PSSEHFACLVDLLSRAGDVNGAYKIINSMP----FPADAS 672

Query: 249 IDGFALNG-KFEEAFDLLHEMQ 269
           + G  LNG +  +  D++ E++
Sbjct: 673 VLGNLLNGCRIHQRMDMIPEIE 694


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 216/725 (29%), Positives = 356/725 (49%), Gaps = 44/725 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G  +H   +K+G +A  SL N  ++ Y+KC     +   F  +     VSW+++++ 
Sbjct: 20  LLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             +N  P   +  F  M   G   +  +L   +    C+ +   G  +HA+ +  G+   
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDAQLGAQVHAMAMATGFGSD 134

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            +V+  N+L++MY   G ++ A R F    + ++ VSWN ++  +  N +  +A  +  E
Sbjct: 135 VFVA--NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   ++P       +++ C  S  +  GR VH   +R     D+   N+L+D Y K  
Sbjct: 193 M-VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 251

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFSTLL-------AIL 375
            +  A ++F  + P +D+VSWN++ISG          + L  Q   S L+       +IL
Sbjct: 252 RVDIASVIFEKM-PDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSIL 310

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C    + + G+ IH + +K    S++ IGV  L+ MY     L  A  +   +SH  D
Sbjct: 311 KACAGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFLDDAMKVFDWMSHR-D 368

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I  C+  G   EA   F  + +++    +  TL  V+ +  +LE A   + +H
Sbjct: 369 LILWNALISGCSHGGRHDEAFSIFYGL-RKEGLGVNRTTLAAVLKSTASLEAASATRQVH 427

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            LA K     D  V N LI  Y +C  +  A  VFE C + ++     MI+A SQ     
Sbjct: 428 ALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGE 487

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A++LF  +     EP+   + S+L+AC  L     GKQ+H H+    F  ++F  +AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
             Y+ C               +   +WS+MI     HG G  A+ELF  M + GI P   
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           ++ S+L AC+H+GLVDE  +Y+N+M E + +    EH+ C++D+LGR+GKL +A E + +
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P Q    VWGA+L A   H D ++GK  AE LF LEPE  G ++ L+N Y + G W + 
Sbjct: 668 MPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEV 727

Query: 777 VEIGK 781
            ++ K
Sbjct: 728 AKVRK 732



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 182/661 (27%), Positives = 307/661 (46%), Gaps = 42/661 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA L     L++ YS       +  +F E  +   V+W++++TA   N      +  F
Sbjct: 34  GFLASL--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAF 91

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+  +   L +++  +      + G  VH +++  G  +D  + N  V MY   
Sbjct: 92  HGMRAEGVCCNEFALPVVLKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGF 148

Query: 122 GDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G ++ +   F       + VSWN +MS  + N+     +  F EM WSG Q      S  
Sbjct: 149 GFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCV 208

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A      +  G+ +HA+ +++GYE   + +  N+L+ MY + G ++ A   F  M   
Sbjct: 209 VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA--NALVDMYVKMGRVDIASVIFEKMPDS 266

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWNA+I G  LNG    A +LL +M+    + P++  + +++  CA +     GR +
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQMK-SSGLVPNVFMLSSILKACAGAGAFDLGRQI 325

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG+ I+     D  +   L+D Y+K++ L  A  +F+ ++   DL+ WN++ISG      
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISGCSHGGR 384

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F  +       + +TL A+L S  S E+    + +H    K+GF  +   VN 
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  Y  C  L  A  + +  S + D      +I A +Q  H + AIK F  M  ++   
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECS-SGDIIAVTSMITALSQCDHGEGAIKLFMEML-RKGLE 502

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD   L ++++AC +L    +GK +H   +K     D    NAL+  Y +C  I+ A   
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELA 562

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F S     + +W+ MI   +Q+    RALELF  +  E   PN I++ S+L AC   G++
Sbjct: 563 FSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLV 622

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
              K+                 +++ +M+   ++   +S MI   G  GK  +A+EL + 
Sbjct: 623 DEAKRYF---------------NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667

Query: 646 M 646
           M
Sbjct: 668 M 668



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 273/588 (46%), Gaps = 30/588 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF + +  + +L+  Y    + + +  +F E    ++ V+WN +++A V+N      +  
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 189

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEMV  GI+        +V+A T    +  GR VH + ++ G   D    N  V+MY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 249

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  M  +D VSWN ++SGC+ N +  + +    +M  SG   +   LSS 
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 309

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A  G    G+ IH   IK   +   Y+ V   L+ MY++   ++ A + F  M+ +
Sbjct: 310 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGV--GLVDMYAKNHFLDDAMKVFDWMSHR 367

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++ WNA+I G +  G+ +EAF + + ++    +  +  T+  ++   A        R V
Sbjct: 368 DLILWNALISGCSHGGRHDEAFSIFYGLR-KEGLGVNRTTLAAVLKSTASLEAASATRQV 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H  A +    +D  ++N L+D Y K + LS A  +F   +   D+++  SMI+       
Sbjct: 427 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS-GDIIAVTSMITALSQCDH 485

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EML    +     L ++L +C S  + E GK +H   +K  F ++    NA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L++ Y  CG   D   AFS L           W+ +I    Q+GH + A++ F  M   +
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLP----ERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DE 600

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
             +P+ +T+ +V+ AC +  L  E K     ++K + G+D   ++   +I + GR   + 
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFN-SMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
            A  +  S  +  N   W  ++ A   +K  E+  L   +    EP +
Sbjct: 660 DAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 707



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 2/158 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F++      +L+  Y+     E +   F     + VV+W+AMI    ++      L  
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FG MV+EGI  +  T+  ++ A      + +  R  + +    G+       +  +++  
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           + G L+ + E   S    A+   W  ++     +  PE
Sbjct: 654 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 691


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 1135

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 215/671 (32%), Positives = 343/671 (51%), Gaps = 71/671 (10%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           DN +  + + A+A + +L  GK IHA   K G+     V+V NSL++MY +CGD+ AA +
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCAD 290
            F  +  +D VSWN++I   A   +FEE    LH  +LM S  V+P   T+V++   C+ 
Sbjct: 389 VFDDIPDRDHVSWNSMI---ATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH 445

Query: 291 SLL-LREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
               +R G+ VH Y +R   L  Y     N+L+  Y++   ++ A+ LF  +    DLVS
Sbjct: 446 VRGGVRLGKQVHAYTLRNGDLRTY---TNNALVTMYARLGRVNDAKALF-GVFDGKDLVS 501

Query: 348 WNSMISGL-----FKEML---YLC----SQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN++IS L     F+E L   YL      +    TL ++LP+C+  E L  G+ IHC+ L
Sbjct: 502 WNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYAL 561

Query: 396 KLG--FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           + G    N+ +G  AL+ MY NC        +   +   +  + WN ++    +N    +
Sbjct: 562 RNGDLIENSFVGT-ALVDMYCNCKQPKKGRLVFDGVVRRT-VAVWNALLAGYARNEFDDQ 619

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A++ F  M  +    P++ T  +V+ AC   ++  + + +HG  +K   G D  VQNAL+
Sbjct: 620 ALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALM 679

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--------- 564
            MY R   ++ + T+F      ++ +WN MI+          AL L   ++         
Sbjct: 680 DMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSD 739

Query: 565 ------------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
                       F+PN ++++++L  C  L  L  GK+IH +        +  + SAL+D
Sbjct: 740 TFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVD 799

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG------I 651
           MY+ C               ++   W+ +I AYG HGKG EA+ELF  M   G      I
Sbjct: 800 MYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVI 859

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           RP + + I++ +ACSHSG+VDEGL  ++ M   + V P  +H+ C+VD+LGRSG+++EAY
Sbjct: 860 RPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAY 919

Query: 712 EFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           E I  +P    K   W ++L AC  H   + G+  A+ LF LEP    +Y+ +SN+Y + 
Sbjct: 920 ELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSA 979

Query: 771 GRWKDAVEIGK 781
           G W  A+ + K
Sbjct: 980 GLWDQALGVRK 990



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 193/691 (27%), Positives = 313/691 (45%), Gaps = 91/691 (13%)

Query: 72   DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAKCGDLNSSEC 129
            D+     ++ A   ++ L  G+ +H    K G    SS+   N  VNMY KCGDL ++  
Sbjct: 329  DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC--- 186
             F  +   D VSWN++++        E  L  FR M    E  D  S +    A AC   
Sbjct: 389  VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLM--LSENVDPTSFTLVSVAHACSHV 446

Query: 187  LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
             G +  GK +HA  ++ G          N+L++MY++ G +  A+  F     KD+VSWN
Sbjct: 447  RGGVRLGKQVHAYTLRNG---DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWN 503

Query: 247  AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
             +I   + N +FEEA   ++ M ++  V PD  T+ +++  C+    LR GR +H YA+R
Sbjct: 504  TVISSLSQNDRFEEALMYVYLM-IVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALR 562

Query: 307  R-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
               L  +  +  +L+D Y       K  L+F+ +     +  WN++++G           
Sbjct: 563  NGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV-RRTVAVWNALLAGYARNEFDDQAL 621

Query: 355  -LFKEMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
             LF EM+   S+F  + +T  ++LP+C   +     + IH + +K GF  +    NALM 
Sbjct: 622  RLFVEMISE-SEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMD 680

Query: 412  MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--- 468
            MY   G +  + ++  R++   D   WN +I  C   G + +A+     M ++Q      
Sbjct: 681  MYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSD 739

Query: 469  --------------PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
                          P+SVTL+ V+  C  L    +GK +H  A+K  + +D  V +AL+ 
Sbjct: 740  TFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVD 799

Query: 515  MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---------F 565
            MY +C  +  AS VF+     N+ TWN +I A+  +     ALELFR +           
Sbjct: 800  MYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVI 859

Query: 566  EPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-----GFQENSFISSALLD-------- 612
             PNE++ ++I +AC+  G++  G     H+FH      G +      + L+D        
Sbjct: 860  RPNEVTYIAIFAACSHSGMVDEGL----HLFHTMKASHGVEPRGDHYACLVDLLGRSGRV 915

Query: 613  ---------MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG---IRPTKSSVIS 660
                     M SN     AWSS++ A   H    +++E F E+       + P  +S   
Sbjct: 916  KEAYELINTMPSNLNKVDAWSSLLGACRIH----QSVE-FGEIAAKHLFVLEPNVASHYV 970

Query: 661  LLSAC-SHSGLVDEGLQYYNNMLEEYDVRPE 690
            L+S   S +GL D+ L     M +E  VR E
Sbjct: 971  LMSNIYSSAGLWDQALGVRKKM-KEMGVRKE 1000



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 288/625 (46%), Gaps = 61/625 (9%)

Query: 4   LAHLPTST-----SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
             H P S+     SL+  Y       ++  +F +  ++D V+WN+MI          + L
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           H F  M+ E +   S TL+ +  A + +   ++ G+ VH  +++ G +  +   N  V M
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR-TYTNNALVTM 477

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+ G +N ++  F      D VSWNT++S    N+  E+ L+Y   M   G + D V+L
Sbjct: 478 YARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTL 537

Query: 178 SSAVAASACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +S + A + L  L  G+ IH   ++ G   E+S    V  +L+ MY  C   +     F 
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRNGDLIENS---FVGTALVDMYCNCKQPKKGRLVFD 594

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           G+  + V  WNA++ G+A N   ++A  L  EM       P+  T  +++  C    +  
Sbjct: 595 GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFS 654

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
           +   +HGY ++R  G D  + N+LMD YS+   +  ++ +F  +    D+VSWN+MI+  
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGC 713

Query: 354 ---GLFKEMLYLCSQFSFS-------------------------TLLAILPSCNSPESLE 385
              G + + L L  +                             TL+ +LP C +  +L 
Sbjct: 714 IVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALG 773

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK IH + +K   + +    +AL+ MY  CG L  A  +  ++    +   WN++I+A 
Sbjct: 774 KGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLIMAY 832

Query: 446 TQNGHFQEAIKTFKSMT-----QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
             +G  +EA++ F+ MT      ++   P+ VT + + +AC +  +  EG  L    +K+
Sbjct: 833 GMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFH-TMKA 891

Query: 501 LMGLDTRVQN--ALITMYGRCRDIKSASTVFESCY-NCN-LCTWNCMISAFSQNKA---- 552
             G++ R  +   L+ + GR   +K A  +  +   N N +  W+ ++ A   +++    
Sbjct: 892 SHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFG 951

Query: 553 EVRALELFRHLEFEPNEISIVSILS 577
           E+ A  LF     EPN  S   ++S
Sbjct: 952 EIAAKHLF---VLEPNVASHYVLMS 973



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 242/515 (46%), Gaps = 45/515 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+ +L+T Y+ +     + ALF     KD+V+WN +I++  +N      L +   M+ +G
Sbjct: 470 TNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG 529

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSS 127
           +R D  TL  ++ A +Q+  L+ GR +HC +++ G +I +S +    V+MY  C      
Sbjct: 530 VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKG 589

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASAC 186
              F G+       WN +++G   N + ++ L  F EM    E   N  + +S + A   
Sbjct: 590 RLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVR 649

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
               S  + IH   +K G+    YV   N+L+ MYS+ G +E ++  F  M  +D+VSWN
Sbjct: 650 CKVFSDKEGIHGYIVKRGFGKDKYVQ--NALMDMYSRMGRVEISKTIFGRMNKRDIVSWN 707

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMR-----------------SVEPDIATVVTLISLCA 289
            +I G  + G++++A +LLHEMQ  +                   +P+  T++T++  CA
Sbjct: 708 TMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCA 767

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
               L +G+ +H YA+++ L  D+ + ++L+D Y+K   L+ A  +F+ + P+ ++++WN
Sbjct: 768 ALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQM-PIRNVITWN 826

Query: 350 SMI-----SGLFKEMLYLCSQFSFS-------------TLLAILPSCNSPESLEFGKSI- 390
            +I      G  +E L L    +               T +AI  +C+    ++ G  + 
Sbjct: 827 VLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLF 886

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACT--Q 447
           H  +   G          L+ +    G +  A+ L+  +  N +    W+ ++ AC   Q
Sbjct: 887 HTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQ 946

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           +  F E I        + N +   V + N+ S+ G
Sbjct: 947 SVEFGE-IAAKHLFVLEPNVASHYVLMSNIYSSAG 980



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 18/214 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV----------- 49
           RGF        +L+  YS +   E S  +F     +D+V+WN MIT C+           
Sbjct: 666 RGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNL 725

Query: 50  ----ENRCVVMGLHFFGEMVEEG---IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA 102
               + R    G   F +  ++G    + +S TL+ ++     +  L +G+ +H  ++K 
Sbjct: 726 LHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ 785

Query: 103 GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF 162
            +  D ++ +  V+MYAKCG LN +   F  M   + ++WN ++     +   E+ L  F
Sbjct: 786 KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELF 845

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
           R M   G     V   + V   A     S+  ++
Sbjct: 846 RIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMV 879


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 225/722 (31%), Positives = 372/722 (51%), Gaps = 42/722 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           VH L++ +G+     +    V+ Y+  G    +   FS     D   WN+++      + 
Sbjct: 31  VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY--EDSPYVS 212
               L   R M  S  +    ++  A +A+A LG L  G  +HA  ++ G    D   V+
Sbjct: 91  FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVA 150

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V +SL+ MY++CG +  A + F  M  +DVV+W A++ G   NG+  +    L EM  + 
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLA 210

Query: 273 ---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
                 P+  T+ + +  C     L  GR +HGYA++  +G   +++++L   YSK +S 
Sbjct: 211 GDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHST 270

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA--ILPSC---- 378
             A  LF  + P  D+VSW S+I      GL +E + L  +   S L    +L SC    
Sbjct: 271 EDACSLFPEL-PEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329

Query: 379 -NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
             +  ++  GK+ H   +K  F +N +  NAL+ MY    +LV     + R+ H  D   
Sbjct: 330 LGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKF-ELVDNAGRVFRLLHQRDADS 388

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHG 495
           WN++IV   + G   + ++ ++ M  +       D+ +LV+ IS+C  L     G+S H 
Sbjct: 389 WNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHC 448

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEV 554
            ++K  +  D+ V N LI MYGRC     A  +F  +    ++ TWN +IS+++      
Sbjct: 449 YSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSN 508

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+ L+  +  E   PN  ++++++SAC  L  L  G++IH +V  +G+  +  I++AL+
Sbjct: 509 TAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALI 568

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C                   AW+ MIS YG HG+  +A+ELF +M    I+P   
Sbjct: 569 DMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGV 628

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + +++LSAC HSGL++EG Q +  M  +Y + P  +H+ C+VD+LG+SG LQEA + +  
Sbjct: 629 TFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 687

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P++P  G+WG +LSAC  H D +MG ++A+  F  + EN GYYI +SN Y +  +W D 
Sbjct: 688 MPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKW-DE 746

Query: 777 VE 778
           +E
Sbjct: 747 IE 748



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 173/667 (25%), Positives = 298/667 (44%), Gaps = 76/667 (11%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV- 65
           +   +SL+  Y+       ++ LF E   +DVV W A+++ CV N     GL +  EMV 
Sbjct: 149 VAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVR 208

Query: 66  ---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
              +   R +S T+   + A   ++ L  GR +H  ++K G+     + +   +MY+KC 
Sbjct: 209 LAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCH 268

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  +   D VSW +++          + +  F+EM  SG Q D+V +S  ++
Sbjct: 269 STEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLS 328

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
                G +  GK  HA+ +K  + D+  V V N+LISMY +   ++ A R F  +  +D 
Sbjct: 329 GLGNSGNVHGGKAFHAVIMKRNFGDN--VLVGNALISMYGKFELVDNAGRVFRLLHQRDA 386

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSV 300
            SWN +I G+   G   +  +L  EMQ   + E   D  ++V+ IS C+  + LR GRS 
Sbjct: 387 DSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSA 446

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
           H Y+I+  L  D  + N L+  Y +      A  +F       D+V+WN++IS       
Sbjct: 447 HCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGH 506

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 L+ +ML      + +TL+ ++ +C +  +LE G+ IH +  ++G+  +     A
Sbjct: 507 SNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTA 566

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  A  +   +  + D   WN++I     +G  ++A++ F  M +  +  
Sbjct: 567 LIDMYAKCGQLGTARRIFDSMLQH-DVVAWNVMISGYGMHGEAKQALELFGKM-EGGSIK 624

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+ VT + ++SAC +  L  EG+                    L T  G+          
Sbjct: 625 PNGVTFLAILSACCHSGLLEEGRQ-------------------LFTRMGK---------- 655

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                  NL  + CM+    ++     A ++   +  EP+     ++LSAC         
Sbjct: 656 --YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSAC--------- 704

Query: 589 KQIHGHVFHLGFQ--ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE- 645
            ++H   F +G +  + +F S A  + Y    SN        +YG   K W+ IE   E 
Sbjct: 705 -KLHDD-FEMGLRIAKKAFASDAENEGYYILISN--------SYG-SAKKWDEIEKLREA 753

Query: 646 MCNSGIR 652
           M N G++
Sbjct: 754 MKNHGVQ 760



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 9/358 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F  ++    +L++ Y      +++  +F     +D  +WN MI    +  C V  L  
Sbjct: 349 RNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLEL 408

Query: 61  FGEM-VEEGIRF--DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           + EM   +   F  D+ +L+  +S+ +++  L+ GR  HC SIK  +  DSS+ NV + M
Sbjct: 409 YREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGM 468

Query: 118 YAKCGDLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           Y +CG  + + C   G+     D V+WNT++S   H  +    +  + +M   G   ++ 
Sbjct: 469 YGRCGKFDHA-CKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNST 527

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L + ++A A L  L  G+ IH+   ++G++    VS+  +LI MY++CG +  A R F 
Sbjct: 528 TLITVISACANLVALERGEKIHSYVKEMGWDYD--VSINTALIDMYAKCGQLGTARRIFD 585

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M   DVV+WN +I G+ ++G+ ++A +L  +M+   S++P+  T + ++S C  S LL 
Sbjct: 586 SMLQHDVVAWNVMISGYGMHGEAKQALELFGKME-GGSIKPNGVTFLAILSACCHSGLLE 644

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           EGR +     +  L  +L     ++D   KS  L +AE +  A+    D   W +++S
Sbjct: 645 EGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLS 702


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/697 (29%), Positives = 351/697 (50%), Gaps = 41/697 (5%)

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           V++ AK G L  +   F+    +  V WN  +SG + N      +  FR+M W   + ++
Sbjct: 2   VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 61

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERA 233
            + S A++A A   ELS G+ +H L ++    D  Y V V  SL++MY++CGD+ AA R 
Sbjct: 62  FTYSGALSACAAGEELSVGRAVHGLVLR---RDPEYDVFVGTSLVNMYAKCGDMGAAMRE 118

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           FW M  ++VVSW   I GF  + +   A  LL EM +   V  +  T  +++  CA   +
Sbjct: 119 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREM-VRNGVAINKYTATSILLACAQMSM 177

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           +RE   +HG  ++  +  D ++  +L+  Y+    +  +E +F     +++   W++ IS
Sbjct: 178 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFIS 237

Query: 354 G-----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           G           L + M +   + +     ++  S NS   +EFG  +H   +K GF + 
Sbjct: 238 GVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHG 294

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            +  +AL  MY  C ++  ++ + + +    D   W  ++     +GH  EA  TF++M 
Sbjct: 295 ILVGSALSTMYSRCDNVQDSYKVFEEM-QERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 353

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
                 PD V+L  ++SAC   E   +GK +HG  L+ + G  T + +  I+MY +C+ +
Sbjct: 354 LD-GFKPDHVSLTAILSACNRPECLLKGKEVHGHTLR-VYGETTFINDCFISMYSKCQGV 411

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIV---SILSAC 579
           ++A  +F++    +   W+ MIS ++ N     A+ LF+ +      I      SILS C
Sbjct: 412 QTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLC 471

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWS 624
             +    + K +HG+    G   +  +SS+L+ +YS               +     AW+
Sbjct: 472 ADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWT 531

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           ++I  Y  HG    A+ +F  M   G+RP    ++S+LSACS +GLV++G  Y+N+M   
Sbjct: 532 TIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTA 591

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           Y V PE +H+ C+VD+LGRSG+L EA  F+ ++P++P   VW  +L+AC  H DT +G+ 
Sbjct: 592 YGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRF 651

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           V E   +    + G + +LSN+    G W++   I K
Sbjct: 652 V-ENKIREGNYDSGSFATLSNILANSGDWEEVARIRK 687



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 257/577 (44%), Gaps = 50/577 (8%)

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           ++ + ++ G +  A R F        V WNA + G   NG+   A ++  +M +  S EP
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDM-VWGSCEP 59

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           +  T    +S CA    L  GR+VHG  +RR   YD+ +  SL++ Y+K   +  A   F
Sbjct: 60  NSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREF 119

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             + P+ ++VSW + I+G            L +EM+      +  T  +IL +C     +
Sbjct: 120 WRM-PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 178

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
                IH   LK     + +   AL+  Y N G +  +  + +     S+ S W+  I  
Sbjct: 179 REASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISG 238

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
            + N     +++  + M   Q   P+     +V S+  ++E    G  LH  A+K     
Sbjct: 239 VS-NHSLLRSVQLLRRMF-HQGLRPNDKCYASVFSSVNSIEF---GGQLHSSAIKEGFIH 293

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
              V +AL TMY RC +++ +  VFE     +  +W  M++ F+ +   V A   FR++ 
Sbjct: 294 GILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMI 353

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
              F+P+ +S+ +ILSAC +   L  GK++HGH   + + E +FI+   + MYS C    
Sbjct: 354 LDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQ 412

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      K    WSSMIS Y  +G G EAI LF  M  + IR       S+LS C+
Sbjct: 413 TARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 472

Query: 667 HSGLVDEGLQYYNNMLEEYDVRP----ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
                D    +Y   L  Y ++     +      +V +  RSG + ++ +    + + P 
Sbjct: 473 -----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISV-PD 526

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKL--EPENV 757
              W  ++   + HG ++    + +L+ +L   P+ V
Sbjct: 527 LVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTV 563



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 155/584 (26%), Positives = 268/584 (45%), Gaps = 31/584 (5%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
              +L +F +      V WNA ++  V N    + +  F +MV      +S T    +SA
Sbjct: 11  LRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSA 70

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
                 L  GR VH L ++     D  +    VNMYAKCGD+ ++   F  M   + VSW
Sbjct: 71  CAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSW 130

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
            T ++G + ++ P   +L  REM  +G   +  + +S + A A +  +     IH  G+ 
Sbjct: 131 TTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIH--GMV 188

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEA 261
           L  E      V  +LIS Y+  G IE +E+ F    T  +   W+A I G + N     +
Sbjct: 189 LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRS 247

Query: 262 FDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
             LL  M  Q +R  +   A+V + ++       +  G  +H  AI+    + +L+ ++L
Sbjct: 248 VQLLRRMFHQGLRPNDKCYASVFSSVN------SIEFGGQLHSSAIKEGFIHGILVGSAL 301

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFS 367
              YS+ +++  +  +F  +    D VSW +M++G             F+ M+    +  
Sbjct: 302 STMYSRCDNVQDSYKVFEEMQE-RDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 360

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             +L AIL +CN PE L  GK +H   L++ +   T   +  + MY  C  +  A  +  
Sbjct: 361 HVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFD 419

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             +   D   W+ +I     NG  +EAI  F+ M    +   DS    +++S C ++   
Sbjct: 420 -ATPRKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYICSSILSLCADIARP 477

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           F  K LHG A+K+ +  D  V ++L+ +Y R  ++  +  VF+     +L  W  +I  +
Sbjct: 478 FYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGY 537

Query: 548 SQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHG 588
           +Q+ +   AL +F     L   P+ + +VS+LSAC++ G++  G
Sbjct: 538 AQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 581



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 259/555 (46%), Gaps = 34/555 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y+      +++  F+    ++VV+W   I   V++   V  +    EMV  G+ 
Sbjct: 100 TSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVA 159

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+ A  QM+ +++   +H + +K  M  D  +    ++ Y   G +  SE  
Sbjct: 160 INKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKV 219

Query: 131 FSGMHCADTVS----WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           F     A TVS    W+  +SG + N+   + +   R M   G + ++   +S  ++   
Sbjct: 220 FEE---AGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS--- 272

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           +  + +G  +H+  IK G+     + V ++L +MYS+C +++ + + F  M  +D VSW 
Sbjct: 273 VNSIEFGGQLHSSAIKEGFIHG--ILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWT 330

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A++ GFA +G   EAF     M ++   +PD  ++  ++S C     L +G+ VHG+ + 
Sbjct: 331 AMVAGFATHGHSVEAFLTFRNM-ILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTL- 388

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R+ G    + +  +  YSK   +  A  +F+A  P  D V W+SMISG            
Sbjct: 389 RVYGETTFINDCFISMYSKCQGVQTARRIFDA-TPRKDQVMWSSMISGYATNGCGEEAIS 447

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF+ M+    +       +IL  C       + K +H + +K G  ++    ++L+ +Y 
Sbjct: 448 LFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYS 507

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G++  +  +   IS   D   W  +I    Q+G  Q A+  F  M  Q    PD+V L
Sbjct: 508 RSGNMDDSRKVFDEIS-VPDLVAWTTIIDGYAQHGSSQNALAMFDLMV-QLGVRPDTVVL 565

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC 532
           V+V+SAC    L  +G +    ++++  G++  +Q+   ++ + GR   +  A    +S 
Sbjct: 566 VSVLSACSRNGLVEQGFNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSM 624

Query: 533 -YNCNLCTWNCMISA 546
               +L  W+ +++A
Sbjct: 625 PMKPDLMVWSTLLAA 639



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 186/358 (51%), Gaps = 15/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   ++L T YS     + S  +F E   +D V+W AM+     +   V     F
Sbjct: 290 GFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTF 349

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN-VFVNMYAK 120
             M+ +G + D  +L  I+SA  +  CL +G+ VH  +++  +  +++  N  F++MY+K
Sbjct: 350 RNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLR--VYGETTFINDCFISMYSK 407

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  + ++   F      D V W++++SG   N   E+ +  F+ M  +  + D+   SS 
Sbjct: 408 CQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSI 467

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +    Y K +H   IK G       SV++SL+ +YS+ G+++ + + F  ++  
Sbjct: 468 LSLCADIARPFYCKPLHGYAIKAGILSDQ--SVSSSLVKVYSRSGNMDDSRKVFDEISVP 525

Query: 241 DVVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D+V+W  IIDG+A +G  + A   FDL+ ++     V PD   +V+++S C+ + L+ +G
Sbjct: 526 DLVAWTTIIDGYAQHGSSQNALAMFDLMVQL----GVRPDTVVLVSVLSACSRNGLVEQG 581

Query: 298 RSVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +    ++R   G +  + +   ++D   +S  L++A+   +++    DL+ W+++++
Sbjct: 582 FNYFN-SMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLA 638


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 217/738 (29%), Positives = 354/738 (47%), Gaps = 42/738 (5%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T+  +++       L QG  +H   +K+G+ A     N  ++ Y+KC    S+   F  +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
                VSW+++++   +N  P   L  FR M     + +   L   +    C  +  +G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK---CAPDAGFGT 120

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAIIDGFA 253
            +HAL +  G     +V+  N+L++MY   G ++ A   F    C ++ VSWN ++  + 
Sbjct: 121 QLHALAMATGLGGDIFVA--NALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            N +   A  +  EM +   V+P+      +++ C  S  L  GR VH   IR     D+
Sbjct: 179 KNDRCSHAVKVFGEM-VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDV 237

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSF 368
              N+L+D YSK   +  A ++F  + P  D+VSWN+ ISG       +  L L  Q   
Sbjct: 238 FTANALVDMYSKLGDIRMAAVVFGKV-PETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296

Query: 369 S-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           S       TL +IL +C    +   G+ IH + +K    ++      L+ MY   G L  
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDD 356

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +   I    D   WN +I  C+      EA+  F  M +++    +  TL  V+ + 
Sbjct: 357 AKKVFDWIPQR-DLVLWNALISGCSHGAQHAEALSLFCRM-RKEGFDVNRTTLAAVLKST 414

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +LE   + + +H LA K     D+ V N LI  Y +C  +  A  VFE   + ++  + 
Sbjct: 415 ASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT 474

Query: 542 CMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MI+A SQ      A++LF  +     +P+   + S+L+AC  L     GKQ+H H+   
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
            F  + F  +AL+  Y+ C               K   +WS+MI     HG G  A+++F
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVF 594

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
           H M +  I P   ++ S+L AC+H+GLVDE  +Y+N+M E + +    EH+ C++D+LGR
Sbjct: 595 HRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGR 654

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +GKL +A E + ++P Q    VWGA+L+A   H D ++G+  AE LF LEPE  G ++ L
Sbjct: 655 AGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLL 714

Query: 764 SNMYVALGRWKDAVEIGK 781
           +N Y + G W D  ++ K
Sbjct: 715 ANTYASAGMWDDVAKVRK 732



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 186/651 (28%), Positives = 309/651 (47%), Gaps = 42/651 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL+ YS      S+  +F E  +   V+W++++TA   N      L  F  M    +R +
Sbjct: 43  LLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCN 102

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L +++           G  +H L++  G+  D  + N  V MY   G ++ +   F 
Sbjct: 103 EFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFD 159

Query: 133 GMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
              C  +TVSWN +MS  + N+     +  F EM W G Q +    S  V A     +L 
Sbjct: 160 EAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLE 219

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA+ I+ GY+   + +  N+L+ MYS+ GDI  A   F  +   DVVSWNA I G
Sbjct: 220 AGRKVHAMVIRTGYDKDVFTA--NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISG 277

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             L+G  + A +LL +M+    + P++ T+ +++  CA S     GR +HG+ ++     
Sbjct: 278 CVLHGHDQHALELLLQMK-SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADS 336

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  +   L+D Y+K   L  A+ +F+ I P  DLV WN++ISG            LF  M
Sbjct: 337 DNYIAFGLVDMYAKHGLLDDAKKVFDWI-PQRDLVLWNALISGCSHGAQHAEALSLFCRM 395

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                  + +TL A+L S  S E++   + +H    KLGF +++  VN L+  Y  C  L
Sbjct: 396 RKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCL 455

Query: 420 VAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
             A+ + ++  H S D   +  +I A +Q  H ++AIK F  M  ++   PD   L +++
Sbjct: 456 NYAYRVFEK--HGSYDIIAFTSMITALSQCDHGEDAIKLFMEML-RKGLDPDPFVLSSLL 512

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC +L    +GK +H   +K     D    NAL+  Y +C  I+ A   F       + 
Sbjct: 513 NACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVV 572

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +W+ MI   +Q+    RAL++F  +  E   PN I++ S+L AC   G++   K+     
Sbjct: 573 SWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYF--- 629

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
                       +++ +M+   ++   ++ MI   G  GK  +A+EL + M
Sbjct: 630 ------------NSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSM 668



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 262/557 (47%), Gaps = 29/557 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
            + +L+  Y    + + +  +F E  C ++ V+WN +++A V+N      +  FGEMV  
Sbjct: 137 VANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWG 196

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ +      +V+A T    L+ GR VH + I+ G   D    N  V+MY+K GD+  +
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   D VSWN  +SGC+ + + +  L    +M  SG   +  +LSS + A A  
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGS 316

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G  + G+ IH   +K   +   Y++    L+ MY++ G ++ A++ F  +  +D+V WNA
Sbjct: 317 GAFNLGRQIHGFMVKANADSDNYIAF--GLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNA 374

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G +   +  EA  L   M+     + +  T+  ++   A    + + R VH  A + 
Sbjct: 375 LISGCSHGAQHAEALSLFCRMR-KEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKL 433

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D  ++N L+D Y K + L+ A  +F       D++++ SMI+             L
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSY-DIIAFTSMITALSQCDHGEDAIKL 492

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F EML          L ++L +C S  + E GK +H   +K  F ++    NAL++ Y  
Sbjct: 493 FMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAK 552

Query: 416 CG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           CG   D   AFS L           W+ +I    Q+GH + A+  F  M   ++ SP+ +
Sbjct: 553 CGSIEDADLAFSGLP----EKGVVSWSAMIGGLAQHGHGKRALDVFHRMV-DEHISPNHI 607

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T+ +V+ AC +  L  E K     ++K + G++   ++   +I + GR   +  A  +  
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFN-SMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666

Query: 531 SC-YNCNLCTWNCMISA 546
           S  +  N   W  +++A
Sbjct: 667 SMPFQTNAAVWGALLAA 683



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 87/182 (47%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL+       L+ +Y        +  +F +  + D++ + +MITA  +       +  F
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ +G+  D   L  +++A   ++  +QG+ VH   IK   ++D    N  V  YAKC
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKC 553

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  FSG+     VSW+ ++ G   + + ++ L  F  M       ++++++S +
Sbjct: 554 GSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVL 613

Query: 182 AA 183
            A
Sbjct: 614 CA 615


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 216/746 (28%), Positives = 360/746 (48%), Gaps = 58/746 (7%)

Query: 79  IVSALTQMNC---LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           I SAL +      L  G  +H   +K+G++A     N  + +Y++C   +++   F  + 
Sbjct: 7   IGSALARFGTSRSLFAGAHLHSHLLKSGLLA--GFSNHLLTLYSRCRLPSAARAVFDEIP 64

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
               VSW+++++   +N  P   LL FR M   G   +  +L   +    C  ++ +G  
Sbjct: 65  DPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK---CAPDVRFGAQ 121

Query: 196 IHALGI--KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC----KDVVSWNAII 249
           +HAL +  +L ++    V V N+L+++Y   G ++ A R F         ++ VSWN +I
Sbjct: 122 VHALAVATRLVHD----VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  N +  +A  +  EM +     P+      +++ C  S  L  GR VHG  +R   
Sbjct: 178 SAYVKNDQSGDAIGVFREM-VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGY 236

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCS 364
             D+   N+L+D YSK   +  A  +F  + P  D+VSWN+ ISG          L L  
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKM-PAADVVSWNAFISGCVTHGHDHRALELLL 295

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q   S       TL ++L +C    +   G+ IH + +K     +      L+ MY   G
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHG 355

Query: 418 ---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVT 473
              D    F  + R     D   WN +I  C+ +G   E +  F  M ++  +   +  T
Sbjct: 356 FLDDARKVFDFMPR----RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTT 411

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L +V+ +  + E     + +H LA K  +  D+ V N LI  Y +C  +  A  VF+   
Sbjct: 412 LASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
           + ++ +   M++A SQ      A++LF  +     EP+   + S+L+ACT L     GKQ
Sbjct: 472 SDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQ 531

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H H+    F  + F  +AL+  Y+ C               +   +WS+MI     HG 
Sbjct: 532 VHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGH 591

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G  A++LFH M + G+ P   ++ S+LSAC+H+GLVD+  +Y+ +M E + +    EH+ 
Sbjct: 592 GKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYA 651

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++D+LGR+GKL++A E + N+P Q    VWGA+L A   H D ++G+  AE LF LEPE
Sbjct: 652 CMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPE 711

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
             G ++ L+N Y + G W +  ++ K
Sbjct: 712 KSGTHVLLANTYASAGMWDEMAKVRK 737



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 184/658 (27%), Positives = 315/658 (47%), Gaps = 45/658 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S  LLT YS      ++ A+F E  +   V+W++++TA   N      L  F  M   G+
Sbjct: 40  SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV 99

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +   L +++        ++ G  VH L++   ++ D  + N  V +Y   G ++ +  
Sbjct: 100 PCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARR 156

Query: 130 TFS---GMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            F    G+    + VSWNT++S  + N+     +  FREM WSGE+ +    S  V A  
Sbjct: 157 MFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACT 216

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              +L  G+ +H   ++ GYE   + +  N+L+ MYS+ GDIE A   F  M   DVVSW
Sbjct: 217 GSRDLEAGRQVHGAVVRTGYEKDVFTA--NALVDMYSKLGDIEMAATVFEKMPAADVVSW 274

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA I G   +G    A +LL +M+    + P++ T+ +++  CA +     GR +HG+ +
Sbjct: 275 NAFISGCVTHGHDHRALELLLQMK-SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMV 333

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           + +  +D  +   L+D Y+K   L  A  +F+ + P  DL+ WN++ISG           
Sbjct: 334 KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM-PRRDLILWNALISGCSHDGRHGEVL 392

Query: 355 -LFKEMLY--LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            LF  M    L    + +TL ++L S  S E++   + +H    K+G  +++  +N L+ 
Sbjct: 393 SLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLID 452

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y  CG L  A  + +  S + D      ++ A +Q  H ++AIK F  M  ++   PDS
Sbjct: 453 SYWKCGQLDYAIKVFKE-SRSDDIISSTTMMTALSQCDHGEDAIKLFVQML-RKGLEPDS 510

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
             L ++++AC +L    +GK +H   +K     D    NAL+  Y +C  I+ A   F  
Sbjct: 511 FVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSG 570

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
                + +W+ MI   +Q+    RAL+LF  +  E   PN I++ S+LSAC   G++   
Sbjct: 571 LPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDA 630

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           K+         F+       ++ + +   ++   ++ MI   G  GK  +A+EL + M
Sbjct: 631 KKY--------FE-------SMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNM 673



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 265/562 (47%), Gaps = 34/562 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETC----NKDVVTWNAMITACVENRCVVMGLHFFGEM 64
            + +L+  Y      + +  +F E       ++ V+WN MI+A V+N      +  F EM
Sbjct: 137 VANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM 196

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           V  G R +      +V+A T    L+ GR VH   ++ G   D    N  V+MY+K GD+
Sbjct: 197 VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F  M  AD VSWN  +SGC+ + +  + L    +M  SG   +  +LSS + A 
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A  G  + G+ IH   +K   +   +V+V   L+ MY++ G ++ A + F  M  +D++ 
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAV--GLVDMYAKHGFLDDARKVFDFMPRRDLIL 374

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI--ATVVTLISLCADSLLLREGRSVHG 302
           WNA+I G + +G+  E   L H M+    ++ D+   T+ +++   A S  +   R VH 
Sbjct: 375 WNALISGCSHDGRHGEVLSLFHRMR-KEGLDLDVNRTTLASVLKSTASSEAICHTRQVHA 433

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
            A +  L  D  ++N L+D Y K   L  A  +F   +  +D++S  +M++         
Sbjct: 434 LAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE-SRSDDIISSTTMMTALSQCDHGE 492

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               LF +ML    +     L ++L +C S  + E GK +H   +K  F+++    NAL+
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALV 552

Query: 411 HMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           + Y  CG   D   AFS L           W+ +I    Q+GH + A+  F  M   +  
Sbjct: 553 YAYAKCGSIEDADMAFSGLP----ERGIVSWSAMIGGLAQHGHGKRALDLFHRML-DEGV 607

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           +P+ +TL +V+SAC +  L  + K  +  ++K   G+D   ++   +I + GR   ++ A
Sbjct: 608 APNHITLTSVLSACNHAGLVDDAKK-YFESMKETFGIDRTEEHYACMIDILGRAGKLEDA 666

Query: 526 STVFESC-YNCNLCTWNCMISA 546
             +  +  +  N   W  ++ A
Sbjct: 667 MELVNNMPFQANAAVWGALLGA 688



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 204/458 (44%), Gaps = 19/458 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   + T+ +L+  YS +   E +  +F +    DVV+WNA I+ CV +      L   
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  +  TL  ++ A         GR +H   +KA    D  +    V+MYAK 
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD--NVSLSS 179
           G L+ +   F  M   D + WN ++SGC H+    + L  F  M   G   D    +L+S
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + ++A    + + + +HAL  K+G     +  V N LI  Y +CG ++ A + F     
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGLLSDSH--VINGLIDSYWKCGQLDYAIKVFKESRS 472

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D++S   ++   +     E+A  L  +M L + +EPD   + +L++ C       +G+ 
Sbjct: 473 DDIISSTTMMTALSQCDHGEDAIKLFVQM-LRKGLEPDSFVLSSLLNACTSLSAYEQGKQ 531

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VH + I+R    D+   N+L+  Y+K  S+  A++ F+ + P   +VSW++MI G     
Sbjct: 532 VHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGL-PERGIVSWSAMIGGLAQHG 590

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGV 406
                  LF  ML      +  TL ++L +CN    ++  K      +   G        
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY 650

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             ++ +    G L  A  L+  +   ++ + W  ++ A
Sbjct: 651 ACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGA 688


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/651 (30%), Positives = 338/651 (51%), Gaps = 39/651 (5%)

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           LL +  M  +    D  +  S V A   L   S+G   H   I  GY    Y++   SLI
Sbjct: 33  LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIA--TSLI 90

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           + YS+ G  ++A + F  M  ++VV W  +I  +   G+ + AF + + M+  + ++P  
Sbjct: 91  NFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMR-RQGIQP-- 147

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            + VT++ L +  L L   + +H   I+   G D+ + NS+++ Y K   +  A+ LF  
Sbjct: 148 -SSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE- 205

Query: 339 IAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEF 386
           +    D++SWNS++SG       +E+L L  +           T  +++ +      L  
Sbjct: 206 LMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGV 265

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK +H   L+ G   ++    +L+ MY+ CG++ +AF + + + H  D   W  +I    
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK-DVISWTAMISGLV 324

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           QN     A+  F+ M + +   P + T+ +V++AC  L     G S+HG  L+  + LD 
Sbjct: 325 QNDCADMAVTVFRRMLKSR-VMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDI 383

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHL 563
             QN+L+TMY +C  ++ + +VF+     ++ +WN ++S  +QN    +AL LF   R  
Sbjct: 384 PSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKA 443

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              P+ I++VS+L AC  +G L  GK IH  V          I +AL+DMYS C      
Sbjct: 444 RQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSA 503

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    +   +WSS+I+ YG HGKG  A+ ++ +  ++GI+P     +S+LSACSH+
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHN 563

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GLVD+GL ++++M +++ + P  EH  CIVD+L R+G+++EAY F K +  +P   V G 
Sbjct: 564 GLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGI 623

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +L AC   G+ ++G  VA  +  L+P N G Y+ L++ Y ++ RW    E+
Sbjct: 624 LLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEV 674



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 262/538 (48%), Gaps = 24/538 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +TSL+  YS   + +S+  +F    +++VV W  MI          +    +  M  +GI
Sbjct: 86  ATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGI 145

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           +  S T+L ++S + ++  L+    +H   I+ G  +D +L N  +N+Y KCG +  ++ 
Sbjct: 146 QPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQA 202

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D +SWN+++SG        + L     M   G + D  +  S V+A+A   +
Sbjct: 203 LFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSK 262

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK++H   ++ G E   ++    SLI MY +CG++ +A R F GM  KDV+SW A+I
Sbjct: 263 LGVGKMVHGHILRAGLEQDSHIE--TSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMI 320

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   N   + A  +   M L   V P  AT+ ++++ CA+      G SVHGY +R+ +
Sbjct: 321 SGLVQNDCADMAVTVFRRM-LKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRI 379

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+   NSL+  Y+K   L ++  +F+ ++   D+VSWN+++SG            LF 
Sbjct: 380 KLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS-RRDIVSWNAIVSGHAQNGHLCKALLLFN 438

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           EM     +    T++++L +C S  +L  GK IH +  K       +   AL+ MY  CG
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCG 498

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL +A     R+    D   W+ +I     +G  + A++ +          P+ V  +++
Sbjct: 499 DLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGETALRMYSDFL-HTGIQPNHVIYLSI 556

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRCRDIKSASTVFESCY 533
           +SAC +  L  +G S      K   G++ R+++   ++ +  R   ++ A + ++  +
Sbjct: 557 LSACSHNGLVDQGLSFFHSMTKDF-GIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMF 613



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 17/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  + S+L  Y      E + ALF     +DV++WN++++   +   +   L   
Sbjct: 176 GFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLL 235

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +GI  D  T   +VSA    + L  G++VH   ++AG+  DS +    + MY KC
Sbjct: 236 IRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++NS+   F GM   D +SW  ++SG + N+  +  +  FR M  S       +++S +
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVL 355

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA A LG    G  +H  G  L       +   NSL++MY++CG +E +   F  M+ +D
Sbjct: 356 AACAELGSFPLGTSVH--GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRD 413

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNAI+ G A NG   +A  L +EM+  R   PD  TVV+L+  CA    L +G+ +H
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQGKWIH 472

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +  +  LG  +L+  +L+D YSK   L  A+  F+ + P  DLVSW+S+I+G       
Sbjct: 473 NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM-PQQDLVSWSSIIAGYGSHGKG 531

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNA 408
                ++ + L+   Q +    L+IL +C+    ++ G S  H      G          
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G +  A+S  +R+          I++ AC   G+ +
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVE 635


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 247/828 (29%), Positives = 407/828 (49%), Gaps = 61/828 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+ +L  S +L+  Y  +    S+  LF E  N+++VTW  +I+   +N         F
Sbjct: 101 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 160

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ--MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +MV  G   +       + A  +   +  K G  +H L  K    +D  +CNV ++MY 
Sbjct: 161 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 220

Query: 120 KCGD-LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG---EQADNV 175
            C D  N +   F G+   +++SWN+I+S              F  M   G       N 
Sbjct: 221 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNE 280

Query: 176 SLSSAVAASACLGELSYG----KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
               ++  +AC   + +G    + + A   K G+    YVS  ++L+S +++ G  + A+
Sbjct: 281 YTFGSLITTAC-SSVDFGLCVLEQMLARVEKSGFLQDLYVS--SALVSGFARFGLTDDAK 337

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  M  ++VVS N ++ G     + E A  + HEM+ +  +  D + VV L +    S
Sbjct: 338 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFS 396

Query: 292 LL---LREGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           +L    R+GR VH + IR  L  + + + N L++ Y+KS +++ A  +F  +    D VS
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE-KDSVS 455

Query: 348 WNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WNS+ISGL            F  M    S  S  TL++ L SC S   +  G+ IHC  L
Sbjct: 456 WNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL 515

Query: 396 KLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQN-GHF 451
           KLG   +    NAL+ +Y   G   + +  FSL+       D   WN VI A + +    
Sbjct: 516 KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY----DQVSWNSVIGALSDSEASV 571

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            +A+K F  M  +       VT +N++SA  +L L      +H L LK  +  DT + NA
Sbjct: 572 SQAVKYFLQM-MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 630

Query: 512 LITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI 570
           L++ YG+C ++     +F       +  +WN MIS +  N+   +A++L   +  +   +
Sbjct: 631 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 690

Query: 571 ---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
              +  +ILSAC  +  L  G ++H        + +  + SAL+DMYS C          
Sbjct: 691 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 750

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                ++  +W+SMIS Y  HG G +A++LF  M   G  P   + + +LSACSH G V+
Sbjct: 751 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVE 810

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EG +++ +M E Y + P  EH  C+VD+LGR+GKL E  +FI ++P++P   +W  +L A
Sbjct: 811 EGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 870

Query: 733 C--SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           C  ++  +T++G++ AE+L +LEP+N   Y+ L+NMY +  +W+D  +
Sbjct: 871 CCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 918



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 190/732 (25%), Positives = 337/732 (46%), Gaps = 71/732 (9%)

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           C ++ R +H  SIK G + +  L N  +N+Y + GDL S++  F  M   + V+W  ++S
Sbjct: 86  CSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLIS 145

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGY 205
           G   N  P++    FR+M  +G   ++ +  SA+ A    G      G  IH L  K  Y
Sbjct: 146 GYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRY 205

Query: 206 EDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
                V V N LISMY  C D    A   F G+  ++ +SWN+II  ++  G    A+DL
Sbjct: 206 GSD--VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDL 263

Query: 265 LHEMQ---LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL--GY--DLLMMN 317
              MQ   L  S +P+  T  +LI+    S+    G  V    + R+   G+  DL + +
Sbjct: 264 FSSMQKEGLGFSFKPNEYTFGSLITTACSSVDF--GLCVLEQMLARVEKSGFLQDLYVSS 321

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC-- 363
           +L+  +++      A+ +F  +   N +VS N ++ GL            F EM  L   
Sbjct: 322 ALVSGFARFGLTDDAKNIFEQMGVRN-VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI 380

Query: 364 SQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVA 421
           +  S+  LL+     +   E    G+ +H   ++ G ++N + + N L++MY   G +  
Sbjct: 381 NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 440

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A S+ + +    D+  WN +I    QN   ++A ++F  M ++  + P + TL++ +S+C
Sbjct: 441 ACSVFELMVEK-DSVSWNSLISGLDQNECSEDAAESFHRM-RRTGSMPSNFTLISTLSSC 498

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +L     G+ +H   LK  +  D  V NAL+ +Y           VF      +  +WN
Sbjct: 499 ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 558

Query: 542 CMISAFSQNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
            +I A S ++A V +A++ F  +    +  + ++ ++ILSA + L +     QIH  V  
Sbjct: 559 SVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 618

Query: 598 LGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIE 641
               +++ I +ALL  Y  C                +   +W+SMIS Y ++    +A++
Sbjct: 619 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 678

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI---- 697
           L   M   G R    +  ++LSAC+    ++ G++     +    +R   E  V +    
Sbjct: 679 LVWFMMQKGQRLDSFTFATILSACASVATLERGME-----VHACGIRACLESDVVVGSAL 733

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL----- 752
           VDM  + G++  A  F + +P++     W +M+S  + HG    G++  +L  ++     
Sbjct: 734 VDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGH---GEKALKLFTRMMLDGQ 789

Query: 753 EPENVGYYISLS 764
            P++V +   LS
Sbjct: 790 PPDHVTFVGVLS 801



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 202/447 (45%), Gaps = 46/447 (10%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T  +LI+    S    E R +H  +I+     +L + N+L++ Y +   L  A+ LF+ +
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 340 APMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESL 384
           +  N LV+W  +ISG             F++M+   ++ + ++F + L      + P   
Sbjct: 133 SNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGC 190

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIV 443
           + G  IH    K  + ++ +  N L+ MY +C D    A S+   I   +  S WN +I 
Sbjct: 191 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS-WNSIIS 249

Query: 444 ACTQNGHFQEAIKTFKSMTQQQ---NASPDSVTLVNVI-SACGNLELAF-EGKSLHGLAL 498
             ++ G    A   F SM ++    +  P+  T  ++I +AC +++      + +     
Sbjct: 250 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVE 309

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           KS    D  V +AL++ + R      A  +FE     N+ + N ++    + K    A +
Sbjct: 310 KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 369

Query: 559 LFRHLE--FEPNEISIVSILSACTQLGVL----RHGKQIHGHVFHLGFQENSF-ISSALL 611
           +F  ++     N  S V +LSA ++  VL    R G+++H HV   G  +N   I + L+
Sbjct: 370 VFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 429

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           +MY+                 K + +W+S+IS    +    +A E FH M  +G  P+  
Sbjct: 430 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++IS LS+C+  G +  G Q + + L+
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLK 516


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 213/689 (30%), Positives = 339/689 (49%), Gaps = 38/689 (5%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +  L+ I+   T  + L  GR  H   +  G+  +  L    + MY  CG    ++  F 
Sbjct: 46  APQLVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 133 GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +    +  WN ++ G  +   +    L YF+ +G  G   D  +    + A   L  ++
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG-CGTLPDKYTFPYVIKACGGLNSVA 164

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+V+H     +G+E   +V   +SLI  YS+ G I  A   F  M  KD V WN +++G
Sbjct: 165 LGRVVHDKIQFMGFELDVFVG--SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG ++ A  +  EM+   +  P+  T   ++S+CA  +++  G  +HG  +   L  
Sbjct: 223 YVKNGDWDNATGVFMEMRRTET-NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEM 281

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + N+L+  Y+K   L  A  LF+ + P  DLV+WN MISG            LF EM
Sbjct: 282 DSPVANTLLAMYAKCGHLFDARRLFDMM-PKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +    +    T  + LP  +   +L  GK IHC+ ++ G S +    +AL+ +Y  C D+
Sbjct: 341 ISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDV 400

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +  + +      C   +I     NG    A++ F+ + Q++    +SVTL +V+ 
Sbjct: 401 EMAHKIFDQRTPVDIVVC-TAMISGYVLNGMNNNALEIFRWLLQER-MRANSVTLASVLP 458

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC  L     GK LHG  LK+  G    V +A++ MY +C  +  A   F      +   
Sbjct: 459 ACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVC 518

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVF 596
           WN MI++ SQN     A++LFR +     +   VSI   LSAC  L  L +GK+IH  + 
Sbjct: 519 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 578

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
              F+ + F  SAL+DMYS C               K+  +W+S+I+AYG HG+  +++ 
Sbjct: 579 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLN 638

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LFH M   GI+P   + ++++SAC H+G VDEG+ Y+  M EE  +    EH+ C+VD+ 
Sbjct: 639 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLF 698

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           GR+G+L EA+  I ++P  P  GVWG  L
Sbjct: 699 GRAGRLNEAFGMINSMPFSPDAGVWGLYL 727



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 149/545 (27%), Positives = 258/545 (47%), Gaps = 23/545 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   +SL+  YS       +  LF    +KD V WN M+   V+N         F
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM       +S T   ++S       +  G  +H L + +G+  DS + N  + MYAKC
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D V+WN ++SG + N + ++    F EM  +G + D+++ SS +
Sbjct: 297 GHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFL 356

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    L  GK IH   I+ G   S  V + ++LI +Y +C D+E A + F   T  D
Sbjct: 357 PLLSEGATLRQGKEIHCYIIRNGV--SLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVD 414

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V   A+I G+ LNG    A ++   + L   +  +  T+ +++  CA    L  G+ +H
Sbjct: 415 IVVCTAMISGYVLNGMNNNALEIFRWL-LQERMRANSVTLASVLPACAGLAALTLGKELH 473

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+ ++   G    + +++MD Y+K   L  A   F  I+   D V WNSMI+        
Sbjct: 474 GHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGIS-XKDAVCWNSMITSCSQNGKP 532

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M    +++   ++ A L +C +  +L +GK IH + ++  F ++    +AL
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 592

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG+L  A  +   +   ++ S WN +I A   +G  ++++  F  M       P
Sbjct: 593 IDMYSKCGNLDLACRVFDMMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGML-GDGIQP 650

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           D VT + +ISACG+     EG  +H    +   +G+  R+++   ++ ++GR   +  A 
Sbjct: 651 DHVTFLAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 708

Query: 527 TVFES 531
            +  S
Sbjct: 709 GMINS 713



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 218/448 (48%), Gaps = 17/448 (3%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P + +LL  Y+   +   +  LF      D+VTWN MI+  V+N  +      F EM+  
Sbjct: 284 PVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISA 343

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ DS T    +  L++   L+QG+ +HC  I+ G+  D  L +  +++Y KC D+  +
Sbjct: 344 GMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMA 403

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F      D V    ++SG + N      L  FR +     +A++V+L+S + A A L
Sbjct: 404 HKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L+ GK +H   +K G+  S YV   ++++ MY++CG ++ A + F G++ KD V WN+
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNS 521

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   + NGK EEA DL  +M  M   + D  ++   +S CA+   L  G+ +H + +R 
Sbjct: 522 MITSCSQNGKPEEAIDLFRQMG-MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG 580

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               DL   ++L+D YSK  +L  A  +F+ +   N+ VSWNS+I+             L
Sbjct: 581 AFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNE-VSWNSIIAAYGNHGRLKDSLNL 639

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F  ML    Q    T LAI+ +C     ++ G     C   +LG          ++ ++ 
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 699

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVI 442
             G L  AF ++  +  + D   W + +
Sbjct: 700 RAGRLNEAFGMINSMPFSPDAGVWGLYL 727



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 189/359 (52%), Gaps = 15/359 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y      E +  +F +    D+V   AMI+  V N      L  F  +++E +R
Sbjct: 388 SALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 447

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S TL  ++ A   +  L  G+ +H   +K G      + +  ++MYAKCG L+ +  T
Sbjct: 448 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQT 507

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+   D V WN++++ C  N  PE+ +  FR+MG +G + D VS+S+A++A A L  L
Sbjct: 508 FIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 567

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            YGK IHA  ++  +    +    ++LI MYS+CG+++ A R F  M  K+ VSWN+II 
Sbjct: 568 HYGKEIHAFMMRGAFRSDLFAE--SALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIA 625

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  +G+ +++ +L H M L   ++PD  T + +IS C  +  + EG  +H +   R + 
Sbjct: 626 AYGNHGRLKDSLNLFHGM-LGDGIQPDHVTFLAIISACGHAGQVDEG--IHYF---RCMT 679

Query: 311 YDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-FKEMLYL 362
            +L +M        ++D + ++  L++A  + N++    D   W   +  + F EML L
Sbjct: 680 EELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYLELVDFMEMLSL 738



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 219/496 (44%), Gaps = 47/496 (9%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +V+++  C D   L  GR  H   +   +GY+ ++   L+  Y    +   A+ +F  + 
Sbjct: 49  LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 341 PMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA-----------------ILPSCNSPES 383
                  WN MI G       +  QF F+ L                   ++ +C    S
Sbjct: 109 LWCS-EPWNWMIRGF-----TMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNS 162

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           +  G+ +H     +GF  +    ++L+  Y   G +  A  L  R+  + D   WN+++ 
Sbjct: 163 VALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVLWNVMLN 221

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              +NG +  A   F  M + +  +P+SVT   V+S C +  +   G  LHGL + S + 
Sbjct: 222 GYVKNGDWDNATGVFMEMRRTE-TNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLE 280

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           +D+ V N L+ MY +C  +  A  +F+     +L TWN MIS + QN     A  LF  +
Sbjct: 281 MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEM 340

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
                +P+ I+  S L   ++   LR GK+IH ++   G   + F+ SAL+D+Y  C+  
Sbjct: 341 ISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDV 400

Query: 621 ---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                             ++MIS Y  +G    A+E+F  +    +R    ++ S+L AC
Sbjct: 401 EMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC 460

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           +    +  G + + ++L+             I+DM  + GKL  A++    + I  K  V
Sbjct: 461 AGLAALTLGKELHGHILKNGH-GGSCYVGSAIMDMYAKCGKLDLAHQTF--IGISXKDAV 517

Query: 726 -WGAMLSACSHHGDTK 740
            W +M+++CS +G  +
Sbjct: 518 CWNSMITSCSQNGKPE 533


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 318/597 (53%), Gaps = 34/597 (5%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V ++  L+++Y   G++  A   F  +  +DV +WN +I G+   G   E         L
Sbjct: 86  VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + PD  T  +++  C   +   +G  +H  A++    +D+ +  SL+  YS+  ++ 
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS---QFSFSTLLAILPSCNSPE 382
            A +LF+ + P+ D+ SWN+MISG       KE L L +        T++++L +C    
Sbjct: 203 NARILFDEM-PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG 261

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
               G +IH + +K G  +     N L+ +Y   G L     +  R+ +  D   WN +I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWNSII 320

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
            A   N     AI  F+ M +     PD +TL+++ S    L      +S+ G  L+   
Sbjct: 321 KAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379

Query: 503 GL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
            L D  + NA++ MY +   + SA  VF    N ++ +WN +IS ++QN     A+E++ 
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 562 HLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            +E E     N+ + VS+L AC+Q G LR G ++HG +   G   + F+ ++L DMY  C
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499

Query: 618 K---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                           ++  W+++I+ +G+HG G +A+ LF EM + G++P   + ++LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACSHSGLVDEG   +  M  +Y + P  +H+ C+VDM GR+G+L+ A +FIK++ +QP 
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             +WGA+LSAC  HG+  +GK  +E LF++EPE+VGY++ LSNMY + G+W+   EI
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 188/666 (28%), Positives = 319/666 (47%), Gaps = 63/666 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+  + +H   + +  I +  +    VN+Y   G++  +  TF  +   D  +WN ++SG
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126

Query: 149 CLH-NNYPE--KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
                N  E  +C   F  M  SG   D  +  S + A   + +   G  IH L +K G+
Sbjct: 127 YGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF 181

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
               YV+   SLI +YS+   +  A   F  M  +D+ SWNA+I G+  +G  +EA  L 
Sbjct: 182 MWDVYVAA--SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           + ++ M SV     TVV+L+S C ++     G ++H Y+I+  L  +L + N L+D Y++
Sbjct: 240 NGLRAMDSV-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG--LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
              L   + +F+ +  + DL+SWNS+I    L ++ L   S F    L  I P C +  S
Sbjct: 295 FGRLRDCQKVFDRMY-VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353

Query: 384 L-----EFG-----KSIHCWQLKLGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           L     + G     +S+  + L+ G+   + TIG NA++ MY   G + +A ++   +  
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIG-NAVVVMYAKLGLVDSARAVFNWLP- 411

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           N+D   WN +I    QNG   EAI+ +  M ++   + +  T V+V+ AC       +G 
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            LHG  LK+ + LD  V  +L  MYG+C  ++ A ++F      N   WN +I+    + 
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              +A+ LF+ +  E   P+ I+ V++LSAC+  G++  G+      F +  Q +  I+ 
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW----CFEM-MQTDYGITP 586

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
           +L            +  M+  YG  G+   A++    M    ++P  S   +LLSAC   
Sbjct: 587 SL----------KHYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVH 633

Query: 669 GLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNLP----IQPKP 723
           G VD G     ++ E   V PE   +HV + +M   +GK  E  + I+++     ++  P
Sbjct: 634 GNVDLGKIASEHLFE---VEPEHVGYHVLLSNMYASAGKW-EGVDEIRSIAHGKGLRKTP 689

Query: 724 GVWGAM 729
           G W +M
Sbjct: 690 G-WSSM 694



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 173/647 (26%), Positives = 293/647 (45%), Gaps = 93/647 (14%)

Query: 30  FYETCNKDVVTWNAMITA---CVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM 86
           F    N+DV  WN MI+       +  V+     F  M+  G+  D  T     S L   
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTF---PSVLKAC 163

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
             +  G  +HCL++K G + D  +    +++Y++   + ++   F  M   D  SWN ++
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223

Query: 147 SG-CLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           SG C   N  E   L    R M       D+V++ S ++A    G+ + G  IH+  IK 
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G E   +VS  N LI +Y++ G +   ++ F  M  +D++SWN+II  + LN +   A  
Sbjct: 277 GLESELFVS--NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLM 320
           L  EM+L R ++PD  T+++L S+ +    +R  RSV G+ +R+  G+   D+ + N+++
Sbjct: 335 LFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRK--GWFLEDITIGNAVV 391

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ-----FS 367
             Y+K   +  A  +FN + P  D++SWN++ISG  +        EM  +  +      +
Sbjct: 392 VMYAKLGLVDSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T +++LP+C+   +L  G  +H   LK G   +   V +L  MY  CG L  A SL  
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           +I    ++  WN +I     +GH ++A+  FK M   +   PD +T V ++SAC +  L 
Sbjct: 511 QIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML-DEGVKPDHITFVTLLSACSHSGLV 568

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
            EG+    +               + T YG    +K                + CM+  +
Sbjct: 569 DEGQWCFEM---------------MQTDYGITPSLKH---------------YGCMVDMY 598

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-----HLGFQE 602
            +      AL+  + +  +P+     ++LSAC   G +  GK    H+F     H+G+  
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH- 657

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGY-HGK------GWEAIEL 642
                  L +MY+   S   W  +       HGK      GW ++E+
Sbjct: 658 -----VLLSNMYA---SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 255/531 (48%), Gaps = 32/531 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +  + SL+  YS      ++  LF E   +D+ +WNAMI+   ++      L   
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL--- 236

Query: 62  GEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              +  G+R  DS T++ ++SA T+     +G  +H  SIK G+ ++  + N  +++YA+
Sbjct: 237 --TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L   +  F  M+  D +SWN+I+     N  P + +  F+EM  S  Q D ++L S 
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354

Query: 181 VAASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +  + LG++   + +    ++ G+  ED   +++ N+++ MY++ G +++A   F  + 
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLED---ITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
             DV+SWN II G+A NG   EA ++ + M+    +  +  T V+++  C+ +  LR+G 
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            +HG  ++  L  D+ ++ SL D Y K   L  A  LF  I  +N  V WN++I+     
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS-VPWNTLIACHGFH 530

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIG 405
                   LFKEML    +    T + +L +C+    ++ G+      Q   G + +   
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQ 464
              ++ MY   G L  A   ++ +S   D S W  ++ AC  +G+     I +      +
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL-HGLALK-----SLMGLDTRVQ 509
                  V L N+ ++ G  E   E +S+ HG  L+     S M +D +V+
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 701


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 323/605 (53%), Gaps = 47/605 (7%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           HA  I+ GY+    ++    L       G    A   F+ +   D+  +N +I GF+ + 
Sbjct: 28  HAQLIRNGYQHD--LATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFS- 84

Query: 257 KFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
              +A  +     L++  ++ PD  T    IS   D  L   G  +H +A+      +L 
Sbjct: 85  --PDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLF 139

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYL 362
           + ++L+D Y K + ++ A  +F+ + P  D V WN+MI+GL            FK+M+  
Sbjct: 140 VASALVDLYCKFSRVAYARKVFDKM-PDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQ 198

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +   +T+  +LP+    + ++ G  I C  LKLGF  +   +  L+ ++  C D+  A
Sbjct: 199 GVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTA 258

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISA 480
             LL  +    D   +N +I   + NG  + A+K F+ +  + Q+ +S   V L+ V S 
Sbjct: 259 -RLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSP 317

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
            G+L LA     + G  +KS   L   V  AL T+Y R  +I  A  +F+      +  W
Sbjct: 318 FGHLHLAC---CIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAW 374

Query: 541 NCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N MIS ++Q+     A+ LF+ +   EF PN ++I SILSAC QLG L  GK +H  +  
Sbjct: 375 NAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKS 434

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
              ++N ++S+AL+DMY+ C               K+   W++MI  YG HG G EA++L
Sbjct: 435 KNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKL 494

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F+EM + G +P+  + +S+L ACSH+GLV EG + ++ M+ +Y + P  EH+ C+VD+LG
Sbjct: 495 FNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILG 554

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L++A EFI+ +P++P P VWG +L AC  H DT + +  +E LF+L+P NVGYY+ 
Sbjct: 555 RAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVL 614

Query: 763 LSNMY 767
           LSN+Y
Sbjct: 615 LSNIY 619



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 228/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++L  +++L+  Y   S    +  +F +  ++D V WN MIT  V N C    +  F
Sbjct: 133 GFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVF 192

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +MV +G+R DSTT+  ++ A+ +M  +K G  + CL++K G   D  +    +++++KC
Sbjct: 193 KDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKC 252

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D++++   F  +   D VS+N ++SG   N   E  + YFRE+  SG++  + ++   +
Sbjct: 253 EDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI 312

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             S+  G L     I    +K G    P  SV+ +L ++YS+  +I+ A + F   + K 
Sbjct: 313 PVSSPFGHLHLACCIQGFCVKSGTILQP--SVSTALTTIYSRLNEIDLARQLFDESSEKT 370

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V +WNA+I G+A +G  E A  L  EM +     P+  T+ +++S CA    L  G+SVH
Sbjct: 371 VAAWNAMISGYAQSGLTEMAISLFQEM-MTTEFTPNPVTITSILSACAQLGALSFGKSVH 429

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                + L  ++ +  +L+D Y+K  ++S+A  LF+  +  N  V+WN+MI G       
Sbjct: 430 QLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNT-VTWNTMIFGYGLHGYG 488

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
                LF EML+L  Q S  T L++L +C+    +  G  I H    K            
Sbjct: 489 DEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G L  A   ++++      + W  ++ AC
Sbjct: 549 MVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGAC 585



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 259/592 (43%), Gaps = 55/592 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L T T L     +V     + ALF+     D+  +N +I            + F+
Sbjct: 35  GYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKG-FSFSPDASSISFY 93

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             +++   +  D+ T    +SA    N    G  +H  ++  G  ++  + +  V++Y K
Sbjct: 94  THLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASALVDLYCK 150

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              +  +   F  M   DTV WNT+++G + N   +  +  F++M   G + D+ ++++ 
Sbjct: 151 FSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATV 210

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A + E+  G  I  L +KLG+    Y  V   LIS++S+C D++ A R  +GM  K
Sbjct: 211 LPAVAEMQEVKVGMGIQCLALKLGFHFDDY--VLTGLISVFSKCEDVDTA-RLLFGMIRK 267

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D+VS+NA+I GF+ NG+ E A     E+ L+       +T+V LI + +    L     
Sbjct: 268 PDLVSYNALISGFSCNGETECAVKYFREL-LVSGQRVSSSTMVGLIPVSSPFGHLHLACC 326

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           + G+ ++        +  +L   YS+ N +  A  LF+  +    + +WN+MISG     
Sbjct: 327 IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDE-SSEKTVAAWNAMISGYAQSG 385

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF+EM+      +  T+ +IL +C    +L FGKS+H          N     
Sbjct: 386 LTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVST 445

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CG++  A  L   ++   +T  WN +I     +G+  EA+K F  M      
Sbjct: 446 ALIDMYAKCGNISEASQLFD-LTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML-HLGF 503

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P SVT ++V+ AC +  L  EG  +                +A++  Y R   +     
Sbjct: 504 QPSSVTFLSVLYACSHAGLVREGDEIF---------------HAMVNKY-RIEPLAEH-- 545

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                       + CM+    +     +ALE  R +  EP      ++L AC
Sbjct: 546 ------------YACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGAC 585


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 245/864 (28%), Positives = 397/864 (45%), Gaps = 112/864 (12%)

Query: 18  SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL 77
           + VSY E      ++   KDV  WN+M++           L  F  + E  I  +  T  
Sbjct: 109 AQVSYAEKQ----FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           I++S   +   ++ GR +HC  IK G+  +S      V+MYAKC  ++ +   F  +   
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL------- 190
           +TV W  + SG +    PE+ +L F  M   G + D+++  + +     LG+L       
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284

Query: 191 --------------------------------------------SYGKVIHALGI----- 201
                                                       + G V+ A+GI     
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344

Query: 202 ----------KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
                     KLG   + YV   +SL+SMYS+C  +EAA + F  +  K+ V WNA+I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVG--SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG+  +  +L  +M+       D  T  +L+S CA S  L  G   H   I++ L  
Sbjct: 403 YAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +L + N+L+D Y+K  +L  A  +F  +    D V+WN++I              LFK M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAFDLFKRM 520

Query: 360 LYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
             LC   S    LA  L +C     L  GK +HC  +K G   +    ++L+ MY  CG 
Sbjct: 521 -NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  +   +   S  S  N +I   +QN + +EA+  F+ M   +  +P  +T   ++
Sbjct: 580 IKDARKVFSSLPEWSVVS-MNALIAGYSQN-NLEEAVVLFQEML-TRGVNPSEITFATIV 636

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN-ALITMYGRCRDIKSASTVF-ESCYNCN 536
            AC   E    G   HG   K     +      +L+ MY   R +  A  +F E     +
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           +  W  M+S  SQN     AL+ ++ +  +   P++ + V++L  C+ L  LR G+ IH 
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSN-AAWSSMISAYGYHGKGW 637
            +FHL    +   S+ L+DMY+ C               +SN  +W+S+I+ Y  +G   
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A+++F  M  S I P + + + +L+ACSH+G V +G + +  M+ +Y +    +H  C+
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR G LQEA +FI+   ++P   +W ++L AC  HGD   G+  AE L +LEP+N 
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
             Y+ LSN+Y + G W+ A  + K
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRK 960



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/596 (27%), Positives = 275/596 (46%), Gaps = 29/596 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++   +SL++ YS     E++  +F     K+ V WNAMI     N      +  F
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G   D  T   ++S     + L+ G   H + IK  +  +  + N  V+MYAKC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D V+WNTI+   + +    +    F+ M   G  +D   L+S +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   +  L  GK +H L +K G +   +    +SLI MYS+CG I+ A + F  +    
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTG--SSLIDMYSKCGIIKDARKVFSSLPEWS 594

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS NA+I G++ N   EEA  L  EM L R V P   T  T++  C     L  G   H
Sbjct: 595 VVSMNALIAGYSQN-NLEEAVVLFQEM-LTRGVNPSEITFATIVEACHKPESLTLGTQFH 652

Query: 302 GYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           G   +R    +   +  SL+  Y  S  +++A  LF+ ++    +V W  M+SG      
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712

Query: 355 ------LFKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                  +KEM +   L  Q +F T+L +   C+   SL  G++IH     L    + + 
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRV---CSVLSSLREGRAIHSLIFHLAHDLDELT 769

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N L+ MY  CGD+  +  +   +   S+   WN +I    +NG+ ++A+K F SM +Q 
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQS 828

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRCRDIK 523
           +  PD +T + V++AC +     +G+ +  + +    G++ RV +   ++ + GR   ++
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY-GIEARVDHVACMVDLLGRWGYLQ 887

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNKAEVRA-LELFRHLEFEPNEISIVSILS 577
            A    E+     +   W+ ++ A   +  ++R  +   + +E EP   S   +LS
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 171/683 (25%), Positives = 295/683 (43%), Gaps = 81/683 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ VH  S+  G+ ++  L N  V++YAKC  ++ +E  F  +   D  +WN+++S 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                 P K L  F  +  +    +  + S  ++  A    + +G+ IH   IK+G E +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            Y     +L+ MY++C  I  A R F  +   + V W  +  G+   G  EEA  L+ E 
Sbjct: 195 SYCG--GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV-LVFER 251

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
                  PD    VT+I+                                    Y +   
Sbjct: 252 MRDEGHRPDHLAFVTVINT-----------------------------------YIRLGK 276

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A LLF  ++   D+V+WN MISG             F  M     + + STL ++L 
Sbjct: 277 LKDARLLFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +     +L+ G  +H   +KLG ++N    ++L+ MY  C  + AA  + + +   +D  
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV- 394

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSL 493
            WN +I     NG   + ++ F  M +    + D  T  +++S C    +LE+   G   
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEM---GSQF 450

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H + +K  +  +  V NAL+ MY +C  ++ A  +FE   + +  TWN +I ++ Q++ E
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510

Query: 554 VRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A +LF+ +       +   + S L ACT +  L  GKQ+H      G   +    S+L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570

Query: 611 LDMYSNC----------KSNAAWS-----SMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMYS C           S   WS     ++I+ Y  +    EA+ LF EM   G+ P++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSE 629

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQEAYEFI 714
            +  +++ AC     +  G Q++  + +      E E+  + ++ M   S  + EA    
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALF 688

Query: 715 KNLPIQPKPGVWGAMLSACSHHG 737
             L       +W  M+S  S +G
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNG 711



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 210/463 (45%), Gaps = 82/463 (17%)

Query: 291 SLLLREGRSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +L LR G++VH  ++  +LG D    + N+++D Y+K   +S AE  F+ +    D+ +W
Sbjct: 73  ALALRIGKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAW 128

Query: 349 NSMIS----------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           NSM+S                 LF+  ++  ++F+FS    +L +C    ++EFG+ IHC
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSI---VLSTCARETNVEFGRQIHC 184

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K+G   N+    AL+ MY  C  +  A  + + I  + +T CW  +     + G  +
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV-DPNTVCWTCLFSGYVKAGLPE 243

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           EA+  F+ M + +   PD +  V VI+                                 
Sbjct: 244 EAVLVFERM-RDEGHRPDHLAFVTVINT-------------------------------- 270

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNE 569
              Y R   +K A  +F    + ++  WN MIS   +   E  A+E F   R    +   
Sbjct: 271 ---YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            ++ S+LSA   +  L  G  +H     LG   N ++ S+L+ MYS C            
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              K++  W++MI  Y ++G+  + +ELF +M +SG      +  SLLS C+ S  ++ G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            Q+++ ++++   +     +  +VDM  + G L++A +  + +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGN-ALVDMYAKCGALEDARQIFERM 489



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 138/315 (43%), Gaps = 34/315 (10%)

Query: 490 GKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           GK++H  +L  ++G+D+  R+ NA++ +Y +C  +  A   F+     ++  WN M+S +
Sbjct: 79  GKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMY 135

Query: 548 SQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           S      + L  F  L FE    PN+ +   +LS C +   +  G+QIH  +  +G + N
Sbjct: 136 SSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194

Query: 604 SFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           S+   AL+DMY+ C                +   W+ + S Y   G   EA+ +F  M +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G RP   + +++++     G + +    +  M       P+      ++   G+ G   
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-----SSPDVVAWNVMISGHGKRGCET 309

Query: 709 EAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-PENVGYYISLS 764
            A E+  N+    ++      G++LSA     +  +G  V     KL    N+    SL 
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369

Query: 765 NMYVALGRWKDAVEI 779
           +MY    + + A ++
Sbjct: 370 SMYSKCEKMEAAAKV 384



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 29/213 (13%)

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAY 630
           LR GK +H     LG      + +A++D+Y+ C              K   AW+SM+S Y
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMY 135

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
              GK  + +  F  +  + I P K +   +LS C+    V+ G Q + +M+ +  +   
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLERN 194

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG-KQVAELL 749
           +     +VDM  +  ++ +A    + + + P    W  + S     G  K G  + A L+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFS-----GYVKAGLPEEAVLV 248

Query: 750 FKL------EPENVGYYISLSNMYVALGRWKDA 776
           F+        P+++  ++++ N Y+ LG+ KDA
Sbjct: 249 FERMRDEGHRPDHLA-FVTVINTYIRLGKLKDA 280


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 201/600 (33%), Positives = 320/600 (53%), Gaps = 40/600 (6%)

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           ++ V  SLI +Y + G    A   F  M+ +DVVSWN +I G++ NG    A  L  +M 
Sbjct: 90  FIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDM- 148

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           L  + +P+  T+V+L+  C    L+ +GRS+HG+ I+   G D  + N+LM  Y+K + L
Sbjct: 149 LRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDL 208

Query: 330 SKAELLFNAIAPMNDLVSWNSMI-----SGLF-------KEMLYLCSQFSFSTLLAILPS 377
             ++LLF+ +     +VSWN+MI     +GLF       KEML      S  T++ ++ +
Sbjct: 209 EASQLLFDEMDE-KSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
              PE+      +HC+ +K GF+N+   V +L+ +Y   G    A   L +     D   
Sbjct: 268 NAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTA-KQLYKYYPTKDLIT 320

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
              +I + ++ G  + A++ F   T Q +  PD+V L+ V+    N      G + HG  
Sbjct: 321 LTAIISSYSEKGDIESAVECFIQ-TIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYG 379

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +KS +  D  V N LI++Y R  +I++A ++F       L TWN MIS   Q      A+
Sbjct: 380 VKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAM 439

Query: 558 ELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           ELF  +     +P+ I+I S+LS C QLG LR G+ +H ++     +   FI +AL+DMY
Sbjct: 440 ELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMY 499

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C                  A W+++IS Y  +G    A   + ++   G++P K + +
Sbjct: 500 SKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFL 559

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +L+AC+H GLV  GL+Y+N M +EY + P  +H+ CIV +LG+ G  +EA EFI  + I
Sbjct: 560 GVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEI 619

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           QP   VWGA+L+AC    + K+G+ +A+ LF L  +N G+Y+ +SN+Y  +GRW D   +
Sbjct: 620 QPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARV 679



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 278/593 (46%), Gaps = 51/593 (8%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           Q R +    +K G+     +    +++Y K G  + +   F  M   D VSWN ++ G  
Sbjct: 74  QARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYS 133

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N Y    +  F +M     + +  ++ S + +  C   +  G+ IH  GIK G+    +
Sbjct: 134 QNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSH 193

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           ++  N+L+SMY++C D+EA++  F  M  K VVSWN +I  +  NG F++A     EM L
Sbjct: 194 LN--NALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEM-L 250

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
                P   T++ L+S  A         +VH Y ++     D  ++ SL+  Y+K    +
Sbjct: 251 KEGFHPSSVTIMNLVSANAFP------ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTN 304

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSC 378
            A+ L+    P  DL++  ++IS              F + + L  +     L+ +L   
Sbjct: 305 TAKQLYK-YYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGI 363

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +P     G + H + +K G SN+ +  N L+ +Y    ++ AA SL   +      + W
Sbjct: 364 TNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT-W 422

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG 495
           N +I  C Q G   +A++ F  M+      PD++T+ +++S C   GNL +   G++LH 
Sbjct: 423 NSMISGCVQAGKSSDAMELFSEMS-MCGKKPDAITIASLLSGCCQLGNLRI---GETLHS 478

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             L++ + ++  +  ALI MY +C  +  A  VF +  +  L TWN +IS +S    E  
Sbjct: 479 YILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHT 538

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A   +  L+    +P++I+ + +L+ACT           HG + +LG +  + ++     
Sbjct: 539 AFGCYSKLQEQGLKPDKITFLGVLAACT-----------HGGLVYLGLEYFNIMTKE--- 584

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
            Y    S   ++ +++  G  G   EAIE  ++M    I+P  +   +LL+AC
Sbjct: 585 -YGLMPSLQHYACIVALLGKEGLFKEAIEFINKM---EIQPDSAVWGALLNAC 633



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 279/624 (44%), Gaps = 68/624 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +   TSL+  Y  + +   +  +F +   +DVV+WN +I    +N  +   +  
Sbjct: 85  RGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQL 144

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLK---QGRVVHCLSIKAGMIADSSLCNVFVNM 117
           F +M+ E  + + TT   IVS L    C +   QGR +H   IKAG   DS L N  ++M
Sbjct: 145 FVDMLRENFKPNQTT---IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSM 201

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKC DL +S+  F  M     VSWNT++     N   +K +LYF+EM   G    +V++
Sbjct: 202 YAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTI 261

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + V+A+A      + + +H   +K G+ +    SV  SL+ +Y++ G    A++ +   
Sbjct: 262 MNLVSANA------FPENVHCYVVKCGFTND--ASVVTSLVCLYAKQGFTNTAKQLYKYY 313

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
             KD+++  AII  ++  G  E A +  +  +QL   ++PD   ++ ++    +      
Sbjct: 314 PTKDLITLTAIISSYSEKGDIESAVECFIQTIQL--DIKPDAVALIGVLHGITNPSHFAI 371

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G + HGY ++  L  D L+ N L+  YS+ + +  A  LF  +     L++WNSMISG  
Sbjct: 372 GCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMRE-KPLITWNSMISGCV 430

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF EM     +    T+ ++L  C    +L  G+++H + L+        
Sbjct: 431 QAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF 490

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSC---WNIVIVACTQNGHFQEAIKTFKSM 461
              AL+ MY  CG L  A    +++ +N    C   WN +I   +  G    A   +  +
Sbjct: 491 IGTALIDMYSKCGRLDYA----EKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKL 546

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q+Q   PD +T + V++AC +  L + G     +  K   GL   +Q+           
Sbjct: 547 -QEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKE-YGLMPSLQH----------- 593

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQ 581
                             + C+++   +      A+E    +E +P+     ++L+AC  
Sbjct: 594 ------------------YACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCI 635

Query: 582 LGVLRHGKQIHGHVFHLGFQENSF 605
              ++ G+ +   +F L  +   F
Sbjct: 636 QREVKLGECLAKKLFLLNHKNGGF 659



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 28/228 (12%)

Query: 464 QQNASPDSVTLVNVISA---------CGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           Q N +P+  T   +I A         C +   A + + +    LK  +     V  +LI 
Sbjct: 41  QANVNPNEFTFSLLIKAYLSSPSFTHCPSTA-ALQARQIQTQCLKRGVNQFIHVHTSLID 99

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEIS 571
           +Y +      A  +F+     ++ +WN +I  +SQN     A++LF  +    F+PN+ +
Sbjct: 100 LYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTT 159

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
           IVS+L +C    ++  G+ IHG     GF  +S +++AL+ MY+ C              
Sbjct: 160 IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMD 219

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
            KS  +W++MI  YG +G   +AI  F EM   G  P+  ++++L+SA
Sbjct: 220 EKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 183/594 (30%), Positives = 319/594 (53%), Gaps = 34/594 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S++ + G +  A R F  +  K    ++ ++ G+A N   ++A      M+    V 
Sbjct: 114 KLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRY-DGVR 172

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +     L+ +C D+  LR+G+ +H   I      ++  M  +++ Y+K   + +A  +
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ + P  DLV WN++ISG            L   M     +    T+++ILP+     S
Sbjct: 233 FDRM-PERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGS 291

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G+SIH + ++ GF +      AL+ MY  CG +  A  +  R++  +  S WN +I 
Sbjct: 292 LRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVS-WNSMID 350

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG    A++ F+ M  +Q     +VT++  + AC +L    +G+ +H L  +  +G
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQ-VEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG 409

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            D  V N+LI+MY +C+ +  A+ +FE+  +  L +WN MI  ++QN     A++ F  +
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469

Query: 564 EFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           + +   P+  ++VS++ A  +L VL   K IHG V      +N F+++AL+DMY+ C   
Sbjct: 470 QLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAV 529

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG HG G  A+ELF +M    I+P + + + +LSAC
Sbjct: 530 HTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSAC 589

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGLV+EG QY+ +M ++Y + P  +H+  +VD+LGR+ +L EA++FI+ +PI+P   V
Sbjct: 590 SHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISV 649

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +GAML AC  H + ++G++ A  +F L+P++ GY++ L+N+Y     W     +
Sbjct: 650 FGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARV 703



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 234/459 (50%), Gaps = 21/459 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++   T ++  Y+     E +  +F     +D+V WN +I+   +N      L   
Sbjct: 205 GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELV 264

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EEG R DS T++ I+ A+  +  L+ GR +H  S++AG  +  ++    V+MY+KC
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + ++   F  M     VSWN+++ G + N  P   +  F++M     +  NV++  A+
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGAL 384

Query: 182 AASACLGELSYGKVIHAL--GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A A LG++  G+ +H L   ++LG +    VSV NSLISMYS+C  ++ A   F  +  
Sbjct: 385 HACADLGDVEQGRFVHKLLDQLELGSD----VSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K +VSWNA+I G+A NG+  EA D   +MQL ++++PD  T+V++I   A+  +L + + 
Sbjct: 441 KTLVSWNAMILGYAQNGRINEAIDYFCKMQL-QNIKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG  IR  L  ++ +  +L+D Y+K  ++  A  LF+ +   + + +WN+MI G     
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH-VTTWNAMIDGYGTHG 558

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGV 406
                  LF++M     + +  T L +L +C+    +E G +     +   G        
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY 618

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            A++ +      L  A+  +Q++      S +  ++ AC
Sbjct: 619 GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGAC 657



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 251/530 (47%), Gaps = 23/530 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L++ +        +  +F    +K    ++ M+     N  +   + FF  M  +G+R
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
                   ++        L++G+ +HC  I  G  ++       VNMYAKC  +  +   
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D V WNTI+SG   N + +  L     M   G++ D++++ S + A A +G L
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ IH   ++ G+E   +V+V+ +L+ MYS+CG +  A   F  MT K VVSWN++ID
Sbjct: 293 RIGRSIHGYSMRAGFES--FVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  NG    A ++  +M +   VE    TV+  +  CAD   + +GR VH    +  LG
Sbjct: 351 GYVQNGDPGAAMEIFQKM-MDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG 409

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------LFKEMLYLC- 363
            D+ +MNSL+  YSK   +  A  +F  +     LVSWN+MI G      + + + Y C 
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQ-HKTLVSWNAMILGYAQNGRINEAIDYFCK 468

Query: 364 ------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                    SF T+++++P+      L   K IH   ++     N     AL+ MY  CG
Sbjct: 469 MQLQNIKPDSF-TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCG 527

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  L   +     T+ WN +I     +G  + A++ F+ M +++   P+ VT + V
Sbjct: 528 AVHTARKLFDMMDERHVTT-WNAMIDGYGTHGLGKAALELFEKM-KKEVIKPNEVTFLCV 585

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           +SAC +  L  EG    G ++K   GL+  + +  A++ + GR   +  A
Sbjct: 586 LSACSHSGLVEEGFQYFG-SMKKDYGLEPAMDHYGAMVDLLGRANRLNEA 634


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 199/619 (32%), Positives = 316/619 (51%), Gaps = 36/619 (5%)

Query: 194 KVIHALGIKLGYEDSPYVS-VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           K IHA  I LG   SPY   + +SL + Y+  G    A + F  +    + SWNA+I  +
Sbjct: 38  KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMY 97

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G   +A  L  +M       PD  T   +I  C D LL   G  +H   +      D
Sbjct: 98  TNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSD 157

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE------------ML 360
             + NSLM  Y     +  A  +F+ +     LVSWN+MI+G FK             M+
Sbjct: 158 AFVQNSLMAMYMNCGEMEVARRVFDLMRE-RTLVSWNTMINGYFKNGCVKEALMVFDWMI 216

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               +   +T++++LP C+  + LE G+ +H          +    N+L+ MY  CG++ 
Sbjct: 217 GKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +    D   W  ++     NG  + A+     M Q ++  P+ VTL +V+SA
Sbjct: 277 EAQMIFYEMD-KRDVVSWTTMMNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSA 334

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +L     G+ LHG A++  +  +  V+ ALI MY +C ++  +  VF          W
Sbjct: 335 CASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPW 394

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +IS    N    +A+ELF+ +  E   PN+ ++ S+L A   L  L+  + +HG++  
Sbjct: 395 NAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIR 454

Query: 598 LGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAI 640
            GF     +++ L+D+YS C                 K    WS++I+ YG HG G  AI
Sbjct: 455 SGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAI 514

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF +M  SG++P + +  S+L ACSH+GLVDEGL  +  MLE+  +   T+H+ C++D+
Sbjct: 515 SLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDL 574

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G+L+EAYE I+ +  +P   VWGA+L +C  H + ++G+  A+ LF+LEP N G Y
Sbjct: 575 LGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNY 634

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + L+N+Y A+GRW+DA  +
Sbjct: 635 VLLANIYSAVGRWRDAEHV 653



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 305/617 (49%), Gaps = 37/617 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL  AY+       +  LF E  N  + +WNAMI     +      L  F +M+  G R
Sbjct: 60  SSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRR 119

Query: 71  F-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D+ T   ++ A       + G ++H  ++ +G  +D+ + N  + MY  CG++  +  
Sbjct: 120 WPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARR 179

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M     VSWNT+++G   N   ++ L+ F  M   G + D  ++ S +   + L E
Sbjct: 180 VFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239

Query: 190 LSYGKVIHAL-GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           L  G+ +HAL  +K   ED   +SV NSL+ MY++CG+++ A+  F+ M  +DVVSW  +
Sbjct: 240 LEVGRRVHALVEVKNLGED---ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTM 296

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           ++G+ LNG    A  LL +M    SV+P+  T+ +++S CA    L+ GR +HG+AIR+ 
Sbjct: 297 MNGYILNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQK 355

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  ++++  +L+D Y+K N+++ +  +F+  +       WN++ISG            LF
Sbjct: 356 LESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRT-APWNAIISGCIHNGLSRKAIELF 414

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K+ML      + +TL ++LP+      L+  +++H + ++ GF +       L+ +Y  C
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKC 474

Query: 417 GDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           G L +A ++   I   + D   W+ +I     +GH + AI  F  M  Q    P+ +T  
Sbjct: 475 GSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMV-QSGVKPNEITFT 533

Query: 476 NVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFES-CY 533
           +++ AC +  L  EG  L    L+ + M L T     +I + GR   ++ A  +  +  +
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAF 593

Query: 534 NCNLCTWNCMISA--FSQNK--AEVRALELFRHLEFEP----NEISIVSILSACTQLGVL 585
             N   W  ++ +    +N    EV A  LF   E EP    N + + +I SA   +G  
Sbjct: 594 RPNHAVWGALLGSCVIHENVELGEVAAKWLF---ELEPGNTGNYVLLANIYSA---VGRW 647

Query: 586 RHGKQIHGHVFHLGFQE 602
           R  + +   + ++G ++
Sbjct: 648 RDAEHVRLMMNNIGLRK 664



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 242/498 (48%), Gaps = 20/498 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      SL+  Y N    E +  +F     + +V+WN MI    +N CV   L  F
Sbjct: 153 GFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVF 212

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ +GI  D  T++ ++   + +  L+ GR VH L     +  D S+ N  ++MYAKC
Sbjct: 213 DWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKC 272

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+++ ++  F  M   D VSW T+M+G + N      LL  + M +   + + V+L+S +
Sbjct: 273 GNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVL 332

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  L +G+ +H   I+   E    V V  +LI MY++C ++  + R F   + + 
Sbjct: 333 SACASLYSLKHGRCLHGWAIRQKLESE--VIVETALIDMYAKCNNVNLSFRVFSKTSKQR 390

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
              WNAII G   NG   +A +L  +M LM +V+P+ AT+ +L+   A    L++ R++H
Sbjct: 391 TAPWNAIISGCIHNGLSRKAIELFKQM-LMEAVDPNDATLNSLLPAYAFLTDLQQARNMH 449

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------ 354
           GY IR      + +   L+D YSK  SL  A  +FN I   + D+++W+++I+G      
Sbjct: 450 GYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGH 509

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVN 407
                 LF +M+    + +  T  +IL +C+    ++ G  +  + L+    S  T    
Sbjct: 510 GETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYT 569

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQ 465
            ++ +    G L  A+ L++ ++   + + W  ++ +C   +N    E    +    +  
Sbjct: 570 CVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPG 629

Query: 466 NASPDSVTLVNVISACGN 483
           N   + V L N+ SA G 
Sbjct: 630 NTG-NYVLLANIYSAVGR 646



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 181/410 (44%), Gaps = 35/410 (8%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---VNALMHMYINCGDLVAAFSLLQRI 429
           ++L  C S +S+   K IH   + LG  ++      +++L   Y   G    A  L   +
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
             N     WN +I   T +G   +A+  F  M       PD+ T   VI ACG+  L   
Sbjct: 83  -RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G  +H   + S    D  VQN+L+ MY  C +++ A  VF+      L +WN MI+ + +
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFK 201

Query: 550 NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N     AL +F  +     EP+  ++VS+L  C+ L  L  G+++H  V      E+  +
Sbjct: 202 NGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISV 261

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            ++LLDMY+ C               +   +W++M++ Y  +G    A+ L   M    +
Sbjct: 262 WNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV 321

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKL 707
           +P   ++ S+LSAC+    +  G       L  + +R + E  V +    +DM  +   +
Sbjct: 322 KPNFVTLASVLSACASLYSLKHG-----RCLHGWAIRQKLESEVIVETALIDMYAKCNNV 376

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
             ++        Q +   W A++S C H+G   + ++  EL  ++  E V
Sbjct: 377 NLSFRVFSKTSKQ-RTAPWNAIISGCIHNG---LSRKAIELFKQMLMEAV 422


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 213/725 (29%), Positives = 358/725 (49%), Gaps = 44/725 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G  +H   +K+G +A  S  N  ++ Y+KC     +   F  +     VSW+++++ 
Sbjct: 20  LLPGAHLHASLLKSGSLA--SFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTA 77

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             +N  P   +  F  M   G   +  +L   +    C+ +   G  +HA+ +  G+   
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSD 134

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            +V+  N+L++MY   G ++ A R F    + ++ VSWN ++  +  N +  +A  +  E
Sbjct: 135 VFVA--NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   ++P       +++ C  S  +  GR VH   +R     D+   N+L+D Y K  
Sbjct: 193 M-VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A ++F  + P +D+VSWN++ISG            L  +M Y     +  TL +IL
Sbjct: 252 RVDIASVIFEKM-PDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+   + + G+ IH + +K    S++ IGV  L+ MY     L  A  +   + H   
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFLDDARKVFDWMFHRDL 369

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             C N +I  C+  G   EA+  F  + +++    +  TL  V+ +  +LE A   + +H
Sbjct: 370 ILC-NALISGCSHGGRHDEALSLFYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            LA+K     D  V N LI  Y +C  +  A+ VFE C + ++     MI+A SQ     
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A++LF  +     EP+   + S+L+AC  L     GKQ+H H+    F  ++F  +AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
             Y+ C               +   +WS+MI     HG G  A+ELF  M + GI P   
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           ++ S+L AC+H+GLVDE  +Y+N+M E + +    EH+ C++D+LGR+GKL +A E + +
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P Q    +WGA+L A   H D ++GK  AE LF LEPE  G ++ L+N Y + G W + 
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEV 727

Query: 777 VEIGK 781
            ++ K
Sbjct: 728 AKVRK 732



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 183/672 (27%), Positives = 310/672 (46%), Gaps = 57/672 (8%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDV--------------VTWNAMITACVE 50
           AHL  S   L    +++ F + L  FY  C +                V+W++++TA   
Sbjct: 24  AHLHAS---LLKSGSLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 51  NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           N      +  F  M  EG+  +   L +++  +      + G  VH +++  G  +D  +
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
            N  V MY   G ++ +   F+      + VSWN +MS  + N+     +  F EM WSG
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            Q      S  V A      +  G+ +HA+ +++GY+   + +  N+L+ MY + G ++ 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA--NALVDMYMKMGRVDI 255

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M   DVVSWNA+I G  LNG    A +LL +M+    V P++ T+ +++  C+
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV-PNVFTLSSILKACS 314

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            +     GR +HG+ I+     D  +   L+D Y+K++ L  A  +F+ +    DL+  N
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF-HRDLILCN 373

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++ISG            LF E+       + +TL A+L S  S E+    + +H   +K+
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF  +   VN L+  Y  C  L  A  + +  S     +C ++ I A +Q  H + AIK 
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSM-ITALSQCDHGEGAIKL 492

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  M  ++   PD   L ++++AC +L    +GK +H   +K     D    NAL+  Y 
Sbjct: 493 FMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
           +C  I+ A   F S     + +W+ MI   +Q+    RALELF  +  E   PN I++ S
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L AC   G++   K+                 +++ +M+   ++   +S MI   G  G
Sbjct: 612 VLCACNHAGLVDEAKRYF---------------NSMKEMFGIDRTEEHYSCMIDLLGRAG 656

Query: 635 KGWEAIELFHEM 646
           K  +A+EL + M
Sbjct: 657 KLDDAMELVNSM 668



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 275/588 (46%), Gaps = 30/588 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF + +  + +L+  Y    + + +  +F E    ++ V+WN +++A V+N      +  
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEMV  GI+        +V+A T    ++ GR VH + ++ G   D    N  V+MY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  M  +D VSWN ++SGC+ N +  + +    +M +SG   +  +LSS 
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +  G    G+ IH   IK   +   Y+ V   L+ MY++   ++ A + F  M  +
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGV--GLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++  NA+I G +  G+ +EA  L +E++    +  +  T+  ++   A        R V
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELR-KEGLGVNRTTLAAVLKSTASLEAASTTRQV 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H  A++    +D  ++N L+D Y K + LS A  +F   +   D+++  SMI+       
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS-GDIIACTSMITALSQCDH 485

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EML    +     L ++L +C S  + E GK +H   +K  F ++    NA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L++ Y  CG   D   AFS L           W+ +I    Q+GH + A++ F  M   +
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLP----ERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DE 600

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
             +P+ +T+ +V+ AC +  L  E K     ++K + G+D   ++   +I + GR   + 
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFN-SMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
            A  +  S  +  N   W  ++ A   +K  E+  L   +    EP +
Sbjct: 660 DAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707



 Score = 40.0 bits (92), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 2/158 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F++      +L+  Y+     E +   F     + VV+W+AMI    ++      L  
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FG MV+EGI  +  T+  ++ A      + +  R  + +    G+       +  +++  
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           + G L+ + E   S    A+   W  ++     +  PE
Sbjct: 654 RAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPE 691


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 205/724 (28%), Positives = 362/724 (50%), Gaps = 43/724 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L++G+ +H   +++ +  D+ L +  +NMY KCG L  +   F GM   D V+W  ++S 
Sbjct: 66  LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                  ++ L  F  M   G   +  +L+S + A +      +   +H   +KL   D 
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDD 185

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           PYV   +SL+  Y+ CG+++AAE    G+  +  VSWNA+++G+A +G +     ++ ++
Sbjct: 186 PYVG--SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKL 243

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +    E    T+ T++  C +  L + G+SVH   I+R L  D ++ + L++ YS+  S
Sbjct: 244 -VASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLS 302

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
             +A  +F  I    D+V  ++MIS             LF +M  +  + +    + I  
Sbjct: 303 AEEAYEVFIRIDE-PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAG 361

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNS 433
             +        +S+H + +K GF+      +A+++MY+  G   D    F L+    H  
Sbjct: 362 VASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLI----HEP 417

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           DT  WN ++ A     + ++ ++ FK M  +   S +  T V+V+  C +L     G  +
Sbjct: 418 DTFSWNTILSAFYSGSNCEQGLRIFKQMACE-GFSANKYTYVSVLRCCTSLMNLRFGTQV 476

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   LKS +  DT V   L+ MY +     SA  VFE     +  +W  ++S +++ +  
Sbjct: 477 HACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEA 536

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            + +E FR +      P++ ++   LS C+ +  L  G Q+H      G+  +S +S AL
Sbjct: 537 EKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWN-SSVVSGAL 595

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C               +   AW+++I  Y  HG G++A++ F +M + G RP  
Sbjct: 596 VDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDG 655

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + + +LSACSH+GL++EG +Y+ ++   Y + P  EH+ C+VD+L ++G+L EA   I 
Sbjct: 656 ITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLIN 715

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P+ P   +W  +L AC  H + ++ ++ AE LF+LEP +    I LSN+Y  LGRW D
Sbjct: 716 QMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSD 775

Query: 776 AVEI 779
              +
Sbjct: 776 VTRV 779



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 283/600 (47%), Gaps = 34/600 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL  Y        +  +F    ++D+V W AMI+A          L  F  M +EGI  
Sbjct: 90  SLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAP 149

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TL  ++ A +  +  K    VH   +K   + D  + +  V  Y  CG+L+++E   
Sbjct: 150 NGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVL 209

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+     VSWN +++G   +    + ++   ++  SG++    +L + +     LG   
Sbjct: 210 LGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAK 269

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           YG+ +HA  IK G E     +V NS L+ MYS+C   E A   F  +   DVV  +A+I 
Sbjct: 270 YGQSVHASVIKRGLETD---NVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMIS 326

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            F  +    EA DL  +M  M  V+P+    V +  + + +      RSVH Y ++   G
Sbjct: 327 CFDRHDMAWEALDLFVKMSGM-GVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKS--G 383

Query: 311 YDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           + +L  + +++++ Y K  ++  A + F+ I    D  SWN+++S             +F
Sbjct: 384 FAMLKGVGDAILNMYVKVGAVQDATVTFDLIHE-PDTFSWNTILSAFYSGSNCEQGLRIF 442

Query: 357 KEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           K+M   C  FS +  T +++L  C S  +L FG  +H   LK G  N+T     L+ MY 
Sbjct: 443 KQM--ACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYA 500

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G   +A  + +++    D   W +++    +    ++ ++ F+SM  ++N  P   TL
Sbjct: 501 QSGCFTSACLVFEQLKER-DAFSWTVIMSGYAKTEEAEKVVEYFRSML-RENIRPSDATL 558

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTR-VQNALITMYGRCRDIKSASTVFESCY 533
              +S C ++     G  LH  A+KS  G ++  V  AL+ MY +C +I  A  +F    
Sbjct: 559 AVSLSVCSDMASLGSGLQLHSWAIKS--GWNSSVVSGALVDMYVKCGNIADAEMLFHESE 616

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             +   WN +I  +SQ+    +AL+ F+ +  E   P+ I+ V +LSAC+  G+L  G++
Sbjct: 617 TRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRK 676



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 262/588 (44%), Gaps = 34/588 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+ AY++    +++  +      +  V+WNA++     +      +    ++V  G  
Sbjct: 190 SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDE 249

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
               TL  ++    ++   K G+ VH   IK G+  D+ L +  V MY++C     +   
Sbjct: 250 ISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEV 309

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D V  + ++S    ++   + L  F +M   G + ++         ++  G+ 
Sbjct: 310 FIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDA 369

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           +  + +HA  +K G+  +    V +++++MY + G ++ A   F  +   D  SWN I+ 
Sbjct: 370 NLCRSVHAYIVKSGF--AMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILS 427

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            F      E+   +  +M        +  T V+++  C   + LR G  VH   ++  L 
Sbjct: 428 AFYSGSNCEQGLRIFKQMAC-EGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQ 486

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D  +   L+D Y++S   + A L+F  +    D  SW  ++SG             F+ 
Sbjct: 487 NDTDVSRMLVDMYAQSGCFTSACLVFEQLKE-RDAFSWTVIMSGYAKTEEAEKVVEYFRS 545

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML    + S +TL   L  C+   SL  G  +H W +K G+ N+++   AL+ MY+ CG+
Sbjct: 546 MLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGW-NSSVVSGALVDMYVKCGN 604

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  L    S   D   WN +I   +Q+GH  +A+  FK M   +   PD +T V V+
Sbjct: 605 IADAEMLFHE-SETRDQVAWNTIICGYSQHGHGYKALDAFKQMV-DEGKRPDGITFVGVL 662

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKSASTVFESCY 533
           SAC +  L  EG+     +L S+ G+   +++      +++  GR   +++ S + +   
Sbjct: 663 SACSHAGLLNEGRKYFK-SLSSIYGITPTMEHYACMVDILSKAGRL--VEAESLINQMPL 719

Query: 534 NCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEISIVSILS 577
             +   W  ++ A   ++    AE  A  LF   E EP++ S   +LS
Sbjct: 720 APDSSIWRTILGACRIHRNIEIAERAAERLF---ELEPHDASSSILLS 764



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 227/505 (44%), Gaps = 35/505 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       ++ L+  YS     E +  +F      DVV  +AMI+    +      L  
Sbjct: 281 RGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDL 340

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   G++ +    + I    ++       R VH   +K+G      + +  +NMY K
Sbjct: 341 FVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVK 400

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G +  +  TF  +H  DT SWNTI+S     +  E+ L  F++M   G  A+  +  S 
Sbjct: 401 VGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSV 460

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     L  L +G  +HA  +K G ++     V+  L+ MY+Q G   +A   F  +  +
Sbjct: 461 LRCCTSLMNLRFGTQVHACILKSGLQND--TDVSRMLVDMYAQSGCFTSACLVFEQLKER 518

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D  SW  I+ G+A   + E+  +    M L  ++ P  AT+   +S+C+D   L  G  +
Sbjct: 519 DAFSWTVIMSGYAKTEEAEKVVEYFRSM-LRENIRPSDATLAVSLSVCSDMASLGSGLQL 577

Query: 301 HGYAIRRLLGYD-LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           H +AI+   G++  ++  +L+D Y K  +++ AE+LF+  +   D V+WN++I G     
Sbjct: 578 HSWAIKS--GWNSSVVSGALVDMYVKCGNIADAEMLFHE-SETRDQVAWNTIICGYSQHG 634

Query: 356 --------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI-GV 406
                   FK+M+    +    T + +L +C+    L  G+       K   S ++I G+
Sbjct: 635 HGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGR-------KYFKSLSSIYGI 687

Query: 407 NALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
              M  Y          G LV A SL+ ++    D+S W  ++ AC  + + + A +  +
Sbjct: 688 TPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAE 747

Query: 460 SMTQ-QQNASPDSVTLVNVISACGN 483
            + + + + +  S+ L N+ +  G 
Sbjct: 748 RLFELEPHDASSSILLSNIYADLGR 772



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 225/505 (44%), Gaps = 48/505 (9%)

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA    LR G+ +H   +R  L  D  +++SL++ Y K   L  A  +F+ + P  D+V+
Sbjct: 60  CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGM-PHRDIVA 118

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           W +MIS             +F  M       +  TL ++L +C+     +F   +H   +
Sbjct: 119 WTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVV 178

Query: 396 KL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           KL G  +  +G ++L+  Y +CG+L AA ++L  +   SD S WN ++    ++G ++  
Sbjct: 179 KLNGLDDPYVG-SSLVEAYTSCGELDAAETVLLGLPERSDVS-WNALLNGYARHGDYRRV 236

Query: 455 IKTFKSMTQQQNASPDSV---TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
           +   + +     AS D +   TL  V+  C  L LA  G+S+H   +K  +  D  + + 
Sbjct: 237 MIIIEKLV----ASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSC 292

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPN 568
           L+ MY RC   + A  VF      ++   + MIS F ++     AL+LF  +     +PN
Sbjct: 293 LVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPN 352

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
               V I    ++ G     + +H ++   GF     +  A+L+MY              
Sbjct: 353 HYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFD 412

Query: 618 ----KSNAAWSSMISAYGYHGKGWE-AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                   +W++++SA+ Y G   E  + +F +M   G    K + +S+L  C+    + 
Sbjct: 413 LIHEPDTFSWNTILSAF-YSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLR 471

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
            G Q +  +L+   ++ +T+    +VDM  +SG    A    + L  +     W  ++S 
Sbjct: 472 FGTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFSWTVIMSG 529

Query: 733 CSHHGDTKMGKQVAELLFKLEPENV 757
              +  T+  ++V E    +  EN+
Sbjct: 530 ---YAKTEEAEKVVEYFRSMLRENI 551



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 22/316 (6%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           A L  C    +L  G+ +H   L+     +T  +++L++MY  CG LV A  +   + H 
Sbjct: 55  AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  +I A T  G   +A+  F  M  Q+  +P+  TL +V+ AC     +     
Sbjct: 115 -DIVAWTAMISAHTAAGDSDQALDMFARM-NQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172

Query: 493 LHGLALKSLMGLDTR-VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           +HG  +K L GLD   V ++L+  Y  C ++ +A TV       +  +WN +++ ++++ 
Sbjct: 173 VHGQVVK-LNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231

Query: 552 AEVRALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              R + +   L    +EIS   + ++L  C +LG+ ++G+ +H  V   G + ++ ++S
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291

Query: 609 ALLDMYSNCKS-NAAW--------------SSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            L++MYS C S   A+              S+MIS +  H   WEA++LF +M   G++P
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351

Query: 654 TKSSVISLLSACSHSG 669
                + +    S +G
Sbjct: 352 NHYIFVGIAGVASRTG 367


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 192/598 (32%), Positives = 317/598 (53%), Gaps = 35/598 (5%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V ++  L+++Y   G++  A   F  +  +DV +WN +I G+   G   E         L
Sbjct: 86  VCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFML 145

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              ++PD  T  +++  C +   + +G  +H  A++    +D+ +  SL+  Y +  ++ 
Sbjct: 146 SSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVV 202

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS---QFSFSTLLAILPSCNSPE 382
            A +LF+ + P  D+ SWN+MISG       KE L L          T++++L +C    
Sbjct: 203 NARILFDEM-PTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAG 261

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
               G +IH + +K G  +     N L+ +Y   G L     +  R+ +  D   WN +I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRM-YVRDLISWNSII 320

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
            A   N     AI  F+ M +     PD +TL+++ S    L      +S+ G  L+   
Sbjct: 321 KAYELNEQPLRAILLFQEM-RLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGW 379

Query: 503 GL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
            L D  + NA++ MY +   + SA  VF    N ++ +WN +IS ++QN     A+E++ 
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYN 439

Query: 562 HLEFEPNEISI-----VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
            +E E  EIS      VS+L AC+Q G LR G ++HG +   G   + F+ ++L DMY  
Sbjct: 440 IMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGK 499

Query: 617 CK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C                ++  W+++I+ +G+HG G +A+ LF EM + G++P   + ++L
Sbjct: 500 CGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTL 559

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHSGLVDEG   +  M  +Y + P  +H+ C+VD+ GR+G+L+ A  FIK++P+QP
Sbjct: 560 LSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQP 619

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +WGA+LSAC  HG+  +GK  +E LF++EPE+VGY++ LSNMY + G+W+   EI
Sbjct: 620 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 677



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 186/666 (27%), Positives = 311/666 (46%), Gaps = 62/666 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+  + +H   + +  I +  +    VN+Y   G++  +  TF  +H  D  +WN ++SG
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126

Query: 149 CLHNNYPE---KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
                Y     +C   F  M  SG Q D  +  S + A      ++ G  IH L +K G+
Sbjct: 127 YGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACR---NVTDGNKIHCLALKFGF 181

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
               YV+   SLI +Y + G +  A   F  M  +D+ SWNA+I G+  +G  +EA  L 
Sbjct: 182 MWDVYVAA--SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             ++ M SV     TVV+L+S C ++     G ++H Y+I+  L  +L + N L+D Y++
Sbjct: 240 DGLRAMDSV-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             SL   + +F+ +  + DL+SWNS+I              LF+EM     Q    TL++
Sbjct: 295 FGSLKDCQKVFDRMY-VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLIS 353

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           +    +    +   +S+  + L+ G+   + TIG NA++ MY   G + +A ++   +  
Sbjct: 354 LASILSQLGEIRACRSVQGFTLRKGWFLEDITIG-NAVVVMYAKLGLVDSARAVFNWLP- 411

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA-SPDSVTLVNVISACGNLELAFEG 490
           N D   WN +I    QNG   EAI+ +  M ++    S +  T V+V+ AC       +G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
             LHG  LK+ + LD  V  +L  MYG+C  +  A ++F      N   WN +I+    +
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               +A+ LF+ +  E   P+ I+ V++LSAC+  G++  G+      F +  Q +  I+
Sbjct: 532 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW----CFEM-MQTDYGIT 586

Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
            +L            +  M+  YG  G+   A+     M    ++P  S   +LLSAC  
Sbjct: 587 PSL----------KHYGCMVDLYGRAGQLEIALNFIKSM---PLQPDASIWGALLSACRV 633

Query: 668 SGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGK---LQEAYEFIKNLPIQPKP 723
            G VD G     ++ E   V PE   +HV + +M   +GK   + E         ++  P
Sbjct: 634 HGNVDLGKIASEHLFE---VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTP 690

Query: 724 GVWGAM 729
           G W +M
Sbjct: 691 G-WSSM 695



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 160/595 (26%), Positives = 276/595 (46%), Gaps = 78/595 (13%)

Query: 35  NKDVVTWNAMITACVE---NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ 91
           N+DV  WN MI+       +  V+     F  M+  G++ D  T   ++ A   +     
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLF--MLSSGLQPDYRTFPSVLKACRNVT---D 168

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CL 150
           G  +HCL++K G + D  +    +++Y + G + ++   F  M   D  SWN ++SG C 
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 151 HNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             N  E   L    R M       D+V++ S ++A    G+ + G  IH+  IK G E  
Sbjct: 229 SGNAKEALTLSDGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +VS  N LI +Y++ G ++  ++ F  M  +D++SWN+II  + LN +   A  L  EM
Sbjct: 282 LFVS--NKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEM 339

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLMDFYSK 325
           +L R ++PD  T+++L S+ +    +R  RSV G+ +R+  G+   D+ + N+++  Y+K
Sbjct: 340 RLSR-IQPDCLTLISLASILSQLGEIRACRSVQGFTLRK--GWFLEDITIGNAVVVMYAK 396

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ------FSFSTL 371
              +  A  +FN + P  D++SWN++ISG  +        EM  +  +       +  T 
Sbjct: 397 LGLVDSARAVFNWL-PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTW 455

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           +++LP+C+   +L  G  +H   LK G   +     +L  MY  CG L  A SL  +I  
Sbjct: 456 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP- 514

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             ++  WN +I     +GH ++A+  FK M   +   PD +T V ++SAC +  L  EG+
Sbjct: 515 RVNSVPWNTLIACHGFHGHGEKAVMLFKEML-DEGVKPDHITFVTLLSACSHSGLVDEGE 573

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
               +               + T YG    +K                + CM+  + +  
Sbjct: 574 WCFEM---------------MQTDYGITPSLKH---------------YGCMVDLYGRAG 603

Query: 552 AEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-----HLGFQ 601
               AL   + +  +P+     ++LSAC   G +  GK    H+F     H+G+ 
Sbjct: 604 QLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 658



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 230/466 (49%), Gaps = 26/466 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +  + SL+  Y       ++  LF E   +D+ +WNAMI+   ++      L   
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL--- 236

Query: 62  GEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              + +G+R  DS T++ ++SA T+     +G  +H  SIK G+ ++  + N  +++YA+
Sbjct: 237 --TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L   +  F  M+  D +SWN+I+     N  P + +L F+EM  S  Q D ++L S 
Sbjct: 295 FGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISL 354

Query: 181 VAASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +  + LGE+   + +    ++ G+  ED   +++ N+++ MY++ G +++A   F  + 
Sbjct: 355 ASILSQLGEIRACRSVQGFTLRKGWFLED---ITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-RSVEPDIATVVTLISLCADSLLLREG 297
            KDV+SWN II G+A NG   EA ++ + M+     +  +  T V+++  C+ +  LR+G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
             +HG  ++  L  D+ +  SL D Y K   L  A  LF  I  +N  V WN++I+    
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNS-VPWNTLIACHGF 530

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTI 404
                    LFKEML    +    T + +L +C+    ++ G+      Q   G + +  
Sbjct: 531 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLK 590

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
               ++ +Y   G L  A + ++ +    D S W  ++ AC  +G+
Sbjct: 591 HYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636


>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
          Length = 906

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 233/762 (30%), Positives = 373/762 (48%), Gaps = 86/762 (11%)

Query: 92  GRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
            R +H L++KAG +A S ++    ++ Y + G L  +   F  M   D V WN +++ C 
Sbjct: 89  ARCLHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACS 148

Query: 151 HNNYPEKCLLYFREM---GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
                E   + FR M   G        V+++  V A A    L  G+ +H   +K G E 
Sbjct: 149 RRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLES 208

Query: 208 SPYVSVTNSLISMYSQCGDIEA---AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
                  N+L+SMY++CG       A RAF  + CKDVVSWN++I G+  N  F EA  L
Sbjct: 209 DTLCG--NALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALAL 266

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFY 323
             +M + +   P+ +TV +++ +C+ +   R  G+ VH + +R  +  D+ + N+LM  Y
Sbjct: 267 FSQM-ISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHY 325

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           SK   +   E +F ++  + D+VSWN++I+G            LF+ +L         + 
Sbjct: 326 SKVLEMKDVESIFTSM-DVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSF 384

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           +++L +C     ++ G  +H +  +      T  +NAL+  Y +C     AF     I  
Sbjct: 385 ISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDIL- 443

Query: 432 NSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQQQNASP-DSVTLVNVI---SACGNLEL 486
           N D+  WN ++ AC T   H ++       M +  N    DSVT++NVI   + CG +++
Sbjct: 444 NKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCG-IKM 502

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE--------------SC 532
             E    HG +L+     +T V NA++  Y +C     AS +F               SC
Sbjct: 503 VREA---HGWSLRVGYTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISC 559

Query: 533 Y---NC--------------NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y   NC              +L +WN MI  ++QN  + +A  LF HL+ E   P+ +SI
Sbjct: 560 YLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSI 619

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            +IL AC  L  ++  +Q H ++      E+  +  AL+D YS C               
Sbjct: 620 ANILEACIHLCSVQLVRQCHAYMLRASL-EDIHLEGALVDAYSKCGNITNAYNIFQISPK 678

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K    +++MI  Y  HG   EA+ELF +M    IRP    + +LLSACSH+GLVD G++ 
Sbjct: 679 KDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKI 738

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHH 736
           + ++ E + V P  EH+ C+VD+L RSG +Q+AY F  ++P        W ++L AC  H
Sbjct: 739 FKSIREIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANAWSSLLGACKVH 798

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           G  ++G+  A  LF +E  ++G Y+ +SN+Y A  +W D VE
Sbjct: 799 GKVEIGQLAAGRLFSMEGGDIGNYVIMSNIYAADEKW-DGVE 839



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 183/703 (26%), Positives = 321/703 (45%), Gaps = 86/703 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +++ AY        +L LF E    D V WN +ITAC            F  M+  G
Sbjct: 108 VAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCG 167

Query: 69  I---RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD-- 123
           +      + T+ +IV A  +   L+ GR VHC  +K G+ +D+   N  V+MYAKCG   
Sbjct: 168 VGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSR 227

Query: 124 -LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +   FS + C D VSWN++++G + N    + L  F +M   G    N S  +++ 
Sbjct: 228 VMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQG-YLPNYSTVASIL 286

Query: 183 ASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
                 E    +GK +H+  ++ G E    VSV+N+L++ YS+  +++  E  F  M  +
Sbjct: 287 PVCSFTEFGRHHGKEVHSFVVRHGMEID--VSVSNALMTHYSKVLEMKDVESIFTSMDVR 344

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWN II G+ +NG    A  L   + L   + PD  + ++L++ CA    ++ G  V
Sbjct: 345 DIVSWNTIIAGYVMNGYHHRALGLFQGL-LSTGIAPDSVSFISLLTACAQVGDVKTGMEV 403

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HGY  +R +  +  +MN+L+ FYS  +    A   F  I    D +SWN+++S       
Sbjct: 404 HGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILN-KDSISWNAILSACATSEQ 462

Query: 355 ----LFKEMLYLCS-----QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                F  M  +C      Q+   T+L ++   ++   ++  +  H W L++G++  T  
Sbjct: 463 HIEKFFVLMSEMCRGVNQCQWDSVTVLNVI-HMSTFCGIKMVREAHGWSLRVGYTGETSV 521

Query: 406 VNALMHMYINCGDLVAAFSLLQR------ISHNSDTSC---------------------- 437
            NA++  Y+ CG    A  L +       ++ N   SC                      
Sbjct: 522 ANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDL 581

Query: 438 --WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN++I    QN    +A   F  + Q +   PD V++ N++ AC +L      +  H 
Sbjct: 582 TSWNLMIQLYAQNDMDGQAFSLFNHL-QSEGLKPDIVSIANILEACIHLCSVQLVRQCHA 640

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             L++ +  D  ++ AL+  Y +C +I +A  +F+     +L T+  MI  ++ +     
Sbjct: 641 YMLRASLE-DIHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEE 699

Query: 556 ALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-------------- 598
           A+ELF     L+  P+ + + ++LSAC+  G++  G +I   +  +              
Sbjct: 700 AVELFSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACMV 759

Query: 599 ------GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
                 G  +++++ +  LDM  +  +  AWSS++ A   HGK
Sbjct: 760 DLLARSGHIQDAYMFA--LDMPPHAVNANAWSSLLGACKVHGK 800



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 196/435 (45%), Gaps = 52/435 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  S +L+T YS V   +   ++F     +D+V+WN +I   V N      L  F
Sbjct: 310 GMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLF 369

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             ++  GI  DS + + +++A  Q+  +K G  VH    +  ++ ++SL N  V  Y+ C
Sbjct: 370 QGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHC 429

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGC-LHNNYPEKCLLYFREM--GWSGEQADNVSLS 178
              + +   F+ +   D++SWN I+S C     + EK  +   EM  G +  Q D+V++ 
Sbjct: 430 DRFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVL 489

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD------------ 226
           + +  S   G +   +  H   +++GY  +   SV N+++  Y +CG             
Sbjct: 490 NVIHMSTFCG-IKMVREAHGWSLRVGY--TGETSVANAILDAYVKCGYSHDASILFRNHA 546

Query: 227 -------------------IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
                              IE AE  F  M  KD+ SWN +I  +A N    +AF L + 
Sbjct: 547 GRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNH 606

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           +Q    ++PDI ++  ++  C     ++  R  H Y +R  L  D+ +  +L+D YSK  
Sbjct: 607 LQ-SEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASL-EDIHLEGALVDAYSKCG 664

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAIL 375
           +++ A  +F  I+P  DLV++ +MI              LF +ML L  +     L  +L
Sbjct: 665 NITNAYNIFQ-ISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLL 723

Query: 376 PSCNSPESLEFGKSI 390
            +C+    ++ G  I
Sbjct: 724 SACSHAGLVDAGIKI 738



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 43/333 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L       +L+T YS+   F+ +   F +  NKD ++WNA+++AC  +   +    F
Sbjct: 410 RPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIE--KF 467

Query: 61  FGEMVE--EGI---RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           F  M E   G+   ++DS T+L ++  ++    +K  R  H  S++ G   ++S+ N  +
Sbjct: 468 FVLMSEMCRGVNQCQWDSVTVLNVIH-MSTFCGIKMVREAHGWSLRVGYTGETSVANAIL 526

Query: 116 NMYAKCGD-------------------------------LNSSECTFSGMHCADTVSWNT 144
           + Y KCG                                +  +E  F+ M   D  SWN 
Sbjct: 527 DAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNL 586

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           ++     N+   +    F  +   G + D VS+++ + A   L  +   +  HA  ++  
Sbjct: 587 MIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRAS 646

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            ED   + +  +L+  YS+CG+I  A   F     KD+V++ A+I  +A++G  EEA +L
Sbjct: 647 LED---IHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVEL 703

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +M L   + PD   + TL+S C+ + L+  G
Sbjct: 704 FSKM-LKLDIRPDHVVLTTLLSACSHAGLVDAG 735



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 112/256 (43%), Gaps = 6/256 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           + T   +++ Y   +  E +  +F     KD+ +WN MI    +N         F  +  
Sbjct: 550 IVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQS 609

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG++ D  ++  I+ A   +  ++  R  H   ++A +  D  L    V+ Y+KCG++ +
Sbjct: 610 EGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASL-EDIHLEGALVDAYSKCGNITN 668

Query: 127 SECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F      D V++ T M GC   +   E+ +  F +M     + D+V L++ ++A +
Sbjct: 669 AYNIFQISPKKDLVTF-TAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACS 727

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV--V 243
             G +  G  I    I+  +   P       ++ + ++ G I+ A      M    V   
Sbjct: 728 HAGLVDAGIKIFK-SIREIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNAN 786

Query: 244 SWNAIIDGFALNGKFE 259
           +W++++    ++GK E
Sbjct: 787 AWSSLLGACKVHGKVE 802


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 226/760 (29%), Positives = 388/760 (51%), Gaps = 62/760 (8%)

Query: 51  NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
            R V   L+F+   ++E +               Q   L +G+ VH     A    D  L
Sbjct: 44  KRGVQANLNFYARRLQECV---------------QAKSLAEGKKVHDHMRSAQFEPDIYL 88

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSG 169
            N+ ++MY+KCG +  +   F  M   D VSWN ++SG  LH    E   L++ +M   G
Sbjct: 89  NNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFY-QMQREG 147

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + +  S  S ++A      L +G+ IH+   K GYE    V+V+ +LI+MY +CG +E 
Sbjct: 148 LKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESD--VNVSTALINMYCKCGSLEL 205

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLC 288
           A + F  M  ++VVSW A+I G+  +G  +EAF L    +L+RS  +P+  +  +++  C
Sbjct: 206 ARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQ--KLIRSGTQPNKVSFASILGAC 263

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
            +   L +G  +H Y  +  L  ++L+ N+L+  Y++  SL+ A  +F+ +   N  VSW
Sbjct: 264 TNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNR-VSW 322

Query: 349 NSMISG-----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           N+MI+G           LF++M    +   +F++++LLAI   C     L  GK +H   
Sbjct: 323 NAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAI---CADRADLNRGKELHSQI 379

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++  +  +     AL+ MY  CG L  A  +  ++   +  S WN  I  C ++G  +EA
Sbjct: 380 VRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVS-WNAFIACCCRHGSEKEA 438

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
            + FK M ++ +  PD VT + ++++C + E    G+ +HG   +  M  +  V NALI+
Sbjct: 439 FQVFKQM-RRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALIS 497

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           MYGRC  +  A  VF      +L +WN MI+A+ Q+ A   A +LF   + E    ++ +
Sbjct: 498 MYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYT 557

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
            +++L A   L  L  G++IHG V   G +++  I + L+ MYS C              
Sbjct: 558 FINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ 617

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
            K    W++M++AY +   G +A++LF +M   G+ P  ++  S+L+AC+  G ++ G +
Sbjct: 618 EKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK 677

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           ++   L+E  +  +T H+ C+V  LGR+  L+EA EFI+ +  +    +W ++L AC  H
Sbjct: 678 FHTQ-LKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIH 736

Query: 737 GDTKMGKQVAELLFKLEPENVGYYI-SLSNMYVALGRWKD 775
            +  + +   E L  ++ ++       L N+Y A GRW+D
Sbjct: 737 HNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWED 776



 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 189/595 (31%), Positives = 303/595 (50%), Gaps = 22/595 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L++ YS     E +  +F    +KDVV+WNAMI+    +      +  F +M  EG++ +
Sbjct: 92  LISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPN 151

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             + + I+SA      L+ G  +H    KAG  +D ++    +NMY KCG L  +   F+
Sbjct: 152 QNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFN 211

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW  ++SG + +   ++  + F+++  SG Q + VS +S + A     +L  
Sbjct: 212 EMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQ 271

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +HA   + G E    V V N+LISMY++CG +  A + F  +   + VSWNA+I G+
Sbjct: 272 GLKLHAYIKQAGLEQE--VLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY 329

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
              G  EEAF L  +MQ  +  +PD  T  +L+++CAD   L  G+ +H   +R     D
Sbjct: 330 G-EGFMEEAFRLFRDMQ-QKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEAD 387

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFS 367
           + +  +L+  Y+K  SL +A  +FN + P  + VSWN+ I+     G  KE   +  Q  
Sbjct: 388 VTVATALISMYAKCGSLEEARKVFNQM-PEKNAVSWNAFIACCCRHGSEKEAFQVFKQMR 446

Query: 368 FS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T + +L SC SPE  E G+ IH    + G  +N +  NAL+ MY  CG L 
Sbjct: 447 RDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLA 506

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +  RI    D   WN +I A  Q+G    A   F    + +    D  T +NV+ A
Sbjct: 507 DAREVFYRI-RRRDLGSWNAMIAAYVQHGANGSAFDLFIKY-KSEGGKGDKYTFINVLRA 564

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
             NLE    G+ +HGL  K+ +  D R+   LI MY +C  ++ A +VF++    ++  W
Sbjct: 565 IANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCW 624

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIH 592
           N M++A++ +     AL+LF+ +  E   P+  +  S+L+AC +LG + HGK+ H
Sbjct: 625 NAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFH 679



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 182/627 (29%), Positives = 315/627 (50%), Gaps = 52/627 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ GK +H       +E  P + + N LISMYS+CG IE A   F  M  KDVVSWNA+I
Sbjct: 67  LAEGKKVHDHMRSAQFE--PDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMI 124

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+AL+G+ +EA DL ++MQ    ++P+  + ++++S C   ++L  G  +H +  +   
Sbjct: 125 SGYALHGRGQEAVDLFYQMQ-REGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGY 183

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+ +  +L++ Y K  SL  A  +FN +   N +VSW +MISG            LF+
Sbjct: 184 ESDVNVSTALINMYCKCGSLELARKVFNEMRERN-VVSWTAMISGYVQHGDSKEAFVLFQ 242

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +++   +Q +  +  +IL +C +P  LE G  +H +  + G     +  NAL+ MY  CG
Sbjct: 243 KLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCG 302

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A  +   +   +  S WN +I    + G  +EA + F+ M QQ+   PD  T  ++
Sbjct: 303 SLANARQVFDNLRSPNRVS-WNAMIAGYGE-GFMEEAFRLFRDM-QQKGFQPDRFTYASL 359

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++ C +      GK LH   +++    D  V  ALI+MY +C  ++ A  VF      N 
Sbjct: 360 LAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNA 419

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN  I+   ++ +E  A ++F+ +  +   P+ ++ +++L++CT       G+ IHG 
Sbjct: 420 VSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGK 479

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           +   G   N+ +++AL+ MY  C               +   +W++MI+AY  HG    A
Sbjct: 480 IDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSA 539

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
            +LF +  + G +  K + I++L A ++   +D G + +  ++E+  +  +      ++ 
Sbjct: 540 FDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIH-GLVEKAGLEKDIRILTTLIK 598

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLEPENV- 757
           M  + G L++AY   KN  +Q K  V W AML+A +H   +  G+   +L  ++  E V 
Sbjct: 599 MYSKCGSLRDAYSVFKN--VQEKDVVCWNAMLAAYNH---SDHGQDALKLFQQMRLEGVN 653

Query: 758 ---GYYISLSNMYVALGRWKDAVEIGK 781
                Y S+ N    LG    A+E GK
Sbjct: 654 PDSATYTSVLNACARLG----AIEHGK 676



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 263/536 (49%), Gaps = 19/536 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + +  ST+L+  Y      E +  +F E   ++VV+W AMI+  V++         F
Sbjct: 182 GYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLF 241

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++  G + +  +   I+ A T  N L+QG  +H    +AG+  +  + N  ++MYA+C
Sbjct: 242 QKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARC 301

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F  +   + VSWN +++G     + E+    FR+M   G Q D  + +S +
Sbjct: 302 GSLANARQVFDNLRSPNRVSWNAMIAG-YGEGFMEEAFRLFRDMQQKGFQPDRFTYASLL 360

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A  A   +L+ GK +H+  ++  +E    V+V  +LISMY++CG +E A + F  M  K+
Sbjct: 361 AICADRADLNRGKELHSQIVRTAWEAD--VTVATALISMYAKCGSLEEARKVFNQMPEKN 418

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWNA I     +G  +EAF +  +M+    V PD  T +TL++ C        GR +H
Sbjct: 419 AVSWNAFIACCCRHGSEKEAFQVFKQMR-RDDVIPDHVTFITLLNSCTSPEDFERGRYIH 477

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G   +  +  + L+ N+L+  Y +   L+ A  +F  I    DL SWN+MI+        
Sbjct: 478 GKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAAYVQHGAN 536

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +      +    T + +L +  + E L+ G+ IH    K G   +   +  L
Sbjct: 537 GSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTL 596

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A+S+ + +    D  CWN ++ A   + H Q+A+K F+ M + +  +P
Sbjct: 597 IKMYSKCGSLRDAYSVFKNV-QEKDVVCWNAMLAAYNHSDHGQDALKLFQQM-RLEGVNP 654

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           DS T  +V++AC  L     GK  H    ++ M  DTR    ++   GR   +K A
Sbjct: 655 DSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEA 710



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 3/348 (0%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A +  +T+L++ Y+     E +  +F +   K+ V+WNA I  C  +         F +M
Sbjct: 386 ADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQM 445

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             + +  D  T + ++++ T     ++GR +H    + GM++++ + N  ++MY +CG L
Sbjct: 446 RRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKL 505

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F  +   D  SWN +++  + +         F +    G + D  +  + + A 
Sbjct: 506 ADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAI 565

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L +L  G+ IH L  K G E    + +  +LI MYS+CG +  A   F  +  KDVV 
Sbjct: 566 ANLEDLDAGRKIHGLVEKAGLEKD--IRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVC 623

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WNA++  +  +   ++A  L  +M+L   V PD AT  ++++ CA    +  G+  H   
Sbjct: 624 WNAMLAAYNHSDHGQDALKLFQQMRL-EGVNPDSATYTSVLNACARLGAIEHGKKFHTQL 682

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               +  D      ++    +++ L +AE     I+  +D + W S++
Sbjct: 683 KEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLL 730


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 199/651 (30%), Positives = 338/651 (51%), Gaps = 39/651 (5%)

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           LL +  M  +    D  +  S V A   L   S+G   H   I  GY    Y++   SLI
Sbjct: 33  LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIA--TSLI 90

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           + YS+ G  ++A + F  M  ++VV W  +I  +   G+ + AF + + M+  + ++P  
Sbjct: 91  NFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMR-RQGIQP-- 147

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            + VT++ L +  L L   + +H   I+   G D+ + NS+++ Y K   +  A+ LF  
Sbjct: 148 -SSVTMLGLLSGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE- 205

Query: 339 IAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEF 386
           +    D++SWNS++SG       +E+L L  +           T  +++ +      L  
Sbjct: 206 LMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGV 265

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK +H   L+ G   ++    +L+ MY+ CG++ +AF + + + H  D   W  +I    
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK-DVISWTAMISGLV 324

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           QN     A+  F+ M + +   P + T+ +V++AC  L     G S+HG  L+  + LD 
Sbjct: 325 QNDCADMAVTVFRRMLKSR-VMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDI 383

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHL 563
             QN+L+TMY +C  ++ + +VF+     ++ +WN ++S  +QN    +AL LF   R  
Sbjct: 384 PSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKA 443

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              P+ I++VS+L AC  +G L  GK IH  V          I +AL+DMYS C      
Sbjct: 444 RQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSA 503

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    +   +WSS+I+ YG HGKG  A+ ++ +  ++GI+P     +S+LSACSH+
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHN 563

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GLVD+GL ++++M +++ + P  EH  CIVD+L R+G+++EAY F K +  +P   V G 
Sbjct: 564 GLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGI 623

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +L AC   G+ ++G  VA  +  L+P N G Y+ L++ Y ++ RW    E+
Sbjct: 624 LLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEV 674



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 262/538 (48%), Gaps = 24/538 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +TSL+  YS   + +S+  +F    +++VV W  MI          +    +  M  +GI
Sbjct: 86  ATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGI 145

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           +  S T+L ++S + ++  L+    +H   I+ G  +D +L N  +N+Y KCG +  ++ 
Sbjct: 146 QPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQA 202

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D +SWN+++SG        + L     M   G + D  +  S V+A+A   +
Sbjct: 203 LFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSK 262

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK++H   ++ G E   ++    SLI MY +CG++ +A R F GM  KDV+SW A+I
Sbjct: 263 LGVGKMVHGHILRAGLEQDSHIE--TSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMI 320

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   N   + A  +   M L   V P  AT+ ++++ CA+      G SVHGY +R+ +
Sbjct: 321 SGLVQNDCADMAVTVFRRM-LKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRI 379

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+   NSL+  Y+K   L ++  +F+ ++   D+VSWN+++SG            LF 
Sbjct: 380 KLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS-RRDIVSWNAIVSGHAQNGHLCKALLLFN 438

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           EM     +    T++++L +C S  +L  GK IH +  K       +   AL+ MY  CG
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCG 498

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL +A     R+    D   W+ +I     +G  + A++ +          P+ V  +++
Sbjct: 499 DLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGETALRMYSDFL-HTGIQPNHVIYLSI 556

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRCRDIKSASTVFESCY 533
           +SAC +  L  +G S      K   G++ R+++   ++ +  R   ++ A + ++  +
Sbjct: 557 LSACSHNGLVDQGLSFFHSMTKDF-GIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMF 613



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 17/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  + S+L  Y      E + ALF     +DV++WN++++   +   +   L   
Sbjct: 176 GFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLL 235

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +GI  D  T   +VSA    + L  G++VH   ++AG+  DS +    + MY KC
Sbjct: 236 IRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC 295

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++NS+   F GM   D +SW  ++SG + N+  +  +  FR M  S       +++S +
Sbjct: 296 GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVL 355

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA A LG    G  +H  G  L       +   NSL++MY++CG +E +   F  M+ +D
Sbjct: 356 AACAELGSFPLGTSVH--GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRD 413

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNAI+ G A NG   +A  L +EM+  R   PD  TVV+L+  CA    L +G+ +H
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ-RPDSITVVSLLQACASIGALHQGKWIH 472

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +  +  LG  +L+  +L+D YSK   L  A+  F+ + P  DLVSW+S+I+G       
Sbjct: 473 NFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRM-PQQDLVSWSSIIAGYGSHGKG 531

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNA 408
                ++ + L+   Q +    L+IL +C+    ++ G S  H      G          
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G +  A+S  +R+          I++ AC   G+ +
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVE 635


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 213/725 (29%), Positives = 358/725 (49%), Gaps = 44/725 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G  +H   +K+G +A  S  N  ++ Y+KC     +   F  +     VSW+++++ 
Sbjct: 20  LLPGAHLHASLLKSGSLA--SFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTA 77

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             +N  P   +  F  M   G   +  +L   +    C+ +   G  +HA+ +  G+   
Sbjct: 78  YSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK---CVPDARLGAQVHAMAMATGFGSD 134

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            +V+  N+L++MY   G ++ A R F    + ++ VSWN ++  +  N +  +A  +  E
Sbjct: 135 VFVA--NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   ++P       +++ C  S  +  GR VH   +R     D+   N+L+D Y K  
Sbjct: 193 M-VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A ++F  + P +D+VSWN++ISG            L  +M Y     +  TL +IL
Sbjct: 252 RVDIASVIFEKM-PDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSIL 310

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+   + + G+ IH + +K    S++ IGV  L+ MY     L  A  +   + H   
Sbjct: 311 KACSGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFLDDARKVFDWMFHRDL 369

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             C N +I  C+  G   EA+  F  + +++    +  TL  V+ +  +LE A   + +H
Sbjct: 370 ILC-NALISGCSHGGRHDEALSLFYEL-RKEGLGVNRTTLAAVLKSTASLEAASTTRQVH 427

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            LA+K     D  V N LI  Y +C  +  A+ VFE C + ++     MI+A SQ     
Sbjct: 428 ALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGE 487

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A++LF  +     EP+   + S+L+AC  L     GKQ+H H+    F  ++F  +AL+
Sbjct: 488 GAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALV 547

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
             Y+ C               +   +WS+MI     HG G  A+ELF  M + GI P   
Sbjct: 548 YTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHI 607

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           ++ S+L AC+H+GLVDE  +Y+N+M E + +    EH+ C++D+LGR+GKL +A E + +
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNS 667

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P Q    +WGA+L A   H D ++GK  AE LF LEPE  G ++ L+N Y + G W + 
Sbjct: 668 MPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEV 727

Query: 777 VEIGK 781
            ++ K
Sbjct: 728 AKVRK 732



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 183/672 (27%), Positives = 310/672 (46%), Gaps = 57/672 (8%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDV--------------VTWNAMITACVE 50
           AHL  S   L    +++ F + L  FY  C +                V+W++++TA   
Sbjct: 24  AHLHAS---LLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 51  NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           N      +  F  M  EG+  +   L +++  +      + G  VH +++  G  +D  +
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFV 137

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
            N  V MY   G ++ +   F+      + VSWN +MS  + N+     +  F EM WSG
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            Q      S  V A      +  G+ +HA+ +++GY+   + +  N+L+ MY + G ++ 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA--NALVDMYMKMGRVDI 255

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M   DVVSWNA+I G  LNG    A +LL +M+    V P++ T+ +++  C+
Sbjct: 256 ASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV-PNVFTLSSILKACS 314

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            +     GR +HG+ I+     D  +   L+D Y+K++ L  A  +F+ +    DL+  N
Sbjct: 315 GAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF-HRDLILCN 373

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++ISG            LF E+       + +TL A+L S  S E+    + +H   +K+
Sbjct: 374 ALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKI 433

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF  +   VN L+  Y  C  L  A  + +  S     +C ++ I A +Q  H + AIK 
Sbjct: 434 GFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSM-ITALSQCDHGEGAIKL 492

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  M  ++   PD   L ++++AC +L    +GK +H   +K     D    NAL+  Y 
Sbjct: 493 FMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYA 551

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
           +C  I+ A   F S     + +W+ MI   +Q+    RALELF  +  E   PN I++ S
Sbjct: 552 KCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTS 611

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L AC   G++   K+                 +++ +M+   ++   +S MI   G  G
Sbjct: 612 VLCACNHAGLVDEAKRYF---------------NSMKEMFGIDRTEEHYSCMIDLLGRAG 656

Query: 635 KGWEAIELFHEM 646
           K  +A+EL + M
Sbjct: 657 KLDDAMELVNSM 668



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 275/588 (46%), Gaps = 30/588 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF + +  + +L+  Y    + + +  +F E    ++ V+WN +++A V+N      +  
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEMV  GI+        +V+A T    ++ GR VH + ++ G   D    N  V+MY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  M  +D VSWN ++SGC+ N +  + +    +M +SG   +  +LSS 
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +  G    G+ IH   IK   +   Y+ V   L+ MY++   ++ A + F  M  +
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGV--GLVDMYAKNHFLDDARKVFDWMFHR 367

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++  NA+I G +  G+ +EA  L +E++    +  +  T+  ++   A        R V
Sbjct: 368 DLILCNALISGCSHGGRHDEALSLFYELR-KEGLGVNRTTLAAVLKSTASLEAASTTRQV 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H  A++    +D  ++N L+D Y K + LS A  +F   +   D+++  SMI+       
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS-GDIIACTSMITALSQCDH 485

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EML    +     L ++L +C S  + E GK +H   +K  F ++    NA
Sbjct: 486 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 545

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L++ Y  CG   D   AFS L           W+ +I    Q+GH + A++ F  M   +
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLP----ERGVVSWSAMIGGLAQHGHGKRALELFGRMV-DE 600

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
             +P+ +T+ +V+ AC +  L  E K     ++K + G+D   ++   +I + GR   + 
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFN-SMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
            A  +  S  +  N   W  ++ A   +K  E+  L   +    EP +
Sbjct: 660 DAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 2/158 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F++      +L+  Y+     E +   F     + VV+W+AMI    ++      L  
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FG MV+EGI  +  T+  ++ A      + +  R  + +    G+       +  +++  
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           + G L+ + E   S    A+   W  ++     +  PE
Sbjct: 654 RAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPE 691


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 194/645 (30%), Positives = 331/645 (51%), Gaps = 40/645 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G + +  +  S + A     +L  GK +H + +  G++   +V+  NSL+ +Y++CG   
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVA--NSLVILYAKCGGFG 62

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A   F  +  + VVSWNA+   +  +    EA  L H+M ++  + P+  ++ ++I++C
Sbjct: 63  DARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDM-VLSGIRPNEFSLSSMINVC 121

Query: 289 ADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
                  +GR +HGY I+  LGYD      N+L+D Y+K   L  A  +F+ IA   D+V
Sbjct: 122 TGLEDSVQGRKIHGYLIK--LGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK-PDIV 178

Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           SWN++I+G            L +EM       +  TL + L +C      E G+ +H   
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K+   +++     L+ MY  C  +  A  L+ ++    D   WN VI   +QN   +EA
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDA-RLVFKLMPERDMIAWNAVISGHSQNEEDEEA 297

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
              F  M   +    +  TL  V+ +   L+  +  + +H L+LKS    D  V N+LI 
Sbjct: 298 ASLFPLM-HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLID 356

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEIS 571
            YG+C  ++ A+ VFE     +L  +  +++A++Q+     AL L+  ++    +P+   
Sbjct: 357 TYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFV 416

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
             S+L+AC  L     GKQ+H H+   GF  + F  ++L++MY+ C              
Sbjct: 417 CSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
            +   +WS+MI     HG G EA++LF +M   G+ P   +++S+L AC+H+GLV E   
Sbjct: 477 VRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKH 536

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           Y+N+M   + + P  EH+ C++D+LGR+GKL+ A E +  +P Q    VWGA+L A   H
Sbjct: 537 YFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIH 596

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +  +G+Q AE+L  LEPE  G ++ L+N+Y ++G W     + +
Sbjct: 597 KNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRR 641



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 189/680 (27%), Positives = 318/680 (46%), Gaps = 52/680 (7%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI+ +      ++ A T    L  G+ VH + +  G  +D  + N  V +YAKCG    +
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +     VSWN + S  +H++   + +  F +M  SG + +  SLSS +     L
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +   G+ IH   IKLGY+   + +  N+L+ MY++ G +E A   F  +   D+VSWNA
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSA--NALVDMYAKVGILEDASSVFDEIAKPDIVSWNA 182

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II G  L+     A +LL EM     + P++ T+ + +  CA   L   GR +H   I+ 
Sbjct: 183 IIAGCVLHEYHHRALELLREMN-KSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKM 241

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +G D  +   L+D YSK NS+  A L+F  + P  D+++WN++ISG            L
Sbjct: 242 DMGSDSFLGVGLIDMYSKCNSMDDARLVFK-LMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  M      F+ +TL  +L S  + ++    + IH   LK GF  +   VN+L+  Y  
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG +  A  + +  S   D   +  ++ A  Q+G  +EA++ +  M Q +   PDS    
Sbjct: 361 CGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEM-QDRGIKPDSFVCS 418

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           ++++AC +L    +GK +H   LK     D    N+L+ MY +C  I+ AS  F      
Sbjct: 419 SLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR 478

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
            + +W+ MI   +Q+     AL+LF+ +      PN I++VS+L AC   G++   K   
Sbjct: 479 GIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK--- 535

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            H F           +++  ++        ++ MI   G  GK   A+EL ++M      
Sbjct: 536 -HYF-----------NSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKM------ 577

Query: 653 PTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSG--- 705
           P +++ +   +LL A      +D G Q    +L    + PE    HV + ++    G   
Sbjct: 578 PFQANALVWGALLGAARIHKNIDLGEQAAEMLLA---LEPEKSGTHVLLANIYASVGMWD 634

Query: 706 KLQEAYEFIKNLPIQPKPGV 725
           K+      +K+  ++ +PG+
Sbjct: 635 KVARVRRLMKDGKVKKEPGM 654



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 165/571 (28%), Positives = 284/571 (49%), Gaps = 34/571 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    + SL+  Y+    F  + +LF    ++ VV+WNA+ +  V +      +  F
Sbjct: 40  GFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLF 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +MV  GIR +  +L  +++  T +    QGR +H   IK G  +D+   N  V+MYAK 
Sbjct: 100 HDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKV 159

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   D VSWN I++GC+ + Y  + L   REM  SG   +  +LSSA+
Sbjct: 160 GILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSAL 219

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +     G+ +H+  IK+      ++ V   LI MYS+C  ++ A   F  M  +D
Sbjct: 220 KACAGMALRELGRQLHSSLIKMDMGSDSFLGV--GLIDMYSKCNSMDDARLVFKLMPERD 277

Query: 242 VVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           +++WNA+I G + N + EEA   F L+H   +  + +  ++TV+  I+    + + R+  
Sbjct: 278 MIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN-QTTLSTVLKSIAALQANYMCRQ-- 334

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
            +H  +++    +D  ++NSL+D Y K   +  A  +F   +P+ DLV + S+++   ++
Sbjct: 335 -IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQD 392

Query: 359 -------MLYLCSQ--------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                   LYL  Q        F  S+LL    +C S  + E GK +H   LK GF ++ 
Sbjct: 393 GQGEEALRLYLEMQDRGIKPDSFVCSSLLN---ACASLSAYEQGKQVHVHILKFGFMSDI 449

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              N+L++MY  CG +  A     RI      S W+ +I    Q+G+ +EA++ FK M  
Sbjct: 450 FAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS-WSAMIGGLAQHGYGKEALQLFKQML- 507

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRD 521
           +    P+ +TLV+V+ AC +  L  E K     ++K L G++   ++   +I + GR   
Sbjct: 508 KVGVPPNHITLVSVLCACNHAGLVAEAKHYFN-SMKILFGIEPMQEHYACMIDLLGRAGK 566

Query: 522 IKSA-STVFESCYNCNLCTWNCMISAFSQNK 551
           +++A   V +  +  N   W  ++ A   +K
Sbjct: 567 LEAAMELVNKMPFQANALVWGALLGAARIHK 597


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 228/812 (28%), Positives = 389/812 (47%), Gaps = 82/812 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +       L+  Y+     + +  +F      D + W +MI            L  F
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G   D  T + I+S L  M                                   
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASM----------------------------------- 274

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +      +    TV+WN ++S    +    +    +++M   G      + +S +
Sbjct: 275 GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASML 334

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+A +     G+ IHA  +K G + + +V   +SLI++Y + G I  A++ F   T K+
Sbjct: 335 SAAASMTAFDEGQQIHAAAVKHGLDANVFVG--SSLINLYVKHGCISDAKKVFDFSTEKN 392

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V WNA++ GF  N   EE   +   M+    +E D  T V+++  C +   L  GR VH
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMR-RADLEADDFTFVSVLGACINLDSLDIGRQVH 451

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF----- 356
              I+  +  DL + N+++D YSK  ++  A+ LF+ I P  D VSWN++I GL      
Sbjct: 452 CITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI-PGKDSVSWNALIVGLAHNEEE 510

Query: 357 KEMLYLCSQF----------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIG 405
           +E +Y+  +           SF+T    + +C++  + E GK IHC  +K    SN+ +G
Sbjct: 511 EEAVYMLKRMKCYGIAPDEVSFAT---AINACSNIRATETGKQIHCASIKYNVCSNHAVG 567

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            ++L+ +Y   GD+ ++  +L  +  +S     N +I    QN    EAI+ F+ + +  
Sbjct: 568 -SSLIDLYSKFGDVESSRKVLAHVDASSMVPI-NALITGLVQNNREDEAIELFQQVLKD- 624

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKS 524
              P + T  +++S C     +  GK +H   LKS L+  DT +  +L+ +Y +C+ ++ 
Sbjct: 625 GFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLED 684

Query: 525 ASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACT 580
           A+ +  E   + NL  W   IS ++QN    ++L +F   R  +   +E +  S+L AC+
Sbjct: 685 ANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACS 744

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN-AAWS 624
           ++  L  GK+IHG +   GF      +SAL+DMYS C               K N   W+
Sbjct: 745 EIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWN 804

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           SMI  +  +G   EA+ LF +M  S ++P + +++ +L ACSH+GL+ EG   +++M + 
Sbjct: 805 SMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQV 864

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           Y + P  +H+ C++D+LGR G LQEA E I  LP +    +W   L+AC  H D + GK 
Sbjct: 865 YGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKV 924

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
            A+ L ++EP+    Y+ LS+++ A G W +A
Sbjct: 925 AAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEA 956



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/699 (24%), Positives = 322/699 (46%), Gaps = 76/699 (10%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGDLNSSECT 130
           D   L +++SA +++  L+QGR VHC  +K+G  + S+ C    V+MYAKC ++  +   
Sbjct: 159 DQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS-SAFCQAGLVDMYAKCVEVKDARRV 217

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+ C DT+ W ++++G       ++ L  F  M   G   D V+              
Sbjct: 218 FDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVT-------------- 263

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
                              YV++ ++L SM    G +  A      +     V+WNA+I 
Sbjct: 264 -------------------YVTIISTLASM----GRLSDARTLLKRIQMPSTVAWNAVIS 300

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            ++ +G   E F L  +M+  + + P  +T  +++S  A      EG+ +H  A++  L 
Sbjct: 301 SYSQSGLESEVFGLYKDMK-RQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLD 359

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + +SL++ Y K   +S A+ +F+  +   ++V WN+M+ G            +F+ 
Sbjct: 360 ANVFVGSSLINLYVKHGCISDAKKVFD-FSTEKNIVMWNAMLYGFVQNDLQEETIQMFQY 418

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T +++L +C + +SL+ G+ +HC  +K     +    NA++ MY   G 
Sbjct: 419 MRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGA 478

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A +L   I    D+  WN +IV    N   +EA+   K M +    +PD V+    I
Sbjct: 479 IDVAKALFSLIP-GKDSVSWNALIVGLAHNEEEEEAVYMLKRM-KCYGIAPDEVSFATAI 536

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC N+     GK +H  ++K  +  +  V ++LI +Y +  D++S+  V       ++ 
Sbjct: 537 NACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMV 596

Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
             N +I+   QN  E  A+ELF+ +    F+P+  +  SILS CT       GKQ+H + 
Sbjct: 597 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYT 656

Query: 596 FHLG-FQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWE 638
                  +++ +  +L+ +Y  C                K+   W++ IS Y  +G   +
Sbjct: 657 LKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQ 716

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           ++ +F  M +  +R  +++  S+L ACS    + +G + +  +++   V  ET     ++
Sbjct: 717 SLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASA-LM 775

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           DM  + G +  ++E  K L  +     W +M+   + +G
Sbjct: 776 DMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNG 814



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 146/637 (22%), Positives = 269/637 (42%), Gaps = 83/637 (13%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA--IIDGF 252
           V+HA  ++LG      +   ++L+ +Y + G +  A RA    T        A  ++   
Sbjct: 77  VLHARVLRLGLPLRGRLG--DALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCH 134

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A +G   +  D    ++      PD   +  ++S C+    L +GR VH   ++      
Sbjct: 135 ARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSS 194

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL 372
                 L+D Y+K   +  A  +F+ IA   D + W SMI+G  +   Y  +   FS + 
Sbjct: 195 AFCQAGLVDMYAKCVEVKDARRVFDGIA-CPDTICWASMIAGYHRVGRYQQALALFSRM- 252

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
                                  K+G + + +    ++    + G L  A +LL+RI   
Sbjct: 253 ----------------------EKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMP 290

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           S T  WN VI + +Q+G   E    +K M ++Q   P   T  +++SA  ++    EG+ 
Sbjct: 291 S-TVAWNAVISSYSQSGLESEVFGLYKDM-KRQGLMPTRSTFASMLSAAASMTAFDEGQQ 348

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  A+K  +  +  V ++LI +Y +   I  A  VF+     N+  WN M+  F QN  
Sbjct: 349 IHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDL 408

Query: 553 EVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
           +   +++F   R  + E ++ + VS+L AC  L  L  G+Q+H          + F+++A
Sbjct: 409 QEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANA 468

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           +LDMYS                 K + +W+++I    ++ +  EA+ +   M   GI P 
Sbjct: 469 MLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPD 528

Query: 655 KSSVISLLSACSHSGLVDEGLQYY---------------NNMLEEYDVRPETEH------ 693
           + S  + ++ACS+    + G Q +               +++++ Y    + E       
Sbjct: 529 EVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLA 588

Query: 694 HV---------CIVDMLGRSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKM 741
           HV          ++  L ++ +  EA E  + +     +P    + ++LS C+    + +
Sbjct: 589 HVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVI 648

Query: 742 GKQVAELLFK--LEPENVGYYISLSNMYVALGRWKDA 776
           GKQV     K  L  ++    ISL  +Y+     +DA
Sbjct: 649 GKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDA 685


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 216/750 (28%), Positives = 366/750 (48%), Gaps = 50/750 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D++T   ++    +++ L QGR +H L ++ G+     L    + MY KCG    +   F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+     V+W +++     + +P++    FREM   G   ++V+  + + A     E+ 
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 192 YGKV-IHALG-IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             +  + A G ++L       V V  ++++ Y +CGD+++A   F G+  +D   WNA+I
Sbjct: 159 TIRARVEACGSLELD------VIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMI 212

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                + + +EA +L  +M+L   V P+  T V  ++ C  S    E   +H +A R L 
Sbjct: 213 SLLVAHEQGDEALELFRQMRL-GGVTPNKGTCVAALNACCHSRDFSEALRIHAFA-RELA 270

Query: 310 G-YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           G  D ++  +L++ Y K   +  AE +F  I    D+VSWN+M++              F
Sbjct: 271 GDADTVVQTALVNMYGKFGKVDDAEEIFERIQE-RDVVSWNAMLTANACNGFHDKAFKCF 329

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMY 413
           +EML +    S  T +AIL +C     L+ G  +    ++ G    ++ V    A+M+MY
Sbjct: 330 REMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY 389

Query: 414 INCGDLVAAFS---LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             C    +AFS   LL++         WN V+    +N  F+EA   F+ M      + D
Sbjct: 390 SRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLG-GVTID 448

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +V+L+ V +ACG+     +GK +H L  +S +   T VQNAL+TMY R   ++ A  +F+
Sbjct: 449 TVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFD 508

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
           +    N+ +W  M+   SQ      AL +FR +  E   PNE++  ++L+AC  L  +  
Sbjct: 509 AMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPA 568

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
            K +   +   GF  N  +++ LL     C               K+  +W++ I+A   
Sbjct: 569 AKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQ 628

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG G   +ELF  M   GI     ++I +LS+CSH+GLV +G  Y+ NM  +Y    E E
Sbjct: 629 HGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAE 688

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFK 751
           H+ C++D+L R+G L+ A EF+K LP   +    W  +L  C  HGD + G +  + +  
Sbjct: 689 HYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILG 748

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L P + G Y+ + N+Y   G+W +A  + K
Sbjct: 749 LNPGSTGPYLVMHNLYAGAGKWPEAAAVRK 778



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 167/637 (26%), Positives = 299/637 (46%), Gaps = 41/637 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y      E + A+F    +K VV W ++I     +       H F EM  +G+  +
Sbjct: 81  LLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPN 140

Query: 73  STTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             T + ++ A     +++ ++  RV  C S++  +I  +++    +N Y KCGDL+S+  
Sbjct: 141 DVTYVAVLGACGHPWEVDTIR-ARVEACGSLELDVIVATAV----MNAYGKCGDLDSAWG 195

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F G+   D   WN ++S  + +   ++ L  FR+M   G   +  +  +A+ A     +
Sbjct: 196 VFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRD 255

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            S    IHA   +L   D+  V V  +L++MY + G ++ AE  F  +  +DVVSWNA++
Sbjct: 256 FSEALRIHAFARELA-GDADTV-VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAML 313

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
              A NG  ++AF    EM L+  + P   T V +++ C  +  L+ G  V   A+    
Sbjct: 314 TANACNGFHDKAFKCFREMLLVGEL-PSRITYVAILNACFLAAHLKHGDFVKTLAVEGGC 372

Query: 310 G---YDLLMMNSLMDFYSKSNSLSKA---ELLFNAIAPMNDLVSWNSMIS---------- 353
           G    D++M  ++M+ YS+  S   A    LL         ++ WN+++S          
Sbjct: 373 GIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEE 432

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F+ ML         +L+ +  +C S  SLE GK IH    +   +  T   NAL+ 
Sbjct: 433 AFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVT 492

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G L  A  +   ++  +  S W  ++   +Q G  +EA++ F+S+   +  +P+ 
Sbjct: 493 MYARLGSLEDAREIFDAMTTRNVIS-WTAMVGVHSQLGLNREALRIFRSIL-LEGVAPNE 550

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT   V++ACGNL      K +     ++    +  V N L+   G+C  ++  +  F+ 
Sbjct: 551 VTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQV 610

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               N  +WN  I+A +Q+   VR +ELF+ ++ E      ++++ +LS+C+  G++  G
Sbjct: 611 MAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQG 670

Query: 589 KQ--IHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
               ++ HV + GF   +   S ++D+     S A W
Sbjct: 671 YSYFLNMHVDY-GFPAEAEHYSCVIDLL----SRAGW 702



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 228/501 (45%), Gaps = 21/501 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T+++ AY      +S+  +F     +D   WNAMI+  V +      L  F +M   G
Sbjct: 176 VATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGG 235

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  +  T +  ++A        +   +H  + +    AD+ +    VNMY K G ++ +E
Sbjct: 236 VTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAE 295

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D VSWN +++    N + +K    FREM   GE    ++  + + A     
Sbjct: 296 EIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAA 355

Query: 189 ELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAA-ERAFWGMTCKD---VV 243
            L +G  +  L ++ G   +S  V +  ++++MYS+C   ++A   +      +D   ++
Sbjct: 356 HLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIM 415

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WN ++  +  N +FEEAF +   M L+  V  D  +++T+ + C  S  L +G+ +H  
Sbjct: 416 MWNTVLSLYVENEQFEEAFTIFRLM-LLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSL 474

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE 358
                L     + N+L+  Y++  SL  A  +F+A+   N ++SW +M+      GL +E
Sbjct: 475 LTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRN-VISWTAMVGVHSQLGLNRE 533

Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            L +              T  A+L +C +  S+   K +     + GF  N    N L+ 
Sbjct: 534 ALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLC 593

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
               CG L    +  Q ++  +  S WN  I A  Q+G+    ++ F++M Q +     S
Sbjct: 594 TLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHGNGVRGVELFQTM-QLEGIDTGS 651

Query: 472 VTLVNVISACGNLELAFEGKS 492
           VTL+ V+S+C +  L  +G S
Sbjct: 652 VTLIGVLSSCSHAGLVAQGYS 672



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 228/510 (44%), Gaps = 48/510 (9%)

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           E++       D +T   LI  CA    L +GR +HG  +R  +     +   L+  Y K 
Sbjct: 29  ELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKC 88

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAI 374
            S  +A  +F  I     +V+W S+I     SG  KE  +L  +           T +A+
Sbjct: 89  GSPEEARAVFQGIQD-KSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAV 147

Query: 375 LPSCNSPESLEF--GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           L +C  P  ++    +   C  L+L    + I   A+M+ Y  CGDL +A+ +   I   
Sbjct: 148 LGACGHPWEVDTIRARVEACGSLEL----DVIVATAVMNAYGKCGDLDSAWGVFDGILVR 203

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D + WN +I     +    EA++ F+ M +    +P+  T V  ++AC +     E   
Sbjct: 204 -DAAVWNAMISLLVAHEQGDEALELFRQM-RLGGVTPNKGTCVAALNACCHSRDFSEALR 261

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  A +     DT VQ AL+ MYG+   +  A  +FE     ++ +WN M++A + N  
Sbjct: 262 IHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGF 321

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS---FI 606
             +A + FR +      P+ I+ V+IL+AC     L+HG  +       G    S    +
Sbjct: 322 HDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVM 381

Query: 607 SSALLDMYSNCKSNAA-------------------WSSMISAYGYHGKGWEAIELFHEMC 647
            +A+++MYS CKS  +                   W++++S Y  + +  EA  +F  M 
Sbjct: 382 GTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLML 441

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
             G+     S++++ +AC  S  +++G ++ +++L E ++  +T     +V M  R G L
Sbjct: 442 LGGVTIDTVSLMTVFNACGSSASLEKG-KWIHSLLTESELTRKTPVQNALVTMYARLGSL 500

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           ++A E    +  +     W AM+   S  G
Sbjct: 501 EDAREIFDAMTTRNVIS-WTAMVGVHSQLG 529



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 159/342 (46%), Gaps = 34/342 (9%)

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
           H  + +K F       + S D+ T   +I  C  L    +G+ +HGL L++ + +   + 
Sbjct: 25  HRTDELKYF------DDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLG 78

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--- 566
             L+ MY +C   + A  VF+   + ++  W  +I   +++     A  LFR ++ +   
Sbjct: 79  ARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVM 138

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE-NSFISSALLDMYSNC-------- 617
           PN+++ V++L AC   G       I   V   G  E +  +++A+++ Y  C        
Sbjct: 139 PNDVTYVAVLGAC---GHPWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWG 195

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  +  A W++MIS    H +G EA+ELF +M   G+ P K + ++ L+AC HS  
Sbjct: 196 VFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRD 255

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAM 729
             E L+ +     E     +T     +V+M G+ GK+ +A E  +   IQ +  V W AM
Sbjct: 256 FSEALRIH-AFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFER--IQERDVVSWNAM 312

Query: 730 LSACSHHG-DTKMGKQVAELLFKLE-PENVGYYISLSNMYVA 769
           L+A + +G   K  K   E+L   E P  + Y   L+  ++A
Sbjct: 313 LTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLA 354



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 32/228 (14%)

Query: 546 AFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           +FS +  + R  EL    +   +  +  +++  C +L  L  G++IHG +   G +   F
Sbjct: 17  SFSTSAPQHRTDELKYFDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDF 76

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + + LL MY  C               KS  AW+S+I      G   EA  LF EM   G
Sbjct: 77  LGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQG 136

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-----EYDVRPETEHHVCIVDMLGRSG 705
           + P   + +++L AC H   VD         +E     E DV   T     +++  G+ G
Sbjct: 137 VMPNDVTYVAVLGACGHPWEVDT----IRARVEACGSLELDVIVAT----AVMNAYGKCG 188

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            L  A+     + ++    VW AM+S    H   + G +  EL  ++ 
Sbjct: 189 DLDSAWGVFDGILVR-DAAVWNAMISLLVAH---EQGDEALELFRQMR 232



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 109/257 (42%), Gaps = 5/257 (1%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P   +L+T Y+ +   E +  +F     ++V++W AM+    +       L  F  ++ E
Sbjct: 485 PVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLE 544

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVH-CLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           G+  +  T   +++A   +  +   ++V  CLS + G   +  + N  +    KCG L  
Sbjct: 545 GVAPNEVTFTAVLNACGNLASIPAAKLVQACLS-ETGFFGNVEVANGLLCTLGKCGSLEE 603

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               F  M   + VSWNT ++    +    + +  F+ M   G    +V+L   +++ + 
Sbjct: 604 VANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSH 663

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVS 244
            G ++ G   + L + + Y         + +I + S+ G +E AE     +   D  V  
Sbjct: 664 AGLVAQG-YSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFP 722

Query: 245 WNAIIDGFALNGKFEEA 261
           W  ++ G  L+G  E  
Sbjct: 723 WITLLCGCKLHGDLERG 739



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 4/156 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  +  LL         E     F     K+ V+WN  I A  ++   V G+  F
Sbjct: 580 GFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELF 639

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAK 120
             M  EGI   S TL+ ++S+ +    + QG      + +  G  A++   +  +++ ++
Sbjct: 640 QTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSR 699

Query: 121 CGDLNSSECTFSGMHCAD--TVSWNTIMSGC-LHNN 153
            G L  +E     +   D     W T++ GC LH +
Sbjct: 700 AGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGD 735


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/620 (31%), Positives = 326/620 (52%), Gaps = 41/620 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +HAL + LG   S   ++ + L + Y+QC     A   F  ++   + SWNA++  + 
Sbjct: 31  KRLHALILTLGIFSSS--NLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYV 88

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G+  +A +L  EM       PD  T   +I  C D  L+  G  +HG   +     D 
Sbjct: 89  QIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDT 148

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISGLFK------------EM 359
            + N+L+  Y  +     A+L+F+   PM +  ++SWN+MI+G F+             M
Sbjct: 149 FVQNTLLAMYMNAGEKEAAQLVFD---PMQERTVISWNTMINGYFRNNCAEDAVNVYGRM 205

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           + +  +   +T++++LP+C   +++E G+ +H    + GF  N +  NAL+ MY+ CG +
Sbjct: 206 MDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQM 265

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A+ LL +   + D   W  +I     NG  + A+     M Q +   P+SV++ +++S
Sbjct: 266 KEAW-LLAKGMDDKDVVTWTTLINGYILNGDARSAL-MLCGMMQCEGVKPNSVSIASLLS 323

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           ACG+L     GK LH  A++  +  +  V+ ALI MY +C     +  VF          
Sbjct: 324 ACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAP 383

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN ++S F QN+    A+ELF+ +   + +P+  +  S+L A   L  L+    IH ++ 
Sbjct: 384 WNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLI 443

Query: 597 HLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEA 639
             GF     ++S L+D+YS C                 K    WS++I+AYG HG G  A
Sbjct: 444 RSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMA 503

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++LF++M  SG++P   +  S+L ACSH+GLV+EG   +N ML+++ +    +H+ C++D
Sbjct: 504 VKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMID 563

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR+G+L +AY  I+ +PI P   VWGA+L AC  H + ++G+  A   FKLEPEN G 
Sbjct: 564 LLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGN 623

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ L+ +Y A+GRW DA  +
Sbjct: 624 YVLLAKLYAAVGRWGDAERV 643



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 266/584 (45%), Gaps = 49/584 (8%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + L T Y+   +   +  LF +     + +WNAM+   V+       L+ F EM+  G  
Sbjct: 50  SKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRT 109

Query: 71  F-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  T  +++ A   ++ +  G  +H  + K G  +D+ + N  + MY   G+  +++ 
Sbjct: 110 LPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQL 169

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M     +SWNT+++G   NN  E  +  +  M   G + D  ++ S + A   L  
Sbjct: 170 VFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKN 229

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G+ +H L  + G+  +  + V N+L+ MY +CG ++ A     GM  KDVV+W  +I
Sbjct: 230 VELGREVHTLVQEKGFWGN--IVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLI 287

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           +G+ LNG    A  L   MQ    V+P+  ++ +L+S C   + L  G+ +H +AIR+ +
Sbjct: 288 NGYILNGDARSALMLCGMMQC-EGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKI 346

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++++  +L++ Y+K N  + +  +F   +       WN+++SG            LFK
Sbjct: 347 ESEVIVETALINMYAKCNCGNLSYKVFMGTSK-KRTAPWNALLSGFIQNRLAREAIELFK 405

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +ML    Q   +T  ++LP+      L+   +IHC+ ++ GF       + L+ +Y  CG
Sbjct: 406 QMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCG 465

Query: 418 DLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            L  A  +   IS  + D   W+ +I A  ++GH + A+K F  M  Q    P+ VT  +
Sbjct: 466 SLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMV-QSGVKPNHVTFTS 524

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC +  L  EG SL    LK         Q+ +I+                     +
Sbjct: 525 VLHACSHAGLVNEGFSLFNFMLK---------QHQIIS---------------------H 554

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACT 580
           +  + CMI    +      A  L R +   PN     ++L AC 
Sbjct: 555 VDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACV 598



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 164/659 (24%), Positives = 300/659 (45%), Gaps = 55/659 (8%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           + + +H L +  G+ + S+LC+     YA+C   + +   F  +      SWN +M   +
Sbjct: 29  ETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYV 88

Query: 151 HNNYPEKCLLYFREMGWSGEQ-ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
               P   L  F EM  SG    D  +    + A   L  +  G  IH    K GY+   
Sbjct: 89  QIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDT 148

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +V   N+L++MY   G+ EAA+  F  M  + V+SWN +I+G+  N   E+A ++   M 
Sbjct: 149 FVQ--NTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMM 206

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
            +  VEPD ATVV+++  C     +  GR VH     +    ++++ N+L+D Y K   +
Sbjct: 207 DV-GVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQM 265

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPS 377
            +A LL   +    D+V+W ++I+G       +  L LC             ++ ++L +
Sbjct: 266 KEAWLLAKGMDD-KDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSA 324

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI--NCGDLVAAFSLLQRISHNSDT 435
           C S   L  GK +H W ++    +  I   AL++MY   NCG+L  ++ +    S    T
Sbjct: 325 CGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNL--SYKVFMGTS-KKRT 381

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           + WN ++    QN   +EAI+ FK M   ++  PD  T  +++ A   L    +  ++H 
Sbjct: 382 APWNALLSGFIQNRLAREAIELFKQML-VKDVQPDHATFNSLLPAYAILADLQQAMNIHC 440

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAE 553
             ++S       V + L+ +Y +C  +  A  +F   S  + ++  W+ +I+A+ ++   
Sbjct: 441 YLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHG 500

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A++LF  +     +PN ++  S+L AC+  G++  G  +    F+   +++  IS   
Sbjct: 501 KMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSL----FNFMLKQHQIISH-- 554

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
           +D Y         + MI   G  G+  +A  L   M    I P  +   +LL AC    +
Sbjct: 555 VDHY---------TCMIDLLGRAGRLNDAYNLIRTM---PITPNHAVWGALLGAC----V 598

Query: 671 VDEGLQYYNNMLE-EYDVRPE-TEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQPKPG 724
           + E ++         + + PE T ++V +  +   +GR G  +   + +  + ++  P 
Sbjct: 599 IHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPA 657



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 217/459 (47%), Gaps = 17/459 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ +      +LL  Y N    E++  +F     + V++WN MI     N C    ++ +
Sbjct: 143 GYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVY 202

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M++ G+  D  T++ ++ A   +  ++ GR VH L  + G   +  + N  V+MY KC
Sbjct: 203 GRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKC 262

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +     GM   D V+W T+++G + N      L+    M   G + ++VS++S +
Sbjct: 263 GQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLL 322

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   L  L++GK +HA  I+   E    V V  +LI+MY++C     + + F G + K 
Sbjct: 323 SACGSLVYLNHGKCLHAWAIRQKIESE--VIVETALINMYAKCNCGNLSYKVFMGTSKKR 380

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
              WNA++ GF  N    EA +L  +M L++ V+PD AT  +L+   A    L++  ++H
Sbjct: 381 TAPWNALLSGFIQNRLAREAIELFKQM-LVKDVQPDHATFNSLLPAYAILADLQQAMNIH 439

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV-------------SW 348
            Y IR    Y L + + L+D YSK  SL  A  +FN I+  +  +               
Sbjct: 440 CYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGH 499

Query: 349 NSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVN 407
             M   LF +M+    + +  T  ++L +C+    +  G S+  + LK     ++     
Sbjct: 500 GKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYT 559

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
            ++ +    G L  A++L++ +    + + W  ++ AC 
Sbjct: 560 CMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACV 598



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 185/404 (45%), Gaps = 29/404 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  ++    +L+  Y      + +  L     +KDVVTW  +I   + N      L  
Sbjct: 243 KGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALML 302

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            G M  EG++ +S ++  ++SA   +  L  G+ +H  +I+  + ++  +    +NMYAK
Sbjct: 303 CGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAK 362

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C   N S   F G     T  WN ++SG + N    + +  F++M     Q D+ + +S 
Sbjct: 363 CNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSL 422

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF--WGMT 238
           + A A L +L     IH   I+ G+     + V + L+ +YS+CG +  A + F    + 
Sbjct: 423 LPAYAILADLQQAMNIHCYLIRSGFLYR--LEVASILVDIYSKCGSLGYAHQIFNIISLK 480

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++ W+AII  +  +G  + A  L ++M +   V+P+  T  +++  C+ + L+ EG 
Sbjct: 481 DKDIIIWSAIIAAYGKHGHGKMAVKLFNQM-VQSGVKPNHVTFTSVLHACSHAGLVNEGF 539

Query: 299 SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
           S+  + +++  +   +     ++D   ++  L+ A   +N I  M   ++ N  + G   
Sbjct: 540 SLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDA---YNLIRTMP--ITPNHAVWG--- 591

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                          A+L +C   E++E G+    W  KL   N
Sbjct: 592 ---------------ALLGACVIHENVELGEVAARWTFKLEPEN 620


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 239/818 (29%), Positives = 382/818 (46%), Gaps = 87/818 (10%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV-----ENRCVVMGLHFFGEM 64
            S +LLT YS      S+  +F  T  +D+VTWNA++ A        +     GLH F  +
Sbjct: 659  SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 718

Query: 65   VEEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                    STT + +   L       CL     VH  +IK G+  D  +    VN+Y+KC
Sbjct: 719  RAS---LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKC 775

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G +  +   F  M   D V WN ++ G +     ++    F E   SG + D  S+   +
Sbjct: 776  GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLIL 835

Query: 182  AASACLGELSY--GK----VIHALGIKLGY-EDSPYVSVTNSLISMYSQCGDIEAAERAF 234
                 + E+++  GK     + A   KL   +D+P V   N  +S     GD        
Sbjct: 836  NG---VSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGD-------- 884

Query: 235  WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                     +W AI     +NG                +++ D  T++ +++  A +  L
Sbjct: 885  ---------NWGAIECFVNMNG---------------LNIDYDAVTLLVVLAAVAGTDDL 920

Query: 295  REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS- 353
              G+ VHG A++  L  D+ + NSL++ YSK      A  +FN +  + DL+SWNSMIS 
Sbjct: 921  ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL-DLISWNSMISS 979

Query: 354  -----------GLFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSN 401
                        LF ++L+   +    TL ++L +C+S  + L   + IH   LK G   
Sbjct: 980  CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIA 1039

Query: 402  NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            ++     L+ +Y   G +  A  L Q    + D +CWN ++         ++A++ F S+
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQN-KDDLDLACWNAMMFGYIIGNDGKKALELF-SL 1097

Query: 462  TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
              +     D +TL     ACG L L  +GK +H  A+K+    D  V + ++ MY +C D
Sbjct: 1098 IHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 1157

Query: 522  IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
            + +A  VF      +   W  MIS    N  E +AL ++   R     P+E +  +++ A
Sbjct: 1158 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 1217

Query: 579  CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
             + +  L  G+Q+H +V  L    + F+ ++L+DMY+ C               ++ A W
Sbjct: 1218 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 1277

Query: 624  SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            ++M+     HG   EA+ LF  M + GI P + S I +LSACSH+GL  E  +Y ++M  
Sbjct: 1278 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 1337

Query: 684  EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
            +Y + PE EH+ C+VD LGR+G +QEA + I+ +P +    +  A+L AC   GD + GK
Sbjct: 1338 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGK 1397

Query: 744  QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +VA  LF LEP +   Y+ LSN+Y A  RW D  +  K
Sbjct: 1398 RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 1435



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 188/716 (26%), Positives = 329/716 (45%), Gaps = 64/716 (8%)

Query: 78   IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
            ++ +A++  N L  G+  H   + +G   D  L N  + MY+KCG L+S+   F      
Sbjct: 627  LLRTAISTHNLL-LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER 685

Query: 138  DTVSWNTIMSGCL-----HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            D V+WN I+         ++   ++ L  FR +  S      ++L+  +      G L  
Sbjct: 686  DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745

Query: 193  GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
             + +H   IK+G E   +VS   +L+++YS+CG +  A   F  M  +DVV WN ++ G+
Sbjct: 746  AEGVHGYAIKIGLEWDVFVS--GALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGY 803

Query: 253  ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR----SVHGYAIRRL 308
               G  +EAF L  E      + PD  +V  +++  ++ +   EG+     V  YA +  
Sbjct: 804  VQLGLEKEAFQLFSEFH-RSGLRPDEFSVQLILNGVSE-VNWDEGKWLADQVQAYAAK-- 859

Query: 309  LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
                L + +   D +  +  LS  E L+          +W ++    F  M  L   +  
Sbjct: 860  ----LSLSDDNPDVFCWNKKLS--ECLWAGD-------NWGAI--ECFVNMNGLNIDYDA 904

Query: 369  STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
             TLL +L +    + LE GK +H   +K G  ++    N+L++MY   G    A  +   
Sbjct: 905  VTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFND 964

Query: 429  ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
            + H  D   WN +I +C Q+   +E++  F  +   +   PD  TL +V+ AC +L    
Sbjct: 965  MKH-LDLISWNSMISSCAQSSLEEESVNLFIDLL-HEGLKPDHFTLASVLRACSSLIDGL 1022

Query: 489  E-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
               + +H  ALK+    D+ V   LI +Y +   ++ A  +F++  + +L  WN M+  +
Sbjct: 1023 NISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGY 1082

Query: 548  SQNKAEVRALELFR--HLEFEP-NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                   +ALELF   H   E  ++I++ +   AC  L +L  GKQIH H    GF  + 
Sbjct: 1083 IIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 1142

Query: 605  FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
             ++S +LDMY  C                 + AW+SMIS    +G   +A+ ++H M  S
Sbjct: 1143 HVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 1202

Query: 650  GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
             + P + +  +L+ A S    +++G Q + N++ + D   +      +VDM  + G +++
Sbjct: 1203 RVMPDEYTFATLIKASSCVTALEQGRQLHANVI-KLDCVSDPFVGTSLVDMYAKCGNIED 1261

Query: 710  AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK------LEPENVGY 759
            AY   K + ++    +W AML   + HG+     + A  LFK      +EP+ V +
Sbjct: 1262 AYRLFKKMNVR-NIALWNAMLVGLAQHGNA----EEAVNLFKSMKSHGIEPDRVSF 1312



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 188/357 (52%), Gaps = 9/357 (2%)

Query: 2    GFLAHLPTSTSLLTAYSNV--SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
            G  + +  + SL+  YS +  +YF  +  +F +  + D+++WN+MI++C ++      ++
Sbjct: 934  GLDSDVSVANSLVNMYSKMGCAYF--AREVFNDMKHLDLISWNSMISSCAQSSLEEESVN 991

Query: 60   FFGEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F +++ EG++ D  TL  ++ A + + + L   R +H  ++K G IADS +    +++Y
Sbjct: 992  LFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVY 1051

Query: 119  AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            +K G +  +E  F      D   WN +M G +  N  +K L  F  +  SGE++D ++L+
Sbjct: 1052 SKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLA 1111

Query: 179  SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +A  A  CL  L  GK IHA  IK G++    + V + ++ MY +CGD+  A   F  ++
Sbjct: 1112 TAAKACGCLVLLDQGKQIHAHAIKAGFDSD--LHVNSGILDMYIKCGDMVNAGIVFNYIS 1169

Query: 239  CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
              D V+W ++I G   NG  ++A  + H M+  R V PD  T  TLI   +    L +GR
Sbjct: 1170 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR-VMPDEYTFATLIKASSCVTALEQGR 1228

Query: 299  SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
             +H   I+     D  +  SL+D Y+K  ++  A  LF  +   N +  WN+M+ GL
Sbjct: 1229 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN-IALWNAMLVGL 1284



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 152/296 (51%), Gaps = 3/296 (1%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            G +A    +T+L+  YS     E +  LF    + D+  WNAM+   +        L  F
Sbjct: 1036 GNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
              + + G + D  TL     A   +  L QG+ +H  +IKAG  +D  + +  ++MY KC
Sbjct: 1096 SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 1155

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            GD+ ++   F+ +   D V+W +++SGC+ N   ++ L  +  M  S    D  + ++ +
Sbjct: 1156 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 1215

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             AS+C+  L  G+ +HA  IKL     P+V    SL+ MY++CG+IE A R F  M  ++
Sbjct: 1216 KASSCVTALEQGRQLHANVIKLDCVSDPFVGT--SLVDMYAKCGNIEDAYRLFKKMNVRN 1273

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            +  WNA++ G A +G  EEA +L   M+    +EPD  + + ++S C+ + L  E 
Sbjct: 1274 IALWNAMLVGLAQHGNAEEAVNLFKSMK-SHGIEPDRVSFIGILSACSHAGLTSEA 1328



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 134/318 (42%), Gaps = 40/318 (12%)

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF-- 547
           GK  H   + S    D  + N L+TMY +C  + SA  VF++    +L TWN ++ A+  
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699

Query: 548 ---SQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
              S +      L LFR L         +++  +L  C   G L   + +HG+   +G +
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            + F+S AL+++YS C               +    W+ M+  Y   G   EA +LF E 
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEG------LQYYNNMLEEYDVRPETEHHVCIVDM 700
             SG+RP + SV  +L+  S     DEG      +Q Y   L   D  P+     C    
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQVQAYAAKLSLSDDNPDV---FCWNKK 875

Query: 701 L------GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
           L      G +    E +  +  L I         +L+A +   D ++GKQV  +  K   
Sbjct: 876 LSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGL 935

Query: 755 E-NVGYYISLSNMYVALG 771
           + +V    SL NMY  +G
Sbjct: 936 DSDVSVANSLVNMYSKMG 953



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 169/404 (41%), Gaps = 48/404 (11%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +  S  +L  GK  H   +  G + +    N L+ MY  CG L +A  +    +   
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFD-TTPER 685

Query: 434 DTSCWNIVIVAC-----TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           D   WN ++ A      + +G+ QE +  F+ + +    S   +TL  V+  C N    +
Sbjct: 686 DLVTWNAILGAYAASVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLW 744

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
             + +HG A+K  +  D  V  AL+ +Y +C  ++ A  +F+     ++  WN M+  + 
Sbjct: 745 AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 804

Query: 549 QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q   E  A +LF         P+E S+  IL+  +++     GK +   V          
Sbjct: 805 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAY------- 856

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
             +A L +  +      W+  +S   + G  W AIE F  M    I     +++ +L+A 
Sbjct: 857 --AAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAV 914

Query: 666 SHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSG---KLQEAYEFIKNLPI 719
           + +  ++ G Q +   ++   + DV         +V+M  + G     +E +  +K+L +
Sbjct: 915 AGTDDLELGKQVHGIAVKSGLDSDVSVAN----SLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
                 W +M+S+C+                 LE E+V  +I L
Sbjct: 971 IS----WNSMISSCAQS--------------SLEEESVNLFIDL 996


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 209/695 (30%), Positives = 349/695 (50%), Gaps = 76/695 (10%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            V +YAKCG    +   F      +  SW  I+       + E+ L  + +M   G   D
Sbjct: 94  LVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPD 153

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           N  L + + A   L  + +GK +HA  +K +G ++  YV+   SL+ MY +CG +E A +
Sbjct: 154 NFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVA--TSLVDMYGKCGAVEDAGK 211

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M+ ++ V+WN+++  +A NG  +EA  +  EM+L + VE  +  +    + CA+S 
Sbjct: 212 VFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRL-QGVEVTLVALSGFFTACANSE 270

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            + EGR  HG A+   L  D ++ +S+M+FY K   + +AE++F  +A + D+V+WN ++
Sbjct: 271 AVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMA-VKDVVTWNLVV 329

Query: 353 SG-----LFKEMLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           +G     + ++ L +C        +F   TL A+L        L  G   H + +K  F 
Sbjct: 330 AGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFE 389

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            + +  + ++ MY  CG +  A  +   +    D   WN ++ AC + G   EA+K F  
Sbjct: 390 GDVVVSSGIIDMYAKCGRMDCARRVFSCV-RKKDIVLWNTMLAACAEQGLSGEALKLFFQ 448

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M Q ++  P      NV+S                              N+LI  + +  
Sbjct: 449 M-QLESVPP------NVVS-----------------------------WNSLIFGFFKNG 472

Query: 521 DIKSASTVF-ESCYN---CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIV 573
            +  A  +F E C +    NL TW  M+S   QN     A+ +FR ++     PN +SI 
Sbjct: 473 QVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSIT 532

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           S LS CT + +L+HG+ IHG+V      ++  I ++++DMY+ C               K
Sbjct: 533 SALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTK 592

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
               +++MISAY  HG+  EA+ LF +M   GI P   ++ S+LSACSH GL+ EG++ +
Sbjct: 593 ELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVF 652

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
             M+ E  ++P  EH+ C+V +L   G+L EA   I  +P  P   + G++L+AC  + D
Sbjct: 653 KYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNND 712

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
            ++   +A+ L KL+P+N G Y++LSN+Y A+G+W
Sbjct: 713 IELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKW 747



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 133/497 (26%), Positives = 228/497 (45%), Gaps = 55/497 (11%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +TSL+  Y      E +  +F E   ++ VTWN+M+    +N      +  F EM  +G
Sbjct: 192 VATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQG 251

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +      L    +A      + +GR  H L++  G+  D+ L +  +N Y K G +  +E
Sbjct: 252 VEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAE 311

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D V+WN +++G       EK L     M   G + D V+LS+ +A +A   
Sbjct: 312 VVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTR 371

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G   HA  +K  +E    V V++ +I MY++CG ++ A R F  +  KD+V WN +
Sbjct: 372 DLVLGMKAHAYCVKNDFEGD--VVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTM 429

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +   A  G   EA  L  +MQL  SV P++ +                            
Sbjct: 430 LAACAEQGLSGEALKLFFQMQL-ESVPPNVVS---------------------------- 460

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAI---APMNDLVSWNSMISGL---------- 355
                   NSL+  + K+  +++A  +F  +     M +L++W +M+SGL          
Sbjct: 461 -------WNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAM 513

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F+EM  +  + +  ++ + L  C S   L+ G++IH + ++   S +   + ++M MY
Sbjct: 514 MVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMY 573

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A  + +  S   +   +N +I A   +G  +EA+  FK M +++   PD +T
Sbjct: 574 AKCGSLDGAKCVFKMCS-TKELYVYNAMISAYASHGQAREALVLFKQM-EKEGIVPDHIT 631

Query: 474 LVNVISACGNLELAFEG 490
           L +V+SAC +  L  EG
Sbjct: 632 LTSVLSACSHGGLMKEG 648



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 182/415 (43%), Gaps = 57/415 (13%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S+ ++  Y+     + +  +F     KD+V WN M+ AC E       L  F 
Sbjct: 388 FEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFF 447

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M  E +  +          +   N L  G        K G +A++       NM+A   
Sbjct: 448 QMQLESVPPN----------VVSWNSLIFG------FFKNGQVAEAR------NMFA--- 482

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
                E   SG+   + ++W T+MSG + N +    ++ FREM   G + +++S++SA++
Sbjct: 483 -----EMCSSGV-MPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALS 536

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
               +  L +G+ IH  G  +  + S  + +  S++ MY++CG ++ A+  F   + K++
Sbjct: 537 GCTSMALLKHGRAIH--GYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKEL 594

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
             +NA+I  +A +G+  EA  L  +M+    + PD  T+ +++S C+   L++EG  V  
Sbjct: 595 YVYNAMISAYASHGQAREALVLFKQME-KEGIVPDHITLTSVLSACSHGGLMKEGIKVFK 653

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
           Y +  L                    +  +E  +  +     L++ +  +    + +L +
Sbjct: 654 YMVSEL-------------------QMKPSEEHYGCLV---KLLANDGQLDEALRTILTM 691

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            S      L ++L +C     +E    I  W LKL   +N+    AL ++Y   G
Sbjct: 692 PSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLD-PDNSGNYVALSNVYAAVG 745


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 210/732 (28%), Positives = 371/732 (50%), Gaps = 43/732 (5%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T+      G++VH   + +G   +  + N  + MYAKCG L  +   F  +   +  SW 
Sbjct: 37  TEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWT 96

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            +++      +  + L  FR+M   G + D    S+ + A +  G L+ GK IH   +  
Sbjct: 97  ALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLA 156

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G E      V N+++++Y +CG +  A+  F  +  +++VSWNA+I   A NG  ++A  
Sbjct: 157 GMETQ---VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQ 213

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           + H M L  SV P+ AT V+++  C++ L L  G+S H   IR      L + NSL++ Y
Sbjct: 214 VFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMY 273

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS----TLLAI 374
            K  S+ +A L+F  ++  N +VSW  MI      G  +    L  +        T +A+
Sbjct: 274 GKCGSVDRARLVFEKMSSRN-VVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAV 332

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           + SC  PE L   + IH   +  GF ++ +    L+ MY  CG + +A+S+ + +   S+
Sbjct: 333 MDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSN 392

Query: 435 TSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            +  WN +I    Q+G  ++A++ F  M + +   P+SVT +  + AC +L     G+ L
Sbjct: 393 NAVTWNAMISGLAQHGESKQALECFWKM-ELEGVRPNSVTYLASLEACSSLNDLTRGRQL 451

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   L   +  +  + NA+I MYG+C  +  A   F      ++ +WN MI+ ++Q+ + 
Sbjct: 452 HARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSG 510

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLG--FQENSFISS 608
            +ALE F+ ++ E    +  + +  + AC  +  L  GK IH  V       +++  +++
Sbjct: 511 RQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVAT 570

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL+ MY+ C               ++   WS++I+A   HG+  EA++LF EM   G +P
Sbjct: 571 ALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKP 630

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              +  +L++ACS  G+V +G+ Y+ +M+E+Y +    +H   +VD+LGR+G L+EA + 
Sbjct: 631 DALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQV 690

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS----LSNMYVA 769
           ++  P      V   +L AC  HGD + G ++A+   +L+ +N   + +    L+ +Y A
Sbjct: 691 MRKNPCALAHAV---LLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGA 747

Query: 770 LGRWKDAVEIGK 781
            GRW+DA  + K
Sbjct: 748 AGRWEDAARVRK 759



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 190/690 (27%), Positives = 329/690 (47%), Gaps = 50/690 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+     E +L +F    N +V +W A+ITA  +   +   L  F +M  +G + D
Sbjct: 67  LIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPD 126

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +     +++A +    L +G+ +H  ++ AGM     + N  VN+Y KCG ++ ++  F 
Sbjct: 127 AFVFSTVLTACSSAGALNEGKAIHDCAVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFE 185

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS 191
            +   + VSWN +++    N + +  +  F  M   G  + ++ +  S V A + L +L 
Sbjct: 186 RLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLP 245

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK  H   I+ G++   Y+ V NSL++MY +CG ++ A   F  M+ ++VVSW  +I  
Sbjct: 246 RGKSTHERIIRTGFDS--YLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWA 303

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A  G    AFDL   M      EP+  T + ++  C     L     +H + +      
Sbjct: 304 YAQQGFIRAAFDLYKRM----DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDS 359

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISGL------------FKE 358
           D ++   L+  Y K  S+  A  +F N     N+ V+WN+MISGL            F +
Sbjct: 360 DAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWK 419

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     + +  T LA L +C+S   L  G+ +H   L        +  NA+++MY  CG 
Sbjct: 420 MELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEANLS-NAVINMYGKCGS 478

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A     ++    D   WN +I    Q+G  ++A++ FK M   +  + D  T +  I
Sbjct: 479 LDEAMDEFAKMPER-DVVSWNTMIATYAQHGSGRQALEFFKQM-DLEGWTTDRATYLGAI 536

Query: 479 SACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            ACG++     GK++H +   +   L  D  V  AL+TMY RC  +  A +VF   ++ N
Sbjct: 537 DACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRN 596

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           L TW+ +I+A +Q+  E  AL+LFR ++ +   P+ ++  ++++AC++ GV++ G     
Sbjct: 597 LVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDG----- 651

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            VF+       F+S  +++ YS   S   +  M+   G  G   EA ++  +       P
Sbjct: 652 -VFY-------FVS--MVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRK------NP 695

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
              +   LL AC   G V+ G++   + LE
Sbjct: 696 CALAHAVLLGACHVHGDVERGIRIAQSALE 725



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 256/525 (48%), Gaps = 49/525 (9%)

Query: 266 HEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           H  QL +S E    A   +L+  C +      G+ VH + +    G +  + N L+  Y+
Sbjct: 13  HINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYA 72

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQ---FSFS 369
           K   L  A  +F  + P  ++ SW ++I+            GLF++M    ++   F FS
Sbjct: 73  KCGCLEDALEVFELL-PNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFS 131

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T   +L +C+S  +L  GK+IH   +  G     +G NA++++Y  CG +  A ++ +R+
Sbjct: 132 T---VLTACSSAGALNEGKAIHDCAVLAGMETQVVG-NAIVNLYGKCGRVHEAKAVFERL 187

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +  S WN +I A  QNGH ++A++ F  M    +  P+  T V+V+ AC NL     
Sbjct: 188 PERNLVS-WNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPR 246

Query: 490 GKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           GKS H   +++  G D+   V N+L+ MYG+C  +  A  VFE   + N+ +W  MI A+
Sbjct: 247 GKSTHERIIRT--GFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAY 304

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
           +Q      A +L++ ++ EPN ++ ++++ +C +   L   +QIH H+   GF  ++ + 
Sbjct: 305 AQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQ 364

Query: 608 SALLDMYSNC---------------KSNAA--WSSMISAYGYHGKGWEAIELFHEMCNSG 650
             L+ MY  C               +SN A  W++MIS    HG+  +A+E F +M   G
Sbjct: 365 VCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEG 424

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           +RP   + ++ L ACS    +  G Q +  +L E     E      +++M G+ G L EA
Sbjct: 425 VRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI--HEANLSNAVINMYGKCGSLDEA 482

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            +    +P +     W  M++  + HG    G+Q  E   +++ E
Sbjct: 483 MDEFAKMP-ERDVVSWNTMIATYAQHGS---GRQALEFFKQMDLE 523



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 234/502 (46%), Gaps = 39/502 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IR 70
           +++  Y        + A+F     +++V+WNA+I A  +N      +  F  M  +G +R
Sbjct: 166 AIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVR 225

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T + +V A + +  L +G+  H   I+ G  +   + N  VNMY KCG ++ +   
Sbjct: 226 PNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLV 285

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSW  ++       +       ++ M     + + V+  + + +     +L
Sbjct: 286 FEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDC---EPNAVTFMAVMDSCLRPEDL 342

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK--DVVSWNAI 248
              + IHA  +  G++    + V   L++MY +CG +++A   F  +  +  + V+WNA+
Sbjct: 343 PRAEQIHAHMVASGFDSDAVLQVC--LVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAM 400

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G A +G+ ++A +   +M+L   V P+  T +  +  C+    L  GR +H   +   
Sbjct: 401 ISGLAQHGESKQALECFWKMEL-EGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLEN 459

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           + ++  + N++++ Y K  SL +A   F A  P  D+VSWN+MI+              F
Sbjct: 460 I-HEANLSNAVINMYGKCGSLDEAMDEF-AKMPERDVVSWNTMIATYAQHGSGRQALEFF 517

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH--------CWQLKLGFSNNTIGVNA 408
           K+M         +T L  + +C S  SL  GK+IH        C +   G +       A
Sbjct: 518 KQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVA------TA 571

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  A S+  R SH+ +   W+ +I AC Q+G   EA+  F+ M Q Q   
Sbjct: 572 LVTMYARCGSLHDAKSVFWR-SHSRNLVTWSNLIAACAQHGRENEALDLFREM-QLQGTK 629

Query: 469 PDSVTLVNVISACGNLELAFEG 490
           PD++T   +++AC    +  +G
Sbjct: 630 PDALTFSTLVAACSRRGVVKDG 651



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 188/391 (48%), Gaps = 27/391 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++L    SL+  Y      + +  +F +  +++VV+W  MI A  +   +      +
Sbjct: 258 GFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLY 317

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E    ++ T + ++ +  +   L +   +H   + +G  +D+ L    V MY KC
Sbjct: 318 KRMDCEP---NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKC 374

Query: 122 GDLNSSECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           G ++S+   F  +     + V+WN ++SG   +   ++ L  F +M   G + ++V+  +
Sbjct: 375 GSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLA 434

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++ A + L +L+ G+ +HA   ++  E+    +++N++I+MY +CG ++ A   F  M  
Sbjct: 435 SLEACSSLNDLTRGRQLHA---RILLENIHEANLSNAVINMYGKCGSLDEAMDEFAKMPE 491

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DVVSWN +I  +A +G   +A +   +M L      D AT +  I  C     L  G++
Sbjct: 492 RDVVSWNTMIATYAQHGSGRQALEFFKQMDL-EGWTTDRATYLGAIDACGSVPSLALGKT 550

Query: 300 VHGYAIRRL--LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +H         L  D  +  +L+  Y++  SL  A+ +F      N LV+W+++I+    
Sbjct: 551 IHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRN-LVTWSNLIAACAQ 609

Query: 355 ---------LFKEMLYLCSQ---FSFSTLLA 373
                    LF+EM    ++    +FSTL+A
Sbjct: 610 HGRENEALDLFREMQLQGTKPDALTFSTLVA 640



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 152/341 (44%), Gaps = 50/341 (14%)

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           +++T  +  ++ + S       +++  C   + A  GK +H   L S  G++  +QN LI
Sbjct: 9   SLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLI 68

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEI 570
            MY +C  ++ A  VFE   N N+ +W  +I+A+++       L LFR ++ +   P+  
Sbjct: 69  FMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAF 128

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
              ++L+AC+  G L  GK IH      G  E   + +A++++Y  C             
Sbjct: 129 VFSTVLTACSSAGALNEGKAIHDCAVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFERL 187

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACS-------- 666
             ++  +W+++I+A   +G   +A+++FH M  +  +RP  ++ +S++ ACS        
Sbjct: 188 PERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247

Query: 667 ---HSGLVDEGLQYY----NNMLEEYDVRPETEHHVCIVDML---------------GRS 704
              H  ++  G   Y    N+++  Y      +    + + +                + 
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
           G ++ A++  K +  +P    + A++ +C    D    +Q+
Sbjct: 308 GFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLPRAEQI 348



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 3/232 (1%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S +++  Y      + ++  F +   +DVV+WN MI    ++      L FF +M  EG 
Sbjct: 466 SNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGW 525

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG--MIADSSLCNVFVNMYAKCGDLNSS 127
             D  T L  + A   +  L  G+ +H +   A   +  D  +    V MYA+CG L+ +
Sbjct: 526 TTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDA 585

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F   H  + V+W+ +++ C  +    + L  FREM   G + D ++ S+ VAA +  
Sbjct: 586 KSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRR 645

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           G +  G V + + +   Y           ++ +  + G +E AE+      C
Sbjct: 646 GVVKDG-VFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPC 696



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 47/84 (55%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T+L+T Y+       + ++F+ + ++++VTW+ +I AC ++      L  F EM  +G
Sbjct: 568 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQG 627

Query: 69  IRFDSTTLLIIVSALTQMNCLKQG 92
            + D+ T   +V+A ++   +K G
Sbjct: 628 TKPDALTFSTLVAACSRRGVVKDG 651


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 200/640 (31%), Positives = 324/640 (50%), Gaps = 87/640 (13%)

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           ++Y  C  I  +      + CK +  +N  I  F   G    A +L+++     S +PD+
Sbjct: 46  NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELINQ-----SPKPDL 99

Query: 279 A--TVVTLISLCADSLLLREGRSVHG------YAIRRLLGYDLLMM-------------- 316
              T  +++ LCAD   +++GR +H         +  +LG  L+ M              
Sbjct: 100 ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIF 159

Query: 317 -----------NSLMDFYSKSNSLSKAELLFNAIAPM-----------------NDLVSW 348
                      N LM+ Y+K  +  ++  LF  +  +                  D++SW
Sbjct: 160 DKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISW 219

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           NSMISG            LF++ML L      +T+++++  C++   L  G+++H + +K
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIK 279

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
             F       N L+ MY   G+L +A  + + +   S  S W  +I    + G    +++
Sbjct: 280 ASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS-WTSMIAGYAREGLSDMSVR 338

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M +++  SPD  T+  ++ AC    L   GK +H    ++ M  D  V NAL+ MY
Sbjct: 339 LFHEM-EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMY 397

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF--EPNEISIVS 574
            +C  +  A +VF      ++ +WN MI  +S+N     AL LF  +++  +PN I++  
Sbjct: 398 AKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMAC 457

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           IL AC  L  L  G++IHGH+   GF  +  +++AL+DMY  C               K 
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W+ MI+ YG HG G EAI  F+EM NSGI P + S IS+L ACSHSGL+DEG  ++N
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFN 577

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            M     + P++EH+ CIVD+L R+G L +AY+FIK +PI+P   +WGA+L  C  + D 
Sbjct: 578 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDV 637

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           K+ ++VAE +F+LEPEN GYY+ L+N+Y    +W++  ++
Sbjct: 638 KLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKL 677



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 202/411 (49%), Gaps = 37/411 (9%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMH------------------CADTVSWNTIMSGCLH 151
           L N+ +N YAK G+   S   F  M                     D +SWN+++SG + 
Sbjct: 169 LWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVS 228

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   EK L  F +M   G   D  ++ S VA  +  G L  G+ +H   IK  +     +
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF--GKEL 286

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           ++ N L+ MYS+ G++ +A + F  M  + VVSW ++I G+A  G  + +  L HEM+  
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME-K 345

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             + PDI T+ T++  CA + LL  G+ VH Y     +  DL + N+LMD Y+K  S+  
Sbjct: 346 EGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGD 405

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F+ +  + D+VSWN+MI G            LF EM Y     S  T+  ILP+C 
Sbjct: 406 AHSVFSEMQ-VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSI-TMACILPACA 463

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  +LE G+ IH   L+ GFS +    NAL+ MY+ CG L  A  L   I    D   W 
Sbjct: 464 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPE-KDLVSWT 522

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           ++I     +G+  EAI  F  M +     PD V+ ++++ AC +  L  EG
Sbjct: 523 VMIAGYGMHGYGSEAIAAFNEM-RNSGIEPDEVSFISILYACSHSGLLDEG 572



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 214/444 (48%), Gaps = 28/444 (6%)

Query: 20  VSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLII 79
           +   ES+  LF E  ++DV++WN+MI+  V N     GL  F +M+  GI  D  T++ +
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           V+  +    L  GR +H  +IKA    + +L N  ++MY+K G+LNS+   F  M     
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSV 317

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW ++++G       +  +  F EM   G   D  ++++ + A AC G L  GK +H  
Sbjct: 318 VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNY 377

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
             +   +   +VS  N+L+ MY++CG +  A   F  M  KD+VSWN +I G++ N    
Sbjct: 378 IKENKMQSDLFVS--NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA +L  EMQ   + +P+  T+  ++  CA    L  G+ +HG+ +R     D  + N+L
Sbjct: 436 EALNLFVEMQY--NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANAL 493

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFS 367
           +D Y K  +L  A LLF+ I P  DLVSW  MI+G             F EM     +  
Sbjct: 494 VDMYLKCGALGLARLLFDMI-PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPD 552

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN------TIGVNALMHMYINCGDLVA 421
             + ++IL +C+    L+ G     W       NN      +     ++ +    G+L  
Sbjct: 553 EVSFISILYACSHSGLLDEG-----WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSK 607

Query: 422 AFSLLQRISHNSDTSCWNIVIVAC 445
           A+  ++ +    D + W  ++  C
Sbjct: 608 AYKFIKMMPIEPDATIWGALLCGC 631



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 222/475 (46%), Gaps = 73/475 (15%)

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGD----------- 226
           S +   A L  +  G+ IH++   +   D     V  S L+ MY  CGD           
Sbjct: 106 SVLQLCADLKSIQDGRRIHSI---IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 227 --------------------------------------IEAAERAFWGMTCKDVVSWNAI 248
                                                 +E+A + F  +  +DV+SWN++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG  E+  DL  +M L+  +  D+AT+V++++ C+++ +L  GR++HGYAI+  
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLL-GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
            G +L + N L+D YSKS +L+ A  +F  +     +VSW SMI+G            LF
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE-RSVVSWTSMIAGYAREGLSDMSVRLF 340

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM          T+  IL +C     LE GK +H +  +    ++    NALM MY  C
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC 400

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A S+   +    D   WN +I   ++N    EA+  F  M  Q N+ P+S+T+  
Sbjct: 401 GSMGDAHSVFSEM-QVKDIVSWNTMIGGYSKNSLPNEALNLFVEM--QYNSKPNSITMAC 457

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +L     G+ +HG  L++   LD  V NAL+ MY +C  +  A  +F+     +
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517

Query: 537 LCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
           L +W  MI+ +  +     A+  F   R+   EP+E+S +SIL AC+  G+L  G
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 174/364 (47%), Gaps = 27/364 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   L  +  LL  YS      S++ +F     + VV+W +MI          M +  F 
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM +EGI  D  T+  I+ A      L+ G+ VH    +  M +D  + N  ++MYAKCG
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +   FS M   D VSWNT++ G   N+ P + L  F EM ++  + ++++++  + 
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILP 460

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L  L  G+ IH   ++ G+    +V+  N+L+ MY +CG +  A   F  +  KD+
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVA--NALVDMYLKCGALGLARLLFDMIPEKDL 518

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL EG     
Sbjct: 519 VSWTVMIAGYGMHGYGSEAIAAFNEMR-NSGIEPDEVSFISILYACSHSGLLDEG----- 572

Query: 303 YAIRRLLGYDLLMMNS------------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
                  G+  +M N+            ++D  +++ +LSKA      +    D   W +
Sbjct: 573 ------WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGA 626

Query: 351 MISG 354
           ++ G
Sbjct: 627 LLCG 630


>gi|302803901|ref|XP_002983703.1| hypothetical protein SELMODRAFT_118828 [Selaginella moellendorffii]
 gi|300148540|gb|EFJ15199.1| hypothetical protein SELMODRAFT_118828 [Selaginella moellendorffii]
          Length = 963

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 222/810 (27%), Positives = 393/810 (48%), Gaps = 50/810 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +    +L+  Y      + + ++F     +  V+WN M++A        M L  F
Sbjct: 149 GLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTSVSWNVMLSAHARQGNFQMSLIVF 208

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAK 120
             M  +G + ++ T L ++ +   +  L+ G++VH  +  + G + D  + +  VNMY K
Sbjct: 209 RLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSNIQEQIGEL-DPQVGDAVVNMYGK 267

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG +  +   F    H    VSWN++++    N   E+    FR M   G   +  +  +
Sbjct: 268 CGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQLQGFHPNFATFVN 327

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +     L  L+ G  ++ +  +  +   P + +  +L++MYS CG+++AA +   G   
Sbjct: 328 LLHGCTDLEALAEGDAVYGMVAETEFHSEPGIEI--ALVNMYSSCGELDAAYQILQG--- 382

Query: 240 KDVVS--WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +D VS  W++ +   A  G   E   +L  +QL   + P+   +V+ +S C     LR G
Sbjct: 383 RDDVSLPWSSFLRATARYGYSNETLAVLRRIQL-NGIFPNTTALVSGLSACVAPGFLRSG 441

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
             +H   +   + + L++  +L   Y K  SL  A LLF+ +    D V+WN+++S    
Sbjct: 442 TGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHARLLFDGMV-QRDSVAWNAIMSLYSS 500

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+ ML    +F+ ++   +L S   P  L  G+S+H    +  +  + + 
Sbjct: 501 YGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMASQKNYDEDDVV 560

Query: 406 VNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             AL+ MY   G L  A  +  R+S     T+ W  +I AC ++  F +A   F+ M Q 
Sbjct: 561 AGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREFADAQLLFRRM-QL 619

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +   PDS TL    +   +LE+      L+  A +  +  + R+ NAL+  YG   ++  
Sbjct: 620 EGVLPDSFTLACAAAVVNSLEMTL----LNVAARQRSLDNNVRLCNALVEAYGSKGELDK 675

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ 581
           A  +FES       +W+ +I+A ++N    + L L+  +  E   P+++S+++ L  C+ 
Sbjct: 676 ALDMFESTEEKTQTSWSLVITAATENARHHQGLALYHQMLLEGYRPDKVSLLAALGVCSS 735

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------WSSM 626
           L  L+ G++IH  V   G + +  ++SAL+DMY  C S  A               W+S+
Sbjct: 736 LASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGSLEASRAVFQRSEKQDPVLWNSL 795

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           ++     G   +A+ LFH M   G+R   +S +SLL+ACSH+G+ D+   Y+  M  ++ 
Sbjct: 796 LAVEARCGG--DALRLFHWMQQDGLRSDGASFVSLLAACSHAGVEDKAWDYFAAMKWDFG 853

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           V P +EH  C+VD+L R+GKL+ A E I    ++    +W  +L+AC+ +GD   G++  
Sbjct: 854 VVPASEHFGCMVDLLARTGKLEAAEELIFKSRLRLDSRLWITLLAACNANGDVSRGERAG 913

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDA 776
                L+P+N G Y++L NM+ A GR +DA
Sbjct: 914 MNALVLDPQNSGLYVTLGNMFAAAGREQDA 943



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 200/762 (26%), Positives = 343/762 (45%), Gaps = 43/762 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHF 60
           GF       TSL+  Y      E +  +F E     +VVTW  +ITA  E+      +  
Sbjct: 47  GFDIEDRIGTSLVNMYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDL 106

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F     EG+  D T+ L +V+A      L  GR+   L  +AG+ AD  L N  VNMY  
Sbjct: 107 FHRTQLEGVLLDKTSFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGL 166

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  ++ +   F  +    +VSWN ++S        +  L+ FR M   G + + ++  + 
Sbjct: 167 CHSVDEACSVFDSIQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAV 226

Query: 181 VAASACLGELSYGKVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT- 238
           + + A +G L  GK++H+ +  ++G  D     V +++++MY +CG +E A R F     
Sbjct: 227 LESCAAVGSLETGKLVHSNIQEQIGELDP---QVGDAVVNMYGKCGAVEEAARVFDEQGH 283

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            + VVSWN++I  F LN   EEAF     MQL +   P+ AT V L+  C D   L EG 
Sbjct: 284 RRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQL-QGFHPNFATFVNLLHGCTDLEALAEGD 342

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL-VSWNSMIS---- 353
           +V+G         +  +  +L++ YS    L  A   +  +   +D+ + W+S +     
Sbjct: 343 AVYGMVAETEFHSEPGIEIALVNMYSSCGELDAA---YQILQGRDDVSLPWSSFLRATAR 399

Query: 354 -GLFKEMLYLCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            G   E L +  +          + L++ L +C +P  L  G  IH   L+ G  ++ + 
Sbjct: 400 YGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVV 459

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL  MY  C  L  A  L   +    D+  WN ++   +  G  +  I+ F+SM  Q+
Sbjct: 460 ATALFVMYGKCKSLDHARLLFDGMVQR-DSVAWNAIMSLYSSYGRHEGVIELFRSML-QE 517

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
               +  +   V+S+     +   G+S+H +A +     D  V  AL+TMY R   ++ A
Sbjct: 518 GVRFNRASFCIVLSSLVYPAMLLIGESVHSMASQKNYDEDDVVAGALVTMYARLGKLEKA 577

Query: 526 STVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC- 579
             +F+  S    +   W  MISA  +++    A  LFR ++ E   P+  ++    +   
Sbjct: 578 REIFDRVSAKEPSTALWTAMISACVEHREFADAQLLFRRMQLEGVLPDSFTLACAAAVVN 637

Query: 580 ----TQLGVLRHGKQIHGHVFHLGFQENSFISSA----LLDMYSNC--KSNAAWSSMISA 629
               T L V    + +  +V        ++ S       LDM+ +   K+  +WS +I+A
Sbjct: 638 SLEMTLLNVAARQRSLDNNVRLCNALVEAYGSKGELDKALDMFESTEEKTQTSWSLVITA 697

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
              + +  + + L+H+M   G RP K S+++ L  CS    +  G + +  ++E   + P
Sbjct: 698 ATENARHHQGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEA-GLEP 756

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           +      +VDM G+ G L EA   +     +  P +W ++L+
Sbjct: 757 DEVVASALVDMYGKCGSL-EASRAVFQRSEKQDPVLWNSLLA 797



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 184/778 (23%), Positives = 336/778 (43%), Gaps = 84/778 (10%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQG-------RVVHCLSIKAGMIADSSLCNVFVN 116
           M+ EGIR ++TTL+ I+   +     K+G       +++  L    G   +  +    VN
Sbjct: 1   MLHEGIRPNATTLVTILKECSTDGSKKRGLWIASAGKLIESLVRDGGFDIEDRIGTSLVN 60

Query: 117 MYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           MY  CG L  +   F   H  ++ V+W  I++    + +  + +  F      G   D  
Sbjct: 61  MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKT 120

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           S  + V A A  G L  G++   L  + G E    V + N+L++MY  C  ++ A   F 
Sbjct: 121 SFLAVVNACADCGNLVAGRLAQRLVREAGLEAD--VVLGNTLVNMYGLCHSVDEACSVFD 178

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  +  VSWN ++   A  G F+ +  +   MQL    +P+  T + ++  CA    L 
Sbjct: 179 SIQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQL-DGFKPEAITFLAVLESCAAVGSLE 237

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            G+ VH     ++   D  + +++++ Y K  ++ +A  +F+       +VSWNSMI+  
Sbjct: 238 TGKLVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAF 297

Query: 356 FKEML----YLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
           F  +L    + C +         +F+T + +L  C   E+L  G +++    +  F +  
Sbjct: 298 FLNVLLEEAFRCFRTMQLQGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEP 357

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
               AL++MY +CG+L AA+ +LQ    +  +  W+  + A  + G+  E +   + + Q
Sbjct: 358 GIEIALVNMYSSCGELDAAYQILQ--GRDDVSLPWSSFLRATARYGYSNETLAVLRRI-Q 414

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
                P++  LV+ +SAC        G  +H L L++ +     V  AL  MYG+C+ + 
Sbjct: 415 LNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLD 474

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACT 580
            A  +F+     +   WN ++S +S        +ELFR +  E    N  S   +LS+  
Sbjct: 475 HARLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLV 534

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-----------------KSNAAW 623
              +L  G+ +H       + E+  ++ AL+ MY+                    S A W
Sbjct: 535 YPAMLLIGESVHSMASQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALW 594

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV-----------ISLLSACSHSGLVD 672
           ++MISA   H +  +A  LF  M   G+ P   ++           ++LL+  +    +D
Sbjct: 595 TAMISACVEHREFADAQLLFRRMQLEGVLPDSFTLACAAAVVNSLEMTLLNVAARQRSLD 654

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS-GKLQEAYEFI-----------KNLPI- 719
             ++  N ++E Y  + E +     +DM   +  K Q ++  +           + L + 
Sbjct: 655 NNVRLCNALVEAYGSKGELDK---ALDMFESTEEKTQTSWSLVITAATENARHHQGLALY 711

Query: 720 --------QPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISLSNMY 767
                   +P      A L  CS     K G+++ E + +  LEP+ V    +L +MY
Sbjct: 712 HQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEV-VASALVDMY 768


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 224/746 (30%), Positives = 362/746 (48%), Gaps = 45/746 (6%)

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            +F   +LL   ++L+    L  GR +H   +  G+ +D  +    +NMY KCG L S+  
Sbjct: 441  KFTFPSLLKTCASLSN---LYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQ 497

Query: 130  TFSGMH-----CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             F  M        D   WN ++ G     + E+ L  F  M   G + D  SLS  +   
Sbjct: 498  VFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGIC 557

Query: 185  ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
              L     G+ IH   I+  +E  PY+    +LI MYS C     A   F  +  + ++V
Sbjct: 558  NRLSWYMAGRQIHGYIIRNMFEGDPYLET--ALIGMYSSCSRPMEAWSLFGKLENRSNIV 615

Query: 244  SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            +WN +I GF  NG +E++ +L + +    + +   A+     + C+   +L  GR VH  
Sbjct: 616  AWNVMIGGFVENGMWEKSLEL-YSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCD 674

Query: 304  AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
             I+     D  +  SL+  Y+KS S+  A+ +F+ +    ++   N+MIS          
Sbjct: 675  VIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD-KEVELRNAMISAFIGNGRAYD 733

Query: 354  --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              GL+ +M    +     T+ ++L  C+   S +FG+++H   +K    +N    +AL+ 
Sbjct: 734  ALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLT 793

Query: 412  MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            MY  CG    A S+   +    D   W  +I    QN  F++A+  F++M +++    DS
Sbjct: 794  MYYKCGSTEDADSVFYTMKER-DVVAWGSMIAGFCQNRRFKDALDLFRAM-EKEGVKADS 851

Query: 472  VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
              + +VISA   LE    G  +HG A+K  +  D  V  +L+ MY +    +SA  VF S
Sbjct: 852  DVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSS 911

Query: 532  CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
              N NL  WN MIS +S N     ++ L   +    F  + +SI ++L A + +  L  G
Sbjct: 912  MPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG 971

Query: 589  KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
            K +H +   L    +  + +AL+DMY  C               ++   W+SMI+ YG H
Sbjct: 972  KTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSH 1031

Query: 634  GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
            G   EA+ LF EM  S   P + + ++L+++CSHSG+V+EGL  +  M  EY V P  EH
Sbjct: 1032 GNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEH 1091

Query: 694  HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            +  +VD+LGR+G+L +AY FI+ +PI     VW  +L AC  H + ++G+ VA+ L K+E
Sbjct: 1092 YASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKME 1151

Query: 754  PENVGYYISLSNMYVALGRWKDAVEI 779
            P     Y+ L N+Y  +  W  A  +
Sbjct: 1152 PARGSNYVPLLNLYGEVEMWDRAANL 1177



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 278/552 (50%), Gaps = 23/552 (4%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
            T+L+  YS+ S    + +LF +  N+ ++V WN MI   VEN      L  +     E  
Sbjct: 586  TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC 645

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            +  S +     +A +    L  GR VHC  IK     D  +C   + MYAK G +  ++ 
Sbjct: 646  KLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 705

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             F  +   +    N ++S  + N      L  + +M       D+ ++SS ++  + +G 
Sbjct: 706  VFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGS 765

Query: 190  LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              +G+ +HA  IK   + +  V++ ++L++MY +CG  E A+  F+ M  +DVV+W ++I
Sbjct: 766  YDFGRTVHAEVIKRSMQSN--VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 823

Query: 250  DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             GF  N +F++A DL   M+    V+ D   + ++IS       +  G  +HG+AI+R L
Sbjct: 824  AGFCQNRRFKDALDLFRAME-KEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGL 882

Query: 310  GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
              D+ +  SL+D YSK      AE++F+++ P  +LV+WNSMIS     GL +  + L  
Sbjct: 883  ESDVFVACSLVDMYSKFGFAESAEMVFSSM-PNKNLVAWNSMISCYSWNGLPEMSINLLP 941

Query: 365  Q-------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            Q           ++  +L + +S  +L  GK++H +Q++L   ++    NAL+ MY+ CG
Sbjct: 942  QILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 1001

Query: 418  DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
             L  A  + + +    +   WN +I     +G+ +EA++ FK M + + A PD VT + +
Sbjct: 1002 CLKYAQLIFENMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETA-PDEVTFLAL 1059

Query: 478  ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YN 534
            I++C +  +  EG +L  L ++   G++ R+++  +++ + GR   +  A +       +
Sbjct: 1060 ITSCSHSGMVEEGLNLFQL-MRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPID 1118

Query: 535  CNLCTWNCMISA 546
             +   W C++ A
Sbjct: 1119 ADRSVWLCLLFA 1130



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/602 (26%), Positives = 290/602 (48%), Gaps = 31/602 (5%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCN-----KDVVTWNAMITACVENRCVVMGLHFFGEM 64
            +TSL+  Y       S+L +F +         D+  WN +I    +      GL  F  M
Sbjct: 479  ATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRM 538

Query: 65   VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             E GIR D  +L I++    +++    GR +H   I+     D  L    + MY+ C   
Sbjct: 539  QELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRP 598

Query: 125  NSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F  + + ++ V+WN ++ G + N   EK L  +       E    VS S   A 
Sbjct: 599  MEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLA--KNENCKLVSASFTGAF 656

Query: 184  SACL-GE-LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +AC  GE L +G+ +H   IK+ ++D PY  V  SL++MY++ G +E A++ F  +  K+
Sbjct: 657  TACSHGEVLDFGRQVHCDVIKMNFQDDPY--VCTSLLTMYAKSGSVEDAKKVFDQVLDKE 714

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V   NA+I  F  NG+  +A  L ++M+   +   D  T+ +L+S C+       GR+VH
Sbjct: 715  VELRNAMISAFIGNGRAYDALGLYNKMKAGET-PVDSFTISSLLSGCSVVGSYDFGRTVH 773

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               I+R +  ++ + ++L+  Y K  S   A+ +F  +    D+V+W SMI+G       
Sbjct: 774  AEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE-RDVVAWGSMIAGFCQNRRF 832

Query: 355  -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 LF+ M     +     + +++ +    E++E G  IH + +K G  ++     +L
Sbjct: 833  KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892

Query: 410  MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            + MY   G   +A  +   +  N +   WN +I   + NG  + +I     +  Q     
Sbjct: 893  VDMYSKFGFAESAEMVFSSMP-NKNLVAWNSMISCYSWNGLPEMSINLLPQIL-QHGFYL 950

Query: 470  DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
            DSV++  V+ A  ++    +GK+LH   ++  +  D +V+NALI MY +C  +K A  +F
Sbjct: 951  DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 1010

Query: 530  ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
            E+    NL TWN MI+ +  +     A+ LF+ +   E  P+E++ ++++++C+  G++ 
Sbjct: 1011 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 1070

Query: 587  HG 588
             G
Sbjct: 1071 EG 1072



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 225/448 (50%), Gaps = 17/448 (3%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            TSLLT Y+     E +  +F +  +K+V   NAMI+A + N      L  + +M      
Sbjct: 688  TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 747

Query: 71   FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             DS T+  ++S  + +     GR VH   IK  M ++ ++ +  + MY KCG    ++  
Sbjct: 748  VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 807

Query: 131  FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            F  M   D V+W ++++G   N   +  L  FR M   G +AD+  ++S ++A   L  +
Sbjct: 808  FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 867

Query: 191  SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              G +IH   IK G E   +V+   SL+ MYS+ G  E+AE  F  M  K++V+WN++I 
Sbjct: 868  ELGHLIHGFAIKRGLESDVFVAC--SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 925

Query: 251  GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             ++ NG  E + +LL ++ L      D  ++ T++   +    L +G+++H Y IR  + 
Sbjct: 926  CYSWNGLPEMSINLLPQI-LQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 984

Query: 311  YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
             DL + N+L+D Y K   L  A+L+F  + P  +LV+WNSMI+G            LFKE
Sbjct: 985  SDLQVENALIDMYVKCGCLKYAQLIFENM-PRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 1043

Query: 359  MLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
            M    +     T LA++ SC+    +E G ++    +++ G         +++ +    G
Sbjct: 1044 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 1103

Query: 418  DLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             L  A+S ++ +  ++D S W  ++ AC
Sbjct: 1104 RLDDAYSFIRGMPIDADRSVWLCLLFAC 1131



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 159/297 (53%), Gaps = 3/297 (1%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            R   +++   ++LLT Y      E + ++FY    +DVV W +MI    +NR     L  
Sbjct: 779  RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 838

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            F  M +EG++ DS  +  ++SA   +  ++ G ++H  +IK G+ +D  +    V+MY+K
Sbjct: 839  FRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSK 898

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             G   S+E  FS M   + V+WN+++S    N  PE  +    ++   G   D+VS+++ 
Sbjct: 899  FGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTV 958

Query: 181  VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            + A + +  L  GK +HA  I+L       + V N+LI MY +CG ++ A+  F  M  +
Sbjct: 959  LVAVSSVAALLKGKTLHAYQIRLQIPSD--LQVENALIDMYVKCGCLKYAQLIFENMPRR 1016

Query: 241  DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            ++V+WN++I G+  +G  EEA  L  EM+   +  PD  T + LI+ C+ S ++ EG
Sbjct: 1017 NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETA-PDEVTFLALITSCSHSGMVEEG 1072



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 252/570 (44%), Gaps = 68/570 (11%)

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I      GK+ +A +L H      ++     T  +L+  CA    L  GR++H   +   
Sbjct: 413 IKALVQQGKYSQALEL-HSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAI------APMNDLVSWNSMISGLFK----- 357
           L  D  +  SL++ Y K   L  A  +F+ +      AP  D+  WN +I G FK     
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAP--DITVWNPVIDGYFKYGHFE 529

Query: 358 ----------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                     E+      +S S +L I   CN       G+ IH + ++  F  +     
Sbjct: 530 EGLAQFCRMQELGIRPDGYSLSIVLGI---CNRLSWYMAGRQIHGYIIRNMFEGDPYLET 586

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY +C   + A+SL  ++ + S+   WN++I    +NG ++++++ + S+ + +N 
Sbjct: 587 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELY-SLAKNENC 645

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
              S +     +AC + E+   G+ +H   +K     D  V  +L+TMY +   ++ A  
Sbjct: 646 KLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 705

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           VF+   +  +   N MISAF  N     AL L+  +   E   +  +I S+LS C+ +G 
Sbjct: 706 VFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGS 765

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMISA 629
              G+ +H  V     Q N  I SALL MY  C S                 AW SMI+ 
Sbjct: 766 YDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAG 825

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           +  + +  +A++LF  M   G++     + S++SA    GL  E ++   +++  + ++ 
Sbjct: 826 FCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVE-LGHLIHGFAIKR 880

Query: 690 ETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
             E  V     +VDM  + G  + A     ++P       W +M+S  S +G       +
Sbjct: 881 GLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NKNLVAWNSMISCYSWNG-------L 932

Query: 746 AELLFKLEPENV--GYY---ISLSNMYVAL 770
            E+   L P+ +  G+Y   +S++ + VA+
Sbjct: 933 PEMSINLLPQILQHGFYLDSVSITTVLVAV 962



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 209/441 (47%), Gaps = 34/441 (7%)

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           ++F+F +LL    +C S  +L  G++IH   + +G  ++     +L++MY+ CG L +A 
Sbjct: 440 AKFTFPSLLK---TCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSAL 496

Query: 424 SLLQRISHNSDT----SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +  ++S + D+    + WN VI    + GHF+E +  F  M Q+    PD  +L  V+ 
Sbjct: 497 QVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRM-QELGIRPDGYSLSIVLG 555

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN-CNLC 538
            C  L     G+ +HG  ++++   D  ++ ALI MY  C     A ++F    N  N+ 
Sbjct: 556 ICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIV 615

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHV 595
            WN MI  F +N    ++LEL+   + E  ++   S     +AC+   VL  G+Q+H  V
Sbjct: 616 AWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDV 675

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
             + FQ++ ++ ++LL MY+                 K     ++MISA+  +G+ ++A+
Sbjct: 676 IKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDAL 735

Query: 641 ELFHEMCNSGIRPTKSSVI-SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
            L+++M  +G  P  S  I SLLS CS  G  D G   +  +++   ++        ++ 
Sbjct: 736 GLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR-SMQSNVAIQSALLT 793

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           M  + G  ++A      +  +     WG+M++    +   +  K   +L   +E E V  
Sbjct: 794 MYYKCGSTEDADSVFYTMK-ERDVVAWGSMIAGFCQN---RRFKDALDLFRAMEKEGVKA 849

Query: 760 YISLSNMYVALGRWKDAVEIG 780
              +    ++ G   + VE+G
Sbjct: 850 DSDVMTSVISAGLGLENVELG 870


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 231/843 (27%), Positives = 398/843 (47%), Gaps = 125/843 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L     +T L + Y+  +  +++  +F ET + +V  WN+ + +    +     L  F
Sbjct: 31  GILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLF 90

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYA 119
             M+   G   D+ T+ I + A   +  L+ G+V+H  + K   I +D  + +  V +Y+
Sbjct: 91  HLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYS 150

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG +  +   F      DTV W ++++G   NN PE+ L  F +M              
Sbjct: 151 KCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM-------------- 196

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            V      G+L                      + NSL+++Y++ G  + A   F  M  
Sbjct: 197 -VMMDCFDGDLP---------------------LVNSLLNLYAKTGCEKIAANLFSKMPE 234

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SW+ +I  +A N    EA +L HEM + +  EP+  TVV+ +  CA S  L EG+ 
Sbjct: 235 KDVISWSTMIACYANNEAANEALNLFHEM-IEKRFEPNSVTVVSALQACAVSRNLEEGKK 293

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +H  A+ +    D++   +L+  Y+++                   +++ SM  G+F+ M
Sbjct: 294 IHKIAVWK----DVVSWVALLSGYAQNG------------------MAYKSM--GVFRNM 329

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    Q     ++ IL + +     +    +H + ++ GF++N     +L+ +Y  CG L
Sbjct: 330 LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSL 389

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ---------QQNASPD 470
             A  L + +    D   W+ +I A   +G   EA++ F  M Q         Q +  P 
Sbjct: 390 GDAVKLFKGMI-VRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQ 448

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMG--------------------------- 503
               + + S      + ++ K+ +  A    +G                           
Sbjct: 449 VQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQ 508

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            D+R+      MY     I +AS VFE   N     WN MI  F+ +   + +LEL+  +
Sbjct: 509 YDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKM 568

Query: 564 EFE----------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
             +          PN +SI+S+L AC  LG LR G+  H +V   GF+ +  +++A++DM
Sbjct: 569 MEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDM 628

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS C               K    WS+MI++YG HG G +AI+LF +M  +G+RP+  + 
Sbjct: 629 YSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF 688

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
             +LSACSHSGL++EG  Y+  M EE+ +  +  ++ C+VD+LGR+G+L EA + I+N+P
Sbjct: 689 TCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMP 748

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++P   +WG++L AC  H +  + +++A+ LF L+P + GY++ LSN+Y A  RW +  +
Sbjct: 749 VEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEK 808

Query: 779 IGK 781
           + K
Sbjct: 809 VRK 811



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 169/756 (22%), Positives = 304/756 (40%), Gaps = 171/756 (22%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN-TIMSGCLHNN 153
           +H    K G++ D+       ++YAKC  L ++   F      +   WN T+ S C    
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           + E   L+   +  +GE  DN ++  A+ A A L  L  GKVIH    K   E    + V
Sbjct: 83  WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA-KKNDEIGSDMFV 141

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            ++L+ +YS+CG +  A + F      D V W +++ G+  N   EEA  L  +M +M  
Sbjct: 142 GSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD- 200

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
                         C D                     DL ++NSL++ Y+K+     A 
Sbjct: 201 --------------CFDG--------------------DLPLVNSLLNLYAKTGCEKIAA 226

Query: 334 LLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSP 381
            LF+ + P  D++SW++MI+             LF EM+    + +  T+++ L +C   
Sbjct: 227 NLFSKM-PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 285

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +LE GK IH                                    +I+   D   W  +
Sbjct: 286 RNLEEGKKIH------------------------------------KIAVWKDVVSWVAL 309

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +    QNG   +++  F++M       PD+V +V +++A   L +  +   LHG  ++S 
Sbjct: 310 LSGYAQNGMAYKSMGVFRNML-SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG 368

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
              +  V  +LI +Y +C  +  A  +F+     ++  W+ MI+A+  +     ALE+F 
Sbjct: 369 FNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFD 428

Query: 562 HLEFEPNEISIVSILSACTQLGV---------------------------LRHGKQIHGH 594
            +      I ++  +++C Q+ +                           +R   +  GH
Sbjct: 429 QM------IQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGH 482

Query: 595 -------------------VFHLGFQENSFISSALLDMY-SNCKSNAA------------ 622
                              +F  G Q +S I +    MY S  + +AA            
Sbjct: 483 FWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCS 542

Query: 623 --WSSMISAYGYHGKGWEAIELFHEMC-------NSGIRPTKSSVISLLSACSHSGLVDE 673
             W+ MI  +   G+   ++EL+ +M        NSG+ P + S++S+L AC + G + +
Sbjct: 543 FLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRK 602

Query: 674 GLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           G  +++ +++   E+D+   T     I+DM  + G L  A         +     W AM+
Sbjct: 603 GEWFHSYVIQTGFEFDILVAT----AIMDMYSKCGSLDLARCLFDETAGKDLV-CWSAMI 657

Query: 731 SACSHHGDTKMGKQVAELLFK--LEPENVGYYISLS 764
           ++   HG  +    + + + K  + P +V +   LS
Sbjct: 658 ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 693



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 137/313 (43%), Gaps = 29/313 (9%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S   L+ +  +CN+  S+     +H    K G  ++T     L  +Y  C  L AA  + 
Sbjct: 3   SRQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
               H  +   WN  + +  +   ++E ++ F  M      +PD+ T+   + AC  L +
Sbjct: 60  DETPH-PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRM 118

Query: 487 AFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              GK +HG A K+  +G D  V +AL+ +Y +C  +  A  VFE     +   W  M++
Sbjct: 119 LELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVT 178

Query: 546 AFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
            + QN     AL LF  +     F+ +   + S+L+   + G     ++I  ++F     
Sbjct: 179 GYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGC----EKIAANLFS-KMP 233

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           E   IS               WS+MI+ Y  +    EA+ LFHEM      P   +V+S 
Sbjct: 234 EKDVIS---------------WSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 278

Query: 662 LSACSHSGLVDEG 674
           L AC+ S  ++EG
Sbjct: 279 LQACAVSRNLEEG 291


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 224/768 (29%), Positives = 375/768 (48%), Gaps = 71/768 (9%)

Query: 45  ITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM 104
           I + V+ R  +  L  + +      RF   +LL   ++L+    L+ G+ +H   I  G+
Sbjct: 28  IKSLVQQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSN---LQYGKTIHSSIITTGL 84

Query: 105 IADSSLCNVFVNMYAKCGDLNSSECTF-----SGMHCADTVSWNTIMSGCLHNNYPEKCL 159
            +D  + +  +N+Y KCG    +   F     SG+   D   WN+I+ G       E+ +
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
           + F  M  SG +                     GK IH+  ++      P++    +LI 
Sbjct: 145 VQFGRMQSSGYKE--------------------GKQIHSYIVRNMLNFDPFLET--ALID 182

Query: 220 MYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFD--LLHEMQLMRSVEP 276
            Y +CG    A   F  +  + ++V+WN +I GF  NG +E + +  LL + + ++ V  
Sbjct: 183 TYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVS- 241

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
             ++    +S C     +  G+ VH  AI+     D  +  SL+  Y K   +  AE +F
Sbjct: 242 --SSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVF 299

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS-TLLAILPSCNSPES 383
           N + P  ++  WN++IS             ++K+M  LC+  S S T+L +L S +    
Sbjct: 300 NEV-PDKEIELWNALISAYVGNGYAYDALRIYKQM-KLCTVLSDSFTILNVLTSSSMAGL 357

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            + G+ IH   +K    ++    +AL+ MY   GD   A S+   +    D   W  VI 
Sbjct: 358 YDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKER-DVVAWGSVIS 416

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QN  ++EA+  F++M +     PDS  + ++ISAC  LE    G ++HG  +KS + 
Sbjct: 417 GFCQNRKYKEALDFFRAM-EADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQ 475

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           LD  V ++L+ MY +    + A  +F      NL  WN +IS + +N     ++ LF  +
Sbjct: 476 LDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQV 535

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
              +  P+ +S  S+L+A + +  L  GK +HG++  L    +  + + L+DMY  C   
Sbjct: 536 LRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLL 595

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       K+  AW+SMI  YG HG+  +AIELF EM +SGI+P   + +SLLS+C
Sbjct: 596 KYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSC 655

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           +HSGL++EGL  +  M  ++ + P  EH+V IVD+ GR+G L +AY F+KN+P++P   +
Sbjct: 656 NHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSI 715

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           W ++L +C  H + ++G+ VA  L  +EP     Y+ L N+Y     W
Sbjct: 716 WLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELW 763



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 185/356 (51%), Gaps = 10/356 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   + +   ++LLT YS       + ++F     +DVV W ++I+   +NR     L F
Sbjct: 371 RPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDF 430

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  + ++ DS  +  I+SA T +  +  G  +H   IK+G+  D  + +  ++MY+K
Sbjct: 431 FRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSK 490

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G    +   FS M   + V+WN+I+S    NN P+  +  F ++  +    D+VS +S 
Sbjct: 491 FGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSV 550

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           +AA + +  L  GK +H   ++L     P+ + V N+LI MY +CG ++ A+  F  ++ 
Sbjct: 551 LAAISSVAALLKGKSVHGYLVRLWI---PFDLQVENTLIDMYIKCGLLKYAQHIFERISE 607

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K++V+WN++I G+  +G+  +A +L  EM+    ++PD  T ++L+S C  S L+ EG  
Sbjct: 608 KNLVAWNSMIGGYGSHGECSKAIELFDEMR-SSGIKPDDVTFLSLLSSCNHSGLIEEG-- 664

Query: 300 VHGYAIRRL-LGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +H + + ++  G +  M +  +++D Y ++  L  A      +    D   W S++
Sbjct: 665 LHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 191/586 (32%), Positives = 320/586 (54%), Gaps = 35/586 (5%)

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL-LHEMQLMRSVEPDIATVVTL 284
           +I+ A   F  +    VV WN +I  +A +G F+++  L LH +QL   V P   T   L
Sbjct: 56  EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQL--GVTPTNFTFPFL 113

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN- 343
           +  C+    L+ GR +H +A    L  DL +  +L+  Y+K   L +A+ LFN+I+  + 
Sbjct: 114 LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173

Query: 344 DLVSWNSMISG-----LFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIH 391
           D+V+WN+MI+      L  + ++  +Q        + STL++ILP+     +L  GK+IH
Sbjct: 174 DIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIH 233

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
            + ++  F +N +   AL+ MY  C  L  A  +   ++  +D  CW+ +I     +   
Sbjct: 234 AYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV-CWSAMIGGYVLHDSI 292

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            +A+  +  M      +P   TL  ++ AC  L     GK LH   +KS M LDT V N+
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPN 568
           LI+MY +C  + +A    +     +  +++ +IS   QN    +AL +FR ++     P 
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +++++L AC+ L  L+HG   HG+    GF  ++ I +A++DMYS C           
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFD 472

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               +   +W++MI  YG HG   EA+ LF E+   G++P   ++I++LSACSHSGLV E
Sbjct: 473 RMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTE 532

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G  ++++M + ++++P   H++C+VD+L R+G L EAY FI+ +P  P   +WGA+L+AC
Sbjct: 533 GKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAAC 592

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             H + +MG+QV++ +  L PE  G ++ +SN+Y ++GRW DA  I
Sbjct: 593 RTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYI 638



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 239/492 (48%), Gaps = 21/492 (4%)

Query: 16  AYSNVSYFESSLA--LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDS 73
           A  ++S  E  LA  +F +     VV WN MI     +      ++ +  M++ G+   +
Sbjct: 48  ARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTN 107

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            T   ++ A + +  L+ GR++H  +   G+  D  +    ++MYAKCG L  ++  F+ 
Sbjct: 108 FTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNS 167

Query: 134 M--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +     D V+WN +++    +    + +    +M  +G   ++ +L S +        L 
Sbjct: 168 ISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALH 227

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IHA  I+  + D+  V +  +L+ MY++C  +  A + F  +  K+ V W+A+I G
Sbjct: 228 QGKAIHAYYIRNFFFDN--VVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGG 285

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           + L+    +A  L  +M  +  + P  AT+ T++  CA    L+ G+ +H + I+  +  
Sbjct: 286 YVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDL 345

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + NSL+  Y+K   +  A    + +    D VS++++ISG            +F++M
Sbjct: 346 DTTVGNSLISMYAKCGIMDNAVGFLDEMIA-KDTVSYSAIISGCVQNGYAEKALLIFRQM 404

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T++A+LP+C+   +L+ G   H + +  GF+N+T   NA++ MY  CG +
Sbjct: 405 QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKI 464

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             +  +  R+  N D   WN +I+    +G   EA+  F+ + Q     PD VTL+ V+S
Sbjct: 465 TISREIFDRMQ-NRDIISWNTMIIGYGIHGLCVEALSLFQEL-QALGLKPDDVTLIAVLS 522

Query: 480 ACGNLELAFEGK 491
           AC +  L  EGK
Sbjct: 523 ACSHSGLVTEGK 534



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 244/518 (47%), Gaps = 39/518 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMGLH 59
           G    L  ST+LL  Y+   +   +  LF      ++D+V WNAMI A   +      +H
Sbjct: 137 GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIH 196

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              +M + G+  +S+TL+ I+  + Q N L QG+ +H   I+     +  L    ++MYA
Sbjct: 197 SVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYA 256

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           KC  L  +   F+ ++  + V W+ ++ G  LH++  +   LY   +   G      +L+
Sbjct: 257 KCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLA 316

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A A L +L  GK +H   IK G +     +V NSLISMY++CG ++ A      M 
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLD--TTVGNSLISMYAKCGIMDNAVGFLDEMI 374

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD VS++AII G   NG  E+A  +  +MQ    + P + T++ L+  C+    L+ G 
Sbjct: 375 AKDTVSYSAIISGCVQNGYAEKALLIFRQMQ-SSGIAPYLETMIALLPACSHLAALQHGT 433

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
             HGY + R    D  + N+++D YSK   ++ +  +F+ +    D++SWN+MI G    
Sbjct: 434 CCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQN-RDIISWNTMIIGYGIH 492

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF+E+  L  +    TL+A+L +C+    +  GK    W       +    +
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKY---W---FSSMSQNFNI 546

Query: 407 NALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
              M  YI   DL+A       A++ +QR+    +   W  ++ AC  + + +   +  K
Sbjct: 547 KPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSK 606

Query: 460 SMTQQQNASPDS----VTLVNVISACGNLELAFEGKSL 493
            +   Q   P+     V + N+ S+ G  + A   +S+
Sbjct: 607 KI---QLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSI 641



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 143/300 (47%), Gaps = 12/300 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL++ Y+     ++++    E   KD V+++A+I+ CV+N      L  F +M   GI  
Sbjct: 352 SLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAP 411

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T++ ++ A + +  L+ G   H  ++  G   D+S+CN  ++MY+KCG +  S   F
Sbjct: 412 YLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIF 471

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWNT++ G   +    + L  F+E+   G + D+V+L + ++A +  G ++
Sbjct: 472 DRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVT 531

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIID 250
            GK   +  +   +   P ++    ++ + ++ G+++ A      M    +V  W A++ 
Sbjct: 532 EGKYWFS-SMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLA 590

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPD-------IATVVTLISLCADSLLLREGRSVHGY 303
               +   E    +  ++QL+    P+       ++ + + +    D+  +R  +  HGY
Sbjct: 591 ACRTHKNIEMGEQVSKKIQLL---GPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGY 647



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 17/218 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF        +++  YS       S  +F    N+D+++WN MI     +   V  L  
Sbjct: 442 RGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSL 501

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR-----VVHCLSIKAGMIADSSLCNVFV 115
           F E+   G++ D  TL+ ++SA +    + +G+     +    +IK  M     +C   V
Sbjct: 502 FQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMA--HYIC--MV 557

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNNYP--EKCLLYFREMGWSGEQ 171
           ++ A+ G+L+ +      M     V  W  +++ C  H N    E+     + +G  G  
Sbjct: 558 DLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEG-- 615

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
             N  L S + +S  +G       I ++    GY+ SP
Sbjct: 616 TGNFVLMSNIYSS--VGRWDDAAYIRSIQRHHGYKKSP 651


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 222/752 (29%), Positives = 372/752 (49%), Gaps = 53/752 (7%)

Query: 70  RFDSTTLLIIVSALTQ----MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           RF   TL   +S L Q    +  L+QG+ VH   I   +  DS      + MYA CG  +
Sbjct: 24  RFLEETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFS 83

Query: 126 SSECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +    F  +    +    WN+I+S  +      + L ++ +M   G   D  +    V A
Sbjct: 84  NCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 143

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              L      + +      LG + + +V+  +SLI  Y + G I+ A + F  +  KD V
Sbjct: 144 CVALKNFKGIEFLSDTVSSLGMDCNEFVA--SSLIKAYLEYGKIDVAGKLFDRVLQKDCV 201

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WN +++G+A  G  +        M+ M  + P+  T   ++S+CA  LL+  G  +HG 
Sbjct: 202 IWNVMLNGYAKCGASDSVIKGFSLMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGL 260

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            +   L ++  + NSL+  YSK      A  LF  ++   D V+WN MISG         
Sbjct: 261 VVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS-RADTVTWNCMISGYVQSGLMEE 319

Query: 355 ---LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
               F EM+    L    +FS+LL   PS +  E+LE+ + IHC+ ++   S +    +A
Sbjct: 320 SLIFFYEMISSGVLPDAITFSSLL---PSVSKFENLEYCRQIHCYIMRHSISLDIFLTSA 376

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  Y  C  +  A  +  +  ++ D   +  +I     NG   +A++ F+ + + +  S
Sbjct: 377 LIDAYFKCRGVSMAQKIFSQ-CNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK-IS 434

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSAS 526
           P+ +TLV+++   G L     G+ LHG  +K   G D R  +  A+I MY +C  +  A 
Sbjct: 435 PNEITLVSILPVIGGLLALKLGRELHGFIIKK--GFDNRCNIGCAVIDMYAKCGRMNLAY 492

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLG 583
            +F      ++ +WN MI+  +Q+     A+++FR +       + +SI + LSAC  L 
Sbjct: 493 EIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLP 552

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
               GK IHG +       + +  S L+DMY+ C               K+  +W+S+I+
Sbjct: 553 SESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIA 612

Query: 629 AYGYHGKGWEAIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           AYG HGK  +++ LFHEM   SG RP + + + ++S C H G VDEG++++ +M ++Y +
Sbjct: 613 AYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI 672

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
           +P+ EH+ C+VD+ GR+G+L EAYE +K++P  P  GVWG +L A   H + ++ K  + 
Sbjct: 673 QPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASS 732

Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            L  L+P N GYY+ +SN +   G W+   ++
Sbjct: 733 RLMDLDPWNSGYYVLISNAHANTGEWESVTKV 764



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 278/582 (47%), Gaps = 36/582 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA---CVENRCVVMGLHFFGEMV 65
            ++SL+ AY      + +  LF     KD V WN M+     C  +  V+ G   F  M 
Sbjct: 171 VASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKG---FSLMR 227

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            + I  ++ T   ++S       +  G  +H L + +G+  + S+ N  ++MY+KCG  +
Sbjct: 228 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFD 287

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M  ADTV+WN ++SG + +   E+ L++F EM  SG   D ++ SS + + +
Sbjct: 288 DAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVS 347

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L Y + IH   ++  +  S  + +T++LI  Y +C  +  A++ F      DVV +
Sbjct: 348 KFENLEYCRQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVF 405

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I G+  NG   +A ++   +  ++ + P+  T+V+++ +    L L+ GR +HG+ I
Sbjct: 406 TAMISGYLHNGLNIDALEMFRWLVKVK-ISPNEITLVSILPVIGGLLALKLGRELHGFII 464

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
           ++       +  +++D Y+K   ++ A  +F  ++   D+VSWNSMI+            
Sbjct: 465 KKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK-RDIVSWNSMITRCAQSDNPSAAI 523

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            +F++M      F   ++ A L +C +  S  FGK+IH + +K   + +    + L+ MY
Sbjct: 524 DIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMY 583

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG+L AA ++   +   +  S WN +I A   +G  ++++  F  M ++    PD +T
Sbjct: 584 AKCGNLKAAMNVFDTMKEKNIVS-WNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQIT 642

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITMYGRCRDIKSA-S 526
            + +IS C ++     G    G+     M  D  +Q        ++ ++GR   +  A  
Sbjct: 643 FLEIISLCCHV-----GDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYE 697

Query: 527 TVFESCYNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEP 567
           TV    +  +   W  ++ A   +K  E+  +   R ++ +P
Sbjct: 698 TVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDP 739



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 47/291 (16%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF        +++  Y+       +  +F     +D+V+WN+MIT C ++      +  
Sbjct: 466 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDI 525

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   GI FD  ++   +SA   +     G+ +H   IK  +  D    +  ++MYAK
Sbjct: 526 FRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAK 585

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
           CG+L ++   F  M   + VSWN+I++   ++   +  L  F EM   SG + D ++   
Sbjct: 586 CGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFL- 644

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
                                                +IS+    GD++   R F  MT 
Sbjct: 645 ------------------------------------EIISLCCHVGDVDEGVRFFRSMTQ 668

Query: 240 KDVVS-----WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
              +      +  ++D F   G+  EA++ +  M       PD     TL+
Sbjct: 669 DYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPF----PPDAGVWGTLL 715


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 220/719 (30%), Positives = 360/719 (50%), Gaps = 42/719 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNN 153
           +H   +  G+ +D       +  YA+ G L+SS   F      D+  +  ++   L H+ 
Sbjct: 20  LHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHL 79

Query: 154 YPEKCLLYFREMGWSGEQADNVSL--SSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           + +   LY   +        N +    S + A + +G L  G+ +H   +K G      +
Sbjct: 80  FDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVI 139

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               SL+ MY + G +  A + F  +  +D+VSW++++  +  NG+  E  ++L  M + 
Sbjct: 140 G--TSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWM-VS 196

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V PD  T++++   C     LR  +SVHGY IR+ +  D  + NSL+  Y + + L  
Sbjct: 197 EGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRG 256

Query: 332 AELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCN 379
           A+ +F +++  +    W SMIS     G F+E +    +   S       T++++L  C 
Sbjct: 257 AKGMFESVSDPST-ACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCA 315

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               L+ GKS+HC+ L+       + +  ALM  Y  C  + +   LL  I  NS    W
Sbjct: 316 RLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIG-NSSVVSW 374

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I    + G  +EA+  F  M ++    PDS +L + ISAC        G+ +HG   
Sbjct: 375 NTLISIYAREGLNEEAMVLFVCMLEK-GLMPDSFSLASSISACAGASSVRFGQQIHGHVT 433

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K     D  VQN+L+ MY +C  +  A T+F+  +  ++ TWNCMI  FSQN   V AL+
Sbjct: 434 KRGFA-DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALK 492

Query: 559 LFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  + F   + NE++ +S + AC+  G L  GK IH  +   G Q++ +I +AL+DMY+
Sbjct: 493 LFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYA 552

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               KS  +WS+MI+AYG HG+   A  LF +M  S I+P + + ++
Sbjct: 553 KCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMN 612

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +LSAC H+G V+EG  Y+N+M  +Y + P  EH   IVD+L R+G +  AYE IK+    
Sbjct: 613 ILSACRHAGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQH 671

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
               +WGA+L+ C  HG   +   + + L ++   + GYY  LSN+Y   G W ++ ++
Sbjct: 672 IDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKV 730



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 182/627 (29%), Positives = 306/627 (48%), Gaps = 28/627 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST LL +Y+ +    SS  +F    + D   +  +I   + +      +  +   +++G 
Sbjct: 36  STKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGS 95

Query: 70  RFDSTTLLI---IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           R       +   ++ A++ +  L  GR VH   +K G+  D  +    + MY + G L+ 
Sbjct: 96  RLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSD 155

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D VSW+++++  + N  P + L   R M   G   D+V++ S   A   
Sbjct: 156 ARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGK 215

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           +G L   K +H   I+   E +   S+ NSLI MY QC  +  A+  F  ++      W 
Sbjct: 216 VGCLRLAKSVHGYVIR--KEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWT 273

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I     NG FEEA D   +MQ    VE +  T+++++  CA    L+EG+SVH + +R
Sbjct: 274 SMISSCNQNGCFEEAIDAFKKMQ-ESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILR 332

Query: 307 RLL-GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE-- 358
           R + G DL +  +LMDFY+    +S  E L   I   + +VSWN++IS     GL +E  
Sbjct: 333 REMDGADLDLGPALMDFYAACWKISSCEKLLCLIGN-SSVVSWNTLISIYAREGLNEEAM 391

Query: 359 MLYLC------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +L++C         SFS L + + +C    S+ FG+ IH    K GF++  +  N+LM M
Sbjct: 392 VLFVCMLEKGLMPDSFS-LASSISACAGASSVRFGQQIHGHVTKRGFADEFVQ-NSLMDM 449

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG +  A+++  +I   S  + WN +I   +QNG   EA+K F  M        + V
Sbjct: 450 YSKCGFVDLAYTIFDKIWEKSIVT-WNCMICGFSQNGISVEALKLFDEMC-FNCMDINEV 507

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T ++ I AC N     +GK +H   + S +  D  +  AL+ MY +C D+K+A  VF S 
Sbjct: 508 TFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSM 567

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
              ++ +W+ MI+A+  +     A  LF  +     +PNE++ ++ILSAC   G +  GK
Sbjct: 568 PEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGK 627

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSN 616
                +   G   N+   ++++D+ S 
Sbjct: 628 FYFNSMRDYGIVPNAEHFASIVDLLSR 654



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 256/549 (46%), Gaps = 19/549 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLL  Y  +     +  +F E   +D+V+W++++   VEN     GL     MV EG+ 
Sbjct: 141 TSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVG 200

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS T+L +  A  ++ CL+  + VH   I+  M  D+SL N  + MY +C  L  ++  
Sbjct: 201 PDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGM 260

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +    T  W +++S C  N   E+ +  F++M  S  + + V++ S +   A LG L
Sbjct: 261 FESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWL 320

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   ++    D   + +  +L+  Y+ C  I + E+    +    VVSWN +I 
Sbjct: 321 KEGKSVHCFILRREM-DGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLIS 379

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A  G  EEA  L   M L + + PD  ++ + IS CA +  +R G+ +HG+  +R   
Sbjct: 380 IYAREGLNEEAMVLFVCM-LEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFA 438

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D  + NSLMD YSK   +  A  +F+ I     +V+WN MI G            LF E
Sbjct: 439 -DEFVQNSLMDMYSKCGFVDLAYTIFDKIWE-KSIVTWNCMICGFSQNGISVEALKLFDE 496

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M + C   +  T L+ + +C++   L  GK IH   +  G   +     AL+ MY  CGD
Sbjct: 497 MCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGD 556

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +   +   S  S W+ +I A   +G    A   F  M  + +  P+ VT +N++
Sbjct: 557 LKTAQGVFNSMPEKSVVS-WSAMIAAYGIHGQITAATTLFTKMV-ESHIKPNEVTFMNIL 614

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNL 537
           SAC +     EGK          +  +     +++ +  R  DI  A  + +S C + + 
Sbjct: 615 SACRHAGSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDA 674

Query: 538 CTWNCMISA 546
             W  +++ 
Sbjct: 675 SIWGALLNG 683



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 213/478 (44%), Gaps = 40/478 (8%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           LR    +H + +   L  D L    L++ Y++  SL  + L+F    P  D   +  +I 
Sbjct: 14  LRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFET-HPSPDSFMFGVLIK 72

Query: 354 -----GLFKEMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
                 LF +++ L           +Q       +++ + +    L  G+ +H   +K G
Sbjct: 73  CYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTG 132

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
              + +   +L+ MY   G L  A  +   I    D   W+ V+    +NG  +E ++  
Sbjct: 133 LGTDHVIGTSLLGMYGELGCLSDARKVFDEI-RVRDLVSWSSVVACYVENGRPREGLEML 191

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           + M  +    PDSVT+++V  ACG +      KS+HG  ++  M  D  ++N+LI MYG+
Sbjct: 192 RWMVSE-GVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQ 250

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSI 575
           C  ++ A  +FES  + +   W  MIS+ +QN     A++ F+ +   E E N ++++S+
Sbjct: 251 CSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISV 310

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALLDMYSNC---------------KS 619
           L  C +LG L+ GK +H  +           +  AL+D Y+ C                S
Sbjct: 311 LCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSS 370

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W+++IS Y   G   EA+ LF  M   G+ P   S+ S +SAC+ +  V  G Q + 
Sbjct: 371 VVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHG 430

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           ++ +        ++   ++DM  + G +  AY     +  +     W  M+   S +G
Sbjct: 431 HVTKRGFADEFVQNS--LMDMYSKCGFVDLAYTIFDKI-WEKSIVTWNCMICGFSQNG 485



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 189/425 (44%), Gaps = 28/425 (6%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A L    +L+  Y+      S   L     N  VV+WN +I+           +  F  M
Sbjct: 338 ADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCM 397

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +E+G+  DS +L   +SA    + ++ G+ +H    K G  AD  + N  ++MY+KCG +
Sbjct: 398 LEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRG-FADEFVQNSLMDMYSKCGFV 456

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           + +   F  +     V+WN ++ G   N    + L  F EM ++    + V+  SA+ A 
Sbjct: 457 DLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQAC 516

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           +  G L  GK IH   +  G +   Y+    +L+ MY++CGD++ A+  F  M  K VVS
Sbjct: 517 SNSGYLLKGKWIHHKLVVSGVQKDLYID--TALVDMYAKCGDLKTAQGVFNSMPEKSVVS 574

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+A+I  + ++G+   A  L  +M +   ++P+  T + ++S C  +  + EG+      
Sbjct: 575 WSAMIAAYGIHGQITAATTLFTKM-VESHIKPNEVTFMNILSACRHAGSVEEGK------ 627

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
                       NS+ D+    N+           A + DL+S    I G ++ +   C 
Sbjct: 628 ---------FYFNSMRDYGIVPNA--------EHFASIVDLLSRAGDIDGAYEIIKSTCQ 670

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
               S   A+L  C     ++   +IH  +L+   +N+T     L ++Y   G+   +  
Sbjct: 671 HIDASIWGALLNGCRIHGRMDLIHNIH-KELREIRTNDTGYYTLLSNIYAEGGNWYESRK 729

Query: 425 LLQRI 429
           +  R+
Sbjct: 730 VRSRM 734



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 9/164 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L   T+L+  Y+     +++  +F     K VV+W+AMI A   +  +      F
Sbjct: 536 GVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLF 595

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +MVE  I+ +  T + I+SA      +++G+         G++ ++      V++ ++ 
Sbjct: 596 TKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRA 655

Query: 122 GDLNSS-ECTFSGMHCADTVSWNTIMSGC--------LHNNYPE 156
           GD++ + E   S     D   W  +++GC        +HN + E
Sbjct: 656 GDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKE 699


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 199/637 (31%), Positives = 341/637 (53%), Gaps = 40/637 (6%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +  S + A A L  LS+G  IH   +  G+    Y+S  +SL+++Y++ G +  A +
Sbjct: 45  DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS--SSLVNLYAKFGLLAHARK 102

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  +DVV W A+I  ++  G   EA  L++EM+  + ++P     VTL+ + +  L
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF-QGIKPG---PVTLLEMLSGVL 158

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            + + + +H +A+      D+ +MNS+++ Y K + +  A+ LF+ +    D+VSWN+MI
Sbjct: 159 EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM-EQRDMVSWNTMI 217

Query: 353 SGL-----FKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           SG        E+L L  +           T  A L    +   LE G+ +HC  +K GF 
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFD 277

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +     AL+ MY+ CG   A++ +L+ I  N D  CW ++I    + G  ++A+  F  
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVFSE 336

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M Q   +   S  + +V+++C  L     G S+HG  L+    LDT   N+LITMY +C 
Sbjct: 337 MLQS-GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP----NEISIVSIL 576
            +  +  +FE     +L +WN +IS ++QN    +AL LF  ++F+     +  ++VS+L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+  G L  GK IH  V     +  S + +AL+DMYS C               K   
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W  +I+ YG+HGKG  A+E++ E  +SG+ P     +++LS+CSH+G+V +GL+ +++M
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           + ++ V P  EH  C+VD+L R+ ++++A++F K    +P   V G +L AC  +G T++
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
              + E + +L+P + G+Y+ L + + A+ RW D  E
Sbjct: 636 EDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 244/525 (46%), Gaps = 35/525 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    S+SL+  Y+       +  +F E   +DVV W AMI        V       
Sbjct: 76  GFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLV 135

Query: 62  GEMVEEGIRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            EM  +GI+    TLL ++S    +TQ+ CL      H  ++  G   D ++ N  +N+Y
Sbjct: 136 NEMRFQGIKPGPVTLLEMLSGVLEITQLQCL------HDFAVIYGFDCDIAVMNSMLNLY 189

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSL 177
            KC  +  ++  F  M   D VSWNT++SG     N  E   L +R  G  G + D  + 
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTF 248

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            ++++ S  + +L  G+++H   +K G++   ++    +LI+MY +CG  EA+ R    +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETI 306

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KDVV W  +I G    G+ E+A  +  EM L    +     + ++++ CA       G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEM-LQSGSDLSSEAIASVVASCAQLGSFDLG 365

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
            SVHGY +R     D   +NSL+  Y+K   L K+ ++F  +    DLVSWN++ISG   
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-RDLVSWNAIISGYAQ 424

Query: 355 ---------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                    LF+EM +    Q    T++++L +C+S  +L  GK IHC  ++      ++
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ MY  CG L AA      IS   D   W I+I     +G    A++ +      
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFL-H 542

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
               P+ V  + V+S+C +      G    GL + S M  D  V+
Sbjct: 543 SGMEPNHVIFLAVLSSCSH-----NGMVQQGLKIFSSMVRDFGVE 582



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 218/464 (46%), Gaps = 22/464 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           GF   +    S+L  Y    +   +  LF +   +D+V+WN MI+  A V N   ++ L 
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +   M  +G+R D  T    +S    M  L+ GR++HC  +K G   D  L    + MY 
Sbjct: 234 Y--RMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG   +S      +   D V W  ++SG +     EK L+ F EM  SG    + +++S
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351

Query: 180 AVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            VA+ A LG    G  +H   ++ GY  D+P +   NSLI+MY++CG ++ +   F  M 
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL---NSLITMYAKCGHLDKSLVIFERMN 408

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D+VSWNAII G+A N    +A  L  EM+     + D  TVV+L+  C+ +  L  G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H   IR  +    L+  +L+D YSK   L  A+  F++I+   D+VSW  +I+G    
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFH 527

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIG 405
                   ++ E L+   + +    LA+L SC+    ++ G  I    ++  G   N   
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +  ++ +      +  AF   +            I++ AC  NG
Sbjct: 588 LACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/317 (21%), Positives = 139/317 (43%), Gaps = 26/317 (8%)

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
           T  +N  I   + +G  ++ + TF SM   +   PD+ T  +++ AC +L+    G S+H
Sbjct: 11  TKYFNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACASLQRLSFGLSIH 69

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              L +    D  + ++L+ +Y +   +  A  VFE     ++  W  MI  +S+     
Sbjct: 70  QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A  L   + F+   P  ++++ +LS   ++  L   + +H      GF  +  + +++L
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSML 186

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           ++Y  C               +   +W++MIS Y   G   E ++L + M   G+RP + 
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
           +  + LS       ++ G   +  +++  +DV  +      ++ M  + GK + +Y  ++
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLE 304

Query: 716 NLPIQPKPGVWGAMLSA 732
            +P       W  M+S 
Sbjct: 305 TIP-NKDVVCWTVMISG 320


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 226/774 (29%), Positives = 388/774 (50%), Gaps = 41/774 (5%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ-GRVVHCL 98
           +W   I+ CV              M E G+      L  +V+A  +    +  G  +H L
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
           + KAG++ +  +    +++Y     +  ++  F  M   + VSW  +M     N + E+ 
Sbjct: 70  TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA 129

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L Y+R M       +  + ++ V+    L +   G  + +  I  G +    VSV NSLI
Sbjct: 130 LGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQ--VSVANSLI 187

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           SM    G +  AE+ F+ M  +D VSWNA++  ++  G   ++F +  +M+    +  D 
Sbjct: 188 SMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDA 247

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T+ +LIS+CA S  +  G  VH   +R  L   + ++N+L++ YS +  L+ AE LF  
Sbjct: 248 TTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWN 307

Query: 339 IAPMNDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           ++   DL+SWN+MIS   +            ++L+        T  + L +C+SP +L  
Sbjct: 308 MS-RRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMD 366

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI--VA 444
           G+ +H   L+L   +N +  N+L+ MY  C  +  A  + Q + ++   SC NI+I   A
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC-NILIGSYA 425

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI-SACGNLELAFEGKSLHGLALKSLMG 503
             ++G   +A++ F  M + +    + +T+VN++ S   + +L   G  LH   + +   
Sbjct: 426 VLEDG--TKAMQVFFWMRRGE-VKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFL 482

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            D  V N+LITMY +C D++S++ VF+   N ++ +WN MI+A  Q+     +L+LF  +
Sbjct: 483 SDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDM 542

Query: 564 EFEPN---EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
             + N    I +   +S+   L  L  G Q+HG     G   +S + +A +DMY  C   
Sbjct: 543 RHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKM 602

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W+++IS Y  +G   EA E F  M + G  P   + ++LLSAC
Sbjct: 603 DEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSAC 662

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SH+GLVD+G+ YYN+M   + V P  +H VCIVD+LGR G+  EA +FI+++P+ P   +
Sbjct: 663 SHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLI 722

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           W ++LS+   H +  +G++ A+ L +L+P +   Y+ LSN+Y    RW D   +
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRV 776



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 180/605 (29%), Positives = 298/605 (49%), Gaps = 25/605 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +  +   +  LF+E   ++VV+W A++ A   N  +   L ++
Sbjct: 74  GLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYY 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E I  ++     +VS    +     G  V    I +G+    S+ N  ++M    
Sbjct: 134 RRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNL 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSA 180
           G ++ +E  F  M   DTVSWN ++S   H     K    F +M   G  + D  +L S 
Sbjct: 194 GRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSL 253

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A    +SYG  +H+L ++ G     Y+ V N+L++MYS  G +  AE  FW M+ +
Sbjct: 254 ISVCASSDYVSYGSGVHSLCLRTGLH--SYIPVVNALVNMYSSAGKLADAEFLFWNMSRR 311

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRS 299
           D++SWN +I  +  NG   +A   L   QL+ + E PD  T  + +  C+    L +GR 
Sbjct: 312 DLISWNTMISSYVQNGNNMDALKTLG--QLLHTNEGPDRMTFSSALGACSSPGALMDGRM 369

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VH   ++  L ++LL+ NSL+  Y K NS+  AE +F  + P +D+VS N +I       
Sbjct: 370 VHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQ-LMPNHDVVSCNILIGSYAVLE 428

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGV 406
                  +F  M     + ++ T++ IL S  S   L  +G  +H + +  GF ++    
Sbjct: 429 DGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVS 488

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N+L+ MY  CGDL ++ ++ QRI + S  S WN +I A  Q+GH +E++K F  M    N
Sbjct: 489 NSLITMYAKCGDLESSNNVFQRIINRSVVS-WNAMIAANVQHGHGEESLKLFMDMRHDGN 547

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              D + L   +S+  +L    EG  LHGL LK  +G D+ V NA + MYG+C  +    
Sbjct: 548 G-LDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEML 606

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG 583
            +           WN +IS +++      A E F+H+      P+ ++ V++LSAC+  G
Sbjct: 607 KMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666

Query: 584 VLRHG 588
           ++  G
Sbjct: 667 LVDKG 671


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 219/734 (29%), Positives = 367/734 (50%), Gaps = 60/734 (8%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L Q   +H   I    I+ + L N  ++ Y+K  + + +   F  M   + V+W T++S 
Sbjct: 64  LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG-EL-SYGKVIHALGIKLGYE 206
            L      K    F  M  S E+ +  +   AV   AC   EL S G  IH L ++ G E
Sbjct: 124 HLKYGSVSKAFEMFNHMRVSDERPNENTF--AVLLRACTNRELWSVGLQIHGLLVRCGLE 181

Query: 207 DSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
              +    +SL+ MY + GD +  A R F+G+  +DVV+WN +I GFA NG F     L 
Sbjct: 182 REKFAG--SSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLF 239

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM   + ++PD  T  +L+  C+   +L E   +HG   +     D+++ ++++D Y+K
Sbjct: 240 SEMWEEQGLKPDRITFASLLKCCS---VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAK 296

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              +S    +F+++   ++ V W+SMISG             FK+M     +     L +
Sbjct: 297 CRDVSSCRKIFDSMEKKDNFV-WSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSS 355

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
            L +C   E L  G  +H   +K G  N+    + L+++Y + G+L     L  RI  + 
Sbjct: 356 TLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID-DK 414

Query: 434 DTSCWNIVIVACTQNGH--------FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
           D   WN +I+A  + G         FQE  +T  +  Q Q A     TLV V+ +C    
Sbjct: 415 DIVAWNSMILAQARPGQGCGRCMQLFQELRRT--TFLQIQGA-----TLVAVLKSCEKDS 467

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G+ +H L +KS +   T V NAL+ MY  C+ I  A   F      +  +W+ +I 
Sbjct: 468 DLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIG 527

Query: 546 AFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQLGVLRHGKQIHGHVFHLGFQE 602
              QN+ E +ALEL + +  E    +  S+   +SAC+QL  +  GKQ+H      G+  
Sbjct: 528 TCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSC 587

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           + +I S+++DMY+ C                +   ++++IS Y +HGK  +AIE+  ++ 
Sbjct: 588 DVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLE 647

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
            +G+ P   + ++L+SACSH+G V+E    +  ML++Y ++P++EH+ C+VD  GR+G+L
Sbjct: 648 KNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRL 707

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +EAY+ ++          W  +LSAC +H + K+G++ A  + +L P +   YI LSN+Y
Sbjct: 708 EEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIY 764

Query: 768 VALGRWKDAVEIGK 781
           +  G W++A+   K
Sbjct: 765 IEEGNWEEALNCRK 778



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 189/683 (27%), Positives = 321/683 (46%), Gaps = 51/683 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +++    + +LL+ YS  S F  +  LF +  N++VVTW  +I++ ++   V      F 
Sbjct: 79  YISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFN 138

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M     R +  T  +++ A T       G  +H L ++ G+  +    +  V MY K G
Sbjct: 139 HMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGG 198

Query: 123 -DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW--SGEQADNVSLSS 179
            DL  +   F G+   D V+WN ++SG   N         F EM W   G + D ++ +S
Sbjct: 199 DDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEM-WEEQGLKPDRITFAS 257

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +   + L E+     IH +  K G E    V V ++++ +Y++C D+ +  + F  M  
Sbjct: 258 LLKCCSVLNEVMQ---IHGIVYKFGAEVD--VVVESAMVDLYAKCRDVSSCRKIFDSMEK 312

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD   W+++I G+ +N + EEA +   +M   R V+ D   + + +  C +   L  G  
Sbjct: 313 KDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQR-VKLDQHVLSSTLKACVEIEDLNTGVQ 371

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VHG  I+     D  + + L++ Y+    L   E LF+ I    D+V+WNSMI       
Sbjct: 372 VHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDD-KDIVAWNSMILAQARPG 430

Query: 355 --------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   LF+E+      Q   +TL+A+L SC     L  G+ IH   +K     +T+ 
Sbjct: 431 QGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLV 490

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NAL+HMY  C  +  AF     I    D+S W+ +I  C QN    +A++  K M   +
Sbjct: 491 GNALVHMYSECKQIDDAFKAFVDIVRKDDSS-WSSIIGTCKQNRMESKALELCKEML-DE 548

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             +  S +L   ISAC  L    EGK LH  A+KS    D  + +++I MY +C +I+ +
Sbjct: 549 GINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEES 608

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             VF+     N  T+N +IS ++ +    +A+E+   LE     PN ++ ++++SAC+  
Sbjct: 609 EKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHA 668

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G +               +E S + + +LD Y     +  +S ++ AYG  G+  EA ++
Sbjct: 669 GYV---------------EETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQI 713

Query: 643 FHEMCNSGIRPTKSSVISLLSAC 665
             +        ++S+  +LLSAC
Sbjct: 714 VQK------DGSESAWRTLLSAC 730



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 122/497 (24%), Positives = 233/497 (46%), Gaps = 29/497 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++++  Y+      S   +F     KD   W++MI+    N      ++FF +M  + ++
Sbjct: 288 SAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVK 347

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D   L   + A  ++  L  G  VH L IK G   D  + +V +N+YA  G+L   E  
Sbjct: 348 LDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKL 407

Query: 131 FSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLG 188
           FS +   D V+WN+ I++         +C+  F+E+  +   Q    +L + + +     
Sbjct: 408 FSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDS 467

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ IH+L +K       +  V N+L+ MYS+C  I+ A +AF  +  KD  SW++I
Sbjct: 468 DLPAGRQIHSLIVKSSL--CRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSI 525

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     N    +A +L  EM L   +     ++   IS C+  L + EG+ +H +AI+  
Sbjct: 526 IGTCKQNRMESKALELCKEM-LDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSG 584

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLC 363
              D+ + +S++D Y+K  ++ ++E +F+     N+ V++N++ISG       ++ + + 
Sbjct: 585 YSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNE-VTFNAIISGYAHHGKAQQAIEVL 643

Query: 364 SQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTIGVNALMHMY 413
           S+   +       T LA++ +C+    +E  ++ H + L   K      +   + L+  Y
Sbjct: 644 SKLEKNGVAPNHVTFLALMSACSHAGYVE--ETSHLFTLMLDKYKIKPKSEHYSCLVDAY 701

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ--QQNASPDS 471
              G L  A+ ++Q+   +   S W  ++ AC  + + +   K+   M +    + +P  
Sbjct: 702 GRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAP-Y 757

Query: 472 VTLVNVISACGNLELAF 488
           + L N+    GN E A 
Sbjct: 758 ILLSNIYIEEGNWEEAL 774


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 236/828 (28%), Positives = 414/828 (50%), Gaps = 61/828 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  L    +L+  Y+ V    S   +F E   +++V+W+ +I+    NR        F
Sbjct: 103 GFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELF 162

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMN--CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +MV +G   +      ++ A  +     LK G  +H L  K   + D +  NV ++MY 
Sbjct: 163 RKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYG 222

Query: 120 KC-GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF----REMGWSGEQADN 174
              G ++ +   F  +   + VS N+++S              F    +E+   G + + 
Sbjct: 223 NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNE 282

Query: 175 VSLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            +  S ++A+  L    L   + +     K G+    YV   ++L+S +++ G I  A+ 
Sbjct: 283 YTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVG--SALVSGFAKAGSIGYAKN 340

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M+ ++VVS N +I G     + EEA +L  EM+   SVE +  + + +++   +  
Sbjct: 341 IFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK--DSVELNPNSYMIILTAFPEFH 398

Query: 293 LL----REGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           +L    R+G  VH + IR  LL   + + N L++ Y+K  +++ A ++F  +    D V+
Sbjct: 399 VLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFR-LMDNKDSVT 457

Query: 348 WNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQL 395
           WNSMI+GL +   +L +  +F             T+++ L SC S   +  G+ +HC  L
Sbjct: 458 WNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGL 517

Query: 396 KLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQN-GHF 451
           KLG   +    NAL+ +Y  CG   +   AFSL+    H S    WN +I A   +    
Sbjct: 518 KLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVS----WNSLIGALADSEPSM 573

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EA+++F  M  +    P+ VT + +++A  +L L   GK +H L LK  +  DT ++NA
Sbjct: 574 LEAVESFLVM-MRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENA 632

Query: 512 LITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI 570
           L+  YG+C D+     +F    +  +  +WN MIS +  N+   +A+++   +  +   +
Sbjct: 633 LLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRL 692

Query: 571 ---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
              +  ++LSAC  +  L  G ++HG       + +  I SAL+DMY+ C          
Sbjct: 693 DGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFF 752

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                ++  +W+SMIS Y  HG G ++++LF +M   G  P   + + +LSACSH+GLV+
Sbjct: 753 EMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVN 812

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EG  ++++M E Y + P  EH  C+VD+LGR G+L +  +F+  +P++P   +W  +L A
Sbjct: 813 EGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGA 872

Query: 733 C--SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           C  ++  +T +G++ AE+L ++EP N   YI LSNMY + G+W D  +
Sbjct: 873 CCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAK 920



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 195/704 (27%), Positives = 336/704 (47%), Gaps = 75/704 (10%)

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
           K    +H    K G + D  LCN  +N+YA+ GDL S    F  M   + VSW+ ++SG 
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYED 207
             N  P +    FR+M   G   ++ +  S + A    GE  L +G  IH L  K  Y +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209

Query: 208 SPYVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              V+ +N LISMY    G ++ A RAF  +  +++VS N++I  +   G    AFD+  
Sbjct: 210 D--VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFS 267

Query: 267 EMQ---LMRSVEPDIATVVTLIS----------LCADSLLLREGRSVHGYAIRRLLGYDL 313
            MQ   +   ++P+  T  +LIS          +  + LL R  +S  G+       +DL
Sbjct: 268 TMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKS--GFL------HDL 319

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYL---- 362
            + ++L+  ++K+ S+  A+ +F  ++  N +VS N +I GL ++        L++    
Sbjct: 320 YVGSALVSGFAKAGSIGYAKNIFQKMSYRN-VVSLNGLIIGLVRQKRGEEAVELFMEMKD 378

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGK----SIHCWQLKLGFSNNTIGV-NALMHMYINCG 417
             + + ++ + IL +      LE GK     +H + ++ G  N  I + N L++MY  CG
Sbjct: 379 SVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCG 438

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  ++ R+  N D+  WN +I    QN  F EA+KTF+ M + +   P + T+++ 
Sbjct: 439 AINDA-CVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE-LYPSNFTMISA 496

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +S+C +L     G+ LH   LK  + LD  V NAL+ +YG C  +K     F    + + 
Sbjct: 497 LSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDH 556

Query: 538 CTWNCMISAFSQNKAE-VRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
            +WN +I A + ++   + A+E F       ++PN ++ ++IL+A + L +   GKQIH 
Sbjct: 557 VSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHA 616

Query: 594 HVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGW 637
            V       ++ I +ALL  Y  C                +   +W+SMIS Y ++    
Sbjct: 617 LVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLP 676

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A+++   M   G R    +  ++LSAC+    ++ G++ +        VR   E  + I
Sbjct: 677 KAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHG-----CSVRACLESDIVI 731

Query: 698 ----VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
               VDM  + G++  A  F + +P +     W +M+S  + HG
Sbjct: 732 GSALVDMYAKCGRIDYASRFFEMMPARNLYS-WNSMISGYARHG 774


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 218/709 (30%), Positives = 365/709 (51%), Gaps = 45/709 (6%)

Query: 107 DSSLCNVFVNMYAKCGDLN--SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
           ++S    F  +   CG     S E  F  M      +WNT++   + N  P   L  +  
Sbjct: 76  NNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 135

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M   G      S  + + A A L ++  G  +H+L +KLGY  + ++   N+L+SMY++ 
Sbjct: 136 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI--VNALVSMYAKN 193

Query: 225 GDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
            D+ AA R F G   K D V WN+I+  ++ +GK  E  +L  EM  M    P+  T+V+
Sbjct: 194 DDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH-MTGPAPNSYTIVS 252

Query: 284 LISLCADSLLLREGRSVHGYAIRRLL-GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
            ++ C      + G+ +H   ++      +L + N+L+  Y++   + +AE +      M
Sbjct: 253 ALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ---M 309

Query: 343 N--DLVSWNSMISGLFKEMLYLCSQFSFSTLLA------------ILPSCNSPESLEFGK 388
           N  D+V+WNS+I G  + ++Y  +   FS ++A            I+ +     +L  G 
Sbjct: 310 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 369

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H + +K G+ +N    N L+ MY  C           R+ H+ D   W  VI    QN
Sbjct: 370 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRM-HDKDLISWTTVIAGYAQN 428

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               EA++ F+ + +++    D + L +++ A   L+     K +H   L+  + LDT +
Sbjct: 429 DCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVI 486

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EF 565
           QN L+ +YG+CR++  A+ VFES    ++ +W  MIS+ + N  E  A+ELFR +     
Sbjct: 487 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 546

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
             + ++++ ILSA   L  L  G++IH ++   GF     I+ A++DMY+ C        
Sbjct: 547 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKA 606

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K    ++SMI+AYG HG G  A+ELF +M +  + P   S ++LL ACSH+GL
Sbjct: 607 VFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGL 666

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           +DEG  +   M  EY++ P  EH+VC+VDMLGR+  + EA+EF+K +  +P   VW A+L
Sbjct: 667 LDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALL 726

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +AC  H + ++G+  A+ L +LEP+N G  + +SN++   GRW D  ++
Sbjct: 727 AACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 775



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 204/772 (26%), Positives = 352/772 (45%), Gaps = 73/772 (9%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S   +F E  ++    WN MI A V N      L  +  M  EG+    ++   ++ A  
Sbjct: 97  SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH-CADTVSWN 143
           ++  ++ G  +H L +K G  +   + N  V+MYAK  DL+++   F G     D V WN
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           +I+S    +    + L  FREM  +G   ++ ++ SA+ A         GK IHA  +K 
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
               S  + V N+LI+MY++CG +  AER    M   DVV+WN++I G+  N  ++EA +
Sbjct: 277 STHSSE-LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 335

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
              +M +    + D  ++ ++I+       L  G  +H Y I+     +L + N+L+D Y
Sbjct: 336 FFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMY 394

Query: 324 SKSN---SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
           SK N    + +A L  +      DL+SW ++I+G            LF+++     +   
Sbjct: 395 SKCNLTCYMGRAFLRMHD----KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDE 450

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
             L +IL + +  +S+   K IHC  L+ G  +  I  N L+ +Y  C ++  A  + + 
Sbjct: 451 MILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ-NELVDVYGKCRNMGYATRVFES 509

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           I    D   W  +I +   NG+  EA++ F+ M  +   S DSV L+ ++SA  +L    
Sbjct: 510 IK-GKDVVSWTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALLCILSAAASLSALN 567

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +G+ +H   L+    L+  +  A++ MY  C D++SA  VF+      L  +  MI+A+ 
Sbjct: 568 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 627

Query: 549 QNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK---QIHGHVFHLGFQE 602
            +     A+ELF   RH    P+ IS +++L AC+  G+L  G+   +I  H + L    
Sbjct: 628 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 687

Query: 603 NSFISSALLDM--YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
             ++   L+DM   +NC                      +E F  +      PT     +
Sbjct: 688 EHYV--CLVDMLGRANC---------------------VVEAFEFVKMMKTEPTAEVWCA 724

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQEAYEFIKN 716
           LL+AC      + G      +LE   + P+   ++ +V  +    GR   +++    +K 
Sbjct: 725 LLAACRSHSEKEIGEIAAQRLLE---LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 781

Query: 717 LPIQPKPGV-WGAMLSAC--------SHHGDTKMGKQVAELLFKLEPENVGY 759
             ++  PG  W  M            SH    ++ ++++E+  KLE E VGY
Sbjct: 782 SGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE-VGY 832



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 225/490 (45%), Gaps = 27/490 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+       +  +  +  N DVVTWN++I   V+N      L FF +M+  G + 
Sbjct: 288 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 347

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  ++  I++A  +++ L  G  +H   IK G  ++  + N  ++MY+KC         F
Sbjct: 348 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 407

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             MH  D +SW T+++G   N+   + L  FR++     + D + L S + AS+ L  + 
Sbjct: 408 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 467

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             K IH   ++ G  D+    + N L+ +Y +C ++  A R F  +  KDVVSW ++I  
Sbjct: 468 IVKEIHCHILRKGLLDT---VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 524

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            ALNG   EA +L   M +   +  D   ++ ++S  A    L +GR +H Y +R+    
Sbjct: 525 SALNGNESEAVELFRRM-VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 583

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  +  +++D Y+    L  A+ +F+ I     L+ + SMI+             LF +M
Sbjct: 584 EGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKM 642

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYI 414
            +        + LA+L +C+    L+ G+       H ++L+    +    V+ L     
Sbjct: 643 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRA-- 700

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           NC  +V AF  ++ +        W  ++ AC  +   +      + + + +  +P ++ L
Sbjct: 701 NC--VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVL 758

Query: 475 V-NVISACGN 483
           V NV +  G 
Sbjct: 759 VSNVFAEQGR 768


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 189/625 (30%), Positives = 334/625 (53%), Gaps = 46/625 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           ++  K +HAL + LG      V +   L+++Y+  GD+  +   F  +  K++ SWN+++
Sbjct: 64  INVAKQLHALLLVLGKAQD--VVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMV 121

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +   G++ ++ D + E+  +  V PD  T   ++  C   L L +G  +H + ++   
Sbjct: 122 SAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGF 178

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS 364
            +D+ +  SL+  YS+  ++  A  +F  + P+ D+ SWN+MISG        E L +  
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDM-PVRDVGSWNAMISGFCQNGNVAEALRVLD 237

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           T+ ++LP C     +  G  +H + +K G  ++    NAL++MY   G
Sbjct: 238 RMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFG 297

Query: 418 DLVAAFSLLQRISHN---SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            L  A    QR+       D   WN +I A  QN     A+  FK M       PD +T+
Sbjct: 298 RLQDA----QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFV-GMRPDLLTV 352

Query: 475 VNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           V++ S  G L     G+++HG  ++   + +D  + NAL+ MY +   I  A  VFE   
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGK 589
           + ++ +WN +I+ ++QN     A++ +  +E      PN+ + VSIL A + +G L+ G 
Sbjct: 413 SRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGM 472

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           +IHG +       + F+++ L+DMY  C               +++  W+++IS+ G HG
Sbjct: 473 KIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHG 532

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G +A++LF +M   G++    + +SLLSACSHSGLVDE    ++ M +EY ++P  +H+
Sbjct: 533 HGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHY 592

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+ GR+G L++AY  + N+PIQ    +WG +L+AC  HG+ ++G   ++ L +++ 
Sbjct: 593 GCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDS 652

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
           ENVGYY+ LSN+Y  +G+W+ AV++
Sbjct: 653 ENVGYYVLLSNIYANVGKWEGAVKV 677



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 172/621 (27%), Positives = 297/621 (47%), Gaps = 56/621 (9%)

Query: 59  HFFGEMVEEGIRFDSTTLL-----------IIVSALTQMNCLKQGRVVHCLSIKAGMIAD 107
           HFF   ++  I  D                ++  + T +N  KQ   +H L +  G   D
Sbjct: 26  HFFSSSLQHKISHDPDNKNNKNNNVVVDFNLVFRSCTNINVAKQ---LHALLLVLGKAQD 82

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMG 166
             L    V +YA  GDL+ S  TF  +   +  SWN+++S  +    Y +        + 
Sbjct: 83  VVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLS 142

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
            SG + D  +    +   ACL  L+ G+ +H   +K+G+E   YV+   SLI +YS+ G 
Sbjct: 143 LSGVRPDFYTFPPVL--KACL-SLADGEKMHCWVLKMGFEHDVYVAA--SLIHLYSRFGA 197

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           +E A + F  M  +DV SWNA+I GF  NG   EA  +L  M+    V+ D  TV +++ 
Sbjct: 198 VEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK-TEEVKMDTVTVSSMLP 256

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           +CA S  +  G  VH Y I+  L  D+ + N+L++ YSK   L  A+ +F+ +  + DLV
Sbjct: 257 ICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGME-VRDLV 315

Query: 347 SWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           SWNS+I+            G FKEML++  +    T++++            G+++H + 
Sbjct: 316 SWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFV 375

Query: 395 LKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           ++  +    I + NAL++MY   G +  A ++ +++  + D   WN +I    QNG   E
Sbjct: 376 VRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP-SRDVISWNTLITGYAQNGLASE 434

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           AI  +  M + +   P+  T V+++ A  ++    +G  +HG  +K+ + LD  V   LI
Sbjct: 435 AIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLI 494

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
            MYG+C  ++ A ++F          WN +IS+   +    +AL+LF+ +     + + I
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHI 554

Query: 571 SIVSILSACTQLGVLRHGK----------QIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
           + VS+LSAC+  G++   +          +I  ++ H G   + F  +  L+   N  SN
Sbjct: 555 TFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSN 614

Query: 621 -------AAWSSMISAYGYHG 634
                  + W ++++A   HG
Sbjct: 615 MPIQADASIWGTLLAACRIHG 635



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 245/508 (48%), Gaps = 20/508 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL+  YS     E +  +F +   +DV +WNAMI+   +N  V   L   
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVL 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E ++ D+ T+  ++    Q N +  G +VH   IK G+ +D  + N  +NMY+K 
Sbjct: 237 DRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKF 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F GM   D VSWN+I++    N+ P   L +F+EM + G + D +++ S  
Sbjct: 297 GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLA 356

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +    L +   G+ +H   ++  + +   V + N+L++MY++ G I+ A   F  +  +D
Sbjct: 357 SIFGQLSDRRIGRAVHGFVVRCRWLEVDIV-IGNALVNMYAKLGSIDCARAVFEQLPSRD 415

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I G+A NG   EA D  + M+  R++ P+  T V+++   +    L++G  +H
Sbjct: 416 VISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIH 475

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  I+  L  D+ +   L+D Y K   L  A  LF  I P    V WN++IS        
Sbjct: 476 GRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEI-PQETSVPWNAIISSLGIHGHG 534

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIGVNA 408
                LFK+M     +    T +++L +C+    ++  +      Q +     N      
Sbjct: 535 EKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGC 594

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ ++   G L  A++L+  +   +D S W  ++ AC  +G+ +  + TF S    +  S
Sbjct: 595 MVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAE--LGTFASDRLLEVDS 652

Query: 469 PDS---VTLVNVISACGNLELAFEGKSL 493
            +    V L N+ +  G  E A + +SL
Sbjct: 653 ENVGYYVLLSNIYANVGKWEGAVKVRSL 680



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 181/661 (27%), Positives = 301/661 (45%), Gaps = 75/661 (11%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGI 69
           T L+T Y+ +     S   F     K++ +WN+M++A V        +    E++   G+
Sbjct: 87  TQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGV 146

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R D  T   ++ A      L  G  +HC  +K G   D  +    +++Y++ G +  +  
Sbjct: 147 RPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHK 203

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D  SWN ++SG   N    + L     M     + D V++SS +   A   +
Sbjct: 204 VFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSND 263

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G ++H   IK G E   +VS  N+LI+MYS+ G ++ A+R F GM  +D+VSWN+II
Sbjct: 264 VVGGVLVHLYVIKHGLESDVFVS--NALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSII 321

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RL 308
             +  N     A     EM L   + PD+ TVV+L S+       R GR+VHG+ +R R 
Sbjct: 322 AAYEQNDDPVTALGFFKEM-LFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRW 380

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
           L  D+++ N+L++ Y+K  S+  A  +F  + P  D++SWN++I+G  +  L   +  ++
Sbjct: 381 LEVDIVIGNALVNMYAKLGSIDCARAVFEQL-PSRDVISWNTLITGYAQNGLASEAIDAY 439

Query: 369 S-------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           +             T ++ILP+ +   +L+ G  IH   +K     +      L+ MY  
Sbjct: 440 NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGK 499

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L  A SL   I   +    WN +I +   +GH ++A++ FK M +      D +T V
Sbjct: 500 CGRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGHGEKALQLFKDM-RADGVKADHITFV 557

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +++SAC                  S  GL    Q    TM    R IK            
Sbjct: 558 SLLSAC------------------SHSGLVDEAQWCFDTMQKEYR-IKP----------- 587

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           NL  + CM+  F +     +A  L  ++  + +     ++L+AC          +IHG+ 
Sbjct: 588 NLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAAC----------RIHGNA 637

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMIS-AYGYHGKGWE-AIELFHEMCNSGIRP 653
             LG    +F S  LL++ S    N  +  ++S  Y   GK WE A+++     + G+R 
Sbjct: 638 -ELG----TFASDRLLEVDS---ENVGYYVLLSNIYANVGK-WEGAVKVRSLARDRGLRK 688

Query: 654 T 654
           T
Sbjct: 689 T 689


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 240/815 (29%), Positives = 400/815 (49%), Gaps = 51/815 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+ AY       S+  +F E   ++ V+W  +++    N      L F  +MV+EGI  
Sbjct: 41  NLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS 100

Query: 72  DSTTLLIIVSALTQMNCLKQ--GRVVHCLSIKAGMIADSSLCNVFVNMYAKC-GDLNSSE 128
           +    + ++ A  ++  +    GR +H L  K     D+ + NV ++MY KC G +  + 
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           C F  +   ++VSWN+I+S              F  M + G +    +  S V  +  L 
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220

Query: 189 E--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           E  +   + I     K G     +V   + L+S +++ G +  A + F  M  ++ V+ N
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVG--SGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL----CADSLLLREGRSVHG 302
            ++ G       EEA  L  +M  M  V P+ + V+ L S      A+ + L++GR VHG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 303 YAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
           + I   L+ + + + N L++ Y+K  S++ A  +F  +    D VSWNSMI+GL +   +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCF 396

Query: 362 LCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           + +   +             TL++ L SC S +  + G+ IH   LKLG   N    NAL
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-FQEAIKTFKSMTQQQNAS 468
           M +Y   G L     +   +  +   S WN +I A  ++     EA+  F +  Q+    
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGALARSERSLPEAVVCFLN-AQRAGQK 514

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            + +T  +V+SA  +L     GK +HGLALK+ +  +   +NALI  YG+C ++     +
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574

Query: 529 FES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGV 584
           F       +  TWN MIS +  N+   +AL+L   +      +      ++LSA   +  
Sbjct: 575 FSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L  G ++H        + +  + SAL+DMYS C               +++ +W+SMIS 
Sbjct: 635 LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694

Query: 630 YGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           Y  HG+G EA++LF  M   G   P   + + +LSACSH+GL++EG +++ +M + Y + 
Sbjct: 695 YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLA 754

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK--MGKQVA 746
           P  EH  C+ D+LGR+G+L +  +FI+ +P++P   +W  +L AC      K  +GK+ A
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAA 814

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           E+LF+LEPEN   Y+ L NMY A GRW+D V+  K
Sbjct: 815 EMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 201/722 (27%), Positives = 336/722 (46%), Gaps = 63/722 (8%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R  H    K  +  D  LCN  +N Y + GD  S+   F  M   + VSW  I+SG   N
Sbjct: 21  RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS--YGKVIHALGIKLGYEDSPY 210
              ++ L++ R+M   G  ++  +  S + A   +G +   +G+ IH L  KL Y     
Sbjct: 81  GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140

Query: 211 VSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           VS  N LISMY +C G +  A  AF  +  K+ VSWN+II  ++  G    AF +   MQ
Sbjct: 141 VS--NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198

Query: 270 L--MRSVEPDIATVVTLI-SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
               R  E    ++VT   SL    + L E   +     +  L  DL + + L+  ++KS
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKS 256

Query: 327 NSLSKAELLFNAIAPMNDLV-----------SWNSMISGLFKEM--LYLCSQFSFSTLLA 373
            SLS A  +FN +   N +             W    + LF +M  +   S  S+  LL+
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316

Query: 374 ILPSCNSPES--LEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRIS 430
             P  +  E   L+ G+ +H   +  G  +  +G+ N L++MY  CG +  A  +   ++
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            + D+  WN +I    QNG F EA++ +KSM ++ +  P S TL++ +S+C +L+ A  G
Sbjct: 377 -DKDSVSWNSMITGLDQNGCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLG 434

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           + +HG +LK  + L+  V NAL+T+Y     +     +F S    +  +WN +I A +++
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494

Query: 551 KAEV-RALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           +  +  A+  F + +    + N I+  S+LSA + L     GKQIHG        + +  
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554

Query: 607 SSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
            +AL+  Y  C                + N  W+SMIS Y ++    +A++L   M  +G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGK 706
            R       ++LSA +    ++ G++     +    VR   E  V +    VDM  + G+
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGME-----VHACSVRACLESDVVVGSALVDMYSKCGR 669

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE----PENVGYYIS 762
           L  A  F   +P++     W +M+S  + HG  +   ++ E + KL+    P++V +   
Sbjct: 670 LDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETM-KLDGQTPPDHVTFVGV 727

Query: 763 LS 764
           LS
Sbjct: 728 LS 729



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 175/354 (49%), Gaps = 5/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
           G   ++  S +L+T Y+   Y      +F      D V+WN++I A   + R +   +  
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F      G + +  T   ++SA++ ++  + G+ +H L++K  +  +++  N  +  Y K
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG+++  E  FS M    D V+WN+++SG +HN    K L     M  +G++ D+   ++
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A A +  L  G  +HA  ++   E    V V ++L+ MYS+CG ++ A R F  M  
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESD--VVVGSALVDMYSKCGRLDYALRFFNTMPV 682

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-R 298
           ++  SWN++I G+A +G+ EEA  L   M+L     PD  T V ++S C+ + LL EG +
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                +    L   +   + + D   ++  L K E     +    +++ W +++
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 200/629 (31%), Positives = 328/629 (52%), Gaps = 41/629 (6%)

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGDIEAAERAFWGMTCK 240
            A   CL E   GK++H++   +     P   V  + L+ MY  CG +    R F  +   
Sbjct: 462  AEHKCLQE---GKMVHSV---ISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD 515

Query: 241  D-VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            + V  WN ++  +A  G + E+  L  +MQ +  +  +  T   ++   A    + E + 
Sbjct: 516  NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKL-GITGNSYTFSCILKCFATLGRVGECKR 574

Query: 300  VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
            +HG   +   G    ++NSL+  Y KS  +  A  LF+ +    D+VSWNSMISG     
Sbjct: 575  IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGD-RDVVSWNSMISGCVMNG 633

Query: 355  -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                    F +ML L      +TL+  + +C +  SL  G+++H   +K  FS   +  N
Sbjct: 634  FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693

Query: 408  ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
             L+ MY  CG+L  A    +++   +  S W  +I A  + G + +AI+ F  M + +  
Sbjct: 694  TLLDMYSKCGNLNDAIQAFEKMGQKTVVS-WTSLIAAYVREGLYDDAIRLFYEM-ESKGV 751

Query: 468  SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            SPD  ++ +V+ AC       +G+ +H    K+ M L   V NAL+ MY +C  ++ A  
Sbjct: 752  SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811

Query: 528  VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--PNEISIVSILSACTQLGVL 585
            VF      ++ +WN MI  +S+N     AL+LF  ++ E  P+ I++  +L AC  L  L
Sbjct: 812  VFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAAL 871

Query: 586  RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
              G+ IHG +   G+     +++AL+DMY  C               K    W+ MIS  
Sbjct: 872  EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGC 931

Query: 631  GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
            G HG G EAI  F +M  +GI+P + +  S+L ACSHSGL++EG  ++N+M+ E ++ P+
Sbjct: 932  GMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPK 991

Query: 691  TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
             EH+ C+VD+L R+G L +AY  I+ +PI+P   +WGA+L  C  H D ++ ++VAE +F
Sbjct: 992  LEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVF 1051

Query: 751  KLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +LEP+N GYY+ L+N+Y    +W++  ++
Sbjct: 1052 ELEPDNAGYYVLLANIYAEAEKWEEVKKL 1080



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 245/467 (52%), Gaps = 17/467 (3%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +  V  WN M++   +       ++ F +M + GI  +S T   I+     +  + + + 
Sbjct: 515 DNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKR 574

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H    K G  + +++ N  +  Y K G+++S+   F  +   D VSWN+++SGC+ N +
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               L +F +M       D  +L ++VAA A +G LS G+ +H  G+K  +  S  V   
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACF--SREVMFN 692

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MYS+CG++  A +AF  M  K VVSW ++I  +   G +++A  L +EM+  + V
Sbjct: 693 NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEME-SKGV 751

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD+ ++ +++  CA    L +GR VH Y  +  +   L + N+LMD Y+K  S+ +A L
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811

Query: 335 LFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFS------TLLAILPSCNSPES 383
           +F+ I P+ D+VSWN+MI G  K     E L L ++          T+  +LP+C S  +
Sbjct: 812 VFSQI-PVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAA 870

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE G+ IH   L+ G+S+     NAL+ MY+ CG LV A  L   I    D   W ++I 
Sbjct: 871 LEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEK-DLITWTVMIS 929

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            C  +G   EAI TF+ M +     PD +T  +++ AC +  L  EG
Sbjct: 930 GCGMHGLGNEAIATFQKM-RIAGIKPDEITFTSILYACSHSGLLNEG 975



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 259/526 (49%), Gaps = 23/526 (4%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I+    +  CL++G++VH +    G+  +  L    V MY  CG L      F  +   +
Sbjct: 457 ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516

Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            V  WN +MS         + +  F++M   G   ++ + S  +   A LG +   K IH
Sbjct: 517 KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               KLG+    Y +V NSLI+ Y + G++++A + F  +  +DVVSWN++I G  +NG 
Sbjct: 577 GCVYKLGF--GSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
              A +   +M ++R V  D+AT+V  ++ CA+   L  GR++HG  ++     +++  N
Sbjct: 635 SHSALEFFVQMLILR-VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF--------- 368
           +L+D YSK  +L+ A   F  +     +VSW S+I+   +E LY  +   F         
Sbjct: 694 TLLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752

Query: 369 ---STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               ++ ++L +C    SL+ G+ +H +  K   +      NALM MY  CG +  A+ +
Sbjct: 753 PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             +I    D   WN +I   ++N    EA+K F  M  Q+ + PD +T+  ++ ACG+L 
Sbjct: 813 FSQIP-VKDIVSWNTMIGGYSKNSLPNEALKLFAEM--QKESRPDGITMACLLPACGSLA 869

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G+ +HG  L++    +  V NALI MY +C  +  A  +F+     +L TW  MIS
Sbjct: 870 ALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS 929

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
               +     A+  F+ +     +P+EI+  SIL AC+  G+L  G
Sbjct: 930 GCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG 975



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 218/466 (46%), Gaps = 36/466 (7%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF ++     SL+  Y      +S+  LF E  ++DVV+WN+MI+ CV N      L FF
Sbjct: 583  GFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFF 642

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +M+   +  D  TL+  V+A   +  L  GR +H   +KA    +    N  ++MY+KC
Sbjct: 643  VQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKC 702

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G+LN +   F  M     VSW ++++  +     +  +  F EM   G   D  S++S +
Sbjct: 703  GNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVL 762

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             A AC   L  G+ +H    K     +  + V+N+L+ MY++CG +E A   F  +  KD
Sbjct: 763  HACACGNSLDKGRDVHNYIRKNNM--ALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKD 820

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +VSWN +I G++ N    EA  L  EMQ  +   PD  T+  L+  C     L  GR +H
Sbjct: 821  IVSWNTMIGGYSKNSLPNEALKLFAEMQ--KESRPDGITMACLLPACGSLAALEIGRGIH 878

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            G  +R     +L + N+L+D Y K  SL  A LLF+ I P  DL++W  MISG       
Sbjct: 879  GCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMI-PEKDLITWTVMISGCGMHGLG 937

Query: 355  -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---- 405
                  F++M     +    T  +IL +C+    L  G     W    GF N+ I     
Sbjct: 938  NEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG-----W----GFFNSMISECNM 988

Query: 406  ------VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                     ++ +    G+L  A++L++ +    D + W  ++  C
Sbjct: 989  EPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGC 1034



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 230/525 (43%), Gaps = 60/525 (11%)

Query: 257 KFEEAFDLLHEMQLMR---SVEPDIATVVTLISLCADSLLLREGRSVH------GYAIRR 307
           KF E  DL + ++L+R     E D+    +++ LCA+   L+EG+ VH      G  I  
Sbjct: 427 KFCEVGDLRNAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEG 486

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
           +LG  L+ M      Y    +L +   +F+ I   N +  WN M+S     G ++E +YL
Sbjct: 487 VLGAKLVFM------YVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYL 540

Query: 363 CSQ----------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             +          ++FS +L    +          K IH    KLGF +    VN+L+  
Sbjct: 541 FKKMQKLGITGNSYTFSCILKCFATLGRVGEC---KRIHGCVYKLGFGSYNTVVNSLIAT 597

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G++ +A  L   +  + D   WN +I  C  NG    A++ F  M   +    D  
Sbjct: 598 YFKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR-VGVDLA 655

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLVN ++AC N+     G++LHG  +K+    +    N L+ MY +C ++  A   FE  
Sbjct: 656 TLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKM 715

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
               + +W  +I+A+ +      A+ LF  +E     P+  S+ S+L AC     L  G+
Sbjct: 716 GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGR 775

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H ++          +S+AL+DMY+ C               K   +W++MI  Y  + 
Sbjct: 776 DVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNS 835

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              EA++LF EM     RP   ++  LL AC     ++ G   +  +L        +E H
Sbjct: 836 LPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN---GYSSELH 891

Query: 695 V--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           V   ++DM  + G L  A      +P +     W  M+S C  HG
Sbjct: 892 VANALIDMYVKCGSLVHARLLFDMIP-EKDLITWTVMISGCGMHG 935


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 223/709 (31%), Positives = 350/709 (49%), Gaps = 71/709 (10%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGE 189
           F  +    TV WNTI+ G + NN P   LL++  M  S   + D+ + SS + A A    
Sbjct: 60  FDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARS 119

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-------------GDIEAAERAFWG 236
           L  GK +H   ++  +  S  V   NSL++MYS C              + +   R F  
Sbjct: 120 LKLGKALHCHVLRSHFGSSRIV--YNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  ++VV+WN +I  +    +  EAF +   M  M  + P   + V +            
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-GIRPTPVSFVNVFPAVWRMSDYDN 236

Query: 297 GRSVHGYAIRRLLGYDLL----MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              ++G  ++  LG D +    +++S +  Y++   +  A  +F+     N  V WN+MI
Sbjct: 237 ANVLYGLVVK--LGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV-WNTMI 293

Query: 353 SG------------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLG 398
            G            LF +++    QF     T L+ L + +  + LE G+ +H + LK  
Sbjct: 294 GGYVQNNCPIEAIDLFVQVME-SEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSS 352

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
                + +NA++ MY  CG +  +F +   +    D   WN ++ A  QNG   E +   
Sbjct: 353 TILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER-DVVTWNTMVSAFVQNGLDDEGLMLV 411

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK---SLMGLDTRVQNALITM 515
            +M Q+Q    DSVTL  ++S   NL     GK  H   ++      G+D+     LI M
Sbjct: 412 FAM-QKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSY----LIDM 466

Query: 516 YGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
           Y +   I +A  +FE  S Y+ +  TWN MI+ ++QN        +FR +      PN +
Sbjct: 467 YAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           ++ SIL AC  +G +  GKQIHG         N F+ +ALLDMYS               
Sbjct: 527 TLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAET 586

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K++  +++MIS+YG HG G  A+ LFH M  SGI+P   + +++LSACS++GLVDEGL
Sbjct: 587 LEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGL 646

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWGAMLSACS 734
           + + +M  EY ++P  EH+ C+ DMLGR G++ EAYEF+K L  +    G+WG++L AC 
Sbjct: 647 RIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACR 706

Query: 735 HHGDTKMGKQVAELLFKLEPEN--VGYYISLSNMYVALGRWKDAVEIGK 781
            HG+ ++GK VA  L ++E  +   GY++ LSN+Y A G W +   + K
Sbjct: 707 IHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRK 755



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 191/712 (26%), Positives = 315/712 (44%), Gaps = 54/712 (7%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIVSALT 84
           +L LF        V WN +I   + N   +  L F+  M      +FDS T    + A  
Sbjct: 56  ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC----------GDLNSSECT---F 131
           Q   LK G+ +HC  +++   +   + N  +NMY+ C           D N+ +     F
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + V+WNT++S  +      +    FR M   G +   VS  +   A   + +  
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYD 235

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
              V++ L +KLG +      V +S I MY++ G ++ A   F     ++   WN +I G
Sbjct: 236 NANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGYAIRRLL 309
           +  N    EA DL   +Q+M S +  +  V  L +L A S L  L  GR +H Y ++   
Sbjct: 296 YVQNNCPIEAIDLF--VQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSST 353

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
              ++++N+++  YS+  S+  +  +F+ +    D+V+WN+M+S     GL  E L L  
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLE-RDVVTWNTMVSAFVQNGLDDEGLMLVF 412

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       TL A+L   ++  S E GK  H + ++ G     +  + L+ MY   G
Sbjct: 413 AMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-SYLIDMYAKSG 471

Query: 418 DLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            +  A  L ++ S ++ D + WN +I   TQNG  +E    F+ M  +QN  P++VTL +
Sbjct: 472 LITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI-EQNVRPNAVTLAS 530

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC  +     GK +HG A++  +  +  V  AL+ MY +   I  A  VF      N
Sbjct: 531 ILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKN 590

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
             T+  MIS++ Q+    RAL LF  +     +P+ ++ V+ILSAC+  G++  G +I  
Sbjct: 591 SVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI-- 648

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
                 FQ       ++   Y    S   +  +    G  G+  EA E    +   G   
Sbjct: 649 ------FQ-------SMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEG--N 693

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           T     SLL AC   G  + G    N +LE       T +HV + ++    G
Sbjct: 694 TFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEG 745



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 227/468 (48%), Gaps = 25/468 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++   WN MI   V+N C +  +  F +++E E    D  T L  ++A++Q+  L+ GR 
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQ 343

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K+  I    + N  + MY++CG + +S   FS M   D V+WNT++S  + N  
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            ++ L+    M   G   D+V+L++ ++ ++ L     GK  HA  I+ G +   +  + 
Sbjct: 404 DDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ---FEGMD 460

Query: 215 NSLISMYSQCGDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + LI MY++ G I  A++ F   +   +D  +WNA+I G+  NG  EE F +  +M + +
Sbjct: 461 SYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKM-IEQ 519

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           +V P+  T+ +++  C     +  G+ +HG+AIR  L  ++ +  +L+D YSKS +++ A
Sbjct: 520 NVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYA 579

Query: 333 ELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNS 380
           E +F      N  V++ +MIS             LF  ML    +    T +AIL +C+ 
Sbjct: 580 ENVFAETLEKNS-VTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSY 638

Query: 381 PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCW 438
              ++ G  I    + +     +      +  M    G +V A+  ++ +    +T   W
Sbjct: 639 AGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIW 698

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACGN 483
             ++ AC  +G F+        + + +  S  +   V L N+ +A GN
Sbjct: 699 GSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGN 746


>gi|302814700|ref|XP_002989033.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
 gi|300143134|gb|EFJ09827.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
          Length = 806

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 227/796 (28%), Positives = 383/796 (48%), Gaps = 47/796 (5%)

Query: 17  YSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTT 75
           Y      E +  +F E     +VVTW  +ITA  E+      +  F     EG+  D T+
Sbjct: 2   YRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKTS 61

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
            L +V+A      L  GR+   L  +AG+ AD  L N  VNMY  C  ++ +   F  + 
Sbjct: 62  FLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQ 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
              +VSWN ++S        +  L+ FR M   G + + ++  + + + A +G L  GK+
Sbjct: 122 ERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKL 181

Query: 196 IHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFA 253
           +H+ +  ++G  D     V +++++MY +CG +E A R F      + VVSWN++I  F 
Sbjct: 182 VHSNIQEQIGELDP---QVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFF 238

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           LN   EEAF     MQL     P+ AT V L+  C D   L EG +V+G         + 
Sbjct: 239 LNVLLEEAFRCFRTMQL-EGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEP 297

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL-VSWNSMIS-----GLFKEMLYLCSQFS 367
            +  +L++ YS    L  A   +  +   +D+ + W+S +      G   E L +  +  
Sbjct: 298 GIEIALVNMYSSCGELDAA---YQILQGRDDVSLPWSSFLRATARYGYSNETLAVLRRIQ 354

Query: 368 F-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                   + L++ L +C +P  L  G  IH   L+ G  ++ +   AL  MY  C  L 
Sbjct: 355 LNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLD 414

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  L   +    D+  WN ++   +  G  +  I+ F+SM Q+     +  +   V+S+
Sbjct: 415 HARLLFDGMVQR-DSVAWNAIMSLYSSYGRHEGVIELFRSMLQE-GVRFNRASFCIVLSS 472

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE--SCYNCNLC 538
                +   G+S+H +A++     D  V  AL+TMY R   ++ A  +F+  S    +  
Sbjct: 473 LVYPAMLLIGESVHSMAIQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTA 532

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  MISA  +++   + L L+  +  E   P+++S+++ L  C+ L  L+ G++IH  V
Sbjct: 533 LWTAMISACVEHREHHQGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQV 592

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G + +  ++SAL+DMY  C               +    W+S+++     G   + +
Sbjct: 593 VEAGLEPDEVVASALVDMYGKCGGLEASRAVFQRSEKQDPVLWNSLLAVEARCGG--DTM 650

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LFH M   G+R   +S +SLL+ACSH+G+ D+   Y+  M  ++ V P +EH  C+VD+
Sbjct: 651 RLFHWMQQDGLRSDGASFVSLLAACSHAGVEDKAWDYFAAMKWDFGVVPASEHFGCMVDL 710

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           L R+GKL+ A E I    ++    +W  +L+AC+ +GD    ++       L+P+N G Y
Sbjct: 711 LARTGKLEAAEELIFKSRLRLDSRLWITLLAACNANGDVSRVERAGMNALVLDPQNSGLY 770

Query: 761 ISLSNMYVALGRWKDA 776
           ++L NM+ A GR +DA
Sbjct: 771 VTLGNMFAAAGREQDA 786



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/601 (23%), Positives = 276/601 (45%), Gaps = 27/601 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +    +L+  Y      + + ++F     +  V+WN M++A        M L  F
Sbjct: 89  GLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTSVSWNVMLSAHARQGNFQMSLIVF 148

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAK 120
             M  +G + ++ T L ++ +   +  L+ G++VH  +  + G + D  + +  VNMY K
Sbjct: 149 RLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSNIQEQIGEL-DPQVGDAVVNMYGK 207

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG +  +   F    H    VSWN++++    N   E+    FR M   G   +  +  +
Sbjct: 208 CGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQLEGFHPNFATFVN 267

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +     L  L+ G  ++ +  +  +   P + +  +L++MYS CG+++AA +   G   
Sbjct: 268 LLHGCTDLEALAEGDAVYGMVAETEFHSEPGIEI--ALVNMYSSCGELDAAYQILQG--- 322

Query: 240 KDVVS--WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +D VS  W++ +   A  G   E   +L  +QL   + P+   +V+ +S C     LR G
Sbjct: 323 RDDVSLPWSSFLRATARYGYSNETLAVLRRIQL-NGIFPNTTALVSGLSACVAPGFLRSG 381

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
             +H   +   + + L++  +L   Y K  SL  A LLF+ +    D V+WN+++S    
Sbjct: 382 TGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHARLLFDGMV-QRDSVAWNAIMSLYSS 440

Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+ ML    +F+ ++   +L S   P  L  G+S+H   ++  +  + + 
Sbjct: 441 YGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMAIQKNYDEDDVV 500

Query: 406 VNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             AL+ MY   G L  A  +  R+S     T+ W  +I AC ++    + +  +  M   
Sbjct: 501 AGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREHHQGLALYHQML-L 559

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +   PD V+L+  +  C +L     G+ +H   +++ +  D  V +AL+ MYG+C  +++
Sbjct: 560 EGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGGLEA 619

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAE-VRALELFRHLEFEPNEISIVSILSACTQLG 583
           +  VF+     +   WN +++  ++   + +R     +      +  S VS+L+AC+  G
Sbjct: 620 SRAVFQRSEKQDPVLWNSLLAVEARCGGDTMRLFHWMQQDGLRSDGASFVSLLAACSHAG 679

Query: 584 V 584
           V
Sbjct: 680 V 680



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 23/345 (6%)

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  A  + +     S+   W  +I A  ++GHF EAI  F   TQ +    D 
Sbjct: 1   MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHR-TQLEGVLLDK 59

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            + + V++AC +      G+    L  ++ +  D  + N L+ MYG C  +  A +VF+S
Sbjct: 60  TSFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDS 119

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
                  +WN M+SA ++      +L +FR ++   F+P  I+ +++L +C  +G L  G
Sbjct: 120 IQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETG 179

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGY 632
           K +H ++     + +  +  A+++MY  C                +S  +W+SMI+A+  
Sbjct: 180 KLVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFL 239

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +    EA   F  M   G  P  ++ ++LL  C+    + EG   Y  M+ E +   E  
Sbjct: 240 NVLLEEAFRCFRTMQLEGFHPNFATFVNLLHGCTDLEALAEGDAVY-GMVAETEFHSEPG 298

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
             + +V+M    G+L  AY+ ++       P  W + L A + +G
Sbjct: 299 IEIALVNMYSSCGELDAAYQILQGRDDVSLP--WSSFLRATARYG 341


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 205/718 (28%), Positives = 354/718 (49%), Gaps = 36/718 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L +K  +  DS L    VN+YAKC     +    + M   D VSW  ++ G + 
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +    +  F+EM   G   +  +L++ + A +    L  GK +HA   KLG     +V
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
              ++L+ +Y++CG+IE A + F GM  ++ V+WN +++G+A  G       L   M  +
Sbjct: 251 G--SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMEL 308

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V+ +  T+ T++  CA+S  L++G+ +H   I+     +  +   L+D YSK      
Sbjct: 309 -DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F  I    D+V W+++I+             LF  M    +  +  T+ ++L +  
Sbjct: 368 AIGVFKTIKK-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +  +L++G+SIH    K GF  +    NAL+ MY+  G +     L + +  + D   WN
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV-DRDLISWN 485

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
             +      G +   +  F  M ++    P+  T ++++ +C  L     G+ +H   +K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEE-GFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           + +  +  V  ALI MY +C  ++ A   F      +L TW  +I+ ++Q     +AL  
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR ++ E   PNE ++   LS C+ L  L  G+Q+H  VF  G   + F+ SAL+DMY+ 
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +   AW+++I  Y  +G+G +A+  F  M + GI P   +   +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH GLV+EG +++N+M  ++ + P  +H  C+VD+LGR GK  E  +FI+ + +  
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +W  +L A   H +  +G++ A  LF+L+PE    YI LSN++   GRW D   +
Sbjct: 785 NALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 167/595 (28%), Positives = 286/595 (48%), Gaps = 21/595 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            SL+  Y+   Y   +  +  +  ++DVV+W A+I   V        ++ F EM  EGI 
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   + A +    L  G+ +H  + K G++ D  + +  V++YAKCG++  +   
Sbjct: 211 PNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKM 270

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM   + V+WN +++G          L  F  M     + +  +L++ +   A    L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNL 330

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+VIH+L IK GYE + ++     L+ MYS+CG    A   F  +   D+V W+A+I 
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGC--GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT 388

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
                G+ EE+  L H M+L  ++ P+  T+ +L+S   ++  L+ G+S+H    +    
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTL-PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFE 447

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKE 358
            D+ + N+L+  Y K+  +     L+ ++    DL+SWN+ +SGL            F  
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLTIFYH 506

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML      +  T ++IL SC+    + +G+ +H   +K    +N     AL+ MY  C  
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A     R+S   D   W ++I    Q    ++A+  F+ M QQ+   P+  TL   +
Sbjct: 567 LEDADVAFNRLS-VRDLFTWTVIITNYAQTNQGEKALNYFRQM-QQEGVKPNEFTLAGCL 624

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S C +L     G+ LH +  KS    D  V +AL+ MY +C  ++ A  +FE+    +  
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
            WN +I  ++QN    +AL  FR +  E   P+ ++   ILSAC+  G++  GK+
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 238/502 (47%), Gaps = 18/502 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L   ++L+  Y+     E +  +F     ++ VTWN ++    +   V   L  F
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  ++ +  TL  ++        LKQG+V+H L IK G   +  +    V+MY+KC
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D V W+ +++        E+ +  F  M       +  ++ S +
Sbjct: 363 GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLL 422

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+   G L YG+ IHA   K G+E    V+V+N+L++MY + G +    + +  M  +D
Sbjct: 423 SAATNTGNLQYGQSIHACVWKYGFETD--VAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWNA + G    G ++    + + M L     P++ T ++++  C+    +  GR VH
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
            + I+  L  +  +  +L+D Y+K   L  A++ FN ++ + DL +W  +I+        
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQG 598

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F++M     + +  TL   L  C+S  SLE G+ +H    K G  ++    +AL
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A +L + +    DT  WN +I    QNG   +A+  F+ M   +  SP
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRR-DTIAWNTIICGYAQNGQGNKALTAFRMML-DEGISP 716

Query: 470 DSVTLVNVISACGNLELAFEGK 491
           D VT   ++SAC +  L  EGK
Sbjct: 717 DGVTFTGILSACSHQGLVEEGK 738



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 235/507 (46%), Gaps = 42/507 (8%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +++  CA    L   +++HG  ++ ++  D  +  SL++ Y+K    + A L+  A  P 
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVL-AKMPD 175

Query: 343 NDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSI 390
            D+VSW ++I GL  E     S + F             TL   L +C+   +L+ GK +
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H    KLG   +    +AL+ +Y  CG++  A  +   +   +D + WN+++    Q G 
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT-WNVLLNGYAQRGD 294

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
               +K F SM  + +   +  TL  V+  C N +   +G+ +H L +K     +  +  
Sbjct: 295 VTGVLKLFCSMM-ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---P 567
            L+ MY +C     A  VF++    ++  W+ +I+   Q      +++LF  +      P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNAA--W 623
           N+ +I S+LSA T  G L++G+ IH  V+  GF+ +  +S+AL+ MY  + C  +    +
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 624 SSMI-------SAY--GYHGKGW--EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
            SM+       +AY  G H  G     + +F+ M   G  P   + IS+L +CS    V 
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533

Query: 673 EGLQYYNNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
            G Q + ++++    + +  + VC  ++DM  +   L++A      L ++     W  ++
Sbjct: 534 YGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVII 589

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENV 757
              +++  T  G++      +++ E V
Sbjct: 590 ---TNYAQTNQGEKALNYFRQMQQEGV 613



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 15/303 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+   Y E +   F     +D+ TW  +IT   +       L++F +M +EG++
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S  + +  L+ G+ +H +  K+G ++D  + +  V+MYAKCG +  +E  
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DT++WNTI+ G   N    K L  FR M   G   D V+ +  ++A +  G +
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
             GK  H   +   +  SP V     ++ +  + G  +  E     M   ++ + W  ++
Sbjct: 735 EEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793

Query: 250 DGFALNGKF---EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
               ++      E+A + L E+Q      P+  +   L+S    ++   EGR      +R
Sbjct: 794 GASKMHNNLVLGEKAANKLFELQ------PEEESSYILLS----NIFATEGRWDDVKRVR 843

Query: 307 RLL 309
            L+
Sbjct: 844 SLM 846


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 205/718 (28%), Positives = 354/718 (49%), Gaps = 36/718 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L +K  +  DS L    VN+YAKC     +    + M   D VSW  ++ G + 
Sbjct: 131 AKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVA 190

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +    +  F+EM   G   +  +L++ + A +    L  GK +HA   KLG     +V
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
              ++L+ +Y++CG+IE A + F GM  ++ V+WN +++G+A  G       L   M  +
Sbjct: 251 G--SALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMEL 308

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V+ +  T+ T++  CA+S  L++G+ +H   I+     +  +   L+D YSK      
Sbjct: 309 -DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAID 367

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F  I    D+V W+++I+             LF  M    +  +  T+ ++L +  
Sbjct: 368 AIGVFKTIKK-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAAT 426

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +  +L++G+SIH    K GF  +    NAL+ MY+  G +     L + +  + D   WN
Sbjct: 427 NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV-DRDLISWN 485

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
             +      G +   +  F  M ++    P+  T ++++ +C  L     G+ +H   +K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEE-GFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIK 544

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           + +  +  V  ALI MY +C  ++ A   F      +L TW  +I+ ++Q     +AL  
Sbjct: 545 NQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR ++ E   PNE ++   LS C+ L  L  G+Q+H  VF  G   + F+ SAL+DMY+ 
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAK 664

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +   AW+++I  Y  +G+G +A+  F  M + GI P   +   +
Sbjct: 665 CGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGI 724

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH GLV+EG +++N+M  ++ + P  +H  C+VD+LGR GK  E  +FI+ + +  
Sbjct: 725 LSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQ 784

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +W  +L A   H +  +G++ A  LF+L+PE    YI LSN++   GRW D   +
Sbjct: 785 NALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 167/595 (28%), Positives = 286/595 (48%), Gaps = 21/595 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            SL+  Y+   Y   +  +  +  ++DVV+W A+I   V        ++ F EM  EGI 
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   + A +    L  G+ +H  + K G++ D  + +  V++YAKCG++  +   
Sbjct: 211 PNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKM 270

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM   + V+WN +++G          L  F  M     + +  +L++ +   A    L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNL 330

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+VIH+L IK GYE + ++     L+ MYS+CG    A   F  +   D+V W+A+I 
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGC--GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT 388

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
                G+ EE+  L H M+L  ++ P+  T+ +L+S   ++  L+ G+S+H    +    
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTL-PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFE 447

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKE 358
            D+ + N+L+  Y K+  +     L+ ++    DL+SWN+ +SGL            F  
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLTIFYH 506

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML      +  T ++IL SC+    + +G+ +H   +K    +N     AL+ MY  C  
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A     R+S   D   W ++I    Q    ++A+  F+ M QQ+   P+  TL   +
Sbjct: 567 LEDADVAFNRLS-VRDLFTWTVIITNYAQTNQGEKALNYFRQM-QQEGVKPNEFTLAGCL 624

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S C +L     G+ LH +  KS    D  V +AL+ MY +C  ++ A  +FE+    +  
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
            WN +I  ++QN    +AL  FR +  E   P+ ++   ILSAC+  G++  GK+
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 238/502 (47%), Gaps = 18/502 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L   ++L+  Y+     E +  +F     ++ VTWN ++    +   V   L  F
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  ++ +  TL  ++        LKQG+V+H L IK G   +  +    V+MY+KC
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D V W+ +++        E+ +  F  M       +  ++ S +
Sbjct: 363 GLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLL 422

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+   G L YG+ IHA   K G+E    V+V+N+L++MY + G +    + +  M  +D
Sbjct: 423 SAATNTGNLQYGQSIHACVWKYGFETD--VAVSNALVTMYMKNGCVHDGTKLYESMVDRD 480

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWNA + G    G ++    + + M L     P++ T ++++  C+    +  GR VH
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
            + I+  L  +  +  +L+D Y+K   L  A++ FN ++ + DL +W  +I+        
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS-VRDLFTWTVIITNYAQTNQG 598

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F++M     + +  TL   L  C+S  SLE G+ +H    K G  ++    +AL
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A +L + +    DT  WN +I    QNG   +A+  F+ M   +  SP
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRR-DTIAWNTIICGYAQNGQGNKALTAFRMML-DEGISP 716

Query: 470 DSVTLVNVISACGNLELAFEGK 491
           D VT   ++SAC +  L  EGK
Sbjct: 717 DGVTFTGILSACSHQGLVEEGK 738



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 232/507 (45%), Gaps = 42/507 (8%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +++  CA    L   +++HG  ++ ++  D  +  SL++ Y+K    + A L+  A  P 
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVL-AKMPD 175

Query: 343 NDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSI 390
            D+VSW ++I GL  E     S + F             TL   L +C+   +L+ GK +
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H    KLG   +    +AL+ +Y  CG++  A  +   +   +D + WN+++    Q G 
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT-WNVLLNGYAQRGD 294

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
               +K F SM  + +   +  TL  V+  C N +   +G+ +H L +K     +  +  
Sbjct: 295 VTGVLKLFCSMM-ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---P 567
            L+ MY +C     A  VF++    ++  W+ +I+   Q      +++LF  +      P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNA---- 621
           N+ +I S+LSA T  G L++G+ IH  V+  GF+ +  +S+AL+ MY  + C  +     
Sbjct: 414 NQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLY 473

Query: 622 ---------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                    +W++ +S     G     + +F+ M   G  P   + IS+L +CS    V 
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533

Query: 673 EGLQYYNNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
            G Q + ++++    + +  + VC  ++DM  +   L++A      L ++     W  ++
Sbjct: 534 YGRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFTWTVII 589

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENV 757
              +++  T  G++      +++ E V
Sbjct: 590 ---TNYAQTNQGEKALNYFRQMQQEGV 613



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 15/303 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+   Y E +   F     +D+ TW  +IT   +       L++F +M +EG++
Sbjct: 555 TALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S  + +  L+ G+ +H +  K+G ++D  + +  V+MYAKCG +  +E  
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEAL 674

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DT++WNTI+ G   N    K L  FR M   G   D V+ +  ++A +  G +
Sbjct: 675 FEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
             GK  H   +   +  SP V     ++ +  + G  +  E     M   ++ + W  ++
Sbjct: 735 EEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793

Query: 250 DGFALNGKF---EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
               ++      E+A + L E+Q      P+  +   L+S    ++   EGR      +R
Sbjct: 794 GASKMHNNLVLGEKAANKLFELQ------PEEESSYILLS----NIFATEGRWDDVKRVR 843

Query: 307 RLL 309
            L+
Sbjct: 844 SLM 846


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 218/725 (30%), Positives = 360/725 (49%), Gaps = 50/725 (6%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           RV+H L  K   I   ++ +VF  MY+     +     FS +   +  + + I+  C  +
Sbjct: 82  RVLHILLFK--YIISMTIHSVFRRMYSYVKP-SLQPAIFSNL-SKELPTNSYIIFLCKQH 137

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
           +Y E    +   +  S    +  + +S V A A    L Y K IH   +K  Y+  P + 
Sbjct: 138 HYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQ--PSII 195

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N +I+MY +CG ++ A + F  M   +VVSW ++I G++ NG+  +A  ++  +Q+ R
Sbjct: 196 LQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA--IIMYIQMTR 253

Query: 273 SVE-PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           S + PD  T  ++I  C  +  +  GR +H + I+   G+ L   N+L+  Y+    +  
Sbjct: 254 SGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEH 313

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEML----YLCSQFSFSTLLAIL 375
           A  +F  I P  DL+SW +MI+G            LF+++L    Y  ++F F ++ +  
Sbjct: 314 ASNVFTRI-PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFS-- 370

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C+S   LE+GK +H   +K G   N     +L  MY   G L +A     +I  N D 
Sbjct: 371 -ACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK-NPDI 428

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I A   NG   EAI  F+ M      +PDS+T ++++  CG+     +G+ +H 
Sbjct: 429 VSWNAIIAAFADNGDANEAIDFFRQMIHI-GLTPDSITYISLLCTCGSPVRLNQGRQIHS 487

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNKAEV 554
             +K     +  V N+L+TMY +C  +  A  VF     N NL +WN ++SA  Q K E 
Sbjct: 488 YIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG 547

Query: 555 RALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
               L++ + F   +P+ I+I ++L  C +L  L  G Q+H +    G   +  + + L+
Sbjct: 548 ETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLI 607

Query: 612 DMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C S                 +WSS+I  Y   G G EA+ LF  M N G++P + 
Sbjct: 608 DMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEV 667

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + +  LSACSH GLV+EG + Y +M  E+ + P  EH  CIVD+L R+G L EA  FI+ 
Sbjct: 668 TYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQK 727

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
             +      W  +L+AC  H +  + ++ A  + KL+P N    + L N++ + G W++ 
Sbjct: 728 SGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEV 787

Query: 777 VEIGK 781
            ++ K
Sbjct: 788 AKLRK 792



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 287/588 (48%), Gaps = 20/588 (3%)

Query: 21  SYFESSL-ALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLII 79
           SY + SL    +   +K++ T + +I  C ++        F   +      F+ +T   +
Sbjct: 106 SYVKPSLQPAIFSNLSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSL 165

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           V A      L   + +H   +K+       L N  +NMY KCG +  +   F  M   + 
Sbjct: 166 VLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNV 225

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW +++SG   N      ++ + +M  SG+  D ++  S + A    G++  G+ +HA 
Sbjct: 226 VSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAH 285

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            IK  +    +++  N+LISMY+  G IE A   F  +  KD++SW  +I G+   G   
Sbjct: 286 VIKSWF--GHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRV 343

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA  L  ++    + +P+     ++ S C+  L L  G+ VHG  ++  L  ++    SL
Sbjct: 344 EALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSL 403

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
            D Y+K   L  A++ F  I    D+VSWN++I+              F++M+++     
Sbjct: 404 CDMYAKFGFLPSAKMAFCQIKN-PDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPD 462

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T +++L +C SP  L  G+ IH + +K+GF       N+L+ MY  C  L  A ++ +
Sbjct: 463 SITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFR 522

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            IS N++   WN ++ AC Q     E  + +K M    N  PDS+T+  ++  C  L   
Sbjct: 523 DISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN-KPDSITITTLLGTCAELTSL 581

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G  +H  ++KS + LD  V N LI MY +C  +K A  VF+S  N ++ +W+ +I  +
Sbjct: 582 GVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGY 641

Query: 548 SQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +Q      AL LFR   +L  +PNE++ +  LSAC+ +G++  G +++
Sbjct: 642 AQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLY 689



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 251/526 (47%), Gaps = 22/526 (4%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           +VV+W +MI+   +N      +  + +M   G   D  T   ++ A      +  GR +H
Sbjct: 224 NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLH 283

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
              IK+      +  N  ++MY   G +  +   F+ +   D +SW T+++G +   Y  
Sbjct: 284 AHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRV 343

Query: 157 KCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           + L  FR++   G  Q +     S  +A + L EL YGK +H + +K G   + +     
Sbjct: 344 EALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGC-- 401

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL  MY++ G + +A+ AF  +   D+VSWNAII  FA NG   EA D   +M +   + 
Sbjct: 402 SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM-IHIGLT 460

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T ++L+  C   + L +GR +H Y ++     ++ + NSL+  Y+K + L  A  +
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  I+   +LVSWN+++S             L+KEM +  ++    T+  +L +C    S
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTS 580

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G  +HC+ +K G   +    N L+ MY  CG L  A  +    + N D   W+ +IV
Sbjct: 581 LGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDS-TQNLDIVSWSSLIV 639

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              Q G   EA+  F+ MT      P+ VT +  +SAC ++ L  EG  L+  ++++  G
Sbjct: 640 GYAQCGLGHEALNLFRIMT-NLGVQPNEVTYLGALSACSHIGLVEEGWRLYK-SMETEHG 697

Query: 504 LDTRVQN--ALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISA 546
           +    ++   ++ +  R   +  A T  + S  + ++  W  +++A
Sbjct: 698 IPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAA 743



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 246/503 (48%), Gaps = 28/503 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  HL +  +L++ Y+N    E +  +F     KD+++W  MIT  ++    V  L+ F 
Sbjct: 291 FGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFR 350

Query: 63  EMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGM----IADSSLCNVFVNM 117
           +++ +G    +  +   + SA + +  L+ G+ VH + +K G+     A  SLC    +M
Sbjct: 351 DLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLC----DM 406

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK G L S++  F  +   D VSWN I++    N    + + +FR+M   G   D+++ 
Sbjct: 407 YAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITY 466

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +        L+ G+ IH+  +K+G++    ++V NSL++MY++C  +  A   F  +
Sbjct: 467 ISLLCTCGSPVRLNQGRQIHSYIVKIGFDKE--ITVCNSLLTMYTKCSHLHDALNVFRDI 524

Query: 238 TCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +   ++VSWNAI+       +  E F L  EM    + +PD  T+ TL+  CA+   L  
Sbjct: 525 SRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGN-KPDSITITTLLGTCAELTSLGV 583

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  VH Y+I+  L  D+ + N L+D Y+K  SL  A  +F++   + D+VSW+S+I G  
Sbjct: 584 GNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNL-DIVSWSSLIVGYA 642

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNT 403
                     LF+ M  L  Q +  T L  L +C+    +E G  ++   + + G     
Sbjct: 643 QCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTR 702

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              + ++ +    G L  A + +Q+   ++D + W  ++ AC  + +   A +   ++ +
Sbjct: 703 EHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILK 762

Query: 464 -QQNASPDSVTLVNVISACGNLE 485
              + S   V L N+ ++ GN E
Sbjct: 763 LDPSNSAAMVMLCNIHASAGNWE 785



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 1/193 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETC-NKDVVTWNAMITACVENRCVVMGLHF 60
           GF   +    SLLT Y+  S+   +L +F +   N ++V+WNA+++AC++ +        
Sbjct: 493 GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRL 552

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + EM   G + DS T+  ++    ++  L  G  VHC SIK+G+I D S+CN  ++MYAK
Sbjct: 553 YKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAK 612

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F      D VSW++++ G        + L  FR M   G Q + V+   A
Sbjct: 613 CGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGA 672

Query: 181 VAASACLGELSYG 193
           ++A + +G +  G
Sbjct: 673 LSACSHIGLVEEG 685


>gi|302804428|ref|XP_002983966.1| hypothetical protein SELMODRAFT_119183 [Selaginella moellendorffii]
 gi|300148318|gb|EFJ14978.1| hypothetical protein SELMODRAFT_119183 [Selaginella moellendorffii]
          Length = 876

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 235/826 (28%), Positives = 403/826 (48%), Gaps = 72/826 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  +      L+  Y  +     + A F     K+VV++NAMITA  +N     G   
Sbjct: 62  RGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQN-----GHSR 116

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNC-----LKQGRVVHCLSIKAGM-IADSSLCNVF 114
            G  +   +    + +  IVS ++ +       L++ R +H L  +AG+  ++  +    
Sbjct: 117 QGLGLFRKLLLLDSKMANIVSFISVIKSCCDERLEECRWIHGLVDEAGLSTSNIVVGTAL 176

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP-EKCLLY--FREMGWSGEQ 171
           +NMYA CG +  +E  F  M   + ++W+ +++   H   P   C ++  FR M  SG  
Sbjct: 177 INMYAVCGSVADAEAVFGSMESRNEITWSALIAA--HAAVPGHACQIWDIFRAMENSGVV 234

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S +++     +LS G++IH    K GY     V V NS+++MY +CGD++ A 
Sbjct: 235 PNEVTFISMLSSCTVAEDLSVGRLIHEATDKYGYGSD--VVVGNSVLNMYGKCGDVDRAR 292

Query: 232 RAFWGMTCKDV--VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           + F  M  K    V+WN+++  +     F +A +L   MQL   V  +  T +  ++ CA
Sbjct: 293 QLFDEMGDKHAAPVAWNSLMGAYTQTRNFVQAVELFSLMQL-EGVSANKVTFLAALNACA 351

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
               +  G++V    +   L  D L+  +L+  + K   L  AE +   I  + D VSWN
Sbjct: 352 GLAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWN 410

Query: 350 SMISGLFKEMLY---LCSQFSF----------STLLAILPSCNSPESLEFGKSIHCWQLK 396
           S+++    +  +   +  +F               +A L +C++  +L+ GK +H    +
Sbjct: 411 SIVAAYASQQGHDQDVLREFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRE 470

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAI 455
            G  +  +   AL++MY  CG+L+ A  +   +     D   WN +I A TQ G  +EA+
Sbjct: 471 TGVESTDV-FTALVNMYGKCGELLIAREIFSSVPDEFRDALTWNALINAHTQQGKPEEAL 529

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             ++ M QQ+   P     V+V++A   L  + EG+ +H    + L+ LD+ V   L+ M
Sbjct: 530 SFYRRM-QQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECLLDLDSTVGTLLVNM 588

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISA------------FSQNKAEVRALELFRHL 563
           Y +  D+ +A  +FE   + +  TWN M+ A              Q + E   + LF  +
Sbjct: 589 YAKSGDVDTAWEIFERMQHSDTVTWNSMLGACIQQRQRPSEAPHEQQENEAVVVRLFARM 648

Query: 564 EFEP---NEISIVSILSACTQLGVLRHGKQIHGHV--FHLGFQENSFISSALLDMYSNCK 618
             E    + ++++++LSAC     L HGK++HG V   +L  + ++ + +AL+ MYS C 
Sbjct: 649 LLEGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCG 708

Query: 619 SNA-----------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           S                    W+SMI+A   HG+  +A+EL   M  +G  P K ++  +
Sbjct: 709 SWEVSQAMFHAMGSYHGDLITWNSMITACAQHGQALQAVELVRGMEQAGWSPDKVTLTVI 768

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH+GL+D+  + +  M  EY++ P  +H+  IVD+L R+GKL EA   I+ LP   
Sbjct: 769 LSACSHAGLLDKAYECFQLMRGEYEIDPGPDHYGSIVDLLCRAGKLGEAEALIEKLPDPA 828

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
               W ++L  CS+HGD  +G++ A+ LF ++P +   Y+ LSN Y
Sbjct: 829 SAVTWRSLLGGCSNHGDLVLGRRAADELFGMDPRHHTTYVMLSNTY 874



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 180/720 (25%), Positives = 328/720 (45%), Gaps = 66/720 (9%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           + G   + SL N  +N+Y + G +  +   F G+   + VS+N +++    N +  + L 
Sbjct: 61  RRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQNGHSRQGLG 120

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            FR++     +  N+    +V  S C   L   + IH L  + G   S  V V  +LI+M
Sbjct: 121 LFRKLLLLDSKMANIVSFISVIKSCCDERLEECRWIHGLVDEAGLSTSNIV-VGTALINM 179

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF-ALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           Y+ CG +  AE  F  M  ++ ++W+A+I    A+ G   + +D+   M+    V P+  
Sbjct: 180 YAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVPGHACQIWDIFRAME-NSGVVPNEV 238

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T ++++S C  +  L  GR +H    +   G D+++ NS+++ Y K   + +A  LF+ +
Sbjct: 239 TFISMLSSCTVAEDLSVGRLIHEATDKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDEM 298

Query: 340 APMNDL-VSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEF 386
              +   V+WNS++    +   ++ +   FS            T LA L +C     +  
Sbjct: 299 GDKHAAPVAWNSLMGAYTQTRNFVQAVELFSLMQLEGVSANKVTFLAALNACAGLAEMTA 358

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-C 445
           GK++    ++ G   + +   AL+ ++  CG L  A S+L  I    D+  WN ++ A  
Sbjct: 359 GKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWNSIVAAYA 417

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +Q GH Q+ ++ F  M       P+    V  ++AC NL    +GK +H L  ++  G++
Sbjct: 418 SQQGHDQDVLREFHLM-HSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRET--GVE 474

Query: 506 -TRVQNALITMYGRCRDIKSASTVFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRH 562
            T V  AL+ MYG+C ++  A  +F S  +   +  TWN +I+A +Q      AL  +R 
Sbjct: 475 STDVFTALVNMYGKCGELLIAREIFSSVPDEFRDALTWNALINAHTQQGKPEEALSFYRR 534

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           ++ E   P +   VS+L+A   LG    G++IH  V       +S + + L++MY+    
Sbjct: 535 MQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECLLDLDSTVGTLLVNMYAKSGD 594

Query: 618 -------------KSNAAWSSMISA-YGYHGKGWEA-----------IELFHEMCNSGIR 652
                             W+SM+ A      +  EA           + LF  M   GIR
Sbjct: 595 VDTAWEIFERMQHSDTVTWNSMLGACIQQRQRPSEAPHEQQENEAVVVRLFARMLLEGIR 654

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEA 710
             + +++++LSAC+    +  G + +  ++ E ++  E++  +   +V M  R G  + +
Sbjct: 655 VDRVTLLTMLSACASHASLSHGKKLH-GLVSELNLSLESDTGLFNALVTMYSRCGSWEVS 713

Query: 711 YEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-----PENVGYYISLS 764
                 +         W +M++AC+ HG      Q  EL+  +E     P+ V   + LS
Sbjct: 714 QAMFHAMGSYHGDLITWNSMITACAQHGQA---LQAVELVRGMEQAGWSPDKVTLTVILS 770


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 169/508 (33%), Positives = 281/508 (55%), Gaps = 32/508 (6%)

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           +G  VHGY ++   G    + N+L+ FY+KSN +  A ++F+ + P  D++SWNS+I G 
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEM-PQRDIISWNSIIGGC 60

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      LF  M     +   +TLL+++P+C        G  +H + ++ G  + T
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              NAL+ MY NC D  +   + + +   +  S W  +I + T+ GHF +    F+ M  
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVS-WTAMITSYTRAGHFDKVAGLFQEMGL 179

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    PD   + + + A    E    GKS+HG A+++ +     V NAL+ MY +C  ++
Sbjct: 180 E-GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH--LEFEPNEISIVSILSACTQ 581
            A  +F+     +  +WN +I  +S++     A  LF    L+  PN +++  IL A   
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAAS 298

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L  G+++H +    G+ E++F+++AL+DMY  C               K+  +W+ M
Sbjct: 299 LSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIM 358

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+ YG HG+G +AI LF +M  SGI+P   S  ++L ACSHSGL DEG +++N M  E+ 
Sbjct: 359 IAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHR 418

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P+ +H+ C+VD+L  +G L+EAYEFI+ +PI+P   +W ++L  C  H + K+ ++VA
Sbjct: 419 IEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVA 478

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWK 774
           E++F+LEPEN GYY+ L+N+Y    RW+
Sbjct: 479 EMVFELEPENTGYYVLLANIYAEAERWE 506



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 225/462 (48%), Gaps = 28/462 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A      +L++ Y+  +  E +L +F E   +D+++WN++I  C  N      +  F
Sbjct: 14  GFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELF 73

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG   DSTTLL ++ A  Q +    G VVH  S++ G+I+++SL N  ++MY+ C
Sbjct: 74  VRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNC 133

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D  S+   F  M   + VSW  +++      + +K    F+EMG  G + D  +++SA+
Sbjct: 134 SDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSAL 193

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    L +GK +H   I+ G E+   + V N+L+ MY +CG +E A   F  +T KD
Sbjct: 194 DAFAGNESLKHGKSVHGYAIRNGIEE--VLPVANALMEMYVKCGYMEEARFIFDHVTKKD 251

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +SWN +I G++ +    EAF L +EM L   + P+  T+  ++   A    L  GR +H
Sbjct: 252 TISWNTLIGGYSRSNLANEAFTLFNEMLL--QLRPNAVTMACILPAAASLSSLERGREMH 309

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+RR    D  + N+L+D Y K  +L  A  LF+ +   N L+SW  MI+G       
Sbjct: 310 AYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKN-LISWTIMIAGYGMHGRG 368

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M     Q    +  AIL +C+     + G     W+      N       L
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG-----WRFFNAMRNEHRIEPKL 423

Query: 410 MH------MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            H      +  + G+L  A+  ++ +    D+S W  ++  C
Sbjct: 424 KHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGC 465



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 248/556 (44%), Gaps = 50/556 (8%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
            G VVH   +K G  A  ++CN  ++ YAK   +  +   F  M   D +SWN+I+ GC 
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N   +K +  F  M   G++ D+ +L S + A         G V+H   ++ G      
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISE-- 119

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            S+ N+L+ MYS C D  +  + F  M  K+VVSW A+I  +   G F++   L  EM L
Sbjct: 120 TSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + PD+  + + +   A +  L+ G+SVHGYAIR  +   L + N+LM+ Y K   + 
Sbjct: 180 -EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
           +A  +F+ +    D +SWN++I G            LF EML L  + +  T+  ILP+ 
Sbjct: 239 EARFIFDHVTK-KDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAA 296

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            S  SLE G+ +H + ++ G+  +    NAL+ MY+ CG L+ A  L   ++ N +   W
Sbjct: 297 ASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLT-NKNLISW 355

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
            I+I     +G  ++AI  F+ M +     PD+ +   ++ AC +  L  EG        
Sbjct: 356 TIMIAGYGMHGRGRDAIALFEQM-KGSGIQPDAGSFSAILYACSHSGLRDEG-------- 406

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
                   R  NA+                 E      L  + CM+           A E
Sbjct: 407 -------WRFFNAMRN---------------EHRIEPKLKHYACMVDLLCHTGNLKEAYE 444

Query: 559 LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
               +  EP+    VS+L  C     ++  +++   VF L   EN+     L ++Y+  +
Sbjct: 445 FIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELE-PENTGYYVLLANIYAEAE 503

Query: 619 SNAAWSSMISAYGYHG 634
              A   + +  G  G
Sbjct: 504 RWEAVRKLKNKVGGRG 519


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 208/747 (27%), Positives = 358/747 (47%), Gaps = 92/747 (12%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYA-------------------------------KC 121
           +  H   + AG+ AD+ L N  V +Y+                               + 
Sbjct: 30  KAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRA 89

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL ++      M   + VSWNT+++    +  P + L  ++ M   G    N +L+S +
Sbjct: 90  GDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVL 149

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   +  L  G+  H L +K+G +   +V   N L+ MY++CG +  A R F GM   +
Sbjct: 150 SACGAVAALDDGRRCHGLAVKVGLDGHQFVE--NGLLGMYTKCGSVADAVRLFDGMPSPN 207

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS--------LL 293
            VS+ A++ G A  G  ++A  L   M     +  D   V +++  CA +          
Sbjct: 208 EVSFTAMMGGLAQGGAVDDALRLFARMS-RTGIRVDPVAVSSVLGACAQACAGDYNVARA 266

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           ++  +S+H   +R+  G D  + NSL+D Y+K   + +A  +F +++ ++ +VSWN +I+
Sbjct: 267 IQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVS-IVSWNILIT 325

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           G  +   Y                  + E LEF +       + GF  N +  + ++   
Sbjct: 326 GYGQLGCYE----------------RAMEVLEFMQ-------ESGFEPNEVTYSNMLASC 362

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
           I   D+ +A ++  +I   S T+ WN ++    Q    QE I  F+ M Q QN  PD  T
Sbjct: 363 IKARDVPSARAMFDKIPKPSVTT-WNTLLSGYGQEELHQETIDLFRRM-QHQNVQPDRTT 420

Query: 474 LVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           L  ++S+C   GN EL   GK +H  +++ L+  D  V + LI +Y +C  +  A  +F 
Sbjct: 421 LAVILSSCSRLGNFEL---GKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFN 477

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  WN MIS  + +     A +  + +      P E S  S+++ C +L  +  
Sbjct: 478 MMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQ 537

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYS------------NC---KSNAAWSSMISAYGY 632
           G+Q+H  V   G+ +N ++  +L+DMY+            NC   K+  AW+ MI  Y  
Sbjct: 538 GRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQ 597

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G +A+ELF  M  +  +P   + I++L+ CSHSGLVDE + ++N+M   Y + P  E
Sbjct: 598 NGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVE 657

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C++D L R+ +  E    I  +P +  P +W  +L+AC  H + ++G+  A+ LF+L
Sbjct: 658 HYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRL 717

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
           +P+N   Y+ LSN+Y  LGR  DA  +
Sbjct: 718 DPKNPSPYVLLSNIYATLGRHGDASAV 744



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 259/574 (45%), Gaps = 64/574 (11%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +++ V+WN +I A   +      L  +  M++EG+   + TL  ++SA   +  L  GR 
Sbjct: 104 DRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRR 163

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
            H L++K G+     + N  + MY KCG +  +   F GM   + VS+  +M G      
Sbjct: 164 CHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 223

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVA--ASACLGELSYGKV------IHALGIKLGYE 206
            +  L  F  M  +G + D V++SS +   A AC G+ +  +       IHAL ++ G+ 
Sbjct: 224 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 283

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              +V   NSL+ +Y++   ++ A + F  ++   +VSWN +I G+   G +E A ++L 
Sbjct: 284 SDQHVG--NSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 341

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            MQ     EP+  T   +++ C                                    K+
Sbjct: 342 FMQ-ESGFEPNEVTYSNMLASCI-----------------------------------KA 365

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A  +F+ I P   + +WN+++SG            LF+ M +   Q   +TL  I
Sbjct: 366 RDVPSARAMFDKI-PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVI 424

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L SC+   + E GK +H   ++L   N+    + L+ +Y  CG +  A  +   ++   D
Sbjct: 425 LSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER-D 483

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             CWN +I     +   +EA    K M ++    P   +  ++I+ C  L    +G+ +H
Sbjct: 484 VVCWNSMISGLAIHSLSEEAFDFLKQM-RENGMFPTESSYASMINLCARLSSIPQGRQMH 542

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              LK     +  V  +LI MY +  ++  A   F      NL  WN MI  ++QN    
Sbjct: 543 AQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGE 602

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           +A+ELF ++   + +P+ ++ +++L+ C+  G++
Sbjct: 603 KAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLV 636



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 12/385 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T +++L +        S+ A+F +     V TWN +++   +       +  F
Sbjct: 347 GFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLF 406

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + ++ D TTL +I+S+ +++   + G+ VH  S++  +  D  + +  +++Y+KC
Sbjct: 407 RRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKC 466

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   D V WN+++SG   ++  E+   + ++M  +G      S +S +
Sbjct: 467 GQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMI 526

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A L  +  G+ +HA  +K GY+ + YV    SLI MY++ G+++ A   F  M  K+
Sbjct: 527 NLCARLSSIPQGRQMHAQVLKDGYDQNVYVGC--SLIDMYAKSGNMDDARLFFNCMIVKN 584

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           +V+WN +I G+A NG  E+A +L  E  L    +PD  T + +++ C+ S L+ E  +  
Sbjct: 585 LVAWNEMIHGYAQNGFGEKAVELF-EYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFF 643

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y I  L+ +       L+D  +++   ++ E +   +   +D + W  +++   
Sbjct: 644 NSMESNYGITPLVEH----YTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACV 699

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSP 381
                   +FS   L  + P   SP
Sbjct: 700 VHHNAELGEFSAKHLFRLDPKNPSP 724


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 204/666 (30%), Positives = 334/666 (50%), Gaps = 44/666 (6%)

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           C   +Y E    +      S  Q ++ +  + + A   +  L YGK IH   +K   +  
Sbjct: 132 CKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQ-- 189

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P + + N +++MY +CG ++ A +AF  M  ++VVSW  +I G++ NG+  +A  +  +M
Sbjct: 190 PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQM 249

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L     PD  T  ++I  C  +  +  GR +HG+ I+    + L+  N+L+  Y++   
Sbjct: 250 -LQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQ 308

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG----------------LFKEMLYLCSQFSFSTLL 372
           +  A  +F  I+   DL+SW SMI+G                +F++  Y  ++F F ++ 
Sbjct: 309 IVHASDVFTMIS-TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVF 367

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +   +C S    EFG+ IH    K G   N     +L  MY   G L +A     +I  +
Sbjct: 368 S---ACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI-ES 423

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN +I A + +G   EAI  F  M       PD +T ++++ ACG+     +G  
Sbjct: 424 PDLVSWNAIIAAFSDSGDVNEAIYFFCQM-MHTGLMPDGITFLSLLCACGSPVTINQGTQ 482

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK 551
           +H   +K  +  +  V N+L+TMY +C ++  A  VF+    N NL +WN ++SA  Q+K
Sbjct: 483 IHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHK 542

Query: 552 AEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
                  LF+ + F   +P+ I+I +IL  C +L  L  G Q+H      G   +  +S+
Sbjct: 543 QAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSN 602

Query: 609 ALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            L+DMY+ C S                 +WSS+I  Y   G G EA+ LF  M N G++P
Sbjct: 603 RLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQP 662

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
            + + + +LSACSH GLV+EG  +YN M  E  + P  EH  C+VD+L R+G L EA  F
Sbjct: 663 NEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENF 722

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           IK +   P   +W  +L++C  HG+  + ++ AE + KL+P N    + LSN++ ++G W
Sbjct: 723 IKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNW 782

Query: 774 KDAVEI 779
           K+   +
Sbjct: 783 KEVARL 788



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 184/631 (29%), Positives = 302/631 (47%), Gaps = 39/631 (6%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ +S+T   ++ A T +  LK G+ +H   +K+    D  L N  +NMY KCG L  + 
Sbjct: 153 IQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 212

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + VSW  ++SG   N      ++ + +M  SG   D ++  S + A    G
Sbjct: 213 KAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAG 272

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++  G+ +H   IK GY+   ++   N+LISMY++ G I  A   F  ++ KD++SW ++
Sbjct: 273 DIDLGRQLHGHVIKSGYDH--HLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASM 330

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF   G   EA  L  +M      +P+     ++ S C   L    GR +HG   +  
Sbjct: 331 ITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFG 390

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLC 363
           LG ++    SL D Y+K   L  A   F  I    DLVSWN++I     SG   E +Y  
Sbjct: 391 LGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIES-PDLVSWNAIIAAFSDSGDVNEAIYFF 449

Query: 364 SQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            Q   +       T L++L +C SP ++  G  IH + +K+G        N+L+ MY  C
Sbjct: 450 CQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKC 509

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            +L  AF++ + +S N++   WN ++ AC Q+    E  + FK M   +N  PD++T+  
Sbjct: 510 SNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSEN-KPDNITITT 568

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++  C  L     G  +H  ++KS + +D  V N LI MY +C  +K A  VF S  N +
Sbjct: 569 ILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPD 628

Query: 537 LCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W+ +I  ++Q      AL LFR   +L  +PNE++ + +LSAC+ +G++  G   + 
Sbjct: 629 IVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYN 688

Query: 594 HV-FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            +   LG        S ++D+ +                  G  +EA     +M   G  
Sbjct: 689 TMEIELGIPPTREHVSCMVDLLARA----------------GCLYEAENFIKKM---GFN 729

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           P  +   +LL++C   G VD   +   N+L+
Sbjct: 730 PDITMWKTLLASCKTHGNVDIAERAAENILK 760



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 231/491 (47%), Gaps = 18/491 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L  Y      + +   F     ++VV+W  MI+   +N      +  + +M++ G   D
Sbjct: 198 ILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPD 257

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   I+ A      +  GR +H   IK+G        N  ++MY + G +  +   F+
Sbjct: 258 PLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFT 317

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELS 191
            +   D +SW ++++G     Y  + L  FR+M   G  Q +     S  +A   L E  
Sbjct: 318 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPE 377

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G+ IH +  K G   + +     SL  MY++ G + +A RAF+ +   D+VSWNAII  
Sbjct: 378 FGRQIHGMCAKFGLGRNVFAGC--SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAA 435

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           F+ +G   EA     +M +   + PD  T ++L+  C   + + +G  +H Y I+  L  
Sbjct: 436 FSDSGDVNEAIYFFCQM-MHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDK 494

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  + NSL+  Y+K ++L  A  +F  ++   +LVSWN+++S             LFK M
Sbjct: 495 EAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLM 554

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L+  ++    T+  IL +C    SLE G  +HC+ +K G   +    N L+ MY  CG L
Sbjct: 555 LFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSL 614

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +    + N D   W+ +IV   Q G   EA+  F+ M +     P+ VT + V+S
Sbjct: 615 KHARDVFGS-TQNPDIVSWSSLIVGYAQFGLGHEALNLFR-MMKNLGVQPNEVTYLGVLS 672

Query: 480 ACGNLELAFEG 490
           AC ++ L  EG
Sbjct: 673 ACSHIGLVEEG 683



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 249/572 (43%), Gaps = 82/572 (14%)

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +S N+ I+       + EA D  +      S++ + +T   LI  C     L+ G+ +H 
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           + ++     DL++ N +++ Y K  SL  A   F+ +  + ++VSW  MISG        
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ-LRNVVSWTIMISGYSQNGQEN 240

Query: 355 ----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
               ++ +ML   Y     +F +   I+ +C     ++ G+ +H   +K G+ ++ I  N
Sbjct: 241 DAIIMYIQMLQSGYFPDPLTFGS---IIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQN 297

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G +V A  +   IS   D   W  +I   TQ G+  EA+  F+ M +Q   
Sbjct: 298 ALISMYTRFGQIVHASDVFTMIS-TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFY 356

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+     +V SAC +L     G+ +HG+  K  +G +     +L  MY +   + SA  
Sbjct: 357 QPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIR 416

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGV 584
            F    + +L +WN +I+AFS +     A+  F    H    P+ I+ +S+L AC     
Sbjct: 417 AFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVT 476

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-------------NA---AWSSMIS 628
           +  G QIH ++  +G  + + + ++LL MY+ C +             NA   +W++++S
Sbjct: 477 INQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILS 536

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           A   H +  E   LF  M  S  +P   ++ ++L  C+    ++ G     N +  + V+
Sbjct: 537 ACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVG-----NQVHCFSVK 591

Query: 689 PETEHHVCI----VDMLGRSGKLQEA---------------------------------- 710
                 V +    +DM  + G L+ A                                  
Sbjct: 592 SGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNL 651

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +  +KNL +QP    +  +LSACSH G  + G
Sbjct: 652 FRMMKNLGVQPNEVTYLGVLSACSHIGLVEEG 683



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 241/504 (47%), Gaps = 32/504 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  HL    +L++ Y+       +  +F     KD+++W +MIT   +    +  L+ F
Sbjct: 288 GYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLF 347

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGM----IADSSLCNVF 114
            +M  +G  F      I  S  +    L +   GR +H +  K G+     A  SLC   
Sbjct: 348 RDMFRQG--FYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLC--- 402

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
            +MYAK G L S+   F  +   D VSWN I++    +    + + +F +M  +G   D 
Sbjct: 403 -DMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDG 461

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           ++  S + A      ++ G  IH+  IK+G +     +V NSL++MY++C ++  A   F
Sbjct: 462 ITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKE--AAVCNSLLTMYTKCSNLHDAFNVF 519

Query: 235 WGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
             ++   ++VSWNAI+     + +  E F L  ++ L    +PD  T+ T++  CA+   
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLF-KLMLFSENKPDNITITTILGTCAELAS 578

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G  VH ++++  L  D+ + N L+D Y+K  SL  A  +F +     D+VSW+S+I 
Sbjct: 579 LEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQ-NPDIVSWSSLIV 637

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFS 400
           G            LF+ M  L  Q +  T L +L +C+    +E G   +   +++LG  
Sbjct: 638 GYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIP 697

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
                V+ ++ +    G L  A + ++++  N D + W  ++ +C  +G+   A +  ++
Sbjct: 698 PTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAEN 757

Query: 461 MTQQQNASPDSVTLV-NVISACGN 483
           + +   ++  ++ L+ N+ ++ GN
Sbjct: 758 ILKLDPSNSAALVLLSNIHASVGN 781



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 154/328 (46%), Gaps = 22/328 (6%)

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           H+ + S  + + + C Q  H++EA+ TF    +  +   +S T  N+I AC ++     G
Sbjct: 118 HSRELSTNSYINLMCKQR-HYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYG 176

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H   LKS    D  +QN ++ MYG+C  +K A   F++    N+ +W  MIS +SQN
Sbjct: 177 KKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQN 236

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
             E  A+ ++  +    + P+ ++  SI+ AC   G +  G+Q+HGHV   G+  +    
Sbjct: 237 GQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQ 296

Query: 608 SALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI- 651
           +AL+ MY+               + K   +W+SMI+ +   G   EA+ LF +M   G  
Sbjct: 297 NALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFY 356

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P +    S+ SAC  S L  E  +  + M  ++ +         + DM  + G L  A 
Sbjct: 357 QPNEFIFGSVFSAC-RSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAI 415

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDT 739
                +   P    W A+++A S  GD 
Sbjct: 416 RAFYQIE-SPDLVSWNAIIAAFSDSGDV 442


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 247/829 (29%), Positives = 412/829 (49%), Gaps = 62/829 (7%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF+ +L  S +L+  Y  +    S+  LF E  N+++VTW  +I+   +N         F
Sbjct: 574  GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 633

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQ--MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             +MV  G   +       + A  +   +  K G  +H L  K    +D  +CNV ++MY 
Sbjct: 634  RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 693

Query: 120  KCGD-LNSSECTFSGMHCADTVSWNTIMS-----GCLHNNYPEKCLLYFREMGWSGEQAD 173
             C D  N +   F  +   +++SWN+I+S     G   + Y     +    +G+S +  +
Sbjct: 694  SCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNE 753

Query: 174  NV--SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
                SL +A  +S   G L   + + A   K G+    YV   ++L+S +++ G  + A+
Sbjct: 754  YTFGSLITAACSSVDFG-LCVLEQMLARVEKSGFLQDLYVG--SALVSGFARFGLTDDAK 810

Query: 232  RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
              F  M  ++VVS N ++ G     + E A  + HEM+ +  +  D + VV L +    S
Sbjct: 811  NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD-SYVVLLSAFSEFS 869

Query: 292  LL---LREGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            +L    R+GR VH + IR  L  + + + N L++ Y+KS +++ A  +F  +    D VS
Sbjct: 870  VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE-KDSVS 928

Query: 348  WNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
            WNS+ISGL            F  M    S  S  TL++ L SC S   +  G+ IHC  L
Sbjct: 929  WNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL 988

Query: 396  KLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQN-GHF 451
            KLG   +    NAL+ +Y   G   + +  FSL+       D   WN VI A + +    
Sbjct: 989  KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY----DQVSWNSVIGALSDSEASV 1044

Query: 452  QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
             +A+K F  M  +       VT +N++SA  +L L      +H L LK  +  DT + NA
Sbjct: 1045 SQAVKYFLEM-MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 1103

Query: 512  LITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI 570
            L++ YG+C ++     +F       +  +WN MIS +  N+   +A++L   +  +   +
Sbjct: 1104 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 1163

Query: 571  ---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
               +  ++LSAC  +  L  G ++H        + +  + SAL+DMYS C          
Sbjct: 1164 DSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFF 1223

Query: 618  -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK-SSVISLLSACSHSGLV 671
                 ++  +W+SMIS Y  HG G +A++LF  M   G  P   + ++ +LSACSH G V
Sbjct: 1224 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFV 1283

Query: 672  DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
            +EG +++ +M E Y + P  EH  C+VD+LGR+GKL E  +FI ++P++P   +W  +L 
Sbjct: 1284 EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLG 1343

Query: 732  AC--SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            AC  ++  +T++G++ AE+L +LEP+N   Y+ L+NMY +  +W+D  +
Sbjct: 1344 ACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 1392



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 186/720 (25%), Positives = 329/720 (45%), Gaps = 64/720 (8%)

Query: 88   CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            C ++ R +H  SIK G + +  L N  +N+Y + GDL S++  F  M   + V+W  ++S
Sbjct: 559  CSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLIS 618

Query: 148  GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGY 205
            G   N  P++    FR+M  +G   ++ +  SA+ A    G      G  IH L  K  Y
Sbjct: 619  GYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRY 678

Query: 206  EDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
                 V V N LISMY  C D    A   F  +  ++ +SWN+II  ++  G    A+DL
Sbjct: 679  GSD--VVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDL 736

Query: 265  LHEMQ---LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL--LGY--DLLMMN 317
               MQ   L  S +P+  T  +LI+    S+    G  V    + R+   G+  DL + +
Sbjct: 737  FSSMQKEGLGFSFKPNEYTFGSLITAACSSVDF--GLCVLEQMLARVEKSGFLQDLYVGS 794

Query: 318  SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC-- 363
            +L+  +++      A+ +F  +   N +VS N ++ GL            F EM  L   
Sbjct: 795  ALVSGFARFGLTDDAKNIFEQMGVRN-VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGI 853

Query: 364  SQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVA 421
            +  S+  LL+     +   E    G+ +H   ++ G ++N + + N L++MY   G +  
Sbjct: 854  NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 913

Query: 422  AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
            A S+ + +    D+  WN +I    QN   ++A ++F  M ++  + P + TL++ +S+C
Sbjct: 914  ACSVFELMVEK-DSVSWNSLISGLDQNECSEDAAESFLRM-RRTGSMPSNFTLISTLSSC 971

Query: 482  GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             +L     G+ +H   LK  +  D  V NAL+ +Y           VF      +  +WN
Sbjct: 972  ASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWN 1031

Query: 542  CMISAFSQNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             +I A S ++A V +A++ F  +    +  + ++ ++ILSA + L +     QIH  V  
Sbjct: 1032 SVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 1091

Query: 598  LGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIE 641
                +++ I +ALL  Y  C                +   +W+SMIS Y ++    +A++
Sbjct: 1092 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 1151

Query: 642  LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI---- 697
            L   M   G R    +  ++LSAC+    ++ G++     +    +R   E  V +    
Sbjct: 1152 LVWFMMQKGQRLDSFTFATVLSACASVATLERGME-----VHACGIRACMESDVVVGSAL 1206

Query: 698  VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG-DTKMGKQVAELLFKLEPEN 756
            VDM  + G++  A  F + +P++     W +M+S  + HG   K  K    ++   +P +
Sbjct: 1207 VDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 1265



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 202/447 (45%), Gaps = 46/447 (10%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T  +LI+    S    E R +H  +I+     +L + N+L++ Y +   L  A+ LF+ +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 340 APMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESL 384
           +  N LV+W  +ISG             F++M+   ++ + ++F + L      + P   
Sbjct: 606 SNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGC 663

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIV 443
           + G  IH    K  + ++ +  N L+ MY +C D    A S+  RI   +  S WN +I 
Sbjct: 664 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSIS-WNSIIS 722

Query: 444 ACTQNGHFQEAIKTFKSMTQQQ---NASPDSVTLVNVIS-ACGNLELAF-EGKSLHGLAL 498
             ++ G    A   F SM ++    +  P+  T  ++I+ AC +++      + +     
Sbjct: 723 VYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVE 782

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           KS    D  V +AL++ + R      A  +FE     N+ + N ++    + K    A +
Sbjct: 783 KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAK 842

Query: 559 LFRHLE--FEPNEISIVSILSACTQLGVL----RHGKQIHGHVFHLGFQENSF-ISSALL 611
           +F  ++     N  S V +LSA ++  VL    R G+++H HV   G  +N   I + L+
Sbjct: 843 VFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLV 902

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           +MY+                 K + +W+S+IS    +    +A E F  M  +G  P+  
Sbjct: 903 NMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++IS LS+C+  G +  G Q + + L+
Sbjct: 963 TLISTLSSCASLGWIMLGEQIHCDGLK 989


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 223/727 (30%), Positives = 364/727 (50%), Gaps = 47/727 (6%)

Query: 93  RVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFS--GMHCADTVSWNTIMSGC 149
           R  H  S+ +G +  S  L    +  YA   D+ S+                WN++    
Sbjct: 31  RRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRAL 90

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLGYE 206
                P + L  +  M  SG + D+ +   A+ A+A + +  +   G  +HA  ++ G  
Sbjct: 91  ASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLL 150

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            +  V   N+L++ Y+ CG    A R F  M  +DVVSWN+++     NG  E+A   + 
Sbjct: 151 LAD-VFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAV- 208

Query: 267 EMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            + +MRS  P ++A++V+++  C        G  VHG  ++  L   + + N+L+D Y K
Sbjct: 209 -VGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGK 267

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------EMLYLCSQFSFS----TLL 372
              L  +  +FN +   N+ VSWNS I G F          EM  L S+   +    TL 
Sbjct: 268 FGDLESSMHVFNGMQEKNE-VSWNSAI-GCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLS 325

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++LP+         GK +H + ++    ++    N LM MY   G    A ++ + I   
Sbjct: 326 SLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVR 385

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           +  S WN +I   TQNG   EA +    M Q+    P+S TLVN++ AC  +     GK 
Sbjct: 386 NVVS-WNAMIANLTQNGAEAEAFRLVIEM-QKNGECPNSFTLVNLLPACSRVASVKMGKQ 443

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H  +++  +  D  V NALI +Y +C  +  A  +F+      + ++N +I  +SQ++ 
Sbjct: 444 IHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGV-SYNTLIVGYSQSQC 502

Query: 553 EVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              +L LF+ +     E + +S +  LSAC+ L   + GK+IHG +       + F++++
Sbjct: 503 CFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANS 562

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           LLD+Y+                 K  A+W++MI  YG HG+   A ELF  M + GI   
Sbjct: 563 LLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYD 622

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             S I++LS CSH GLVD G +Y++ M+ + +++P+  H+ C+VD+LGR+G+L E+ E I
Sbjct: 623 HVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEII 681

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +N+P +    VWGA+L +C  HGD ++ +  AE LF+L+PEN GYY  L NMY   G W 
Sbjct: 682 RNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWN 741

Query: 775 DAVEIGK 781
           +A  + K
Sbjct: 742 EANGVKK 748



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 197/745 (26%), Positives = 337/745 (45%), Gaps = 56/745 (7%)

Query: 5   AHLPTSTSLLTAYSNVSYFESS-LALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFG 62
           A  P + +LL +Y+ +    S+ L L +     +    WN++  A          L  + 
Sbjct: 45  ASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYN 104

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLK---QGRVVHCLSIKAG-MIADSSLCNVFVNMY 118
            MV  G+R D  T    + A   +   +   +G  +H  +++ G ++AD    N  V  Y
Sbjct: 105 RMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFY 164

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           A CG    +   F  M   D VSWN+++S  L N   E        M  SG   +  SL 
Sbjct: 165 AVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLV 224

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A     +  +G  +H L +K G   +  V++ N+L+ MY + GD+E++   F GM 
Sbjct: 225 SILPACGTERDEGFGLCVHGLVLKFGL--NSVVNLGNALVDMYGKFGDLESSMHVFNGMQ 282

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K+ VSWN+ I  FA  G  E+  ++   M     V P   T+ +L+    D      G+
Sbjct: 283 EKNEVSWNSAIGCFAHAGFHEDVLEMFRLMS-EHDVTPGSVTLSSLLPALVDLGYFHLGK 341

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
            +HGY+IRR +  D+ + N+LMD Y+K     KA  +F  I   N +VSWN+MI+ L + 
Sbjct: 342 ELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRN-VVSWNAMIANLTQN 400

Query: 358 ----EMLYLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
               E   L  +         SF TL+ +LP+C+   S++ GK IH W ++    ++   
Sbjct: 401 GAEAEAFRLVIEMQKNGECPNSF-TLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFV 459

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NAL+ +Y  CG L  A  +  R     D   +N +IV  +Q+    E++  F+ M +  
Sbjct: 460 SNALIDVYAKCGQLNLARYIFDR--SEKDGVSYNTLIVGYSQSQCCFESLHLFQQM-RLA 516

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
               D+V+ +  +SAC NL    +GK +HG+ +K L+     + N+L+ +Y +   + +A
Sbjct: 517 GIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTA 576

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
           S +F      ++ +WN MI  +  +     A ELF  ++    E + +S +++LS C+  
Sbjct: 577 SKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHG 636

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  GK+    +     +           M+  C        M+   G  G+  E+ E+
Sbjct: 637 GLVDRGKKYFSQMIAQNIKPQ--------QMHYAC--------MVDLLGRAGQLSESAEI 680

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDML 701
              M     R       +LL +C   G ++       ++ E   ++PE   ++  + +M 
Sbjct: 681 IRNMP---FRANSDVWGALLGSCRIHGDIELARLAAEHLFE---LKPENSGYYTLLRNMY 734

Query: 702 GRSGKLQEA---YEFIKNLPIQPKP 723
             SG   EA    + +K+  +Q  P
Sbjct: 735 SESGMWNEANGVKKLMKSRKVQKNP 759



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 170/629 (27%), Positives = 283/629 (44%), Gaps = 54/629 (8%)

Query: 1   RGFL-AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           RG L A +    +L+T Y+       +  +F E   +DVV+WN++++A + N  +     
Sbjct: 147 RGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKR 206

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
               M+  G+  +  +L+ I+ A         G  VH L +K G+ +  +L N  V+MY 
Sbjct: 207 AVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYG 266

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K GDL SS   F+GM   + VSWN+ +    H  + E  L  FR M        +V+LSS
Sbjct: 267 KFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSS 326

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   LG    GK +H   I+   E   +++  N+L+ MY++ G  E A   F  +  
Sbjct: 327 LLPALVDLGYFHLGKELHGYSIRRAVESDIFIA--NTLMDMYAKFGCSEKASAIFENIEV 384

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGR 298
           ++VVSWNA+I     NG   EAF L+ EMQ  ++ E P+  T+V L+  C+    ++ G+
Sbjct: 385 RNVVSWNAMIANLTQNGAEAEAFRLVIEMQ--KNGECPNSFTLVNLLPACSRVASVKMGK 442

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H ++IRR L  DL + N+L+D Y+K   L+ A  +F+      D VS+N++I G    
Sbjct: 443 QIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFD--RSEKDGVSYNTLIVGYSQS 500

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF++M     +    + +  L +C++  + + GK IH   +K    ++    
Sbjct: 501 QCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLA 560

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N+L+ +Y   G L  A  +  RI+   D + WN +I+    +G    A + F  M +   
Sbjct: 561 NSLLDVYTKGGMLDTASKIFNRITQK-DVASWNTMILGYGMHGQIDVAFELFDLM-KDDG 618

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              D V+ + V+S C +  L   GK                               K  S
Sbjct: 619 IEYDHVSYIAVLSVCSHGGLVDRGK-------------------------------KYFS 647

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            +           + CM+    +      + E+ R++ F  N     ++L +C   G + 
Sbjct: 648 QMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIE 707

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYS 615
             +    H+F L   ENS   + L +MYS
Sbjct: 708 LARLAAEHLFELK-PENSGYYTLLRNMYS 735


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 194/634 (30%), Positives = 330/634 (52%), Gaps = 44/634 (6%)

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A + L  L +GK IH   +K   +  P +++ N +++MY +C  ++ A++ F  M  +
Sbjct: 70  ISACSYLRSLEHGKKIHDHMLK--SKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPER 127

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW ++I G++ NG+   A +   +M L   V PD  T  ++I  C+    +  GR +
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQM-LQSGVMPDQFTFGSIIKACSSLGDIGLGRQL 186

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H + ++   G  ++  N+L+  Y+KSN +  A  +F+ +A   DL+SW SMI+G      
Sbjct: 187 HAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMA-TRDLISWGSMIAGFSQLGY 245

Query: 356 -------FKEML----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                  FKEML    YL ++F F +   +  +C+S    E+G+ +H   +K G   +  
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIFGS---VFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +L  MY  CG L  A  +  +I    D   WN +I      G  +EAI  F  M + 
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWNAIIAGFAYGGDAKEAIAFFSQM-RH 360

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           Q   PD +T+ +++ AC +    ++G  +HG   K  + LD  V N L+TMY +C +++ 
Sbjct: 361 QGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRD 420

Query: 525 ASTVFESCY-NCNLCTWNCMISA-FSQNKAE--VRALELFRHLEFEPNEISIVSILSACT 580
           A   FE    N +L +WN +++A    ++AE   R L+L    +  P+ I++ ++L A  
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA 480

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSS 625
           +   +  G Q+H +    G   ++ +++ L+D+Y+ C S                 +WSS
Sbjct: 481 ETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSS 540

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +I  Y   G G EA++LF  M    ++P   + + +L+ACSH GLV+EG + Y  M +E+
Sbjct: 541 LILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEF 600

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  EH  C+VD+L R+G L EA  FI  +   P   VW  +L+AC  HG+  +GK+ 
Sbjct: 601 GIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRA 660

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           AE + K++P N   ++ L N+Y + G W+D   +
Sbjct: 661 AENILKIDPSNSAAHVLLCNIYASKGNWEDVARL 694



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 189/670 (28%), Positives = 318/670 (47%), Gaps = 44/670 (6%)

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
           +T   ++SA + +  L+ G+ +H   +K+    D +L N  +NMY KC  L  ++  F  
Sbjct: 64  STYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDA 123

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           M   + VSW ++++G   N      L ++ +M  SG   D  +  S + A + LG++  G
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + +HA  +K   E   ++   N+LISMY++   I  A   F  M  +D++SW ++I GF+
Sbjct: 184 RQLHAHVLK--SEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFS 241

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G   EA     EM       P+     ++ S C+  L    GR +HG +I+  LG D+
Sbjct: 242 QLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDV 301

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSF 368
               SL D Y+K   LS A ++F  I    DLV+WN++I+G       KE +   SQ   
Sbjct: 302 FAGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH 360

Query: 369 STLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             L+       ++L +C SP  L  G  +H +  K+G   +    N L+ MY  C +L  
Sbjct: 361 QGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRD 420

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A    + +  N+D   WN ++ AC ++   +E  +  K M   Q+  PD +TL NV+ A 
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQH-RPDYITLTNVLGAS 479

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                   G  +H  ALK+ +  DT V N LI +Y +C  +K+A  +F+S  N ++ +W+
Sbjct: 480 AETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWS 539

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +I  ++Q      AL+LF   R L+ +PN ++ V +L+AC+ +G++  G +++G +   
Sbjct: 540 SLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTM--- 596

Query: 599 GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
              E  F    +     +C      S M+      G   EA    H+M      P     
Sbjct: 597 ---EKEF---GIAPTREHC------SCMVDLLARAGCLNEAEGFIHQM---AFDPDIVVW 641

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYE---FI 714
            +LL+AC   G VD G +   N+L+   + P  +  HV + ++    G  ++       +
Sbjct: 642 KTLLAACKTHGNVDVGKRAAENILK---IDPSNSAAHVLLCNIYASKGNWEDVARLRSLM 698

Query: 715 KNLPIQPKPG 724
           K   ++  PG
Sbjct: 699 KQRGVRKVPG 708



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 273/597 (45%), Gaps = 48/597 (8%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L     +L  Y      + +  +F     ++VV+W ++I    +N      L F+ +M++
Sbjct: 98  LTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+  D  T   I+ A + +  +  GR +H   +K+   A     N  ++MY K   +  
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIID 217

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASA 185
           +   FS M   D +SW ++++G     Y  + L YF+EM   G    N     S  +A +
Sbjct: 218 ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L +  YG+ +H + IK G     +     SL  MY++CG +  A   F+ +   D+V+W
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGC--SLCDMYAKCGLLSCARVVFYQIGRPDLVAW 335

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII GFA  G  +EA     +M+  + + PD  TV +L+  C     L +G  VHGY  
Sbjct: 336 NAIIAGFAYGGDAKEAIAFFSQMR-HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYIN 394

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------LF 356
           +  L  D+ + N+L+  Y+K + L  A   F  +    DLVSWN++++          +F
Sbjct: 395 KMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVF 454

Query: 357 KEMLYLC---SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           + +  +C    +  + TL  +L +     S+E G  +HC+ LK G + +T   N L+ +Y
Sbjct: 455 RLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLY 514

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A  +   +  N D   W+ +I+   Q G+ +EA+K FK+M ++ +  P+ VT
Sbjct: 515 AKCGSLKTAHKIFDSMI-NPDVVSWSSLILGYAQFGYGEEALKLFKTM-RRLDVKPNHVT 572

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            V V++AC ++ L  EG  L+G   K      TR                      E C 
Sbjct: 573 FVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTR----------------------EHC- 609

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
                  +CM+   ++      A      + F+P+ +   ++L+AC   G +  GK+
Sbjct: 610 -------SCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKR 659



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 254/552 (46%), Gaps = 43/552 (7%)

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           S N  I        F EA      +Q        ++T   LIS C+    L  G+ +H +
Sbjct: 29  SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDH 88

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            ++     DL + N +++ Y K  SL  A+ +F+A+ P  ++VSW S+I+G         
Sbjct: 89  MLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM-PERNVVSWTSVIAGYSQNGQGGN 147

Query: 355 ---LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
               + +ML    +  QF+F +   I+ +C+S   +  G+ +H   LK  F  + I  NA
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGS---IIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNA 204

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY     ++ A  +  R++   D   W  +I   +Q G+  EA+  FK M  Q    
Sbjct: 205 LISMYTKSNLIIDALDVFSRMA-TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL 263

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+     +V SAC +L     G+ LHG+++K  +G D     +L  MY +C  +  A  V
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVV 323

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVL 585
           F      +L  WN +I+ F+       A+  F   RH    P+EI++ S+L ACT    L
Sbjct: 324 FYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSEL 383

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------KSNA---AWSSMISA 629
             G Q+HG++  +G   +  + + LL MY+ C             + NA   +W+++++A
Sbjct: 384 YQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTA 443

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
              H +  E   L   MC S  RP   ++ ++L A + +  ++ G Q +   L+   +  
Sbjct: 444 CMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT-GLNC 502

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
           +T     ++D+  + G L+ A++   ++ I P    W +++   +  G  +   ++ + +
Sbjct: 503 DTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSLILGYAQFGYGEEALKLFKTM 561

Query: 750 FKLE--PENVGY 759
            +L+  P +V +
Sbjct: 562 RRLDVKPNHVTF 573



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 251/513 (48%), Gaps = 32/513 (6%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F AH+    +L++ Y+  +    +L +F     +D+++W +MI    +    +  L +F 
Sbjct: 195 FGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFK 254

Query: 63  EMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGM----IADSSLCNVFVNM 117
           EM+ +G+   +  +   + SA + +   + GR +H +SIK G+     A  SLC    +M
Sbjct: 255 EMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC----DM 310

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKCG L+ +   F  +   D V+WN I++G  +    ++ + +F +M   G   D +++
Sbjct: 311 YAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITV 370

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            S + A     EL  G  +H    K+G + D P   V N+L++MY++C ++  A   F  
Sbjct: 371 RSLLCACTSPSELYQGMQVHGYINKMGLDLDVP---VCNTLLTMYAKCSELRDAIFFFEE 427

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M C  D+VSWNAI+     + + EE F LL  M + +   PD  T+  ++   A+++ + 
Sbjct: 428 MRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQH-RPDYITLTNVLGASAETVSIE 486

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA-IAPMNDLVSWNSMISG 354
            G  VH YA++  L  D  + N L+D Y+K  SL  A  +F++ I P  D+VSW+S+I G
Sbjct: 487 IGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINP--DVVSWSSLILG 544

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSN 401
                       LFK M  L  + +  T + +L +C+    +E G  ++   + + G + 
Sbjct: 545 YAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAP 604

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                + ++ +    G L  A   + +++ + D   W  ++ AC  +G+     +  +++
Sbjct: 605 TREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENI 664

Query: 462 TQ-QQNASPDSVTLVNVISACGNLELAFEGKSL 493
            +   + S   V L N+ ++ GN E     +SL
Sbjct: 665 LKIDPSNSAAHVLLCNIYASKGNWEDVARLRSL 697


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 221/747 (29%), Positives = 362/747 (48%), Gaps = 54/747 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +S + L+   A TQ   L  G  +H   +K+G++   +  N  ++ Y+KC    S+   F
Sbjct: 5   ESISPLLTRYAATQ--SLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVF 60

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                   VSW+++++   +N  P + L  FR M   G + +  +L   +    C  +  
Sbjct: 61  DETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK---CAPDAG 117

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIID 250
            G  +HA+ +  G     +V+  N+L++MY   G ++ A R F      ++ VSWN ++ 
Sbjct: 118 LGVQVHAVAVSTGLSGDIFVA--NALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            F  N +  +A +L  EM +   V P+      +++ C  S  L  GR VH   +R    
Sbjct: 176 AFVKNDRCSDAVELFGEM-VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYD 234

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST 370
            D+   N+L+D YSK   +  A L+F  + P  D+VSWN+ ISG    +L+   Q +   
Sbjct: 235 KDVFTANALVDMYSKLGDIHMAALVFGKV-PKTDVVSWNAFISGC---VLHGHDQHALEL 290

Query: 371 LLAILPSCNSPESLEFG-----------------KSIHCWQLKL-GFSNNTIGVNALMHM 412
           LL +  S   P                       + IH + +K    S++ IGV AL+ M
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGV-ALVDM 349

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G L  A  + + I    D   WN +I  C+  G   E++  F  M +++ +  +  
Sbjct: 350 YAKYGLLDDARKVFEWIP-RKDLLLWNALISGCSHGGCHGESLSLFCRM-RKEGSDINRT 407

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL  V+ +  +LE   +   +H LA K     D+ V N LI  Y +C  ++ A+ VFE  
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
            + N+  +  MI+A SQ      A++LF  +     EP+   + S+L+AC  L     GK
Sbjct: 468 SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           Q+H H+    F  + F  +AL+  Y+ C               K   +WS+MI     HG
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G  A+++F  M +  I P   ++ S+L AC+H+GLVDE   Y+++M E + +    EH+
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHY 647

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C++D+LGR+GKL +A E + ++P +    VWGA+L+A   H D ++GK  AE LF LEP
Sbjct: 648 SCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEP 707

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
           E  G ++ L+N Y + G W +  ++ K
Sbjct: 708 EKSGTHVLLANTYASAGMWDEVAKVRK 734



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 188/653 (28%), Positives = 310/653 (47%), Gaps = 44/653 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL+ YS      S+  +F ET +   V+W++++TA   N      L  F  M   G+R +
Sbjct: 43  LLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCN 102

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L I++           G  VH +++  G+  D  + N  V MY   G ++ +   F 
Sbjct: 103 EFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFD 159

Query: 133 -GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                 + VSWN +MS  + N+     +  F EM WSG + +    S  V A     +L 
Sbjct: 160 EAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLE 219

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA+ ++ GY+   + +  N+L+ MYS+ GDI  A   F  +   DVVSWNA I G
Sbjct: 220 AGRKVHAMVVRTGYDKDVFTA--NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLREGRSVHGYAIRRLL 309
             L+G  + A +LL +M+    + P++ T+ +++     A +     GR +HG+ I+   
Sbjct: 278 CVLHGHDQHALELLLQMK-SSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA 336

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  +  +L+D Y+K   L  A  +F  I P  DL+ WN++ISG            LF 
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWI-PRKDLLLWNALISGCSHGGCHGESLSLFC 395

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M    S  + +TL A+L S  S E++     +H    K+GF +++  VN L+  Y  C 
Sbjct: 396 RMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCN 455

Query: 418 DLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            L  A  + +   H+SD    +  +I A +Q  H ++AIK F  M  ++   PD   L +
Sbjct: 456 CLRYANKVFE--EHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML-RKGLEPDPFVLSS 512

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +++AC +L    +GK +H   +K     D    NAL+  Y +C  I+ A   F    +  
Sbjct: 513 LLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKG 572

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W+ MI   +Q+    RAL++FR +  E   PN I++ S+L AC   G++   K    
Sbjct: 573 VVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK---- 628

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
                G+       S++ +M+   ++   +S MI   G  GK  +A+EL + M
Sbjct: 629 -----GY------FSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 670



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 267/566 (47%), Gaps = 31/566 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETC-NKDVVTWNAMITACVENRCVVMGLHF 60
           G    +  + +L+  Y    + + +  +F E   +++ V+WN M++A V+N      +  
Sbjct: 130 GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVEL 189

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEMV  G+R +      +V+A T    L+ GR VH + ++ G   D    N  V+MY+K
Sbjct: 190 FGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSK 249

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD++ +   F  +   D VSWN  +SGC+ + + +  L    +M  SG   +  +LSS 
Sbjct: 250 LGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSI 309

Query: 181 V--AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +   A A  G  + G+ IH   IK   +   Y+ V  +L+ MY++ G ++ A + F  + 
Sbjct: 310 LKACAGAGAGAFALGRQIHGFMIKACADSDDYIGV--ALVDMYAKYGLLDDARKVFEWIP 367

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++ WNA+I G +  G   E+  L   M+   S + +  T+  ++   A    + +  
Sbjct: 368 RKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGS-DINRTTLAAVLKSTASLEAISDTT 426

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH  A +     D  ++N L+D Y K N L  A  +F   +  N ++++ SMI+     
Sbjct: 427 QVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDN-IIAFTSMITALSQC 485

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF EML    +     L ++L +C S  + E GK +H   +K  F  +    
Sbjct: 486 DHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG 545

Query: 407 NALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           NAL++ Y  CG   D   AFS L     +     W+ +I    Q+GH + A+  F+ M  
Sbjct: 546 NALVYTYAKCGSIEDADLAFSGLP----DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVD 601

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRD 521
           ++ A P+ +TL +V+ AC +  L  E K     ++K + G+D   ++   +I + GR   
Sbjct: 602 ERIA-PNHITLTSVLCACNHAGLVDEAKGYFS-SMKEMFGIDRTEEHYSCMIDLLGRAGK 659

Query: 522 IKSASTVFESC-YNCNLCTWNCMISA 546
           +  A  +  S  +  N   W  +++A
Sbjct: 660 LDDAMELVNSMPFEANAAVWGALLAA 685


>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 226/737 (30%), Positives = 360/737 (48%), Gaps = 88/737 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVN-----MYAKCGDLNSSECTFSGM-HCADTVSW 142
           L  G  +H   IK G    S   N FV      +YAKC     +   F  +    +  S+
Sbjct: 119 LSLGLQIHAHLIKKG---SSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSY 175

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
             I+     N   ++ LL + EM   G   DN  + + + A   L  + +G+ IH   +K
Sbjct: 176 AAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVK 235

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK---DVVSWNAIIDGFALNGKFE 259
           +G E    V V  SL+ MY +CG +E AE+ F  M  +   DVV WN++I G+  NG   
Sbjct: 236 MGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVV-WNSMIVGYVQNGMNV 294

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL--LMMN 317
           EA  L  +M+    VEP   ++    S CA+   + EG+   G+A+  L+G++L  ++ +
Sbjct: 295 EAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGK--QGHALVILMGFELNYVLGS 352

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS-------- 364
           S+M+FYSK   + + EL+F ++A + D V+WN MIS     G+F++ L +C         
Sbjct: 353 SIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENL 412

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +F   TL ++L        ++ GK +H + ++  F ++   ++ ++ MY  CG +  A  
Sbjct: 413 RFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARG 472

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +        D   WN ++ AC + G   EA+K F  M Q ++  P      NV+S     
Sbjct: 473 VFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQM-QMESVPP------NVVS----- 520

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE----SCYNCNLCTW 540
                                    N+LI  + R   +  A  +F     S    NL TW
Sbjct: 521 ------------------------WNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITW 556

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             MIS  +QN     A  +F+ ++     PN ISI S LSACT + +L +G+ IHG+V  
Sbjct: 557 TTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMR 616

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
                +  I+++++DMY+ C               K    +++MISAY  HGK  EA+ L
Sbjct: 617 NFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALAL 676

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F E+   GI P   +  S+LSACSH  L+ EGL+ +  M+ E  ++P  +H+ C+V +L 
Sbjct: 677 FQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLT 736

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
             G+L EA   I  +P  P   + G++L+AC  + +T++   +A+ L K+EP N G Y++
Sbjct: 737 NDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVA 796

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN+Y ALG+W +   I
Sbjct: 797 LSNVYAALGKWDEVSNI 813



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 289/609 (47%), Gaps = 63/609 (10%)

Query: 15  TAYSNVSYFESSLALFYETCN---------------KDVVTWNAMITACVENRCVVMGLH 59
           ++YS   + ES L + Y  CN               +++ ++ A++     N      L 
Sbjct: 134 SSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALL 193

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS--SLCNVFVNM 117
            + EM+E+G   D+  +   + A   +  +  GR +H   +K G   D    +    V+M
Sbjct: 194 SYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDM 253

Query: 118 YAKCGDLNSSECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADN 174
           Y KCG L  +E  F  M     + V WN+++ G + N    + +  F +M + G  +   
Sbjct: 254 YGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSE 313

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           VSLS   +A A L  +  GK  HAL I +G+E + YV + +S+++ YS+ G IE  E  F
Sbjct: 314 VSLSGFFSACANLEAVEEGKQGHALVILMGFELN-YV-LGSSIMNFYSKVGLIEEVELVF 371

Query: 235 WGMTC-KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
             M   KD V+WN +I  +   G FE+A ++ H M+   ++  D  T+ +L++L AD+  
Sbjct: 372 RSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRD 431

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           ++ G+ +HG+ IR     D+ +++ ++D Y+K   +  A  +F+      D+V WN+M++
Sbjct: 432 VKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLA 491

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                GL  E L L  Q    ++                              N +  N+
Sbjct: 492 ACAEKGLSGEALKLFFQMQMESV----------------------------PPNVVSWNS 523

Query: 409 LMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L+  +   G +V A   FS +Q      +   W  +I    QNG   EA + F+ M Q  
Sbjct: 524 LIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQM-QGA 582

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P+S+++ + +SAC N+ L   G+S+HG  +++ M    ++  ++I MY +C ++  A
Sbjct: 583 GMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDA 642

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
             VF  C    L  +N MISA++ +     AL LF+ L  +   P+ I+  S+LSAC+  
Sbjct: 643 KFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHG 702

Query: 583 GVLRHGKQI 591
            +L+ G ++
Sbjct: 703 RLLKEGLEL 711



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 242/564 (42%), Gaps = 45/564 (7%)

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--D 312
           N K +EA   L ++     + PDI     L+  C  +  L  G  +H + I++   Y  +
Sbjct: 82  NLKLQEAISTLSQLPQHTPIGPDIYG--ELLQGCVYARDLSLGLQIHAHLIKKGSSYSTN 139

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF- 366
             + + L+  Y+K N    A   F  +    +L S+ +++     +GL+KE L    +  
Sbjct: 140 EFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMM 199

Query: 367 --SFSTLLAILP----SCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGD 418
              F     ++P    +C     + FG+ IH + +K+G  F        +L+ MY  CG 
Sbjct: 200 EKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGV 259

Query: 419 LVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           L  A  +   + +   +   WN +IV   QNG   EA+  F+ M  +    P  V+L   
Sbjct: 260 LEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGF 319

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-N 536
            SAC NLE   EGK  H L +     L+  + ++++  Y +   I+    VF S     +
Sbjct: 320 FSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKD 379

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNE----ISIVSILSACTQLGVLRHGKQIH 592
             TWN MIS++ Q     +ALE+   +  E N     +++ S+L+       ++ GK++H
Sbjct: 380 EVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLH 439

Query: 593 GHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKG 636
           G      F  +  + S +LDMY+ C                K    W++M++A    G  
Sbjct: 440 GFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLS 499

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            EA++LF +M    + P   S  SL+     +G V E    ++ M +   V P       
Sbjct: 500 GEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QLSGVTPNLITWTT 558

Query: 697 IVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK-L 752
           ++  L ++G   EA   ++ ++   ++P      + LSAC++      G+ +   + +  
Sbjct: 559 MISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNF 618

Query: 753 EPENVGYYISLSNMYVALGRWKDA 776
              ++    S+ +MY   G   DA
Sbjct: 619 MSFSLQITTSIIDMYAKCGNLDDA 642



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 1   RGFLAH-LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           R F++  L  +TS++  Y+     + +  +F     K++  +NAMI+A   +      L 
Sbjct: 616 RNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALA 675

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG 92
            F E+V++GI  D  T   ++SA +    LK+G
Sbjct: 676 LFQELVKQGIMPDHITFTSVLSACSHGRLLKEG 708


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 208/689 (30%), Positives = 360/689 (52%), Gaps = 46/689 (6%)

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           S E  F  M      +WN ++   + N  P   L  +R M   G   D  S    + A  
Sbjct: 114 SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACG 173

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVS 244
            L ++  G  +H + +KLG+  + ++   N+L+SMY++   + AA+R F     K D V 
Sbjct: 174 KLRDIRSGTELHCMLVKLGFNSTGFI--VNALVSMYAKTDHLSAAKRLFDASQEKGDAVL 231

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN+I+  ++ +GK  E   L  EMQ M     +  T+V+ ++ C      + G+ +H   
Sbjct: 232 WNSILSSYSTSGKSLETLQLFREMQ-MTGPASNSYTIVSALTACEGFSYAKLGKEIHAAV 290

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKA----ELLFNAIAPMNDLVSWNSMISG-----L 355
           ++    +++ + N+L+  Y++   + +A     L+ NA     D+V+WNS+I G     +
Sbjct: 291 LKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNA-----DVVTWNSLIKGYVQNLM 345

Query: 356 FKEML-YLCSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
           +KE L + C   +        +L +++ +     +L  G  +H + +K G+ +N +  N 
Sbjct: 346 YKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNT 405

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  C +L         + H  D   W  +I     N    EA++ F+ + +++   
Sbjct: 406 LIDMYSKC-NLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKR-ME 463

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D + L +++ AC  L+     K +H   L+  + +DT +QN L+ +YG+CR++  AS V
Sbjct: 464 IDEMMLGSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRV 522

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           FES    ++ +W  MIS+ + N  E  A+ELFR +       + ++++ ILSA   L  L
Sbjct: 523 FESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSAL 582

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           + G++IHG++   GF     I+ A++DMY+ C               K    ++SMI+AY
Sbjct: 583 KKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 642

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G HG G  ++ELF++M +  + P   S ++LL ACSH+GL+DEG ++   M  EY + P 
Sbjct: 643 GMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPW 702

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+VC+VDMLGR+  + EA+EF+K +  +P   VW A+L+AC  H + ++G+  A+ L 
Sbjct: 703 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLL 762

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +LEP+N G  + +SN++   GRW D  ++
Sbjct: 763 ELEPKNPGNLVLVSNVFAEQGRWNDVEKV 791



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 290/585 (49%), Gaps = 29/585 (4%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S   +F E  ++    WNA+I A V N      L  +  M  EG+  D  +  +++ A  
Sbjct: 114 SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACG 173

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF-SGMHCADTVSWN 143
           ++  ++ G  +HC+ +K G  +   + N  V+MYAK   L++++  F +     D V WN
Sbjct: 174 KLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWN 233

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           +I+S    +    + L  FREM  +G  +++ ++ SA+ A         GK IHA  +K 
Sbjct: 234 SILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKS 293

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
            +    Y  V N+LI+MY++CG +  A R    M   DVV+WN++I G+  N  ++EA  
Sbjct: 294 THSFEVY--VCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQ 351

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
              +M +    +PD  ++ ++I+       L  G  +H Y I+     +LL+ N+L+D Y
Sbjct: 352 FFCDM-IAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMY 410

Query: 324 SKSN---SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
           SK N    + +A L+ +      DL+SW ++I+G            LF+++     +   
Sbjct: 411 SKCNLTCYMGRAFLMMHE----KDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDE 466

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
             L +IL +C+  +S+   K IHC  L+ G  +  I  N L+ +Y  C ++  A  + + 
Sbjct: 467 MMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQ-NELVDVYGKCRNMGYASRVFES 525

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           I    D   W  +I +   NG+  EA++ F+ M  +     DSV L+ ++SA  +L    
Sbjct: 526 IK-GKDVVSWTSMISSSALNGNENEAVELFRRMA-ETGLLADSVALLCILSAAASLSALK 583

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +G+ +HG  L+    L+  +  A++ MY  C D++SA  VF+      L  +  MI+A+ 
Sbjct: 584 KGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 643

Query: 549 QNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
            +     ++ELF   RH    P+ IS +++L AC+  G+L  G++
Sbjct: 644 MHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRR 688



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 167/582 (28%), Positives = 288/582 (49%), Gaps = 41/582 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +L++ Y+   +  ++  LF  +  K D V WN+++++   +   +  L  F EM   G  
Sbjct: 202 ALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPA 261

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T++  ++A    +  K G+ +H   +K+    +  +CN  + MYA+CG +  +   
Sbjct: 262 SNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRI 321

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
              M+ AD V+WN+++ G + N   ++ L +F +M  +G + D VSL+S +AAS  L  L
Sbjct: 322 LRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNL 381

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G  +HA  IK G++ +  + V N+LI MYS+C       RAF  M  KD++SW  II 
Sbjct: 382 LAGMELHAYVIKHGWDSN--LLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA 439

Query: 251 GFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           G+ALN    EA  L  ++  + M   E  + +++   S+    L+++E   +H + +R+ 
Sbjct: 440 GYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKE---IHCHILRKG 496

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D ++ N L+D Y K  ++  A  +F +I    D+VSW SMIS             LF
Sbjct: 497 L-IDTVIQNELVDVYGKCRNMGYASRVFESIKG-KDVVSWTSMISSSALNGNENEAVELF 554

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS-NNTIGVNALMHMYIN 415
           + M           LL IL +  S  +L+ G+ IH + L+ GF    +I V A++ MY  
Sbjct: 555 RRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAV-AVVDMYAC 613

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGDL +A ++  RI        +  +I A   +G  + +++ F  M + +N SPD ++ +
Sbjct: 614 CGDLQSAKAVFDRIERKGLLQ-YTSMINAYGMHGCGKASVELFNKM-RHENVSPDHISFL 671

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN------ALITMYGRCRDIKSASTVF 529
            ++ AC +  L  EG+      LK +M L+ +++        L+ M GR   +  A   F
Sbjct: 672 ALLYACSHAGLLDEGRRF----LK-IMELEYKLEPWPEHYVCLVDMLGRANCVVEAFE-F 725

Query: 530 ESCYNCNLCT--WNCMISA-FSQNKAEVRALELFRHLEFEPN 568
                    T  W  +++A  S ++ E+  +   R LE EP 
Sbjct: 726 VKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 767


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 228/801 (28%), Positives = 378/801 (47%), Gaps = 69/801 (8%)

Query: 10   STSLLTAYSNVSYFESSLALFYET--CNKDVVTWNAMITACVENRCVVM-GLHFFGEMVE 66
            + +L+T Y+      S+  LF  T   N+D+VTWNA+++A   +      G H F  +  
Sbjct: 694  TNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRR 753

Query: 67   EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              +     TL  +               +H  ++K G+  D  +    VN+YAK G +  
Sbjct: 754  SVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIRE 813

Query: 127  SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
            +   F GM   D V WN +M   +      + +L F E   +G + D+V+L +      C
Sbjct: 814  ARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKC 873

Query: 187  LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
               +   K   A   KL                MY   G               DV+ WN
Sbjct: 874  KKNILELKQFKAYATKL---------------FMYDDDG--------------SDVIVWN 904

Query: 247  AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
              +  F   G+  EA D   +M   R V  D  T V ++++ A    L  G+ +HG  +R
Sbjct: 905  KALSRFLQRGEAWEAVDCFVDMINSR-VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMR 963

Query: 307  RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
              L   + + N L++ Y K+ S+S+A  +F  +  + DL+SWN+MISG     L  CS  
Sbjct: 964  SGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEV-DLISWNTMISGCTLSGLEECSVG 1022

Query: 367  SFSTLL------------AILPSCNSPESLEF-GKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F  LL            ++L +C+S E   +    IH   +K G   ++    AL+ +Y
Sbjct: 1023 MFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVY 1082

Query: 414  INCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
               G +  A  L   ++ +  D + WN ++     +G F +A++ +  M Q+     D +
Sbjct: 1083 SKRGKMEEAEFLF--VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILM-QESGERSDQI 1139

Query: 473  TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            TLVN   A G L    +GK +H + +K    LD  V + ++ MY +C +++SA  VF   
Sbjct: 1140 TLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 533  YNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGK 589
             + +   W  MIS   +N  E  AL  +  +     +P+E +  +++ AC+ L  L  G+
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGR 1259

Query: 590  QIHGHVFHLGFQENSFISSALLDMYSNC-----------KSN----AAWSSMISAYGYHG 634
            QIH ++  L    + F+ ++L+DMY+ C           ++N    A+W++MI     HG
Sbjct: 1260 QIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHG 1319

Query: 635  KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
               EA++ F  M + G+ P + + I +LSACSHSGLV E  + + +M + Y + PE EH+
Sbjct: 1320 NAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHY 1379

Query: 695  VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
             C+VD L R+G+++EA + I ++P +    ++  +L+AC    D + GK+VAE L  LEP
Sbjct: 1380 SCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEP 1439

Query: 755  ENVGYYISLSNMYVALGRWKD 775
             +   Y+ LSN+Y A  +W++
Sbjct: 1440 SDSAAYVLLSNVYAAANQWEN 1460



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 173/687 (25%), Positives = 311/687 (45%), Gaps = 63/687 (9%)

Query: 89   LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA--DTVSWNTIM 146
            L  G+  H   + +G   D  + N  + MYAKCG L+S+   F        D V+WN I+
Sbjct: 672  LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731

Query: 147  SG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
            S    H +        FR +  S       +L+            S  + +H   +K+G 
Sbjct: 732  SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791

Query: 206  EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            +   +V+   +L+++Y++ G I  A   F GM  +DVV WN ++  +       EA  L 
Sbjct: 792  QWDVFVA--GALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLF 849

Query: 266  HEMQLMRSVEPDIATVVTL--ISLCADSLLLREGRSVHGYAIRRLL----GYDLLMMNSL 319
             E        PD  T+ TL  +  C  ++L  E +    YA +  +    G D+++ N  
Sbjct: 850  SEFHRT-GFRPDDVTLRTLSRVVKCKKNIL--ELKQFKAYATKLFMYDDDGSDVIVWNKA 906

Query: 320  MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCN 379
            +     S  L + E  + A+    D++  NS ++         C   +F  +L ++   N
Sbjct: 907  L-----SRFLQRGE-AWEAVDCFVDMI--NSRVA---------CDGLTFVVMLTVVAGLN 949

Query: 380  SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
                LE GK IH   ++ G        N L++MY+  G +  A S+  +++   D   WN
Sbjct: 950  ---CLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNE-VDLISWN 1005

Query: 440  IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLAL 498
             +I  CT +G  + ++  F  +  + +  PD  T+ +V+ AC +LE  +     +H  A+
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLL-RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAM 1064

Query: 499  KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
            K+ + LD+ V  ALI +Y +   ++ A  +F +    +L +WN ++  +  +    +AL 
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALR 1124

Query: 559  LFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            L+  ++      ++I++V+   A   L  L+ GKQIH  V   GF  + F++S +LDMY 
Sbjct: 1125 LYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYL 1184

Query: 616  NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
             C                 + AW++MIS    +G+   A+  +H+M  S ++P + +  +
Sbjct: 1185 KCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFAT 1244

Query: 661  LLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            L+ ACS    +++G Q + N+++    +D    T     +VDM  + G +++A    K  
Sbjct: 1245 LVKACSLLTALEQGRQIHANIVKLNCAFDPFVMT----SLVDMYAKCGNIEDARGLFKRT 1300

Query: 718  PIQPKPGVWGAMLSACSHHGDTKMGKQ 744
              + +   W AM+   + HG+ K   Q
Sbjct: 1301 NTR-RIASWNAMIVGLAQHGNAKEALQ 1326



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 3/238 (1%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            RGF   L  ++ +L  Y      ES+  +F E  + D V W  MI+ CVEN      L  
Sbjct: 1167 RGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFT 1226

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            + +M    ++ D  T   +V A + +  L+QGR +H   +K     D  +    V+MYAK
Sbjct: 1227 YHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            CG++  +   F   +     SWN ++ G   +   ++ L +F+ M   G   D V+    
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGV 1346

Query: 181  VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            ++A +  G +S   +  +++    G E  P +   + L+   S+ G IE AE+    M
Sbjct: 1347 LSACSHSGLVSEAYENFYSMQKNYGIE--PEIEHYSCLVDALSRAGRIEEAEKVISSM 1402



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 156/382 (40%), Gaps = 32/382 (8%)

Query: 367  SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
            S     +IL    +   L  GK  H   L  G   +    N L+ MY  CG L +A  L 
Sbjct: 655  SLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLF 714

Query: 427  QRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFK--SMTQQQNASPDSVTLVNVISACGN 483
                  N D   WN ++ A     H  ++   F    + ++   S    TL  V   C  
Sbjct: 715  DTTPDTNRDLVTWNAILSALA--AHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772

Query: 484  LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
                   +SLHG A+K  +  D  V  AL+ +Y +   I+ A  +F+     ++  WN M
Sbjct: 773  SASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVM 832

Query: 544  ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
            + A+     E  A+ LF       F P+++++ ++        V++  K I      L  
Sbjct: 833  MKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSR------VVKCKKNI------LEL 880

Query: 601  QENSFISSALLDMYSNCKSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            ++    ++ L  MY +  S+   W+  +S +   G+ WEA++ F +M NS +     + +
Sbjct: 881  KQFKAYATKLF-MYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFV 939

Query: 660  SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYEFIK 715
             +L+  +    ++ G Q +  ++     R   +  V    C+++M  ++G +  A     
Sbjct: 940  VMLTVVAGLNCLELGKQIHGIVM-----RSGLDQVVSVGNCLINMYVKAGSVSRARSVFG 994

Query: 716  NLPIQPKPGVWGAMLSACSHHG 737
             +  +     W  M+S C+  G
Sbjct: 995  QMN-EVDLISWNTMISGCTLSG 1015



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 30/288 (10%)

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---ASPDSVTLVNVISAC 481
           L +R  H SD      +I+A   +   + A  T   +T + +   + P   +++    A 
Sbjct: 611 LREREGHKSDNPSPTAMIMAL-MHLRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAA 669

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN--LCT 539
            +L L   GK  H   L S    D  V N LITMY +C  + SA  +F++  + N  L T
Sbjct: 670 SDLSL---GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVT 726

Query: 540 WNCMISAFSQNKAEVR-ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           WN ++SA + +  +      LFR L          ++  +   C         + +HG+ 
Sbjct: 727 WNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYA 786

Query: 596 FHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAI 640
             +G Q + F++ AL+++Y+                 +    W+ M+ AY      +EA+
Sbjct: 787 VKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAM 846

Query: 641 ELFHEMCNSGIRPTKSSV--ISLLSACSHSGLVDEGLQYYNNMLEEYD 686
            LF E   +G RP   ++  +S +  C  + L  +  + Y   L  YD
Sbjct: 847 LLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYD 894


>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 208/707 (29%), Positives = 358/707 (50%), Gaps = 43/707 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y  V    S + +F +  ++ ++TWN +++  V N+     L  F +MVEE +  +
Sbjct: 128 LIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPN 187

Query: 73  STTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
             T+  ++ A    N        +H   I  G+   S  CN  +++YAK G + S+   F
Sbjct: 188 EVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVF 247

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D+VSW  ++S    N + E+ +  F EM  SG        SS ++A A +    
Sbjct: 248 DELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFD 307

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HAL  K G+    YV   N+L+++YS+ G+  +A++ F  + CKD VS+N++I G
Sbjct: 308 IGEQLHALVFKCGFFLETYV--CNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISG 365

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            +  G  + A +L  +MQL   ++PD  TV +L+S CA    L +G  +H YAI+  +  
Sbjct: 366 LSQQGCSDRALELFKKMQL-DHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCL 424

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+++  SL+D Y K + ++ A   F A     ++V WN M+              +F++M
Sbjct: 425 DIIIEGSLLDLYVKCSDITTAHKFF-ATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQM 483

Query: 360 L---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                + +QF++ +   IL +C S  +L+ G+ IH   +K GF  N    + L+ MY   
Sbjct: 484 QIEGLIPNQFTYPS---ILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKL 540

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  +L+R++   D   W  +I   TQ+  F EA+  F  M  +     D++   +
Sbjct: 541 GKLDIARGILRRLNEE-DVVSWTALIAGYTQHDLFTEALNLFDEMLNR-GIQSDNIGFSS 598

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            ISAC  ++   +G+ +H  +  S    D  + NAL+++Y RC  I+ A+  FE     +
Sbjct: 599 AISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKD 658

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
             +WN ++S F+Q+     AL++F  +     + +  +  S +SA   +  ++ GKQIH 
Sbjct: 659 SISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHA 718

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +   GF     +S+AL+ +Y+ C               K+  +W++MI+ Y  HG G E
Sbjct: 719 MIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIE 778

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           A+ LF +M   G +P   + + ++SACSH GLV+EGL Y+ +M +E+
Sbjct: 779 AVNLFQKMKQVGAKPNHVTFVGVISACSHVGLVNEGLAYFESMSKEH 825



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 179/720 (24%), Positives = 325/720 (45%), Gaps = 41/720 (5%)

Query: 50  ENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS 109
           EN     G+ F   + E G R  S T L ++            + +H   +K G   +S 
Sbjct: 64  ENEESARGIDFLHVVDERGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESV 123

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           LC+  +  Y   GDLNS    F  M     ++WN ++SG + N    + L  F +M    
Sbjct: 124 LCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEEN 183

Query: 170 EQADNVSLSSAVAASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
              + V+++S + A    G ++  Y + IHA  I  G   S      N LI +Y++ G I
Sbjct: 184 VNPNEVTVASVLRAYGS-GNVAFYYVEQIHASIISRGLGTSSI--ACNPLIDLYAKNGFI 240

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
            +A + F  +  KD VSW A+I  ++ NG  EEA  L  EM +   + P      +++S 
Sbjct: 241 RSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHI-SGLSPTPYVFSSVLSA 299

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA   L   G  +H    +     +  + N+L+  YS+  +   A+ +F+ I    D VS
Sbjct: 300 CAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKI-KCKDEVS 358

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           +NS+ISG            LFK+M     +    T+ ++L +C S +SL  G+ +H + +
Sbjct: 359 YNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAI 418

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K G   + I   +L+ +Y+ C D+  A       +   +   WN+++VA  Q  +  ++ 
Sbjct: 419 KAGMCLDIIIEGSLLDLYVKCSDITTAHKFFA-TTQTENVVLWNVMLVAYGQLDNLSKSF 477

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F+ M Q +   P+  T  +++  C +      G+ +H  A+K+    +  V + LI M
Sbjct: 478 CIFRQM-QIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDM 536

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISI 572
           Y +   +  A  +       ++ +W  +I+ ++Q+     AL LF  +     + + I  
Sbjct: 537 YAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGF 596

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            S +SAC  +  L  G+QIH   +  G+ E+  I +AL+ +Y+ C               
Sbjct: 597 SSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDA 656

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K + +W++++S +   G   EA+++F +M  + I+ +  +  S +SA ++   + +G Q 
Sbjct: 657 KDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQI 716

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +  M+ +     E E    ++ +  + G +  A      +P +     W AM++  S HG
Sbjct: 717 H-AMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIP-EKNEISWNAMITGYSQHG 774



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 244/501 (48%), Gaps = 18/501 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L+T YS +  F S+  +F +   KD V++N++I+   +  C    L  F
Sbjct: 320 GFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELF 379

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  + ++ D  T+  ++SA   +  L +G  +H  +IKAGM  D  +    +++Y KC
Sbjct: 380 KKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKC 439

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+ ++   F+     + V WN ++      +   K    FR+M   G   +  +  S +
Sbjct: 440 SDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSIL 499

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                 G L  G+ IH+  IK G+E + Y  V + LI MY++ G ++ A      +  +D
Sbjct: 500 RTCTSFGALDLGEQIHSQAIKTGFEFNVY--VCSVLIDMYAKLGKLDIARGILRRLNEED 557

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW A+I G+  +  F EA +L  EM L R ++ D     + IS CA    L +G+ +H
Sbjct: 558 VVSWTALIAGYTQHDLFTEALNLFDEM-LNRGIQSDNIGFSSAISACAGIQALSQGQQIH 616

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
             +       DL + N+L+  Y++   + +A L F  I    D +SWN+++SG  +    
Sbjct: 617 AQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKI-DAKDSISWNALMSGFAQSGYC 675

Query: 358 -EMLYLCSQFSFSTLLAILPSCNSPES-------LEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L + +Q + + + A L +  S  S       ++ GK IH   +K GF +     NAL
Sbjct: 676 EEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNAL 735

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  CG +  A      I   ++ S WN +I   +Q+G   EA+  F+ M +Q  A P
Sbjct: 736 ITLYAKCGCIDGAKREFFEIPEKNEIS-WNAMITGYSQHGCGIEAVNLFQKM-KQVGAKP 793

Query: 470 DSVTLVNVISACGNLELAFEG 490
           + VT V VISAC ++ L  EG
Sbjct: 794 NHVTFVGVISACSHVGLVNEG 814


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 214/697 (30%), Positives = 356/697 (51%), Gaps = 44/697 (6%)

Query: 118 YAKCGDLNSSECTF--SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           YA   DL SS        +       WN++       + P + LL +  M  SG   D+ 
Sbjct: 16  YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75

Query: 176 SLSSAVAASACLGELSYGK--VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +   A+ A+A   +    K   +HA  ++ G+    +    N+L++ Y+ CG    A R 
Sbjct: 76  TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAG--NTLVAFYAACGHAGDARRV 133

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSL 292
           F  M  +DVVSWN+++  F  N  F++A   L  + +MRS  P ++A++V+++  C    
Sbjct: 134 FDEMPARDVVSWNSLVSSFLANKMFDDARQAL--LSMMRSGVPVNVASLVSVVPACGVEQ 191

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               G  VHG  ++  L   + + N+L+D Y K   +  +  +F  +   N+ VSWNS I
Sbjct: 192 EGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNE-VSWNSAI 250

Query: 353 -----SGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                +GL+ ++L L    S         TL ++LP+       + G+ +H + +K    
Sbjct: 251 GCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAME 310

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +    N+L+ MY   G L  A ++ ++I   +  S WN +I    QNG   EA      
Sbjct: 311 LDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVS-WNAMIANLVQNGAESEAFGLVIK 369

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M Q+    P+S+TLVN++ AC  +     GK +H  ++++ +  D  + NALI MY +C 
Sbjct: 370 M-QKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCG 428

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
            ++ A ++F+     ++ ++N +I  +SQ+     +L LF+ L     E + IS +  L+
Sbjct: 429 QLRLAQSIFDLSEKDDV-SYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALT 487

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           ACT L   + GK+IHG +       + F+++ LL +Y+                 K  A+
Sbjct: 488 ACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVAS 547

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI  YG HG+   A  LF  M + G+     S I++LS CSH GLV+ G +Y+++ML
Sbjct: 548 WNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHML 607

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
            + ++ P+  H+ C+VD+LGRSG+L E+ E I ++P      VWGA+L AC  HG+ ++ 
Sbjct: 608 AQ-NLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELA 666

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +  A+ LF+L+PE+ GYY  L NMY   GRW +A +I
Sbjct: 667 QYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKI 703



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 194/724 (26%), Positives = 332/724 (45%), Gaps = 57/724 (7%)

Query: 25  SSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           S L LF+     +    WN++  A          L  +  M+  G+  D  T    + A 
Sbjct: 25  SRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAA 84

Query: 84  TQMNCLK--QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
                    +G  +H  ++++G +AD    N  V  YA CG    +   F  M   D VS
Sbjct: 85  AAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVS 144

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           WN+++S  L N   +        M  SG   +  SL S V A     E  +G  +H L +
Sbjct: 145 WNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVL 204

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           K G +    V++ N+L+ MY + G +EA+ + F GM  ++ VSWN+ I  F   G + + 
Sbjct: 205 KTGLDS--IVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDV 262

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
             L   M   R   P   T+ +L+    +      GR VHGY+I+R +  D+ + NSL+D
Sbjct: 263 LALFRGMS-ERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVD 321

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFS------- 369
            Y+K  SL KA  +F  I   N +VSWN+MI+ L +     E   L  +           
Sbjct: 322 MYAKFGSLEKACAVFEKIEVRN-VVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSI 380

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           TL+ +LP+C+   SL+ GK IH W ++ G   +    NAL+ MY  CG L  A S+   +
Sbjct: 381 TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-L 439

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           S   D S +N +I+  +Q+    E++  FK ++       D+++ +  ++AC NL    +
Sbjct: 440 SEKDDVS-YNTLILGYSQSPWSFESLNLFKQLS-SVGIEYDAISFMGALTACTNLSSFKQ 497

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF-- 547
           GK +HG+ ++ L+     + N L+ +Y +   + +AS +F      ++ +WN MI  +  
Sbjct: 498 GKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGM 557

Query: 548 -SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
             Q  A     +L +      + +S +++LS C+  G++  GK+   H+     +     
Sbjct: 558 HGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQ-- 615

Query: 607 SSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM---CNSGIRPTKSSVISLLS 663
                 M+  C        M+   G  G+  E++E+  +M    NS +        +LL 
Sbjct: 616 ------MHYAC--------MVDLLGRSGQLTESVEIILDMPFHANSDVWG------ALLG 655

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYE---FIKNLPI 719
           AC   G + E  QY  + L  ++++PE + ++  + +M   +G+  EA++    +K+  +
Sbjct: 656 ACRIHGNI-ELAQYAADHL--FELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKV 712

Query: 720 QPKP 723
           Q  P
Sbjct: 713 QKNP 716



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 262/559 (46%), Gaps = 22/559 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G LA +    +L+  Y+   +   +  +F E   +DVV+WN+++++ + N+         
Sbjct: 106 GHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQAL 165

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G+  +  +L+ +V A         G  VH L +K G+ +  +L N  V+MY K 
Sbjct: 166 LSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKF 225

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + +S   F GM   + VSWN+ +   L+       L  FR M   G    +++LSS +
Sbjct: 226 GHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLL 285

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG    G+ +H   IK   E   +V+  NSL+ MY++ G +E A   F  +  ++
Sbjct: 286 PALVELGYFDLGREVHGYSIKRAMELDIFVA--NSLVDMYAKFGSLEKACAVFEKIEVRN 343

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSV 300
           VVSWNA+I     NG   EAF L+ +MQ  +  E P+  T+V L+  C+    L+ G+ +
Sbjct: 344 VVSWNAMIANLVQNGAESEAFGLVIKMQ--KDGECPNSITLVNLLPACSRMASLKTGKQI 401

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H ++IR  L +DL + N+L+D Y+K   L  A+ +F+      D VS+N++I G      
Sbjct: 402 HAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD--LSEKDDVSYNTLILGYSQSPW 459

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LFK++  +  ++   + +  L +C +  S + GK IH   ++   SN+    N 
Sbjct: 460 SFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANT 519

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y   G L  A  +  RI    D + WN +I+    +G    A   F  M +    +
Sbjct: 520 LLGLYTKGGMLDTASKIFNRIKEK-DVASWNNMIMGYGMHGQIDAAFHLFDLM-KDHGVT 577

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI-KSAST 527
            D V+ + V+S C +  L   GK      L   +         ++ + GR   + +S   
Sbjct: 578 YDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEI 637

Query: 528 VFESCYNCNLCTWNCMISA 546
           + +  ++ N   W  ++ A
Sbjct: 638 ILDMPFHANSDVWGALLGA 656



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 212/456 (46%), Gaps = 17/456 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            +L+  Y    + E+S+ +F     ++ V+WN+ I   +        L  F  M E G  
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             S TL  ++ AL ++     GR VH  SIK  M  D  + N  V+MYAK G L  +   
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSWN +++  + N    +      +M   GE  ++++L + + A + +  L
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASL 395

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IHA  I+ G     ++S  N+LI MY++CG +  A+  F  ++ KD VS+N +I 
Sbjct: 396 KTGKQIHAWSIRTGLMFDLFIS--NALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLIL 452

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G++ +    E+ +L  ++  +  +E D  + +  ++ C +    ++G+ +HG  +RRLL 
Sbjct: 453 GYSQSPWSFESLNLFKQLSSV-GIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLS 511

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               + N+L+  Y+K   L  A  +FN I    D+ SWN+MI G            LF  
Sbjct: 512 NHPFLANTLLGLYTKGGMLDTASKIFNRIKE-KDVASWNNMIMGYGMHGQIDAAFHLFDL 570

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M      +   + +A+L  C+    +E GK      L        +    ++ +    G 
Sbjct: 571 MKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQ 630

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           L  +  ++  +  ++++  W  ++ AC  +G+ + A
Sbjct: 631 LTESVEIILDMPFHANSDVWGALLGACRIHGNIELA 666


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 206/673 (30%), Positives = 339/673 (50%), Gaps = 66/673 (9%)

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
           SG   DN +  + + A A + EL  GK IHA   K GY     V++ N+L++MY +CG +
Sbjct: 4   SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
             A + F  +T +D VSWN+II       ++E A      M LM   EP   T+V++   
Sbjct: 64  GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLM-LMEGFEPSSFTLVSMALA 122

Query: 288 CA-----DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           C+     D L L  G+ +HG   R+   +     N+LM  Y+K   L  A+ L   +   
Sbjct: 123 CSNLRKRDGLWL--GKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLL-VLFED 178

Query: 343 NDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSI 390
            DLV+WNSMIS       F E L                T  ++LP+C+  + L  GK I
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEI 238

Query: 391 HCWQLKLG--FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           H + L+      N+ +G +AL+ MY NCG + +   +   +  +     WN +I    Q+
Sbjct: 239 HAYALRTDDVIENSFVG-SALVDMYCNCGQVESGRLVFDSVL-DRKIGLWNAMIAGYAQS 296

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
            H ++A+  F  M        ++ T+ +++ A    E     + +HG  +K  +  +  +
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYL 356

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-------- 560
           QNALI MY R  DIK++  +F+S  + ++ +WN +I+++        AL L         
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEE 416

Query: 561 -----------RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
                      + + F+PN I+++++L  C  L  L  GK+IH +           + SA
Sbjct: 417 KSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSA 476

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG---- 650
           L+DMY+ C               ++   W+ +I AYG HGKG E++ELF +M   G    
Sbjct: 477 LVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGG 536

Query: 651 -IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            ++PT+ + I+L ++CSHSG+VDEGL  ++ M  E+ + P  +H+ CIVD++GR+GK++E
Sbjct: 537 EVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEE 596

Query: 710 AYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           AY  +  +P    K G W ++L AC  + + ++G+  AE L +L+P+   +Y+ LSN+Y 
Sbjct: 597 AYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYS 656

Query: 769 ALGRWKDAVEIGK 781
           + G W  A+ + +
Sbjct: 657 SAGLWDKAMNLRR 669



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 250/511 (48%), Gaps = 40/511 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           ++ +L+  Y+ +   + + +L     ++D+VTWN+MI++  +N   +  L F   MV EG
Sbjct: 152 SNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEG 211

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSS 127
           ++ D  T   ++ A + ++ L+ G+ +H  +++   +I +S + +  V+MY  CG + S 
Sbjct: 212 VKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESG 271

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASAC 186
              F  +       WN +++G   + + EK L+ F EM   +G  ++  ++SS V A   
Sbjct: 272 RLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVR 331

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              +S  + IH   IK G E + Y+   N+LI MYS+ GDI+ ++R F  M  +D+VSWN
Sbjct: 332 CEGISRKEGIHGYVIKRGLETNRYLQ--NALIDMYSRMGDIKTSKRIFDSMEDRDIVSWN 389

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRS---------------VEPDIATVVTLISLCADS 291
            II  + + G+  +A  LLHEMQ +                  +P+  T++T++  CA  
Sbjct: 390 TIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASL 449

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L +G+ +H YAIR LL   + + ++L+D Y+K   L+ A  +F+ + P+ ++++WN +
Sbjct: 450 SALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM-PIRNVITWNVI 508

Query: 352 I-----SGLFKEMLYLCSQF------------SFSTLLAILPSCNSPESLEFGKSI-HCW 393
           I      G  KE L L                +  T +A+  SC+    ++ G S+ H  
Sbjct: 509 IMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKM 568

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD-TSCWNIVIVACTQNGHFQ 452
           + + G          ++ +    G +  A+ L+  +    D    W+ ++ AC    + +
Sbjct: 569 KNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIE 628

Query: 453 EAIKTFKSMTQ-QQNASPDSVTLVNVISACG 482
                 +++ Q Q + +   V L N+ S+ G
Sbjct: 629 IGEIAAENLLQLQPDVASHYVLLSNIYSSAG 659



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 245/530 (46%), Gaps = 45/530 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +    +L+  Y        +  +F     +D V+WN++I+A        + +  F
Sbjct: 42  GSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAF 101

Query: 62  GEMVEEGIRFDSTTLL---IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             M+ EG    S TL+   +  S L + + L  G+ +H    + G     S  N  + MY
Sbjct: 102 RLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMY 160

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AK G L+ ++         D V+WN+++S    N    + L++ R M   G + D V+ +
Sbjct: 161 AKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFA 220

Query: 179 SAVAASACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           S + A + L  L  GK IHA  ++     E+S    V ++L+ MY  CG +E+    F  
Sbjct: 221 SVLPACSHLDLLRTGKEIHAYALRTDDVIENS---FVGSALVDMYCNCGQVESGRLVFDS 277

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  + +  WNA+I G+A +   E+A  L  EM+    +  +  T+ +++        +  
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR 337

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
              +HGY I+R L  +  + N+L+D YS+   +  ++ +F+++    D+VSWN++I+   
Sbjct: 338 KEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMED-RDIVSWNTIITSYV 396

Query: 355 ----------LFKEMLYLCSQFSFS----------------TLLAILPSCNSPESLEFGK 388
                     L  EM  +  + ++                 TL+ +LP C S  +L  GK
Sbjct: 397 ICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGK 456

Query: 389 SIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            IH + ++ L  S  T+G +AL+ MY  CG L  A  +  ++    +   WN++I+A   
Sbjct: 457 EIHAYAIRNLLASQVTVG-SALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGM 514

Query: 448 NGHFQEAIKTFKSMTQQ----QNASPDSVTLVNVISACGNLELAFEGKSL 493
           +G  +E+++ F+ M  +        P  VT + + ++C +  +  EG SL
Sbjct: 515 HGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSL 564



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/319 (21%), Positives = 139/319 (43%), Gaps = 47/319 (14%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA---CVENRCVVMG 57
           RG   +     +L+  YS +   ++S  +F    ++D+V+WN +IT+   C  +   ++ 
Sbjct: 348 RGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLL 407

Query: 58  LHFFGEMVEEGIRFD--------------STTLLIIVSALTQMNCLKQGRVVHCLSIKAG 103
           LH   + +EE   +D              S TL+ ++     ++ L +G+ +H  +I+  
Sbjct: 408 LHEM-QRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL 466

Query: 104 MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR 163
           + +  ++ +  V+MYAKCG LN +   F  M   + ++WN I+     +   ++ L  F 
Sbjct: 467 LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFE 526

Query: 164 EMGWSGEQADNVSLSSAV-----AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSL 217
           +M   G +   V  +        A+ +  G +  G  + H +  + G E +P       +
Sbjct: 527 DMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAP--DHYACI 584

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE---AFDLLHEMQL---- 270
           + +  + G +E A    +G+        N +  GF   G +     A  + H +++    
Sbjct: 585 VDLVGRAGKVEEA----YGLV-------NTMPSGFDKVGAWSSLLGACRIYHNIEIGEIA 633

Query: 271 ---MRSVEPDIATVVTLIS 286
              +  ++PD+A+   L+S
Sbjct: 634 AENLLQLQPDVASHYVLLS 652


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 221/767 (28%), Positives = 367/767 (47%), Gaps = 102/767 (13%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I+    ++  L+ G  VH   +  G+     L +  + +Y + G +  +   F  M   +
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 139 TVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
             SW  IM   C   +Y E   L++  M   G + D+        A + L     GK ++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYL-MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + +G+E +    V  S++ M+ +CG ++ A R F  +  KDV  WN ++ G+   G+
Sbjct: 214 DYMLSIGFEGNS--CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F++A   + +M+L   V+PD  T   +IS  A S    E                 L M 
Sbjct: 272 FKKALKCISDMKL-SGVKPDQVTWNAIISGYAQSGQFEEASKY------------FLEMG 318

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
            L DF  K N                 +VSW ++I+G            +F++M+    +
Sbjct: 319 GLKDF--KPN-----------------VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINC-------- 416
            +  T+ + + +C +   L  G+ IH + +K+   ++ + V N+L+  Y  C        
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 417 -------GDLVAAFSLLQ----RISHNS---------------DTSCWNIVIVACTQNGH 450
                   DLV+  ++L     R SH                 D   WN ++   TQ G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            + A++ F+ M       P++ T+   ++ACG +     GK +HG  L++ + L T V +
Sbjct: 480 GKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EP 567
           ALI+MY  C  ++ A +VF      ++  WN +ISA +Q+   V AL+L R +     E 
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           N +++VS L AC++L  LR GK+IH  +   G    +FI ++L+DMY  C          
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                +   +W+ MIS YG HG G +A+ LF +    G++P   +  +LLSACSHSGL++
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 718

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EG +Y+  M  EY + P  E + C+VD+L R+G+  E  EFI+ +P +P   VWG++L A
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           C  H +  + +  A  LF+LEP++ G Y+ ++N+Y A GRW+DA +I
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 197/783 (25%), Positives = 336/783 (42%), Gaps = 140/783 (17%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG----LHFFGEMVE 66
           + LL  Y      E +  +F +   ++V +W    TA +E  C +      +  F  MV 
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSW----TAIMEMYCGLGDYEETIKLFYLMVN 183

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+R D      +  A +++   + G+ V+   +  G   +S +    ++M+ KCG ++ 
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D   WN ++SG       +K L    +M  SG + D V+          
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW--------- 294

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKD---- 241
                                       N++IS Y+Q G  E A + F  M   KD    
Sbjct: 295 ----------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPN 326

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW A+I G   NG   EA  +  +M ++  V+P+  T+ + +S C +  LLR GR +H
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIH 385

Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           GY I+   L  DLL+ NSL+D+Y+K  S+  A   F  I    DLVSWN+M++G      
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK-QTDLVSWNAMLAGYALRGS 444

Query: 356 FKEMLYLCSQFSF------------------------------------------STLLA 373
            +E + L S+  F                                          +T+  
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
            L +C    +L+ GK IH + L+     +T   +AL+ MY  C  L  A S+   +S   
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS-TR 563

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN +I AC Q+G    A+   + M    N   ++VT+V+ + AC  L    +GK +
Sbjct: 564 DVVVWNSIISACAQSGRSVNALDLLREMN-LSNVEVNTVTMVSALPACSKLAALRQGKEI 622

Query: 494 HGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           H   ++   GLDT   + N+LI MYGRC  I+ +  +F+     +L +WN MIS +  + 
Sbjct: 623 HQFIIRC--GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680

Query: 552 AEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             + A+ L   FR +  +PN I+  ++LSAC+  G++  G +      +    +  +   
Sbjct: 681 FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWK------YFKMMKTEYAMD 734

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-- 666
             ++ Y         + M+      G+  E +E   +M      P  +   SLL AC   
Sbjct: 735 PAVEQY---------ACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIH 782

Query: 667 -HSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAYE---FIKNLPIQP 721
            +  L +   +Y       +++ P++  ++V + ++   +G+ ++A +    +K   +  
Sbjct: 783 CNPDLAEYAARYL------FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 836

Query: 722 KPG 724
            PG
Sbjct: 837 PPG 839



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 239/533 (44%), Gaps = 57/533 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYE-----TCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           T  ++++ Y+    FE +   F E         +VV+W A+I    +N      L  F +
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCG 122
           MV EG++ +S T+   VSA T ++ L+ GR +H   IK   + +D  + N  V+ YAKC 
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +   F  +   D VSWN +++G       E+ +    EM + G + D ++ +  V 
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472

Query: 183 ASACLGE----LSYGKVIHALG--------------------IKLGYEDSPYV------- 211
                G+    L + + +H++G                    +KLG E   YV       
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532

Query: 212 --SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              V ++LISMYS C  +E A   F  ++ +DVV WN+II   A +G+   A DLL EM 
Sbjct: 533 STGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 592

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           L  +VE +  T+V+ +  C+    LR+G+ +H + IR  L     ++NSL+D Y +  S+
Sbjct: 593 L-SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSI 651

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPS 377
            K+  +F+ + P  DLVSWN MIS             LF++   +  + +  T   +L +
Sbjct: 652 QKSRRIFD-LMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 710

Query: 378 CNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           C+    +E G K     + +            ++ +    G        ++++    + +
Sbjct: 711 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 770

Query: 437 CWNIVIVACTQ--NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            W  ++ AC    N    E    +    + Q +S + V + N+ SA G  E A
Sbjct: 771 VWGSLLGACRIHCNPDLAEYAARYLFELEPQ-SSGNYVLMANIYSAAGRWEDA 822



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 30/233 (12%)

Query: 567 PNE-ISI-VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNA- 621
           P+E I I  SIL  C +L  LR G Q+H  +   G     F+ S LL++Y  + C  +A 
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 622 ------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                       +W++++  Y   G   E I+LF+ M N G+RP       +  ACS   
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVC----IVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
               G   Y+ ML         E + C    I+DM  + G++  A  F + +  +    +
Sbjct: 205 NYRVGKDVYDYMLS-----IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFM 258

Query: 726 WGAMLSACSHHGDTKMG-KQVAEL-LFKLEPENVGYYISLSNMYVALGRWKDA 776
           W  M+S  +  G+ K   K ++++ L  ++P+ V +   +S  Y   G++++A
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEA 310


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 218/723 (30%), Positives = 375/723 (51%), Gaps = 46/723 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H L+  +G+ +        V+ Y+  G    +   FS   C DT  WN+++      + 
Sbjct: 34  LHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASD 93

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-EDSPYVSV 213
            +  L   R M  SG +    +   A +A+A L  L  G  +H+  +K G       V+V
Sbjct: 94  FDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAV 153

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR- 272
           ++SL+ MY++CG +  A + F  M  +DVV+W A++ G   NG+  +    L  +Q++R 
Sbjct: 154 SSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYL--VQMIRL 211

Query: 273 ----SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
                  P+  T+ + +  C     L  GR +HGYA++  +    L++++L   YSK + 
Sbjct: 212 AGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDM 271

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA--ILPSC--- 378
              A +LF  +    D+VSW  +I      GL +E + L  +   S L    +L SC   
Sbjct: 272 TEDACILFPELTE-KDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLS 330

Query: 379 --NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
              S  ++  GK+ H   ++  F ++ +  N+L+ MY    +LV     +  + H  D  
Sbjct: 331 GLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKF-ELVDVAGTVFGMLHQRDDE 389

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLH 494
            W++++    + G   + ++ ++ M  + +     D  +LV+ IS+C  L     G+S+H
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAE 553
             ++K L+  +  + N+LI MYGRC + + A  +F  +    ++ TWN +IS++S     
Sbjct: 450 CYSIKCLLD-ENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRS 508

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL L+  +   + +PN  ++++++SAC  L  L HG+ +H +V ++G + +  IS+AL
Sbjct: 509 NDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTAL 568

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               +    W+ MIS YG HG+  +A++LF EM    I+P  
Sbjct: 569 VDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNS 628

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + +++LSAC H+GLVDEG + +  M   Y + P  +H+ C+VD+LG+SG LQEA + + 
Sbjct: 629 LTFLAILSACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVL 687

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +PI+P  GVWG +LSAC  H + +MG +VA+  F  +P N GYYI +SN Y +  +W D
Sbjct: 688 AMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKW-D 746

Query: 776 AVE 778
            +E
Sbjct: 747 EIE 749



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 207/757 (27%), Positives = 350/757 (46%), Gaps = 72/757 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA--CVENRCVVMGLHFFGEMVEE 67
           +  L++AYS+      +   F  +   D   WN+++ +  C  +    +  H    M   
Sbjct: 50  AAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASDFDSALSAHR--RMRAS 107

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS---SLCNVFVNMYAKCGDL 124
           G R    T  +  SA  ++  L  G  VH  S+K G++A     ++ +  V MYA+CG L
Sbjct: 108 GARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSL 167

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM----GWSGEQADNVSLSSA 180
             +   F  M   D V+W  ++SGC+ N    K + Y  +M    G SG + ++ ++ S 
Sbjct: 168 GDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESG 227

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LGELS G+ +H   +K G  D     V ++L SMYS+C   E A   F  +T K
Sbjct: 228 LEACGVLGELSAGRCLHGYAVKEGIRDCAL--VVSALFSMYSKCDMTEDACILFPELTEK 285

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW  +I  +   G   EA +L  EM+    ++PD   V  ++S    S  +  G++ 
Sbjct: 286 DVVSWTGLIGAYCRRGLAREAVELFQEME-QSGLQPDEVLVSCVLSGLGSSANVNRGKAF 344

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   IRR  G  +L+ NSL+  Y K   +  A  +F  +   +D  SW+ M++G      
Sbjct: 345 HAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDD-ESWSLMVAGYCKAGL 403

Query: 355 ------LFKEML------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                 L+++M       +LC     ++L++ + SC+    L  G+S+HC+ +K     N
Sbjct: 404 DVKCLELYRQMQCRDHDEFLC---DITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN 460

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           +I  N+L+ MY  CG+   A  +        D   WN +I + +  G   +A+  +  M 
Sbjct: 461 SI-TNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQML 519

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
             ++  P+S TL+ VISAC NL     G+ LH       +  D  +  AL+ MY +C  +
Sbjct: 520 -TEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQL 578

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
            +A  +F+S    ++ TWN MIS +  +    +AL+LF  +E    +PN ++ ++ILSAC
Sbjct: 579 GTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSAC 638

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
              G++  G+++             FI      +  N K    ++ M+   G  G   EA
Sbjct: 639 CHAGLVDEGRKL-------------FIRMGGYRLEPNLKH---YACMVDLLGKSGLLQEA 682

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIV 698
            +L   M    I+P      +LLSAC      + GL+      + +   P  + +++ + 
Sbjct: 683 EDLVLAM---PIKPDGGVWGTLLSACKVHDNFEMGLRVAK---KAFSSDPRNDGYYILMS 736

Query: 699 DMLGRSGK---LQEAYEFIKNLPIQPKPG-----VWG 727
           +  G + K   +++  + +KN  ++   G     VWG
Sbjct: 737 NSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAVDVWG 773



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 2/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  ST+L+  Y+      ++  +F     +DVVTWN MI+    +      L  F
Sbjct: 557 GLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLF 616

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    I+ +S T L I+SA      + +GR +        +  +       V++  K 
Sbjct: 617 SEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKS 676

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNY 154
           G L  +E     M    D   W T++S C +H+N+
Sbjct: 677 GLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNF 711


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 213/678 (31%), Positives = 342/678 (50%), Gaps = 51/678 (7%)

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFRE---MGWSGEQADNVSLSSAVAASACLGELSYGKV 195
           T S N  +S  L  N P + L  F+E   +G+ G   D V+L   +A  AC G+L  G  
Sbjct: 40  TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTL--CLALKACRGDLKRGCQ 97

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH      G+  + +V V+N+++ MY + G  + A   F  +   DVVSWN I+ GF  N
Sbjct: 98  IHGFSTTSGF--TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN 155

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
              + A + +  M+    V  D  T  T +S C  S     G  +    ++  L  DL++
Sbjct: 156 ---QIALNFVVRMK-SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYL 362
            NS +  YS+S S   A  +F+ ++   D++SWNS++SGL             F++M+  
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +    +  +++ +C     L+  + IH   +K G+ +     N LM  Y  CG L A 
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
            S+  ++S  +  S W  +I     + +  +A+  F +M +     P+ VT V +I+A  
Sbjct: 331 KSVFHQMSERNVVS-WTTMI-----SSNKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVK 383

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
             E   EG  +HGL +K+    +  V N+ IT+Y +   ++ A   FE      + +WN 
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443

Query: 543 MISAFSQNKAEVRALELFRHLEFE--PNEISIVSILSACT--QLGVLRHGKQIHGHVFHL 598
           MIS F+QN     AL++F     E  PNE +  S+L+A    +   ++ G++ H H+  L
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503

Query: 599 GFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELF 643
           G      +SSALLDMY+               + K+   W+S+ISAY  HG     + LF
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
           H+M    + P   + +S+L+AC+  G+VD+G + +N M+E Y++ P  EH+ C+VDMLGR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G+L+EA E +  +P  P   +  +ML +C  HG+ KMG +VAEL  +++PE  G Y+ +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683

Query: 764 SNMYVALGRWKDAVEIGK 781
            N+Y     W  A EI K
Sbjct: 684 YNIYAEKEEWDKAAEIRK 701



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 178/642 (27%), Positives = 299/642 (46%), Gaps = 58/642 (9%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  TL + + A      LK+G  +H  S  +G  +   + N  + MY K G  +++
Sbjct: 73  GRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNA 130

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            C F  +   D VSWNTI+SG   N   +  L +   M  +G   D  + S+A+  S C+
Sbjct: 131 LCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCV 185

Query: 188 GELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           G   +  G  + +  +K G E    + V NS I+MYS+ G    A R F  M+ KD++SW
Sbjct: 186 GSEGFLLGLQLQSTVVKTGLESD--LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243

Query: 246 NAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N+++ G +  G F  EA  +  +M +   VE D  +  ++I+ C     L+  R +HG  
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302

Query: 305 IRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
           I+R  GY+ L+   N LM  YSK   L   + +F+ ++  N +VSW +MIS    + + +
Sbjct: 303 IKR--GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN-VVSWTTMISSNKDDAVSI 359

Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
                F        T + ++ +    E ++ G  IH   +K GF +     N+ + +Y  
Sbjct: 360 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
              L  A    + I+     S WN +I    QNG   EA+K F S   +    P+  T  
Sbjct: 420 FEALEDAKKAFEDITFREIIS-WNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYTFG 476

Query: 476 NVISACGNLE--LAFEGKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFES 531
           +V++A    E     +G+  H   LK  +GL++   V +AL+ MY +  +I  +  VF  
Sbjct: 477 SVLNAIAFAEDISVKQGQRCHAHLLK--LGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               N   W  +ISA+S +      + LF  +  E   P+ ++ +S+L+AC + G++  G
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            +I    F++           ++++Y+   S+  +S M+   G  G+  EA EL  E+  
Sbjct: 595 YEI----FNM-----------MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPG 639

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
               P +S + S+L +C   G V  G +     +E   ++PE
Sbjct: 640 G---PGESMLQSMLGSCRLHGNVKMGAKVAELAME---MKPE 675



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 288/637 (45%), Gaps = 64/637 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S +++  Y     F+++L +F    + DVV+WN +++   +N+   + L+F 
Sbjct: 106 GFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ---IALNFV 162

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+ FD+ T    +S          G  +    +K G+ +D  + N F+ MY++ 
Sbjct: 163 VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRS 222

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G    +   F  M   D +SWN+++SG      +  + ++ FR+M   G + D+VS +S 
Sbjct: 223 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSV 282

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +       +L   + IH L IK GYE    + V N L+S YS+CG +EA +  F  M+ +
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKRGYE--SLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW  +I     +   ++A  +   M+    V P+  T V LI+    +  ++EG  +
Sbjct: 341 NVVSWTTMI-----SSNKDDAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKI 394

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-- 358
           HG  I+     +  + NS +  Y+K  +L  A+  F  I    +++SWN+MISG  +   
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT-FREIISWNAMISGFAQNGF 453

Query: 359 -----MLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 ++L +       +++F ++L  +       S++ G+  H   LKLG ++  +  
Sbjct: 454 SHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVS 512

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +AL+ MY   G++  +  +   +S   +   W  +I A + +G F+  +  F  M  ++N
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSHGDFETVMNLFHKMI-KEN 570

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            +PD VT ++V++AC                 K ++     + N +I +Y          
Sbjct: 571 VAPDLVTFLSVLTACNR---------------KGMVDKGYEIFNMMIEVYN--------- 606

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
              E  +      ++CM+    +      A EL   +   P E  + S+L +C   G ++
Sbjct: 607 --LEPSHE----HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
            G +    V  L  +    +S + + MY+       W
Sbjct: 661 MGAK----VAELAMEMKPELSGSYVQMYNIYAEKEEW 693



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 24/348 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+ + L     L++ YS     E+  ++F++   ++VV+W  MI++  ++      +  
Sbjct: 305 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSI 359

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  +G+  +  T + +++A+     +K+G  +H L IK G +++ S+ N F+ +YAK
Sbjct: 360 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L  ++  F  +   + +SWN ++SG   N +  + L  F  +  + E   N     +
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGS 477

Query: 181 VAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           V  +    E   +  G+  HA  +KLG    P VS  ++L+ MY++ G+I+ +E+ F  M
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEM 535

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + K+   W +II  ++ +G FE   +L H+M +  +V PD+ T +++++ C      R+G
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACN-----RKG 589

Query: 298 RSVHGYAIRRLL--GYDLLMMNS----LMDFYSKSNSLSKAELLFNAI 339
               GY I  ++   Y+L   +     ++D   ++  L +AE L + +
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 209/668 (31%), Positives = 342/668 (51%), Gaps = 54/668 (8%)

Query: 154 YPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL----GIKLGYED 207
           +P +C+ +   +E+  + E+ D  SL  A A+S C   LS    I +L    G+  G   
Sbjct: 15  FPPRCVSFTTIKELILT-EENDGSSLHYA-ASSPCFLLLSKCTNIDSLRQSHGVLTGNGL 72

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
              +S+   L+S+Y   G  + A   F  +   D   W  ++  + LN +  E   L ++
Sbjct: 73  MGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL-YD 131

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           + +      D       +  C +   L  G+ +H   ++ +  +D +++  L+D Y+K  
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-VPSFDNVVLTGLLDMYAKCG 190

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEML---------------YLCSQFSFSTLL 372
            +  A  +FN I  + ++V W SMI+G  K  L                L +++++ TL+
Sbjct: 191 EIKSAHKVFNDIT-LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
               +C    +L  GK  H   +K G   ++  V +L+ MY+ CGD+  A  +    SH 
Sbjct: 250 M---ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH- 305

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  +IV  T NG   EA+  F+ M   +   P+ VT+ +V+S CG +E    G+S
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRS 364

Query: 493 LHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           +HGL++K  +G+ DT V NAL+ MY +C   + A  VFE     ++  WN +IS FSQN 
Sbjct: 365 VHGLSIK--VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FI 606
           +   AL LF  +  E   PN +++ S+ SAC  LG L  G  +H +   LGF  +S   +
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            +ALLD Y+ C               K+   WS+MI  YG  G    ++ELF EM     
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P +S+  S+LSAC H+G+V+EG +Y+++M ++Y+  P T+H+ C+VDML R+G+L++A 
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           + I+ +PIQP    +GA L  C  H    +G+ V + +  L P++  YY+ +SN+Y + G
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662

Query: 772 RWKDAVEI 779
           RW  A E+
Sbjct: 663 RWNQAKEV 670



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 263/544 (48%), Gaps = 23/544 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  +T L++ Y    Y + +  +F +    D   W  M+     N+  V  +  +
Sbjct: 71  GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +++ G R+D       + A T++  L  G+ +HC  +K     D+ +    ++MYAKC
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKC 189

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ S+   F+ +   + V W ++++G + N+  E+ L+ F  M  +    +  +  + +
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L  L  GK  H   +K G E S    +  SL+ MY +CGDI  A R F   +  D
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSS--CLVTSLLDMYVKCGDISNARRVFNEHSHVD 307

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V W A+I G+  NG   EA  L  +M+ +  ++P+  T+ +++S C     L  GRSVH
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVH 366

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
           G +I+  + +D  + N+L+  Y+K      A+ +F  +    D+V+WNS+ISG       
Sbjct: 367 GLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSI 424

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGV-N 407
            E L+L  + +         T+ ++  +C S  SL  G S+H + +KLGF +++++ V  
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y  CGD  +A  +   I    +T  W+ +I    + G    +++ F+ M ++Q  
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ- 542

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSAS 526
            P+  T  +++SACG+  +  EGK       K       T+    ++ M  R  +++ A 
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602

Query: 527 TVFE 530
            + E
Sbjct: 603 DIIE 606



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 233/486 (47%), Gaps = 27/486 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T LL  Y+     +S+  +F +   ++VV W +MI   V+N     GL  F  M E  + 
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   ++ A T+++ L QG+  H   +K+G+   S L    ++MY KCGD++++   
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+     D V W  ++ G  HN    + L  F++M     + + V+++S ++    +  L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ +H L IK+G  D+   +V N+L+ MY++C     A+  F   + KD+V+WN+II 
Sbjct: 360 ELGRSVHGLSIKVGIWDT---NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF+ NG   EA  L H M    SV P+  TV +L S CA    L  G S+H Y+++  LG
Sbjct: 417 GFSQNGSIHEALFLFHRMN-SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK--LG 473

Query: 311 Y----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           +     + +  +L+DFY+K      A L+F+ I   N  ++W++MI G            
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT-ITWSAMIGGYGKQGDTIGSLE 532

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMY 413
           LF+EML    + + ST  +IL +C     +  GK       K   F+ +T     ++ M 
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G+L  A  +++++    D  C+   +  C  +  F       K M    +  PD  +
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML---DLHPDDAS 649

Query: 474 LVNVIS 479
              ++S
Sbjct: 650 YYVLVS 655


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 313/594 (52%), Gaps = 35/594 (5%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            +IS++ + G    A R F  +  K  V ++ ++ G+A N    +A      M +   V 
Sbjct: 84  KVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRM-MCDEVR 142

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
             +     L+ LC ++L L++GR +HG  I      +L +M ++M  Y+K   +  A  +
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202

Query: 336 FNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPSCNSPES 383
           F  +    DLVSW ++++G       K  L L  Q   +       TL++ILP+    ++
Sbjct: 203 FERMQH-KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G+SIH +  + GF +     NAL+ MY  CG    A  + + +   +  S WN +I 
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVS-WNTMID 320

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
            C QNG  +EA  TF  M  +    P  VT++ V+ AC NL     G  +H L  K  + 
Sbjct: 321 GCAQNGESEEAFATFLKMLDEGEV-PTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLD 379

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V N+LI+MY +C+ +  A+++F +    N+ TWN MI  ++QN     AL LF  +
Sbjct: 380 SNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMM 438

Query: 564 EFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           + +  ++   ++V +++A     V R  K IHG         N F+S+AL+DMY+ C   
Sbjct: 439 QSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAI 498

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W++MI  YG HG G E ++LF+EM    ++P   + +S++SAC
Sbjct: 499 KTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISAC 558

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSG V+EGL  + +M E+Y + P  +H+  +VD+LGR+G+L +A+ FI+ +PI+P   V
Sbjct: 559 SHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISV 618

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            GAML AC  H + ++G++ A+ LFKL+P+  GY++ L+N+Y +   W    ++
Sbjct: 619 LGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKV 672



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 253/516 (49%), Gaps = 31/516 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++L   T++++ Y+     +++  +F    +KD+V+W  ++    +N      L   
Sbjct: 175 GFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLV 234

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E G + DS TL+ I+ A+  M  L+ GR +H  + ++G  +  ++ N  ++MY KC
Sbjct: 235 LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F GM     VSWNT++ GC  N   E+    F +M   GE    V++   +
Sbjct: 295 GSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVL 354

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG+L  G  +H L  KL  + +  VSV NSLISMYS+C  ++ A   F  +  K 
Sbjct: 355 LACANLGDLERGWFVHKLLDKLKLDSN--VSVMNSLISMYSKCKRVDIAASIFNNLE-KT 411

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WNA+I G+A NG  +EA +L   MQ  + ++ D  T+V +I+  AD  + R+ + +H
Sbjct: 412 NVTWNAMILGYAQNGCVKEALNLFCMMQ-SQGIKLDCFTLVGVITALADFSVNRQAKWIH 470

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G A+R  +  ++ +  +L+D Y+K  ++  A  LF+ +   + +++WN+MI G       
Sbjct: 471 GLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERH-VITWNAMIDGYGTHGVG 529

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG-VNA 408
                LF EM     + +  T L+++ +C+    +E G  +     +  +   T+   +A
Sbjct: 530 KETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSA 589

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ +    G L  A++ +Q +      S    ++ AC  + + +   K  + + +     
Sbjct: 590 MVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFK---LD 646

Query: 469 PDS----VTLVNVISA------CGNLELAFEGKSLH 494
           PD     V L N+ ++         +  A E K LH
Sbjct: 647 PDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLH 682



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 220/464 (47%), Gaps = 19/464 (4%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
           V ++ M+    +N  +   L FF  M+ + +R        ++    +   LK+GR +H L
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
            I  G  ++  +    +++YAKC  ++++   F  M   D VSW T+++G   N + ++ 
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L    +M  +G++ D+V+L S + A A +  L  G+ IH    + G+E    V+VTN+L+
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFES--LVNVTNALL 288

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
            MY +CG    A   F GM  K VVSWN +IDG A NG+ EEAF    +M L     P  
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKM-LDEGEVPTR 347

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T++ ++  CA+   L  G  VH    +  L  ++ +MNSL+  YSK   +  A  +FN 
Sbjct: 348 VTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNN 407

Query: 339 IAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEF 386
           +   N  V+WN+MI     +G  KE L L              TL+ ++ +         
Sbjct: 408 LEKTN--VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQ 465

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
            K IH   ++    NN     AL+ MY  CG +  A  L   +      + WN +I    
Sbjct: 466 AKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVIT-WNAMIDGYG 524

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            +G  +E +  F  M Q+    P+ +T ++VISAC +     EG
Sbjct: 525 THGVGKETLDLFNEM-QKGAVKPNDITFLSVISACSHSGFVEEG 567


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/603 (31%), Positives = 311/603 (51%), Gaps = 40/603 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + ++L   Y+ CG I  A + F  M    ++S+N +I  +   G + +A  +   M +  
Sbjct: 51  ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRM-VSE 109

Query: 273 SVE--PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
            V+  PD  T   +     +   ++ G  VHG  +R   G D  + N+L+  Y     + 
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ +    D++SWN+MISG            +F  M+        +T++++LP C
Sbjct: 170 MARDVFDVMKN-RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              + LE G+++H    +    +     NAL++MY+ CG +  A  +  R+    D   W
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR-DVITW 287

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I   T++G  + A++  + M Q +   P++VT+ +++S CG+     +GK LHG A+
Sbjct: 288 TCMINGYTEDGDVENALELCRLM-QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +  +  D  ++ +LI+MY +C+ +     VF      +   W+ +I+   QN+    AL 
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +   + EPN  ++ S+L A   L  LR    IH ++   GF  +   ++ L+ +YS
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466

Query: 616 NC-------------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            C                   K    W ++IS YG HG G  A+++F EM  SG+ P + 
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  S L+ACSHSGLV+EGL  +  MLE Y     + H+ CIVD+LGR+G+L EAY  I  
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P +P   VWGA+L+AC  H + ++G+  A  LF+LEPEN G Y+ L+N+Y ALGRWKD 
Sbjct: 587 IPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDM 646

Query: 777 VEI 779
            ++
Sbjct: 647 EKV 649



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 267/576 (46%), Gaps = 23/576 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L   Y+   +   +  LF E     ++++N +I   V        +  F  MV EG++
Sbjct: 53  STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112

Query: 71  --FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              D  T   +  A  ++  +K G VVH   +++    D  + N  + MY   G +  + 
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D +SWNT++SG   N Y    L+ F  M       D+ ++ S +     L 
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ +H L  +    D   + V N+L++MY +CG ++ A   F  M  +DV++W  +
Sbjct: 233 DLEMGRNVHKLVEEKRLGDK--IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I+G+  +G  E A +L   MQ    V P+  T+ +L+S+C D+L + +G+ +HG+A+R+ 
Sbjct: 291 INGYTEDGDVENALELCRLMQF-EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNA-----IAPMNDLVS---WNSMIS---GLFK 357
           +  D+++  SL+  Y+K   +     +F+        P + +++    N ++S   GLFK
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + + +TL ++LP+  +   L    +IHC+  K GF ++      L+H+Y  CG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469

Query: 418 DLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            L +A   F+ +Q    + D   W  +I     +G    A++ F  M  +   +P+ +T 
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV-RSGVTPNEITF 528

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESC- 532
            + ++AC +  L  EG +L    L+    L  +     ++ + GR   +  A  +  +  
Sbjct: 529 TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588

Query: 533 YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEP 567
           +      W  +++A  +    ++  +   +  E EP
Sbjct: 589 FEPTSTVWGALLAACVTHENVQLGEMAANKLFELEP 624



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 16/357 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +    +L+  Y      + +  +F     +DV+TW  MI    E+  V   L     M  
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+R ++ T+  +VS       +  G+ +H  +++  + +D  +    ++MYAKC  ++ 
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               FSG     T  W+ I++GC+ N      L  F+ M     + +  +L+S + A A 
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM----TCKDV 242
           L +L     IH    K G+  S  +     L+ +YS+CG +E+A + F G+      KDV
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSS--LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVH 301
           V W A+I G+ ++G    A  +   M+++RS V P+  T  + ++ C+ S L+ EG ++ 
Sbjct: 491 VLWGALISGYGMHGDGHNALQVF--MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548

Query: 302 GYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            + +     Y  L  ++    ++D   ++  L +A  L   I        W ++++ 
Sbjct: 549 RFMLEH---YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF----YETCNKDVVTWNAMITACVENRCVVMG 57
           GF++ L  +T L+  YS     ES+  +F     +  +KDVV W A+I+    +      
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVN 116
           L  F EMV  G+  +  T    ++A +    +++G  +    ++    +A S+     V+
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569

Query: 117 MYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGCL-HNN 153
           +  + G L+ +    + +    T + W  +++ C+ H N
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHEN 608


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 211/669 (31%), Positives = 341/669 (50%), Gaps = 75/669 (11%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           + D+ +LSS + A A L   + G  +HA  I+ G +   Y  V N+L+S Y++  D+ + 
Sbjct: 50  KPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLK--AYTHVGNTLLSFYAKSKDLVSV 107

Query: 231 ERAFWGMTCKDV-------------------------------VSWNAIIDGFALNGKFE 259
           +R F  +   DV                               V WNAII G A N   E
Sbjct: 108 QRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTE 167

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
            A +L  EM  +  V  D  T  +++SLC+  LL   GR VH   I+        ++N+L
Sbjct: 168 IALNLFREMHQL-GVRHDKYTFASVLSLCSLELL-DFGREVHTLVIKTGFLVRASVINAL 225

Query: 320 MDFYSKSNSLSKA-ELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQF 366
           +  Y  S  ++ A E+   A + ++D +++N MI GL            FKEM   C + 
Sbjct: 226 LTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRP 285

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +  T ++++ SC+S         +H   +K+GF   T   NA M MY +CG+L A   + 
Sbjct: 286 TELTFVSVMSSCSSAR---VSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVF 342

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            R+    D   WNI+I+   Q   ++ AI  F  M Q+    PD  T+ +++++  +LE+
Sbjct: 343 DRLEEK-DLISWNIIIMNYAQGNFYRLAILAFLQM-QRAGIEPDEFTIGSLLASSESLEI 400

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
               K    L  K+ +     V NAL++ + +   I+ A  VF +  + NL +WN +IS 
Sbjct: 401 V---KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISG 457

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           F  N   ++ LE F  L     +PN  ++  +LS C  +  LRHGKQIHG++   G    
Sbjct: 458 FLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSV 517

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           + + +AL+ MY+ C               +   +W++MISAY  HGKG EA+  F  M +
Sbjct: 518 TSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQD 577

Query: 649 SG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
           SG ++P +++  ++LSACSH+GLVD+G + +N+M+ +Y   P  +H  CIVD+LGR+G L
Sbjct: 578 SGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYL 637

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +EA   I +  ++    +W  + SAC+ HG+ ++G+ VA  L ++E  +   Y+ LSN+Y
Sbjct: 638 EEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIY 697

Query: 768 VALGRWKDA 776
            A G+W++A
Sbjct: 698 AAAGQWEEA 706



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 183/614 (29%), Positives = 295/614 (48%), Gaps = 72/614 (11%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL+A + +     +  LF +T     V WNA+IT C EN+   + L+ F EM + G+R
Sbjct: 123 TTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVR 182

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T   ++S L  +  L  GR VH L IK G +  +S+ N  + MY   G +  +   
Sbjct: 183 HDKYTFASVLS-LCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEV 241

Query: 131 F----SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           F    S +H  D +++N ++ G       E+ L+ F+EM  +  +   ++  S V +S  
Sbjct: 242 FEEAESTVH--DDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVS-VMSSCS 298

Query: 187 LGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              +S+   +HA  IK+G+E  +P   V+N+ ++MYS CG++ A    F  +  KD++SW
Sbjct: 299 SARVSHQ--VHAQAIKMGFEACTP---VSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISW 353

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N II  +A  G F     +L  +Q+ R+ +EPD     T+ SL A S  L   +      
Sbjct: 354 NIIIMNYA-QGNFYR-LAILAFLQMQRAGIEPD---EFTIGSLLASSESLEIVKMFQALV 408

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------- 355
            +  L   + + N+L+  +SK   + +A  +FN ++  N L+SWN++ISG          
Sbjct: 409 SKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPN-LISWNTIISGFLFNGFTLQG 467

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMH 411
              F E+L    + +  TL  +L  C S  +L  GK IH + L+ G FS  ++G NAL+ 
Sbjct: 468 LEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLG-NALIT 526

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CGDL  +  +   + +  D   WN +I A  Q+G  +EA+  FK+M       PD 
Sbjct: 527 MYAKCGDLDWSLRIFN-VMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQ 585

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T   V+SAC +  L  +G               TR+ N+++  YG           FE 
Sbjct: 586 ATFTAVLSACSHAGLVDDG---------------TRIFNSMVNDYG-----------FEP 619

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIV--SILSACTQLGVLRHGK 589
             +   C  + +  A    +AE   L   +HL+     +S +  ++ SAC   G LR G+
Sbjct: 620 GADHLSCIVDLLGRAGYLEEAE--RLINSKHLKI----VSSIWWTLFSACAAHGNLRLGR 673

Query: 590 QIHGHVFHLGFQEN 603
            + G  F L  ++N
Sbjct: 674 IVAG--FLLEIEQN 685



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 184/716 (25%), Positives = 316/716 (44%), Gaps = 101/716 (14%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D  TL   ++A   +     G  +H  SI+ G+ A + + N  ++ YAK  DL S +
Sbjct: 49  LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108

Query: 129 CTFSGMHCADTVSWNTIMS-------------------------------GCLHNNYPEK 157
             F+ +   D  SW T++S                               GC  N + E 
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEI 168

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASAC-LGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
            L  FREM   G + D  + +S +  S C L  L +G+ +H L IK G+      SV N+
Sbjct: 169 ALNLFREMHQLGVRHDKYTFASVL--SLCSLELLDFGREVHTLVIKTGF--LVRASVINA 224

Query: 217 LISMYSQCGDIEAAERAFWGM--TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           L++MY   G +  A   F     T  D +++N +I G A  G+ EEA  +  EMQ    +
Sbjct: 225 LLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQ-EACL 283

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKA 332
            P   T V+++S C+ +   R    VH  AI+  +G++    + N+ M  YS   +L   
Sbjct: 284 RPTELTFVSVMSSCSSA---RVSHQVHAQAIK--MGFEACTPVSNAAMTMYSSCGNLHAV 338

Query: 333 ELLFNAIAPMNDLVSWNSMI----SGLFKEMLYLC-----------SQFSFSTLLAILPS 377
            ++F+ +    DL+SWN +I     G F  +  L             +F+  +LLA    
Sbjct: 339 HMVFDRLEE-KDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLA---- 393

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
             S ESLE  K       K G ++     NAL+  +   G +  A+ +   +S + +   
Sbjct: 394 --SSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMS-SPNLIS 450

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I     NG   + ++ F  +       P++ TL  V+S C ++     GK +HG  
Sbjct: 451 WNTIISGFLFNGFTLQGLEQFYELL-MSTLKPNAYTLSIVLSICASISALRHGKQIHGYI 509

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           L+S +   T + NALITMY +C D+  +  +F      ++ +WN MISA++Q+     A+
Sbjct: 510 LRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAV 569

Query: 558 ELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQI-HGHVFHLGFQENSFISSALLD 612
             F+ ++     +P++ +  ++LSAC+  G++  G +I +  V   GF+  +   S ++D
Sbjct: 570 HFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVD 629

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV-ISLLSACSHSGLV 671
           +                 GY       +E    + NS      SS+  +L SAC+  G +
Sbjct: 630 LLGRA-------------GY-------LEEAERLINSKHLKIVSSIWWTLFSACAAHGNL 669

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPG 724
             G      +LE     P    +V + ++   +G+ +EA    + ++   +  +PG
Sbjct: 670 RLGRIVAGFLLEIEQNDPAV--YVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPG 723



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 234/510 (45%), Gaps = 29/510 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GFL       +LLT Y N      +  +F   E+   D +T+N MI            L 
Sbjct: 214 GFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALI 273

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F EM E  +R    T L  VS ++  +  +    VH  +IK G  A + + N  + MY+
Sbjct: 274 MFKEMQEACLR---PTELTFVSVMSSCSSARVSHQVHAQAIKMGFEACTPVSNAAMTMYS 330

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            CG+L++    F  +   D +SWN I+      N+    +L F +M  +G + D  ++ S
Sbjct: 331 SCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGS 390

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +A+S  L  +   K+  AL  K G      + V+N+L+S +S+ G IE A + F  M+ 
Sbjct: 391 LLASSESLEIV---KMFQALVSKNGLNSK--IEVSNALVSAFSKHGQIEQAYQVFNNMSS 445

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            +++SWN II GF  NG   +  +  +E+ LM +++P+  T+  ++S+CA    LR G+ 
Sbjct: 446 PNLISWNTIISGFLFNGFTLQGLEQFYEL-LMSTLKPNAYTLSIVLSICASISALRHGKQ 504

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
           +HGY +R  +     + N+L+  Y+K   L  +  +FN +    D+VSWN+MIS     G
Sbjct: 505 IHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNG-RDIVSWNAMISAYAQHG 563

Query: 355 LFKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIG 405
             KE ++       S        T  A+L +C+    ++ G  I    +   GF      
Sbjct: 564 KGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADH 623

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ--EAIKTFKSMTQ 463
           ++ ++ +    G L  A  L+        +S W  +  AC  +G+ +    +  F  +  
Sbjct: 624 LSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFL-LEI 682

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSL 493
           +QN     V L N+ +A G  E A   + L
Sbjct: 683 EQNDPAVYVLLSNIYAAAGQWEEAANTRDL 712



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 251/569 (44%), Gaps = 107/569 (18%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           ++PD  T+ + ++ CA+      G  +H Y+I+  L     + N+L+ FY+KS  L   +
Sbjct: 49  LKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQ 108

Query: 334 LLFNAI------------------------------APMNDLVSWNSMISG--------- 354
            +FN I                               P    V WN++I+G         
Sbjct: 109 RVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEI 168

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF+EM  L  +    T  ++L  C S E L+FG+ +H   +K GF      +NAL+ 
Sbjct: 169 ALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLT 227

Query: 412 MYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           MY N G +  A+ + +   S   D   +N++I      G  +EA+  FK M Q+    P 
Sbjct: 228 MYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEM-QEACLRPT 286

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTV 528
            +T V+V+S+C +  ++ +   +H  A+K  MG +  T V NA +TMY  C ++ +   V
Sbjct: 287 ELTFVSVMSSCSSARVSHQ---VHAQAIK--MGFEACTPVSNAAMTMYSSCGNLHAVHMV 341

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           F+     +L +WN +I  ++Q      A+  F  ++    EP+E +I S+L++   L ++
Sbjct: 342 FDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV 401

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYS------------NCKSNA---AWSSMISAY 630
              K     V   G      +S+AL+  +S            N  S+    +W+++IS +
Sbjct: 402 ---KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGF 458

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY------------ 678
            ++G   + +E F+E+  S ++P   ++  +LS C+    +  G Q +            
Sbjct: 459 LFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVT 518

Query: 679 ---NNMLEEYDVRPETEHHVCIVDML-GRS--------------GKLQEAYEFIKNLP-- 718
              N ++  Y    + +  + I +++ GR               GK +EA  F K +   
Sbjct: 519 SLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDS 578

Query: 719 --IQPKPGVWGAMLSACSHHGDTKMGKQV 745
             ++P    + A+LSACSH G    G ++
Sbjct: 579 GGVKPDQATFTAVLSACSHAGLVDDGTRI 607



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 52/279 (18%)

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N ++   T++ H   +++ F  +       PD  TL + ++AC NL  A  G  LH  ++
Sbjct: 21  NQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSI 80

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESC----------------------YNCN 536
           ++ +   T V N L++ Y + +D+ S   VF                         Y C+
Sbjct: 81  QTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACH 140

Query: 537 L---------CTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGV 584
           L           WN +I+  ++NK    AL LFR    L    ++ +  S+LS C+ L +
Sbjct: 141 LFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LEL 199

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMY-----------------SNCKSNAAWSSMI 627
           L  G+++H  V   GF   + + +ALL MY                 S    +  ++ MI
Sbjct: 200 LDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMI 259

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                 G+  EA+ +F EM  + +RPT+ + +S++S+CS
Sbjct: 260 GGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 208/726 (28%), Positives = 365/726 (50%), Gaps = 40/726 (5%)

Query: 88  CLKQGRV-----VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
           C+  G V     V+C++ K G+  D+ +C+  +++ AK G    +   F        V W
Sbjct: 79  CVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCW 138

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           NT++SG + N+     +  F +M     + ++ + S  ++A A   EL  G+ +H L ++
Sbjct: 139 NTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLR 198

Query: 203 LGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
               D  Y V V  S+++MY++ GD+ AA R FW M  ++VVSW   I GF    +   A
Sbjct: 199 ---RDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSA 255

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
             LL EM +   V  +  T  +++  C+   ++RE   +HG  +++ L  D  +  +L+ 
Sbjct: 256 VRLLREM-VRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKEALIC 314

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF---SFSTLLAILPSC 378
            Y+   ++  +E  F  +  ++    W++ ISG+    L    Q     F   L     C
Sbjct: 315 TYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHSLPRSLQLLMRMFRQGLRPNDRC 374

Query: 379 -----NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
                +S +S+EFG+ +H   +K GF ++ +  +AL  MY    DL  ++ + + +    
Sbjct: 375 YASVFSSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERD 434

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           + S W  ++     +GH  EA + F+ M       PD VTL  ++SAC   E   +GK++
Sbjct: 435 EVS-WTAMVAGFASHGHSVEAFRLFRIMILD-GFKPDYVTLSAILSACDKPECLLKGKTI 492

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG  L+ + G  T + + L++MY +C++ ++A  +F++    +   ++ MIS +S N   
Sbjct: 493 HGHILR-VHGEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCS 551

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A+ LF+ +    F+ +     SILS C  +    +GK +HGH    G   +  +SS+L
Sbjct: 552 AEAMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSL 611

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           + +YS                      W+++I  Y  HG G +A+E+F  M   G++P  
Sbjct: 612 VKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDT 671

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
             ++S+LSACS +GLV+EG+ Y+ +M   Y V P   H+ C+VD+LGRSG+LQ+A  FI+
Sbjct: 672 VVLVSVLSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIE 731

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++P++    VW  + +AC  H D  +G  V E   + +  + G + +LSN+    G W++
Sbjct: 732 SMPMKADLMVWSTLFAACRVHNDAVLGGFV-ENKIREDGYDSGSFATLSNILANSGDWEE 790

Query: 776 AVEIGK 781
              + K
Sbjct: 791 VARVRK 796



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 182/725 (25%), Positives = 322/725 (44%), Gaps = 62/725 (8%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           FE +L  F +      V WN +I+  V N    + +  F +MV      +S T   ++SA
Sbjct: 120 FEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSA 179

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
                 L  GR VH L ++     D  +    VNMYAK GD+ ++   F  M   + VSW
Sbjct: 180 CAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSW 239

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
            T ++G +    P   +   REM  SG   +  + +S + A + +  +     +H + +K
Sbjct: 240 TTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMK 299

Query: 203 LG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEE 260
              Y D    +V  +LI  Y+  G IE +E AF  + T      W+  I G + +     
Sbjct: 300 KELYLDH---AVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVS-SHSLPR 355

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           +  LL  M   + + P+     ++ S   DS+    GR +H   I+    +D+L+ ++L 
Sbjct: 356 SLQLLMRM-FRQGLRPNDRCYASVFS-SMDSIEF--GRQLHSLVIKDGFVHDVLVGSALS 411

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             YS+ + L  +  +F  +    D VSW +M++G            LF+ M+    +  +
Sbjct: 412 TMYSRGDDLEDSYRVFKEMQE-RDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDY 470

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            TL AIL +C+ PE L  GK+IH   L++     +I  + L+ MY  C +   A  +   
Sbjct: 471 VTLSAILSACDKPECLLKGKTIHGHILRVHGEITSIS-HCLVSMYSKCQEAQTARRIFD- 528

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
            +   D   ++ +I   + NG   EA+  F+ M        D     +++S C ++    
Sbjct: 529 ATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLML-STGFQIDRFICSSILSLCADIARPL 587

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            GK LHG A+K+ +  D  V ++L+ +Y +  ++  +  VF+   + +L TW  +I  ++
Sbjct: 588 YGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYA 647

Query: 549 QNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q+ +   ALE+F     L  +P+ + +VS+LSAC++ G++  G           F+    
Sbjct: 648 QHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNY--------FESMRT 699

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLL 662
           I      ++  C        M+   G  G+  +A      M      P K+ ++   +L 
Sbjct: 700 IYGVEPMLHHYC-------CMVDLLGRSGRLQDAKSFIESM------PMKADLMVWSTLF 746

Query: 663 SACS-HSGLVDEGLQYYNNMLEE--YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +AC  H+  V  G  +  N + E  YD    +     + ++L  SG  +E     K++ +
Sbjct: 747 AACRVHNDAVLGG--FVENKIREDGYD----SGSFATLSNILANSGDWEEVARVRKSMDV 800

Query: 720 QPKPG 724
           + +PG
Sbjct: 801 KKEPG 805



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 265/552 (48%), Gaps = 28/552 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TS++  Y+      +++  F+    ++VV+W   I   V+    V  +    EMV  G+ 
Sbjct: 209 TSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVS 268

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+ A +QM  +++   +H + +K  +  D ++    +  YA  G +  SE  
Sbjct: 269 MNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETA 328

Query: 131 FSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           F  +   + T  W+T +SG   ++ P    L  R M   G + ++   +S  ++   +  
Sbjct: 329 FEEVGTVSSTRIWSTFISGVSSHSLPRSLQLLMR-MFRQGLRPNDRCYASVFSS---MDS 384

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + +G+ +H+L IK G+     V V ++L +MYS+  D+E + R F  M  +D VSW A++
Sbjct: 385 IEFGRQLHSLVIKDGFVHD--VLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMV 442

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GFA +G   EAF L   M ++   +PD  T+  ++S C     L +G+++HG+ I R+ 
Sbjct: 443 AGFASHGHSVEAFRLFRIM-ILDGFKPDYVTLSAILSACDKPECLLKGKTIHGH-ILRVH 500

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G    + + L+  YSK      A  +F+A  P  D V ++SMISG            LF+
Sbjct: 501 GEITSISHCLVSMYSKCQEAQTARRIFDA-TPCKDQVMFSSMISGYSTNGCSAEAMSLFQ 559

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            ML    Q       +IL  C       +GK +H   +K G  ++    ++L+ +Y   G
Sbjct: 560 LMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSG 619

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  +  +   I+ + D   W  +I    Q+G  ++A++ F  M       PD+V LV+V
Sbjct: 620 NLNDSRKVFDEIT-SPDLVTWTAIIDGYAQHGSGRDALEMFDLMI-TLGVKPDTVVLVSV 677

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YN 534
           +SAC    L  EG + +  +++++ G++  + +   ++ + GR   ++ A +  ES    
Sbjct: 678 LSACSRNGLVEEGVN-YFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMK 736

Query: 535 CNLCTWNCMISA 546
            +L  W+ + +A
Sbjct: 737 ADLMVWSTLFAA 748



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 185/356 (51%), Gaps = 9/356 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   ++L T YS     E S  +F E   +D V+W AM+     +   V     F
Sbjct: 399 GFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLF 458

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAK 120
             M+ +G + D  TL  I+SA  +  CL +G+ +H   ++  G I   S C   V+MY+K
Sbjct: 459 RIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSISHC--LVSMYSK 516

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C +  ++   F    C D V +++++SG   N    + +  F+ M  +G Q D    SS 
Sbjct: 517 CQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSI 576

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +    YGK++H   IK G      +SV++SL+ +YS+ G++  + + F  +T  
Sbjct: 577 LSLCADIARPLYGKLLHGHAIKAGILSD--LSVSSSLVKLYSKSGNLNDSRKVFDEITSP 634

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W AIIDG+A +G   +A ++  ++ +   V+PD   +V+++S C+ + L+ EG + 
Sbjct: 635 DLVTWTAIIDGYAQHGSGRDALEMF-DLMITLGVKPDTVVLVSVLSACSRNGLVEEGVN- 692

Query: 301 HGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +  ++R + G + ++ +   ++D   +S  L  A+    ++    DL+ W+++ + 
Sbjct: 693 YFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAA 748



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L++ YS     +++  +F  T  KD V +++MI+    N C    +  F  M+  G + D
Sbjct: 510 LVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQID 569

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                 I+S    +     G+++H  +IKAG+++D S+ +  V +Y+K G+LN S   F 
Sbjct: 570 RFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFD 629

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   D V+W  I+ G   +      L  F  M   G + D V L S ++A +  G +  
Sbjct: 630 EITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEE 689

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW------ 245
           G V +   ++  Y   P +     ++ +  + G ++ A+     M  K D++ W      
Sbjct: 690 G-VNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAA 748

Query: 246 -----NAIIDGFALNGKFEEAFD 263
                +A++ GF  N   E+ +D
Sbjct: 749 CRVHNDAVLGGFVENKIREDGYD 771


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 192/588 (32%), Positives = 311/588 (52%), Gaps = 36/588 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           +S    L   +   G +    + F  ++  D+  +N +I GF+ NG  + +  L   ++ 
Sbjct: 46  LSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRK 105

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
             ++ PD  T    IS  +     R G  +H ++I   +  +L + ++++D Y K     
Sbjct: 106 XTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAE 165

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ + P  D V WN+MISG            +F +ML +   F  +TL  +L + 
Sbjct: 166 LARKVFD-VMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              +    G  I C   K G  ++   +  L+ +Y  CG       L  +I    D   +
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ-PDLISY 283

Query: 439 NIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
           N +I   T N   + A+  F+ +  + Q+  S   V L+ V     +L+L+   + +  L
Sbjct: 284 NAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS---RLIQNL 340

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           +LK  + L   V  AL T+Y R  +++ A  +F+     +L +WN MIS ++QN    RA
Sbjct: 341 SLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRA 400

Query: 557 LELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           + LF+ +  +  PN +++ SILSAC QLG L  GK +HG +     + N ++S+AL+DMY
Sbjct: 401 ISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               K+   W++MI+ YG HG G EA++LF+EM  SGI PT  + +
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L ACSHSGLV EG + +++M   Y  +P +EH+ C+VD+LGR+G+L  A EFI+ +P+
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +P P VWGA+L AC  H +T+M    ++ LF+L+PENVGYY+ LSN+Y
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIY 628



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 18/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  ++L   ++++  Y   +  E +  +F     +D V WN MI+    N      +  F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ G+ FDSTTL  +++A+ ++   + G  + CL+ K G+ +D  +    +++Y+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G        F  +   D +S+N ++SG   N+  E  +  FRE+  SG++ ++ +L   +
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L   ++I  L +K+G    P  SV+ +L ++Y +  +++ A + F     K 
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQP--SVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + SWNA+I G+  NG  + A  L  EM  M  + P+  TV +++S CA    L  G+ VH
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G      L  ++ +  +L+D Y+K  S+ +A  LF+ +   N +V+WN+MI+G       
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN-VVTWNAMITGYGLHGHG 497

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
                LF EML      +  T L+IL +C+    +  G  I H      GF   +     
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G L  A   ++R+      + W  ++ AC
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 21/483 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMN 87
           LF +    D+  +N +I    +N      +  +  + +   +R D+ T    +SA +++ 
Sbjct: 68  LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLE 127

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
             + G ++H  SI  G+ ++  + +  V++Y K      +   F  M   DTV WNT++S
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N+Y E  +  F +M   G   D+ +L++ + A A L E   G  I  L  K G   
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHS 247

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             Y  V   LIS+YS+CG        F  +   D++S+NA+I G+  N + E A  L  E
Sbjct: 248 DVY--VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           + L      + +T+V LI +      L+  R +   +++  +     +  +L   Y + N
Sbjct: 306 L-LASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A  LF+  +P   L SWN+MISG            LF+EM+   S  +  T+ +IL
Sbjct: 365 EVQFARQLFDE-SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSP-NPVTVTSIL 422

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    +L  GK +H         +N     AL+ MY  CG +V A  L   +  + + 
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV-DKNV 481

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-H 494
             WN +I     +GH +EA+K F  M  Q    P  VT ++++ AC +  L  EG  + H
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEML-QSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 495 GLA 497
            +A
Sbjct: 541 SMA 543


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 221/767 (28%), Positives = 366/767 (47%), Gaps = 102/767 (13%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I+    ++  L+ G  VH   +  G+     L +  + +Y + G +  +   F  M   +
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 139 TVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
             SW  IM   C   +Y E   L++  M   G + D+        A + L     GK ++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYL-MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + +G+E +    V  S++ M+ +CG ++ A R F  +  KDV  WN ++ G+   G+
Sbjct: 214 DYMLSIGFEGNS--CVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F++A   + +M+L   V+PD  T   +IS  A S    E                 L M 
Sbjct: 272 FKKALKCISDMKL-SGVKPDQVTWNAIISGYAQSGQFEEASKY------------FLEMG 318

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
            L DF  K N                 +VSW ++I+G            +F++M+    +
Sbjct: 319 GLKDF--KPN-----------------VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINC-------- 416
            +  T+ + + +C +   L  G+ IH + +K+   ++ + V N+L+  Y  C        
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 417 -------GDLVAAFSLLQ----RISHNS---------------DTSCWNIVIVACTQNGH 450
                   DLV+  ++L     R SH                 D   WN ++   TQ G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            + A++ F+ M       P++ T+   ++ACG +     GK +HG  L++ + L T V +
Sbjct: 480 GKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGS 538

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EP 567
           ALI+MY  C  ++ A +VF      ++  WN +ISA +Q+   V AL+L R +     E 
Sbjct: 539 ALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 598

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           N +++VS L AC++L  LR GK+IH  +   G    +FI ++L+DMY  C          
Sbjct: 599 NTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF 658

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                +   +W+ MIS YG HG G +A+ LF      G++P   +  +LLSACSHSGL++
Sbjct: 659 DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIE 718

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EG +Y+  M  EY + P  E + C+VD+L R+G+  E  EFI+ +P +P   VWG++L A
Sbjct: 719 EGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           C  H +  + +  A  LF+LEP++ G Y+ ++N+Y A GRW+DA +I
Sbjct: 779 CRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKI 825



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 197/783 (25%), Positives = 336/783 (42%), Gaps = 140/783 (17%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG----LHFFGEMVE 66
           + LL  Y      E +  +F +   ++V +W    TA +E  C +      +  F  MV 
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSW----TAIMEMYCGLGDYEETIKLFYLMVN 183

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+R D      +  A +++   + G+ V+   +  G   +S +    ++M+ KCG ++ 
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D   WN ++SG       +K L    +M  SG + D V+          
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW--------- 294

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKD---- 241
                                       N++IS Y+Q G  E A + F  M   KD    
Sbjct: 295 ----------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPN 326

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW A+I G   NG   EA  +  +M ++  V+P+  T+ + +S C +  LLR GR +H
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIH 385

Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           GY I+   L  DLL+ NSL+D+Y+K  S+  A   F  I    DLVSWN+M++G      
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK-QTDLVSWNAMLAGYALRGS 444

Query: 356 FKEMLYLCSQFSF------------------------------------------STLLA 373
            +E + L S+  F                                          +T+  
Sbjct: 445 HEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
            L +C    +L+ GK IH + L+     +T   +AL+ MY  C  L  A S+   +S   
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS-TR 563

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN +I AC Q+G    A+   + M    N   ++VT+V+ + AC  L    +GK +
Sbjct: 564 DVVVWNSIISACAQSGRSVNALDLLREMN-LSNVEVNTVTMVSALPACSKLAALRQGKEI 622

Query: 494 HGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           H   ++   GLDT   + N+LI MYGRC  I+ +  +F+     +L +WN MIS +  + 
Sbjct: 623 HQFIIRC--GLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 680

Query: 552 AEVRALEL---FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             + A+ L   FR +  +PN I+  ++LSAC+  G++  G +      +    +  +   
Sbjct: 681 FGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWK------YFKMMKTEYAMD 734

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-- 666
             ++ Y         + M+      G+  E +E   +M      P  +   SLL AC   
Sbjct: 735 PAVEQY---------ACMVDLLSRAGQFNETLEFIEKM---PFEPNAAVWGSLLGACRIH 782

Query: 667 -HSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAYE---FIKNLPIQP 721
            +  L +   +Y       +++ P++  ++V + ++   +G+ ++A +    +K   +  
Sbjct: 783 CNPDLAEYAARYL------FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTK 836

Query: 722 KPG 724
            PG
Sbjct: 837 PPG 839



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 238/533 (44%), Gaps = 57/533 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYE-----TCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           T  ++++ Y+    FE +   F E         +VV+W A+I    +N      L  F +
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCG 122
           MV EG++ +S T+   VSA T ++ L+ GR +H   IK   + +D  + N  V+ YAKC 
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +   F  +   D VSWN +++G       E+ +    EM + G + D ++ +  V 
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472

Query: 183 ASACLGE----LSYGKVIHALG--------------------IKLGYEDSPYV------- 211
                G+    L + + +H++G                    +KLG E   YV       
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532

Query: 212 --SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              V ++LISMYS C  +E A   F  ++ +DVV WN+II   A +G+   A DLL EM 
Sbjct: 533 STGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 592

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           L  +VE +  T+V+ +  C+    LR+G+ +H + IR  L     ++NSL+D Y +  S+
Sbjct: 593 L-SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSI 651

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPS 377
            K+  +F+ + P  DLVSWN MIS             LF+    +  + +  T   +L +
Sbjct: 652 QKSRRIFD-LMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSA 710

Query: 378 CNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           C+    +E G K     + +            ++ +    G        ++++    + +
Sbjct: 711 CSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAA 770

Query: 437 CWNIVIVACTQ--NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            W  ++ AC    N    E    +    + Q +S + V + N+ SA G  E A
Sbjct: 771 VWGSLLGACRIHCNPDLAEYAARYLFELEPQ-SSGNYVLMANIYSAAGRWEDA 822



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 30/233 (12%)

Query: 567 PNE-ISI-VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNA- 621
           P+E I I  SIL  C +L  LR G Q+H  +   G     F+ S LL++Y  + C  +A 
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 622 ------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                       +W++++  Y   G   E I+LF+ M N G+RP       +  ACS   
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 204

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVC----IVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
               G   Y+ ML         E + C    I+DM  + G++  A  F + +  +    +
Sbjct: 205 NYRVGKDVYDYMLS-----IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK-DVFM 258

Query: 726 WGAMLSACSHHGDTKMG-KQVAEL-LFKLEPENVGYYISLSNMYVALGRWKDA 776
           W  M+S  +  G+ K   K ++++ L  ++P+ V +   +S  Y   G++++A
Sbjct: 259 WNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEEA 310


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 209/716 (29%), Positives = 365/716 (50%), Gaps = 38/716 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G  +H L+ +AG++ +  +    +++Y   G + +++  F  M   + VSW  IM     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   E+ L+ +R M   G   +  +L++ V+    L +   G  + A  +  G     +V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGL--LTHV 180

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           SV NSLI+M+     ++ AER F  M  +D +SWNA+I  ++    + + F +L +M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR-H 239

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V+PD+ T+ +L+S+CA S L+  G  +H   +   L   + ++N+L++ YS +  L +
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF--------SFSTLLAILPSC 378
           AE LF  ++   D++SWN+MIS   +     E L    Q         +  T  + L +C
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +SPE+L  G++IH   L+    N  +  N+L+ MY  C  +     + + +      SC 
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC- 417

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHGLA 497
           N++            A++ F  M +     P+ +T++N+   C +L +L   G  LH   
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWM-RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            ++ +  D  + N+LITMY  C D++S++ +F    N ++ +WN +I+A  ++     A+
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 558 ELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LF   +   N++    +   LS+   L  L  G Q+HG     G   +S + +A +DMY
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
             C               +    W+++IS Y  +G   EA + F  M + G +P   + +
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +LLSACSH+GL+D+G+ YYN+M   + V P  +H VCIVD+LGR GK  EA +FI  +P+
Sbjct: 657 ALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV 716

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            P   +W ++LS+   H +  +G++ A+ L +L+P +   Y+ LSN+Y    RW D
Sbjct: 717 LPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVD 772



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 295/604 (48%), Gaps = 23/604 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +     ++  LF+E   ++VV+W A++ A   N C+   L  +
Sbjct: 74  GLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAY 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +EG+  ++  L  +VS    +     G  V    + +G++   S+ N  + M+   
Sbjct: 134 RRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNL 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +E  F  M   D +SWN ++S   H     KC +   +M     + D  +L S V
Sbjct: 194 RRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLV 253

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A    ++ G  IH+L +  G   S  V + N+L++MYS  G ++ AE  F  M+ +D
Sbjct: 254 SVCASSDLVALGSGIHSLCVSSGLHCS--VPLINALVNMYSTAGKLDEAESLFRNMSRRD 311

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I  +  +    EA + L ++       P+  T  + +  C+    L  GR++H
Sbjct: 312 VISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIH 371

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++R L   LL+ NSL+  YSK NS+   E +F ++ P  D+VS N +  G       
Sbjct: 372 AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM-PCYDVVSCNVLTGGYAALEDV 430

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGVNA 408
                +F  M     + ++ T++ +  +C S   L  +G  +H +  + G  ++    N+
Sbjct: 431 ANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNS 490

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGDL ++  +  RI++ S  S WN +I A  ++G  +EAIK F   +Q     
Sbjct: 491 LITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHGRGEEAIKLFMD-SQHAGNK 548

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-ST 527
            D   L   +S+  NL    EG  LHGL++K+ +  D+ V NA + MYG+C  +     T
Sbjct: 549 LDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKT 608

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           + +  +    C WN +IS +++      A + F+H+     +P+ ++ V++LSAC+  G+
Sbjct: 609 LPDPAHRPTQC-WNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGL 667

Query: 585 LRHG 588
           +  G
Sbjct: 668 IDKG 671



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 171/664 (25%), Positives = 302/664 (45%), Gaps = 51/664 (7%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG---ELSYGKVIH 197
           SW T +SGC             R M          +L+S V A    G     + G  IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           AL  + G   + Y+    +L+ +Y   G +  A+R FW M  ++VVSW AI+   + NG 
Sbjct: 68  ALTHRAGLMGNVYIGT--ALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA      M+    V  +   + T++SLC        G  V  + +   L   + + N
Sbjct: 126 MEEALVAYRRMR-KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY-----LCSQF------ 366
           SL+  +     +  AE LF+ +    D +SWN+MIS    E +Y     + S        
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 367 -SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
              +TL +++  C S + +  G  IH   +  G   +   +NAL++MY   G L  A SL
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            + +S   D   WN +I +  Q+    EA++T   + Q     P+S+T  + + AC + E
Sbjct: 304 FRNMSRR-DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES--CYN---CNLCTW 540
               G+++H + L+  +     + N+L+TMY +C  ++    VFES  CY+   CN+ T 
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR-HGKQIHGHVFHLG 599
               +A       +R     R    +PN I+++++   C  LG L  +G  +H +V   G
Sbjct: 423 G--YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
              + +I+++L+ MY+ C               KS  +W+++I+A   HG+G EAI+LF 
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFM 540

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLG 702
           +  ++G +  +  +   LS+ ++   ++EG+Q +   ++      + + HV    +DM G
Sbjct: 541 DSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN---GLDCDSHVVNATMDMYG 597

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL--EPENVGYY 760
           + GK+    + + + P       W  ++S  + +G  K  +   + +  +  +P+ V + 
Sbjct: 598 KCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 761 ISLS 764
             LS
Sbjct: 657 ALLS 660



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 26/320 (8%)

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGK 491
           +S W   +  C + G    A    + M ++++       L ++++AC   G  E A  G 
Sbjct: 6   SSSWYTAVSGCARCGLESTAFTLLRVM-RERDVPLSGFALASLVTACEHRGWQEGAACGA 64

Query: 492 SLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           ++H L  ++ LMG +  +  AL+ +YG    + +A  +F      N+ +W  ++ A S N
Sbjct: 65  AIHALTHRAGLMG-NVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSN 123

Query: 551 KAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL  +R +  E    N  ++ +++S C  L     G Q+  HV   G   +  ++
Sbjct: 124 GCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           ++L+ M+ N                +   +W++MIS Y +     +   +  +M +  ++
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P  +++ SL+S C+ S LV  G   + ++     +         +V+M   +GKL EA  
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 713 FIKNLPIQPKPGVWGAMLSA 732
             +N+  +     W  M+S+
Sbjct: 303 LFRNMSRRDVIS-WNTMISS 321


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 219/707 (30%), Positives = 346/707 (48%), Gaps = 67/707 (9%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGE 189
           F  +    TV WNTI+ G + NN P   LL++  M  S   + D+ + SS + A A    
Sbjct: 60  FDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARS 119

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-------------GDIEAAERAFWG 236
           L  GK +H   ++  +  S  V   NSL++MYS C              + +   R F  
Sbjct: 120 LKLGKALHCHVLRSHFGSSRIV--YNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  ++VV+WN +I  +    +  EAF +   M  M  + P   + V +            
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRM-GIRPTPVSFVNVFPAVWRMNDYDN 236

Query: 297 GRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              ++G  ++    Y  D  +++S +  Y++   +  A  +F+     N  V WN+MI G
Sbjct: 237 ANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV-WNTMIGG 295

Query: 355 ------------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                       LF +++    QF     T L+ L + +  + L+ G+ +H + LK    
Sbjct: 296 YVQNNCPIEAIDLFVQVME-SEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTI 354

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
              + +NA++ MY  CG +  +F +   +    D   WN ++ A  QNG   E +     
Sbjct: 355 LQVVILNAIIVMYSRCGSIGTSFKVFSNMLER-DVVTWNTMVSAFVQNGLDDEGLMLVFE 413

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK---SLMGLDTRVQNALITMYG 517
           M Q+Q    DSVTL  ++S   NL     GK  H   ++      G+D      LI MY 
Sbjct: 414 M-QKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD----GYLIDMYA 468

Query: 518 RCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISI 572
           +   I +A  +FE  S Y+ +  TWN MI+ ++QN        +FR +      PN +++
Sbjct: 469 KSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            SIL AC  +G +  GKQIHG        +N F+ +ALLDMYS                 
Sbjct: 529 ASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLE 588

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K++  +++MI +YG HG G  A+ LFH M  SGI+P   + +++LSACS++GLVDEGL+ 
Sbjct: 589 KNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWGAMLSACSHH 736
           + +M  EY ++P +EH+ C+ DMLGR G++ EAYEF+K L  +     +WG++L AC  H
Sbjct: 649 FQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIH 708

Query: 737 GDTKMGKQVAELLFKLEPEN--VGYYISLSNMYVALGRWKDAVEIGK 781
           G+ ++GK VA  L ++E  +   GY++ LSN+Y A G W +   + K
Sbjct: 709 GEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRK 755



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 190/712 (26%), Positives = 315/712 (44%), Gaps = 54/712 (7%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIVSALT 84
           +L LF        V WN +I   + N   +  L F+  M      +FDS T    + A  
Sbjct: 56  ALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACA 115

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC----------GDLNSSECT---F 131
           Q   LK G+ +HC  +++   +   + N  +NMY+ C           D N+ +     F
Sbjct: 116 QARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVF 175

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + V+WNT++S  +      +    FR M   G +   VS  +   A   + +  
Sbjct: 176 DTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYD 235

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
              V++ L +KLG +      V +S I MY++ G ++ A   F     ++   WN +I G
Sbjct: 236 NANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGG 295

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGYAIRRLL 309
           +  N    EA DL   +Q+M S +  +  V  L +L A S L  L  GR +H Y ++   
Sbjct: 296 YVQNNCPIEAIDLF--VQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSST 353

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
              ++++N+++  YS+  S+  +  +F+ +    D+V+WN+M+S     GL  E L L  
Sbjct: 354 ILQVVILNAIIVMYSRCGSIGTSFKVFSNMLE-RDVVTWNTMVSAFVQNGLDDEGLMLVF 412

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           TL A+L   ++  S E GK  H + ++ G     +    L+ MY   G
Sbjct: 413 EMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMD-GYLIDMYAKSG 471

Query: 418 DLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
            +  A  L ++ S ++ D + WN +I   TQNG  +E    F+ M  +QN  P++VTL +
Sbjct: 472 LITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMI-EQNVRPNAVTLAS 530

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC  +     GK +HG A++  +  +  V  AL+ MY +   I  A  VF      N
Sbjct: 531 ILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKN 590

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
             T+  MI ++ Q+    RAL LF  +     +P+ ++ V+ILSAC+  G++  G +I  
Sbjct: 591 SVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI-- 648

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
                 FQ       ++   Y    S+  +  +    G  G+  EA E    +   G   
Sbjct: 649 ------FQ-------SMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEG--N 693

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           T     SLL AC   G  + G    N +LE       T +HV + ++    G
Sbjct: 694 TFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEG 745



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 225/468 (48%), Gaps = 25/468 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++   WN MI   V+N C +  +  F +++E E    D  T L  ++A++Q+  L  GR 
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K+  I    + N  + MY++CG + +S   FS M   D V+WNT++S  + N  
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            ++ L+   EM   G   D+V+L++ ++ ++ L     GK  HA  I+ G +   +  + 
Sbjct: 404 DDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ---FEGMD 460

Query: 215 NSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
             LI MY++ G I  A++ F   +   +D  +WNA+I G+  NG  EE F +  +M + +
Sbjct: 461 GYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKM-IEQ 519

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           +V P+  T+ +++  C     +  G+ +HG+AIR  L  ++ +  +L+D YSKS +++ A
Sbjct: 520 NVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYA 579

Query: 333 ELLFNAIAPMNDLVSWNSMI------------SGLFKEMLYLCSQFSFSTLLAILPSCNS 380
           E +F      N  V++ +MI              LF  ML    +    T +AIL +C+ 
Sbjct: 580 ENVFAETLEKNS-VTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSY 638

Query: 381 PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCW 438
              ++ G  I    + +     ++     +  M    G +  A+  ++ +    +T   W
Sbjct: 639 AGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIW 698

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACGN 483
             ++ AC  +G F+        + + +  S  +   V L N+ +A GN
Sbjct: 699 GSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGN 746


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 218/747 (29%), Positives = 372/747 (49%), Gaps = 46/747 (6%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D   L+ +   +T +  L      H +++  G   +  +    +++Y       SS 
Sbjct: 7   LKLDHGELISLSKRITTLQSLLP---FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSS 63

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   DT  WN+ +      +   + L ++  M       ++ +     ++ A   
Sbjct: 64  TLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFM 123

Query: 189 ELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            +  G  +HAL  K+G+  E+S   +V +S +S+YS+C ++  A + F  +  +DVV+W 
Sbjct: 124 MIRSGMNLHALACKVGFFPENS---AVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWT 180

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           A++ G+  NG+ E   + + EM  +   S +P+  T+      C +   L  GR +HG  
Sbjct: 181 ALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLV 240

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-EMLYLC 363
           ++  +G  L + +S++  Y K     +A   F+ +    DL+SW SMI    +  M+  C
Sbjct: 241 VKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVIN-KDLLSWTSMIRVYARFGMMSDC 299

Query: 364 SQFSFSTLL-----------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            +F +  L             IL    +   +  GK+ H   ++  ++ + +  N+L+ M
Sbjct: 300 VRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSM 359

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G L  A  L QR         WN +IV   + G   + I+ F+ M Q      +SV
Sbjct: 360 YCKFGMLSFAERLFQR--SQGSIEYWNFMIVGYGRIGKNVKCIQLFREM-QYLGIRSESV 416

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            +V+ I++CG L     G+S+H   +K  +     V N+LI MYG+C  +  +  +F   
Sbjct: 417 GIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRS 476

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              ++  WN +ISA    K    A+ LF  +  E   PN  ++V +LSAC+ L  L  G+
Sbjct: 477 ER-DVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGE 535

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           ++H ++   GF+ N  + +AL+DMY+ C               K    W++MIS YG +G
Sbjct: 536 RLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNG 595

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
               AIE+F+ M  S ++P + + +SLLSAC+H+GLV+EG   +  M + Y V+P  +H+
Sbjct: 596 YAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHY 654

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGRS  L+EA E + ++PI P  GVWGA+LSAC  H   +MG ++ +     EP
Sbjct: 655 TCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEP 714

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
           EN GYYI ++NMY ++GRW +A  + +
Sbjct: 715 ENDGYYIMVANMYSSIGRWDEAENVRR 741



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 197/722 (27%), Positives = 338/722 (46%), Gaps = 52/722 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +  L++ Y  +++  SS  LF+    KD   WN+ +            L F+  M  E +
Sbjct: 46  AAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENV 105

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD-SSLCNVFVNMYAKCGDLNSSE 128
             +  T  ++ S+      ++ G  +H L+ K G   + S++ + FV++Y++C ++N + 
Sbjct: 106 LPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAV 165

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPE---KCLLYFREMGWSGEQADNVSLSSAVAASA 185
             F  +   D V+W  ++ G + N   E   +C+     +G   ++ +  +L     A  
Sbjct: 166 KVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACG 225

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            LG+L  G+ +H L +K G      + + +S++SMY +CG    A ++F  +  KD++SW
Sbjct: 226 NLGDLVSGRCLHGLVVKNGI--GCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSW 283

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            ++I  +A  G   +      EM L   V PD   +  ++S   +S+ +  G++ HG  I
Sbjct: 284 TSMIRVYARFGMMSDCVRFFWEM-LENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLII 342

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           RR    D ++ NSL+  Y K   LS AE LF        +  WN MI G           
Sbjct: 343 RRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ--RSQGSIEYWNFMIVGYGRIGKNVKCI 400

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHM 412
            LF+EM YL  +     +++ + SC     +  G+SIHC  +K GF + TI V N+L+ M
Sbjct: 401 QLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIK-GFVDETISVTNSLIEM 459

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  C  +  ++ +  R     D   WN +I A     H++EAI  F  M   ++ +P++ 
Sbjct: 460 YGKCDKMNVSWRIFNR--SERDVILWNALISAHIHVKHYEEAISLFDIMI-MEDQNPNTA 516

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV V+SAC +L    +G+ LH    +    L+  +  AL+ MY +C  ++ +  VF+S 
Sbjct: 517 TLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSM 576

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
              ++  WN MIS +  N     A+E+F  +E    +PNEI+ +S+LSAC   G++  GK
Sbjct: 577 MEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGK 636

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            +                 A +  YS   +   ++ M+   G      EA EL   M   
Sbjct: 637 NVF----------------AKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSM--- 677

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQ 708
            I P      +LLSAC     ++ G++   N +   D  PE + +++ + +M    G+  
Sbjct: 678 PIPPDGGVWGALLSACKTHNQIEMGIRIGKNAI---DSEPENDGYYIMVANMYSSIGRWD 734

Query: 709 EA 710
           EA
Sbjct: 735 EA 736



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 226/494 (45%), Gaps = 19/494 (3%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   +S+L+ Y        +   F E  NKD+++W +MI        +   + FF EM+E
Sbjct: 249 LDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLE 308

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
             +  D   +  I+S       +  G+  H L I+     D  + N  ++MY K G L+ 
Sbjct: 309 NQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSF 368

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +E  F          WN ++ G        KC+  FREM + G ++++V + SA+A+   
Sbjct: 369 AERLFQRSQ-GSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQ 427

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LGE++ G+ IH   IK G+ D   +SVTNSLI MY +C  +  + R F   + +DV+ WN
Sbjct: 428 LGEINLGRSIHCNVIK-GFVDET-ISVTNSLIEMYGKCDKMNVSWRIF-NRSERDVILWN 484

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I        +EEA  L  ++ +M    P+ AT+V ++S C+    L +G  +H Y   
Sbjct: 485 ALISAHIHVKHYEEAISLF-DIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINE 543

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           +    +L +  +L+D Y+K   L K+  +F+++    D++ WN+MISG            
Sbjct: 544 KGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMME-KDVICWNAMISGYGMNGYAESAIE 602

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +F  M     + +  T L++L +C     +E GK++           N      ++ +  
Sbjct: 603 IFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLG 662

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
              +L  A  L+  +    D   W  ++ AC  +   +  I+  K+    +  +     +
Sbjct: 663 RSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIM 722

Query: 475 V-NVISACGNLELA 487
           V N+ S+ G  + A
Sbjct: 723 VANMYSSIGRWDEA 736



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 1   RGFLAH-LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF+   +  + SL+  Y        S  +F  +  +DV+ WNA+I+A +  +     + 
Sbjct: 443 KGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRS-ERDVILWNALISAHIHVKHYEEAIS 501

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M+ E    ++ TL++++SA + +  L++G  +H    + G   +  L    V+MYA
Sbjct: 502 LFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYA 561

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L  S   F  M   D + WN ++SG   N Y E  +  F  M  S  + + ++  S
Sbjct: 562 KCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLS 621

Query: 180 AVAASACLGELSYGKVIHALGIKL-GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            ++A A  G +  GK + A   K+  Y   P +     ++ +  +  ++E AE     M 
Sbjct: 622 LLSACAHAGLVEEGKNVFA---KMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMP 678

Query: 239 C-KDVVSWNAIIDGFALNGKFE 259
              D   W A++     + + E
Sbjct: 679 IPPDGGVWGALLSACKTHNQIE 700


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/651 (29%), Positives = 326/651 (50%), Gaps = 46/651 (7%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           +A+N + +  +   A    L  G+ IH+L +K        + + N ++SMY+ C     A
Sbjct: 40  RAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLI-LGNHIVSMYAHCDSPGDA 98

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
           + AF  +  +++ SW  ++  FA++G+ +E    L  M+    V PD  T +T +  C D
Sbjct: 99  KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR-QDGVRPDAVTFITALGSCGD 157

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              LR+G  +H   +   L  D  + N+L++ Y K  SLS A+ +F  +    +++SW+ 
Sbjct: 158 PESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSI 217

Query: 351 MISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           M                F+ ML L  + + S ++ IL +C+SP  ++ G+ IH      G
Sbjct: 218 MAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSG 277

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKT 457
           F +  +  NA+M MY  CG +  A  +   +     D   WNI++ A   N   ++AI+ 
Sbjct: 278 FESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQL 337

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           ++ M  +     D VT V+++SAC + E    G+ LH   +   +  +  V NAL++MY 
Sbjct: 338 YQRMQLR----ADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH-LEFE---------P 567
           +C     A  VF+     ++ +W  +ISA+ + +    A  LF+  LE E         P
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           + ++ V+IL+AC  +  L  GK +       G   +  + +A++++Y  C          
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                      W++MI+ Y   G+  EA++LF  M   G+RP   S +S+L ACSH+GL 
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573

Query: 672 DEGLQYYNNMLEEY-DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           D+G  Y+ +M  EY +V    +H  C+ D+LGR G+L+EA EF++ LP++P    W ++L
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +AC +H D K  K+VA  L +LEP     Y++LSN+Y  L +W    ++ K
Sbjct: 634 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRK 684



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 158/643 (24%), Positives = 299/643 (46%), Gaps = 43/643 (6%)

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKC 121
           ++ ++ +R ++ T   ++    +   L +GR +H L++K  ++  +  L N  V+MYA C
Sbjct: 33  DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                ++  F  +   +  SW  +++    +   ++ L     M   G + D V+  +A+
Sbjct: 93  DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCK 240
            +      L  G  IH + +    E  P VS  N+L++MY +CG +  A+R F  M   +
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVS--NALLNMYKKCGSLSHAKRVFAKMERTR 210

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW+ +    AL+G   EA      M L+  ++   + +VT++S C+   L+++GR +
Sbjct: 211 NVISWSIMAGAHALHGNVWEALRHFRFMLLL-GIKATKSAMVTILSACSSPALVQDGRLI 269

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISGLF--- 356
           H          +LL+ N++M  Y +  ++ +A  +F+A+   + D+VSWN M+S      
Sbjct: 270 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND 329

Query: 357 --KEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
             K+ + L  +        T +++L +C+S E +  G+ +H   +      N I  NAL+
Sbjct: 330 RGKDAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV 389

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ------Q 464
            MY  CG    A ++  ++   S  S W  +I A  +     EA   F+ M +       
Sbjct: 390 SMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 448

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           Q   PD++  V +++AC ++    +GK +   A    +  D  V  A++ +YG+C +I+ 
Sbjct: 449 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 508

Query: 525 ASTVFES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACT 580
              +F+  C   ++  WN MI+ ++Q      AL+LF  +E E   P+  S VSIL AC+
Sbjct: 509 GRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS 568

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
             G+   GK              S+ +S   +  +  ++   +  +    G  G+  EA 
Sbjct: 569 HTGLEDQGK--------------SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAE 614

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           E   ++    ++P   +  SLL+AC +   +    +  N +L 
Sbjct: 615 EFLEKL---PVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR 654



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/610 (24%), Positives = 275/610 (45%), Gaps = 63/610 (10%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +++ Y++      + A F     +++ +W  ++ A   +      L     M ++G+R D
Sbjct: 85  IVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 144

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + T +  + +      L+ G  +H + + + +  D  + N  +NMY KCG L+ ++  F+
Sbjct: 145 AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 204

Query: 133 GM-HCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            M    + +SW +IM+G   LH N  E  L +FR M   G +A   ++ + ++A +    
Sbjct: 205 KMERTRNVISW-SIMAGAHALHGNVWE-ALRHFRFMLLLGIKATKSAMVTILSACSSPAL 262

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--TCKDVVSWNA 247
           +  G++IH+     G+E    + V N++++MY +CG +E A + F  M    +DVVSWN 
Sbjct: 263 VQDGRLIHSCIALSGFESE--LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 320

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  +  N + ++A  L   MQL      D  T V+L+S C+ +  +  GR +H   +  
Sbjct: 321 MLSAYVHNDRGKDAIQLYQRMQL----RADKVTYVSLLSACSSAEDVGLGRVLHKQIVND 376

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  ++++ N+L+  Y+K  S ++A  +F+ +     ++SW ++IS             L
Sbjct: 377 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHL 435

Query: 356 FKEMLYL----CSQFSFSTLLA---ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
           F++ML L     SQ      LA   IL +C    +LE GK +       G S++     A
Sbjct: 436 FQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTA 495

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++++Y  CG++     +   +    D   WN +I    Q G   EA+K F  M + +   
Sbjct: 496 VVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM-EMEGVR 554

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PDS + V+++ AC +  L  +GKS           + T  +N   T+             
Sbjct: 555 PDSFSFVSILLACSHTGLEDQGKSY-------FTSMTTEYRNVTRTIQ------------ 595

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                      + C+     +      A E    L  +P+ ++  S+L+AC     L+  
Sbjct: 596 ----------HFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRA 645

Query: 589 KQIHGHVFHL 598
           K++   +  L
Sbjct: 646 KEVANKLLRL 655



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 175/389 (44%), Gaps = 18/389 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF + L  + +++T Y      E +  +F   +   +DVV+WN M++A V N      + 
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +  M    +R D  T + ++SA +    +  GRV+H   +   +  +  + N  V+MYA
Sbjct: 337 LYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-YPEKCLLYFR--EMGWSGE----QA 172
           KCG    +   F  M     +SW TI+S  +      E C L+ +  E+  +G     + 
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D ++  + + A A +  L  GK++       G   S   +V  +++++Y +CG+IE   R
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGL--SSDKAVGTAVVNLYGKCGEIEEGRR 511

Query: 233 AFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            F G+  + DV  WNA+I  +A  G+  EA  L   M+ M  V PD  + V+++  C+ +
Sbjct: 512 IFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME-MEGVRPDSFSFVSILLACSHT 570

Query: 292 LLLREGRSVHGYAIR--RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            L  +G+S         R +   +     + D   +   L +AE     +    D V+W 
Sbjct: 571 GLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWT 630

Query: 350 SMISGLFKEMLYLCSQFSFSTLLAILPSC 378
           S+++          ++   + LL + P C
Sbjct: 631 SLLAACRNHRDLKRAKEVANKLLRLEPRC 659


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/588 (32%), Positives = 311/588 (52%), Gaps = 36/588 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           +S    L   +   G +    + F  ++  D+  +N +I GF+ NG  + +  L   ++ 
Sbjct: 46  LSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRK 105

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
             ++ PD  T    IS  +     R G  +H ++I   +  +L + ++++D Y K     
Sbjct: 106 KTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAE 165

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ + P  D V WN+MISG            +F +ML +   F  +TL  +L + 
Sbjct: 166 LARKVFD-VMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAV 224

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              +    G  I C   K G  ++   +  L+ +Y  CG       L  +I    D   +
Sbjct: 225 AELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ-PDLISY 283

Query: 439 NIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
           N +I   T N   + A+  F+ +  + Q+  S   V L+ V     +L+L+   + +  L
Sbjct: 284 NAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS---RLIQNL 340

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           +LK  + L   V  AL T+Y R  +++ A  +F+     +L +WN MIS ++QN    RA
Sbjct: 341 SLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRA 400

Query: 557 LELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           + LF+ +  +  PN +++ SILSAC QLG L  GK +HG +     + N ++S+AL+DMY
Sbjct: 401 ISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMY 460

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               K+   W++MI+ YG HG G EA++LF+EM  SGI PT  + +
Sbjct: 461 AKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFL 520

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L ACSHSGLV EG + +++M   Y  +P +EH+ C+VD+LGR+G+L  A EFI+ +P+
Sbjct: 521 SILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPL 580

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +P P VWGA+L AC  H +T+M    ++ LF+L+PENVGYY+ LSN+Y
Sbjct: 581 EPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIY 628



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 219/457 (47%), Gaps = 18/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  ++L   ++++  Y   +  E +  +F     +D V WN MI+    N      +  F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ G+ FDSTTL  +++A+ ++   + G  + CL+ K G+ +D  +    +++Y+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G        F  +   D +S+N ++SG   N+  E  +  FRE+  SG++ ++ +L   +
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L   ++I  L +K+G    P  SV+ +L ++Y +  +++ A + F     K 
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQP--SVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + SWNA+I G+  NG  + A  L  EM  M  + P+  TV +++S CA    L  G+ VH
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEM--MPQLSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G      L  ++ +  +L+D Y+K  S+ +A  LF+ +   N +V+WN+MI+G       
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN-VVTWNAMITGYGLHGHG 497

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
                LF EML      +  T L+IL +C+    +  G  I H      GF   +     
Sbjct: 498 KEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYAC 557

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G L  A   ++R+      + W  ++ AC
Sbjct: 558 MVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 222/483 (45%), Gaps = 21/483 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GIRFDSTTLLIIVSALTQMN 87
           LF +    D+  +N +I    +N      +  +  + ++  +R D+ T    +SA +++ 
Sbjct: 68  LFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLE 127

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
             + G ++H  SI  G+ ++  + +  V++Y K      +   F  M   DTV WNT++S
Sbjct: 128 DERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMIS 187

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N+Y E  +  F +M   G   D+ +L++ + A A L E   G  I  L  K G   
Sbjct: 188 GFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHS 247

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             Y  V   LIS+YS+CG        F  +   D++S+NA+I G+  N + E A  L  E
Sbjct: 248 DVY--VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           + L      + +T+V LI +      L+  R +   +++  +     +  +L   Y + N
Sbjct: 306 L-LASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLN 364

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A  LF+  +P   L SWN+MISG            LF+EM+   S  +  T+ +IL
Sbjct: 365 EVQFARQLFDE-SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSP-NPVTVTSIL 422

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    +L  GK +H         +N     AL+ MY  CG +V A  L   +  + + 
Sbjct: 423 SACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV-DKNV 481

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-H 494
             WN +I     +GH +EA+K F  M  Q    P  VT ++++ AC +  L  EG  + H
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEML-QSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 495 GLA 497
            +A
Sbjct: 541 SMA 543



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 4/300 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + +   T L++ YS          LF +    D++++NAMI+    N      +  
Sbjct: 243 KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTL 302

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++  G R +S+TL+ ++      N L+  R++  LS+K G+I   S+      +Y +
Sbjct: 303 FRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCR 362

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             ++  +   F         SWN ++SG   N   ++ +  F+EM       + V+++S 
Sbjct: 363 LNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSI 421

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A LG LS GK +H L      E + YVS   +L+ MY++CG I  A + F  M  K
Sbjct: 422 LSACAQLGALSIGKWVHGLIKSERLESNVYVS--TALVDMYAKCGSIVEARQLFDLMVDK 479

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV+WNA+I G+ L+G  +EA  L +EM L   + P   T ++++  C+ S L+ EG  +
Sbjct: 480 NVVTWNAMITGYGLHGHGKEALKLFYEM-LQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538


>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1111

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 228/808 (28%), Positives = 394/808 (48%), Gaps = 69/808 (8%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+++TA +       +  LF     KD + WNAMI+   +       L+ F  M  EG++
Sbjct: 186 TAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVK 245

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  +++ ++SA TQ+  L QGR  H    +  +     L    V++YAKCGD++ +   
Sbjct: 246 VNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEV 305

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM   +  +W++ ++G   N + EKCL  F  M   G   + V+  S +   + +G +
Sbjct: 306 FWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 365

Query: 191 SYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAI 248
             G K   ++  + G E  P +     L+ +Y++ G +E A      M  K     W+++
Sbjct: 366 DEGQKHFDSMRNEFGIE--PQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSL 423

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL----LLREGRSVHGYA 304
           +    +    E    +L   +++     +    V L ++ ADS     +    +S+    
Sbjct: 424 LHASRMYKNLE--LGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKG 481

Query: 305 IRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
           +R+  G  ++ +N  + +F+    S  K    +N I  +   +S    ++G   +     
Sbjct: 482 VRKQPGCSVMEVNGEVHEFFVGDKSHPK----YNEIDAVWKDISRRLRLAGYKAD----- 532

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN---CGDLV 420
              +   +  I       E  E    +H  +  + F   ++  +  + +  N   CGD  
Sbjct: 533 ---TTPVMFDI-----DEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDCH 584

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI----KTFKSMTQQQNAS----PDSV 472
               ++ +I +        I++    +  HF++      K F+ +++   +     P+ V
Sbjct: 585 QVSMMISKIFNRE------IIVRDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVGFRPNEV 638

Query: 473 TLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           T +++ISAC   GN E   EG  +HGL +KS +  + +V NAL+ +YG+  D+ S+  +F
Sbjct: 639 TFLSMISACVHGGNKE---EGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLF 695

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
           E     NL +WN MI    QN      L  F   R +  +P++ + +++L  C  +GV+R
Sbjct: 696 EDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVR 755

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYG 631
             + IHG +   GF  N+ I++ALLD+Y+                   + AW++M++AY 
Sbjct: 756 LSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYA 815

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG G +AI+ F  M + G+ P   +   LL+ACSHSGLV+EG  Y+  M + Y + P  
Sbjct: 816 THGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRL 875

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C+VD++GRSG LQ+AY  IK +P++P  GVWGA+L AC  + DT++G + A+ LF+
Sbjct: 876 DHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFE 935

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           LEP +   YI LSN+Y A G WKDA  I
Sbjct: 936 LEPRDGRNYIMLSNIYSASGLWKDASRI 963



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 49/361 (13%)

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG---------- 517
            PD+ T+  ++ AC  L +   G  +HG+ ++     D  VQ  LI++Y           
Sbjct: 113 KPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 172

Query: 518 ---------------------RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
                                RC D+  A  +FE     +   WN MIS ++Q      A
Sbjct: 173 VFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREA 232

Query: 557 LELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L LF  ++ E    N +S++S+LSACTQLG L  G+  H ++     +    + + L+D+
Sbjct: 233 LNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDL 292

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               K+   WSS ++    +G G + ++LF  M   G+ P   + 
Sbjct: 293 YAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTF 352

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +S+L  CS  G VDEG +++++M  E+ + P+ +H+ C+VD+  R+G+L++A   I+ +P
Sbjct: 353 VSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMP 412

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++    VW ++L A   + + ++G   ++ + +LE  N G Y+ LSN+Y     W +   
Sbjct: 413 MKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSH 472

Query: 779 I 779
           +
Sbjct: 473 V 473



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 192/449 (42%), Gaps = 52/449 (11%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD--LNSSECTFSGMHCA 137
           +S L      K+ R +H      G + D  L   FV   A      L+ +          
Sbjct: 18  ISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKP 77

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLGELSYGKV 195
              + N+++     +  PEK   ++  +  SG   + DN +++  V A   LG    G  
Sbjct: 78  TLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQ 137

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQ-------------------------------C 224
           +H + I+ G+++ P+V     LIS+Y++                               C
Sbjct: 138 VHGMTIRRGFDNDPHVQT--GLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARC 195

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           GD+  A + F GM  KD ++WNA+I G+A  G+  EA +L H MQL   V+ +  +++++
Sbjct: 196 GDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQL-EGVKVNGVSMISV 254

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +S C     L +GR  H Y  R  +   + +  +L+D Y+K   + KA  +F  +   N 
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKN- 313

Query: 345 LVSWNSMISGL----FKE----MLYLCSQFSFS----TLLAILPSCNSPESLEFG-KSIH 391
           + +W+S ++GL    F E    +  L  Q   +    T +++L  C+    ++ G K   
Sbjct: 314 VYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFD 373

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
             + + G          L+ +Y   G L  A S++Q++   +  + W+ ++ A     + 
Sbjct: 374 SMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNL 433

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +  +   K M + + ++  +  L++ I A
Sbjct: 434 ELGVLASKKMLELETSNHGAYVLLSNIYA 462



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/343 (20%), Positives = 133/343 (38%), Gaps = 90/343 (26%)

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSAC 579
           A+ + +      L   N MI A  ++    ++ + +  +       +P+  ++  ++ AC
Sbjct: 67  ANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQAC 126

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------------- 617
           T LG+   G Q+HG     GF  +  + + L+ +Y+                        
Sbjct: 127 TGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRT 186

Query: 618 ------------------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
                                   K   AW++MIS Y   G+  EA+ LFH M   G++ 
Sbjct: 187 AMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKV 246

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE- 712
              S+IS+LSAC+  G +D+G ++ ++ +E   ++        +VD+  + G + +A E 
Sbjct: 247 NGVSMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEV 305

Query: 713 ---------------------------------FIKNLPIQPKPGVWGAMLSACSHHGDT 739
                                             +K   + P    + ++L  CS  G  
Sbjct: 306 FWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 365

Query: 740 KMGKQVAELL---FKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             G++  + +   F +EP+ + +Y  L ++Y   GR +DAV I
Sbjct: 366 DEGQKHFDSMRNEFGIEPQ-LDHYGCLVDLYARAGRLEDAVSI 407



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 87/193 (45%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    +L+  Y       SS  LF +   K++V+WN MI   ++N     GL +F
Sbjct: 667 GVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF 726

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                 G++ D  T L ++     +  ++  + +H L +  G  A++ +    +++YAK 
Sbjct: 727 NMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKL 786

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  S   F  +   D+++W  +++    + Y    + +F  M   G   D+V+ +  +
Sbjct: 787 GRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLL 846

Query: 182 AASACLGELSYGK 194
            A +  G +  G+
Sbjct: 847 NACSHSGLVEEGR 859


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 197/610 (32%), Positives = 320/610 (52%), Gaps = 56/610 (9%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL--HEM 268
           +S+   L+S+Y   G  + A   F  +   D   W  I+  + LN    E+F+++  +++
Sbjct: 88  ISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN---NESFEVIKFYDL 144

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +      D       +  C +   L  G+ +H   I ++  +D +++  L+D Y+K   
Sbjct: 145 LMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC-QIVKVPSFDNVVLTGLLDMYAKCGE 203

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY---------------LCSQFSFSTLLA 373
           +  +  +F  I  + ++V W SMI+G  K  LY               L +++++ TL+ 
Sbjct: 204 IKSSYKVFEDIT-LRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVM 262

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
              +C    +L  GK  H   +K G   ++  V +L+ MY+ CGD+  A  +    SH  
Sbjct: 263 ---ACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH-V 318

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEG 490
           D   W  +IV  T NG   EA+  F+ M+      P+ VT+ +V+S CG   NLEL   G
Sbjct: 319 DLVMWTAMIVGYTHNGSVNEALSLFQKMSGV-GIKPNCVTIASVLSGCGLVGNLEL---G 374

Query: 491 KSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           +S+HGL++K  +G+ DT V NAL+ MY +C   + A  VFE     ++  WN +IS FSQ
Sbjct: 375 RSIHGLSIK--VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 432

Query: 550 NKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-- 604
           N +   AL LF  +  E   PN +++ S+ SAC  LG L  G  +H +   LGF  +S  
Sbjct: 433 NGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSV 492

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + +ALLD Y+ C               K+   WS+MI  YG  G    ++ELF EM   
Sbjct: 493 HVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKK 552

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
             +P +S+  S+LSACSH+G+V+EG +Y+++M ++Y+  P T+H+ C+VDML R+G+L++
Sbjct: 553 QQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 612

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A + I+ +PIQP    +GA L  C  H    +G+ V + +  L P++  YY+ +SN+Y +
Sbjct: 613 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 672

Query: 770 LGRWKDAVEI 779
            GRW  A E+
Sbjct: 673 DGRWSQAKEV 682



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 235/486 (48%), Gaps = 27/486 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T LL  Y+     +SS  +F +   ++VV W +MI   V+N     GL  F  M E  + 
Sbjct: 192 TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL 251

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   +V A T++  L QG+  H   IK+G+   S L    ++MY KCGD++++   
Sbjct: 252 GNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRV 311

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+     D V W  ++ G  HN    + L  F++M   G + + V+++S ++    +G L
Sbjct: 312 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNL 371

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ IH L IK+G  D+   +V N+L+ MY++C     A+  F   + KD+V+WN+II 
Sbjct: 372 ELGRSIHGLSIKVGIWDT---NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 428

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF+ NG   EA  L H M    SV P+  TV +L S CA    L  G S+H Y+++  LG
Sbjct: 429 GFSQNGSIHEALFLFHRMN-TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVK--LG 485

Query: 311 Y----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           +     + +  +L+DFY+K      A L+F+ I   N  ++W++MI G            
Sbjct: 486 FLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKN-TITWSAMIGGYGKQGDTKGSLE 544

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMY 413
           LF+EML    + + ST  ++L +C+    +  GK       K   F+ +T     ++ M 
Sbjct: 545 LFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 604

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G+L  A  +++++    D  C+   +  C  +  F       K M    +  PD  +
Sbjct: 605 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML---DLHPDDAS 661

Query: 474 LVNVIS 479
              ++S
Sbjct: 662 YYVLVS 667



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 263/545 (48%), Gaps = 25/545 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           G +  +  +T L++ Y +  Y + +  +F +    D   W  ++   C+ N    + + F
Sbjct: 83  GLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEV-IKF 141

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  +++ G  +D       + A T++  L  G+ +HC  +K     D+ +    ++MYAK
Sbjct: 142 YDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSF-DNVVLTGLLDMYAK 200

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ SS   F  +   + V W ++++G + N+  E+ L+ F  M  +    +  +  + 
Sbjct: 201 CGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTL 260

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A   L  L  GK  H   IK G E S    +  SL+ MY +CGDI  A R F   +  
Sbjct: 261 VMACTKLRALHQGKWFHGCLIKSGIELSS--CLVTSLLDMYVKCGDISNARRVFNEHSHV 318

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V W A+I G+  NG   EA  L  +M  +  ++P+  T+ +++S C     L  GRS+
Sbjct: 319 DLVMWTAMIVGYTHNGSVNEALSLFQKMSGV-GIKPNCVTIASVLSGCGLVGNLELGRSI 377

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           HG +I+  + +D  + N+L+  Y+K      A+ +F  +    D+V+WNS+ISG      
Sbjct: 378 HGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGS 435

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGV- 406
             E L+L  + +         T+ ++  +C S  SL  G S+H + +KLGF +++++ V 
Sbjct: 436 IHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVG 495

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+  Y  CGD  +A  +   I    +T  W+ +I    + G  + +++ F+ M ++Q 
Sbjct: 496 TALLDFYAKCGDAESARLIFDTIEEK-NTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQ 554

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSA 525
             P+  T  +V+SAC +  +  EGK       K       T+    ++ M  R  +++ A
Sbjct: 555 -KPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQA 613

Query: 526 STVFE 530
             + E
Sbjct: 614 LDIIE 618


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 196/605 (32%), Positives = 315/605 (52%), Gaps = 43/605 (7%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           ++N LI+MY +CG  ++A   F GM  ++ VSW A+I   A N +  +A  L   M L  
Sbjct: 84  LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM-LRS 142

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              PD   + + I  C++   L  GR VH  AI+   G DL++ N+L+  YSKS S+   
Sbjct: 143 GTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDG 202

Query: 333 ELLFNAIAPMNDLVSWNSMISGL------------FKEML----YLCSQFSFSTLLAILP 376
             LF  I    DL+SW S+I+GL            F+EM+    +  ++F F +   +  
Sbjct: 203 FALFERIRD-KDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGS---VFR 258

Query: 377 SCNSP-ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           +C+    SLE+G+ IH   +K     N+    +L  MY  C +L +A  +  RI  + D 
Sbjct: 259 ACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIE-SPDL 317

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I A +  G   EA+  F  M +     PD +T++ ++ AC   +   +G+S+H 
Sbjct: 318 VSWNSLINAFSAKGLLSEAMVLFSEM-RDSGLRPDGITVMALLCACVGYDALHQGRSIHS 376

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K  +G D  V N+L++MY RC D  SA  VF   ++ ++ TWN +++A  Q++    
Sbjct: 377 YLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLED 436

Query: 556 ALELFRHLEFE-P--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
             +LF  L    P  + IS+ ++LSA  +LG     KQ+H + F +G   ++ +S+ L+D
Sbjct: 437 VFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLID 496

Query: 613 MYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            Y+ C                +   +WSS+I  Y   G   EA++LF  M N G++P   
Sbjct: 497 TYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHV 556

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + + +L+ACS  GLVDEG  YY+ M  EY + P  EH  C++D+L R+G+L EA +F+  
Sbjct: 557 TFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQ 616

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P +P   +W  +L+A   H D  MGK+ AE +  ++P +   Y+ L N+Y + G W + 
Sbjct: 617 MPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEF 676

Query: 777 VEIGK 781
             + K
Sbjct: 677 ARLKK 681



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 267/529 (50%), Gaps = 31/529 (5%)

Query: 84  TQMNCLKQGRVVH----CLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +++  L QGR+VH      S +   +A ++ L N  + MY +CG  +S+   F GM   +
Sbjct: 53  SRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRN 112

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            VSW  +++    N+     +  F  M  SG   D  +L SA+ A + LG+L  G+ +HA
Sbjct: 113 PVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHA 172

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             IK  +E    + V N+L++MYS+ G +      F  +  KD++SW +II G A  G+ 
Sbjct: 173 QAIK--WESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230

Query: 259 EEAFDLLHEMQLMRSVEPD---IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
            +A  +  EM       P+     +V    S+  +S  L  G  +HG +++  L  +   
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNS--LEYGEQIHGVSVKYQLDRNSYA 288

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS- 369
             SL D Y++ N L  A  +F  I    DLVSWNS+I+     GL  E + L S+   S 
Sbjct: 289 GCSLSDMYARCNELDSARKVFYRIES-PDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSG 347

Query: 370 ------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                 T++A+L +C   ++L  G+SIH + +KLG   + I  N+L+ MY  C D  +A 
Sbjct: 348 LRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAM 407

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +    +H+ D   WN ++ AC Q+ H ++  K F S+  +   S D ++L NV+SA   
Sbjct: 408 DVFHE-THDRDVVTWNSILTACVQHQHLEDVFKLF-SLLHRSMPSLDRISLNNVLSASAE 465

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNC 542
           L      K +H  A K  +  D  + N LI  Y +C  +  A+ +FE      ++ +W+ 
Sbjct: 466 LGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSS 525

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
           +I  ++Q      AL+LF   R+L  +PN ++ V +L+AC+++G++  G
Sbjct: 526 LIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEG 574



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 266/564 (47%), Gaps = 28/564 (4%)

Query: 3   FLAH-LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCV-VMGLH 59
           FLAH    S  L+T Y      +S+  +F    +++ V+W A+I A  +N RC   MGL 
Sbjct: 77  FLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGL- 135

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M+  G   D   L   + A +++  L  GR VH  +IK    +D  + N  V MY+
Sbjct: 136 -FSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYS 194

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G +      F  +   D +SW +I++G          L  FREM   G    N     
Sbjct: 195 KSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFG 254

Query: 180 AV--AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +V  A S  +  L YG+ IH + +K   + + Y     SL  MY++C ++++A + F+ +
Sbjct: 255 SVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGC--SLSDMYARCNELDSARKVFYRI 312

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              D+VSWN++I+ F+  G   EA  L  EM+    + PD  TV+ L+  C     L +G
Sbjct: 313 ESPDLVSWNSLINAFSAKGLLSEAMVLFSEMR-DSGLRPDGITVMALLCACVGYDALHQG 371

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
           RS+H Y ++  LG D+++ NSL+  Y++    S A  +F+      D+V+WNS+++   +
Sbjct: 372 RSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHD-RDVVTWNSILTACVQ 430

Query: 358 EMLYLCSQFS-FSTLLAILPSCNS-------PESLEFG-----KSIHCWQLKLGFSNNTI 404
              +L   F  FS L   +PS +          S E G     K +H +  K+G   + +
Sbjct: 431 HQ-HLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAM 489

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             N L+  Y  CG L  A  L + +    D   W+ +IV   Q G+ +EA+  F  M + 
Sbjct: 490 LSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARM-RN 548

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRC-RDI 522
               P+ VT V V++AC  + L  EG   + +       + TR   + ++ +  R  R  
Sbjct: 549 LGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLS 608

Query: 523 KSASTVFESCYNCNLCTWNCMISA 546
           ++A  V +  +  ++  W  +++A
Sbjct: 609 EAAKFVDQMPFEPDIIMWKTLLAA 632


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 209/716 (29%), Positives = 365/716 (50%), Gaps = 38/716 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G  +H L+ +AG++ +  +    +++Y   G + +++  F  M   + VSW  IM     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   E+ L+ +R M   G   +  +L++ V+    L +   G  + A  +  G     +V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGL--LTHV 180

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           SV NSLI+M+     ++ AER F  M  +D +SWNA+I  ++    + + F +L +M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR-H 239

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V+PD+ T+ +L+S+CA S L+  G  +H   +   L   + ++N+L++ YS +  L +
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF--------SFSTLLAILPSC 378
           AE LF  ++   D++SWN+MIS   +     E L    Q         +  T  + L +C
Sbjct: 300 AESLFRNMS-RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +SPE+L  G++IH   L+    N  +  N+L+ MY  C  +     + + +      SC 
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC- 417

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHGLA 497
           N++            A++ F  M +     P+ +T++N+   C +L +L   G  LH   
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWM-RGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            ++ +  D  + N+LITMY  C D++S++ +F    N ++ +WN +I+A  ++     A+
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 558 ELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +LF   +   N++    +   LS+   L  L  G Q+HG     G   +S + +A +DMY
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
             C               +    W+++IS Y  +G   EA + F  M + G +P   + +
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +LLSACSH+GL+D+G+ YYN+M   + V P  +H VCIVD+LGR GK  EA +FI  +P+
Sbjct: 657 ALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPV 716

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            P   +W ++LS+   H +  +G++ A+ L +L+P +   Y+ LSN+Y    RW D
Sbjct: 717 LPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVD 772



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 295/604 (48%), Gaps = 23/604 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++   T+LL  Y +     ++  LF+E   ++VV+W A++ A   N C+   L  +
Sbjct: 74  GLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAY 133

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +EG+  ++  L  +VS    +     G  V    + +G++   S+ N  + M+   
Sbjct: 134 RRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNL 193

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +E  F  M   D +SWN ++S   H     KC +   +M     + D  +L S V
Sbjct: 194 RRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLV 253

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A    ++ G  IH+L +  G   S  V + N+L++MYS  G ++ AE  F  M+ +D
Sbjct: 254 SVCASSDLVALGSGIHSLCVSSGLHCS--VPLINALVNMYSTAGKLDEAESLFRNMSRRD 311

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I  +  +    EA + L ++       P+  T  + +  C+    L  GR++H
Sbjct: 312 VISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIH 371

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++R L   LL+ NSL+  YSK NS+   E +F ++ P  D+VS N +  G       
Sbjct: 372 AMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESM-PCYDVVSCNVLTGGYAALEDV 430

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-FGKSIHCWQLKLGFSNNTIGVNA 408
                +F  M     + ++ T++ +  +C S   L  +G  +H +  + G  ++    N+
Sbjct: 431 ANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNS 490

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CGDL ++  +  RI++ S  S WN +I A  ++G  +EAIK F   +Q     
Sbjct: 491 LITMYATCGDLESSTGIFSRINNKSVIS-WNAIIAANVRHGRGEEAIKLFMD-SQHAGNK 548

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-ST 527
            D   L   +S+  NL    EG  LHGL++K+ +  D+ V NA + MYG+C  +     T
Sbjct: 549 LDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKT 608

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           + +  +    C WN +IS +++      A + F+H+     +P+ ++ V++LSAC+  G+
Sbjct: 609 LPDPAHRPTQC-WNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGL 667

Query: 585 LRHG 588
           +  G
Sbjct: 668 IDKG 671



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 171/664 (25%), Positives = 302/664 (45%), Gaps = 51/664 (7%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG---ELSYGKVIH 197
           SW T +SGC             R M          +L+S V A    G     + G  IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           AL  + G   + Y+    +L+ +Y   G +  A+R FW M  ++VVSW AI+   + NG 
Sbjct: 68  ALTHRAGLMGNVYIGT--ALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGC 125

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA      M+    V  +   + T++SLC        G  V  + +   L   + + N
Sbjct: 126 MEEALVAYRRMR-KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVAN 184

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY-LC-----------SQ 365
           SL+  +     +  AE LF+ +    D +SWN+MIS    E +Y  C            +
Sbjct: 185 SLITMFGNLRRVQDAERLFDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
              +TL +++  C S + +  G  IH   +  G   +   +NAL++MY   G L  A SL
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            + +S   D   WN +I +  Q+    EA++T   + Q     P+S+T  + + AC + E
Sbjct: 304 FRNMSRR-DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES--CYN---CNLCTW 540
               G+++H + L+  +     + N+L+TMY +C  ++    VFES  CY+   CN+ T 
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR-HGKQIHGHVFHLG 599
               +A       +R     R    +PN I+++++   C  LG L  +G  +H +V   G
Sbjct: 423 G--YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG 480

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
              + +I+++L+ MY+ C               KS  +W+++I+A   HG+G EAI+LF 
Sbjct: 481 LLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFM 540

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLG 702
           +  ++G +  +  +   LS+ ++   ++EG+Q +   ++      + + HV    +DM G
Sbjct: 541 DSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKN---GLDCDSHVVNATMDMYG 597

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL--EPENVGYY 760
           + GK+    + + + P       W  ++S  + +G  K  +   + +  +  +P+ V + 
Sbjct: 598 KCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 761 ISLS 764
             LS
Sbjct: 657 ALLS 660



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/320 (22%), Positives = 141/320 (44%), Gaps = 26/320 (8%)

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGK 491
           +S W   +  C + G    A    + M ++++       L ++++AC   G  E A  G 
Sbjct: 6   SSSWYTAVSGCARCGLESTAFTLLRVM-RERDVPLSGFALASLVTACEHRGWQEGAACGA 64

Query: 492 SLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           ++H L  ++ LMG +  +  AL+ +YG    + +A  +F      N+ +W  ++ A S N
Sbjct: 65  AIHALTHRAGLMG-NVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSN 123

Query: 551 KAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL  +R +  E    N  ++ +++S C  L     G Q+  HV   G   +  ++
Sbjct: 124 GCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVA 183

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           ++L+ M+ N                +   +W++MIS Y +     +   +  +M +  ++
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P  +++ SL+S C+ S LV  G   + ++     +         +V+M   +GKL EA  
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 713 FIKNLPIQPKPGVWGAMLSA 732
             +N+  +     W  M+S+
Sbjct: 303 LFRNMSRRDVIS-WNTMISS 321


>gi|302785287|ref|XP_002974415.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
 gi|300158013|gb|EFJ24637.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
          Length = 659

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/664 (28%), Positives = 337/664 (50%), Gaps = 48/664 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           +  ++     +N P       R+M   G   + ++L   ++A   L  +  G  IH   I
Sbjct: 4   YTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQWII 63

Query: 202 KLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            LG + DS    +  +L++ +++ G ++ A+ AF  +  KD+++WNAII   + + +  E
Sbjct: 64  DLGLHRDS---VLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHE 120

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM-NSL 319
           A DL   MQL   + P+  T+V ++S+  +S    + R+VH  A+   +    + + NS+
Sbjct: 121 ALDLFRRMQL-DGIHPNAITLVAVLSIFQESST--DARAVHSLAMESAMDESSVAVGNSI 177

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSF 368
           ++ Y++   L +A L F  I   N +VSWN MIS            +F  M+    +   
Sbjct: 178 VNMYARCRDLDRARLAFARIQSKN-VVSWNVMISAHSQLDRLHPLAMFHAMMLEGIKADA 236

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSN----NTIGVNALMHMYINCGDLVAAFS 424
           +T + +     +P  L  G+ +H    +LG       + +   +L+ M+  CG +  A  
Sbjct: 237 TTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARD 296

Query: 425 LLQR--ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           +       H  +   WN +I A  QN  F +A+  F++M Q Q    D++T V+ I AC 
Sbjct: 297 IFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTM-QLQGVPSDAITFVSTIDACT 355

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            LE    G++LHG+  +S +  DT V  AL+  Y + R + +A+  F+     +L  WN 
Sbjct: 356 ALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIPEPDLVAWNV 415

Query: 543 MISAFSQNKAEVRALELFRH-LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +I+A   N     ALE+F H +E +P+ I+ ++ L+AC     L  G+++H  +   G  
Sbjct: 416 LIAAHVDNADSSTALEIFFHRMELKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLH 475

Query: 602 ENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
            +  ++SAL+DMYS C                +++A W+++I+ +  HG    A  L  E
Sbjct: 476 SDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVRE 535

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G+ P   + + LL ACSH+GL+++G +++  ++E+  +  + EH+ C+VD+LGR+G
Sbjct: 536 MQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAG 595

Query: 706 KLQEAYEFI----KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           KL EA EF+    + +P+     +W ++LSAC  HGD ++ ++ A  +  LEP +   ++
Sbjct: 596 KLAEAEEFLLGLRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLEPRHPAAFV 655

Query: 762 SLSN 765
            LSN
Sbjct: 656 VLSN 659



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 168/651 (25%), Positives = 289/651 (44%), Gaps = 74/651 (11%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V  + A+I A   +           +M  +GI  +  TL+ I+SA T ++ +  G  +H 
Sbjct: 1   VAMYTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQ 60

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
             I  G+  DS L    +  +A+ G L+ ++  F+ +   D ++WN I++   H+N   +
Sbjct: 61  WIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHE 120

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSY-GKVIHALGIKLGYEDSPYVSVTNS 216
            L  FR M   G   + ++L   VA  +   E S   + +H+L ++   ++S  V+V NS
Sbjct: 121 ALDLFRRMQLDGIHPNAITL---VAVLSIFQESSTDARAVHSLAMESAMDESS-VAVGNS 176

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           +++MY++C D++ A  AF  +  K+VVSWN +I   +   +      + H M ++  ++ 
Sbjct: 177 IVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLHP-LAMFHAM-MLEGIKA 234

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIR----RLLGYDLLMMNSLMDFYSKSNSLSKA 332
           D  T V L S  A    LR+G  +H  A      R L YD ++  SL+  ++K  S++ A
Sbjct: 235 DATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHA 294

Query: 333 ELLF--NAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSC 378
             +F  N      + V WN++I+ L     F + L L              T ++ + +C
Sbjct: 295 RDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDAC 354

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            + E    G+++H    +     +TI   AL++ Y     L AA +  QRI    D   W
Sbjct: 355 TALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIP-EPDLVAW 413

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N++I A   N     A++ F     +    PD +T +  ++AC        G+ LH    
Sbjct: 414 NVLIAAHVDNADSSTALEIF---FHRMELKPDRITFITTLAACVTASALPLGRRLHEQIR 470

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRAL 557
           +  +  D  V +AL+ MY +C  ++ A  VF +     N  TWN +I+  +Q+    RA 
Sbjct: 471 QRGLHSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAP 530

Query: 558 ELFRHLEF---EPNEISIVSILSACTQLGVL----------------------------- 585
            L R ++    EP+ ++ V +L AC+  G+L                             
Sbjct: 531 SLVREMQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDL 590

Query: 586 --RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
             R GK      F LG +    +++          S A W+S++SA G HG
Sbjct: 591 LGRAGKLAEAEEFLLGLRRAMPVAA----------SAAMWTSLLSACGVHG 631



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 265/595 (44%), Gaps = 39/595 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LLT ++     + + A F     KD++ WNA+ITA   +      L  F  M  +GI 
Sbjct: 75  TALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHEALDLFRRMQLDGIH 134

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSEC 129
            ++ TL+ ++S   + +     R VH L++++ M   S ++ N  VNMYA+C DL+ +  
Sbjct: 135 PNAITLVAVLSIFQESST--DARAVHSLAMESAMDESSVAVGNSIVNMYARCRDLDRARL 192

Query: 130 TFSGMHCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            F+ +   + VSWN ++S    L   +P   L  F  M   G +AD  +  +  +  A  
Sbjct: 193 AFARIQSKNVVSWNVMISAHSQLDRLHP---LAMFHAMMLEGIKADATTFVNLASGLAAP 249

Query: 188 GELSYGKVIHALGIKLGYEDS-PYVSV-TNSLISMYSQCGDIEAAERAFW-GMTC--KDV 242
             L  G+++H    +LG   +  Y +V   SL++M+++CG +  A   F     C  ++ 
Sbjct: 250 SPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARDIFHENFHCHERNP 309

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V WNAII     N  F +A  L   MQL + V  D  T V+ I  C        GR++HG
Sbjct: 310 VVWNAIIAALVQNHDFSDALLLFRTMQL-QGVPSDAITFVSTIDACTALEDFSTGRALHG 368

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
                 L  D ++  +L++FYSKS  L  A   F  I P  DLV+WN +I+         
Sbjct: 369 IISESSLETDTIVATALVNFYSKSRRLDAATAAFQRI-PEPDLVAWNVLIAAHVDNADSS 427

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F  M     + +F T LA   +C +  +L  G+ +H    + G  ++ I  +AL
Sbjct: 428 TALEIFFHRMELKPDRITFITTLA---ACVTASALPLGRRLHEQIRQRGLHSDVIVASAL 484

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A+ +   ++   +++ WN +I    Q+G    A    + M Q +   P
Sbjct: 485 VDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREM-QLEGVEP 543

Query: 470 DSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           DS+T V ++ AC +  L  +G K    L     + +       ++ + GR   +  A   
Sbjct: 544 DSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAGKLAEAEEF 603

Query: 529 FESCYN-----CNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
                       +   W  ++SA       E+      R L+ EP   +   +LS
Sbjct: 604 LLGLRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLEPRHPAAFVVLS 658



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 144/293 (49%), Gaps = 11/293 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCN---KDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +TSL+T ++       +  +F+E  +   ++ V WNA+I A V+N      L  F  M  
Sbjct: 278 ATSLVTMFAKCGSVAHARDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQL 337

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +G+  D+ T +  + A T +     GR +H +  ++ +  D+ +    VN Y+K   L++
Sbjct: 338 QGVPSDAITFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDA 397

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASA 185
           +   F  +   D V+WN +++  + N      L ++F  M     + D ++  + +AA  
Sbjct: 398 ATAAFQRIPEPDLVAWNVLIAAHVDNADSSTALEIFFHRMEL---KPDRITFITTLAACV 454

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVS 244
               L  G+ +H    + G      V V ++L+ MYS+CG +E A + F  M   ++  +
Sbjct: 455 TASALPLGRRLHEQIRQRGLHSD--VIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSAT 512

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           WNA+I G A +G    A  L+ EMQL   VEPD  T V L+  C+ + LL +G
Sbjct: 513 WNALIAGHAQHGFSGRAPSLVREMQL-EGVEPDSLTYVGLLLACSHAGLLEDG 564


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 193/618 (31%), Positives = 317/618 (51%), Gaps = 40/618 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + IHAL +  G  +   +     L+S+Y   G +E A   F  +   D+ SW  +I  + 
Sbjct: 56  RKIHALLVVHGLSED--LLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYF 113

Query: 254 LNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           LN  + E     +  +L + + E D      ++  C++     EGR +H   I ++   D
Sbjct: 114 LNDSYSEIVQF-YNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHC-QIVKVGSPD 171

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             ++  L+D Y+K   +  +  +F+ I   N +V W SMI G            LF  M 
Sbjct: 172 SFVLTGLVDMYAKCREVEDSRRVFDEILDRN-VVCWTSMIVGYVQNDCLKEGLVLFNRMR 230

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               + +  TL +++ +C    +L  GK +H + +K GF  N+  V  L+ +Y  CGD+ 
Sbjct: 231 EGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIR 290

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            AFS+   +S   D   W  +IV   Q G+ +EA+K F    + ++  P++VT  +V+SA
Sbjct: 291 DAFSVFDELS-TIDLVSWTAMIVGYAQRGYPREALKLFTD-ERWKDLLPNTVTTSSVLSA 348

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C        G+S+H L +K L   D   +NAL+ MY +C  I  A  VFE+ ++ ++  W
Sbjct: 349 CAQTGSLNMGRSVHCLGIK-LGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAW 407

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +IS ++QN     ALELF  +  +   P+ I++VS+LSAC  +G  R G  +HG+   
Sbjct: 408 NSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIK 467

Query: 598 LGFQENS-FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
            G    S ++ +ALL+ Y+ C               K+   WS+MI  YG  G    ++E
Sbjct: 468 AGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLE 527

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF +M    + P +    ++LSACSHSG++ EG +Y+N M + Y+  P  +H+ C+VD+L
Sbjct: 528 LFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLL 587

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
            R+G+L+EA +FI+ +PIQP   + GA L  C  H    +G+     + +L P+   YY+
Sbjct: 588 ARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYV 647

Query: 762 SLSNMYVALGRWKDAVEI 779
            +SN+Y + GRW  A ++
Sbjct: 648 LMSNLYASEGRWSQANQV 665



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 189/345 (54%), Gaps = 6/345 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L+  Y+     E S  +F E  +++VV W +MI   V+N C+  GL  F  M E  + 
Sbjct: 176 TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVE 235

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL  +V+A T++  L QG+ VH   IK+G   +S L    +++Y KCGD+  +   
Sbjct: 236 GNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSV 295

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D VSW  ++ G     YP + L  F +  W     + V+ SS ++A A  G L
Sbjct: 296 FDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSL 355

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + G+ +H LGIKLG ED+ +    N+L+ MY++C  I  A   F  +  KDV++WN+II 
Sbjct: 356 NMGRSVHCLGIKLGSEDATF---ENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIIS 412

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LL 309
           G+  NG   EA +L  +M+   SV PD  T+V+++S CA     R G S+HGYAI+  LL
Sbjct: 413 GYTQNGYAYEALELFDQMR-SDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLL 471

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              + +  +L++FY+K      A ++F+ +   N  ++W++MI G
Sbjct: 472 SGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNT-ITWSAMIGG 515



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 274/612 (44%), Gaps = 63/612 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L   T L++ Y +  + E +  +F    N D+ +W  MI     N      + F+
Sbjct: 66  GLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFY 125

Query: 62  GEMVEEGI-RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              + + +  +D+    I++ A +++    +GR +HC  +K G   DS +    V+MYAK
Sbjct: 126 NTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGS-PDSFVLTGLVDMYAK 184

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C ++  S   F  +   + V W +++ G + N+  ++ L+ F  M     + +  +L S 
Sbjct: 185 CREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSL 244

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A   LG L  GK +H   IK G++ + +  +   L+ +Y +CGDI  A   F  ++  
Sbjct: 245 VTACTKLGALHQGKWVHGYVIKSGFDLNSF--LVTPLLDLYFKCGDIRDAFSVFDELSTI 302

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSW A+I G+A  G   EA  L  + +  + + P+  T  +++S CA +  L  GRSV
Sbjct: 303 DLVSWTAMIVGYAQRGYPREALKLFTD-ERWKDLLPNTVTTSSVLSACAQTGSLNMGRSV 361

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I +L   D    N+L+D Y+K + +  A  +F  +    D+++WNS+ISG      
Sbjct: 362 HCLGI-KLGSEDATFENALVDMYAKCHMIGDARYVFETVFD-KDVIAWNSIISGYTQNGY 419

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-N 407
                 LF +M          TL+++L +C S  +   G S+H + +K G  + ++ V  
Sbjct: 420 AYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGT 479

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL++ Y  CGD  +A  +   +    +T  W+ +I      G    +++ F  M +++  
Sbjct: 480 ALLNFYAKCGDAESARVIFDEMGEK-NTITWSAMIGGYGIQGDCSRSLELFGDMLKEK-L 537

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+ V    ++SAC +                 ++G   R  N +  +Y     +K    
Sbjct: 538 EPNEVIFTTILSACSH---------------SGMLGEGWRYFNTMCQVYNFVPSMKH--- 579

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       + CM+   ++      AL+    +  +P+    VS+      LG   H
Sbjct: 580 ------------YACMVDLLARAGRLEEALDFIEKIPIQPD----VSL------LGAFLH 617

Query: 588 GKQIHGHVFHLG 599
           G ++H   F LG
Sbjct: 618 GCRLHSR-FDLG 628



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/402 (19%), Positives = 161/402 (40%), Gaps = 79/402 (19%)

Query: 426 LQRISHNSDTSCW-NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           ++RIS       W N+ + A  +       I + +S++     S    +L+ +     +L
Sbjct: 1   MKRISLLHRHLQWRNLTVTALQRTPEIDRTIASIQSIS-----SNPCFSLLGICKTVSSL 55

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                 + +H L +   +  D   +  L+++YG    ++ A  +F+   N +L +W  MI
Sbjct: 56  ------RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMI 109

Query: 545 SAFSQNKAEVRALELF----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
             +  N +    ++ +    R    E + +    +L AC++L     G+++H  +  +G 
Sbjct: 110 RWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 168

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
             +SF+ + L+DMY+ C               ++   W+SMI  Y  +    E + LF+ 
Sbjct: 169 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNR 228

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM------LEEYDVRPETEHHVCIVD 699
           M    +   + ++ SL++AC+  G + +G   +  +      L  + V P       ++D
Sbjct: 229 MREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTP-------LLD 281

Query: 700 MLGRSGKLQEAYEFIKNL----------------------------------PIQPKPGV 725
           +  + G +++A+     L                                   + P    
Sbjct: 282 LYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVT 341

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
             ++LSAC+  G   MG+ V  L  KL  E+  +  +L +MY
Sbjct: 342 TSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDMY 383


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 185/598 (30%), Positives = 311/598 (52%), Gaps = 36/598 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           + + + L++ Y+ CG +  A + F  +  +  + +N +I  +   G + EA  +  EM  
Sbjct: 55  IDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLG 114

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
            +   PD  T   +I  C++ LL+  GR +HG  +    G  L ++NSL+  Y     + 
Sbjct: 115 SKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVE 174

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSC 378
           +A  +F+A+     +VSWN+MI+G FK            +M+    +   ++++++LP+C
Sbjct: 175 EARKVFDAMKE-KSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPAC 233

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              + LE G+ +H   ++       I  NAL+ MY  CG +  A  +   +    D   W
Sbjct: 234 GYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVER-DVVSW 291

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I     NG  + A+  FK M Q +   P+SVT+  ++ AC +L    +G+ LHG  +
Sbjct: 292 TSMINGYILNGDAKSALSLFKIM-QIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVM 350

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K  +  +  V+ +LI MY +C  +  + +VF          WN ++S    NK    A+ 
Sbjct: 351 KQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIG 410

Query: 559 LFRHLEFEPNEISIV---SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +  E  EI+     S+L A   L  L+    I+ ++   GF  N  ++++L+D+YS
Sbjct: 411 LFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYS 470

Query: 616 NCKSNAA-----------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
            C S  +                 WS +I+ YG HG G  A+ LF +M  SG++P   + 
Sbjct: 471 KCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTF 530

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
            S+L +CSH+G+VD+GL  +  ML+++   P  +H+ C+VD+LGR+G++ EAY+ IK +P
Sbjct: 531 TSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMP 590

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
             P   VWGA+L AC  H + ++G+  A  LF+LEP N G Y+ L+ +Y ALGRW+DA
Sbjct: 591 FMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDA 648



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 281/597 (47%), Gaps = 49/597 (8%)

Query: 5   AHLPTS--------TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVM 56
           AHL TS        + L+  Y++  Y  ++  LF E   +  + +N MI   +       
Sbjct: 45  AHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFE 104

Query: 57  GLHFFGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
            +  F EM+  +    D+ T   ++ A +++  ++ GRV+H L++ +   +   + N  +
Sbjct: 105 AMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLL 164

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            MY  CG++  +   F  M     VSWNT+++G   N +    L+ F +M  SG + D  
Sbjct: 165 AMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGA 224

Query: 176 SLSSAVAASACLGELSYGKVIHA------LGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           S+ S + A   L EL  G+ +H       LG K+         V+N+L+ MY++CG ++ 
Sbjct: 225 SVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI---------VSNALVDMYAKCGSMDE 275

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  +DVVSW ++I+G+ LNG  + A  L   MQ+   + P+  T+  ++  CA
Sbjct: 276 ARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQI-EGLRPNSVTIALILLACA 334

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
               L++GR +HG+ +++ L  ++ +  SL+D Y+K N L  +  +F   +     V WN
Sbjct: 335 SLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS-RKKTVPWN 393

Query: 350 SMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +++S            GLFK+ML    + + +T  ++LP+      L+   +I+ + ++ 
Sbjct: 394 ALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRS 453

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIK 456
           GF +N     +L+ +Y  CG L +A  +   I  +  D   W+I+I     +GH + A+ 
Sbjct: 454 GFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVS 513

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITM 515
            FK M  Q    P+ VT  +V+ +C +  +  +G  L    LK    +        ++ +
Sbjct: 514 LFKQMV-QSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDL 572

Query: 516 YGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEP 567
            GR   +  A  + ++  +      W  ++ A   ++     EV A  LF   E EP
Sbjct: 573 LGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLF---ELEP 626



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 215/461 (46%), Gaps = 24/461 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F +HL    SLL  Y N    E +  +F     K VV+WN MI    +N      L  F 
Sbjct: 153 FGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFN 212

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +MV+ G+  D  +++ ++ A   +  L+ GR VH L ++  ++    + N  V+MYAKCG
Sbjct: 213 QMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCG 271

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            ++ +   F  M   D VSW ++++G + N   +  L  F+ M   G + ++V+++  + 
Sbjct: 272 SMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILL 331

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L  L  G+ +H   +K        V+V  SLI MY++C  +  +   F   + K  
Sbjct: 332 ACASLNNLKDGRCLHGWVMKQRLYSE--VAVETSLIDMYAKCNCLGLSFSVFTRTSRKKT 389

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V WNA++ G   N    EA  L  +M LM  VE + AT  +L+        L+   +++ 
Sbjct: 390 VPWNALLSGCVHNKLATEAIGLFKKM-LMEGVEINAATCNSLLPAYGILADLQPVNNINS 448

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISG------- 354
           Y +R     ++ +  SL+D YSK  SL  A  +FN I   + D+  W+ +I+G       
Sbjct: 449 YLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHG 508

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---- 405
                LFK+M+    + +  T  ++L SC+    ++ G  +  + LK    + TI     
Sbjct: 509 ETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK---DHQTIPNDDH 565

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
              ++ +    G +  A+ L++ +      + W  ++ AC 
Sbjct: 566 YTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACV 606


>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
 gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
          Length = 756

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 209/766 (27%), Positives = 364/766 (47%), Gaps = 97/766 (12%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA------ 137
            ++  L+ G+ +H  S++ GM  +  + N+ +NMY KCG L  +     GM  +      
Sbjct: 6   VRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSWT 65

Query: 138 -------------------------DTVSWNTIMSGCLHNNYP-EKCLLYFREMGWSGEQ 171
                                    D VSWN+++S C  N    +     F++M   G Q
Sbjct: 66  IMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGFQ 125

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D V+  + +   A   +L  G+ +H   +  G +  P  +V N +++MY +C D+E A 
Sbjct: 126 PDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLP--TVANCVVNMYGKCDDLEEAR 183

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  +  K+ +SW++++  +A N +  EA  L   M L   ++PD  T+++++  C D 
Sbjct: 184 RVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDL-EGLKPDRVTLISVLDACGDL 242

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNS 350
              ++   +H   +   L  D+++ N+L+  Y K   L +A ++F  +   + D+++WN+
Sbjct: 243 RASKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNA 302

Query: 351 MIS------------GLFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           MIS            G+F+ ML   +   S +T+ AIL +C     L  G+ IHC    +
Sbjct: 303 MISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAAC---LDLGSGRRIHCLAASI 359

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  ++     +L+ MY  C   + +   L           WN +I AC Q G   EA + 
Sbjct: 360 GVESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQEL 419

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           FK+M    +  PD  T  ++++ C +L+L   G+ LH     + +     V  AL+ MY 
Sbjct: 420 FKAM----DVEPDGFTFASLLAVCCDLDL---GRRLHAGIATARLASRLIVDTALVGMYS 472

Query: 518 RCRDIKSASTVFESCYNCNLC-------------------TWNCMISAFSQNKAEVRALE 558
           RC  +  A+ VFE   + + C                   +WN MISA++ +     A+ 
Sbjct: 473 RCGSLGDAAAVFEGMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIA 532

Query: 559 LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            +R ++  P+E +IVS L+A + L  L  G  IH     LG    + + S L  M++ C 
Sbjct: 533 TYRAMDCRPDEATIVSALAAASALADLDEGAAIHARALELGIATPA-VESTLASMHAKCG 591

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K   +W++M++AY  HG G EA+ L H M   GI P   ++  +L+
Sbjct: 592 SLDAAMALFEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLA 651

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           +CSH+GL++ G+ Y   +  E+ V  E+EH+  +V++LGR G+L EA   ++ +P++P+P
Sbjct: 652 SCSHAGLLERGMFYVGWLSREHGVAVESEHYRFVVELLGRCGRLGEAEAVVRGMPLEPEP 711

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
            +W  +++AC  H +     + A     L+P +   Y+ L+N+Y A
Sbjct: 712 ALWVTLVAACVLHEEVSRADRAAA---GLDPGDAASYVLLANVYSA 754



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 178/629 (28%), Positives = 303/629 (48%), Gaps = 64/629 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HFFGEMVEEGI 69
           T +L AY+      +          +DVV+WN+M++ C +N   + G    F +M  EG 
Sbjct: 65  TIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGF 124

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D  T + ++        L++GR VH  ++ +GM    ++ N  VNMY KC DL  +  
Sbjct: 125 QPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARR 184

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   + +SW+++++    NN   + +  F+ M   G + D V+L S + A   L  
Sbjct: 185 VFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRA 244

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF--WGMTCKDVVSWNA 247
                 IHA  ++   E    V V N+L+SMY + G +E A   F   G   +DV++WNA
Sbjct: 245 SKQSSQIHARVLEADLERD--VVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNA 302

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +A  G    AF +   M L  +V P  AT+  +++ C D   L  GR +H  A   
Sbjct: 303 MISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLD---LGSGRRIHCLAASI 359

Query: 308 LLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
            +     +  SL+  YS+ S+S++ A  LF  +     LV+WN+MI+             
Sbjct: 360 GVESHPSVAISLLGMYSRCSSSITSARALFLGM-ERKSLVAWNTMIAACAQRGLAAEAQE 418

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LFK M      F+F++LLA+   C+    L+ G+ +H        ++  I   AL+ MY 
Sbjct: 419 LFKAMDVEPDGFTFASLLAV--CCD----LDLGRRLHAGIATARLASRLIVDTALVGMYS 472

Query: 415 NC---GDLVAAFS----------------LLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
            C   GD  A F                 +  RI  + D   WN +I A   +G +++AI
Sbjct: 473 RCGSLGDAAAVFEGMEDRDTCGSLGDAKLVFDRIP-DKDAVSWNSMISAYAHHGRYKDAI 531

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT-RVQNALIT 514
            T+++M    +  PD  T+V+ ++A   L    EG ++H  AL+  +G+ T  V++ L +
Sbjct: 532 ATYRAM----DCRPDEATIVSALAAASALADLDEGAAIHARALE--LGIATPAVESTLAS 585

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           M+ +C  + +A  +FE     +L +WN M++A++Q+     AL L   +E E   PN ++
Sbjct: 586 MHAKCGSLDAAMALFEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVT 645

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           +  +L++C+  G+L  G      +F++G+
Sbjct: 646 LSGVLASCSHAGLLERG------MFYVGW 668



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 259/557 (46%), Gaps = 48/557 (8%)

Query: 7   LPT-STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           LPT +  ++  Y      E +  +F     K+ ++W++++ A  +N      +  F  M 
Sbjct: 162 LPTVANCVVNMYGKCDDLEEARRVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMD 221

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG++ D  TL+ ++ A   +   KQ   +H   ++A +  D  + N  V+MY K G L 
Sbjct: 222 LEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLE 281

Query: 126 SSECTFS--GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            +   F   G    D ++WN ++S   H  +  +    FR M        + +  SA+ A
Sbjct: 282 QATVIFETMGEKSRDVIAWNAMISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILA 341

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDV 242
            ACL +L  G+ IH L   +G E  P V++  SL+ MYS+C   I +A   F GM  K +
Sbjct: 342 -ACL-DLGSGRRIHCLAASIGVESHPSVAI--SLLGMYSRCSSSITSARALFLGMERKSL 397

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V+WN +I   A  G   EA +L   M     VEPD  T  +L+++C D   L  GR +H 
Sbjct: 398 VAWNTMIAACAQRGLAAEAQELFKAMD----VEPDGFTFASLLAVCCD---LDLGRRLHA 450

Query: 303 YAIRRLLGYDLLMMNSLMDFYSK-------------------SNSLSKAELLFNAIAPMN 343
                 L   L++  +L+  YS+                     SL  A+L+F+ I P  
Sbjct: 451 GIATARLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCGSLGDAKLVFDRI-PDK 509

Query: 344 DLVSWNSMIS-----GLFKEML----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           D VSWNSMIS     G +K+ +     +  +   +T+++ L + ++   L+ G +IH   
Sbjct: 510 DAVSWNSMISAYAHHGRYKDAIATYRAMDCRPDEATIVSALAAASALADLDEGAAIHARA 569

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           L+LG +   +  + L  M+  CG L AA +L ++ +   D   WN ++ A  Q+G   EA
Sbjct: 570 LELGIATPAVE-STLASMHAKCGSLDAAMALFEK-NREKDLVSWNAMVAAYAQHGDGSEA 627

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG-LALKSLMGLDTRVQNALI 513
           +     M + +  SP+ VTL  V+++C +  L   G    G L+ +  + +++     ++
Sbjct: 628 LALIHRM-ELEGISPNGVTLSGVLASCSHAGLLERGMFYVGWLSREHGVAVESEHYRFVV 686

Query: 514 TMYGRCRDIKSASTVFE 530
            + GRC  +  A  V  
Sbjct: 687 ELLGRCGRLGEAEAVVR 703


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 194/607 (31%), Positives = 315/607 (51%), Gaps = 40/607 (6%)

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDL 264
           D P+      L+ +Y  C +++ A   F  M    K+VV WN +I  +A NG +EEA DL
Sbjct: 51  DVPF----EKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDL 106

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            ++M L   + P+  T   ++  C+      EGR +H    R  L  ++ +  +L+DFY+
Sbjct: 107 YYKM-LGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYA 165

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQF------SFSTLL 372
           K   L  A+ +F+ +    D+V+WNSMISG       + E+  L  Q       + ST++
Sbjct: 166 KCGCLDDAKEVFDKMHK-RDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIV 224

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +LP+     SL  GK IH + ++ GF  + +    ++ +Y  C  +  A  +   +   
Sbjct: 225 GVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIV 284

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKS--MTQQQNASPDSVTLVNVISACGNLELAFEG 490
            +   W+ ++ A       +EA++ F    M +       +VTL  VI  C NL     G
Sbjct: 285 KNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG 344

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
             LH  A+KS   LD  V N L++MY +C  I  A   F      +  ++  +IS + QN
Sbjct: 345 TCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN 404

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                 L +F  ++     P + ++ S+L AC  L  L +G   H +    GF  ++ I 
Sbjct: 405 GNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMIC 464

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+DMY+ C               +   +W++MI AYG HG G EA+ LF  M + G++
Sbjct: 465 NALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLK 524

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   + I L+SACSHSGLV EG  ++N M +++ + P  EH+ C+VD+L R+G  +E + 
Sbjct: 525 PDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHS 584

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
           FI+ +P++P   VWGA+LSAC  + + ++G+ V++ + KL PE+ G ++ LSNMY A+GR
Sbjct: 585 FIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGR 644

Query: 773 WKDAVEI 779
           W DA ++
Sbjct: 645 WDDAAQV 651



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 234/472 (49%), Gaps = 22/472 (4%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           K+VV WN +I A   N      +  + +M+  GI  +  T   ++ A + +    +GR +
Sbjct: 82  KNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREI 141

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNY 154
           HC   +  + ++  +    V+ YAKCG L+ ++  F  MH  D V+WN+++SG  LH   
Sbjct: 142 HCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGS 201

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            ++      +M  +    ++ ++   + A A +  L +GK IH   ++ G+     V V 
Sbjct: 202 YDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD--VVVG 258

Query: 215 NSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             ++ +Y +C  I+ A R F  M   K+ V+W+A++  + +     EA +L  ++ +++ 
Sbjct: 259 TGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKD 318

Query: 274 --VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             +     T+ T+I +CA+   L  G  +H YAI+     DL++ N+L+  Y+K   ++ 
Sbjct: 319 DVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIING 378

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A   FN +  + D VS+ ++ISG            +F EM         +TL ++LP+C 
Sbjct: 379 AMRFFNEM-DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACA 437

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               L +G   HC+ +  GF+ +T+  NAL+ MY  CG +  A  +  R+ H      WN
Sbjct: 438 HLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRM-HKRGIVSWN 496

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
            +I+A   +G   EA+  F +M Q +   PD VT + +ISAC +  L  EGK
Sbjct: 497 TMIIAYGIHGIGLEALLLFDNM-QSEGLKPDDVTFICLISACSHSGLVAEGK 547



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 153/302 (50%), Gaps = 7/302 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLH 59
           RGF+  +   T +L  Y      + +  +F      K+ VTW+AM+ A V    +   L 
Sbjct: 249 RGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALE 308

Query: 60  FFGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            F +++   ++ I   + TL  ++     +  L  G  +HC +IK+G + D  + N  ++
Sbjct: 309 LFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLS 368

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYAKCG +N +   F+ M   D VS+  I+SG + N   E+ L  F EM  SG   +  +
Sbjct: 369 MYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKAT 428

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L+S + A A L  L YG   H   I  G+  +    + N+LI MY++CG I+ A + F  
Sbjct: 429 LASVLPACAHLAGLHYGSCSHCYAIICGF--TADTMICNALIDMYAKCGKIDTARKVFDR 486

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  + +VSWN +I  + ++G   EA  L   MQ    ++PD  T + LIS C+ S L+ E
Sbjct: 487 MHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQ-SEGLKPDDVTFICLISACSHSGLVAE 545

Query: 297 GR 298
           G+
Sbjct: 546 GK 547



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 229/508 (45%), Gaps = 44/508 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ST+L+  Y+     + +  +F +   +DVV WN+MI+    +      +      ++  
Sbjct: 156 VSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND 215

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  +S+T++ ++ A+ Q+N L+ G+ +H   ++ G + D  +    +++Y KC  ++ + 
Sbjct: 216 VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYAR 275

Query: 129 CTFSGMH-CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNVSLSSAVAAS 184
             F  M    + V+W+ ++   +  ++  + L  F ++    +       V+L++ +   
Sbjct: 276 RIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVC 335

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L +LS G  +H   IK G+     + V N+L+SMY++CG I  A R F  M  +D VS
Sbjct: 336 ANLTDLSTGTCLHCYAIKSGFVLD--LMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVS 393

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           + AII G+  NG  EE   +  EMQL   + P+ AT+ +++  CA    L  G   H YA
Sbjct: 394 FTAIISGYVQNGNSEEGLRMFLEMQL-SGINPEKATLASVLPACAHLAGLHYGSCSHCYA 452

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM-----ISGLFKEM 359
           I      D ++ N+L+D Y+K   +  A  +F+ +     +VSWN+M     I G+  E 
Sbjct: 453 IICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK-RGIVSWNTMIIAYGIHGIGLEA 511

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L L              T + ++ +C+    +  GK    W           G+   M  
Sbjct: 512 LLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKY---W---FNAMTQDFGIIPRMEH 565

Query: 413 YINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
           Y    DL++         S ++++    D   W  ++ AC   +N    E +       +
Sbjct: 566 YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVS-----KK 620

Query: 464 QQNASPDS----VTLVNVISACGNLELA 487
            Q   P+S    V L N+ SA G  + A
Sbjct: 621 IQKLGPESTGNFVLLSNMYSAVGRWDDA 648



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 32/207 (15%)

Query: 575 ILSACTQLGVLRHGKQIHGHV---FHLGFQEN----SFISSALLDMYSNC---------- 617
           +L +C Q   L  GK IH H+    H   + N          L+D+Y  C          
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K+   W+ +I AY ++G   EAI+L+++M   GI P + +   +L ACS    
Sbjct: 75  DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
             EG + + ++     +R E+  +V   +VD   + G L +A E    +  +     W +
Sbjct: 135 ASEGREIHCDIKR---LRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH-KRDVVAWNS 190

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPE 755
           M+S  S H  +    +VA LL +++ +
Sbjct: 191 MISGFSLHEGSY--DEVARLLVQMQND 215


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 180/562 (32%), Positives = 301/562 (53%), Gaps = 34/562 (6%)

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++ G+A +   + A      M+   SV P +     L+ LC D+  L+ G+ +HG  I  
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMK-HDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL 362
              ++L  M  +++ Y+K   ++ A  +F+ + P  DLV WN+MISG       K  L L
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRM-PERDLVCWNTMISGYAQNGFAKVALML 118

Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
             + S         T+++ILP+      L  G ++H + L+ GF +      AL+ MY  
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG +  A  +   + H +  S WN +I    Q+G  + A+  F+ M  +    P +VT++
Sbjct: 179 CGSVSIARVIFDGMDHRTVVS-WNSMIDGYVQSGDAEGAMLIFQKMLDE-GVQPTNVTVM 236

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
             + AC +L     GK +H L  +  +  D  V N+LI+MY +C+ +  A+ +F++  N 
Sbjct: 237 GALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
            L +WN MI  ++QN     AL  F  ++    +P+  ++VS++ A  +L + R  K IH
Sbjct: 297 TLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKS-----------NA----AWSSMISAYGYHGKGW 637
           G V      +N F+ +AL+DMY+ C +           NA     W++MI  YG HG G 
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGK 416

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
            ++ELF EM    I+P   + +  LSACSHSGLV+EGL ++ +M ++Y + P  +H+  +
Sbjct: 417 TSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAM 476

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G+L +A++FI+ +PI+P   V+GAML AC  H +  +G++ A  +FKL P++ 
Sbjct: 477 VDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
           GY++ L+N+Y     W    ++
Sbjct: 537 GYHVLLANIYATASMWGKVAKV 558



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +L   T ++  Y+       +  +F     +D+V WN MI+   +N    + L   
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M EEG R DS T++ I+ A+     L+ G  VH   ++AG  +  ++    V+MY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F GM     VSWN+++ G + +   E  +L F++M   G Q  NV++  A+
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG+L  GK +H L  +L  +    VSV NSLISMYS+C  ++ A   F  +  K 
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSD--VSVMNSLISMYSKCKRVDIAADIFKNLRNKT 297

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA+I G+A NG   EA +   EMQ  R+++PD  T+V++I   A+  + R+ + +H
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQ-SRNIKPDSFTMVSVIPALAELSIPRQAKWIH 356

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  IRR L  ++ +M +L+D Y+K  ++  A  LF+ +   + +++WN+MI G       
Sbjct: 357 GLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARH-VITWNAMIDGYGTHGLG 415

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNA 408
                LFKEM     + +  T L  L +C+    +E G       +   G         A
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGA 475

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G L  A+  +Q++      + +  ++ AC
Sbjct: 476 MVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGAC 512



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 238/523 (45%), Gaps = 26/523 (4%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L FF  M  + +R        ++      + LK+G+ +H   I +G   +       VNM
Sbjct: 15  LSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNM 74

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKC  +N +   F  M   D V WNT++SG   N + +  L+    M   G + D++++
Sbjct: 75  YAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITI 134

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S + A A    L  G  +H   ++ G+E    V+V+ +L+ MYS+CG +  A   F GM
Sbjct: 135 VSILPAVADTRLLRIGMAVHGYVLRAGFE--SLVNVSTALVDMYSKCGSVSIARVIFDGM 192

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             + VVSWN++IDG+  +G  E A  +  +M L   V+P   TV+  +  CAD   L  G
Sbjct: 193 DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKM-LDEGVQPTNVTVMGALHACADLGDLERG 251

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + VH    +  L  D+ +MNSL+  YSK   +  A  +F  +     LVSWN+MI G   
Sbjct: 252 KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN-KTLVSWNAMILGYAQ 310

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F EM     +    T+++++P+          K IH   ++     N   
Sbjct: 311 NGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFV 370

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           + AL+ MY  CG +  A  L   ++     + WN +I     +G  + +++ FK M ++ 
Sbjct: 371 MTALVDMYAKCGAIHTARKLFDMMNARHVIT-WNAMIDGYGTHGLGKTSVELFKEM-KKG 428

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
              P+ +T +  +SAC +  L  EG      ++K   G++  + +  A++ + GR   + 
Sbjct: 429 TIKPNDITFLCALSACSHSGLVEEGLCFFE-SMKKDYGIEPTMDHYGAMVDLLGRAGRLN 487

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFR 561
            A    +       +  +  M+ A   +K     E  A E+F+
Sbjct: 488 QAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFK 530


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 200/625 (32%), Positives = 310/625 (49%), Gaps = 36/625 (5%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSP-YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
           A    L+  K++H   I  G   SP ++ + + L   Y+ CG +  A + F  ++   + 
Sbjct: 90  AATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLF 149

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            WNAII  +   G   +A  +   M       PD  T   +I  C+   +L  G  +HG 
Sbjct: 150 LWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGR 209

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+      ++ + NSL+  Y     +  A  +FN +     +VSWN+MISG         
Sbjct: 210 ALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLK-RSVVSWNTMISGWFQNGRPEE 268

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F  M+    +   +T+++ LPSC   + LE G  +H    K          NAL+ 
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A SL+   +   D   W  +I     NG+ + A+    +M Q     P++
Sbjct: 329 MYSRCGGMDEA-SLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAM-QLDGVVPNA 386

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VTL +++SAC +L    +GKSLH   ++  +  D  V  ALI MY +C  +  +  VF  
Sbjct: 387 VTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAK 446

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
                   WN ++S    N+    A+ LF+ +   E E N  +  S++ A   L  L+  
Sbjct: 447 TSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQV 506

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYG 631
             +H ++   GF     + + L+DMYS C                 K    WS +I+ YG
Sbjct: 507 MNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYG 566

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG G  A+ LF++M +SG++P + +  S+L ACSH GLVD+GL  +  M+E Y   P  
Sbjct: 567 MHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLP 626

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            H+ C+VD+LGR+G+L EAY+ IK++P Q    +WGA+L AC  H + ++G+  AE LF+
Sbjct: 627 NHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFE 686

Query: 752 LEPENVGYYISLSNMYVALGRWKDA 776
           LEPE+ G YI L+N+Y A+GRWKDA
Sbjct: 687 LEPESTGNYILLANIYAAVGRWKDA 711



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 283/584 (48%), Gaps = 34/584 (5%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           HLP+   L  +Y+       +  LF +  +  +  WNA+I   V+       L  F  M+
Sbjct: 118 HLPSH--LAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMI 175

Query: 66  EEGIRF-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             G  + D  T  +++ A + M+ L  G ++H  ++ +G  ++  + N  + MY  CG +
Sbjct: 176 CSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKV 235

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F+ M     VSWNT++SG   N  PE+ L  F  M  +  + D+ ++ SA+ + 
Sbjct: 236 GLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC 295

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             L EL  G  +H L  K   ++   + V N+L+ MYS+CG ++ A   F     KDV++
Sbjct: 296 GHLKELELGIKVHKLVQKNHLQEK--IEVRNALVDMYSRCGGMDEASLVFAETKEKDVIT 353

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W ++I+G+ +NG  + A  L   MQL   V P+  T+ +L+S CA    L++G+S+H + 
Sbjct: 354 WTSMINGYIMNGNAKSALALCPAMQL-DGVVPNAVTLASLLSACASLCCLKQGKSLHAWV 412

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
           +R+ L  D+L++ +L+D Y+K N++S +  +F A   M   V WN+++S           
Sbjct: 413 MRKKLDSDVLVVTALIDMYAKCNAVSYSFQVF-AKTSMKRTVPWNALLSGLIHNELAREA 471

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            GLFK ML    + + +T  +++P+      L+   ++H + ++ GF +    +  L+ M
Sbjct: 472 VGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDM 531

Query: 413 YINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG L  A  +   I +   D   W+++I     +GH + A+  F  M       P+ 
Sbjct: 532 YSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMV-HSGMQPNE 590

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN---ALITMYGRCRDIKSASTV 528
           +T  +V+ AC +  L  +G +L    +++     + + N    ++ + GR   +  A  +
Sbjct: 591 ITFTSVLHACSHRGLVDDGLTLFKYMIENYPS--SPLPNHYTCVVDLLGRAGRLDEAYDL 648

Query: 529 FESC-YNCNLCTWNCMISA--FSQNK--AEVRALELFRHLEFEP 567
            +S  +  N   W  ++ A    QN    EV A  LF   E EP
Sbjct: 649 IKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLF---ELEP 689



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/498 (23%), Positives = 230/498 (46%), Gaps = 22/498 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++    SLL  Y N      +  +F     + VV+WN MI+   +N      L  F
Sbjct: 214 GFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVF 273

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M++  +  DS T++  + +   +  L+ G  VH L  K  +     + N  V+MY++C
Sbjct: 274 NSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRC 333

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F+     D ++W ++++G + N   +  L     M   G   + V+L+S +
Sbjct: 334 GGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLL 393

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  L  GK +HA  ++   +    V V  +LI MY++C  +  + + F   + K 
Sbjct: 394 SACASLCCLKQGKSLHAWVMRKKLDSD--VLVVTALIDMYAKCNAVSYSFQVFAKTSMKR 451

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V WNA++ G   N    EA  L   M L+  VE + AT  ++I   A    L++  ++H
Sbjct: 452 TVPWNALLSGLIHNELAREAVGLFKSM-LIEEVEANHATFNSVIPAYAILADLKQVMNLH 510

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG------ 354
            Y +R      + ++  L+D YSK  SL  A  +F+ I     D++ W+ +I+G      
Sbjct: 511 SYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGH 570

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG--V 406
                 LF +M++   Q +  T  ++L +C+    ++ G ++  + ++  + ++ +    
Sbjct: 571 GETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIE-NYPSSPLPNHY 629

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQ 464
             ++ +    G L  A+ L++ +    + S W  ++ AC   QN    E +   +    +
Sbjct: 630 TCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGE-VAAERLFELE 688

Query: 465 QNASPDSVTLVNVISACG 482
             ++ + + L N+ +A G
Sbjct: 689 PESTGNYILLANIYAAVG 706


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 200/604 (33%), Positives = 321/604 (53%), Gaps = 47/604 (7%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+VT  L    S    I+ A   F  +   D+  +N +I  F+LN     A  L   ++ 
Sbjct: 43  VTVTK-LTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRK 101

Query: 271 MRSVEPD---IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
              +EPD    A V++  S     LLL     V G+      G DL + ++++  Y K +
Sbjct: 102 STPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGF------GSDLFVGSAIVACYFKFS 155

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAIL 375
            ++ A  +F+ +    D V WN+M+SGL            F +M+     F  +T+ A+L
Sbjct: 156 RVAAARKVFDGMLE-RDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVL 214

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           P     + L  G  I C  +K+GF ++   +  L  +Y  CG++  A  L  +I    D 
Sbjct: 215 PGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ-PDL 273

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             +N +I   T N   + +++ FK +  + ++  S   V L+ V    G+L L    + +
Sbjct: 274 VSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLT---RCI 330

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG   KS +  ++ V  AL T+Y R  +I+SA  +F+     +L +WN MIS ++QN   
Sbjct: 331 HGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLT 390

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            +A+ LF+ +   E  PN +++ SILSAC QLG L  GK +H  +    F+ N F+S+AL
Sbjct: 391 EKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTAL 450

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               K+   W++MIS YG HG G EA+ LF+EM +S + PT 
Sbjct: 451 IDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTG 510

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + +S+L ACSH+GLV EG + + +M+ ++   P  EH+ C+VD+LGR+G L +A +FI+
Sbjct: 511 VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIR 570

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P++P P VWGA+L AC  H D  + +  ++ LF+L+P+NVGYY+ LSN+Y A   + +
Sbjct: 571 KMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPE 630

Query: 776 AVEI 779
           A  +
Sbjct: 631 AASV 634



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 226/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L   ++++  Y   S   ++  +F     +D V WN M++  V+N C    +  F
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G+MV+ GI FDSTT+  ++  + ++  L  G  + CL++K G  + + +      +Y+KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ ++   F  +   D VS+N ++SG   NN  E  +  F+E+  SGE+ ++ S+   +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                 G L   + IH    K G   +   SV+ +L ++YS+  +IE+A   F   + K 
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSN--SSVSTALTTVYSRLNEIESARLLFDESSEKS 373

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + SWNA+I G+A NG  E+A  L  EMQ    V P+  TV +++S CA    L  G+ VH
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCE-VRPNPVTVTSILSACAQLGALSLGKWVH 432

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               R     ++ +  +L+D Y+K  S+++A+ LF ++ P  + V+WN+MISG       
Sbjct: 433 DLINRESFESNIFVSTALIDMYAKCGSITEAQRLF-SMMPEKNAVTWNAMISGYGLHGYG 491

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNA 408
                LF EML+     +  T L++L +C+    +  G  I    +   GF         
Sbjct: 492 HEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYAC 551

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G+L  A   ++++        W  ++ AC
Sbjct: 552 MVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGAC 588



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 232/500 (46%), Gaps = 22/500 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L T T L    S++   + +  LF    N D+  +N +I A   N      +  +  + +
Sbjct: 42  LVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRK 101

Query: 67  E-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
              +  D+ T   ++S  + +            SI AG  +D  + +  V  Y K   + 
Sbjct: 102 STPLEPDNFTYAFVISGASSLGLGLLLHAH---SIVAGFGSDLFVGSAIVACYFKFSRVA 158

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           ++   F GM   DTV WNT++SG + N+  ++ +L F +M   G   D+ ++++ +   A
Sbjct: 159 AARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVA 218

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L +L+ G  I  L +K+G+    Y  V   L  +YS+CG+IE A   F  +   D+VS+
Sbjct: 219 ELQDLALGMGIQCLAMKVGFHSHAY--VITGLACLYSKCGEIETARLLFGQIGQPDLVSY 276

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA+I G+  N + E +  L  E+ L+   + + +++V LI +      L   R +HG+  
Sbjct: 277 NAMISGYTCNNETESSVRLFKEL-LVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCT 335

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +  +  +  +  +L   YS+ N +  A LLF+  +    L SWN+MISG           
Sbjct: 336 KSGVVSNSSVSTALTTVYSRLNEIESARLLFDE-SSEKSLASWNAMISGYAQNGLTEKAI 394

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF+EM     + +  T+ +IL +C    +L  GK +H    +  F +N     AL+ MY
Sbjct: 395 SLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMY 454

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  L   +   +  + WN +I     +G+  EA+  F  M   +  SP  VT
Sbjct: 455 AKCGSITEAQRLFSMMPEKNAVT-WNAMISGYGLHGYGHEALNLFNEMLHSR-VSPTGVT 512

Query: 474 LVNVISACGNLELAFEGKSL 493
            ++V+ AC +  L  EG  +
Sbjct: 513 FLSVLYACSHAGLVREGDEI 532



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 197/479 (41%), Gaps = 47/479 (9%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L +    H   I   L  DL+ +  L    S   ++ +A LLF+ I P  DL  +N +I 
Sbjct: 23  LHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI-PNPDLFLYNVLIR 81

Query: 354 GLF-----KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI------------HCWQLK 396
                      + L +    ST L        P++  +   I            H   + 
Sbjct: 82  AFSLNNSPSSAVSLYTHLRKSTPL-------EPDNFTYAFVISGASSLGLGLLLHAHSIV 134

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF ++    +A++  Y     + AA  +   +    DT  WN ++    +N  F EAI 
Sbjct: 135 AGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLER-DTVLWNTMVSGLVKNSCFDEAIL 193

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M  +     DS T+  V+     L+    G  +  LA+K        V   L  +Y
Sbjct: 194 IFGDMV-KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIV 573
            +C +I++A  +F      +L ++N MIS ++ N     ++ LF+ L     + N  SIV
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
            ++      G L   + IHG     G   NS +S+AL  +YS                 K
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           S A+W++MIS Y  +G   +AI LF EM    +RP   +V S+LSAC+  G +  G ++ 
Sbjct: 373 SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG-KWV 431

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           ++++              ++DM  + G + EA      +P +     W AM+S    HG
Sbjct: 432 HDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGYGLHG 489


>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
 gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
          Length = 847

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 232/805 (28%), Positives = 390/805 (48%), Gaps = 61/805 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y        ++A+F+    K+V TW  +I A   N      +  F EM   G++ D
Sbjct: 36  LIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSD 95

Query: 73  STTLLIIVSALTQMNC--LKQGRVVHCLSIKAGMIADSS---LCNV-FVNMYAKCGDLNS 126
             T   I+ A + +    L  G+ +H    + G+   S+   +C+   ++ YA+ G +  
Sbjct: 96  EFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQ 155

Query: 127 SECTFSGMHC----ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           +   F  M       D ++W  +M+      +  + LL FR+M   G + D  +  +A+ 
Sbjct: 156 AAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAID 215

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A + +  L  G V+H+  +    E    V   N+L++ Y++ G +  +   F  M  K+V
Sbjct: 216 ACSSIPSLEQGTVLHSRLLASSVECDGVVG--NALLNFYAKAGLVHESRSLFSSMKVKNV 273

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE---GRS 299
           V+W+AI+  +A NG  E A +L  EM L+  V P+  T V+L+  C+ + L+++   GR 
Sbjct: 274 VTWSAIVAAYAQNGHHEPAVELFREM-LLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRK 332

Query: 300 VHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
           +H   ++      D+++  +L++ Y +  S+S A+ +F+ +   N + SWN+M+      
Sbjct: 333 IHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRN-ITSWNAMLVTYSLN 391

Query: 359 MLYLCSQFSFSTLL----AILP----------SCNSPESLEFGKSIHCWQLKLGFSNNTI 404
              L +   F T+L     + P          +C     L     IH    +   SN T 
Sbjct: 392 QRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTD 451

Query: 405 GV--NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            V  +AL+ MY NC  L  A  +L ++   +  S W  +I+AC QN   + AI+ +++M 
Sbjct: 452 VVLGSALIKMYGNCRRLADAAQVLDQMPRTNVIS-WTSMILACEQNEDNEAAIRVYRAM- 509

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           Q     PD VT+V VI A  NL     G   H  A        T V NAL+T+YG   D+
Sbjct: 510 QLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDL 569

Query: 523 KSASTVFESCYNC---NLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSIL 576
           ++A  VF+        ++ TWN M+SA++QN    +AL  F+   H    P++ + V+IL
Sbjct: 570 QAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNIL 629

Query: 577 SACT-QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           +AC      L  G +IH      G   +  +++ LL MYS C               K+ 
Sbjct: 630 NACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNV 689

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            +WS+M +A  ++G    A++ F  M + GI+P   + IS+LS CSH+GL+DE + Y   
Sbjct: 690 VSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYA 749

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M  +++++P  +H+ C++D+L R+GK   A E   +L   P P  W ++L AC  HGD +
Sbjct: 750 MSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHL---PNPVAWNSLLGACLVHGDAE 806

Query: 741 MGKQVAELLFKLEPENVGYYISLSN 765
              + A+   KL+P +   Y+SLSN
Sbjct: 807 TAARAADTAAKLQPLDCAPYVSLSN 831



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 193/734 (26%), Positives = 342/734 (46%), Gaps = 70/734 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH   I +G   D  LCN+ + MY +C  ++ +   F  +   +  +W  ++  
Sbjct: 11  LDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVA 70

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHAL----GIK 202
             HN    + +  FREM   G Q+D  + S+ + A + LG   LS GK IH+     G+K
Sbjct: 71  HTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLK 130

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK----DVVSWNAIIDGFALNGKF 258
           L    +P V  + ++I  Y+Q G IE A   F  M  +    D+++W A++  +   G  
Sbjct: 131 L--TSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLGHA 188

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            EA  L  +M L + +EPD    V  I  C+    L +G  +H   +   +  D ++ N+
Sbjct: 189 REALLLFRKMDL-QGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++FY+K+  + ++  LF+++   N +V+W+++++             LF+EML      
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKN-VVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAP 306

Query: 367 SFSTLLAILPSCNSP---ESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAA 422
           +  T +++L SC+     + L  G+ IH   LK    + + +   AL++MY  CG +  A
Sbjct: 307 NKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDA 366

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVISAC 481
            ++   + H + TS WN ++V  + N    EA++ F++M  + +   PD++T V+   AC
Sbjct: 367 KTVFDEMQHRNITS-WNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADAC 425

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           G +        +H    +S     T V   +ALI MYG CR +  A+ V +     N+ +
Sbjct: 426 GMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVIS 485

Query: 540 WNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  MI A  QN+    A+ ++R ++    +P+ +++V+++ A   L  L+ G + H    
Sbjct: 486 WTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAA 545

Query: 597 HLGFQENSFISSALLDMY------------------SNCKSNAAWSSMISAYGYHGKGWE 638
             GF  ++ + +AL+ +Y                   + +    W+SM+SA+  +G   +
Sbjct: 546 AFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQ 605

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHS------GLVDEGLQYYNNMLEEYDVRPETE 692
           A+  F  M + G  P K++ +++L+AC+        G+    L     +  + DV     
Sbjct: 606 ALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLL 665

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK- 751
           H      M  R G L  A +    L  Q     W AM +AC+H+GD     Q    +   
Sbjct: 666 H------MYSRCGNLSRARKVFHAL-TQKNVVSWSAMAAACAHNGDADGALQAFRGMLHG 718

Query: 752 -LEPENVGYYISLS 764
            ++P  V +   LS
Sbjct: 719 GIQPNAVTFISILS 732



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 258/589 (43%), Gaps = 57/589 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+       S +LF     K+VVTW+A++ A  +N      +  F EM+ +G+  
Sbjct: 247 ALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAP 306

Query: 72  DSTTLLIIVSALTQMNCLK---QGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSS 127
           +  T + ++ + +    +K   +GR +H   +K+   A D  +    VNMY +CG ++ +
Sbjct: 307 NKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDA 366

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASA 185
           +  F  M   +  SWN ++     N    + L +FR M   GE  + D ++  SA  A  
Sbjct: 367 KTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACG 426

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +G+LS    IH+   +    +   V + ++LI MY  C  +  A +    M   +V+SW
Sbjct: 427 MMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISW 486

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            ++I     N   E A  +   MQL    +PD  T+VT+I   A+   L+ G   H  A 
Sbjct: 487 TSMILACEQNEDNEAAIRVYRAMQL-HGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAA 545

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI--APMNDLVSWNSMIS---------- 353
                   ++ N+L+  Y  S  L  AE +F  +    + D+V+WNSM+S          
Sbjct: 546 AFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQ 605

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
             G F+ ML+       +T + IL +C   P  L  G  IH      G  ++    N L+
Sbjct: 606 ALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGLDSDIDVANTLL 665

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           HMY  CG+L  A  +   ++  +  S W+ +  AC  NG    A++ F+ M       P+
Sbjct: 666 HMYSRCGNLSRARKVFHALTQKNVVS-WSAMAAACAHNGDADGALQAFRGML-HGGIQPN 723

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +VT ++++S C +  L  E  S +  A+ S   L   VQ+                    
Sbjct: 724 AVTFISILSGCSHTGLMDEAVS-YLYAMSSDHNLKPTVQH-------------------- 762

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                    + C++   ++     RA EL  HL   PN ++  S+L AC
Sbjct: 763 ---------YACLLDLLARAGKFHRAEELATHL---PNPVAWNSLLGAC 799



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 178/380 (46%), Gaps = 34/380 (8%)

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++L+ G+++H   +  G+  +    N L+ MY  C  +  A ++   +S   +   W I+
Sbjct: 9   KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVS-RKNVFTWTIL 67

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF--EGKSLHGLALK 499
           IVA T NG F EA++ F+ M        D  T   ++ AC NL LAF   GK++H    +
Sbjct: 68  IVAHTHNGLFFEAVELFREM-DVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQ 126

Query: 500 SLMGLDTRV----QNALITMYGRCRDIKSASTVFE----SCYNCNLCTWNCMISAFSQNK 551
             + L +        A+I  Y +   I+ A+ +FE       + +L  W  M++A++Q  
Sbjct: 127 QGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAYNQLG 186

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL LFR ++    EP+  + V+ + AC+ +  L  G  +H  +     + +  + +
Sbjct: 187 HAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGN 246

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           ALL+ Y+                 K+   WS++++AY  +G    A+ELF EM   G+ P
Sbjct: 247 ALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAP 306

Query: 654 TKSSVISLLSACSHSGLVDE---GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
            K + +SLL +CSH+GL+ +   G + +  +L+      +      +V+M GR G + +A
Sbjct: 307 NKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDA 366

Query: 711 YEFIKNLPIQPKPGVWGAML 730
                 +        W AML
Sbjct: 367 KTVFDEMQ-HRNITSWNAML 385



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 183/390 (46%), Gaps = 24/390 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV--EE 67
           +T+L+  Y        +  +F E  ++++ +WNAM+     N+  +  L FF  M+   E
Sbjct: 350 ATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGE 409

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA--GMIADSSLCNVFVNMYAKCGDLN 125
           G++ D+ T +    A   M  L +   +H    ++      D  L +  + MY  C  L 
Sbjct: 410 GVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLA 469

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +      M   + +SW +++  C  N   E  +  +R M   G + D V++ + + A+A
Sbjct: 470 DAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAA 529

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TCKDV 242
            L +L  G   HA     G+  S  V   N+L+++Y   GD++AAE  F  +   + +DV
Sbjct: 530 NLHDLKRGIEFHAQAAAFGFATSTVVG--NALVTLYGTSGDLQAAENVFKELLQQSVEDV 587

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA-DSLLLREGRSVH 301
           V+WN+++  +  NG   +A      M L     PD  T V +++ CA D   L +G  +H
Sbjct: 588 VTWNSMLSAWNQNGLPNQALGTFQRM-LHHGRHPDKTTFVNILNACAGDPSKLLQGVKIH 646

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             A    L  D+ + N+L+  YS+  +LS+A  +F+A+   N +VSW++M +        
Sbjct: 647 ALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKN-VVSWSAMAAACAHNGDA 705

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCN 379
                 F+ ML+   Q +  T ++IL  C+
Sbjct: 706 DGALQAFRGMLHGGIQPNAVTFISILSGCS 735



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 15/349 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y N      +  +  +    +V++W +MI AC +N      +  +  M   G +
Sbjct: 456 SALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHK 515

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ ++ A   ++ LK+G   H  +   G    + + N  V +Y   GDL ++E  
Sbjct: 516 PDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENV 575

Query: 131 FSGM---HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           F  +      D V+WN+++S    N  P + L  F+ M   G   D  +  + +  +AC 
Sbjct: 576 FKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNIL--NACA 633

Query: 188 GELS---YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           G+ S    G  IHAL    G +    + V N+L+ MYS+CG++  A + F  +T K+VVS
Sbjct: 634 GDPSKLLQGVKIHALAAACGLDSD--IDVANTLLHMYSRCGNLSRARKVFHALTQKNVVS 691

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-VHGY 303
           W+A+    A NG  + A      M L   ++P+  T ++++S C+ + L+ E  S ++  
Sbjct: 692 WSAMAAACAHNGDADGALQAFRGM-LHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAM 750

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +    L   +     L+D  +++    +AE L   +    + V+WNS++
Sbjct: 751 SSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLP---NPVAWNSLL 796



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 13/155 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  + +LL  YS       +  +F+    K+VV+W+AM  AC  N      L  F
Sbjct: 653 GLDSDIDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAF 712

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV------FV 115
             M+  GI+ ++ T + I+S      C   G +   +S    M +D +L          +
Sbjct: 713 RGMLHGGIQPNAVTFISILSG-----CSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLL 767

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           ++ A+ G  + +E      H  + V+WN+++  CL
Sbjct: 768 DLLARAGKFHRAEEL--ATHLPNPVAWNSLLGACL 800


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 317/619 (51%), Gaps = 41/619 (6%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           + H  G+ LG      +     L+S Y+  GD+ +A   F G    D  S+ A++     
Sbjct: 86  LTHPQGLLLGS-----LRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQ 140

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL--CADSLLLREGRSVHGYAIRRLLGYD 312
             +  +A  L H+M+  R         V  ++L  C  S     GRS+H  AI+ + G D
Sbjct: 141 TERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIK-VGGAD 199

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             +MNSL+D Y+K+  L  A  +F  I P  ++VSW SMISG            LF +M 
Sbjct: 200 GFVMNSLVDMYAKAEDLECARKVFERI-PDRNVVSWTSMISGCVQNGFASDGLLLFNKMR 258

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 S  T+  ++ +C++   L  G+ +H   +K G  +N+    AL+ MY+ CG+L 
Sbjct: 259 QDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELD 318

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +S+  D   W  +IV  TQNG+  +A++ F    +  N +P+SVT   V+SA
Sbjct: 319 HARCVFDELSY-IDLVLWTTMIVGYTQNGNPLDALRLFLD-KRFANIAPNSVTTATVLSA 376

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
              L     GKS+HGLA+K  +     V NAL+ MY +C+ +  A  +F    N ++  W
Sbjct: 377 SAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAW 436

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N MIS +++N     AL LF+ +  +   P+ IS+V+ LSA   LG L  GK IHG+   
Sbjct: 437 NSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVK 496

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
             F  N ++ +ALL++Y+ C               +++  W +MI  YG  G    +I L
Sbjct: 497 HAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHL 556

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F EM   G+ P   +  S+LS CSHSG+V  G +Y+++M + +++ P  +H+ C+VD+L 
Sbjct: 557 FGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLA 616

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G L++A EFI N+P+Q    VWGA L  C  H   +  ++  + +  L PE    Y+ 
Sbjct: 617 RAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVL 676

Query: 763 LSNMYVALGRWKDAVEIGK 781
           +SN+Y + G W  ++ I +
Sbjct: 677 ISNLYTSNGMWDKSLAIRR 695



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 238/480 (49%), Gaps = 21/480 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+     E +  +F    +++VV+W +MI+ CV+N     GL  F +M ++ +  
Sbjct: 205 SLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPP 264

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T+  +++A + +  L QGR +H   IK G++++S +    ++MY KCG+L+ + C F
Sbjct: 265 SEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVF 324

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V W T++ G   N  P   L  F +  ++    ++V+ ++ ++ASA L +LS
Sbjct: 325 DELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLS 384

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH L +KLG  +  Y  V N+L+ MY++C  +  A+R F  ++ KDVV+WN++I G
Sbjct: 385 LGKSIHGLAVKLGLVE--YNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISG 442

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI--SLCADSLLLREGRSVHGYAIRRLL 309
           +A N   ++A  L  +M L  S  PD  +VV  +  S+C   LL+  G+S+HGYA++   
Sbjct: 443 YAENNMGDDALMLFKQMSLQGS-SPDAISVVNALSASVCLGDLLI--GKSIHGYAVKHAF 499

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ +  +L++ Y+K   L  A  +F+ +   N  V+W +MI G            LF 
Sbjct: 500 VSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNS-VTWCAMIGGYGMQGDSAGSIHLFG 558

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINC 416
           EML      +     +IL +C+    +  GK            + +      ++ +    
Sbjct: 559 EMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARA 618

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L  A   +  +   +DTS W   +  C  +   Q A +  K M       PD   L++
Sbjct: 619 GNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLIS 678



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 248/541 (45%), Gaps = 61/541 (11%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            L  L   T LL+ Y+ +    S+  +F  T   D  ++ AM+   V+       +    
Sbjct: 93  LLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHH 152

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQ-----GRVVHCLSIKAGMIADSSLCNVFVNM 117
           +M       ++    ++  AL    C++      GR +HC +IK G  AD  + N  V+M
Sbjct: 153 DMRRRRPCPEAQDDFVLSLALKA--CIRSAEYSYGRSLHCDAIKVGG-ADGFVMNSLVDM 209

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK  DL  +   F  +   + VSW +++SGC+ N +    LL F +M          ++
Sbjct: 210 YAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTI 269

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           ++ + A + L  L  G+ +H   IK G   + ++S   +L+ MY +CG+++ A   F  +
Sbjct: 270 ATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISA--ALLDMYVKCGELDHARCVFDEL 327

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +  D+V W  +I G+  NG   +A  L  + +   ++ P+  T  T++S  A    L  G
Sbjct: 328 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFA-NIAPNSVTTATVLSASAQLRDLSLG 386

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +S+HG A++  L    ++ N+L+D Y+K  ++S+A+ +F  I+   D+V+WNSMISG   
Sbjct: 387 KSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISN-KDVVAWNSMISGYAE 445

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LFK+M    S     +++  L +      L  GKSIH + +K  F +N   
Sbjct: 446 NNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYV 505

Query: 406 VNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNI------------------------ 440
             AL+++Y  CGDL++A  +   ++  NS T C  I                        
Sbjct: 506 DTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGV 565

Query: 441 ---------VIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACGNLELAF 488
                    ++  C+ +G      + F SM Q  N +P       +V+V++  GNLE A 
Sbjct: 566 YPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDAL 625

Query: 489 E 489
           E
Sbjct: 626 E 626



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 158/298 (53%), Gaps = 3/298 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G +++   S +LL  Y      + +  +F E    D+V W  MI    +N   +  L  
Sbjct: 295 QGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRL 354

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +     I  +S T   ++SA  Q+  L  G+ +H L++K G++  + + N  V+MYAK
Sbjct: 355 FLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAK 414

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  ++ ++  F  +   D V+WN+++SG   NN  +  L+ F++M   G   D +S+ +A
Sbjct: 415 CQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNA 474

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++AS CLG+L  GK IH   +K  +  + YV    +L+++Y++CGD+ +A R F  M  +
Sbjct: 475 LSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDT--ALLNLYNKCGDLLSARRVFDEMNDR 532

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           + V+W A+I G+ + G    +  L  EM L   V P+     +++S C+ S ++  G+
Sbjct: 533 NSVTWCAMIGGYGMQGDSAGSIHLFGEM-LKDGVYPNDIAFTSILSTCSHSGMVTAGK 589


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 209/629 (33%), Positives = 323/629 (51%), Gaps = 49/629 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +HA  IK     S  V + NSL+++Y++C  +  A+  F  +  KDVVSWN II
Sbjct: 22  LQKGKALHAQIIK---SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78

Query: 250 DGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +G++ +G    +  ++   Q MR+    P+  T   + +  +  +    GR  H  AI+ 
Sbjct: 79  NGYSQHGPSGSSH-VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKM 137

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL 362
               D+ + +SLM+ Y K+    +A  +F+ + P  + VSW +MISG     L  E L L
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTM-PERNSVSWATMISGYASQKLAAEALGL 196

Query: 363 C----------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                      ++F F+++L+ L     PE +  GK IHC  +K G  +     NAL+ M
Sbjct: 197 FRLMRREEEGENEFVFTSVLSAL---TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTM 253

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A    +  S + ++  W+ +I    Q+G   +A+K F SM       P   
Sbjct: 254 YAKCGSLDDALQTFE-TSSDKNSITWSAMITGYAQSGDSDKALKLFSSM-HLSGIRPSEF 311

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFE 530
           T V VI+AC +L  A+EGK +H   LK  +G +++  V  AL+ MY +C  I  A   F+
Sbjct: 312 TFVGVINACSDLGAAWEGKQVHDYLLK--LGFESQIYVMTALVDMYAKCSSIVDARKGFD 369

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  W  MI  + QN     AL L+  +E E   PNE+++ S+L AC+ L  L  
Sbjct: 370 YLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQ 429

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           GKQIH      GF     I SAL  MY+ C               +   +W++MIS    
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQ 489

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G EA+ELF EM   G +P   + +++LSACSH GLV+ G  Y+  M +E+ + P  E
Sbjct: 490 NGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVE 549

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+L R+GKL+EA EF ++  I     +W  +L AC ++ + ++G    E L +L
Sbjct: 550 HYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMEL 609

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
             +    Y+ LS++Y ALGRW+D   + +
Sbjct: 610 GSQESSAYVLLSSIYSALGRWEDVERVRR 638



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 270/557 (48%), Gaps = 30/557 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN----RCVVMGLHFFGEMV 65
           + SL+  Y+       +  +F    NKDVV+WN +I    ++       VM L  F  M 
Sbjct: 43  ANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMEL--FQRMR 100

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            E    ++ T   + +A + +     GR+ H ++IK     D  + +  +NMY K G   
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   ++VSW T++SG        + L  FR M    E+ +N  + ++V ++ 
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE-EEGENEFVFTSVLSAL 219

Query: 186 CLGEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
            L EL + GK IH + +K G      VSV N+L++MY++CG ++ A + F   + K+ ++
Sbjct: 220 TLPELVNNGKQIHCIAVKNGL--LSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSIT 277

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+A+I G+A +G  ++A  L   M L   + P   T V +I+ C+D     EG+ VH Y 
Sbjct: 278 WSAMITGYAQSGDSDKALKLFSSMHL-SGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL 336

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EM 359
           ++      + +M +L+D Y+K +S+  A   F+ +    D+V W SMI G  +     + 
Sbjct: 337 LKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDA 395

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L L  +           T+ ++L +C+S  +LE GK IH   +K GF       +AL  M
Sbjct: 396 LSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTM 455

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L     + +R+    D   WN +I   +QNG  +EA++ F+ M Q +   PD V
Sbjct: 456 YAKCGCLKDGTLVFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEEM-QLEGTKPDYV 513

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T VN++SAC ++ L   G     +      G+D RV++   ++ +  R   +K A    E
Sbjct: 514 TFVNILSACSHMGLVERGWGYFRMMFDEF-GMDPRVEHYACMVDILSRAGKLKEAIEFTE 572

Query: 531 SC-YNCNLCTWNCMISA 546
           S   +  +C W  ++ A
Sbjct: 573 SATIDHGMCLWRIILGA 589



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 256/531 (48%), Gaps = 42/531 (7%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLC----NVFVNMYAKCGDLNSSECTFSGMHCADT 139
           T    L++G+ +H     A +I  SS C    N  VN+YAKC  L  ++  F  +   D 
Sbjct: 17  THNRSLQKGKALH-----AQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDV 71

Query: 140 VSWNTIMSGCLHNNY--PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           VSWN I++G   +        +  F+ M       +  + +    A++ L + + G++ H
Sbjct: 72  VSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAH 131

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A+ IK+  +    V V +SL++MY + G    A + F  M  ++ VSW  +I G+A    
Sbjct: 132 AVAIKM--DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKL 189

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAIRRLLGYDLLM 315
             EA  L    +LMR  E      V    L A +L  L+  G+ +H  A++  L   + +
Sbjct: 190 AAEALGLF---RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            N+L+  Y+K  SL  A   F   +  N  ++W++MI+G            LF  M    
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNS-ITWSAMITGYAQSGDSDKALKLFSSMHLSG 305

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA- 422
            + S  T + ++ +C+   +   GK +H + LKLGF +    + AL+ MY  C  +V A 
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365

Query: 423 --FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
             F  LQ      D   W  +I    QNG  ++A+  +  M + +   P+ +T+ +V+ A
Sbjct: 366 KGFDYLQ----EPDIVLWTSMIGGYVQNGENEDALSLYGRM-EMEGILPNELTMASVLKA 420

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +L    +GK +H   +K   GL+  + +AL TMY +C  +K  + VF      ++ +W
Sbjct: 421 CSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISW 480

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           N MIS  SQN     ALELF  ++ E   P+ ++ V+ILSAC+ +G++  G
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 18/489 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+  Y        +  +F     ++ V+W  MI+     +     L  F  M  E   
Sbjct: 147 SSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEG 206

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +      ++SALT    +  G+ +HC+++K G+++  S+ N  V MYAKCG L+ +  T
Sbjct: 207 ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQT 266

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      ++++W+ +++G   +   +K L  F  M  SG +    +    + A + LG  
Sbjct: 267 FETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAA 326

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H   +KLG+E   Y  V  +L+ MY++C  I  A + F  +   D+V W ++I 
Sbjct: 327 WEGKQVHDYLLKLGFESQIY--VMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIG 384

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  NG+ E+A  L   M+ M  + P+  T+ +++  C+    L +G+ +H   ++   G
Sbjct: 385 GYVQNGENEDALSLYGRME-MEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + ++L   Y+K   L    L+F  + P  D++SWN+MISG            LF+E
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRM-PARDVISWNAMISGLSQNGCGKEALELFEE 502

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCG 417
           M    ++  + T + IL +C+    +E G         + G          ++ +    G
Sbjct: 503 MQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAG 562

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVN 476
            L  A    +  + +     W I++ AC    +++  A    K M      S   V L +
Sbjct: 563 KLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSS 622

Query: 477 VISACGNLE 485
           + SA G  E
Sbjct: 623 IYSALGRWE 631



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 169/339 (49%), Gaps = 10/339 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ +    +L+T Y+     + +L  F  + +K+ +TW+AMIT   ++      L  F
Sbjct: 239 GLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GIR    T + +++A + +    +G+ VH   +K G  +   +    V+MYAKC
Sbjct: 299 SSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKC 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  +   D V W +++ G + N   E  L  +  M   G   + ++++S +
Sbjct: 359 SSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVL 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IHA  +K G+     V + ++L +MY++CG ++     F  M  +D
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGF--GLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWNA+I G + NG  +EA +L  EMQL    +PD  T V ++S C+   L+       
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQL-EGTKPDYVTFVNILSACSHMGLVE-----R 530

Query: 302 GYAIRRLLGYDLLMMNSLMDFYS-KSNSLSKAELLFNAI 339
           G+   R++ +D   M+  ++ Y+   + LS+A  L  AI
Sbjct: 531 GWGYFRMM-FDEFGMDPRVEHYACMVDILSRAGKLKEAI 568


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/599 (31%), Positives = 319/599 (53%), Gaps = 39/599 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+++SM  + G+   A + F  M  +DV SWN ++ G+   G  EEA DL H M L    
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRM-LWAGA 191

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD+ T   ++  C     L  GR VH + +R  LG ++ ++N+L+  Y+K   +  A  
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ ++ + D +SWN+MI+G            LF  ML    + +  T+ ++  +     
Sbjct: 252 VFDGMS-LTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L+F K IH   +K GF+ +    N+L+ MY + G +  A ++  R+    D   W  +I
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRME-TRDAMSWTAMI 369

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALK 499
               +NG   +A++ + ++ +  N SPD VT+ + ++AC   G L++   G  LH LA  
Sbjct: 370 SGYEKNGFPDKALEVY-ALMEVNNVSPDDVTVASALAACASLGRLDV---GIKLHELATS 425

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                   V NAL+ MY + + I+ A  VF+   + ++ +W+ MI+ F  N     AL  
Sbjct: 426 KGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYY 485

Query: 560 FRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           FRH+  + +PN ++ ++ L+AC   G LR GK+IH HV   G     ++ +ALLD+Y  C
Sbjct: 486 FRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKC 545

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K   +W+ M++ +  HG G  A+  F+EM  +G  P + + ++LL
Sbjct: 546 GQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL 605

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
             CS +G+V +G + +++M E+Y + P  +H+ C+VD+L R G+L E Y FI  +PI P 
Sbjct: 606 CGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPD 665

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             VWGA+L+ C  H + ++G+  A+++ +LEP + GY++ LS++Y   G W +  ++ K
Sbjct: 666 AAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRK 724



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 266/565 (47%), Gaps = 24/565 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    +   +   L  +  M+  G R D  T   ++ +   +  
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPD 210

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH   ++ G+  +  + N  V MYAKCGD+ ++   F GM   D +SWN +++G
Sbjct: 211 LTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAG 270

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N+  E  L  F  M     + + ++++S   AS  L +L + K IHAL +K G+   
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MYS  G +  A   F  M  +D +SW A+I G+  NG  ++A ++   M
Sbjct: 331 --VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALM 388

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           ++  +V PD  TV + ++ CA    L  G  +H  A  +     +++ N+L++ Y+KS  
Sbjct: 389 EV-NNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKI 447

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           + KA  +F  + P  D++SW+SMI+G             F+ ML      S  T +A L 
Sbjct: 448 IEKAIEVFKYM-PDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSV-TFIAALA 505

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DT 435
           +C +  SL  GK IH   L+ G ++     NAL+ +Y+ CG     ++  Q  +H + D 
Sbjct: 506 ACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ--TGYAWAQFGAHGTKDV 563

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-H 494
             WNI++     +GH   A+  F  M  +    PD VT V ++  C    +  +G  L H
Sbjct: 564 VSWNIMLAGFVAHGHGDIALSFFNEML-ETGEHPDEVTFVALLCGCSRAGMVSQGWELFH 622

Query: 495 GLALKSLMGLDTRVQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQNK-A 552
            +  K  +  + +    ++ +  R  R  +  + +       +   W  +++    ++  
Sbjct: 623 SMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNI 682

Query: 553 EVRALELFRHLEFEPNEISIVSILS 577
           E+  L     LE EPN+     +LS
Sbjct: 683 ELGELAAKIVLELEPNDAGYHVLLS 707



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 210/447 (46%), Gaps = 18/447 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+T Y+     E++  +F      D ++WNAMI    EN     GL  F  M+E+ +  
Sbjct: 235 ALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEP 294

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T+  +  A   ++ L   + +H L++K G   D + CN  + MY+  G +  +   F
Sbjct: 295 NLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVF 354

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           S M   D +SW  ++SG   N +P+K L  +  M  +    D+V+++SA+AA A LG L 
Sbjct: 355 SRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLD 414

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H L    G+    Y+ V N+L+ MY++   IE A   F  M  KDV+SW+++I G
Sbjct: 415 VGIKLHELATSKGF--IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAG 472

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           F  N K  EA  L +   ++  V+P+  T +  ++ CA +  LR G+ +H + +R+ +  
Sbjct: 473 FCFNHKNFEA--LYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIAS 530

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +  + N+L+D Y K      A   F A     D+VSWN M++G             F EM
Sbjct: 531 EGYVPNALLDLYVKCGQTGYAWAQFGAHG-TKDVVSWNIMLAGFVAHGHGDIALSFFNEM 589

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGD 418
           L         T +A+L  C+    +  G  + H    K     N      ++ +    G 
Sbjct: 590 LETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGR 649

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVAC 445
           L   ++ + R+    D + W  ++  C
Sbjct: 650 LTEGYNFINRMPITPDAAVWGALLNGC 676



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 162/631 (25%), Positives = 285/631 (45%), Gaps = 52/631 (8%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G+   +   F+ M   D  SWN ++ G     + E+ L  +  M W+G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
            + D  +    + +   + +L+ G+ +HA  L   LG E    V V N+L++MY++CGD+
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVE----VDVLNALVTMYAKCGDV 246

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           EAA + F GM+  D +SWNA+I G   N + E   +L   M L   VEP++ T+ ++   
Sbjct: 247 EAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHM-LEDEVEPNLMTITSVT-- 303

Query: 288 CADSLL--LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
            A  LL  L   + +H  A++R    D+   NSL+  YS    + +A  +F+ +    D 
Sbjct: 304 VASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRME-TRDA 362

Query: 346 VSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCW 393
           +SW +MISG  K        E+  L    + S    T+ + L +C S   L+ G  +H  
Sbjct: 363 MSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHEL 422

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
               GF    +  NAL+ MY     +  A  + + +  + D   W+ +I     N    E
Sbjct: 423 ATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMP-DKDVISWSSMIAGFCFNHKNFE 481

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A+  F+ M    +  P+SVT +  ++AC        GK +H   L+  +  +  V NAL+
Sbjct: 482 ALYYFRHML--ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALL 539

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            +Y +C     A   F +    ++ +WN M++ F  +     AL  F  +      P+E+
Sbjct: 540 DLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEV 599

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAY 630
           + V++L  C++ G++  G ++    FH   ++ S +         N K  A    ++S  
Sbjct: 600 TFVALLCGCSRAGMVSQGWEL----FHSMTEKYSIV--------PNLKHYACMVDLLSRV 647

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP- 689
           G   +G+  I          I P  +   +LL+ C     ++ G      +LE   + P 
Sbjct: 648 GRLTEGYNFIN------RMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLE---LEPN 698

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +  +HV + D+   +G   E  +  K + ++
Sbjct: 699 DAGYHVLLSDLYADAGMWAEVSKVRKTMRVK 729



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 5/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  YS++     +  +F     +D ++W AMI+   +N      L  
Sbjct: 325 RGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEV 384

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G I    + N  V MYAK
Sbjct: 385 YALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAK 444

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              +  +   F  M   D +SW+++++G   N+   + L YFR M  +  + ++V+  +A
Sbjct: 445 SKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAA 503

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A  G L  GK IHA  ++ G     YV   N+L+ +Y +CG    A   F     K
Sbjct: 504 LAACAATGSLRCGKEIHAHVLRQGIASEGYVP--NALLDLYVKCGQTGYAWAQFGAHGTK 561

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN ++ GF  +G  + A    +EM L     PD  T V L+  C+ + ++ +G  +
Sbjct: 562 DVVSWNIMLAGFVAHGHGDIALSFFNEM-LETGEHPDEVTFVALLCGCSRAGMVSQGWEL 620

Query: 301 -HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            H    +  +  +L     ++D  S+   L++     N +    D   W ++++G
Sbjct: 621 FHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG 675



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 25/244 (10%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +G  Q+A+   +S  +     PD    V +   C     A  G    G A  +      R
Sbjct: 75  HGELQQALWLLESSPE----PPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLR 130

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
           + NA+++M  R  +   A  VF      ++ +WN M+  + +      AL+L+  + +  
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 566 -EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA-- 622
             P+  +   +L +C  +  L  G+++H HV   G      + +AL+ MY+ C    A  
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 623 -------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                        W++MI+ +  + +    +ELF  M    + P   ++ S+  A   SG
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA---SG 307

Query: 670 LVDE 673
           L+ +
Sbjct: 308 LLSD 311


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/744 (27%), Positives = 359/744 (48%), Gaps = 88/744 (11%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CL 150
           G+VVH    +  + +D+ L N F+ +Y+KC  + S+   F  +   +  SWN I++  C 
Sbjct: 25  GKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCK 84

Query: 151 HNNYPEKCLLYFR-----------------EMGWSGEQAD-------------NVSLSSA 180
             N    C L+ +                   G+  +  D             +++ ++ 
Sbjct: 85  ARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATV 144

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A   L +   G+  H + IK+G E + YV   N+L+ MY++CG    A R F  +   
Sbjct: 145 FSACGSLLDADCGRRTHGVVIKVGLESNIYV--VNALLCMYAKCGLNADALRVFRDIPEP 202

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS--------- 291
           + V++  ++ G A   + +EA +L   M L + +  D  ++ +++ +CA           
Sbjct: 203 NEVTFTTMMGGLAQTNQIKEAAELFRLM-LRKGIRVDSVSLSSMLGVCAKGERDVGPCHG 261

Query: 292 -LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
                +G+ +H  +++     DL + NSL+D Y+K   +  AE +F  +   + +VSWN 
Sbjct: 262 ISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLN-RHSVVSWNI 320

Query: 351 MISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           MI+G                       CNS ++ E+ + +       G+  + +    ++
Sbjct: 321 MIAGYGNR-------------------CNSEKAAEYLQRMQ----SDGYEPDDVTYINML 357

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
              +  GD+     +   +   S TS WN ++    QN   +EA++ F+ M Q Q   PD
Sbjct: 358 TACVKSGDVRTGRQIFDCMPCPSLTS-WNAILSGYNQNADHREAVELFRKM-QFQCQHPD 415

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             TL  ++S+C  L     GK +H  + K     D  V ++LI +Y +C  ++ +  VF 
Sbjct: 416 RTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFS 475

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRH 587
                ++  WN M++ FS N     AL  F   R L F P+E S  +++S+C +L  L  
Sbjct: 476 KLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQ 535

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G+Q H  +   GF ++ F+ S+L++MY  C               ++   W+ MI  Y  
Sbjct: 536 GQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQ 595

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G  A+ L+++M +SG +P   + +++L+ACSHS LVDEGL+ +N ML++Y V P+  
Sbjct: 596 NGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVA 655

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ CI+D L R+G+  E    +  +P +    VW  +LS+C  H +  + K+ AE L++L
Sbjct: 656 HYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRL 715

Query: 753 EPENVGYYISLSNMYVALGRWKDA 776
           +P+N   Y+ L+NMY +LG+W DA
Sbjct: 716 DPQNSASYVLLANMYSSLGKWDDA 739



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 189/746 (25%), Positives = 325/746 (43%), Gaps = 99/746 (13%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L AY      + +  LF +   ++ V+ N +I+  V        L  +  ++ +G+  
Sbjct: 77  AILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIP 136

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T   + SA   +     GR  H + IK G+ ++  + N  + MYAKCG    +   F
Sbjct: 137 SHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVF 196

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA------ 185
             +   + V++ T+M G    N  ++    FR M   G + D+VSLSS +   A      
Sbjct: 197 RDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDV 256

Query: 186 --CLG--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             C G    + GK +H L +KLG+E    + + NSL+ MY++ GD+++AE+ F  +    
Sbjct: 257 GPCHGISTNAQGKQMHTLSVKLGFERD--LHLCNSLLDMYAKIGDMDSAEKVFVNLNRHS 314

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G+      E+A + L  MQ     EPD  T + +++ C  S  +R GR + 
Sbjct: 315 VVSWNIMIAGYGNRCNSEKAAEYLQRMQ-SDGYEPDDVTYINMLTACVKSGDVRTGRQI- 372

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                    +D +                          P   L SWN+++SG       
Sbjct: 373 ---------FDCM--------------------------PCPSLTSWNAILSGYNQNADH 397

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF++M + C     +TL  IL SC     LE GK +H    K GF ++    ++L
Sbjct: 398 REAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSL 457

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +++Y  CG +  +  +  ++    D  CWN ++   + N   Q+A+  FK M +Q    P
Sbjct: 458 INVYSKCGKMELSKHVFSKLPE-LDVVCWNSMLAGFSINSLGQDALSFFKKM-RQLGFFP 515

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              +   V+S+C  L   F+G+  H   +K     D  V ++LI MY +C D+  A   F
Sbjct: 516 SEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFF 575

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           +     N  TWN MI  ++QN     AL L+  +     +P++I+ V++L+AC+   ++ 
Sbjct: 576 DVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVD 635

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G +I                +A+L  Y      A ++ +I      G+  E   +   M
Sbjct: 636 EGLEIF---------------NAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAM 680

Query: 647 CNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEE-YDVRPE-TEHHVCIVDML 701
                 P K   +    +LS+C     +   L       EE Y + P+ +  +V + +M 
Sbjct: 681 ------PCKDDAVVWEVVLSSCR----IHANLSLAKRAAEELYRLDPQNSASYVLLANMY 730

Query: 702 GRSGKLQEAY---EFIKNLPIQPKPG 724
              GK  +A+   + + +  ++  PG
Sbjct: 731 SSLGKWDDAHVVRDLMSHNQVRKDPG 756



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/640 (24%), Positives = 275/640 (42%), Gaps = 100/640 (15%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++    +LL  Y+       +L +F +    + VT+  M+    +   +      F
Sbjct: 168 GLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELF 227

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ----------MNCLKQGRVVHCLSIKAGMIADSSLC 111
             M+ +GIR DS +L  ++    +          ++   QG+ +H LS+K G   D  LC
Sbjct: 228 RLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLC 287

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  ++MYAK GD++S+E  F  ++    VSWN +++G  +    EK   Y + M   G +
Sbjct: 288 NSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYE 347

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D+V+                                 Y+++  + +    + GD+    
Sbjct: 348 PDDVT---------------------------------YINMLTACV----KSGDVRTGR 370

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           + F  M C  + SWNAI+ G+  N    EA +L  +MQ  +   PD  T+  ++S CA+ 
Sbjct: 371 QIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQF-QCQHPDRTTLAVILSSCAEL 429

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L  G+ VH  + +     D+ + +SL++ YSK   +  ++ +F+ + P  D+V WNSM
Sbjct: 430 GFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKL-PELDVVCWNSM 488

Query: 352 ISG------------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           ++G             FK+M    +  S+FSF+T   ++ SC    SL  G+  H   +K
Sbjct: 489 LAGFSINSLGQDALSFFKKMRQLGFFPSEFSFAT---VVSSCAKLSSLFQGQQFHAQIVK 545

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF ++    ++L+ MY  CGD+  A      +    +T  WN +I    QNG    A+ 
Sbjct: 546 DGFLDDIFVGSSLIEMYCKCGDVNGARCFFD-VMPGRNTVTWNEMIHGYAQNGDGHNALC 604

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            +  M       PD +T V V++AC +  L  EG                 + NA++  Y
Sbjct: 605 LYNDMI-SSGEKPDDITYVAVLTACSHSALVDEG---------------LEIFNAMLQKY 648

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSIL 576
           G    +   +           C  +C+  A   N+ EV    +   +  + + +    +L
Sbjct: 649 GVVPKVAHYT-----------CIIDCLSRAGRFNEVEV----ILDAMPCKDDAVVWEVVL 693

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           S+C     L   K+    ++ L  Q NS     L +MYS+
Sbjct: 694 SSCRIHANLSLAKRAAEELYRLDPQ-NSASYVLLANMYSS 732



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 112/510 (21%), Positives = 225/510 (44%), Gaps = 81/510 (15%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +  L+  C  +     G+ VH    R  L  D  + N  ++ YSK + ++ A  +F+ I 
Sbjct: 9   LANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNI- 67

Query: 341 PMNDLVSWNSMISGLFK--EMLYLCSQF---------SFSTLLA---------------- 373
           P  ++ SWN++++   K   + Y C  F         S +TL++                
Sbjct: 68  PHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYD 127

Query: 374 ------ILPS----------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                 ++PS          C S    + G+  H   +K+G  +N   VNAL+ MY  CG
Sbjct: 128 SVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCG 187

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               A  + + I   ++ + +  ++    Q    +EA + F+ M  ++    DSV+L ++
Sbjct: 188 LNADALRVFRDIPEPNEVT-FTTMMGGLAQTNQIKEAAELFRLML-RKGIRVDSVSLSSM 245

Query: 478 ISACGNLELAF----------EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           +  C   E             +GK +H L++K     D  + N+L+ MY +  D+ SA  
Sbjct: 246 LGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEK 305

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           VF +    ++ +WN MI+ +       +A E  + ++   +EP++++ +++L+AC + G 
Sbjct: 306 VFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGD 365

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           +R G+QI   +                     C S  +W++++S Y  +    EA+ELF 
Sbjct: 366 VRTGRQIFDCM--------------------PCPSLTSWNAILSGYNQNADHREAVELFR 405

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           +M      P ++++  +LS+C+  G ++ G + +    +++    +      ++++  + 
Sbjct: 406 KMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAAS-QKFGFYDDVYVASSLINVYSKC 464

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           GK++ +      LP +     W +ML+  S
Sbjct: 465 GKMELSKHVFSKLP-ELDVVCWNSMLAGFS 493



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 69/353 (19%)

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           S+ L N++  C   +    GK +H    +  +  DT + N  I +Y +C  I SA  VF+
Sbjct: 6   SLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFD 65

Query: 531 SCYNCNLCTWNCMISAFSQNKA-------------------------------EVRALEL 559
           +  + N+ +WN +++A+ + +                                E +AL+ 
Sbjct: 66  NIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDT 125

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +  +  +   P+ I+  ++ SAC  L     G++ HG V  +G + N ++ +ALL MY+ 
Sbjct: 126 YDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAK 185

Query: 617 CKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C  NA                +++M+       +  EA ELF  M   GIR    S+ S+
Sbjct: 186 CGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSM 245

Query: 662 LSACSHSGLVDEG------LQYYNNMLEEYDVRP--ETEHHVC--IVDMLGRSGKLQEAY 711
           L  C+  G  D G             +    V+   E + H+C  ++DM  + G +  A 
Sbjct: 246 LGVCA-KGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAE 304

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-----EPENVGY 759
           +   NL        W  M++    +G+    ++ AE L ++     EP++V Y
Sbjct: 305 KVFVNLNRHSVVS-WNIMIAG---YGNRCNSEKAAEYLQRMQSDGYEPDDVTY 353


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/535 (35%), Positives = 284/535 (53%), Gaps = 44/535 (8%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAEL 334
           D   +  +I   A +  LR G+ +H   I    GY     + N L++ YSK   L  A  
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLI--CAGYTPCTFLTNHLVNMYSKCGELDHALK 61

Query: 335 LFNAIAPMNDLVSWNSMISGL-----FKEM------LYLC----SQFSFSTLLAILPSCN 379
           LF+ + P  +LVSW +MISGL     F E       + +C    +QF+FS+ +    +C 
Sbjct: 62  LFDTM-PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR---ACA 117

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  S+E GK +HC  LK G  +     + L  MY  CG +  A  + + +    + S W 
Sbjct: 118 SLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WT 176

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I   ++ G F+EA+  FK M  ++  + D   L + + ACG L+    G+S+H   +K
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEE-VTIDQHVLCSTLGACGALKACKFGRSVHSSVVK 235

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALE 558
                D  V NAL  MY +  D++SAS VF     C N+ ++ C+I  + + +   + L 
Sbjct: 236 LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLS 295

Query: 559 LF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +F   R    EPNE +  S++ AC     L  G Q+H  V  + F E+ F+SS L+DMY 
Sbjct: 296 VFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYG 355

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C                +  AW+S++S +G HG G +AI++F  M + G++P   + IS
Sbjct: 356 KCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFIS 415

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LL+ CSH+GLV+EGL Y+ +M + Y V P  EH+ C++D+LGR+G+L+EA EFI  +P +
Sbjct: 416 LLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFE 475

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           P    W + L AC  HGD +MGK  AE L KLEP+N G  + LSN+Y    +W+D
Sbjct: 476 PNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 530



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 241/533 (45%), Gaps = 53/533 (9%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  L  ++    +   L++G+ +H L I AG    + L N  VNMY+KCG+L+ +   F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW  ++SG   N+   + +  F  M   GE     + SSA+ A A LG + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +H L +K G     +V   ++L  MYS+CG +  A + F  M CKD VSW A+IDG
Sbjct: 124 MGKQMHCLALKFGIGSELFVG--SNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           ++  G+FEEA     +M +   V  D   + + +  C      + GRSVH   ++     
Sbjct: 182 YSKIGEFEEALLAFKKM-IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+ + N+L D YSK+  +  A  +F   +   ++VS+  +I G            +F E+
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 360 LYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  ++F+FS+L+    +C +  +LE G  +H   +K+ F  +    + L+ MY  C
Sbjct: 301 RRQGIEPNEFTFSSLIK---ACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A      I   ++ + WN ++    Q+G  ++AIK F+ M   +   P+++T ++
Sbjct: 358 GLLEQAIQAFDEIGDPTEIA-WNSLVSVFGQHGLGKDAIKIFERMV-DRGVKPNAITFIS 415

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +++ C +  L  EG       L     +D          YG     +             
Sbjct: 416 LLTGCSHAGLVEEG-------LDYFYSMD--------KTYGVVPGEEH------------ 448

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
              ++C+I    +      A E    + FEPN     S L AC   G    GK
Sbjct: 449 ---YSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGK 498



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 203/451 (45%), Gaps = 18/451 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS     + +L LF     +++V+W AMI+   +N      +  F  M   G    
Sbjct: 46  LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                  + A   +  ++ G+ +HCL++K G+ ++  + +   +MY+KCG +  +   F 
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M C D VSW  ++ G       E+ LL F++M       D   L S + A   L    +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW-GMTCKDVVSWNAIIDG 251
           G+ +H+  +KLG+E   +V   N+L  MYS+ GD+E+A   F     C++VVS+  +IDG
Sbjct: 226 GRSVHSSVVKLGFESDIFVG--NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 283

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +    + E+   +  E++  + +EP+  T  +LI  CA+   L +G  +H   ++     
Sbjct: 284 YVETEQIEKGLSVFVELR-RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEM 359
           D  + + L+D Y K   L +A   F+ I    + ++WNS++S             +F+ M
Sbjct: 343 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERM 401

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +    + +  T +++L  C+    +E G    +      G        + ++ +    G 
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           L  A   + R+    +   W   + AC  +G
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 7/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++L   YS       +  +F E   KD V+W AMI    +       L  F
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++E +  D   L   + A   +   K GR VH   +K G  +D  + N   +MY+K 
Sbjct: 196 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 255

Query: 122 GDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           GD+ S+   F     C + VS+  ++ G +     EK L  F E+   G + +  + SS 
Sbjct: 256 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A    L  G  +HA  +K+ +++ P+VS  + L+ MY +CG +E A +AF  +   
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIGDP 373

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             ++WN+++  F  +G  ++A  +   M + R V+P+  T ++L++ C+ + L+ EG   
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKIFERM-VDRGVKPNAITFISLLTGCSHAGLVEEGLD- 431

Query: 301 HGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           + Y++ +  G        + ++D   ++  L +A+   N +    +   W S +
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 320/616 (51%), Gaps = 49/616 (7%)

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           + G++LG          N+++SM  + G+I  A R F  M  +DV SWN ++ G+   G 
Sbjct: 128 SFGLRLG----------NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGF 177

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA DL + M L   + PD+ T   ++  C      R GR VH + +R   G ++ ++N
Sbjct: 178 LEEALDLYYRM-LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN 236

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           +L+  Y+K   +  A  +F+ +A + D +SWN+MI+G            LF  ML    Q
Sbjct: 237 ALVTMYAKCGDIVAARKVFDGMA-VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T+ ++  +      + F K +H + +K GF+ +    N+L+ MY + G +  A  +
Sbjct: 296 PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKI 355

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---G 482
             R+    D   W  +I    +NG   +A++ + ++ +  N SPD VT+ + ++AC   G
Sbjct: 356 FSRME-TKDAMSWTAMISGYEKNGFPDKALEVY-ALMELHNVSPDDVTIASALAACACLG 413

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L++   G  LH LA          V NAL+ MY + + I  A  VF+     ++ +W+ 
Sbjct: 414 RLDV---GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 470

Query: 543 MISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           MI+ F  N     AL  FR++    +PN ++ ++ LSAC   G LR GK+IH +V   G 
Sbjct: 471 MIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI 530

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
               ++ +ALLD+Y  C               K   +W+ M+S +  HG G  A+ LF++
Sbjct: 531 GSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQ 590

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G  P + + ++LL ACS +G+V +G + ++ M E++ + P  +H+ C+VD+L R G
Sbjct: 591 MVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVG 650

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           KL EAY  I  +PI+P   VWGA+L+ C  H   ++G+  A+++ +LEP +V Y++ L +
Sbjct: 651 KLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCD 710

Query: 766 MYVALGRWKDAVEIGK 781
           +Y   G+W     + K
Sbjct: 711 LYTDAGKWAQVARVRK 726



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 261/558 (46%), Gaps = 22/558 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    +   +   L  +  M+  G+R D  T   ++     +  
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR VH   ++ G   +  + N  V MYAKCGD+ ++   F GM   D +SWN +++G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N+  E  L  F  M  +  Q + ++++S   AS  L E+ + K +H   +K G+   
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MY+  G +  A + F  M  KD +SW A+I G+  NG  ++A ++   M
Sbjct: 333 --VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +L  +V PD  T+ + ++ CA    L  G  +H  A  +     +++ N+L++ Y+KS  
Sbjct: 391 EL-HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           + KA  +F  +A   D+VSW+SMI+G             F+ ML      S  T +A L 
Sbjct: 450 IDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSV-TFIAALS 507

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +L  GK IH + L+ G  +     NAL+ +Y+ CG    A++    +    D  
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS-VHSEKDVV 566

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-HG 495
            WNI++     +G    A+  F  M  +    PD VT V ++ AC    +  +G  L H 
Sbjct: 567 SWNIMLSGFVAHGLGDIALSLFNQMV-EMGEHPDEVTFVALLCACSRAGMVIQGWELFHM 625

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AE 553
           +  K  +  + +    ++ +  R   +  A  +        +   W  +++    ++  E
Sbjct: 626 MTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVE 685

Query: 554 VRALELFRHLEFEPNEIS 571
           +  L     LE EPN+++
Sbjct: 686 LGELAAKVILELEPNDVA 703



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 286/626 (45%), Gaps = 48/626 (7%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G++  +   F+ M   D  SWN ++ G     + E+ L  +  M W+G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +    +     + +   G+ +HA  ++ G+ D   V V N+L++MY++CGDI A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDE--VDVLNALVTMYAKCGDIVA 250

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A + F GM   D +SWNA+I G   N + E   +L   M L   V+P++ T+ ++    A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVT--VA 307

Query: 290 DSLLLREG--RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
             +L   G  + +HG+A++R    D+   NSL+  Y+    +  A  +F+ +    D +S
Sbjct: 308 SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMS 366

Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
           W +MISG  K        E+  L    + S    T+ + L +C     L+ G  +H    
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             GF    +  NAL+ MY     +  A  + + ++   D   W+ +I     N    EA+
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFEAL 485

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F+ M    +  P+SVT +  +SAC        GK +H   L+  +G +  V NAL+ +
Sbjct: 486 YYFRYML--GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISI 572
           Y +C     A   F      ++ +WN M+S F  +     AL LF     +   P+E++ 
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF 603

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           V++L AC++ G++  G ++    FH+  ++ S +         N K  A    ++S    
Sbjct: 604 VALLCACSRAGMVIQGWEL----FHMMTEKFSIV--------PNLKHYACMVDLLSRV-- 649

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ET 691
            GK  EA  L + M    I+P  +   +LL+ C     V+ G      +LE   + P + 
Sbjct: 650 -GKLTEAYNLINRM---PIKPDAAVWGALLNGCRIHRHVELGELAAKVILE---LEPNDV 702

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +HV + D+   +GK  +     K +
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTM 728



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 221/469 (47%), Gaps = 28/469 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T Y+      ++  +F      D ++WNAMI    EN     GL  F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELF 286

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  ++ +  T+  +  A   ++ +   + +H  ++K G   D + CN  + MY   
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS M   D +SW  ++SG   N +P+K L  +  M       D+V+++SA+
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA ACLG L  G  +H L    G+    YV V N+L+ MY++   I+ A   F  M  KD
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIR--YVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 464

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+++I GF  N +  EA  L +   ++  V+P+  T +  +S CA +  LR G+ +H
Sbjct: 465 VVSWSSMIAGFCFNHRSFEA--LYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIH 522

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y +R  +G +  + N+L+D Y K    S A   F ++    D+VSWN M+SG       
Sbjct: 523 AYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL------KLGFSNNT 403
                LF +M+ +       T +A+L +C+       G  I  W+L      K     N 
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRA-----GMVIQGWELFHMMTEKFSIVPNL 636

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
                ++ +    G L  A++L+ R+    D + W  ++  C  + H +
Sbjct: 637 KHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVE 685



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 167/360 (46%), Gaps = 15/360 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  Y+++     +  +F     KD ++W AMI+   +N      L  
Sbjct: 327 RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV 386

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G I    + N  + MYAK
Sbjct: 387 YALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 446

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   F  M   D VSW+++++G   N+   + L YFR M     + ++V+  +A
Sbjct: 447 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAA 505

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A  G L  GK IHA  ++ G     YV   N+L+ +Y +CG    A   F   + K
Sbjct: 506 LSACAATGALRSGKEIHAYVLRCGIGSEGYVP--NALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN ++ GF  +G  + A  L ++M  M    PD  T V L+  C+     R G  +
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACS-----RAGMVI 617

Query: 301 HGYAIRRLLGYDLLMMNSL------MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G+ +  ++     ++ +L      +D  S+   L++A  L N +    D   W ++++G
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/601 (31%), Positives = 329/601 (54%), Gaps = 42/601 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++IS Y   G +  A   F G +CK  ++W++II G+   G   EAFDL   M+L    
Sbjct: 100 NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRL-EGW 158

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +    T+ +++ +C+   L++ G  +HG+ ++     ++ ++  L+D Y+K   +S+AE 
Sbjct: 159 KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEF 218

Query: 335 LFNAIA-PMNDLVSWNSMISGL------FKEMLYL---------CSQFSFSTLLAILPSC 378
           LF  +     + V W +M++G       +K + +          C+Q++F T   IL +C
Sbjct: 219 LFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT---ILTAC 275

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +S  +  FG+ +H + +K GF +N    +AL+ MY  CGDL  A ++L+ +  + D   W
Sbjct: 276 SSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETM-EDDDVVSW 334

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N ++V   ++G  +EA++ FK+M   +N   D  T  +V++ C  +  +   KS+HGL +
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNM-HGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLII 391

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K+       V NAL+ MY +  D+  A TVFE     ++ +W  +++ ++QN +   +L+
Sbjct: 392 KTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLK 451

Query: 559 LF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +F   R     P++  + SILSAC +L +L  GKQ+H      G + +  + ++L+ MY+
Sbjct: 452 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYA 511

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K    W+++I  Y  +GKG  +++ +  M +SG RP   + I 
Sbjct: 512 KCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIG 571

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LL ACSH+GLVDEG +Y+  M + Y ++P  EH+ C++D+ GRSGKL EA + +  + ++
Sbjct: 572 LLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK 631

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIG 780
           P   VW ++LSAC  H + ++ ++ A  LF+LEP N   Y+ LSNMY A  +W D  +I 
Sbjct: 632 PDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIR 691

Query: 781 K 781
           K
Sbjct: 692 K 692



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 276/606 (45%), Gaps = 82/606 (13%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS----------------GC------ 149
           N  +N  +K G +N +   F  M   D  SWNT++S                GC      
Sbjct: 69  NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 128

Query: 150 ----LHNNYPE-----KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
               + + Y +     +    FR M   G +A   +L S +   + LG +  G++IH   
Sbjct: 129 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 188

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKF 258
           +K G+E +  V V   L+ MY++C  +  AE  F G+    K+ V W A++ G+A NG  
Sbjct: 189 VKNGFEGN--VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDG 246

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            +A +    M   + VE +  T  T+++ C+  L    G  VHG+ ++   G ++ + ++
Sbjct: 247 YKAVEFFRYMH-AQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSA 305

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+D Y+K   L  A+ +   +   +D+VSWNS++ G            LFK M     + 
Sbjct: 306 LVDMYAKCGDLKNAKNMLETMED-DDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI 364

Query: 367 SFSTLLAILPSCN----SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
              T  ++L  C     +P      KS+H   +K GF N  +  NAL+ MY   GD+  A
Sbjct: 365 DDYTFPSVLNCCVVGSINP------KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           +++ +++    D   W  ++    QN   +E++K F  M +    +PD   + +++SAC 
Sbjct: 419 YTVFEKMLEK-DVISWTSLVTGYAQNNSHEESLKIFCDM-RVTGVNPDQFIVASILSACA 476

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L L   GK +H   +KS +     V N+L+ MY +C  +  A  +F S    ++ TW  
Sbjct: 477 ELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTA 536

Query: 543 MISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +I  ++QN     +L+ +  +      P+ I+ + +L AC+  G++  G++         
Sbjct: 537 IIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKY-------- 588

Query: 600 FQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           FQ+       +  +Y        ++ MI  +G  GK  EA +L  +M    ++P  +   
Sbjct: 589 FQQ-------MNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQM---DVKPDATVWK 638

Query: 660 SLLSAC 665
           SLLSAC
Sbjct: 639 SLLSAC 644



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 236/496 (47%), Gaps = 24/496 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF  ++   T L+  Y+       +  LF   E   K+ V W AM+T   +N      + 
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVE 251

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FF  M  +G+  +  T   I++A + +     G  VH   +K+G  ++  + +  V+MYA
Sbjct: 252 FFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYA 311

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGDL +++     M   D VSWN++M G + +   E+ L  F+ M     + D+ +  S
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS 371

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +  + C+      K +H L IK G+E+  Y  V+N+L+ MY++ GD++ A   F  M  
Sbjct: 372 VL--NCCVVGSINPKSVHGLIIKTGFEN--YKLVSNALVDMYAKTGDMDCAYTVFEKMLE 427

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SW +++ G+A N   EE+  +  +M++   V PD   V +++S CA+  LL  G+ 
Sbjct: 428 KDVISWTSLVTGYAQNNSHEESLKIFCDMRVT-GVNPDQFIVASILSACAELTLLEFGKQ 486

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VH   I+  L +   + NSL+  Y+K   L  A+ +F ++  + D+++W ++I G     
Sbjct: 487 VHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ-VKDVITWTAIIVGYAQNG 545

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGV 406
                   +  M+   ++  F T + +L +C+    ++ G+       K+ G        
Sbjct: 546 KGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHY 605

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQ 464
             ++ ++   G L  A  LL ++    D + W  ++ AC   +N    E   T     + 
Sbjct: 606 ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEP 665

Query: 465 QNASPDSVTLVNVISA 480
            NA P  V L N+ SA
Sbjct: 666 MNAMP-YVMLSNMYSA 680



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 151/613 (24%), Positives = 268/613 (43%), Gaps = 70/613 (11%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA------CVENR----------- 52
           +  LL   S       +  LF +   KD  +WN MI++       VE R           
Sbjct: 68  TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127

Query: 53  --------------CVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
                         C V     F  M  EG +    TL  ++   + +  ++ G ++H  
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC--ADTVSWNTIMSGCLHNNYPE 156
            +K G   +  +    V+MYAKC  ++ +E  F G+     + V W  +++G   N    
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           K + +FR M   G + +  +  + + A + +    +G+ +H   +K G+  + YV   ++
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ--SA 305

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+ MY++CGD++ A+     M   DVVSWN+++ GF  +G  EEA  L   M   R+++ 
Sbjct: 306 LVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH-GRNMKI 364

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  T  ++++ C    +    +SVHG  I+       L+ N+L+D Y+K+  +  A  +F
Sbjct: 365 DDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             +    D++SW S+++G            +F +M           + +IL +C     L
Sbjct: 423 EKMLE-KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLL 481

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIV 441
           EFGK +H   +K G   +    N+L+ MY  CG   D  A F  +Q      D   W  +
Sbjct: 482 EFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV----KDVITWTAI 537

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           IV   QNG  + ++K + +M       PD +T + ++ AC +  L  EG+  +   +  +
Sbjct: 538 IVGYAQNGKGRNSLKFYDAMV-SSGTRPDFITFIGLLFACSHAGLVDEGRK-YFQQMNKV 595

Query: 502 MGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEV 554
            G+    ++   +I ++GR   +  A  + +      +   W  ++SA   ++    AE 
Sbjct: 596 YGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAER 655

Query: 555 RALELFRHLEFEP 567
            A  LF   E EP
Sbjct: 656 AATNLF---ELEP 665


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/600 (32%), Positives = 310/600 (51%), Gaps = 40/600 (6%)

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           ++ V  +LI  Y + G    A + F  +   DVVSWN +I G++ +G   +A  L   M 
Sbjct: 77  FLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHM- 135

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           L  S  P+  T+ +L+  C    L  +GRSVH + I+  LG D  + N+L   Y+K + L
Sbjct: 136 LRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDL 195

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPS 377
             ++LLF  +   N ++SWN+MI               FKEML    Q S  T++ ++ +
Sbjct: 196 EASQLLFQEMGEKN-VISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSA 254

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
              PE+      +HC+ +K GF+ +   V +L+ +Y   G    A  LL       D   
Sbjct: 255 NAVPET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMA-KLLYECYPTKDLIS 307

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
              +I + ++ G  + A++ F   T + +  PD+V L++V+    +      G + HG  
Sbjct: 308 LTGIISSYSEKGEVESAVECFIQ-TLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYG 366

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           LK+ +  D  V N LI+ Y R  +I +A ++F       L TWN MIS   Q      A+
Sbjct: 367 LKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAM 426

Query: 558 ELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           ELF  +     +P+ I+I S+LS C QLG LR G+ +HG++     +   F  +AL+DMY
Sbjct: 427 ELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMY 486

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C                    W+S+IS Y  +G   +A   F ++   G+ P K + +
Sbjct: 487 TKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFL 546

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +L+AC+H GLV  G++Y+  M +EY + P  +H+ CIV +LGR+G  +EA E I N+ I
Sbjct: 547 GVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEI 606

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   VWGA+LSAC    + K+G+ +A+ LF L  +N G+Y+SLSN+Y  +GRW D   +
Sbjct: 607 RPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDVARV 666



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/623 (25%), Positives = 280/623 (44%), Gaps = 60/623 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L  +T+L+  Y  + +   +  LF +  + DVV+WN +I    ++      L  
Sbjct: 72  RGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQL 131

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ E  R + TT+  ++ +  +     QGR VH   IKAG+  D  L N   +MYAK
Sbjct: 132 FVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAK 191

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C DL +S+  F  M   + +SWNT++     N + +K +L F+EM   G Q   V++ + 
Sbjct: 192 CDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNL 251

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A+A        + +H   IK G+      SV  SL+ +Y++ G  + A+  +     K
Sbjct: 252 MSANAV------PETVHCYIIKCGFTGD--ASVVTSLVCLYAKQGFTDMAKLLYECYPTK 303

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++S   II  ++  G+ E A +   +  L   ++PD   +++++   +D      G + 
Sbjct: 304 DLISLTGIISSYSEKGEVESAVECFIQ-TLKLDIKPDAVALISVLHGISDPSHFAIGCAF 362

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HGY ++  L  D L+ N L+ FYS+ + +  A  LF   +    L++WNSMISG      
Sbjct: 363 HGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSE-KPLITWNSMISGCVQAGK 421

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M     +    T+ ++L  C     L  G+++H + L+           A
Sbjct: 422 SSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTA 481

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSC---WNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L+ MY  CG L  A    ++I ++ +  C   WN +I   +  G   +A   F  + Q+Q
Sbjct: 482 LIDMYTKCGRLDYA----EKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKL-QEQ 536

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD +T + V++AC +  L + G     +  K   GL   +Q+               
Sbjct: 537 GLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKE-YGLMPTLQH--------------- 580

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
                         + C++    +      A+E+  ++E  P+     ++LSAC     +
Sbjct: 581 --------------YACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEV 626

Query: 586 RHGKQIHGHVFHLGFQENSFISS 608
           + G+ +  ++F L ++   F  S
Sbjct: 627 KLGECLAKNLFLLNYKNGGFYVS 649


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/535 (35%), Positives = 283/535 (52%), Gaps = 44/535 (8%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAEL 334
           D   +  +I   A +  LR G+ +H   I    GY     + N L++ YSK   L  A  
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLI--CAGYTPCTFLTNHLVNMYSKCGELDHALK 61

Query: 335 LFNAIAPMNDLVSWNSMISGL-----FKEM------LYLC----SQFSFSTLLAILPSCN 379
           LF+ + P  +LVSW +MISGL     F E       + +C    +QF+FS+ +    +C 
Sbjct: 62  LFDTM-PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR---ACA 117

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  S+E GK +HC  LK G  +     + L  MY  CG +  A  + + +    + S W 
Sbjct: 118 SLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WT 176

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I   ++ G F+EA+  FK M  ++  + D   L + + ACG L+    G+S+H   +K
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEE-VTIDQHVLCSTLGACGALKACKFGRSVHSSVVK 235

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALE 558
                D  V NAL  MY +  D++SAS VF     C N+ ++ C+I  + + +   + L 
Sbjct: 236 LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLS 295

Query: 559 LF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +F   R    EPNE +  S++ AC     L  G Q+H  V  + F E+ F+SS L+DMY 
Sbjct: 296 VFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYG 355

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C                +  AW+S++S +G HG G +AI+ F  M + G++P   + IS
Sbjct: 356 KCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFIS 415

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LL+ CSH+GLV+EGL Y+ +M + Y V P  EH+ C++D+LGR+G+L+EA EFI  +P +
Sbjct: 416 LLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFE 475

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           P    W + L AC  HGD +MGK  AE L KLEP+N G  + LSN+Y    +W+D
Sbjct: 476 PNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 530



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 241/533 (45%), Gaps = 53/533 (9%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  L  ++    +   L++G+ +H L I AG    + L N  VNMY+KCG+L+ +   F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW  ++SG   N+   + +  F  M   GE     + SSA+ A A LG + 
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +H L +K G     +V   ++L  MYS+CG +  A + F  M CKD VSW A+IDG
Sbjct: 124 MGKQMHCLALKFGIGSELFVG--SNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           ++  G+FEEA     +M +   V  D   + + +  C      + GRSVH   ++     
Sbjct: 182 YSKIGEFEEALLAFKKM-IDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+ + N+L D YSK+  +  A  +F   +   ++VS+  +I G            +F E+
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 360 LYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  ++F+FS+L   + +C +  +LE G  +H   +K+ F  +    + L+ MY  C
Sbjct: 301 RRQGIEPNEFTFSSL---IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 357

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A      I   ++ + WN ++    Q+G  ++AIK F+ M   +   P+++T ++
Sbjct: 358 GLLEHAIQAFDEIGDPTEIA-WNSLVSVFGQHGLGKDAIKFFERMV-DRGVKPNAITFIS 415

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +++ C +  L  EG       L     +D          YG     +             
Sbjct: 416 LLTGCSHAGLVEEG-------LDYFYSMD--------KTYGVVPGEEH------------ 448

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
              ++C+I    +      A E    + FEPN     S L AC   G    GK
Sbjct: 449 ---YSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGK 498



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 201/451 (44%), Gaps = 18/451 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS     + +L LF     +++V+W AMI+   +N      +  F  M   G    
Sbjct: 46  LVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                  + A   +  ++ G+ +HCL++K G+ ++  + +   +MY+KCG +  +   F 
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFE 165

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M C D VSW  ++ G       E+ LL F++M       D   L S + A   L    +
Sbjct: 166 EMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKF 225

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW-GMTCKDVVSWNAIIDG 251
           G+ +H+  +KLG+E   +V   N+L  MYS+ GD+E+A   F     C++VVS+  +IDG
Sbjct: 226 GRSVHSSVVKLGFESDIFVG--NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 283

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +    + E+   +  E++  + +EP+  T  +LI  CA+   L +G  +H   ++     
Sbjct: 284 YVETEQIEKGLSVFVELR-RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEM 359
           D  + + L+D Y K   L  A   F+ I    + ++WNS++S              F+ M
Sbjct: 343 DPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKFFERM 401

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +    + +  T +++L  C+    +E G    +      G        + ++ +    G 
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           L  A   + R+    +   W   + AC  +G
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 166/354 (46%), Gaps = 7/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++L   YS       +  +F E   KD V+W AMI    +       L  F
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++E +  D   L   + A   +   K GR VH   +K G  +D  + N   +MY+K 
Sbjct: 196 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 255

Query: 122 GDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           GD+ S+   F     C + VS+  ++ G +     EK L  F E+   G + +  + SS 
Sbjct: 256 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A    L  G  +HA  +K+ +++ P+VS  + L+ MY +CG +E A +AF  +   
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIGDP 373

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             ++WN+++  F  +G  ++A      M + R V+P+  T ++L++ C+ + L+ EG   
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKFFERM-VDRGVKPNAITFISLLTGCSHAGLVEEGLD- 431

Query: 301 HGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           + Y++ +  G        + ++D   ++  L +A+   N +    +   W S +
Sbjct: 432 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 320/616 (51%), Gaps = 49/616 (7%)

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           + G++LG          N+++SM  + G+I  A R F  M  +DV SWN ++ G+   G 
Sbjct: 128 SFGLRLG----------NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGF 177

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA DL + M L   + PD+ T   ++  C      R GR VH + +R   G ++ ++N
Sbjct: 178 LEEALDLYYRM-LWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLN 236

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           +L+  Y+K   +  A  +F+ +A + D +SWN+MI+G            LF  ML    Q
Sbjct: 237 ALVTMYAKCGDIVAARKVFDGMA-VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQ 295

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T+ ++  +      + F K +H + +K GF+ +    N+L+ MY + G +  A  +
Sbjct: 296 PNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKI 355

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---G 482
             R+    D   W  +I    +NG   +A++ + ++ +  N SPD VT+ + ++AC   G
Sbjct: 356 FSRME-TKDAMSWTAMISGYEKNGFPDKALEVY-ALMELHNVSPDDVTIASALAACACLG 413

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L++   G  LH LA          V NAL+ MY + + I  A  VF+     ++ +W+ 
Sbjct: 414 RLDV---GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 470

Query: 543 MISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           MI+ F  N     AL  FR++    +PN ++ ++ LSAC   G LR GK+IH +V   G 
Sbjct: 471 MIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI 530

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
               ++ +ALLD+Y  C               K   +W+ M+S +  HG G  A+ LF++
Sbjct: 531 GSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQ 590

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G  P + + ++LL ACS +G+V +G + ++ M E++ + P  +H+ C+VD+L R G
Sbjct: 591 MVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVG 650

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           KL EAY  I  +PI+P   VWGA+L+ C  H   ++G+  A+++ +LEP +V Y++ L +
Sbjct: 651 KLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCD 710

Query: 766 MYVALGRWKDAVEIGK 781
           +Y   G+W     + K
Sbjct: 711 LYTDAGKWAQVARVRK 726



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 261/558 (46%), Gaps = 22/558 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    +   +   L  +  M+  G+R D  T   ++     +  
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR VH   ++ G   +  + N  V MYAKCGD+ ++   F GM   D +SWN +++G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N+  E  L  F  M  +  Q + ++++S   AS  L E+ + K +H   +K G+   
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MY+  G +  A + F  M  KD +SW A+I G+  NG  ++A ++   M
Sbjct: 333 --VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +L  +V PD  T+ + ++ CA    L  G  +H  A  +     +++ N+L++ Y+KS  
Sbjct: 391 EL-HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           + KA  +F  +A   D+VSW+SMI+G             F+ ML      S  T +A L 
Sbjct: 450 IDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSV-TFIAALS 507

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +L  GK IH + L+ G  +     NAL+ +Y+ CG    A++    +    D  
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS-VHSEKDVV 566

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-HG 495
            WNI++     +G    A+  F  M  +    PD VT V ++ AC    +  +G  L H 
Sbjct: 567 SWNIMLSGFVAHGLGDIALSLFNQMV-EMGEHPDEVTFVALLCACSRAGMVIQGWELFHM 625

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AE 553
           +  K  +  + +    ++ +  R   +  A  +        +   W  +++    ++  E
Sbjct: 626 MTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVE 685

Query: 554 VRALELFRHLEFEPNEIS 571
           +  L     LE EPN+++
Sbjct: 686 LGELAAKVILELEPNDVA 703



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 286/626 (45%), Gaps = 48/626 (7%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G++  +   F+ M   D  SWN ++ G     + E+ L  +  M W+G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +    +     + +   G+ +HA  ++ G+ D   V V N+L++MY++CGDI A
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDE--VDVLNALVTMYAKCGDIVA 250

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A + F GM   D +SWNA+I G   N + E   +L   M L   V+P++ T+ ++    A
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTM-LENEVQPNLMTITSVT--VA 307

Query: 290 DSLLLREG--RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
             +L   G  + +HG+A++R    D+   NSL+  Y+    +  A  +F+ +    D +S
Sbjct: 308 SGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME-TKDAMS 366

Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
           W +MISG  K        E+  L    + S    T+ + L +C     L+ G  +H    
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             GF    +  NAL+ MY     +  A  + + ++   D   W+ +I     N    EA+
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFEAL 485

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F+ M    +  P+SVT +  +SAC        GK +H   L+  +G +  V NAL+ +
Sbjct: 486 YYFRYML--GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDL 543

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISI 572
           Y +C     A   F      ++ +WN M+S F  +     AL LF     +   P+E++ 
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF 603

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           V++L AC++ G++  G ++    FH+  ++ S +         N K  A    ++S    
Sbjct: 604 VALLCACSRAGMVIQGWEL----FHMMTEKFSIV--------PNLKHYACMVDLLSRV-- 649

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ET 691
            GK  EA  L + M    I+P  +   +LL+ C     V+ G      +LE   + P + 
Sbjct: 650 -GKLTEAYNLINRM---PIKPDAAVWGALLNGCRIHRHVELGELAAKVILE---LEPNDV 702

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +HV + D+   +GK  +     K +
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTM 728



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 221/469 (47%), Gaps = 28/469 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T Y+      ++  +F      D ++WNAMI    EN     GL  F
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELF 286

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  ++ +  T+  +  A   ++ +   + +H  ++K G   D + CN  + MY   
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS M   D +SW  ++SG   N +P+K L  +  M       D+V+++SA+
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA ACLG L  G  +H L    G+    YV V N+L+ MY++   I+ A   F  M  KD
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIR--YVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 464

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+++I GF  N +  EA  L +   ++  V+P+  T +  +S CA +  LR G+ +H
Sbjct: 465 VVSWSSMIAGFCFNHRSFEA--LYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIH 522

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y +R  +G +  + N+L+D Y K    S A   F ++    D+VSWN M+SG       
Sbjct: 523 AYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL------KLGFSNNT 403
                LF +M+ +       T +A+L +C+       G  I  W+L      K     N 
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRA-----GMVIQGWELFHMMTEKFSIVPNL 636

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
                ++ +    G L  A++L+ R+    D + W  ++  C  + H +
Sbjct: 637 KHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVE 685



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 167/360 (46%), Gaps = 15/360 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  Y+++     +  +F     KD ++W AMI+   +N      L  
Sbjct: 327 RGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEV 386

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G I    + N  + MYAK
Sbjct: 387 YALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAK 446

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   F  M   D VSW+++++G   N+   + L YFR M     + ++V+  +A
Sbjct: 447 SKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAA 505

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A  G L  GK IHA  ++ G     YV   N+L+ +Y +CG    A   F   + K
Sbjct: 506 LSACAATGALRSGKEIHAYVLRCGIGSEGYVP--NALLDLYVKCGQTSYAWAQFSVHSEK 563

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN ++ GF  +G  + A  L ++M  M    PD  T V L+  C+     R G  +
Sbjct: 564 DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACS-----RAGMVI 617

Query: 301 HGYAIRRLLGYDLLMMNSL------MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G+ +  ++     ++ +L      +D  S+   L++A  L N +    D   W ++++G
Sbjct: 618 QGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNG 677


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 334/644 (51%), Gaps = 53/644 (8%)

Query: 182 AASAC----LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           AA +C    +G  + G+ +HAL  KLG    P+V   NSL+SMY +CG +E AE+ F G+
Sbjct: 72  AARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVG--NSLVSMYGRCGRVEDAEKVFGGI 129

Query: 238 --TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               +++VSWNA++   AL+G      +L  +  +      D AT+VT++ +CA      
Sbjct: 130 PDAARNIVSWNALM--AALSGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSE 187

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
            GR+VHG A +        + N+L+D Y+K   L+ AE  F   AP   +VSWN M+   
Sbjct: 188 TGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPE-AP--SVVSWNVMLGAY 244

Query: 354 ----------GLFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                     GL ++M    +        T+L++LP+C+ P  L   + +H + ++ G  
Sbjct: 245 TRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLD 304

Query: 401 NNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +  V NAL+  Y  CG L+ A  +   I   +  S WN +I A  Q  +   AI+ F 
Sbjct: 305 AASDKVPNALVAAYGRCGRLLHADRVFTDIRRKT-VSSWNTLISAHAQQ-NTAAAIELFI 362

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            MT      PD  ++ +++ AC + +     K+ HG  L++ +  DT ++ +L++ Y RC
Sbjct: 363 QMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRC 422

Query: 520 -RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE----ISIVS 574
            R    A  +F++        W  MIS +SQN     +L+LFR ++         IS  S
Sbjct: 423 SRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATS 482

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------K 618
            L AC++L  +R GK++H         ++ F+SS+L+DMYS C                 
Sbjct: 483 ALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARD 542

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +  +W++MI+ Y  +G G EA+EL+ +M   G+ P + + + LL AC H+G+++EGL+++
Sbjct: 543 AKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFF 602

Query: 679 NNML-EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + M    + +  + EH+ C++ ML R+G+  +A   +  +P +P   +  ++LSAC  HG
Sbjct: 603 DEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHG 662

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + ++G  VAE L +LEP+   +Y+  SNMY    RW D  ++ K
Sbjct: 663 EAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRK 706



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 188/697 (26%), Positives = 311/697 (44%), Gaps = 77/697 (11%)

Query: 67  EGIRFDSTTLLIIVSA--LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           EGI  D  TL     +    ++     GR VH L+ K G+  D  + N  V+MY +CG +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 125 NSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNVSLSSAV 181
             +E  F G+  A  + VSWN +M+    +  P + L  FR+ +   G   D  +L + +
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A LG    G+ +H L  K G+ D+P   V N+L+ MY++CG++  AERAF       
Sbjct: 178 PMCAALGWSETGRAVHGLAAKSGW-DAP-ARVGNALVDMYAKCGELADAERAF--PEAPS 233

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRS 299
           VVSWN ++  +  N +   AF LL +MQ+    SV  D  TV++++  C+    L   R 
Sbjct: 234 VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE 293

Query: 300 VHGYAIRRLLGYDLL---MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           +H + +RR  G D     + N+L+  Y +   L  A+ +F  I     + SWN++IS   
Sbjct: 294 LHAFTVRR--GLDAASDKVPNALVAAYGRCGRLLHADRVFTDIR-RKTVSSWNTLISAHA 350

Query: 355 ---------LFKEMLYLC----SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                    LF +M   C      FS  +LL    +C  P+ L   K+ H + L+ G   
Sbjct: 351 QQNTAAAIELFIQMTNACGLKPDGFSIGSLLM---ACADPKHLLHVKATHGFILRNGLER 407

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +T+   +L+  YI C        +L           W  +I   +QNG   E+++ F+ M
Sbjct: 408 DTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREM 467

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
              +      ++  + + AC  L     GK +H  ALK+ +  D  + ++LI MY +C  
Sbjct: 468 QSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGF 527

Query: 522 IKSASTVFESCYNCNL-CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILS 577
           ++ A T F+     +   +W  MI+ ++ N     A+EL+   R    EP+E + + +L 
Sbjct: 528 VEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLM 587

Query: 578 ACTQLGVLRHGKQI------HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG 631
           AC   G+L  G +       H H   +  +                     +S +I    
Sbjct: 588 ACGHAGMLEEGLRFFDEMRNHHHKIEVKLEH--------------------YSCVIGMLS 627

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPE 690
             G+  +A+ L  EM      P    + S+LSAC   G  + G      +LE E D   +
Sbjct: 628 RAGRFADAVALMAEMPQE---PDAKILSSVLSACHIHGEAELGSDVAERLLELEPD---K 681

Query: 691 TEHHVCIVDMLGRSGK---LQEAYEFIKNLPIQPKPG 724
            EH+V   +M   S +   +++  + +++  I  +PG
Sbjct: 682 AEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPG 718



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 155/609 (25%), Positives = 269/609 (44%), Gaps = 61/609 (10%)

Query: 12  SLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGE-MVEEG 68
           SL++ Y      E +  +F       +++V+WNA++ A   +     GL  F + +V  G
Sbjct: 108 SLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGD--PRRGLELFRDCLVAVG 165

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              D  TL+ ++     +   + GR VH L+ K+G  A + + N  V+MYAKCG+L  +E
Sbjct: 166 GMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAE 225

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLSSAVAASA 185
             F        VSWN ++     N          R+M         AD +++ S + A +
Sbjct: 226 RAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACS 283

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              ELS  + +HA  ++ G  D+    V N+L++ Y +CG +  A+R F  +  K V SW
Sbjct: 284 GPTELSRLRELHAFTVRRGL-DAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSW 342

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I   A       A +L  +M     ++PD  ++ +L+  CAD   L   ++ HG+ +
Sbjct: 343 NTLISAHAQQNT-AAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFIL 401

Query: 306 RRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           R  L  D ++  SL+  Y + S +   A +LF+A+    +++ W +MISG          
Sbjct: 402 RNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVL-WIAMISGYSQNGLPGES 460

Query: 355 --LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             LF+EM  +   CS    +T  + L +C+   S+  GK +HC+ LK    ++    ++L
Sbjct: 461 LQLFREMQSVEGHCSSVISAT--SALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSL 518

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A +   R+        W  +I     NG  +EA++ +  M +++   P
Sbjct: 519 IDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKM-RREGMEP 577

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T + ++ ACG+  +  EG                      +  +   R+      V 
Sbjct: 578 DEFTYLGLLMACGHAGMLEEG----------------------LRFFDEMRNHHHKIEV- 614

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                  L  ++C+I   S+      A+ L   +  EP+   + S+LSAC   G    G 
Sbjct: 615 ------KLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGS 668

Query: 590 QIHGHVFHL 598
            +   +  L
Sbjct: 669 DVAERLLEL 677



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 27/254 (10%)

Query: 438 WNIVIVACTQNG-HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL--AFEGKSLH 494
           WN ++   ++ G H          +   +  +PD  TL     +CG L +  A  G+ +H
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC--NLCTWNCMISAFSQNKA 552
            LA K  +  D  V N+L++MYGRC  ++ A  VF    +   N+ +WN +++A S +  
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALSGDPR 151

Query: 553 EVRALELFRH----LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             R LELFR     +    +E ++V++L  C  LG    G+ +HG     G+   + + +
Sbjct: 152 --RGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 609 ALLDMYSNC-------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC---NSGIR 652
           AL+DMY+ C              S  +W+ M+ AY  + +   A  L  +M    +  + 
Sbjct: 210 ALVDMYAKCGELADAERAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVP 269

Query: 653 PTKSSVISLLSACS 666
             + +V+S+L ACS
Sbjct: 270 ADEITVLSVLPACS 283


>gi|302808039|ref|XP_002985714.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
 gi|300146623|gb|EFJ13292.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
          Length = 659

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/664 (28%), Positives = 339/664 (51%), Gaps = 48/664 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           +  ++     +N P       R+M   G   + ++L   ++A   L  +  G  IH   I
Sbjct: 4   YTALIGAYARSNDPLAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQWII 63

Query: 202 KLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            LG + DS    +  +L++ +++CG ++ A+ AF  +  KD+++WNAII   + + +  +
Sbjct: 64  DLGLHRDS---VLGTALLTTFARCGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHD 120

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM-NSL 319
           A DL   MQL   + P+  T+V ++S+  +S    + R+VH  A+   +    + + NS+
Sbjct: 121 ALDLFRRMQL-DGIHPNAITLVAVLSIFQESST--DARAVHSLAMESAMDASTVAVGNSI 177

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSF 368
           ++ Y++   L +A L F  I   N +VSWN MIS            +F  M+    +   
Sbjct: 178 VNMYARCRDLDRARLAFARIQSKN-VVSWNVMISAHSQLDRLHPLAMFHAMMLEGIKADA 236

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSN----NTIGVNALMHMYINCGDLVAAFS 424
           +T + +     +P  L  G+ +H    +LG       + +   +L+ M+  CG +  A  
Sbjct: 237 TTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARE 296

Query: 425 LLQR--ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           + +     H  +   WN +I A  QN  F +A+  F++M Q Q    D++T V+ I AC 
Sbjct: 297 IFRENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTM-QLQGVPSDAITFVSTIDACT 355

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            LE    G++LHG+  +S +  DT V  AL+  Y + R + +A+  F+  +  +L  WN 
Sbjct: 356 ALEDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIHEPDLVAWNV 415

Query: 543 MISAFSQNKAEVRALELFRH-LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +I+A   N     ALE+F H +E +P+ I+ ++ L+AC     L  G+++H  +   G  
Sbjct: 416 LIAAHVDNANSSTALEIFFHRMELKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLH 475

Query: 602 ENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
            +  ++SAL+DMYS C                +++A W+++I+ +  HG    A  L  E
Sbjct: 476 SDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVRE 535

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G+ P   + + LL AC+H+GL+++G +++  ++E+  +  + EH+ C+VD+LGR+G
Sbjct: 536 MQLEGVEPDSLTYVGLLLACTHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAG 595

Query: 706 KLQEAYEFI----KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           KL EA EF+    + +P+     +W ++LSA   HGD ++ ++ A  +  LEP +   ++
Sbjct: 596 KLAEAEEFLLGLRRAMPVAVSAAMWTSLLSAYGVHGDMELARRAARRVLDLEPRHPAAFV 655

Query: 762 SLSN 765
            LSN
Sbjct: 656 VLSN 659



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 173/643 (26%), Positives = 291/643 (45%), Gaps = 58/643 (9%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V  + A+I A   +   +       +M  +GI  +  TL+ I+SA T ++ +  G  +H 
Sbjct: 1   VAMYTALIGAYARSNDPLAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQ 60

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
             I  G+  DS L    +  +A+CG L+ ++  F+ +   D ++WN I++   H+N    
Sbjct: 61  WIIDLGLHRDSVLGTALLTTFARCGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHD 120

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSY-GKVIHALGIKLGYEDSPYVSVTNS 216
            L  FR M   G   + ++L   VA  +   E S   + +H+L ++    D+  V+V NS
Sbjct: 121 ALDLFRRMQLDGIHPNAITL---VAVLSIFQESSTDARAVHSLAMESAM-DASTVAVGNS 176

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           +++MY++C D++ A  AF  +  K+VVSWN +I   +   +      + H M ++  ++ 
Sbjct: 177 IVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLHP-LAMFHAM-MLEGIKA 234

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIR----RLLGYDLLMMNSLMDFYSKSNSLSKA 332
           D  T V L S  A    LR+G  +H  A      R L YD ++  SL+  ++K  S++ A
Sbjct: 235 DATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHA 294

Query: 333 ELLF--NAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSC 378
             +F  N      + V WN++I+ L     F + L L              T ++ + +C
Sbjct: 295 REIFRENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDAC 354

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            + E    G+++H    +     +TI   AL++ Y     L AA +  QRI H  D   W
Sbjct: 355 TALEDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRI-HEPDLVAW 413

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N++I A   N +   A++ F     +    PD +T +  ++AC        G+ LH    
Sbjct: 414 NVLIAAHVDNANSSTALEIF---FHRMELKPDRITFITTLAACVTASALPLGRRLHEQIR 470

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRAL 557
           +  +  D  V +AL+ MY +C  ++ A  VF +     N  TWN +I+  +Q+    RA 
Sbjct: 471 QRGLHSDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGHAQHGFSGRAP 530

Query: 558 ELFRHLEF---EPNEISIVSILSACTQLGVLRHG---------------KQIH------- 592
            L R ++    EP+ ++ V +L ACT  G+L  G               K+ H       
Sbjct: 531 SLVREMQLEGVEPDSLTYVGLLLACTHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDL 590

Query: 593 -GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
            G    L   E   +   L        S A W+S++SAYG HG
Sbjct: 591 LGRAGKLAEAEEFLL--GLRRAMPVAVSAAMWTSLLSAYGVHG 631



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/595 (26%), Positives = 266/595 (44%), Gaps = 39/595 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LLT ++     + + A F     KD++ WNA+ITA   +      L  F  M  +GI 
Sbjct: 75  TALLTTFARCGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHDALDLFRRMQLDGIH 134

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSEC 129
            ++ TL+ ++S   + +     R VH L++++ M A + ++ N  VNMYA+C DL+ +  
Sbjct: 135 PNAITLVAVLSIFQESST--DARAVHSLAMESAMDASTVAVGNSIVNMYARCRDLDRARL 192

Query: 130 TFSGMHCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            F+ +   + VSWN ++S    L   +P   L  F  M   G +AD  +  +  +  A  
Sbjct: 193 AFARIQSKNVVSWNVMISAHSQLDRLHP---LAMFHAMMLEGIKADATTFVNLASGLAAP 249

Query: 188 GELSYGKVIHALGIKLGYEDS-PYVSV-TNSLISMYSQCGDIEAAERAFW-GMTC--KDV 242
             L  G+++H    +LG   +  Y +V   SL++M+++CG +  A   F     C  ++ 
Sbjct: 250 SPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHAREIFRENFHCHERNP 309

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V WNAII     N  F +A  L   MQL + V  D  T V+ I  C        GR++HG
Sbjct: 310 VVWNAIIAALVQNHDFSDALLLFRTMQL-QGVPSDAITFVSTIDACTALEDFPTGRALHG 368

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
                 L  D ++  +L++FYSKS  L  A   F  I    DLV+WN +I+         
Sbjct: 369 IISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIHE-PDLVAWNVLIAAHVDNANSS 427

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F  M     + +F T LA   +C +  +L  G+ +H    + G  ++ +  +AL
Sbjct: 428 TALEIFFHRMELKPDRITFITTLA---ACVTASALPLGRRLHEQIRQRGLHSDVVVASAL 484

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A+ +   ++   +++ WN +I    Q+G    A    + M Q +   P
Sbjct: 485 VDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREM-QLEGVEP 543

Query: 470 DSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           DS+T V ++ AC +  L  +G K    L     + +       ++ + GR   +  A   
Sbjct: 544 DSLTYVGLLLACTHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAGKLAEAEEF 603

Query: 529 FESCYNC-----NLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
                       +   W  ++SA+      E+      R L+ EP   +   +LS
Sbjct: 604 LLGLRRAMPVAVSAAMWTSLLSAYGVHGDMELARRAARRVLDLEPRHPAAFVVLS 658



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 143/293 (48%), Gaps = 11/293 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCN---KDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +TSL+T ++       +  +F E  +   ++ V WNA+I A V+N      L  F  M  
Sbjct: 278 ATSLVTMFAKCGSVAHAREIFRENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQL 337

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +G+  D+ T +  + A T +     GR +H +  ++ +  D+ +    VN Y+K   L++
Sbjct: 338 QGVPSDAITFVSTIDACTALEDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDA 397

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASA 185
           +   F  +H  D V+WN +++  + N      L ++F  M     + D ++  + +AA  
Sbjct: 398 ATAAFQRIHEPDLVAWNVLIAAHVDNANSSTALEIFFHRMEL---KPDRITFITTLAACV 454

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVS 244
               L  G+ +H    + G      V V ++L+ MYS+CG +E A + F  M   ++  +
Sbjct: 455 TASALPLGRRLHEQIRQRGLHSD--VVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSAT 512

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           WNA+I G A +G    A  L+ EMQL   VEPD  T V L+  C  + LL +G
Sbjct: 513 WNALIAGHAQHGFSGRAPSLVREMQL-EGVEPDSLTYVGLLLACTHAGLLEDG 564


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 197/605 (32%), Positives = 314/605 (51%), Gaps = 43/605 (7%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           ++N LI+MY +C   ++A   F GM  ++ VSW A+I   A N +  +A  L   M L  
Sbjct: 82  LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM-LRL 140

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              PD   + + +  CA+   L  GR VH  AI+   G  L++ N+L+  YSKS S+   
Sbjct: 141 GTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDG 200

Query: 333 ELLFNAIAPMNDLVSWNSMISGL------------FKEM----LYLCSQFSFSTLLAILP 376
             LF  I    DL SW S+I+GL            F+EM    ++  ++F F +   +  
Sbjct: 201 FALFERIRD-KDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGS---VFR 256

Query: 377 SCNSP-ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           +C+    SLE+G+ IH   +K     N+    +L  MY  C  L +A  +  RI  + D 
Sbjct: 257 ACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRI-ESPDL 315

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I A + +G   EA+  F  M +  +  PD +T++ ++ AC   +   +G+S+H 
Sbjct: 316 VSWNSLINAFSADGLLSEAMVLFSEM-RYSSLKPDGITVMALLCACVGCDALRQGRSIHS 374

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K  +G D  V N+LI+MY RC D  SA  VF    + ++ TWN +++A  Q++    
Sbjct: 375 YLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMED 434

Query: 556 ALELFRHLEFE-P--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
             +LFR L    P  + IS+ ++LSA  +LG     KQ+H + F +G   ++ +S+AL+D
Sbjct: 435 VFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALID 494

Query: 613 MYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            Y+ C                +   +WSS+I  Y   G   EA++LF  M N G++P   
Sbjct: 495 TYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHV 554

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + + +L ACS  GLVDEG  YY+ M  EY + P  EH  C++D+L R+G+L EA +F+  
Sbjct: 555 TFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQ 614

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P +P   +W  +L+A   H D +MGK+ AE +  ++P +   Y+ L N+Y + G W + 
Sbjct: 615 MPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEF 674

Query: 777 VEIGK 781
             + K
Sbjct: 675 ARLKK 679



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 264/529 (49%), Gaps = 31/529 (5%)

Query: 84  TQMNCLKQGRVVH--CLSIKAG---MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +++    QGR+VH   L+  AG   +  ++ L N  + MY +C   +S+   F GM   +
Sbjct: 51  SRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRN 110

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            VSW  +++    N+     +  F  M   G   D  +L SAV A A LG+L  G+ +HA
Sbjct: 111 PVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHA 170

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             IK   ++  ++ V N+L++MYS+ G +      F  +  KD+ SW +II G A  G+ 
Sbjct: 171 QAIK--SDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGRE 228

Query: 259 EEAFDLLHEMQLMRSVEPD---IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
            +A  +  EM       P+     +V    S+  +S  L  G  +HG  ++  L  +   
Sbjct: 229 MDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINS--LEYGEQIHGLCVKYKLDRNSYA 286

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS- 369
             SL D Y++ N L  A  +F  I    DLVSWNS+I+     GL  E + L S+  +S 
Sbjct: 287 GCSLGDMYARCNKLDSAMKVFYRIES-PDLVSWNSLINAFSADGLLSEAMVLFSEMRYSS 345

Query: 370 ------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                 T++A+L +C   ++L  G+SIH + +KLG   + +  N+L+ MY  C D  +A 
Sbjct: 346 LKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAM 405

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +    +++ D   WN ++ AC Q+ H ++  K F+ +      S D ++L NV+SA   
Sbjct: 406 DVFHE-TNDRDVVTWNSILTACVQHRHMEDVFKLFR-LLHSSMPSLDRISLNNVLSASAE 463

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNC 542
           L      K +H  A K  +  D  + NALI  Y +C  +  A+ +FE      ++ +W+ 
Sbjct: 464 LGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSS 523

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
           +I  ++Q      AL+LF   R+L  +PN ++ V +L AC+++G++  G
Sbjct: 524 LIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG 572



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 260/555 (46%), Gaps = 25/555 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCV-VMGLHFFGEMVEE 67
           S  L+T Y   +  +S+  +F    +++ V+W A+I A  +N RC   MGL  F  M+  
Sbjct: 83  SNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGL--FSSMLRL 140

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D   L   V A  ++  L  GR VH  +IK+       + N  V MY+K G +   
Sbjct: 141 GTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDG 200

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV--AASA 185
              F  +   D  SW +I++G          L  FREM   G    N     +V  A S 
Sbjct: 201 FALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSV 260

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +  L YG+ IH L +K   + + Y     SL  MY++C  +++A + F+ +   D+VSW
Sbjct: 261 VINSLEYGEQIHGLCVKYKLDRNSYAGC--SLGDMYARCNKLDSAMKVFYRIESPDLVSW 318

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N++I+ F+ +G   EA  L  EM+   S++PD  TV+ L+  C     LR+GRS+H Y +
Sbjct: 319 NSLINAFSADGLLSEAMVLFSEMRY-SSLKPDGITVMALLCACVGCDALRQGRSIHSYLV 377

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +  LG D+++ NSL+  Y++      A  +F+      D+V+WNS+++            
Sbjct: 378 KLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETND-RDVVTWNSILTACVQHRHMEDVF 436

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF+ +          +L  +L +       E  K +H +  K+G  ++ I  NAL+  Y
Sbjct: 437 KLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTY 496

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A  L + +    D   W+ +IV   Q G+ +EA+  F  M +     P+ VT
Sbjct: 497 AKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARM-RNLGVKPNHVT 555

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRC-RDIKSASTVFES 531
            V V+ AC  + L  EG   + +       + T+   + +I +  R  R  ++A  V + 
Sbjct: 556 FVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQM 615

Query: 532 CYNCNLCTWNCMISA 546
            +  ++  WN +++A
Sbjct: 616 PFEPDIIMWNTLLAA 630



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 224/501 (44%), Gaps = 31/501 (6%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
            HL    +L+T YS         ALF    +KD+ +W ++I    +    +  LH F EM
Sbjct: 179 GHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREM 238

Query: 65  VEEGIRFDSTTLL--IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           + EG+   +      +  +    +N L+ G  +H L +K  +  +S       +MYA+C 
Sbjct: 239 IAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCN 298

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+S+   F  +   D VSWN++++    +    + ++ F EM +S  + D +++ + + 
Sbjct: 299 KLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLC 358

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A      L  G+ IH+  +KLG      V V NSLISMY++C D  +A   F     +DV
Sbjct: 359 ACVGCDALRQGRSIHSYLVKLGLGGD--VMVCNSLISMYTRCLDFPSAMDVFHETNDRDV 416

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGRSV 300
           V+WN+I+     +   E+ F L    +L+ S  P  D  ++  ++S  A+       + V
Sbjct: 417 VTWNSILTACVQHRHMEDVFKLF---RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQV 473

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H YA +  L  D ++ N+L+D Y+K  SL  A  LF  +    D+ SW+S+I G      
Sbjct: 474 HAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGY 533

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-----QLKLGFSNNT 403
                 LF  M  L  + +  T + +L +C+    ++ G    C+     + + G     
Sbjct: 534 AKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG----CYYYSIMEPEYGIVPTK 589

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              + ++ +    G L  A   + ++    D   WN ++ A   +   +   +  + +  
Sbjct: 590 EHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLN 649

Query: 464 -QQNASPDSVTLVNVISACGN 483
              + S   V L N+ ++ GN
Sbjct: 650 IDPSHSAAYVLLCNIYASSGN 670


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 299/597 (50%), Gaps = 33/597 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           NS +    + G +  +   F  MT +D +SW  +I G+       EA  L   M +   +
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D   +   +  C   + +  G  +HG++++  L   + + ++L+D Y K   + +   
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  +   N +VSW ++I+GL            F EM      +   T    L +     
Sbjct: 214 VFKKMTKRN-VVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK+IH   +K GF  ++  +N L  MY  CG       L +++    D   W  +I
Sbjct: 273 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKM-PDVVSWTTLI 331

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q G  + A++ FK M ++ N SP+  T   VISAC NL +A  G+ +HG  L+  +
Sbjct: 332 TTYVQKGEEEHAVEAFKRM-RKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGL 390

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
                V N+++T+Y +   +KSAS VF      ++ +W+ +I+ +SQ      A +    
Sbjct: 391 VDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSW 450

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           +  E   PNE ++ S+LS C  + +L  GKQ+H HV  +G    + + SAL+ MYS C S
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGS 510

Query: 620 NA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                            +W++MI+ Y  HG   EAI LF ++ + G++P   + I +L+A
Sbjct: 511 VEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTA 570

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH+G+VD G  Y+  M  EY + P  EH+ CI+D+L R+G+L EA   I+++P      
Sbjct: 571 CSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDV 630

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +L +C  HGD   G+  AE L +L+P + G +I+L+N+Y A GRWK+A  I K
Sbjct: 631 VWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRK 687



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 241/479 (50%), Gaps = 28/479 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIVSALTQMN 87
           +F +  ++D ++W  +I   V        L  F  M V+ G++ D   + + + A     
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGV 171

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            +  G ++H  S+K+G+I    + +  ++MY K G +      F  M   + VSW  I++
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIA 231

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G +H  Y  + LLYF EM  S    D+ + + A+ ASA    L +GK IH   IK G+++
Sbjct: 232 GLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 291

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S +  V N+L +MY++CG  +   R F  M   DVVSW  +I  +   G+ E A +    
Sbjct: 292 SSF--VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKR 349

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+   +V P+  T   +IS CA+  + + G  +HG+ +R  L   L + NS++  YSKS 
Sbjct: 350 MR-KSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSG 408

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEML-YLC---------SQFSFSTLL 372
            L  A L+F+ I    D++SW+++I+     G  KE   YL          ++F+ S++L
Sbjct: 409 LLKSASLVFHGIT-RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 467

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++   C S   LE GK +H   L +G  +  +  +AL+ MY  CG +  A  +   +  N
Sbjct: 468 SV---CGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKIN 524

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
           +  S W  +I    ++G+ QEAI  F+ ++      PD VT + V++AC   G ++L F
Sbjct: 525 NIIS-WTAMINGYAEHGYSQEAINLFEKIS-SVGLKPDYVTFIGVLTACSHAGMVDLGF 581



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 246/517 (47%), Gaps = 40/517 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  S++L+  Y  V   E    +F +   ++VV+W A+I   V     +  L +F
Sbjct: 187 GLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYF 246

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    + +DS T  I + A    + L  G+ +H  +IK G    S + N    MY KC
Sbjct: 247 SEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC 306

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  +     F  M   D VSW T+++  +     E  +  F+ M  S    +  + ++ +
Sbjct: 307 GKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVI 366

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L    +G+ IH   ++LG  D+  +SV NS++++YS+ G +++A   F G+T KD
Sbjct: 367 SACANLAIAKWGEQIHGHVLRLGLVDA--LSVANSIVTLYSKSGLLKSASLVFHGITRKD 424

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW+ II  ++  G  +EAFD L  M+     +P+   + +++S+C    LL +G+ VH
Sbjct: 425 IISWSTIIAVYSQGGYAKEAFDYLSWMR-REGPKPNEFALSSVLSVCGSMALLEQGKQVH 483

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +   + ++ ++ ++L+  YSK  S+ +A  +FN +  +N+++SW +MI+G       
Sbjct: 484 AHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGM-KINNIISWTAMINGYAEHGYS 542

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA- 408
                LF+++  +  +  + T + +L +C+           H   + LGF    +  N  
Sbjct: 543 QEAINLFEKISSVGLKPDYVTFIGVLTACS-----------HAGMVDLGFYYFMLMTNEY 591

Query: 409 -----------LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
                      ++ +    G L  A  +++ +   +D   W+ ++ +C  +G       T
Sbjct: 592 QISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWT 651

Query: 458 FKSMTQ-QQNASPDSVTLVNVISACGNLELAFEGKSL 493
            + + +   N++   + L N+ +A G  + A   + L
Sbjct: 652 AEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKL 688


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 312/602 (51%), Gaps = 35/602 (5%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P    + SL+   +  G ++ A  A   +   D    N +I GFA +          +  
Sbjct: 39  PKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFA-DAGLPAGALAAYRG 97

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L     PD  T   ++  CA    L EGR+ HG  I+  L +D+   NSL+ FY+K   
Sbjct: 98  MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML-YLCSQFSFSTLLAIL 375
           +  AE +F+ + P+ D+V+WN+M+ G             F+EM   L  Q     ++A L
Sbjct: 158 VEDAERVFDGM-PVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAAL 216

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C    S   GK IH + ++ G   +     +L+ MY  CG++  A S+   +   +  
Sbjct: 217 AACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVV 276

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           + WN +I     N    EA   F  M + +    + VT +N+++AC   E +  G+S+HG
Sbjct: 277 T-WNCMIGGYALNERPDEAFDCFMQM-RAEGLQVEVVTAINLLAACAQTESSLYGRSVHG 334

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             ++        ++ AL+ MYG+   ++S+  +F    N  L +WN MI+A+   +    
Sbjct: 335 YVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTE 394

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A+ LF  L      P+  ++ +++ A   LG LRH +QIH ++  LG+ EN+ I +A+L 
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+                 K   +W++MI  Y  HG+G  A+E+F EM  +G++P +S+
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+L+ACS SGLVDEG  ++N ML+EY + P+ EH+ C+ D+LGR G L+E  +FI+++
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESM 574

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           PI P   VWG++L+A  +  D  + +  AE +F+LE +N G YI LS+MY   GRW+D  
Sbjct: 575 PIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVE 634

Query: 778 EI 779
            +
Sbjct: 635 RV 636



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 171/589 (29%), Positives = 291/589 (49%), Gaps = 28/589 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +S SL+ + +     + ++         D    N MI    +       L  +  M+E+G
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDG 102

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            R D  T  ++V    ++  L +GR  H + IK G+  D   CN  V  YAK G +  +E
Sbjct: 103 ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACL 187
             F GM   D V+WNT++ G + N      L  F+EM  + E Q D+V + +A+A  AC 
Sbjct: 163 RVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA--ACC 220

Query: 188 GELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            E+S   GK IH   I+ G E    + V  SL+ MY +CG++  A   F  M  + VV+W
Sbjct: 221 LEVSSMQGKEIHGYVIRHGLEQD--IKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I G+ALN + +EAFD   +M+    ++ ++ T + L++ CA +     GRSVHGY +
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVV 337

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKEM----- 359
           RR     +++  +L++ Y K   +  +E +F  IA    LVSWN+MI+  ++KEM     
Sbjct: 338 RRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAI 396

Query: 360 ---LYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
              L L +Q     + T+  ++P+     SL   + IH + + LG++ NT+ +NA++HMY
Sbjct: 397 TLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMY 456

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              GD+VA+  +  ++  + D   WN +I+    +G  + A++ F  M +     P+  T
Sbjct: 457 ARSGDVVASREIFDKMV-SKDVISWNTMIMGYAIHGQGKTALEMFDEM-KYNGLQPNEST 514

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            V+V++AC    L  EG     L L+   G+  ++++   +  + GR  D++      ES
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEY-GMIPQIEHYGCMTDLLGREGDLREVLQFIES 573

Query: 532 C-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
              +     W  +++A  +QN  ++      R  + E +      +LS+
Sbjct: 574 MPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSS 622



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 257/566 (45%), Gaps = 38/566 (6%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +    + +   D    N ++ G      P   L  +R M   G + D  +    V
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A LG L  G+  H + IKLG E   Y    NSL++ Y++ G +E AER F GM  +D
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYT--CNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+WN ++DG+  NG    A     EM     V+ D   ++  ++ C   +   +G+ +H
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           GY IR  L  D+ +  SL+D Y K   ++ A  +F A  P+  +V+WN MI G       
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVF-ATMPLRTVVTWNCMIGGYALNERP 291

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M     Q    T + +L +C   ES  +G+S+H + ++  F  + +   AL
Sbjct: 292 DEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETAL 351

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY   G + ++  +  +I++ +  S WN +I A      + EAI  F  +  Q    P
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVS-WNNMIAAYMYKEMYTEAITLFLELLNQP-LYP 409

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T+  V+ A   L      + +H   +      +T + NA++ MY R  D+ ++  +F
Sbjct: 410 DYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIF 469

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
           +   + ++ +WN MI  ++ +     ALE+F  +++   +PNE + VS+L+AC+  G++ 
Sbjct: 470 DKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVD 529

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G  +H   F+L  QE   I                +  M    G  G   E ++    M
Sbjct: 530 EG-WMH---FNLMLQEYGMIPQI-----------EHYGCMTDLLGREGDLREVLQFIESM 574

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVD 672
               I PT     SLL+A  +   +D
Sbjct: 575 ---PIDPTSRVWGSLLTASRNQNDID 597



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   TSLL  Y        + ++F     + VVTWN MI     N         F
Sbjct: 239 GLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG++ +  T + +++A  Q      GR VH   ++   +    L    + MY K 
Sbjct: 299 MQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + SSE  F  +     VSWN +++  ++     + +  F E+       D  ++S+ V
Sbjct: 359 GKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVV 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG L + + IH+  I LGY ++    + N+++ MY++ GD+ A+   F  M  KD
Sbjct: 419 PAFVLLGSLRHCRQIHSYIIGLGYAENTL--IMNAVLHMYARSGDVVASREIFDKMVSKD 476

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN +I G+A++G+ + A ++  EM+    ++P+ +T V++++ C+ S L+ EG
Sbjct: 477 VISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFVSVLTACSVSGLVDEG 531



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R FL H+   T+LL  Y  V   ESS  +F +  NK +V+WN MI A +        +  
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++ + +  D  T+  +V A   +  L+  R +H   I  G   ++ + N  ++MYA+
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYAR 458

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD+ +S   F  M   D +SWNT++ G   +   +  L  F EM ++G Q +  +  S 
Sbjct: 459 SGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSV 518

Query: 181 VAASACLGELSYG 193
           + A +  G +  G
Sbjct: 519 LTACSVSGLVDEG 531


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 223/793 (28%), Positives = 370/793 (46%), Gaps = 78/793 (9%)

Query: 48  CVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD 107
           C +   + +G      M+  G R   TT +        +NCL Q        + A M+ D
Sbjct: 16  CAKQGALELGKQAHAHMILSGFR--PTTFV--------LNCLLQVYTNSRDFVSASMVFD 65

Query: 108 SSLC------NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLY 161
                     N  +N YAK  ++  +   F+ M   D VSWN+++SG L N    K +  
Sbjct: 66  RMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEV 125

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           F +MG +G + D  + +  +   +CL + S G  IH + +++G +    V   ++L+ MY
Sbjct: 126 FVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTD--VVAASALLDMY 183

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
           ++      + R F G+  K+ VSW+AII G   N     A     EMQ    V   ++  
Sbjct: 184 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ---KVNAGVSQS 240

Query: 282 V--TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           +  +++  CA    LR G  +H +A++     D ++  + +D Y+K +++  A++LF+  
Sbjct: 241 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKS 300

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
             +N   S+N+MI+G            LF  ++     F   +L  +  +C   + L  G
Sbjct: 301 ENLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 359

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             I+   +K   S +    NA + MY  C  L  AF +   +    D   WN +I A  Q
Sbjct: 360 LQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQ 418

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG   E +  F SM + +   PD  T  +V+ AC    L + G  +H   +KS M  ++ 
Sbjct: 419 NGKGYETLFLFVSMLRSR-IEPDEFTFGSVLKACTGGSLGY-GMEIHSSIVKSGMASNSS 476

Query: 508 VQNALITMYGRCRDIKSASTV----------------FESCYNCNL----CTWNCMISAF 547
           V  +LI MY +C  I+ A  +                 E  +N  L     +WN +IS +
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536

Query: 548 SQNKAEVRALELF-RHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
              +    A  LF R +E    P++ +  ++L  C  L     GKQIH  V     Q + 
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 596

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +ISS L+DMYS C               +    W++MI  Y +HGKG EAI+LF  M   
Sbjct: 597 YISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            I+P   + IS+L AC+H GL+D+GL+Y+  M  +Y + P+  H+  +VD+LG+SGK++ 
Sbjct: 657 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 716

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACS-HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           A E I+ +P +    +W  +L  C+ H  + ++ ++    L +L+P++   Y  LSN+Y 
Sbjct: 717 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 776

Query: 769 ALGRWKDAVEIGK 781
             G W+   ++ +
Sbjct: 777 DAGMWEKVSDLRR 789



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 171/651 (26%), Positives = 290/651 (44%), Gaps = 67/651 (10%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +DVV+WN+M++  ++N   +  +  F +M   G  FD  T  II+   + +     G  +
Sbjct: 101 RDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQI 160

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H + ++ G   D    +  ++MYAK      S   F G+   ++VSW+ I++GC+ NN  
Sbjct: 161 HGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 220

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAAS-----ACLGELSYGKVIHALGIKLGYEDSPY 210
              L +F+EM     Q  N  +S ++ AS     A L EL  G  +HA  +K  +     
Sbjct: 221 SLALKFFKEM-----QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 275

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V      + MY++C +++ A+  F      +  S+NA+I G++      +A  L H  +L
Sbjct: 276 VRTAT--LDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFH--RL 331

Query: 271 MRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           M S +  D  ++  +   CA    L EG  ++  AI+  L  D+ + N+ +D Y K  +L
Sbjct: 332 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQAL 391

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
           ++A  +F+ +    D VSWN++I+             LF  ML    +    T  ++L +
Sbjct: 392 AEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKA 450

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS- 436
           C    SL +G  IH   +K G ++N+    +L+ MY  CG +  A  +  R    ++ S 
Sbjct: 451 CTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSG 509

Query: 437 ------------------CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
                              WN +I         ++A   F  M  +   +PD  T   V+
Sbjct: 510 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM-EMGITPDKFTYATVL 568

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
             C NL  A  GK +H   +K  +  D  + + L+ MY +C D+  +  +FE     +  
Sbjct: 569 DTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFV 628

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TWN MI  ++ +     A++LF  +  E   PN ++ +SIL AC  +G++  G +     
Sbjct: 629 TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE----- 683

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            +    +  +     L  YSN         M+   G  GK   A+EL  EM
Sbjct: 684 -YFYMMKRDYGLDPQLPHYSN---------MVDILGKSGKVKRALELIREM 724



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 272/606 (44%), Gaps = 73/606 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +++LL  Y+    F  SL +F     K+ V+W+A+I  CV+N  + + L FF EM +  
Sbjct: 175 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 234

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                +    ++ +   ++ L+ G  +H  ++K+   AD  +    ++MYAKC ++  ++
Sbjct: 235 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 294

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      +  S+N +++G     +  K LL F  +  SG   D +SLS    A A + 
Sbjct: 295 ILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 354

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            LS G  I+ L IK     S  V V N+ I MY +C  +  A R F  M  +D VSWNAI
Sbjct: 355 GLSEGLQIYDLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 412

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     NGK  E   L   M L   +EPD  T  +++  C     L  G  +H   ++  
Sbjct: 413 IAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSVLKACTGG-SLGYGMEIHSSIVKSG 470

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLF-------NAIAPMNDL------------VSWN 349
           +  +  +  SL+D YSK   + +AE +        N    M +L            VSWN
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWN 530

Query: 350 SMISG------------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           S+ISG            LF  M+ +     +F+++T   +L +C +  S   GK IH   
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT---VLDTCANLASAGLGKQIHAQV 587

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K    ++    + L+ MY  CGDL  +  + ++ S   D   WN +I     +G  +EA
Sbjct: 588 IKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 646

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I+ F+ M   +N  P+ VT ++++ AC ++ L  +G     + +K   GLD ++ +    
Sbjct: 647 IQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYFYM-MKRDYGLDPQLPH---- 700

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                                    ++ M+    ++    RALEL R + FE +++   +
Sbjct: 701 -------------------------YSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 735

Query: 575 ILSACT 580
           +L  CT
Sbjct: 736 LLGVCT 741


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/681 (29%), Positives = 340/681 (49%), Gaps = 39/681 (5%)

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            C  S  H A T S N  ++         + L  +  M  +   +D  +  S + A + L
Sbjct: 15  RCVVSLPHPATTNSVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFL 74

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
              S G  +H   +  G     Y++  +SLI+ Y++ G  + A + F  M  ++VV W  
Sbjct: 75  NLFSLGLTLHQRILVSGLSLDAYIA--SSLINFYAKFGFADVARKVFDYMPERNVVPWTT 132

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II  ++  G+  EAF L  EM+  + ++P   TV++L+   ++   L   + +HG AI  
Sbjct: 133 IIGCYSRTGRVPEAFSLFDEMR-RQGIQPSSVTVLSLLFGVSE---LAHVQCLHGCAILY 188

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D+ + NS+++ Y K  ++  +  LF+ +    DLVSWNS+IS             L
Sbjct: 189 GFMSDINLSNSMLNVYGKCGNIEYSRKLFDYM-DHRDLVSWNSLISAYAQIGNICEVLLL 247

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            K M     +    T  ++L    S   L+ G+ +H   L+ GF  +     +L+ +Y+ 
Sbjct: 248 LKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLK 307

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G +  AF + +R S + D   W  +I    QNG   +A+  F+ M +     P + T+ 
Sbjct: 308 GGKIDIAFRMFER-SSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKF-GVKPSTATMA 365

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +VI+AC  L     G S+ G  L+  + LD   QN+L+TMY +C  +  +S VF+     
Sbjct: 366 SVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRR 425

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN M++ ++QN     AL LF  +  +   P+ I+IVS+L  C   G L  GK IH
Sbjct: 426 DLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIH 485

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
             V   G +    + ++L+DMY  C                   +WS++I  YGYHGKG 
Sbjct: 486 SFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGE 545

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
            A+  + +   SG++P     +S+LS+CSH+GLV++GL  Y +M +++ + P+ EHH C+
Sbjct: 546 AALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACV 605

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+L R+G+++EAY   K     P   V G +L AC  +G+ ++G  +A  +  L P + 
Sbjct: 606 VDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDA 665

Query: 758 GYYISLSNMYVALGRWKDAVE 778
           G ++ L++ Y ++ +W++  E
Sbjct: 666 GNFVQLAHCYASINKWEEVGE 686



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 256/540 (47%), Gaps = 28/540 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ++SL+  Y+   + + +  +F     ++VV W  +I        V      F EM  +GI
Sbjct: 99  ASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGI 158

Query: 70  RFDSTT---LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +  S T   LL  VS L  + CL      H  +I  G ++D +L N  +N+Y KCG++  
Sbjct: 159 QPSSVTVLSLLFGVSELAHVQCL------HGCAILYGFMSDINLSNSMLNVYGKCGNIEY 212

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           S   F  M   D VSWN+++S         + LL  + M   G +A   +  S ++ +A 
Sbjct: 213 SRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAAS 272

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            GEL  G+ +H   ++ G+    +V    SLI +Y + G I+ A R F   + KDVV W 
Sbjct: 273 RGELKLGRCLHGQILRAGFYLDAHVE--TSLIVVYLKGGKIDIAFRMFERSSDKDVVLWT 330

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G   NG  ++A  +  +M L   V+P  AT+ ++I+ CA       G S+ GY +R
Sbjct: 331 AMISGLVQNGSADKALAVFRQM-LKFGVKPSTATMASVITACAQLGSYNLGTSILGYILR 389

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           + L  D+   NSL+  Y+K   L ++ ++F+ +    DLVSWN+M++G            
Sbjct: 390 QELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMN-RRDLVSWNAMVTGYAQNGYVCEALF 448

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF EM          T++++L  C S   L  GK IH + ++ G     +   +L+ MY 
Sbjct: 449 LFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYC 508

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CGDL  A     ++  + D   W+ +IV    +G  + A++ F S   +    P+ V  
Sbjct: 509 KCGDLDTAQRCFNQMP-SHDLVSWSAIIVGYGYHGKGEAALR-FYSKFLESGMKPNHVIF 566

Query: 475 VNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++V+S+C +  L  +G +++    K   +  D      ++ +  R   ++ A  V++  +
Sbjct: 567 LSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKF 626



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 226/464 (48%), Gaps = 21/464 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE--NRCVVMGLH 59
           GF++ +  S S+L  Y      E S  LF    ++D+V+WN++I+A  +  N C V+ L 
Sbjct: 189 GFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLL- 247

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
               M  +G      T   ++S       LK GR +H   ++AG   D+ +    + +Y 
Sbjct: 248 -LKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYL 306

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G ++ +   F      D V W  ++SG + N   +K L  FR+M   G +    +++S
Sbjct: 307 KGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMAS 366

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A LG  + G  I  LG  L  E    V+  NSL++MY++CG ++ +   F  M  
Sbjct: 367 VITACAQLGSYNLGTSI--LGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNR 424

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D+VSWNA++ G+A NG   EA  L +EM+   +  PD  T+V+L+  CA +  L  G+ 
Sbjct: 425 RDLVSWNAMVTGYAQNGYVCEALFLFNEMR-SDNQTPDSITIVSLLQGCASTGQLHLGKW 483

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H + IR  L   +L+  SL+D Y K   L  A+  FN + P +DLVSW+++I G     
Sbjct: 484 IHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQM-PSHDLVSWSAIIVGYGYHG 542

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGV 406
                   + + L    + +    L++L SC+    +E G +I+    K  G + +    
Sbjct: 543 KGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHH 602

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
             ++ +    G +  A+++ ++   +       I++ AC  NG+
Sbjct: 603 ACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGN 646


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 187/603 (31%), Positives = 315/603 (52%), Gaps = 40/603 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM--QL 270
           + ++L   Y+ CG I  A + F  M    ++S+N +I  +  +G + +A ++   M  + 
Sbjct: 51  ILSTLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEG 110

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
           ++ V PD  T   +     +   +  G  +HG  +R   G D  + N+L+  Y     + 
Sbjct: 111 IKCV-PDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVE 169

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ +    D++SWN+MISG            +F  M+        +T++++LP C
Sbjct: 170 MARNVFDVMKN-RDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVC 228

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              + LE G+++H    +    +     NAL++MY+ CG +  A  +  R+    D   W
Sbjct: 229 GHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERR-DVITW 287

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I    ++G  + A++  + M Q +   P++VT+ +++SACG+     +GK LHG A+
Sbjct: 288 TCMINGYIEDGDVENALELCRLM-QFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAI 346

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +  +  D  ++ +LI+MY +C+ I     VF      +   W+ +I+   QN+    AL+
Sbjct: 347 RQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALD 406

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +   + EPN  ++ S+L A   L  LR    IH ++   GF  +   ++ L+ +YS
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYS 466

Query: 616 NC-------------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            C                   K    W ++IS YG HG G  A+++F EM  SG+ P + 
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  S L+ACSHSGLV+EGL  ++ MLE Y     + H+ CIVD+LGR+G+L EAY  I  
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P +P   +WGA+L+AC  H + ++G+  A  LF+LEPEN G Y+ L+N+Y ALGRWKD 
Sbjct: 587 IPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDM 646

Query: 777 VEI 779
            ++
Sbjct: 647 EKV 649



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 283/613 (46%), Gaps = 26/613 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L   Y+   +   +  LF E     ++++N +I   V +      ++ F  MV EGI+
Sbjct: 53  STLSVTYALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIK 112

Query: 71  --FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              D  T   +  A  ++  +  G V+H   +++    D  + N  + MY   G +  + 
Sbjct: 113 CVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMAR 172

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D +SWNT++SG   N Y    L+ F  M   G   D+ ++ S +     L 
Sbjct: 173 NVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLK 232

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  G+ +H L  +    D   + V N+L++MY +CG ++ A   F  M  +DV++W  +
Sbjct: 233 GLEMGRNVHKLVEEKRLGDK--IEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCM 290

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I+G+  +G  E A +L   MQ    V P+  T+ +L+S C D+L L +G+ +HG+AIR+ 
Sbjct: 291 INGYIEDGDVENALELCRLMQF-EGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQK 349

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +  D+++  SL+  Y+K   +     +F+  A  N    W+++I+G            LF
Sbjct: 350 VCSDIIIETSLISMYAKCKHIDLCFRVFSG-ASRNHTGPWSAIIAGCVQNELVRDALDLF 408

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K M     + + +TL ++LP+  +   L    +IHC+  K GF ++      L+H+Y  C
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468

Query: 417 GDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
           G L +A   F+ +Q    + D   W  +I     +G    A++ F  M  +   +P+ +T
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV-RSGVTPNEIT 527

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESC 532
             + ++AC +  L  EG +L    L+    L  +     ++ + GR   +  A  +  + 
Sbjct: 528 FTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587

Query: 533 -YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEP-NEISIVSILSACTQLGVLRHGK 589
            +      W  +++A  +    ++  +   +  E EP N  + V + +    LG  +  +
Sbjct: 588 PFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDME 647

Query: 590 QIHGHVFHLGFQE 602
           ++   + ++G ++
Sbjct: 648 KVRNMMENVGLRK 660



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 16/357 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +    +L+  Y      + +  +F     +DV+TW  MI   +E+  V   L     M  
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQF 312

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG+R ++ T+  +VSA      L  G+ +H  +I+  + +D  +    ++MYAKC  ++ 
Sbjct: 313 EGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDL 372

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               FSG     T  W+ I++GC+ N      L  F+ M     + +  +L+S + A A 
Sbjct: 373 CFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYAT 432

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM----TCKDV 242
           L +L     IH    K G+  S  +     L+ +YS+CG +E+A + F G+      KDV
Sbjct: 433 LADLRQTMNIHCYLTKTGFMSS--LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVH 301
           V W A+I G+ ++G    A  +   M+++RS V P+  T  + ++ C+ S L+ EG ++ 
Sbjct: 491 VLWGALISGYGMHGDGHNALQVF--MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548

Query: 302 GYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            + +     Y  L  ++    ++D   ++  L +A  L   I        W ++++ 
Sbjct: 549 SFMLEH---YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAA 602



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF----YETCNKDVVTWNAMITACVENRCVVMG 57
           GF++ L  +T L+  YS     ES+  +F     +  +KDVV W A+I+    +      
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVN 116
           L  F EMV  G+  +  T    ++A +    +++G  +    ++    +A S+     V+
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVD 569

Query: 117 MYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGCL-HNN 153
           +  + G L+ +    + +    T + W  +++ C+ H N
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHEN 608


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 177/557 (31%), Positives = 301/557 (54%), Gaps = 38/557 (6%)

Query: 255 NGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            G+ +EA  +L+ M L  + V  D+     L+  CA    L +GR VH   ++  +  + 
Sbjct: 74  QGRLKEALGILNTMILQGTRVYSDV--FRGLLQECARLRSLEQGREVHAAILKSGIQPNR 131

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLY 361
            + N+L+  Y+K  SL+ A  +F+ I   N +VSW +MI               ++ M  
Sbjct: 132 YLENTLLSMYAKCGSLTDARRVFDGIRDRN-IVSWTAMIEAFVAGNQNLEAYKCYETMKL 190

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              +    T +++L +  +PE L+ G+ +H    K G         +L+ MY  CGD+  
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  ++    +   W ++I    Q G    A++  + M QQ   +P+ +T  +++  C
Sbjct: 251 AQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKM-QQAEVAPNKITYTSILQGC 308

Query: 482 GNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
               LA E GK +H   ++S  G +  V NALITMY +C  +K A  +F    + ++ TW
Sbjct: 309 -TTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW 367

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             M++ ++Q      A++LFR ++    +P++++  S L++C+    L+ GK IH  + H
Sbjct: 368 TAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVH 427

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G+  + ++ SAL+ MY+ C               ++  AW++MI+    HG+  EA+E 
Sbjct: 428 AGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEY 487

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M   GI+P K +  S+LSAC+H GLV+EG +++ +M  +Y ++P  EH+ C VD+LG
Sbjct: 488 FEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 547

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G L+EA   I  +P QP P VWGA+LSAC  H D + G++ AE + KL+P++ G Y++
Sbjct: 548 RAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVA 607

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN+Y A GR++DA ++
Sbjct: 608 LSNIYAAAGRYEDAEKV 624



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 247/505 (48%), Gaps = 22/505 (4%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L     M+ +G R  S     ++    ++  L+QGR VH   +K+G+  +  L N  ++
Sbjct: 80  ALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLS 139

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYAKCG L  +   F G+   + VSW  ++   +  N   +    +  M  +G + D V+
Sbjct: 140 MYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVT 199

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + A      L  G+ +H    K G E  P V    SL+ MY++CGDI  A+  F  
Sbjct: 200 FVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TSLVGMYAKCGDISKAQVIFDK 257

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  K+VV+W  +I G+A  G+ + A +LL +MQ    V P+  T  +++  C   L L  
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQ-QAEVAPNKITYTSILQGCTTPLALEH 316

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ VH Y I+   G ++ ++N+L+  Y K   L +A  LF  + P  D+V+W +M++G  
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL-PHRDVVTWTAMVTGYA 375

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF+ M     +    T  + L SC+SP  L+ GKSIH   +  G+S +  
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVY 435

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +AL+ MY  CG +  A  +  ++S   +   W  +I  C Q+G  +EA++ F+ M ++
Sbjct: 436 LQSALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCAQHGRCREALEYFEQM-KK 493

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           Q   PD VT  +V+SAC ++ L  EG+  H  ++    G+   V++    + + GR   +
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 552

Query: 523 KSASTVFESC-YNCNLCTWNCMISA 546
           + A  V  +  +      W  ++SA
Sbjct: 553 EEAENVILTMPFQPGPSVWGALLSA 577



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 227/493 (46%), Gaps = 24/493 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ Y+       +  +F    ++++V+W AMI A V     +     +  M   G + 
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + +++A T    L+ G+ VH    KAG+  +  +    V MYAKCGD++ ++  F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   + V+W  +++G       +  L    +M  +    + ++ +S +        L 
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +H   I+ GY     + V N+LI+MY +CG ++ A + F  +  +DVV+W A++ G
Sbjct: 316 HGKKVHRYIIQSGYGRE--IWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A  G  +EA DL   MQ  + ++PD  T  + ++ C+    L+EG+S+H   +      
Sbjct: 374 YAQLGFHDEAIDLFRRMQ-QQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+ + ++L+  Y+K  S+  A L+FN ++  N +V+W +MI+G             F++M
Sbjct: 433 DVYLQSALVSMYAKCGSMDDARLVFNQMSERN-VVAWTAMITGCAQHGRCREALEYFEQM 491

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
                +    T  ++L +C     +E G K      L  G        +  + +    G 
Sbjct: 492 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGH 551

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VTL 474
           L  A +++  +      S W  ++ AC  +   +   +  +++ +     PD     V L
Sbjct: 552 LEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLK---LDPDDDGAYVAL 608

Query: 475 VNVISACGNLELA 487
            N+ +A G  E A
Sbjct: 609 SNIYAAAGRYEDA 621



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 165/349 (47%), Gaps = 12/349 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y+       +  +F +   K+VVTW  +I    +   V + L    +M +  + 
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+   T    L+ G+ VH   I++G   +  + N  + MY KCG L  +   
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKL 355

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D V+W  +++G     + ++ +  FR M   G + D ++ +SA+ + +    L
Sbjct: 356 FGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFL 415

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   +  GY    Y+   ++L+SMY++CG ++ A   F  M+ ++VV+W A+I 
Sbjct: 416 QEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMIT 473

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHGYAI 305
           G A +G+  EA +   +M+  + ++PD  T  +++S C    L+ EGR         Y I
Sbjct: 474 GCAQHGRCREALEYFEQMK-KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGI 532

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           + ++ +     +  +D   ++  L +AE +   +        W +++S 
Sbjct: 533 KPMVEH----YSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSA 577



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 44/239 (18%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
            ++L++ Y+     + +  +F +   ++VV W AMIT C ++      L +F +M ++GI
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGI 496

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           + D  T   ++SA T +  +++GR     + +  G+       + FV++  + G L  +E
Sbjct: 497 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 556

Query: 129 CTFSGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQ-ADNVSLSSAVAASAC 186
                M      S W  ++S C  ++  E+           GE+ A+NV           
Sbjct: 557 NVILTMPFQPGPSVWGALLSACRIHSDVER-----------GERAAENV----------- 594

Query: 187 LGELSYGKVIHALGIKLGYEDS-PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                         +KL  +D   YV+++N    +Y+  G  E AE+    M  +DVV 
Sbjct: 595 --------------LKLDPDDDGAYVALSN----IYAAAGRYEDAEKVRQVMEKRDVVK 635


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 223/777 (28%), Positives = 363/777 (46%), Gaps = 67/777 (8%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK 101
           N+ I A V+       L    +     +     T   ++     ++ L  GR +H   + 
Sbjct: 24  NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83

Query: 102 AGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH-----CADTVSWNTIMSGCLHNNYPE 156
            G+ +D  +    +NMY KCG L S+   F  M        D   WN ++ G     + E
Sbjct: 84  MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLGYEDSPYVSV 213
           + L  F  M                       ELS+   G+ IH   I+  +E  PY+  
Sbjct: 144 EGLAQFCRMQ----------------------ELSWYMAGRQIHGYIIRNMFEGDPYLET 181

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
             +LI MYS C     A   F  +  + ++V+WN +I GF  NG +E++ +L + +    
Sbjct: 182 --ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLEL-YSLAKNE 238

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           + +   A+     + C+   +L  GR VH   I+     D  +  SL+  Y+KS S+  A
Sbjct: 239 NCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA 298

Query: 333 ELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNS 380
           + +F+ +    ++   N+MIS            GL+ +M    +     T+ ++L  C+ 
Sbjct: 299 KKVFDQVLD-KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSV 357

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             S +FG+++H   +K    +N    +AL+ MY  CG    A S+   +    D   W  
Sbjct: 358 VGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER-DVVAWGS 416

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I    QN  F++A+  F++M +++    DS  + +VISA   LE    G  +HG A+K 
Sbjct: 417 MIAGFCQNRRFKDALDLFRAM-EKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKR 475

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
            +  D  V  +L+ MY +    +SA  VF S  N NL  WN MIS +S N     ++ L 
Sbjct: 476 GLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLL 535

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             +    F  + +SI ++L A + +  L  GK +H +   L    +  + +AL+DMY  C
Sbjct: 536 PQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKC 595

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          ++   W+SMI+ YG HG   EA+ LF EM  S   P + + ++L+
Sbjct: 596 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 655

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           ++CSHSG+V+EGL  +  M  EY V P  EH+  +VD+LGR+G+L +AY FI+ +PI   
Sbjct: 656 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 715

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             VW  +L AC  H + ++G+ VA+ L K+EP     Y+ L N+Y  +  W  A  +
Sbjct: 716 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANL 772



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 279/552 (50%), Gaps = 23/552 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           T+L+  YS+ S    + +LF +  N+ ++V WN MI   VEN      L  +     E  
Sbjct: 181 TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENC 240

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           +  S +     +A +    L  GR VHC  IK     D  +C   + MYAK G +  ++ 
Sbjct: 241 KLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKK 300

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   +    N ++S  + N      L  + +M       D+ ++SS ++  + +G 
Sbjct: 301 VFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGS 360

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             +G+ +HA  IK   + +  V++ ++L++MY +CG  E A+  F+ M  +DVV+W ++I
Sbjct: 361 YDFGRTVHAEVIKRSMQSN--VAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMI 418

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF  N +F++A DL   M+    V+ D   + ++IS       +  G  +HG+AI+R L
Sbjct: 419 AGFCQNRRFKDALDLFRAME-KEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGL 477

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
             D+ +  SL+D YSK      AE++F+++ P  +LV+WNSMIS     GL +  + L  
Sbjct: 478 ESDVFVACSLVDMYSKFGFAESAEMVFSSM-PNKNLVAWNSMISCYSWNGLPEMSINLLP 536

Query: 365 Q-------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q           ++  +L + +S  +L  GK++H +Q++L   ++    NAL+ MY+ CG
Sbjct: 537 QILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCG 596

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A  + + +   +  + WN +I     +G+ +EA++ FK M + + A PD VT + +
Sbjct: 597 CLKYAQLIFENMPRRNLVT-WNSMIAGYGSHGNCEEAVRLFKEMKRSETA-PDEVTFLAL 654

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YN 534
           I++C +  +  EG +L  L ++   G++ R+++  +++ + GR   +  A +       +
Sbjct: 655 ITSCSHSGMVEEGLNLFQL-MRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPID 713

Query: 535 CNLCTWNCMISA 546
            +   W C++ A
Sbjct: 714 ADRSVWLCLLFA 725



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 225/448 (50%), Gaps = 17/448 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLLT Y+     E +  +F +  +K+V   NAMI+A + N      L  + +M      
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 342

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS T+  ++S  + +     GR VH   IK  M ++ ++ +  + MY KCG    ++  
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 402

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D V+W ++++G   N   +  L  FR M   G +AD+  ++S ++A   L  +
Sbjct: 403 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 462

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G +IH   IK G E   +V+   SL+ MYS+ G  E+AE  F  M  K++V+WN++I 
Sbjct: 463 ELGHLIHGFAIKRGLESDVFVAC--SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            ++ NG  E + +LL ++ L      D  ++ T++   +    L +G+++H Y IR  + 
Sbjct: 521 CYSWNGLPEMSINLLPQI-LQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 579

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            DL + N+L+D Y K   L  A+L+F  + P  +LV+WNSMI+G            LFKE
Sbjct: 580 SDLQVENALIDMYVKCGCLKYAQLIFENM-PRRNLVTWNSMIAGYGSHGNCEEAVRLFKE 638

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
           M    +     T LA++ SC+    +E G ++    +++ G         +++ +    G
Sbjct: 639 MKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAG 698

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            L  A+S ++ +  ++D S W  ++ AC
Sbjct: 699 RLDDAYSFIRGMPIDADRSVWLCLLFAC 726



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 159/297 (53%), Gaps = 3/297 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   +++   ++LLT Y      E + ++FY    +DVV W +MI    +NR     L  
Sbjct: 374 RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 433

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M +EG++ DS  +  ++SA   +  ++ G ++H  +IK G+ +D  +    V+MY+K
Sbjct: 434 FRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSK 493

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G   S+E  FS M   + V+WN+++S    N  PE  +    ++   G   D+VS+++ 
Sbjct: 494 FGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTV 553

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + +  L  GK +HA  I+L       + V N+LI MY +CG ++ A+  F  M  +
Sbjct: 554 LVAVSSVAALLKGKTLHAYQIRLQIPSD--LQVENALIDMYVKCGCLKYAQLIFENMPRR 611

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           ++V+WN++I G+  +G  EEA  L  EM+   +  PD  T + LI+ C+ S ++ EG
Sbjct: 612 NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETA-PDEVTFLALITSCSHSGMVEEG 667


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 213/708 (30%), Positives = 354/708 (50%), Gaps = 42/708 (5%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           + L +K+G   D+ L +  VN +A  GD   +          DTVSWN+++SG      P
Sbjct: 43  YALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQP 102

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
                 F  +  SG   D  SLSS V      G L   +V H + +K+G  +   VS   
Sbjct: 103 GPVFDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGLLNGFVVS--- 156

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ-LMRSV 274
            L+  Y++ GD+++AE+ F      D V W A++ GF  NG+FE+  ++  EM+ L   +
Sbjct: 157 GLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGL 216

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKA 332
           E +  ++ +++   +D   +REG  V G +++   L G  + + N+LM+ YS+  S S A
Sbjct: 217 ELNEFSLTSVLGALSD---VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDA 273

Query: 333 ELLFNAIAPMNDLVSWNSMISG---------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
             +F+ +    D+VSW   I           LF+ +L    + +   L+ +L +   P+ 
Sbjct: 274 IKMFDEMTE-PDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKL 332

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L+ G+ I     K G+       NAL+ MY  CG++VAA  +   +    D+  WN +I 
Sbjct: 333 LKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEML-CGDSVSWNSLIA 391

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              +NG  ++A+K F  M +     P+  TL +++    N     +   +H   +K    
Sbjct: 392 GYAENGLMKQALKVFSQM-RDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFI 450

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR-- 561
           +D  + + LIT YG+C  I  +  V+      N+   N M +          AL+LF+  
Sbjct: 451 VDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTG 510

Query: 562 -HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
             L  E + I++  +L AC  L  L +G+ IH      G  +++F+ SA++D+Y  C   
Sbjct: 511 WRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTV 570

Query: 618 -----------KSN-AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                      K+N  AW++M+  Y  HG   E  ELF++M   GI+P + + + +L++C
Sbjct: 571 DEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSC 630

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
            H+GLV+E   Y ++MLE + V P  EH+ C++D+ GR G L++A   I  +PI P   +
Sbjct: 631 CHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQI 690

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           W  +LS C+ HG+  +G+  A+ L +L+PEN   Y+ LSN+Y + GRW
Sbjct: 691 WQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRW 738



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 193/749 (25%), Positives = 346/749 (46%), Gaps = 66/749 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF      S+ ++  ++    F  +     +T   D V+WN++I+     R        F
Sbjct: 50  GFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLF 109

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +   G+  D  +L  +V        L+Q  V H + +K G++ +  + +  ++ YAK 
Sbjct: 110 NGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGLL-NGFVVSGLLDGYAKL 165

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWS-GEQADNVSLSS 179
           GD++S+E  F   + AD+V W  ++ G + N   EK    F EM G   G + +  SL+S
Sbjct: 166 GDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTS 225

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   L ++  G+ +  L +K+G      + + N+L++MYS+CG    A + F  MT 
Sbjct: 226 VLGA---LSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTE 282

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            DVVSW   I G A +    EAF+L   + L  ++E +   ++ ++S   +  LL+ GR 
Sbjct: 283 PDVVSWTERI-GAAYDAI--EAFELFR-LVLSGNMEVNEYMLINVLSAMREPKLLKSGRQ 338

Query: 300 VHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           + G   +   GY L+  + N+L+  Y K   +  A  +F+ +    D VSWNS+I+    
Sbjct: 339 IQGLCQKA--GYLLVASVNNALIFMYGKCGEMVAARHIFDEML-CGDSVSWNSLIAGYAE 395

Query: 354 -GLFKEMLYLCSQ----------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
            GL K+ L + SQ          ++ +++L +  + N PE       IH + +KLGF  +
Sbjct: 396 NGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQ---AMQIHSYIVKLGFIVD 452

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
              ++ L+  Y  C  +  +  +   IS   +    N +       G   +A+K F++  
Sbjct: 453 DSMLSCLITAYGKCNMICESKRVYSDISQ-INVLHLNAMAATLVHAGCHADALKLFQT-G 510

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            + +   D +TL  V+ ACG L     G+++H +ALKS M  D  V++A+I +Y +C  +
Sbjct: 511 WRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTV 570

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSAC 579
             A+  F +    NL  WN M+  ++Q+       ELF     L  +P+EI+ + +L++C
Sbjct: 571 DEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSC 630

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
              G++               + ++++SS +L+++        ++ MI  +G  G   +A
Sbjct: 631 CHAGLVN--------------EAHTYLSS-MLELHGVVPCLEHYACMIDLFGRVGLLEDA 675

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
                +M    I P       LLS C+  G VD G      ++E   ++PE +    ++ 
Sbjct: 676 KRTIDQM---PIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIE---LQPENDSAYVLLS 729

Query: 700 ML----GRSGKLQEAYEFIKNLPIQPKPG 724
            L    GR   + +    +K   I  +PG
Sbjct: 730 NLYASAGRWNAVGKLRRVMKKKIICKEPG 758


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 221/717 (30%), Positives = 360/717 (50%), Gaps = 46/717 (6%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L I  G   +       +  YA       S   F  +H  D   WN+I+     N   
Sbjct: 60  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 119

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV---S 212
           ++   ++ +M  S    +  ++   V+  A L   ++G  IH L  KLG     +V   +
Sbjct: 120 QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGL----FVGNSA 175

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + +S I MYS+CG +E+A   F  +T KDVV+W A+I G+  N +       L EM  + 
Sbjct: 176 IGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIG 235

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              P+  T+ +    C D   L EG+ +HG A++       ++ ++++  YS+  S  +A
Sbjct: 236 GT-PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEA 294

Query: 333 ELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA--ILPSC------N 379
              F  +    DL+SW S+I+     GL  E L+L  +   S ++   I+ SC      N
Sbjct: 295 YRCFCKL-DQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGN 353

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S    E GK+ H   LK   + + I  NAL+ MY   G L  A  +      +S+   W+
Sbjct: 354 SDRIFE-GKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED--WS 410

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I+  +  G  ++ I   + M       PD  +LV+VIS+C  +     G+S+H  A+K
Sbjct: 411 TMILGYSNMGQKEKCISFLREMLLL-GREPDLNSLVSVISSCSQVGAINIGRSIHCYAIK 469

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           + +  +  V N+L+ MYG+   + +   +F      ++ +WN +IS++ Q+     A+ L
Sbjct: 470 NSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIIL 529

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  +  E   PN+++ + +LSAC  L  L  G++IH ++   GF+ N  I +AL+DMY+ 
Sbjct: 530 FDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAK 589

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +    W+ MIS YG HG    A+E+F  M  S I+P   + +SL
Sbjct: 590 CGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSL 649

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSAC+H+G V EG   ++ M ++Y + P  +H+  I+D+LGRSG L+ A   + ++PI P
Sbjct: 650 LSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITP 708

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
              VWG++LSAC  H + ++G ++A    + +P+N GYYI LS++Y  LGRW D VE
Sbjct: 709 DGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRW-DEVE 764



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 190/740 (25%), Positives = 349/740 (47%), Gaps = 50/740 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+  Y+       S  LF    +KD+  WN++I +   N        F+ +M     
Sbjct: 75  ATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSS 134

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNSSE 128
             +  T+ ++VS   ++     G  +H L+ K G+ + +S++ + F+ MY+KCG + S+ 
Sbjct: 135 LPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESAS 194

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             FS +   D V+W  ++ G + NN   + L    EM   G   +  ++ S   A   L 
Sbjct: 195 IMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLD 254

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK +H L +K G+    +  V ++++SMYS+CG  E A R F  +  KD++SW +I
Sbjct: 255 ALVEGKCLHGLALKNGF--LCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSI 312

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I   +  G   E   L  EMQ    + PD   +  ++    +S  + EG++ H   +++ 
Sbjct: 313 IAVHSKFGLMSECLHLFWEMQ-ASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQC 371

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
                +  N+L+  Y K   L  A  +F++    ++   W++MI G              
Sbjct: 372 CALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSE--DWSTMILGYSNMGQKEKCISFL 429

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +EML L  +   ++L++++ SC+   ++  G+SIHC+ +K     N    N+LM MY   
Sbjct: 430 REMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKS 489

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G + A + +  R +   D   WN +I +  Q+G   EAI  F  M +++   P+ VT + 
Sbjct: 490 GHVTATWRIFHR-TLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK-VYPNKVTCII 547

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+SAC +L    EG+ +H    ++    +  ++ ALI MY +C +++++  +F S    +
Sbjct: 548 VLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERD 607

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHG 593
           +  WN MIS +  +     A+E+F+ +E    +PN  + +S+LSAC   G +  G+ +  
Sbjct: 608 VILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFD 667

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +   G +                 S   ++S+I   G  G   EA E    + +  I P
Sbjct: 668 RMQKYGIE----------------PSLKHYASIIDLLGRSG-SLEAAEAL--VLSMPITP 708

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDM---LGRSGKLQE 709
             +   SLLSAC      + G++     +E     P+ + +++ + D+   LGR  ++++
Sbjct: 709 DGTVWGSLLSACKIHNEFEVGVRLARYAIES---DPKNDGYYIILSDLYSCLGRWDEVEK 765

Query: 710 AYEFIKNLPIQPKPGVWGAM 729
             + +K   ++ + G W A+
Sbjct: 766 VRDMMKKRGVEKRAG-WSAL 784



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 286/593 (48%), Gaps = 29/593 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+ +    +S +  YS   + ES+  +F E   KDVVTW A+I   V+N     GL    
Sbjct: 170 FVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLF 229

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM   G   +  T+     A   ++ L +G+ +H L++K G +    + +  ++MY++CG
Sbjct: 230 EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCG 289

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP--EKCLLYFREMGWSGEQADNVSLSSA 180
               +   F  +   D +SW +I++  +H+ +    +CL  F EM  S    D + +S  
Sbjct: 290 SPEEAYRCFCKLDQKDLISWTSIIA--VHSKFGLMSECLHLFWEMQASEIIPDEIVISCM 347

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGMTC 239
           +        +  GK  HA  +K   +      +T N+L+SMY + G +  A + F     
Sbjct: 348 LMGFGNSDRIFEGKAFHARILK---QCCALSGITHNALLSMYCKFGHLGTANKIFHSFH- 403

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K    W+ +I G++  G+ E+    L EM L+   EPD+ ++V++IS C+    +  GRS
Sbjct: 404 KSSEDWSTMILGYSNMGQKEKCISFLREMLLL-GREPDLNSLVSVISSCSQVGAINIGRS 462

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SG 354
           +H YAI+  +  ++ + NSLMD Y KS  ++    +F+      D++SWN++I     SG
Sbjct: 463 IHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTL-QRDVISWNTLISSYKQSG 521

Query: 355 LFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
           +  E + L  +        +  T + +L +C    SL+ G+ IH +  + GF +N     
Sbjct: 522 ILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRT 581

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CG+L  +  L    +   D   WN++I     +GH + A++ F+ M ++ N 
Sbjct: 582 ALIDMYAKCGELETSRKLFNS-TEERDVILWNVMISNYGMHGHVESAMEIFQLM-EESNI 639

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-S 526
            P++ T ++++SAC +     EG+ L     K  +    +   ++I + GR   +++A +
Sbjct: 640 KPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEA 699

Query: 527 TVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRH-LEFEPNEISIVSILS 577
            V       +   W  ++SA    N+ EV  + L R+ +E +P       ILS
Sbjct: 700 LVLSMPITPDGTVWGSLLSACKIHNEFEV-GVRLARYAIESDPKNDGYYIILS 751



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 211/467 (45%), Gaps = 17/467 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL      +++L+ YS     E +   F +   KD+++W ++I    +   +   LH F
Sbjct: 270 GFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLF 329

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    I  D   +  ++      + + +G+  H   +K          N  ++MY K 
Sbjct: 330 WEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKF 389

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F   H   +  W+T++ G  +    EKC+ + REM   G + D  SL S +
Sbjct: 390 GHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVI 448

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           ++ + +G ++ G+ IH   IK    ++  VSV NSL+ MY + G + A  R F     +D
Sbjct: 449 SSCSQVGAINIGRSIHCYAIKNSIIEN--VSVANSLMDMYGKSGHVTATWRIFHRTLQRD 506

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I  +  +G   EA  L  +M +   V P+  T + ++S CA    L EG  +H
Sbjct: 507 VISWNTLISSYKQSGILAEAIILFDKM-VKEKVYPNKVTCIIVLSACAHLASLDEGEKIH 565

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y        ++ +  +L+D Y+K   L  +  LFN+     D++ WN MIS        
Sbjct: 566 QYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEE-RDVILWNVMISNYGMHGHV 624

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F+ M     + +  T L++L +CN    +  G+ +     K G   +     ++
Sbjct: 625 ESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASI 684

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           + +    G L AA +L+  +    D + W  ++ AC  +  F+  ++
Sbjct: 685 IDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVR 731


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 203/630 (32%), Positives = 321/630 (50%), Gaps = 46/630 (7%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK  HA  +  G     ++S  N+L++MYS+CG + +A + F     +D+V+WNAI+  +
Sbjct: 96  GKCTHARIVVSGSAGDHFLS--NNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAY 153

Query: 253 A--LNGKFEEAFDLLHEMQLMRSV--EPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           A  ++     A + LH  +L+R+        T+  ++ LC +S  L     VHGYAI+  
Sbjct: 154 AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 213

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLC 363
           L +D+ +  +L++ YSK   +  A LLF+ +    D+V WN M+ G     L KE   L 
Sbjct: 214 LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQLGLEKEAFQLF 272

Query: 364 SQFSFSTLLA-------ILPSC--NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           S+F  S L         IL  C     + LE GK +H   +K G  ++    N+L++MY 
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD---- 470
             G    A  +   + H  D   WN +I +C Q+   +E++  F  +  +    PD    
Sbjct: 333 KMGCAYFAREVFNDMKH-LDLISWNSMISSCAQSSLEEESVNLFIDLLHE-GLKPDHFTL 390

Query: 471 -SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
            S+TL     ACG L L  +GK +H  A+K+    D  V + ++ MY +C D+ +A  VF
Sbjct: 391 ASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 450

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
                 +   W  MIS    N  E +AL ++   R     P+E +  +++ A + +  L 
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALE 510

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            G+Q+H +V  L    + F+ ++L+DMY+ C               ++ A W++M+    
Sbjct: 511 QGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLA 570

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG   EA+ LF  M + GI P + S I +LSACSH+GL  E  +Y ++M  +Y + PE 
Sbjct: 571 QHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEI 630

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD LGR+G +QEA + I+ +P +    +  A+L AC   GD + GK+VA  LF 
Sbjct: 631 EHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFA 690

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           LEP +   Y+ LSN+Y A  RW D  +  K
Sbjct: 691 LEPFDSAAYVLLSNIYAAANRWDDVTDARK 720



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 268/558 (48%), Gaps = 53/558 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV-----ENRCVVMGLHFFGEM 64
           S +LLT YS      S+  +F  T  +D+VTWNA++ A        +     GLH F  +
Sbjct: 115 SNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLL 174

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
                     TL  ++       CL     VH  +IK G+  D  +    VN+Y+KCG +
Sbjct: 175 RASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRM 234

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F  M   D V WN ++ G +     ++    F E   SG + D  S+   +  +
Sbjct: 235 RDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQ--LILN 292

Query: 185 ACL----GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            CL     +L  GK +H + +K G +    VSV NSL++MYS+ G    A   F  M   
Sbjct: 293 GCLWAGTDDLELGKQVHGIAVKSGLDSD--VSVANSLVNMYSKMGCAYFAREVFNDMKHL 350

Query: 241 DVVSWNAIIDGFALNGKFEEA----FDLLHEMQLMRSVEPD-----IATVVTLISLCADS 291
           D++SWN++I   A +   EE+     DLLHE      ++PD       T+ T    C   
Sbjct: 351 DLISWNSMISSCAQSSLEEESVNLFIDLLHE-----GLKPDHFTLASITLATAAKACGCL 405

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           +LL +G+ +H +AI+     DL + + ++D Y K   +  A ++FN I+  +D V+W SM
Sbjct: 406 VLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD-VAWTSM 464

Query: 352 ISG---------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           ISG                 ++   +  +++F+TL+    SC +  +LE G+ +H   +K
Sbjct: 465 ISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA-SSCVT--ALEQGRQLHANVIK 521

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           L   ++     +L+ MY  CG++  A+ L ++++   + + WN ++V   Q+G+ +EA+ 
Sbjct: 522 LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN-VRNIALWNAMLVGLAQHGNAEEAVN 580

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQN--ALI 513
            FKSM +     PD V+ + ++SAC +  L  E  + LH  ++ +  G++  +++   L+
Sbjct: 581 LFKSM-KSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH--SMPNDYGIEPEIEHYSCLV 637

Query: 514 TMYGRCRDIKSASTVFES 531
              GR   ++ A  V E+
Sbjct: 638 DALGRAGLVQEADKVIET 655



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 163/301 (54%), Gaps = 8/301 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  + SL+  YS +     +  +F +  + D+++WN+MI++C ++      ++ F
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 375

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNC-----LKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +++ EG++ D  TL  I  A     C     L QG+ +H  +IKAG  +D  + +  ++
Sbjct: 376 IDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 435

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCGD+ ++   F+ +   D V+W +++SGC+ N   ++ L  +  M  S    D  +
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            ++ + AS+C+  L  G+ +HA  IKL     P+V    SL+ MY++CG+IE A R F  
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT--SLVDMYAKCGNIEDAYRLFKK 553

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +++  WNA++ G A +G  EEA +L   M+    +EPD  + + ++S C+ + L  E
Sbjct: 554 MNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMK-SHGIEPDRVSFIGILSACSHAGLTSE 612

Query: 297 G 297
            
Sbjct: 613 A 613



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 183/404 (45%), Gaps = 38/404 (9%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +  S  +L  GK  H   +  G + +    N L+ MY  CG L +A  +    +   
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFD-TTPER 141

Query: 434 DTSCWNIVIVAC-----TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           D   WN ++ A      + +G+ QE +  F+ + +    S   +TL  V+  C N    +
Sbjct: 142 DLVTWNAILGAYAASVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLW 200

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
             + +HG A+K  +  D  V  AL+ +Y +C  ++ A  +F+     ++  WN M+  + 
Sbjct: 201 AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 260

Query: 549 QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQEN 603
           Q   E  A +LF         P+E S+  IL+ C   G   L  GKQ+HG     G   +
Sbjct: 261 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSD 320

Query: 604 SFISSALLDMYSN--CKSNA-------------AWSSMISAYGYHGKGWEAIELFHEMCN 648
             ++++L++MYS   C   A             +W+SMIS+        E++ LF ++ +
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380

Query: 649 SGIRPTKSSV--ISLLSACSHSG---LVDEGLQYYNNMLEEYDVRPETEHHV--CIVDML 701
            G++P   ++  I+L +A    G   L+D+G Q + + ++      +++ HV   I+DM 
Sbjct: 381 EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK---AGFDSDLHVNSGILDMY 437

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + G +  A   + N    P    W +M+S C  +G+     ++
Sbjct: 438 IKCGDMVNA-GIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480


>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/689 (27%), Positives = 324/689 (47%), Gaps = 80/689 (11%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+   N  +  Y+  GD++++   F GM   D VSWN ++SG       ++ +  F EM 
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G   D  + +  + + + L ELS G  +HAL +K G E    V   ++L+ MY +C  
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEID--VRTGSALVDMYGKCRS 199

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTL 284
           ++ A   F+GM  ++ VSW + I G   N ++    +L  EMQ   +   +P  A+    
Sbjct: 200 LDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASA--- 256

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
              CA    L  GR +H +AI+     D ++  +++D Y+K+NSL+ A   F  + P + 
Sbjct: 257 FRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL-PNHT 315

Query: 345 LVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           + + N+M+ GLF  M+    +F   +L  +  +C   +    G+ +HC           +
Sbjct: 316 VETSNAMMVGLF--MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHC-----------L 362

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            + +++ +Y  C  L+ A+ + Q +    D+  WN +I A  QNGH+ + I  F  M + 
Sbjct: 363 AIKSVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYDDTILHFNEMLR- 420

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
                                                   D  V + ++ MY +C  I  
Sbjct: 421 ---------------------------------------FDAFVASTVVDMYCKCGIIDE 441

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQ 581
           A  + +      + +WN ++S FS NK    A + F     +  +P+  +  ++L  C  
Sbjct: 442 AQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCAN 501

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  +  GKQIHG +      ++ +ISS L+DMY+ C               +   +W++M
Sbjct: 502 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 561

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I  Y  HG G EA+ +F  M    + P  ++ +++L ACSH GL D+G +Y++ M   Y 
Sbjct: 562 ICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYK 621

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P+ EH  C+VD+LGRS   QEA +FI ++P Q    +W  +LS C    D ++ +  A
Sbjct: 622 LEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAA 681

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKD 775
             +  L+P++   YI LSN+Y   G+W D
Sbjct: 682 SNVLLLDPDDSSVYILLSNVYAESGKWAD 710



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 262/580 (45%), Gaps = 61/580 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++LTAYS+     +++ALF    + DVV+WNA+++   +       +  F EM   G+  
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D TT  +++ + + +  L  G  VH L++K G+  D    +  V+MY KC  L+ + C F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + VSW + ++GC+ N    + L  F EM   G      S +SA  + A +  L+
Sbjct: 208 YGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  IK  +     V    +++ +Y++   +  A RAF+G+    V + NA++ G
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             +               +  S+  D+ ++  + S CA++     G+ VH  AI+     
Sbjct: 326 LFM---------------IRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK----- 365

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
                 S++D Y K  +L +A L+F  +    D VSWN++I+ L +   Y  +   F+ +
Sbjct: 366 ------SVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAIIAALEQNGHYDDTILHFNEM 418

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           L                             +    + ++ MY  CG +  A  L  RI  
Sbjct: 419 LRF---------------------------DAFVASTVVDMYCKCGIIDEAQKLHDRIGG 451

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
               S WN ++   + N   + A K F  M       PD  T   V+  C NL     GK
Sbjct: 452 QQVVS-WNAILSGFSLNKESEAAQKFFSEML-DMGLKPDHFTFATVLDTCANLATIELGK 509

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +HG  +K  M  D  + + L+ MY +C D+  +  VFE     +  +WN MI  ++ + 
Sbjct: 510 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHG 569

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
             V AL +F  ++ E   PN  + V++L AC+ +G+   G
Sbjct: 570 LGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 609



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 189/435 (43%), Gaps = 69/435 (15%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    + T ++L+  Y      + +L  FY    ++ V+W + I  CV+N   V GL  F
Sbjct: 179 GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELF 238

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+     +      +   M+CL  GR +H  +IK    +D  +    V++YAK 
Sbjct: 239 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKA 298

Query: 122 GDLNSSECTFSGM--HCA-------------------DTVSWNTIMSGCLHNN--YPEK- 157
             L  +   F G+  H                     D VS + + S C      +P + 
Sbjct: 299 NSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQ 358

Query: 158 --CL-------------------LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
             CL                   L F+ M    +Q D+VS ++ +AA    G   Y   I
Sbjct: 359 VHCLAIKSVLDLYGKCKALMEAYLIFQGM----KQKDSVSWNAIIAALEQNGH--YDDTI 412

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
                 L ++      V ++++ MY +CG I+ A++    +  + VVSWNAI+ GF+LN 
Sbjct: 413 LHFNEMLRFD----AFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 468

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           + E A     EM  M  ++PD  T  T++  CA+   +  G+ +HG  I++ +  D  + 
Sbjct: 469 ESEAAQKFFSEMLDM-GLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS 527

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
           ++L+D Y+K   +  + L+F  +    D VSWN+MI G            +F+ M     
Sbjct: 528 STLVDMYAKCGDMPDSLLVFEKVEK-RDFVSWNAMICGYALHGLGVEALRMFERMQKENV 586

Query: 365 QFSFSTLLAILPSCN 379
             + +T +A+L +C+
Sbjct: 587 VPNHATFVAVLRACS 601



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 99/260 (38%), Gaps = 50/260 (19%)

Query: 508 VQNALITM-------------------------------YGRCRDIKSASTVFESCYNCN 536
           V N L+ M                               Y    DI +A  +F+   + +
Sbjct: 54  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +WN ++S + Q      +++LF  +      P+  +   +L +C+ L  L  G Q+H 
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWE 638
                G + +    SAL+DMY  C+S                 +W S I+    + +   
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVR 233

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
            +ELF EM   G+  ++ S  S   +C+    ++ G Q + + ++      +      IV
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIV 292

Query: 699 DMLGRSGKLQEAYEFIKNLP 718
           D+  ++  L +A      LP
Sbjct: 293 DVYAKANSLTDARRAFFGLP 312



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 89/218 (40%), Gaps = 56/218 (25%)

Query: 567 PNEISIVSILSACTQLG--VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           P  ++   +  +C Q G   L  G+  H  +   GF   +F+S+ LL MY+ C       
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACAR 72

Query: 618 --------KSNAAWSSMISAYGYHGK-----------------GW--------------E 638
                   +   +W++M++AY + G                   W              E
Sbjct: 73  RVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQE 132

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHV 695
           +++LF EM   G+ P +++   LL +CS    +  G+Q +   ++   E DVR  +    
Sbjct: 133 SVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS---- 188

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            +VDM G+   L +A  F   +P +     WG+ ++ C
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMP-ERNWVSWGSAIAGC 225


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 202/625 (32%), Positives = 317/625 (50%), Gaps = 38/625 (6%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  GK IHA  ++ G   S Y+  TNSL+++Y++CG I  A+  F  +T KDVVSWN +
Sbjct: 25  DLQKGKAIHAQLLRTGSFSSVYL--TNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCL 82

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I+G++  G    +F ++   Q MR+    P+  T   + +  + S     G   H  AI+
Sbjct: 83  INGYSQKGTVGYSF-VMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIK 141

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
               YD+ + +SL++ Y K   +  A  +F+ I P  + VSW ++ISG   E +   +  
Sbjct: 142 TSNFYDVFVGSSLINMYCKIGCMLDARKVFDTI-PERNTVSWATIISGYAMERMAFEAWE 200

Query: 367 SFSTL------------LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
            F  +             ++L +   P+ + +GK IHC  LK G  +     NAL+ MY 
Sbjct: 201 LFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYG 260

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A    + +S + D   W+ +I    Q G   EA+  F +M    N  P   T 
Sbjct: 261 KCGCLDDALKTFE-LSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN-KPSEFTF 318

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V VI+AC ++    EGK +HG +LK+          AL+ MY +C  +  A   F+    
Sbjct: 319 VGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKE 378

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            ++  W  MIS ++QN     AL L+  ++ E   P+E+++ S+L AC+ L  L  GKQI
Sbjct: 379 PDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQI 438

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           H      GF     I SAL  MY+ C               +    W++MIS    +G+G
Sbjct: 439 HAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEG 498

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +A+ELF E+ +   +P   + +++LSACSH GLV+ G  Y+  ML+E+ + P  EH+ C
Sbjct: 499 LKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYAC 558

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+L R+GKL E  EFI++  I     +W  +L AC ++ + ++G    E L +L  + 
Sbjct: 559 MVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQE 618

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              YI LS++Y ALGR  D   + +
Sbjct: 619 SSAYILLSSIYTALGRSDDVERVRR 643



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 255/531 (48%), Gaps = 39/531 (7%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T+   L++G+ +H   ++ G  +   L N  VN+YAKCG +  ++  F  +   D VSWN
Sbjct: 21  TRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWN 80

Query: 144 TIMSGCLHNNYPEK-------CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
                CL N Y +K        +  F+ M       +  + S    A++   E   G   
Sbjct: 81  -----CLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 197 HALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           HAL IK   + D   V V +SLI+MY + G +  A + F  +  ++ VSW  II G+A+ 
Sbjct: 136 HALAIKTSNFYD---VFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 256 GKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
               EA++L     LMR  E   D     +++S      L+  G+ +H  A++  L    
Sbjct: 193 RMAFEAWELF---XLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + N+L+  Y K   L  A   F      +D ++W++MI+G            LF  M  
Sbjct: 250 SVGNALVTMYGKCGCLDDALKTFELSGDKDD-ITWSAMITGYAQAGDSHEALNLFYNMHL 308

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             ++ S  T + ++ +C+   +LE GK IH + LK G+      + AL+ MY  CG LV 
Sbjct: 309 NGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVD 368

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A      +    D   W  +I    QNG  + A+  +  M Q +   P  +T+ +V+ AC
Sbjct: 369 ARKGFDYLK-EPDIVLWTSMISGYAQNGENETALTLYCRM-QMERIMPHELTMASVLRAC 426

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +L    +GK +H   +K    L+  + +AL TMY +C  ++  + VF    + ++ TWN
Sbjct: 427 SSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWN 486

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK 589
            MIS  SQN   ++ALELF   RH   +P+ ++ V++LSAC+ +G++  GK
Sbjct: 487 AMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 537



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 160/554 (28%), Positives = 254/554 (45%), Gaps = 24/554 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVEE 67
           + SL+  Y+       +  +F    NKDVV+WN +I    +   V     +  F  M  E
Sbjct: 48  TNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAE 107

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
               +  T   + +A +       G   H L+IK     D  + +  +NMY K G +  +
Sbjct: 108 NTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDA 167

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   +TVSW TI+SG        +    F  M       D    +S ++A    
Sbjct: 168 RKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVP 227

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             + YGK IH L +K G       SV N+L++MY +CG ++ A + F     KD ++W+A
Sbjct: 228 DLVHYGKQIHCLALKNGL--LSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSA 285

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+A  G   EA +L + M L    +P   T V +I+ C+D   L EG+ +HGY+++ 
Sbjct: 286 MITGYAQAGDSHEALNLFYNMHL-NGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKA 344

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------ML 360
                +  M +L+D Y+K  SL  A   F+ +    D+V W SMISG  +         L
Sbjct: 345 GYECQIYFMTALVDMYAKCGSLVDARKGFDYLKE-PDIVLWTSMISGYAQNGENETALTL 403

Query: 361 YLCSQFSFS-----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           Y   Q         T+ ++L +C+S  +LE GK IH   +K GFS      +AL  MY  
Sbjct: 404 YCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAK 463

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L     + +R+  + D   WN +I   +QNG   +A++ F+ + +     PD VT V
Sbjct: 464 CGSLEDGNLVFRRMP-SRDIMTWNAMISGLSQNGEGLKALELFEEL-RHGTTKPDYVTFV 521

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC- 532
           NV+SAC ++ L   GK    + L    G+  RV++   ++ +  R   +       ES  
Sbjct: 522 NVLSACSHMGLVERGKVYFRMMLDEF-GIVPRVEHYACMVDILSRAGKLHETKEFIESAT 580

Query: 533 YNCNLCTWNCMISA 546
            +  +C W  ++ A
Sbjct: 581 IDHGMCLWRILLGA 594



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 242/515 (46%), Gaps = 46/515 (8%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           + P   + V L+  C     L++G+++H   +R      + + NSL++ Y+K  S+ KA+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 334 LLFNAIAPMNDLVSWNSMISG--------------LFKEML---YLCSQFSFSTLLAILP 376
           L+F +I    D+VSWN +I+G              LF+ M     L +  +FS +     
Sbjct: 66  LVFESITN-KDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           S  SPE+   G   H   +K     +    ++L++MY   G ++ A  +   I    +T 
Sbjct: 125 S--SPETFG-GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER-NTV 180

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I          EA + F  M +++ A  D     +V+SA    +L   GK +H L
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEGAH-DKFIYTSVLSALTVPDLVHYGKQIHCL 239

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           ALK+ +     V NAL+TMYG+C  +  A   FE   + +  TW+ MI+ ++Q      A
Sbjct: 240 ALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEA 299

Query: 557 LELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L LF ++     +P+E + V +++AC+ +G L  GKQIHG+    G++   +  +AL+DM
Sbjct: 300 LNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDM 359

Query: 614 YSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C S                  W+SMIS Y  +G+   A+ L+  M    I P + ++
Sbjct: 360 YAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTM 419

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
            S+L ACS    +++G Q +   + +Y    E      +  M  + G L++     + +P
Sbjct: 420 ASVLRACSSLAALEQGKQIHAQTI-KYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            +     W AM+S  S +G+   G +  EL  +L 
Sbjct: 479 SRDIM-TWNAMISGLSQNGE---GLKALELFEELR 509



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 210/455 (46%), Gaps = 17/455 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+  Y  +     +  +F     ++ V+W  +I+     R        F  M  E   
Sbjct: 152 SSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGA 211

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D      ++SALT  + +  G+ +HCL++K G+++ +S+ N  V MY KCG L+ +  T
Sbjct: 212 HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKT 271

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D ++W+ +++G        + L  F  M  +G +    +    + A + +G L
Sbjct: 272 FELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGAL 331

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   +K GYE   Y     +L+ MY++CG +  A + F  +   D+V W ++I 
Sbjct: 332 EEGKQIHGYSLKAGYECQIY--FMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMIS 389

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A NG+ E A  L   MQ+ R + P   T+ +++  C+    L +G+ +H   I+    
Sbjct: 390 GYAQNGENETALTLYCRMQMER-IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 448

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + ++L   Y+K  SL    L+F  + P  D+++WN+MISG            LF+E
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRM-PSRDIMTWNAMISGLSQNGEGLKALELFEE 507

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCG 417
           + +  ++  + T + +L +C+    +E GK      L + G          ++ +    G
Sbjct: 508 LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAG 567

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            L      ++  + +     W I++ AC    +++
Sbjct: 568 KLHETKEFIESATIDHGMCLWRILLGACRNYRNYE 602



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 149/297 (50%), Gaps = 3/297 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+      +L+T Y      + +L  F  + +KD +TW+AMIT   +       L+ F
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G +    T + +++A + +  L++G+ +H  S+KAG           V+MYAKC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC 363

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   D V W +++SG   N   E  L  +  M         ++++S +
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVL 423

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IHA  IK G+  S  V + ++L +MY++CG +E     F  M  +D
Sbjct: 424 RACSSLAALEQGKQIHAQTIKYGF--SLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           +++WNA+I G + NG+  +A +L  E++   + +PD  T V ++S C+   L+  G+
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELR-HGTTKPDYVTFVNVLSACSHMGLVERGK 537



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +P  ++L T Y+     E    +F    ++D++TWNAMI+   +N   +  L  F
Sbjct: 446 GFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELF 505

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAK 120
            E+     + D  T + ++SA + M  +++G+V   + +   G++         V++ ++
Sbjct: 506 EELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSR 565

Query: 121 CGDLNSSE 128
            G L+ ++
Sbjct: 566 AGKLHETK 573


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 191/641 (29%), Positives = 329/641 (51%), Gaps = 37/641 (5%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D V+L SA+        L  GK+IH      G++ +  + ++ SLI  Y  C D  +AE 
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSN--IVLSKSLIGFYFSCHDYASAEL 59

Query: 233 AFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            F    C  DV  WNA++  +  N +F EA  L  ++     V PD  T   ++  C   
Sbjct: 60  VFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGL 119

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             +  GR +H + ++  L +D+ + +SLM+ Y+K +    A  LF+   P  D+  WN++
Sbjct: 120 GRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEF-PQRDVGCWNAV 178

Query: 352 ISGLFKE------------MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           IS  FK+            M  L  + +  T   ++ SC    +LE GK +H   ++   
Sbjct: 179 ISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRI 238

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +   ++AL+ MY  CG L  A  + ++I   +  + WN +I   +  G  +  I+   
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAIT-WNAMITGYSLKGDSRSCIELLM 297

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  +    P  +TL ++I A         GK +HG  L++ + +D  +  +LI  Y +C
Sbjct: 298 RMNDE-GTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKC 356

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
             + SA T+F +     + +WN MIS        ++AL ++ +++    +P+ ++  S L
Sbjct: 357 GYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTL 416

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           SAC+QL  L  G+++H  + +   + N  +  ALLDMY+ C               +   
Sbjct: 417 SACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLV 476

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W+SMI AYG HG+  EA+ LF EM    +R    + +++LSACSH+GLVDEG  Y+N M
Sbjct: 477 SWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEM 536

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTK 740
           + +YD++P  EH+ C++D+LGR+G+L EAYE + ++   +   G+   + SAC  H +  
Sbjct: 537 VVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFV 596

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +G Q+ ++L +++P++   YI LSNMY ++ +W +  ++ +
Sbjct: 597 LGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRR 637



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 241/503 (47%), Gaps = 20/503 (3%)

Query: 2   GFLAHLPTSTSLLTAY-SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           GF +++  S SL+  Y S   Y  + L      C  DV  WNA+++A   N   V  L  
Sbjct: 33  GFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQL 92

Query: 61  FGEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F ++     +R D  T  +++ A   +  +  GR +H   +K G+I D  + +  +NMYA
Sbjct: 93  FDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYA 152

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC     +   F      D   WN ++S    +   E  L  F +M   G + ++V+ + 
Sbjct: 153 KCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTV 212

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            V++   L  L  GK +H   I+       +  V ++L+ MY +CG +E A+  F  +  
Sbjct: 213 VVSSCTRLLNLERGKEVHRELIERRILLDAF--VLSALVDMYGKCGCLEMAKEVFEKIPR 270

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+ ++WNA+I G++L G      +LL  M      +P + T+ ++I   + S+ LR G+ 
Sbjct: 271 KNAITWNAMITGYSLKGDSRSCIELLMRMN-DEGTKPTLMTLTSIIYASSRSVQLRHGKF 329

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY +R  +  D+ +  SL+DFY K   +S AE +F  I+  N++VSWN MISG     
Sbjct: 330 IHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISK-NEVVSWNVMISGHVMVG 388

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  ++  M     +    T  + L +C+   +L+ G+ +H   +      N I + 
Sbjct: 389 NHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMG 448

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CGD+  A  L  ++    D   W  +I A   +G   EA++ F  M Q+ N 
Sbjct: 449 ALLDMYAKCGDVDEARKLFHQLP-KRDLVSWTSMIFAYGSHGQASEALRLFDEM-QKLNV 506

Query: 468 SPDSVTLVNVISACGNLELAFEG 490
             DSVT + V+SAC +  L  EG
Sbjct: 507 RADSVTFLAVLSACSHAGLVDEG 529



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 174/674 (25%), Positives = 302/674 (44%), Gaps = 47/674 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TLL  +   T    LKQG+++H      G  ++  L    +  Y  C D  S+E  F
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 132 SGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSSAVAASACLGE 189
               C   VS WN ++S   +N    + L  F ++   S  + D  +    + A   LG 
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + YG+ IH   +K G     +V   +SL++MY++C     A + F     +DV  WNA+I
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVG--SSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  +GK E A     +M+ +   EP+  T   ++S C   L L  G+ VH   I R +
Sbjct: 180 SCYFKDGKAEMALKTFDKMKEL-GFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRI 238

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  ++++L+D Y K   L  A+ +F  I P  + ++WN+MI+G            L  
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKI-PRKNAITWNAMITGYSLKGDSRSCIELLM 297

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M    ++ +  TL +I+ + +    L  GK IH + L+     +     +L+  Y  CG
Sbjct: 298 RMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCG 357

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            + +A ++ + IS N   S WN++I      G+  +A+  + +M ++ +  PD++T  + 
Sbjct: 358 YVSSAETIFRTISKNEVVS-WNVMISGHVMVGNHIQALHIYDNM-KEHHVKPDALTFSST 415

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC  L    +G+ LH   +   +  +  V  AL+ MY +C D+  A  +F      +L
Sbjct: 416 LSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDL 475

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  MI A+  +     AL LF   + L    + ++ +++LSAC+  G++  G      
Sbjct: 476 VSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEG------ 529

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
             ++ F E       ++  Y        +S +I   G  G+  EA E+     +   R  
Sbjct: 530 --YMYFNE-------MVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQR--SKETRSD 578

Query: 655 KSSVISLLSAC-SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + +L SAC  H+  V  G+Q    ++E     P T  ++ + +M     K  E  + 
Sbjct: 579 IGLLSTLFSACLLHNNFV-LGIQIGKMLIEVDPDDPST--YILLSNMYASVNKWDEVRKV 635

Query: 714 ---IKNLPIQPKPG 724
              +K L ++  PG
Sbjct: 636 RRKMKELGLKKSPG 649



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 240/500 (48%), Gaps = 26/500 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   +SL+  Y+    F  ++ LF E   +DV  WNA+I+   ++    M L  F
Sbjct: 136 GLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E G   +S T  ++VS+ T++  L++G+ VH   I+  ++ D+ + +  V+MY KC
Sbjct: 196 DKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKC 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F  +   + ++WN +++G         C+     M   G +   ++L+S +
Sbjct: 256 GCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSII 315

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AS+   +L +GK IH   ++   +   ++ V  SLI  Y +CG + +AE  F  ++  +
Sbjct: 316 YASSRSVQLRHGKFIHGYILRNRIDVDIFIDV--SLIDFYFKCGYVSSAETIFRTISKNE 373

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G  + G   +A  +   M+    V+PD  T  + +S C+    L +GR +H
Sbjct: 374 VVSWNVMISGHVMVGNHIQALHIYDNMK-EHHVKPDALTFSSTLSACSQLAALDKGRELH 432

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I   L  + ++M +L+D Y+K   + +A  LF+ + P  DLVSW SMI         
Sbjct: 433 YCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQL-PKRDLVSWTSMIFAYGSHGQA 491

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTI 404
                LF EM  L  +    T LA+L +C+    ++     F + +  + +K G  + + 
Sbjct: 492 SEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYS- 550

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
               L+ +    G L  A+ +LQR     SD    + +  AC  + +F   I+  K + +
Sbjct: 551 ---CLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIE 607

Query: 464 QQNASPDSVTLVNVISACGN 483
                P +  L++ + A  N
Sbjct: 608 VDPDDPSTYILLSNMYASVN 627


>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
 gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
          Length = 644

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 204/644 (31%), Positives = 329/644 (51%), Gaps = 74/644 (11%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TCKDVVSW 245
           +L+ G+ IHA   +      P V   N LI MY +CG +  A + F+ +   +  ++V+W
Sbjct: 10  DLARGRQIHASIARSSAPQDPVVG--NWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAW 67

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I  +A NG+ + A  L  +MQL     PD  T+VT+   C +   L +G+ +H Y  
Sbjct: 68  TALIAAYARNGQTKLAIRLFQQMQL-EGNSPDRITLVTIFEACGNPENLEDGKKIHAYLS 126

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
                 D+++ +SL+  Y K  SLS+A L+F ++   N  V+WNS++             
Sbjct: 127 ---CNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNT-VAWNSLMGAFVQHDRVEAAM 182

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L+ EML      S  T L +L + +S ESL  GK +H   ++ G  ++ +   AL++MY
Sbjct: 183 ELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMY 242

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +V A  +  R+  + D   W+ VI A      ++E+++ F+ M  + N  P++VT
Sbjct: 243 GKCGSVVEAVEVFDRMPRH-DVILWSAVISAHVNCAEYEESLRLFRKMQLEGN-RPNNVT 300

Query: 474 LVNVISACGN--------------LELAFEGKSLHGLALKSLMGL--------------- 504
           LV+V+SAC                +E  +EG  + G A+ S+ G                
Sbjct: 301 LVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVP 360

Query: 505 ---DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                 + NALI+MYGRC     A  +F+S    +  TWN M+S   Q +    +++LFR
Sbjct: 361 RRNGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFR 420

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +  E   P++++I+++L+ C  L  L+ GK I   + H     N  I +A+L+MY+ C 
Sbjct: 421 QMLQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCG 480

Query: 619 SN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S                 +W+++I AYG + +G  A ++F  M   G  P   +  ++LS
Sbjct: 481 SRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILS 540

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
            CSH GL+ E ++++  M E+Y V  ET H+ CIVD+LGR G++ EA E  + +P    P
Sbjct: 541 VCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDP 600

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            VW  +LSAC  HG+T+ GK+ AE L +L+PE    Y+ LS +Y
Sbjct: 601 IVWTTLLSACQVHGETQRGKRAAERLVELDPEVTSAYVVLSTIY 644



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/644 (23%), Positives = 289/644 (44%), Gaps = 75/644 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM---HCADTVSWNTI 145
           L +GR +H    ++    D  + N  + MY KCG L  +   F  +      + V+W  +
Sbjct: 11  LARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTAL 70

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           ++    N   +  +  F++M   G   D ++L +   A      L  GK IHA       
Sbjct: 71  IAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAY-----L 125

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
             +  V + +SLI+MY +CG +  A   F  M   + V+WN+++  F  + + E A +L 
Sbjct: 126 SCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELY 185

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM L     P   T +T+++  +    LR G+ VH   +      D+++  +L++ Y K
Sbjct: 186 WEM-LQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGK 244

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             S+ +A  +F+ + P +D++ W+++IS             LF++M    ++ +  TL++
Sbjct: 245 CGSVVEAVEVFDRM-PRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVS 303

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C  P++LE GK IH   ++ G+  + I  NA++ MY  CG L  A+ +  R+   +
Sbjct: 304 VLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRN 363

Query: 434 -------------------------------DTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                                          D   WN ++    Q  H +++I+ F+ M 
Sbjct: 364 GVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQML 423

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            Q+   PD VT++ V++ C +L    EGK++      + +  +  + NA++ MY +C   
Sbjct: 424 -QEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSR 482

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC 579
             A  +F      +  +WN +I A+        A ++F+ ++ E   P+ ++  +ILS C
Sbjct: 483 DEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVC 542

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
           +  G+L  G+ +    +    +E+ ++ +              +  ++   G  G+  EA
Sbjct: 543 SHGGLL--GEAVK---WFRWMREDYYVEA----------ETGHYGCIVDLLGRLGRVPEA 587

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            E+  +M  +G  P   +  +LLSAC   G    G +    ++E
Sbjct: 588 EEVAEKM-PAGTDPIVWT--TLLSACQVHGETQRGKRAAERLVE 628



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 273/605 (45%), Gaps = 71/605 (11%)

Query: 29  LFY---ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ 85
           +FY   ET   ++V W A+I A   N    + +  F +M  EG   D  TL+ I  A   
Sbjct: 52  VFYQLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGN 111

Query: 86  MNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
              L+ G+ +H  LS  + ++  SSL    + MY KCG L+ +   F  M   +TV+WN+
Sbjct: 112 PENLEDGKKIHAYLSCNSDVVLGSSL----ITMYGKCGSLSEACLMFQSMEEWNTVAWNS 167

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +M   + ++  E  +  + EM   G      +  + +AA + L  L +GK++H   ++ G
Sbjct: 168 LMGAFVQHDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAG 227

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           +ED   V V  +L++MY +CG +  A   F  M   DV+ W+A+I       ++EE+  L
Sbjct: 228 HEDD--VVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRL 285

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH------GYAIRRLLGYDLLMM-- 316
             +MQL     P+  T+V+++S C     L  G+ +H      GY    ++G  ++ M  
Sbjct: 286 FRKMQL-EGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYG 344

Query: 317 ------------------------NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                                   N+L+  Y +  S  KA  LF+++A   D V+WN+M+
Sbjct: 345 KCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAE-RDAVTWNTMM 403

Query: 353 S------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           S             LF++ML   +     T+L +L  C S  +L+ GK+I  W      S
Sbjct: 404 SVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLS 463

Query: 401 NNTIGVNALMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            N +  NA+++MY  CG    A   FS++Q      D   WN +I A       + A + 
Sbjct: 464 ANQMIGNAILNMYAKCGSRDEARRIFSVMQ----GRDAVSWNALIGAYGSYSRGRYAFQI 519

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMY 516
           F++M Q + ++PD+VT   ++S C +  L  E  K    +     +  +T     ++ + 
Sbjct: 520 FQAM-QLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLL 578

Query: 517 GRCRDIKSASTVFESC-YNCNLCTWNCMISA---FSQNKAEVRALELFRHLEFEPNEISI 572
           GR   +  A  V E      +   W  ++SA     + +   RA E  R +E +P   S 
Sbjct: 579 GRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAE--RLVELDPEVTSA 636

Query: 573 VSILS 577
             +LS
Sbjct: 637 YVVLS 641



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 191/382 (50%), Gaps = 33/382 (8%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L  C+  + L  G+ IH    +     + +  N L+ MY+ CG L+ A  +  ++   S
Sbjct: 1   LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60

Query: 434 --DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +   W  +I A  +NG  + AI+ F+ M  + N SPD +TLV +  ACGN E   +GK
Sbjct: 61  VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGN-SPDRITLVTIFEACGNPENLEDGK 119

Query: 492 SLHG-LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
            +H  L+  S    D  + ++LITMYG+C  +  A  +F+S    N   WN ++ AF Q+
Sbjct: 120 KIHAYLSCNS----DVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQH 175

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                A+EL+  +    F P+  + +++L+A + L  LRHGK +H  +   G +++  + 
Sbjct: 176 DRVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQ 235

Query: 608 SALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL++MY  C S                  WS++ISA+    +  E++ LF +M   G R
Sbjct: 236 TALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNR 295

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQE 709
           P   +++S+LSAC     ++ G   +  ++E   E D+         IV M G+ G L++
Sbjct: 296 PNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGN----AIVSMYGKCGSLED 351

Query: 710 AYEFIKNLPIQPKPGVWGAMLS 731
           A++    +P +    +  A++S
Sbjct: 352 AWDVFHRVPRRNGVPIGNALIS 373



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 244/552 (44%), Gaps = 83/552 (15%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+  C+ S  L  GR +H    R     D ++ N L+  Y K  SL  A  +F  +   +
Sbjct: 1   LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60

Query: 344 --DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
             +LV+W ++I+             LF++M    +     TL+ I  +C +PE+LE GK 
Sbjct: 61  VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKK 120

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           IH +   L  +++ +  ++L+ MY  CG L  A  + Q +    +T  WN ++ A  Q+ 
Sbjct: 121 IHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSM-EEWNTVAWNSLMGAFVQHD 176

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             + A++ +  M  Q    P   T + V++A  +LE    GK +H   +++    D  VQ
Sbjct: 177 RVEAAMELYWEML-QCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQ 235

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--- 566
            AL+ MYG+C  +  A  VF+     ++  W+ +ISA         +L LFR ++ E   
Sbjct: 236 TALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNR 295

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAW-- 623
           PN +++VS+LSAC     L  GK IH  V   G++ +  + +A++ MY  C S   AW  
Sbjct: 296 PNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDV 355

Query: 624 -------------SSMISAYGYHGK-------------------------------GWEA 639
                        +++IS YG  G                                G ++
Sbjct: 356 FHRVPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDS 415

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---C 696
           I+LF +M   G  P K +++++L+ C+    + EG      +    D  P + + +    
Sbjct: 416 IQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEG----KAICAWLDHTPLSANQMIGNA 471

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLE-- 753
           I++M  + G   EA      +  Q +  V W A++ A   +   +   Q+ + + +LE  
Sbjct: 472 ILNMYAKCGSRDEARRIFSVM--QGRDAVSWNALIGAYGSYSRGRYAFQIFQAM-QLEGS 528

Query: 754 -PENVGYYISLS 764
            P+ V +   LS
Sbjct: 529 TPDAVTFTTILS 540



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/499 (22%), Positives = 222/499 (44%), Gaps = 51/499 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+T Y        +  +F      + V WN+++ A V++  V   +  + EM++ G  
Sbjct: 135 SSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELYWEMLQCGFL 194

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
               T L +++A++ +  L+ G++VH   ++AG   D  +    VNMY KCG +  +   
Sbjct: 195 PSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAVEV 254

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D + W+ ++S  ++    E+ L  FR+M   G + +NV+L S ++A      L
Sbjct: 255 FDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQAL 314

Query: 191 SYGKVIHALGIKLGYED---------SPY---------------------VSVTNSLISM 220
             GK IH   ++ GYE          S Y                     V + N+LISM
Sbjct: 315 ETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISM 374

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y +CG    A   F  M  +D V+WN ++          ++  L  +M L     PD  T
Sbjct: 375 YGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQM-LQEGTPPDKVT 433

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           ++T++++CA    L+EG+++  +     L  + ++ N++++ Y+K  S  +A  +F+ + 
Sbjct: 434 ILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQ 493

Query: 341 PMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF-------------G 387
              D VSWN++I        Y   +++F    A+    ++P+++ F             G
Sbjct: 494 G-RDAVSWNALIGAYGS---YSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLG 549

Query: 388 KSIHC--WQLKLGFSNNTIG-VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           +++    W  +  +     G    ++ +    G +  A  + +++   +D   W  ++ A
Sbjct: 550 EAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSA 609

Query: 445 CTQNGHFQEAIKTFKSMTQ 463
           C  +G  Q   +  + + +
Sbjct: 610 CQVHGETQRGKRAAERLVE 628



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 15/286 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +P   +L++ Y     F  +  LF     +D VTWN M++   +       +  F +M++
Sbjct: 365 VPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQ 424

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG   D  T+L +++    +  L++G+ +        + A+  + N  +NMYAKCG  + 
Sbjct: 425 EGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDE 484

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   FS M   D VSWN ++      +        F+ M   G   D V+ ++ +  S C
Sbjct: 485 ARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTIL--SVC 542

Query: 187 LGELSYGKVI-HALGIKLGYEDSPYVSVTNS----LISMYSQCGDIEAAERAFWGMTC-K 240
               S+G ++  A+       +  YV         ++ +  + G +  AE     M    
Sbjct: 543 ----SHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGT 598

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           D + W  ++    ++G+ +         + +  ++P++ +   ++S
Sbjct: 599 DPIVWTTLLSACQVHGETQRG---KRAAERLVELDPEVTSAYVVLS 641


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 193/606 (31%), Positives = 313/606 (51%), Gaps = 43/606 (7%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P    + SL+   +  G ++ A  A   +   D    N +I GFA +          +  
Sbjct: 39  PKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFA-DAGLPAGALAAYRG 97

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L     PD  T   ++  CA    L EGR+ HG  I+  L +D+   NSL+ FY+K   
Sbjct: 98  MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML-YLCSQFSFSTLLAIL 375
           +  AE +F+ + P+ D+V+WN M+ G             F+EM   L  Q     ++A L
Sbjct: 158 VEDAERVFDGM-PVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAAL 216

Query: 376 PSCNSPESLEF----GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            +C     LEF    GK IH + ++ G   +     +L+ MY  CG++  A S+   +  
Sbjct: 217 AAC----CLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
            +  + WN +I     N    EA   F  M + +    + VT +N+++AC   E +  G+
Sbjct: 273 RTVVT-WNCMIGGYALNERPDEAFDCFMQM-RAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           S+HG  ++        ++ AL+ MYG+   ++S+  +F    N  L +WN MI+A+   +
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 552 AEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               A+ LF  L      P+  ++ +++ A   LG LRH +QIH ++  LG+ EN+ I +
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           A+L MY+                 K   +W++MI  Y  HG+G  A+E+F EM  +G++P
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
            +S+ +S+L+ACS SGLVDEG  ++N ML+EY + P+ EH+ C+ D+LGR G L+E  +F
Sbjct: 511 NESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQF 570

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I+++PI P   VWG++L+A  +  D  + +  AE +F+LE +N G YI LS+MY   GRW
Sbjct: 571 IESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRW 630

Query: 774 KDAVEI 779
           +D   +
Sbjct: 631 EDVERV 636



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 170/589 (28%), Positives = 289/589 (49%), Gaps = 28/589 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +S SL+ + +     + ++         D    N MI    +       L  +  M+E+G
Sbjct: 43  SSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDG 102

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            R D  T  ++V    ++  L +GR  H + IK G+  D   CN  V  YAK G +  +E
Sbjct: 103 ARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACL 187
             F GM   D V+WN ++ G + N      L  F+EM  + E Q D+V + +A+A  AC 
Sbjct: 163 RVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA--ACC 220

Query: 188 GELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            E S   GK IH   I+ G E    + V  SL+ MY +CG++  A   F  M  + VV+W
Sbjct: 221 LEFSSMQGKEIHGYVIRHGLEQD--IKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I G+ALN + +EAFD   +M+    ++ ++ T + L++ CA +     GRSVHGY +
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMR-AEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVV 337

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKEM----- 359
           RR     +++  +L++ Y K   +  +E +F  IA    LVSWN+MI+  ++KEM     
Sbjct: 338 RRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAI 396

Query: 360 ---LYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
              L L +Q     + T+  ++P+     SL   + IH + + LG++ NT+ +NA++HMY
Sbjct: 397 TLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMY 456

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              GD+VA+  +  ++  + D   WN +I+    +G  + A++ F  M +     P+  T
Sbjct: 457 ARSGDVVASREIFDKMV-SKDVISWNTMIMGYAIHGQGKTALEMFDEM-KYNGLQPNEST 514

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            V+V++AC    L  EG     L L+   G+  ++++   +  + GR  D++      ES
Sbjct: 515 FVSVLTACSVSGLVDEGWMHFNLMLQEY-GMIPQIEHYGCMTDLLGREGDLREVLQFIES 573

Query: 532 C-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
              +     W  +++A  +QN  ++      R  + E +      +LS+
Sbjct: 574 MPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSS 622



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/566 (26%), Positives = 256/566 (45%), Gaps = 38/566 (6%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +    + +   D    N ++ G      P   L  +R M   G + D  +    V
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A LG L  G+  H + IKLG E   Y    NSL++ Y++ G +E AER F GM  +D
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYT--CNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+WN ++DG+  NG    A     EM     V+ D   ++  ++ C       +G+ +H
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           GY IR  L  D+ +  SL+D Y K   ++ A  +F A  P+  +V+WN MI G       
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVF-ATMPLRTVVTWNCMIGGYALNERP 291

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F +M     Q    T + +L +C   ES  +G+S+H + ++  F  + +   AL
Sbjct: 292 DEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETAL 351

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY   G + ++  +  +I++ +  S WN +I A      + EAI  F  +  Q    P
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVS-WNNMIAAYMYKEMYTEAITLFLELLNQP-LYP 409

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T+  V+ A   L      + +H   +      +T + NA++ MY R  D+ ++  +F
Sbjct: 410 DYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIF 469

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
           +   + ++ +WN MI  ++ +     ALE+F  +++   +PNE + VS+L+AC+  G++ 
Sbjct: 470 DKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVD 529

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G  +H   F+L  QE   I                +  M    G  G   E ++    M
Sbjct: 530 EG-WMH---FNLMLQEYGMIPQI-----------EHYGCMTDLLGREGDLREVLQFIESM 574

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVD 672
               I PT     SLL+A  +   +D
Sbjct: 575 ---PIDPTSRVWGSLLTASRNQNDID 597



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   TSLL  Y        + ++F     + VVTWN MI     N         F
Sbjct: 239 GLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG++ +  T + +++A  Q      GR VH   ++   +    L    + MY K 
Sbjct: 299 MQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKV 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + SSE  F  +     VSWN +++  ++     + +  F E+       D  ++S+ V
Sbjct: 359 GKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVV 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG L + + IH+  I LGY ++    + N+++ MY++ GD+ A+   F  M  KD
Sbjct: 419 PAFVLLGSLRHCRQIHSYIIGLGYAENTL--IMNAVLHMYARSGDVVASREIFDKMVSKD 476

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN +I G+A++G+ + A ++  EM+    ++P+ +T V++++ C+ S L+ EG
Sbjct: 477 VISWNTMIMGYAIHGQGKTALEMFDEMKY-NGLQPNESTFVSVLTACSVSGLVDEG 531



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 94/193 (48%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R FL H+   T+LL  Y  V   ESS  +F +  NK +V+WN MI A +        +  
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITL 398

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++ + +  D  T+  +V A   +  L+  R +H   I  G   ++ + N  ++MYA+
Sbjct: 399 FLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYAR 458

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD+ +S   F  M   D +SWNT++ G   +   +  L  F EM ++G Q +  +  S 
Sbjct: 459 SGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSV 518

Query: 181 VAASACLGELSYG 193
           + A +  G +  G
Sbjct: 519 LTACSVSGLVDEG 531


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 195/668 (29%), Positives = 335/668 (50%), Gaps = 61/668 (9%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           + VSWNT+++    +  P + L  ++ M   G    N +L+S ++A   +  L  G+  H
Sbjct: 5   NAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCH 64

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            L +K+G +   +V   N L+ MY++CG +  A R F GM   + VS+ A++ G A  G 
Sbjct: 65  GLAVKVGLDGHQFVE--NGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 122

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS--------LLLREGRSVHGYAIRRLL 309
            ++A  L   M     +  D   V +++  CA +          ++  +S+H   +R+  
Sbjct: 123 VDDALRLFARMS-RTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGF 181

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
           G D  + NSL+D Y+K   + +A  +F +++ ++ +VSWN +I+G  +   Y        
Sbjct: 182 GSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVS-IVSWNILITGYGQLGCYE------- 233

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
                     + E LEF +       + GF  N +  + ++   I   D+ +A ++  +I
Sbjct: 234 ---------RAMEVLEFMQ-------ESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 277

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLEL 486
              S T+ WN ++    Q    QE I  F+ M Q QN  PD  TL  ++S+C   GN EL
Sbjct: 278 PKPSVTT-WNTLLSGYGQEELHQETIDLFRRM-QHQNVQPDRTTLAVILSSCSRLGNFEL 335

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK +H  +++ L+  D  V + LI +Y +C  +  A  +F      ++  WN MIS 
Sbjct: 336 ---GKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISG 392

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            + +     A +  + +      P E S  S+++ C +L  +  G+Q+H  V   G+ +N
Sbjct: 393 LAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQN 452

Query: 604 SFISSALLDMYS------------NC---KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            ++  +L+DMY+            NC   K+  AW+ MI  Y  +G G +A+ELF  M  
Sbjct: 453 VYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLT 512

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +  +P   + I++L+ CSHSGLVDE + ++N+M   Y + P  EH+ C++D L R+ +  
Sbjct: 513 TKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFA 572

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           E    I  +P +  P +W  +L+AC  H + ++G+  A+ LF+L+P+N   Y+ LSN+Y 
Sbjct: 573 EVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYA 632

Query: 769 ALGRWKDA 776
            LGR  DA
Sbjct: 633 TLGRHGDA 640



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 259/574 (45%), Gaps = 64/574 (11%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +++ V+WN +I A   +      L  +  M++EG+   + TL  ++SA   +  L  GR 
Sbjct: 3   DRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRR 62

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
            H L++K G+     + N  + MY KCG +  +   F GM   + VS+  +M G      
Sbjct: 63  CHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGA 122

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVA--ASACLGELSYGKV------IHALGIKLGYE 206
            +  L  F  M  +G + D V++SS +   A AC G+ +  +       IHAL ++ G+ 
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 182

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              +V   NSL+ +Y++   ++ A + F  ++   +VSWN +I G+   G +E A ++L 
Sbjct: 183 SDQHVG--NSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            MQ     EP+  T   +++ C                                    K+
Sbjct: 241 FMQ-ESGFEPNEVTYSNMLASCI-----------------------------------KA 264

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A  +F+ I P   + +WN+++SG            LF+ M +   Q   +TL  I
Sbjct: 265 RDVPSARAMFDKI-PKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVI 323

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L SC+   + E GK +H   ++L   N+    + L+ +Y  CG +  A  +   ++   D
Sbjct: 324 LSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER-D 382

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             CWN +I     +   +EA    K M ++    P   +  ++I+ C  L    +G+ +H
Sbjct: 383 VVCWNSMISGLAIHSLSEEAFDFLKQM-RENGMFPTESSYASMINLCARLSSIPQGRQMH 441

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              LK     +  V  +LI MY +  ++  A   F      NL  WN MI  ++QN    
Sbjct: 442 AQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGE 501

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           +A+ELF ++   + +P+ ++ +++L+ C+  G++
Sbjct: 502 KAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLV 535



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 186/385 (48%), Gaps = 12/385 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T +++L +        S+ A+F +     V TWN +++   +       +  F
Sbjct: 246 GFEPNEVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLF 305

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + ++ D TTL +I+S+ +++   + G+ VH  S++  +  D  + +  +++Y+KC
Sbjct: 306 RRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKC 365

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   D V WN+++SG   ++  E+   + ++M  +G      S +S +
Sbjct: 366 GQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMI 425

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              A L  +  G+ +HA  +K GY+ + YV    SLI MY++ G+++ A   F  M  K+
Sbjct: 426 NLCARLSSIPQGRQMHAQVLKDGYDQNVYVGC--SLIDMYAKSGNMDDARLFFNCMIVKN 483

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           +V+WN +I G+A NG  E+A +L  E  L    +PD  T + +++ C+ S L+ E  +  
Sbjct: 484 LVAWNEMIHGYAQNGFGEKAVELF-EYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFF 542

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                 Y I  L+ +       L+D  +++   ++ E +   +   +D + W  +++   
Sbjct: 543 NSMESNYGITPLVEH----YTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACV 598

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSP 381
                   +FS   L  + P   SP
Sbjct: 599 VHHNAELGEFSAKHLFRLDPKNPSP 623



 Score = 42.7 bits (99), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 34/57 (59%)

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           ++  +W+++I+A    G   EA+E++  M   G+ PT  ++ S+LSAC     +D+G
Sbjct: 4   RNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 221/717 (30%), Positives = 360/717 (50%), Gaps = 46/717 (6%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L I  G   +       +  YA       S   F  +H  D   WN+I+     N   
Sbjct: 30  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV---S 212
           ++   ++ +M  S    +  ++   V+  A L   ++G  IH L  KLG     +V   +
Sbjct: 90  QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGL----FVGNSA 145

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + +S I MYS+CG +E+A   F  +T KDVV+W A+I G+  N +       L EM  + 
Sbjct: 146 IGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIG 205

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              P+  T+ +    C D   L EG+ +HG A++       ++ ++++  YS+  S  +A
Sbjct: 206 GT-PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEA 264

Query: 333 ELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA--ILPSC------N 379
              F  +    DL+SW S+I+     GL  E L+L  +   S ++   I+ SC      N
Sbjct: 265 YRCFCKL-DQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGN 323

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S    E GK+ H   LK   + + I  NAL+ MY   G L  A  +      +S+   W+
Sbjct: 324 SDRIFE-GKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED--WS 380

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I+  +  G  ++ I   + M       PD  +LV+VIS+C  +     G+S+H  A+K
Sbjct: 381 TMILGYSNMGQKEKCISFLREMLLL-GREPDLNSLVSVISSCSQVGAINIGRSIHCYAIK 439

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           + +  +  V N+L+ MYG+   + +   +F      ++ +WN +IS++ Q+     A+ L
Sbjct: 440 NSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIIL 499

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  +  E   PN+++ + +LSAC  L  L  G++IH ++   GF+ N  I +AL+DMY+ 
Sbjct: 500 FDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAK 559

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +    W+ MIS YG HG    A+E+F  M  S I+P   + +SL
Sbjct: 560 CGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSL 619

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSAC+H+G V EG   ++ M ++Y + P  +H+  I+D+LGRSG L+ A   + ++PI P
Sbjct: 620 LSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITP 678

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
              VWG++LSAC  H + ++G ++A    + +P+N GYYI LS++Y  LGRW D VE
Sbjct: 679 DGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRW-DEVE 734



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 185/740 (25%), Positives = 349/740 (47%), Gaps = 50/740 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+  Y+       S  LF    +KD+  WN++I +   N        F+ +M     
Sbjct: 45  ATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSS 104

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNSSE 128
             +  T+ ++VS   ++     G  +H L+ K G+ + +S++ + F+ MY+KCG + S+ 
Sbjct: 105 LPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESAS 164

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             FS +   D V+W  ++ G + NN   + L    EM   G   +  ++ S   A   L 
Sbjct: 165 IMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLD 224

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK +H L +K G+    +  V ++++SMYS+CG  E A R F  +  KD++SW +I
Sbjct: 225 ALVEGKCLHGLALKNGF--LCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSI 282

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I   +  G   E   L  EMQ    + PD   +  ++    +S  + EG++ H   +++ 
Sbjct: 283 IAVHSKFGLMSECLHLFWEMQ-ASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQC 341

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
                +  N+L+  Y K   L  A  +F++    ++   W++MI G              
Sbjct: 342 CALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSE--DWSTMILGYSNMGQKEKCISFL 399

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +EML L  +   ++L++++ SC+   ++  G+SIHC+ +K     N    N+LM MY   
Sbjct: 400 REMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKS 459

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G + A + +  R +   D   WN +I +  Q+G   EAI  F  M +++   P+ VT + 
Sbjct: 460 GHVTATWRIFHR-TLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK-VYPNKVTCII 517

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+SAC +L    EG+ +H    ++    +  ++ ALI MY +C +++++  +F S    +
Sbjct: 518 VLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERD 577

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHG 593
           +  WN MIS +  +     A+E+F+ +E    +PN  + +S+LSAC   G +  G+ +  
Sbjct: 578 VILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFD 637

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +   G + +    ++++D+     S  A  +++                    +  I P
Sbjct: 638 RMQKYGIEPSLKHYASIIDLLGRSGSLEAAEALV-------------------LSMPITP 678

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDM---LGRSGKLQE 709
             +   SLLSAC      + G++     +E     P+ + +++ + D+   LGR  ++++
Sbjct: 679 DGTVWGSLLSACKIHNEFEVGVRLARYAIES---DPKNDGYYIILSDLYSCLGRWDEVEK 735

Query: 710 AYEFIKNLPIQPKPGVWGAM 729
             + +K   ++ + G W A+
Sbjct: 736 VRDMMKKRGVEKRAG-WSAL 754



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 286/593 (48%), Gaps = 29/593 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+ +    +S +  YS   + ES+  +F E   KDVVTW A+I   V+N     GL    
Sbjct: 140 FVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLF 199

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM   G   +  T+     A   ++ L +G+ +H L++K G +    + +  ++MY++CG
Sbjct: 200 EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCG 259

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP--EKCLLYFREMGWSGEQADNVSLSSA 180
               +   F  +   D +SW +I++  +H+ +    +CL  F EM  S    D + +S  
Sbjct: 260 SPEEAYRCFCKLDQKDLISWTSIIA--VHSKFGLMSECLHLFWEMQASEIIPDEIVISCM 317

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGMTC 239
           +        +  GK  HA  +K   +      +T N+L+SMY + G +  A + F     
Sbjct: 318 LMGFGNSDRIFEGKAFHARILK---QCCALSGITHNALLSMYCKFGHLGTANKIFHSFH- 373

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K    W+ +I G++  G+ E+    L EM L+   EPD+ ++V++IS C+    +  GRS
Sbjct: 374 KSSEDWSTMILGYSNMGQKEKCISFLREMLLL-GREPDLNSLVSVISSCSQVGAINIGRS 432

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SG 354
           +H YAI+  +  ++ + NSLMD Y KS  ++    +F+      D++SWN++I     SG
Sbjct: 433 IHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQ-RDVISWNTLISSYKQSG 491

Query: 355 LFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
           +  E + L  +        +  T + +L +C    SL+ G+ IH +  + GF +N     
Sbjct: 492 ILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRT 551

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CG+L  +  L    +   D   WN++I     +GH + A++ F+ M ++ N 
Sbjct: 552 ALIDMYAKCGELETSRKLFNS-TEERDVILWNVMISNYGMHGHVESAMEIFQLM-EESNI 609

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-S 526
            P++ T ++++SAC +     EG+ L     K  +    +   ++I + GR   +++A +
Sbjct: 610 KPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLEAAEA 669

Query: 527 TVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRH-LEFEPNEISIVSILS 577
            V       +   W  ++SA    N+ EV  + L R+ +E +P       ILS
Sbjct: 670 LVLSMPITPDGTVWGSLLSACKIHNEFEV-GVRLARYAIESDPKNDGYYIILS 721



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 211/467 (45%), Gaps = 17/467 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL      +++L+ YS     E +   F +   KD+++W ++I    +   +   LH F
Sbjct: 240 GFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLF 299

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    I  D   +  ++      + + +G+  H   +K          N  ++MY K 
Sbjct: 300 WEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKF 359

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F   H   +  W+T++ G  +    EKC+ + REM   G + D  SL S +
Sbjct: 360 GHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVI 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           ++ + +G ++ G+ IH   IK    ++  VSV NSL+ MY + G + A  R F     +D
Sbjct: 419 SSCSQVGAINIGRSIHCYAIKNSIIEN--VSVANSLMDMYGKSGHVTATWRIFHRTLQRD 476

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWN +I  +  +G   EA  L  +M +   V P+  T + ++S CA    L EG  +H
Sbjct: 477 VISWNTLISSYKQSGILAEAIILFDKM-VKEKVYPNKVTCIIVLSACAHLASLDEGEKIH 535

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y        ++ +  +L+D Y+K   L  +  LFN+     D++ WN MIS        
Sbjct: 536 QYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEE-RDVILWNVMISNYGMHGHV 594

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F+ M     + +  T L++L +CN    +  G+ +     K G   +     ++
Sbjct: 595 ESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASI 654

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           + +    G L AA +L+  +    D + W  ++ AC  +  F+  ++
Sbjct: 655 IDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVR 701


>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
 gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
          Length = 666

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 202/667 (30%), Positives = 325/667 (48%), Gaps = 80/667 (11%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           DNVS  +A+ +   +  L+ GK IH L I+ G      +SV N+L++MY +CG +  A  
Sbjct: 5   DNVSFITALKSCVRIQSLAAGKFIHLLVIESGL--LTQISVGNALVNMYGKCGSLALARE 62

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F GM  +DV+SWNA+I  +A  G  +EA +L   MQ    +EPD  T V ++S C D  
Sbjct: 63  VFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPS 122

Query: 293 LLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
            L  G  +      R LL  D+++ N+L++ YSK  SL  A ++F  +  + D+VSWN++
Sbjct: 123 ALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERM-KIRDVVSWNAI 181

Query: 352 ISGL------------FKEM----------LYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
           IS L            F+EM            L   F+ ++ LA   +C  PE LE G+ 
Sbjct: 182 ISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALA---ACTGPEMLEEGRE 238

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           IH   ++ G  +  +  NAL+ MY NCG L  A    Q+++  +  S WN +I A   + 
Sbjct: 239 IHALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVS-WNAMIAAYVHHN 297

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             +EA + F  M Q +   P+SVT V  +SAC       +G  LH +  +S +  D  V 
Sbjct: 298 CDKEAFRIFHQM-QLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVG 356

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNL-------------------------------C 538
           NA++ M+ +C  +  A   F+     NL                                
Sbjct: 357 NAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVI 416

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TWN ++ A+ + +    A+ LFR +  E    N I+  ++L AC    +L  G++IH  +
Sbjct: 417 TWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELI 476

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G     F+ +AL+DM+  C               K  ++W+ +++A   +G   EA+
Sbjct: 477 GERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEAL 536

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           + F +M   GI+PT  + I +  ACSH+G +++    + ++  +Y + P   H+  + D+
Sbjct: 537 KQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDL 596

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G L EA E IK +P       W  +LSAC  HGD + G++VA  + +  P +    
Sbjct: 597 LGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAAR 656

Query: 761 ISLSNMY 767
           ++LSN++
Sbjct: 657 VALSNIF 663



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 176/668 (26%), Positives = 301/668 (45%), Gaps = 73/668 (10%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+  D+ + +  + +  ++  L  G+ +H L I++G++   S+ N  VNMY KCG L  +
Sbjct: 1   GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASAC 186
              F GM   D +SWN +++      + ++ +  F+ M   G  + D+V+  + V+A   
Sbjct: 61  REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              L  G  I AL  + G  DS  V + N+L++MYS+CG +++A   F  M  +DVVSWN
Sbjct: 121 PSALEAGDKIFALVEERGLLDSDVV-LGNALVNMYSKCGSLKSATMVFERMKIRDVVSWN 179

Query: 247 AIIDGFALNGKFEEAFDLLHEMQL------MRSVEPDIATVVTLISLCADSLLLREGRSV 300
           AII   A + + + A     EMQL        ++ PD  T+ + ++ C    +L EGR +
Sbjct: 180 AIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREI 239

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I R    +L++ N+L+  Y+   +L  A   F  +A  N +VSWN+MI+       
Sbjct: 240 HALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRN-VVSWNAMIAAYVHHNC 298

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F +M     Q +  T +  L +C++P + E G  +H    + G   +    NA
Sbjct: 299 DKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNA 358

Query: 409 LMHMYINCGDLVAAFSLLQRISHNS------------------------------DTSCW 438
           ++HM+  C  L  A +  QRI   +                              D   W
Sbjct: 359 VVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITW 418

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N+++ A  +    +EA++ F+ M  +   S +S+T   ++ AC    L  EG+ +H L  
Sbjct: 419 NMILGAYVEREMAKEAVRLFRRMIAEGTKS-NSITWTTMLGACAGEALLAEGRRIHELIG 477

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +     +  V NAL+ M+G+C  +  A   FE     +  +WN +++A +QN     AL+
Sbjct: 478 ERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALK 537

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            F  ++ E   P +++ + +  AC+  G L   K I   + H                Y 
Sbjct: 538 QFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRH---------------DYG 582

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                + +S M    G  G   EA E+   +  S     +   ++LLSAC   G V+ G 
Sbjct: 583 IAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFS---QDELPWMTLLSACKVHGDVERGR 639

Query: 676 QYYNNMLE 683
           +    +L 
Sbjct: 640 KVAGQVLR 647



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 177/648 (27%), Positives = 285/648 (43%), Gaps = 88/648 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    +L+  Y        +  +F    ++DV++WNA+ITA  +       +  F
Sbjct: 36  GLLTQISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELF 95

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYA 119
             M E+G I  DS T + +VSA    + L+ G  +  L  + G++ +D  L N  VNMY+
Sbjct: 96  QAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYS 155

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG----EQA--- 172
           KCG L S+   F  M   D VSWN I+S    ++  +  +  FREM   G    E+A   
Sbjct: 156 KCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAMQRFREMQLEGLSPKEEALLP 215

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +L+SA+AA      L  G+ IHAL I+ G E    + V N+L+SMY+ CG ++ A  
Sbjct: 216 DGFTLASALAACTGPEMLEEGREIHALVIERGCESE--LVVGNALVSMYANCGTLQDALE 273

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  ++VVSWNA+I  +  +   +EAF + H+MQL   V+P+  T VT +S C+   
Sbjct: 274 CFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQL-EGVQPNSVTFVTFLSACSTPA 332

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              +G  +H       L  D  + N+++  ++K  SL  A   F  I P  +L SWN ++
Sbjct: 333 AFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRI-PQKNLGSWNGLL 391

Query: 353 SG-------------------------------------------LFKEMLYLCSQFSFS 369
                                                        LF+ M+   ++ +  
Sbjct: 392 GAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSI 451

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T   +L +C     L  G+ IH    + G  +     NAL+ M+  C  L  A    +RI
Sbjct: 452 TWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERI 511

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               D S WN+++ A  QNG  +EA+K F  M Q++   P  VT + V  AC +     +
Sbjct: 512 -RGKDASSWNVLVAALAQNGDAEEALKQFLQM-QREGIKPTDVTFIVVFWACSHAGRLEQ 569

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            K++   +L+   G+       L + Y    D+   +   +                   
Sbjct: 570 AKTIFA-SLRHDYGI-----APLPSHYSGMTDLLGRAGFLDE------------------ 605

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
                 A E+ + + F  +E+  +++LSAC   G +  G+++ G V  
Sbjct: 606 ------AEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLR 647



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 225/508 (44%), Gaps = 54/508 (10%)

Query: 1   RGFL-AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           RG L + +    +L+  YS     +S+  +F     +DVV+WNA+I+A   +    + + 
Sbjct: 137 RGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAMQ 196

Query: 60  FFGEM-------VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN 112
            F EM        EE +  D  TL   ++A T    L++GR +H L I+ G  ++  + N
Sbjct: 197 RFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGN 256

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
             V+MYA CG L  +   F  M   + VSWN +++  +H+N  ++    F +M   G Q 
Sbjct: 257 ALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQP 316

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           ++V+  + ++A +       G  +H++  + G E     SV N+++ M+++C  ++ A  
Sbjct: 317 NSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEAD--ASVGNAVVHMFAKCWSLDDALA 374

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEA---FDLLHE-------MQLMRSVEPDIA--- 279
           AF  +  K++ SWN ++  +   G+  EA   F+++ E       M L   VE ++A   
Sbjct: 375 AFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEA 434

Query: 280 -----------------TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
                            T  T++  CA   LL EGR +H     R    +L + N+L+D 
Sbjct: 435 VRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDM 494

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFST 370
           + K  SL  A   F  I    D  SWN +++ L            F +M     + +  T
Sbjct: 495 FGKCASLGGARQAFERIRG-KDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVT 553

Query: 371 LLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
            + +  +C+    LE  K+I    +   G +      + +  +    G L  A  +++RI
Sbjct: 554 FIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRI 613

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKT 457
             + D   W  ++ AC  +G  +   K 
Sbjct: 614 PFSQDELPWMTLLSACKVHGDVERGRKV 641



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 150/297 (50%), Gaps = 33/297 (11%)

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD+V+ +  + +C  ++    GK +H L ++S +     V NAL+ MYG+C  +  A  V
Sbjct: 4   PDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREV 63

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGV 584
           F+   + ++ +WN +I+A++Q      A+ELF+ ++     EP+ ++ V+++SAC     
Sbjct: 64  FDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSA 123

Query: 585 LRHGKQIHGHVFHLGFQENSFI-SSALLDMYSNC---------------KSNAAWSSMIS 628
           L  G +I   V   G  ++  +  +AL++MYS C               +   +W+++IS
Sbjct: 124 LEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIIS 183

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVI-------SLLSACSHSGLVDEGLQYYNNM 681
           A   H +   A++ F EM   G+ P + +++       S L+AC+   +++EG + +  +
Sbjct: 184 ALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALV 243

Query: 682 LEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           +E      E+E  V   +V M    G LQ+A E  + +  Q     W AM++A  HH
Sbjct: 244 IERG---CESELVVGNALVSMYANCGTLQDALECFQKMA-QRNVVSWNAMIAAYVHH 296



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 4/285 (1%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L +   LL AY +V     +  LF     +DV+TWN ++ A VE       +  F  M+
Sbjct: 383 NLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMI 442

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG + +S T   ++ A      L +GR +H L  + G  ++  + N  V+M+ KC  L 
Sbjct: 443 AEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLG 502

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  +   D  SWN +++    N   E+ L  F +M   G +  +V+      A +
Sbjct: 503 GARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACS 562

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVS 244
             G L   K I A  ++  Y  +P  S  + +  +  + G ++ AE     +   +D + 
Sbjct: 563 HAGRLEQAKTIFA-SLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQDELP 621

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           W  ++    ++G  E    +    Q++R    D A  V L ++ A
Sbjct: 622 WMTLLSACKVHGDVERGRKVAG--QVLRWNPGDSAARVALSNIFA 664


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 192/631 (30%), Positives = 324/631 (51%), Gaps = 59/631 (9%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW   +     +N   + +  + +M  SG   D+ +    + A   L +L+ GK IHA  
Sbjct: 44  SWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHV 103

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K GYE S  V++ NSL++ Y +C +++   + F  +  +D+VSWN++I  F    ++E 
Sbjct: 104 VKYGYESSS-VAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWEL 162

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLLMMN 317
           A +    M L   +EP   T+V+ +  C++      LR G+ +HGY  R    +     N
Sbjct: 163 ALEAFRFM-LAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFTNN 220

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS-------- 369
           +LM  Y+    L  A+ LF      N L+SWN+MIS   +   ++ +  S          
Sbjct: 221 ALMTMYANLGRLDDAKFLFKLFEDRN-LISWNTMISSFSQNERFVEALMSLRYMVLEGVK 279

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDLVAAF 423
               TL ++LP+C+  E L  GK IH + L+ G    N+ +G +AL+ MY NCG + +  
Sbjct: 280 PDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVG-SALVDMYCNCGQVGSGR 338

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +   I     T  WN +I    QN H ++A+  F  M       P++ T+ +++ A   
Sbjct: 339 RVFDGILERK-TGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
            E  F  +S+HG  +K  +  D  VQNAL+ MY R R ++ + T+F+S    ++ +WN M
Sbjct: 398 CESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTM 457

Query: 544 ISAFSQNKAEVRALELFRHLE----------------FEPNEISIVSILSACTQLGVLRH 587
           I+ +  +     AL +   ++                F+PN I+++++L  C  L  L  
Sbjct: 458 ITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAK 517

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           GK+IH +           + SAL+DMY+ C               K+   W+ ++ AYG 
Sbjct: 518 GKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGM 577

Query: 633 HGKGWEAIELFHEMCNSG-----IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           HG G EA+ELF +M   G     ++PT+ ++I++L+ACSHSG+VDEGL+ ++ M +++ +
Sbjct: 578 HGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGI 637

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
            P  +H+ C+ D+LGR+GK+++AY+FI  +P
Sbjct: 638 EPGPDHYACVADLLGRAGKVEQAYDFINTMP 668



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 274/569 (48%), Gaps = 48/569 (8%)

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKC 121
           +M+  G+  DS    +++ A+T +  L  G+ +H   +K G  + S ++ N  VN Y KC
Sbjct: 67  DMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSLVNFYGKC 126

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L+     F  ++  D VSWN+++S        E  L  FR M     +  + +L S V
Sbjct: 127 SELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPV 186

Query: 182 AASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            A + L +   L  GK IH    + G+  +      N+L++MY+  G ++ A+  F    
Sbjct: 187 IACSNLRKHEGLRLGKQIHGYCFRNGHWST---FTNNALMTMYANLGRLDDAKFLFKLFE 243

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            ++++SWN +I  F+ N +F EA   L  M ++  V+PD  T+ +++  C+   +L  G+
Sbjct: 244 DRNLISWNTMISSFSQNERFVEALMSLRYM-VLEGVKPDGVTLASVLPACSYLEMLGTGK 302

Query: 299 SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
            +H YA+R   L  +  + ++L+D Y     +     +F+ I      + WN+MI+G   
Sbjct: 303 EIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGL-WNAMIAGYAQ 361

Query: 355 ---------LFKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                    LF EM+    LC   + +T+ +I+P+    ES    +SIH + +K     +
Sbjct: 362 NEHDEKALMLFIEMVAVAGLCP--NTTTMASIVPASARCESFFSKESIHGYVIKRDLERD 419

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               NALM MY     +  + ++   +    D   WN +I     +G + +A+     M 
Sbjct: 420 RYVQNALMDMYSRMRKMEISKTIFDSMEVR-DIVSWNTMITGYVISGCYNDALLMLHEMQ 478

Query: 463 ------------QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
                       +Q    P+S+TL+ V+  C +L    +GK +H  A+++ +  +  V +
Sbjct: 479 HANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGS 538

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL------- 563
           AL+ MY +C  +  +  VF+     N+ TWN ++ A+  +     ALELF+ +       
Sbjct: 539 ALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNV 598

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQI 591
            E +P E+++++IL+AC+  G++  G ++
Sbjct: 599 GEVKPTEVTMIAILAACSHSGMVDEGLKL 627



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 252/518 (48%), Gaps = 40/518 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + SL+  Y   S  +    +F     +D+V+WN++I+A    +   + L  F  M+ E +
Sbjct: 116 ANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDL 175

Query: 70  RFDSTTL---LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              S TL   +I  S L +   L+ G+ +H    + G  + +   N  + MYA  G L+ 
Sbjct: 176 EPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWS-TFTNNALMTMYANLGRLDD 234

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           ++  F      + +SWNT++S    N    + L+  R M   G + D V+L+S + A + 
Sbjct: 235 AKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSY 294

Query: 187 LGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           L  L  GK IHA  ++ G   E+S    V ++L+ MY  CG + +  R F G+  +    
Sbjct: 295 LEMLGTGKEIHAYALRSGDLIENS---FVGSALVDMYCNCGQVGSGRRVFDGILERKTGL 351

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WNA+I G+A N   E+A  L  EM  +  + P+  T+ +++   A         S+HGY 
Sbjct: 352 WNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYV 411

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           I+R L  D  + N+LMD YS+   +  ++ +F+++  + D+VSWN+MI+G          
Sbjct: 412 IKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSME-VRDIVSWNTMITGYVISGCYNDA 470

Query: 355 --LFKEMLY-------------LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
             +  EM +              C + +  TL+ +LP C S  +L  GK IH + ++   
Sbjct: 471 LLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNAL 530

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           ++     +AL+ MY  CG L  +  +  ++    +   WN++++A   +G+ +EA++ FK
Sbjct: 531 ASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIK-NVITWNVIVMAYGMHGNGEEALELFK 589

Query: 460 SMTQQQN----ASPDSVTLVNVISACGNLELAFEGKSL 493
            M  + +      P  VT++ +++AC +  +  EG  L
Sbjct: 590 DMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKL 627



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 209/402 (51%), Gaps = 34/402 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+ +L+T Y+N+   + +  LF    ++++++WN MI++  +N   V  L     MV EG
Sbjct: 218 TNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEG 277

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSS 127
           ++ D  TL  ++ A + +  L  G+ +H  ++++G +I +S + +  V+MY  CG + S 
Sbjct: 278 VKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSG 337

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASAC 186
              F G+    T  WN +++G   N + EK L+ F EM   +G   +  +++S V ASA 
Sbjct: 338 RRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASAR 397

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
                  + IH   IK   E   YV   N+L+ MYS+   +E ++  F  M  +D+VSWN
Sbjct: 398 CESFFSKESIHGYVIKRDLERDRYVQ--NALMDMYSRMRKMEISKTIFDSMEVRDIVSWN 455

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRS------------VEPDIATVVTLISLCADSLLL 294
            +I G+ ++G + +A  +LHEMQ                 +P+  T++T++  CA    L
Sbjct: 456 TMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAAL 515

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +G+ +H YA+R  L  ++ + ++L+D Y+K   L+ +  +F+ + P+ ++++WN ++  
Sbjct: 516 AKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQM-PIKNVITWNVIVMA 574

Query: 355 ------------LFKEMLYLCSQF-----SFSTLLAILPSCN 379
                       LFK+M+           +  T++AIL +C+
Sbjct: 575 YGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACS 616



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 27/241 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEEGI 69
           +L+  YS +   E S  +F     +D+V+WN MIT  V + C    L    EM    EGI
Sbjct: 425 ALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGI 484

Query: 70  -----------RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
                      + +S TL+ ++     +  L +G+ +H  +++  + ++ ++ +  V+MY
Sbjct: 485 NKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMY 544

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTI-MSGCLHNNYPEKCLLYFREMGWSGE-----QA 172
           AKCG LN S   F  M   + ++WN I M+  +H N  E+ L  F++M   G+     + 
Sbjct: 545 AKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGN-GEEALELFKDMVAKGDNVGEVKP 603

Query: 173 DNVSLSSAVAASACLGELSYG-KVIHALGIKLGYEDSP--YVSVTNSLISMYSQCGDIEA 229
             V++ + +AA +  G +  G K+ H +    G E  P  Y  V + L     + G +E 
Sbjct: 604 TEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLL----GRAGKVEQ 659

Query: 230 A 230
           A
Sbjct: 660 A 660


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 204/662 (30%), Positives = 340/662 (51%), Gaps = 41/662 (6%)

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   ++ + ++ E+  +G Q  +VS+   +  +       +GK +HA  IK G++   + 
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDS--FT 82

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           S+ NS++  Y +CGD + A   F  M   +D VSWN +I G   NG            ++
Sbjct: 83  SIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARV 142

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
               EP+I+T+V +I  C       +G  +HGY I+        + NSL+  Y  ++ + 
Sbjct: 143 A-GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-ME 200

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPS 377
            A  LF+ +    D+++W+ MI G            +F++M+ +   +     ++++L +
Sbjct: 201 CARELFDEMHE-KDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKA 259

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C S   +  G+ +H   +  GF  +    N+L+ MY  C D  +AF +   IS  ++ S 
Sbjct: 260 CASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVS- 318

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN ++     N ++ EA     SM +++    D VTLVN++  C      F  KS+H + 
Sbjct: 319 WNSMLSGFVLNENYSEAQSLISSM-RKERVETDEVTLVNILQICKYFVHPFHCKSIHCVM 377

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           ++     +  V +ALI  Y +C  I+ A  VF      ++ +W+ MIS F+       A+
Sbjct: 378 IRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAI 437

Query: 558 ELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            +++ ++    +PN I+I+++L AC+    L+  K  HG     GF     + +A++DMY
Sbjct: 438 AVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMY 497

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C               K+   WS+MI+AYG +G   EA+ LF EM   G++P   + +
Sbjct: 498 SKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTL 557

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L+ACSH GLV+EGL  + +M++E  + P  EH+ C+VDMLGR+GKL  A E IK +P 
Sbjct: 558 SVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPD 617

Query: 720 QPKPG--VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
             K G  +WG++LSAC  +G T++GK+    + +LEP N   Y+  S+MY A G W DA 
Sbjct: 618 NLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAA 677

Query: 778 EI 779
            I
Sbjct: 678 RI 679



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 298/589 (50%), Gaps = 30/589 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF +      S++  Y     F+ ++ +F     ++D V+WN +I   ++N  +V GL 
Sbjct: 76  QGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLW 135

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +F      G   + +T+++++ A   +     G ++H   IK+G  A SS+ N  ++MY 
Sbjct: 136 WFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYV 195

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLS 178
              D+  +   F  MH  D ++W+ ++ G L    P+  L  FR+M    G + D V + 
Sbjct: 196 D-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMV 254

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A A   ++  G+++H L I  G++   +V   NSLI MYS+C D  +A + F  ++
Sbjct: 255 SVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVE--NSLIDMYSKCKDAGSAFKVFNEIS 312

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            ++ VSWN+++ GF LN  + EA  L+  M+  R VE D  T+V ++ +C   +     +
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKER-VETDEVTLVNILQICKYFVHPFHCK 371

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           S+H   IRR    + L++++L+D Y+K   +  A  +F A     D+VSW++MISG    
Sbjct: 372 SIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVF-ARMRRRDVVSWSTMISGFAHC 430

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   +++EM     + +  T++ +L +C+    L+  K  H   ++ GF++     
Sbjct: 431 GKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVG 490

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            A++ MY  CG+++A+     +++  +  + W+ +I A   NG   EA+  F  M ++  
Sbjct: 491 TAVVDMYSKCGEILASRRAFDQLALKNIVT-WSAMIAAYGMNGLAHEALALFAEM-KRHG 548

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
             P+ VT ++V++AC +  L  EG SL    ++ L GL+   ++   ++ M GR   + +
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQEL-GLEPGFEHYSCMVDMLGRAGKLDT 607

Query: 525 ASTVFESCYNCNL----CTWNCMISA-FSQNKAEVRALELFRHLEFEPN 568
           A  V ++  + NL      W  ++SA  S    E+    + R LE EP+
Sbjct: 608 AIEVIKAMPD-NLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 204/662 (30%), Positives = 340/662 (51%), Gaps = 41/662 (6%)

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   ++ + ++ E+  +G Q  +VS+   +  +       +GK +HA  IK G++   + 
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACLIKQGFDS--FT 82

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           S+ NS++  Y +CGD + A   F  M   +D VSWN +I G   NG            ++
Sbjct: 83  SIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARV 142

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
               EP+I+T+V +I  C       +G  +HGY I+        + NSL+  Y  ++ + 
Sbjct: 143 A-GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-ME 200

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPS 377
            A  LF+ +    D+++W+ MI G            +F++M+ +   +     ++++L +
Sbjct: 201 CARELFDEMHE-KDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKA 259

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C S   +  G+ +H   +  GF  +    N+L+ MY  C D  +AF +   IS  ++ S 
Sbjct: 260 CASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVS- 318

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN ++     N ++ EA     SM +++    D VTLVN++  C      F  KS+H + 
Sbjct: 319 WNSMLSGFVLNENYSEAQSLISSM-RKERVETDEVTLVNILQICKYFVHPFHCKSIHCVM 377

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           ++     +  V +ALI  Y +C  I+ A  VF      ++ +W+ MIS F+       A+
Sbjct: 378 IRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAI 437

Query: 558 ELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            +++ ++    +PN I+I+++L AC+    L+  K  HG     GF     + +A++DMY
Sbjct: 438 AVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMY 497

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C               K+   WS+MI+AYG +G   EA+ LF EM   G++P   + +
Sbjct: 498 SKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTL 557

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L+ACSH GLV+EGL  + +M++E  + P  EH+ C+VDMLGR+GKL  A E IK +P 
Sbjct: 558 SVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPH 617

Query: 720 QPKPG--VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
             K G  +WG++LSAC  +G T++GK+    + +LEP N   Y+  S+MY A G W DA 
Sbjct: 618 NLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAA 677

Query: 778 EI 779
            I
Sbjct: 678 RI 679



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 298/589 (50%), Gaps = 30/589 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF +      S++  Y     F+ ++ +F     ++D V+WN +I   ++N  +V GL 
Sbjct: 76  QGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLW 135

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +F      G   + +T+++++ A   +     G ++H   IK+G  A SS+ N  ++MY 
Sbjct: 136 WFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYV 195

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLS 178
              D+  +   F  MH  D ++W+ ++ G L    P+  L  FR+M    G + D V + 
Sbjct: 196 D-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMV 254

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A A   ++  G+++H L I  G++   +V   NSLI MYS+C D  +A + F  ++
Sbjct: 255 SVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVE--NSLIDMYSKCKDAGSAFKVFNEIS 312

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            ++ VSWN+++ GF LN  + EA  L+  M+  R VE D  T+V ++ +C   +     +
Sbjct: 313 QRNNVSWNSMLSGFVLNENYSEAQSLISSMRKER-VETDEVTLVNILQICKYFVHPFHCK 371

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           S+H   IRR    + L++++L+D Y+K   +  A  +F A     D+VSW++MISG    
Sbjct: 372 SIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVF-ARMRRRDVVSWSTMISGFAHC 430

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   +++EM     + +  T++ +L +C+    L+  K  H   ++ GF++     
Sbjct: 431 GKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVG 490

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            A++ MY  CG+++A+     +++  +  + W+ +I A   NG   EA+  F  M ++  
Sbjct: 491 TAVVDMYSKCGEILASRRAFDQLALKNIVT-WSAMIAAYGMNGLAHEALALFAEM-KRHG 548

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
             P+ VT ++V++AC +  L  EG SL    ++ L GL+   ++   ++ M GR   + +
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQEL-GLEPGFEHYSCMVDMLGRAGKLDT 607

Query: 525 ASTVFESCYNCNL----CTWNCMISA-FSQNKAEVRALELFRHLEFEPN 568
           A  V ++  + NL      W  ++SA  S    E+    + R LE EP+
Sbjct: 608 AIEVIKAMPH-NLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 203/641 (31%), Positives = 328/641 (51%), Gaps = 48/641 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D V+L   +A  AC G+L  G  IH      G+  + +V V+N+++ MY + G  + A  
Sbjct: 2   DEVTL--CLALKACRGDLKRGCQIHGFSTTCGF--TSFVCVSNAVMGMYRKAGRFDNALY 57

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  +   DVVSWN I+ GF  N   + A + +  M+    V  D  T  T +S C  S 
Sbjct: 58  IFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMK-SAGVVFDAFTYSTALSFCVGSE 113

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             R G  +    ++  L  DL++ NS +  YS+S S   A  +F+ + P  D++SWNS++
Sbjct: 114 GFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEM-PFKDMISWNSLL 172

Query: 353 SGL-------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           SGL             F++M+    +    +  +++ +C     L+  + IH   +K G+
Sbjct: 173 SGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 232

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +     N LM  Y  CG L A  S+  ++S  +  S W  +I     + +  +A+  F 
Sbjct: 233 ESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVS-WTTMI-----SSNRDDAVSIFL 286

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           +M +     P+ VT V +++A    E   EG  +HGL +K+    +  V N+ ITMY + 
Sbjct: 287 NM-RLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKF 345

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--PNEISIVSILS 577
             ++ A   F+      + +WN MIS F+QN     AL++F     E  PNE +  S+L+
Sbjct: 346 EALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETMPNEYTFGSVLN 405

Query: 578 ACT--QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSN 620
           A    +   ++HG++ H H+  LG      +SSALLDMY+               + ++ 
Sbjct: 406 AIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQ 465

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             W+S+ISAY  HG     + LFHEM    + P   + +S+L+AC+  G+VD+G +  N 
Sbjct: 466 FVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNM 525

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M+E+Y++ P  EH+ C+VDMLGR+G+L+EA E +  +P  P   +  +ML +C  HG+ K
Sbjct: 526 MIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 585

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           MG +VAEL  +++PE  G Y+ + N+Y    +W  A EI K
Sbjct: 586 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRK 626



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 291/637 (45%), Gaps = 64/637 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S +++  Y     F+++L +F    + DVV+WN +++   +N+   + L+F 
Sbjct: 31  GFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDDNQ---IALNFV 87

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+ FD+ T    +S        + G  +    +K+G+ +D  + N F+ MY++ 
Sbjct: 88  VRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRS 147

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G    +   F  M   D +SWN+++SG      +  + +L FR+M   G + D+VS +S 
Sbjct: 148 GSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSV 207

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +       +L   + IH L IK GYE    + V N L+S YS+CG +EA +  F+ M+ +
Sbjct: 208 ITTCCHETDLKLARQIHGLCIKRGYE--SLLEVGNILMSRYSKCGVLEAVKSVFYQMSER 265

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW  +I     +   ++A  +   M+L   V P+  T V L++    +  ++EG  +
Sbjct: 266 NVVSWTTMI-----SSNRDDAVSIFLNMRL-DGVYPNEVTFVGLLNAVKCNEQIKEGLKI 319

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-- 358
           HG  I+     +  + NS +  Y+K  +L  A+  F+ I    +++SWN+MISG  +   
Sbjct: 320 HGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDIT-FREIISWNAMISGFAQNGF 378

Query: 359 -----MLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 ++L +       +++F ++L  +       S++ G+  H   LKLG ++  +  
Sbjct: 379 SHEALKMFLSATAETMPNEYTFGSVLNAIAFAEDI-SVKHGQRCHAHLLKLGLNSCPVVS 437

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +AL+ MY   G++  +  +   +S   +   W  +I A + +G F   +  F  M  ++N
Sbjct: 438 SALLDMYAKRGNINESEKVFNEMSQR-NQFVWTSIISAYSSHGDFNSVMNLFHEMI-KEN 495

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            +PD VT ++V++AC                 K ++     + N +I  Y          
Sbjct: 496 VAPDLVTFLSVLTACNR---------------KGMVDKGHEILNMMIEDYN--------- 531

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
              E  +      ++CM+    +      A EL   +   P E  + S+L +C   G ++
Sbjct: 532 --LEPSHE----HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 585

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
            G +    V  L  +    +S + + MY+       W
Sbjct: 586 MGAK----VAELAMEMKPELSGSYVQMYNIYAEKEQW 618



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 281/620 (45%), Gaps = 54/620 (8%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK+G  +H  S   G  +   + N  + MY K G  +++   F  +   D VSWNTI+SG
Sbjct: 17  LKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSG 76

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY--GKVIHALGIKLGYE 206
              N   +  L +   M  +G   D  + S+A+  S C+G   +  G  + +  +K G E
Sbjct: 77  FDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCVGSEGFRLGLQLQSTVVKSGLE 131

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
               + V NS I+MYS+ G    A R F  M  KD++SWN+++ G +  G F     L+ 
Sbjct: 132 SD--LVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIF 189

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM--NSLMDFYS 324
              +   VE D  +  ++I+ C     L+  R +HG  I+R  GY+ L+   N LM  YS
Sbjct: 190 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR--GYESLLEVGNILMSRYS 247

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAILPS 377
           K   L   + +F  ++  N +VSW +MIS        +F  M       +  T + +L +
Sbjct: 248 KCGVLEAVKSVFYQMSERN-VVSWTTMISSNRDDAVSIFLNMRLDGVYPNEVTFVGLLNA 306

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
               E ++ G  IH   +K GF +     N+ + MY     L  A      I+     S 
Sbjct: 307 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIIS- 365

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE--LAFEGKSLHG 495
           WN +I    QNG   EA+K F S T +    P+  T  +V++A    E      G+  H 
Sbjct: 366 WNAMISGFAQNGFSHEALKMFLSATAE--TMPNEYTFGSVLNAIAFAEDISVKHGQRCHA 423

Query: 496 LALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
             LK  +GL++   V +AL+ MY +  +I  +  VF      N   W  +ISA+S +   
Sbjct: 424 HLLK--LGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDF 481

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
              + LF  +  E   P+ ++ +S+L+AC + G++  G +I                + +
Sbjct: 482 NSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEIL---------------NMM 526

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
           ++ Y+   S+  +S M+   G  G+  EA EL  E+      P +S + S+L +C   G 
Sbjct: 527 IEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG---PGESMLQSMLGSCRLHGN 583

Query: 671 VDEGLQYYNNMLEEYDVRPE 690
           V  G +     +E   ++PE
Sbjct: 584 VKMGAKVAELAME---MKPE 600



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 174/348 (50%), Gaps = 24/348 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+ + L     L++ YS     E+  ++FY+   ++VV+W  MI++  ++      +  
Sbjct: 230 RGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNRDD-----AVSI 284

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  +G+  +  T + +++A+     +K+G  +H L IK G +++ S+ N F+ MYAK
Sbjct: 285 FLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAK 344

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L  ++  F  +   + +SWN ++SG   N +  + L  F  +  + E   N     +
Sbjct: 345 FEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMF--LSATAETMPNEYTFGS 402

Query: 181 VAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           V  +    E   + +G+  HA  +KLG    P VS  ++L+ MY++ G+I  +E+ F  M
Sbjct: 403 VLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNINESEKVFNEM 460

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + ++   W +II  ++ +G F    +L HEM +  +V PD+ T +++++ C      R+G
Sbjct: 461 SQRNQFVWTSIISAYSSHGDFNSVMNLFHEM-IKENVAPDLVTFLSVLTACN-----RKG 514

Query: 298 RSVHGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAI 339
               G+ I  ++  D  +  S      ++D   ++  L +AE L + +
Sbjct: 515 MVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 223/698 (31%), Positives = 350/698 (50%), Gaps = 45/698 (6%)

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR---EMGWSGEQADN 174
           Y++ G L SS   F      D+  ++ ++   L N+   + L  F    +MG    Q   
Sbjct: 43  YSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCA 102

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGY-EDSPYVSVTNSLISMYSQCGDIEAAERA 233
               S + A   +GEL  G+ +H   +K G+ ED     +  SL+ MY +   +  A++ 
Sbjct: 103 FLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRV---IGTSLVGMYGELCFLRDAKKV 159

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  M  +D+V W++II  +  NG + E  ++   M +   + PD   ++++   C     
Sbjct: 160 FDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSM-ICEGIRPDSVMLLSVAEACGKIGC 218

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           LR  +SVHGY +R  +  D  + NSL+  YS+   L +A+ LF  I        W SMIS
Sbjct: 219 LRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDD-RSTSCWTSMIS 277

Query: 354 GL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLK--LGF 399
                  F+E L +  +   S       T++++L SC     L+ GKS+HC+ L+  +G 
Sbjct: 278 AYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGV 337

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           +   +G  AL+  Y  C  + +   LL  I  N +   WN +I    + G   EA+  F 
Sbjct: 338 TGLDLG-PALIDFYSACWKMSSCEKLLHSIG-NENIVSWNTLISFYAREGLNDEAMAFFA 395

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  +    PDS +L + ISA  +      G+ +HG  +K     D  VQN+L+ MY +C
Sbjct: 396 CMVAK-GIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKC 453

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSIL 576
               SA T+F    + ++  WNCMI  FSQN   V AL LF  +     E N+++ +S +
Sbjct: 454 GFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAI 513

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+ LG L  GK IH  +   G Q + +I +AL+DMY+ C               KS  
Sbjct: 514 QACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVV 573

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +WS+MI+A+G HG+   A  LFH+M  S I+P + + +++LSAC H+G V EG  Y+N M
Sbjct: 574 SWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTM 633

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            + Y + P  EH   IVD+L R+G +  AYE IK++       +WGA+L+ C  +G   M
Sbjct: 634 RDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDM 693

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            + +AE L  +  ++ GYY  LSN+Y   G W ++ ++
Sbjct: 694 IEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYESRKV 731



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 182/599 (30%), Positives = 301/599 (50%), Gaps = 26/599 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST LL +YS +   +SS  +FY   + D   ++ +I   + N      L  F   ++ G 
Sbjct: 36  STKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGS 95

Query: 70  RFDSTTLLI---IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +       +   ++ A+T +  L  GR +H   +K+G   D  +    V MY +   L  
Sbjct: 96  KLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRD 155

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           ++  F  M   D V W++I+S  + N    + L  FR M   G + D+V L S   A   
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           +G L   K +H   ++ G       S++NSLI MYSQCG +  A+R F  +  +    W 
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDG--SLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWT 273

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I  +  N  FEEA D+  +MQ    VEP+  T++++++ CA    L+EG+SVH + +R
Sbjct: 274 SMISAYNQNECFEEALDVFIKMQ-DSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLR 332

Query: 307 RLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
             +G   L +  +L+DFYS    +S  E L ++I   N +VSWN++IS   +E L   + 
Sbjct: 333 NAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNEN-IVSWNTLISFYAREGLNDEAM 391

Query: 366 FSFSTLLA--ILPS----------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F+ ++A  I+P             S  S++FG+ IH   +K GF +  +  N+LM MY
Sbjct: 392 AFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQ-NSLMDMY 450

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG   +A+++  +I H S  + WN +I   +QNG   EA+  F  M + +    + VT
Sbjct: 451 SKCGFASSAYTIFNKIKHKSIVA-WNCMICGFSQNGISVEALSLFDEMFKNR-LEINKVT 508

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            ++ I AC NL    +GK +H   + +    D  +  AL+ MY +C D+++A  VF+S  
Sbjct: 509 FLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIV 568

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
             ++ +W+ MI+A   +     A  LF  +     +PNE++ ++ILSAC   G ++ GK
Sbjct: 569 EKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGK 627



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 267/550 (48%), Gaps = 33/550 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       TSL+  Y  + +   +  +F E C +D+V W+++I+  VEN     GL  F
Sbjct: 132 GFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMF 191

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EGIR DS  LL +  A  ++ CL+  + VH   ++ GM+ D SL N  + MY++C
Sbjct: 192 RSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQC 251

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F  +    T  W +++S    N   E+ L  F +M  S  + ++V++ S +
Sbjct: 252 GYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVL 311

Query: 182 AASACLGELSYGKVIH------ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
            + A LG L  GK +H      A+G+  G +  P      +LI  YS C  + + E+   
Sbjct: 312 NSCARLGRLKEGKSVHCFVLRNAMGVT-GLDLGP------ALIDFYSACWKMSSCEKLLH 364

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  +++VSWN +I  +A  G  +EA      M + + + PD  ++ + IS  A S  ++
Sbjct: 365 SIGNENIVSWNTLISFYAREGLNDEAMAFFACM-VAKGIMPDSFSLASSISASASSGSIQ 423

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ +HG+ ++R   +D  + NSLMD YSK    S A  +FN I     +V+WN MI G 
Sbjct: 424 FGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKH-KSIVAWNCMICGF 481

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      LF EM     + +  T L+ + +C++   L+ GK IH   +  G  N+ 
Sbjct: 482 SQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDL 541

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
               AL+ MY  CGDL  A  +   I   S  S W+ +I A   +G    A   F  M  
Sbjct: 542 YIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVS-WSTMIAAHGIHGQINAATSLFHKMV- 599

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRD 521
             N  P+ VT +N++SAC +     EGK  +   ++   G+   V++  +++ +  R  D
Sbjct: 600 LSNIKPNEVTFMNILSACRHAGSVKEGK-FYFNTMRDYYGIVPNVEHFASIVDLLSRAGD 658

Query: 522 IKSASTVFES 531
           I  A  + +S
Sbjct: 659 INGAYEIIKS 668



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 242/523 (46%), Gaps = 52/523 (9%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI- 352
           LR    +H + +   L  + L    L++ YS+  SL  + L+F    P  D   ++ +I 
Sbjct: 14  LRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYT-HPSPDSFMFSVLIK 72

Query: 353 ----SGLFKEMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
               + LF+E+L L           +Q       +++ +      L  G+ +H   LK G
Sbjct: 73  CHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSG 132

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F  + +   +L+ MY     L  A  +   +    D   W+ +I    +NG ++E ++ F
Sbjct: 133 FCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVR-DLVLWSSIISCYVENGVYREGLEMF 191

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           +SM   +   PDSV L++V  ACG +      KS+HG  ++  M  D  + N+LI MY +
Sbjct: 192 RSMI-CEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQ 250

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSI 575
           C  +  A  +FE   + +   W  MISA++QN+    AL++F  +   E EPN+++++S+
Sbjct: 251 CGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISV 310

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALLDMYSNC---------------KS 619
           L++C +LG L+ GK +H  V           +  AL+D YS C               ++
Sbjct: 311 LNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNEN 370

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W+++IS Y   G   EA+  F  M   GI P   S+ S +SA + SG +  G Q + 
Sbjct: 371 IVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHG 430

Query: 680 NMLEE--YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHH 736
           ++++   +D   +      ++DM  + G    AY       I+ K  V W  M+   S +
Sbjct: 431 HVMKRGFFDEFVQNS----LMDMYSKCGFASSAYTIFN--KIKHKSIVAWNCMICGFSQN 484

Query: 737 GDTKMGKQVAELLFK--LEPENVGYYISL---SNM-YVALGRW 773
           G +     + + +FK  LE   V +  ++   SN+ Y+  G+W
Sbjct: 485 GISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKW 527


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 223/787 (28%), Positives = 356/787 (45%), Gaps = 91/787 (11%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            E +  L  E  N+ V  + A+I +   +         F  MV EG+  D   +  I+ A
Sbjct: 133 LEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKA 192

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            + M   + G++VH   I+  + +D  + N  ++ Y+ CGDL SS   F  M   D VSW
Sbjct: 193 CSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSW 252

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
             ++S  +     ++    F  M   G + D +S S+ ++  A  GE           I 
Sbjct: 253 TALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGE-----------ID 301

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           L  E                     E  ER         V SWN II G   NG  E+A 
Sbjct: 302 LALETLE------------------EMPERGLQ----PTVNSWNGIISGCVQNGYLEDAL 339

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           D+   M L    +P+I T+ +++  C     LR G+++H  A +  +  ++ +  S++D 
Sbjct: 340 DMFSRM-LWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDM 398

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           YSK  S   AE +F   A   +   WN MI+    E             L +L S     
Sbjct: 399 YSKCGSYDYAEKVFXK-AENKNTAMWNEMIAAYVNEG-------KVEDALGLLRSMQ--- 447

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH---NSDTSCWN 439
                        K G+  + I  N ++  +   G    A  LL  +       +   +N
Sbjct: 448 -------------KDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFN 494

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNA-----------SPDSVTLVNVISACGNLELAF 488
           ++I    Q+G   EA+K F+ M    +             P+ +T+   + AC +L L  
Sbjct: 495 VLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWC 554

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +GK +HG  L++    +  V +AL+ MY +C D+ SA+ VF      N  +WN +++ + 
Sbjct: 555 QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 614

Query: 549 QNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE-NS 604
            NK    AL+LF  +     +P+ I+ + +  AC  +  +R G+ +HG+       E  +
Sbjct: 615 NNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKN 674

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I SAL+DMY+ C               K    W++MISA+  HG    A  +F +M   
Sbjct: 675 AIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL 734

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           GI P   + +SLLSAC+  GLV+EG +Y+N+M   Y V    EH+ C+V +LG +G L E
Sbjct: 735 GIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDE 794

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A +FI+ +P  P   +W  +L AC  H + ++G++ A+ LF+LEP+N   Y+ LSN+YV+
Sbjct: 795 ALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVS 854

Query: 770 LGRWKDA 776
            G W  A
Sbjct: 855 SGMWDFA 861



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 177/709 (24%), Positives = 302/709 (42%), Gaps = 127/709 (17%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCG-DLNSSECTFSGMHCA 137
           +S L + + L + R +H   +K   +   SS+ N  V +Y K    L  +      +   
Sbjct: 87  ISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNR 146

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
              ++  ++     +   ++    FR M + G   D   + + + A + +     GK++H
Sbjct: 147 TVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVH 206

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              I+   E    V V N+LI  YS CGD+ ++   F  M  +DVVSW A+I  +   G 
Sbjct: 207 GFVIRKSVESD--VFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            +EA  + H MQL   V+PD+ +   L+S               G+A            N
Sbjct: 265 XDEAKHIFHLMQL-DGVKPDLISWSALLS---------------GFA-----------RN 297

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
             +D   +    +  E+    + P  +  SWN +ISG            +F  ML+    
Sbjct: 298 GEIDLALE----TLEEMPERGLQPTVN--SWNGIISGCVQNGYLEDALDMFSRMLWYPED 351

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T+ +ILP+C   ++L  GK+IH    K G   N     +++ MY  CG    A  +
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             + + N +T+ WN +I A    G  ++A+   +SM Q+    PD +T   ++S      
Sbjct: 412 FXK-AENKNTAMWNEMIAAYVNEGKVEDALGLLRSM-QKDGWKPDVITYNTILS------ 463

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G + +GL  ++   L   VQ  L                       N+ ++N +IS
Sbjct: 464 ----GHARNGLKTQAXELLSEMVQMGL---------------------KPNVVSFNVLIS 498

Query: 546 AFSQNKAEVRALELFR---------------HLEFEPNEISIVSILSACTQLGVLRHGKQ 590
            F Q+     AL++FR               +L   PN I+I   L AC  L +   GK+
Sbjct: 499 GFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKE 558

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IHG+    GF+ N F+SSAL+DMY+ C               ++  +W+++++ Y  + +
Sbjct: 559 IHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQ 618

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD--EGLQYYNNMLEEYDVRPETEH 693
             EA++LF EM   G++P+  + + L  AC     +    GL  Y    +  +++     
Sbjct: 619 PEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXS 678

Query: 694 HVCIVDMLGRSGKLQEAY-----EFIKNLPIQPKPGVWGAMLSACSHHG 737
              ++DM  + G + +A      E  K++P+      W AM+SA S HG
Sbjct: 679 --ALIDMYAKCGSILDAKSVFDSEVEKDVPL------WNAMISAFSVHG 719



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  S++L+  Y+     +S+  +F+    ++ V+WNA++   + N+     L  F
Sbjct: 567 GFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLF 626

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAK 120
            EM+ EG++  S T +I+  A   +  ++ GR +H  + K  +    +++ +  ++MYAK
Sbjct: 627 LEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAK 686

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  ++  F      D   WN ++S    +         F +M   G   D+++  S 
Sbjct: 687 CGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSL 746

Query: 181 VAASACLGELSYG-KVIHALGIKLG 204
           ++A A  G +  G K  +++ I  G
Sbjct: 747 LSACARDGLVEEGWKYFNSMEISYG 771



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 177/436 (40%), Gaps = 80/436 (18%)

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN--NTIGVNALMHMY 413
           F + L   S    S  +++L  C++   L   + IH   +KL      ++IG N L+ +Y
Sbjct: 71  FVDTLTNSSPTEISDSISLLNRCST---LSEFRQIHARVVKLNALKWKSSIG-NKLVVLY 126

Query: 414 I-NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
             N   L  A  LL  I  N     +  +I +  ++  + E    F+ M  +    PD  
Sbjct: 127 CKNQWSLEDARKLLDEIP-NRTVPAYAALIRSYCRSEQWDELFSXFRLMVYE-GMLPDKY 184

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            +  ++ AC  + L   GK +HG  ++  +  D  V NALI  Y  C D+ S+ +VF S 
Sbjct: 185 LVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSM 244

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
              ++ +W  +ISA+ +                                 G+    K   
Sbjct: 245 QERDVVSWTALISAYMEE--------------------------------GLXDEAK--- 269

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            H+FHL       +     D+ S       WS+++S +  +G+   A+E   EM   G++
Sbjct: 270 -HIFHL-----MQLDGVKPDLIS-------WSALLSGFARNGEIDLALETLEEMPERGLQ 316

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           PT +S   ++S C  +G +++ L  ++ ML      PE  + + I  +L     L+ A  
Sbjct: 317 PTVNSWNGIISGCVQNGYLEDALDMFSRML----WYPEDPNIITIASILPACTGLK-ALR 371

Query: 713 FIKNL-PIQPKPGVWG---------AMLSACSHHGDTKMGKQVAELLF-KLEPENVGYYI 761
             K +  I  K G+ G          M S C  +         AE +F K E +N   + 
Sbjct: 372 LGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSY-------DYAEKVFXKAENKNTAMWN 424

Query: 762 SLSNMYVALGRWKDAV 777
            +   YV  G+ +DA+
Sbjct: 425 EMIAAYVNEGKVEDAL 440


>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
 gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
          Length = 830

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 211/781 (27%), Positives = 383/781 (49%), Gaps = 50/781 (6%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           +++  +F +  ++D   W  M+ A      +      F  M++EG+  D  TLL +++A 
Sbjct: 60  DNARKVFDKMASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINAC 119

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG-MHCADTVSW 142
           ++   L +GR VH     +       +    V MYAKCG ++ +   F   +   + VSW
Sbjct: 120 SESGSLAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSW 179

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
            T++S  +     E+ L  F EM   G   + ++  S +  +AC  +L  G+ +H L  +
Sbjct: 180 TTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVL--NAC--DLDAGRKVHRLIEQ 235

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G +   +V   N+LI MY +CG +E A   F G+  ++++ WN++I G+A   + +   
Sbjct: 236 SGLDSDAFVG--NALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTL 293

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--RSVHGYAIRRLLGYDLLMMNSLM 320
           +   +M L+   + D  T++T++  CA S  L+    +++H  A+   L  D L+  +L+
Sbjct: 294 EFFRKM-LLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALV 352

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS------ 369
              S+      A+++F+++    DL +WN M S     G  ++ + L  Q          
Sbjct: 353 KIKSEQGDRKSAKMVFDSLRA-KDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDK 411

Query: 370 -TLLAILPSCNSPES---LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            T ++IL +C +  S   LE GK  H   L+ G+  + +   AL+ MY  CG L  A  +
Sbjct: 412 VTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLV 471

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            +++  + D   W  ++ A TQ     EA  TF+ + Q +  +PD V L+  + AC NL 
Sbjct: 472 FEKM-ESRDLISWTTMLGAYTQARLLDEASITFRRI-QLEGHTPDRVALIAALGACTNLS 529

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            A   +  H    +     D  V NAL+ +Y  C  ++ A+  F+     ++ +WN +I+
Sbjct: 530 SA---RDFHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIA 586

Query: 546 AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A ++     RA +L R +E +   P+ +++ +++++   L + R GK IH  +   G + 
Sbjct: 587 AHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEI 646

Query: 603 NSFISSALLDMYSNCKSNAA----------------WSSMISAYGYHGKGWEAIELFHEM 646
           +S +++AL++ Y  C   A                 W+S ++AY   G   EA+ +  EM
Sbjct: 647 DSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEM 706

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
              G+ PT  + +S+LS C H+G+ D G   ++++  +YD+ P  EH+ C++D+L R G 
Sbjct: 707 VQQGVAPTAVTFVSVLSVCGHAGVADVGCHLFSSLRWDYDMDPIPEHYGCMIDLLARGGW 766

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L+EA + +K +P  P    W A+LS C      K G  +A  L +   ++   +I++SN+
Sbjct: 767 LEEARQLLKTMPTTPDSIKWMALLSGCHGASVDKTGVFMAMQLLQQNTQSSSAHIAISNL 826

Query: 767 Y 767
           Y
Sbjct: 827 Y 827



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 32/420 (7%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           + + L A L +C++   L  GK +H   +  G   N    N ++HMY+ C  +  A  + 
Sbjct: 10  TVTDLAASLRACHT---LPKGKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVF 66

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            +++ + D   W  ++ A  + GH QEA   F  M   +   PD VTL+ VI+AC     
Sbjct: 67  DKMA-SRDAGLWAPMMAAYARVGHLQEATGLFHRML-DEGVVPDRVTLLTVINACSESGS 124

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTWNCMIS 545
             EG+ +H     S       V  AL+ MY +C  +  A  VF++     N+ +W  M+S
Sbjct: 125 LAEGRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVS 184

Query: 546 AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           A+ +     +AL LF  +  E   PNEI+ VS+L+AC     L  G+++H  +   G   
Sbjct: 185 AYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNACD----LDAGRKVHRLIEQSGLDS 240

Query: 603 NSFISSALLDMYSNCKS--NAA-------------WSSMISAYGYHGKGWEAIELFHEMC 647
           ++F+ +AL+ MY  C S  +A+             W+SMI+ Y    +    +E F +M 
Sbjct: 241 DAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKML 300

Query: 648 NSGIRPTKSSVISLLSACSHSG-LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
             G +  K +++++L AC+ S  L    LQ  +++  E  +  +T     +V +    G 
Sbjct: 301 LDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGD 360

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL--LFKLEPENVGYYISLS 764
            + A     +L  +     W  M SA + HG  +   ++ E   L ++ P+ V +   LS
Sbjct: 361 RKSAKMVFDSLRAK-DLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILS 419


>gi|302753492|ref|XP_002960170.1| hypothetical protein SELMODRAFT_74627 [Selaginella moellendorffii]
 gi|300171109|gb|EFJ37709.1| hypothetical protein SELMODRAFT_74627 [Selaginella moellendorffii]
          Length = 876

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 234/826 (28%), Positives = 400/826 (48%), Gaps = 72/826 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  +      L+  Y  +     + A F     K+VV++NAMITA  +N     G   
Sbjct: 62  RGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQN-----GHSR 116

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNC-----LKQGRVVHCLSIKAGM-IADSSLCNVF 114
            G  +   +    + +  IVS ++ +       L++ R +H L  +AG+  ++  +    
Sbjct: 117 QGLGLFRKLLLLDSKVANIVSFISVIKSCCNERLEECRWIHGLVDEAGLSTSNIVVGTAL 176

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP-EKCLLY--FREMGWSGEQ 171
           +NMYA CG +  +E  F  M   + ++W+ +++   H   P   C ++  FR M  SG  
Sbjct: 177 INMYAVCGSVADAEAVFGSMESRNEITWSALIAA--HAAVPGHACQIWDIFRAMENSGVV 234

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S +++     +LS G++IH    K GY     V V NS+++MY +CGD++ A 
Sbjct: 235 PNEVTFISMLSSCTVAEDLSVGRLIHEAADKYGYGSD--VVVGNSVLNMYGKCGDVDRAR 292

Query: 232 RAFWGMTCKDV--VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           + F  M  K    V+WN+++  +     F  A +L   MQL   V  +  T +  ++ CA
Sbjct: 293 QLFDEMGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSLMQL-EGVIANKVTFLAALNACA 351

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
               +  G++V    +   L  D L+  +L+  + K   L  AE +   I  + D VSWN
Sbjct: 352 GLAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWN 410

Query: 350 SMISGLFKEM---------LYLCSQFSF----STLLAILPSCNSPESLEFGKSIHCWQLK 396
           S+++    +           +L             +A L +C++  +L+ GK +H    +
Sbjct: 411 SIVAAYASQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRE 470

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAI 455
            G  +  +   AL++MY  CG+L+ A  +   +     D   WN +I A TQ+G  +EA+
Sbjct: 471 TGVESTDV-FTALVNMYGKCGELLTAREIFSSMPDEFRDALTWNGLINAHTQHGKPEEAL 529

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             ++ M QQ+   P     V+V++A   L  + EG+ +H    +  + LD+ V   L+ M
Sbjct: 530 SFYRRM-QQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECSLDLDSTVGTLLVNM 588

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISA------------FSQNKAEVRALELFRHL 563
           Y +  D+ +A  +FE   + +  TWN M+ A              Q + E   + LF  +
Sbjct: 589 YAKSGDVDTAWEIFERMQHSDTVTWNSMLGACIQQRPRSSEAPHEQQENEAVVVRLFARM 648

Query: 564 EFEP---NEISIVSILSACTQLGVLRHGKQIHGHV--FHLGFQENSFISSALLDMYSNCK 618
             E    + ++++++LSAC     L HGK++HG V   +L  + ++ + +AL+ MYS C 
Sbjct: 649 LLEGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCG 708

Query: 619 SNA-----------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           S                    W+SMI+A   HG+  +A+EL   M  +G  P K ++  +
Sbjct: 709 SWEVSQAMFHAMGSCHGDLITWNSMITACARHGQALQAVELVRGMEQAGWSPDKVTLTVI 768

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSH+GL+D+  + +  M  EY++ P  +H+  IVD+L R+GKL EA   I+ LP   
Sbjct: 769 LSACSHAGLLDKAYECFQLMRGEYEIDPGPDHYGSIVDLLCRAGKLGEAEALIEKLPDPA 828

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
               W ++L  CS+HGD  +G++ A+ LF ++P +   Y+ LSN Y
Sbjct: 829 SAVTWRSLLGGCSNHGDLVLGRRAADELFGMDPRHHTTYVMLSNTY 874



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 181/720 (25%), Positives = 331/720 (45%), Gaps = 66/720 (9%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           + G   + SL N  +N+Y + G +  +   F G+   + VS+N +++    N +  + L 
Sbjct: 61  RRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQNGHSRQGLG 120

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            FR++     +  N+    +V  S C   L   + IH L  + G   S  V V  +LI+M
Sbjct: 121 LFRKLLLLDSKVANIVSFISVIKSCCNERLEECRWIHGLVDEAGLSTSNIV-VGTALINM 179

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF-ALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           Y+ CG +  AE  F  M  ++ ++W+A+I    A+ G   + +D+   M+    V P+  
Sbjct: 180 YAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVPGHACQIWDIFRAME-NSGVVPNEV 238

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T ++++S C  +  L  GR +H  A +   G D+++ NS+++ Y K   + +A  LF+ +
Sbjct: 239 TFISMLSSCTVAEDLSVGRLIHEAADKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDEM 298

Query: 340 APMNDL-VSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEF 386
              +   V+WNS++    +   ++ +   FS            T LA L +C     +  
Sbjct: 299 GDKHAAPVAWNSLMGAYTQTRNFVLAVELFSLMQLEGVIANKVTFLAALNACAGLAEMTA 358

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-C 445
           GK++    ++ G   + +   AL+ ++  CG L  A S+L  I    D+  WN ++ A  
Sbjct: 359 GKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWNSIVAAYA 417

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +Q GH Q+ ++ F  M       P+    V  ++AC NL    +GK +H L  ++  G++
Sbjct: 418 SQQGHDQDVLRGFHLM-HSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRET--GVE 474

Query: 506 -TRVQNALITMYGRCRDIKSASTVFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRH 562
            T V  AL+ MYG+C ++ +A  +F S  +   +  TWN +I+A +Q+     AL  +R 
Sbjct: 475 STDVFTALVNMYGKCGELLTAREIFSSMPDEFRDALTWNGLINAHTQHGKPEEALSFYRR 534

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           ++ E   P +   VS+L+A   LG    G++IH  V       +S + + L++MY+    
Sbjct: 535 MQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECSLDLDSTVGTLLVNMYAKSGD 594

Query: 618 -------------KSNAAWSSMISA-YGYHGKGWEA-----------IELFHEMCNSGIR 652
                             W+SM+ A      +  EA           + LF  M   GIR
Sbjct: 595 VDTAWEIFERMQHSDTVTWNSMLGACIQQRPRSSEAPHEQQENEAVVVRLFARMLLEGIR 654

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEA 710
             + +++++LSAC+    +  G + +  ++ E ++  E++  +   +V M  R G  + +
Sbjct: 655 VDRVTLLTMLSACASHASLSHGKKLH-GLVSELNLSLESDTGLFNALVTMYSRCGSWEVS 713

Query: 711 YEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-----PENVGYYISLS 764
                 +         W +M++AC+ HG      Q  EL+  +E     P+ V   + LS
Sbjct: 714 QAMFHAMGSCHGDLITWNSMITACARHGQA---LQAVELVRGMEQAGWSPDKVTLTVILS 770



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 199/468 (42%), Gaps = 68/468 (14%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRI 429
            ++ +C+   S    K +     + GF  N    N L+++Y   G   D  AAF  ++  
Sbjct: 38  GLIQACSRSGSPRAAKQLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIE-- 95

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               +   +N +I A  QNGH ++ +  F+ +    +   + V+ ++VI +C N  L  E
Sbjct: 96  --EKNVVSFNAMITAYAQNGHSRQGLGLFRKLLLLDSKVANIVSFISVIKSCCNERLE-E 152

Query: 490 GKSLHGLALKSLMGLDTR---VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
            + +HGL  ++  GL T    V  ALI MY  C  +  A  VF S  + N  TW+ +I+A
Sbjct: 153 CRWIHGLVDEA--GLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAA 210

Query: 547 FSQNKAEV-RALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            +       +  ++FR +E     PNE++ +S+LS+CT    L  G+ IH      G+  
Sbjct: 211 HAAVPGHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGRLIHEAADKYGYGS 270

Query: 603 NSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           +  + +++L+MY  C                  +  AW+S++ AY        A+ELF  
Sbjct: 271 DVVVGNSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSL 330

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---------------------E 684
           M   G+   K + ++ L+AC+    +  G    + ++E                      
Sbjct: 331 MQLEGVIANKVTFLAALNACAGLAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGY 390

Query: 685 YDVRPETEHHVCIVDML-------------GRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
            DV       + + D +             G    +   +  + +  + P+ GV+ A L+
Sbjct: 391 LDVAESVLGEILVPDSVSWNSIVAAYASQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALN 450

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           ACS+ G  K GK V  L+ +   E+   + +L NMY   G    A EI
Sbjct: 451 ACSNLGALKQGKLVHYLVRETGVESTDVFTALVNMYGKCGELLTAREI 498


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 228/803 (28%), Positives = 378/803 (47%), Gaps = 72/803 (8%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
            + +L+T YS      S+  LF  T +  +D+VTWNA+++A  +      G H F  +   
Sbjct: 664  TNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADK--ARDGFHLFRLLRRS 721

Query: 68   GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
             +     TL  +               +H  ++K G+  D  +    VN+YAK G +  +
Sbjct: 722  FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREA 781

Query: 128  ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SLSSAVAAS 184
               F GM   D V WN +M   +      + LL F E   +G + D+V   +L+  V + 
Sbjct: 782  RVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSK 841

Query: 185  ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
              + E    K + A G KL                MY                   DV++
Sbjct: 842  QNVLEWQL-KQLKAYGTKL---------------FMYDDD------------DDGSDVIA 873

Query: 245  WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            WN  +  F   G+  EA D   +M   R V  D  T V ++S+ A    L  G+ +HG  
Sbjct: 874  WNKTLSWFLQRGETWEAVDCFVDMINSR-VACDGLTFVVMLSVVAGLNCLELGKQIHGIV 932

Query: 305  IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
            +R  L   + + N L++ Y K+ S+S+A  +F  +  + DLVSWN+MISG     L  CS
Sbjct: 933  VRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEV-DLVSWNTMISGCALSGLEECS 991

Query: 365  QFSFSTLL------------AILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
               F  LL            ++L +C+S          IH   +K G   ++     L+ 
Sbjct: 992  VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051

Query: 412  MYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            +Y   G +  A  L   ++ +  D + WN ++     +G F +A++ +  M Q+     +
Sbjct: 1052 VYSKSGKMEEAEFLF--VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILM-QESGERAN 1108

Query: 471  SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +TL N   A G L    +GK +  + +K    LD  V + ++ MY +C +++SA  +F 
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168

Query: 531  SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRH 587
               + +   W  MIS   +N  E  AL  + H+     +P+E +  +++ AC+ L  L  
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228

Query: 588  GKQIHGHVFHLGFQENSFISSALLDMYSNC-----------KSN----AAWSSMISAYGY 632
            G+QIH +   L    + F+ ++L+DMY+ C           ++N    A+W++MI     
Sbjct: 1229 GRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQ 1288

Query: 633  HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
            HG   EA++ F EM + G+ P + + I +LSACSHSGLV E  + + +M + Y + PE E
Sbjct: 1289 HGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIE 1348

Query: 693  HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
            H+ C+VD L R+G+++EA + I ++P +    ++  +L+AC    D + GK+VAE L  L
Sbjct: 1349 HYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLAL 1408

Query: 753  EPENVGYYISLSNMYVALGRWKD 775
            EP +   Y+ LSN+Y A  +W++
Sbjct: 1409 EPSDSAAYVLLSNVYAAANQWEN 1431



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 167/701 (23%), Positives = 305/701 (43%), Gaps = 84/701 (11%)

Query: 89   LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH--CADTVSWNTIM 146
            L  G+  H   + +G   D  L N  + MY+KCG L+S+   F        D V+WN I+
Sbjct: 642  LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 147  SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            S   H +        FR +  S   A   +L+            S  + +H   +K+G +
Sbjct: 702  SA--HADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759

Query: 207  DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
               +V+   +L+++Y++ G I  A   F GM  +DVV WN ++  +   G   EA  L  
Sbjct: 760  WDVFVA--GALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFS 817

Query: 267  EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            E      + PD  T      LC  + +++  ++V  + +++L  Y   +           
Sbjct: 818  EFNRT-GLRPDDVT------LCTLARVVKSKQNVLEWQLKQLKAYGTKL----------- 859

Query: 327  NSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTL 371
                    +++     +D+++WN  +S              F +M+     C   +F  +
Sbjct: 860  -------FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVM 912

Query: 372  LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            L+++   N    LE GK IH   ++ G        N L++MY+  G +  A ++  +++ 
Sbjct: 913  LSVVAGLN---CLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE 969

Query: 432  NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL----ELA 487
              D   WN +I  C  +G  + ++  F  +  +    PD  T+ +V+ AC +L     LA
Sbjct: 970  -VDLVSWNTMISGCALSGLEECSVGMFVDLL-RGGLLPDQFTVASVLRACSSLGGGCHLA 1027

Query: 488  FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             +   +H  A+K+ + LD+ V   LI +Y +   ++ A  +F +    +L +WN M+  +
Sbjct: 1028 TQ---IHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGY 1084

Query: 548  SQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
              +    +AL L+  ++      N+I++ +   A   L  L+ GKQI   V   GF  + 
Sbjct: 1085 IVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL 1144

Query: 605  FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            F+ S +LDMY  C                 + AW++MIS    +G+   A+  +H M  S
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204

Query: 650  GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGK 706
             ++P + +  +L+ ACS    +++G Q + N ++    +D    T     +VDM  + G 
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMT----SLVDMYAKCGN 1260

Query: 707  LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
            +++A    K      +   W AM+   + HG+ +   Q  E
Sbjct: 1261 IEDARGLFKRTNTS-RIASWNAMIVGLAQHGNAEEALQFFE 1300



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 3/238 (1%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            RGF   L   + +L  Y      ES+  +F E  + D V W  MI+ CVEN      L  
Sbjct: 1138 RGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFT 1197

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +  M    ++ D  T   +V A + +  L+QGR +H  ++K     D  +    V+MYAK
Sbjct: 1198 YHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAK 1257

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            CG++  +   F   + +   SWN ++ G   +   E+ L +F EM   G   D V+    
Sbjct: 1258 CGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGV 1317

Query: 181  VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            ++A +  G +S   +  +++    G E  P +   + L+   S+ G I  AE+    M
Sbjct: 1318 LSACSHSGLVSEAYENFYSMQKIYGIE--PEIEHYSCLVDALSRAGRIREAEKVISSM 1373



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 155/387 (40%), Gaps = 41/387 (10%)

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S     +IL    +   L  GK  H   L  G   +    N L+ MY  CG L +A  L 
Sbjct: 625 SIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLF 684

Query: 427 QRISHNS-DTSCWNIVIVACTQNGH-----FQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
                 S D   WN ++ A           F+   ++F S T+         TL  V   
Sbjct: 685 DTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRH--------TLAPVFKM 736

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C         +SLHG A+K  +  D  V  AL+ +Y +   I+ A  +F+     ++  W
Sbjct: 737 CLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N M+ A+     E  AL LF         P+++++      CT   V++  KQ   +V  
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL------CTLARVVK-SKQ---NVLE 846

Query: 598 LGFQENSFISSALLDMYSNCKSNA---AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
              ++     + L  MY +    +   AW+  +S +   G+ WEA++ F +M NS +   
Sbjct: 847 WQLKQLKAYGTKLF-MYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACD 905

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEA 710
             + + +LS  +    ++ G Q +  +     VR   +  V    C+++M  ++G +  A
Sbjct: 906 GLTFVVMLSVVAGLNCLELGKQIHGIV-----VRSGLDQVVSVGNCLINMYVKTGSVSRA 960

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHG 737
                 +  +     W  M+S C+  G
Sbjct: 961 RTVFWQMN-EVDLVSWNTMISGCALSG 986


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 233/816 (28%), Positives = 388/816 (47%), Gaps = 119/816 (14%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA-------- 119
           G+R D   L   +SA +++  L  G+  HC + K G+ + +      VNMYA        
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 120 -----------------------KCGDLNSSECTFSGMH---------------CA---- 137
                                  + G    + C F+ M                CA    
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145

Query: 138 -----------------DTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSS 179
                             TV+WN ++SG    +  E +    +++M   G      + +S
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A+A       G+ +HA  ++ G + + +V   +SLI++Y++CG I  A   F     
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVG--SSLINLYAKCGCIGDAILVFDCSGE 263

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREG 297
           K+VV WNA+++G   N    EA  +   M+ +  +E D  T V+++  CA  DS  L  G
Sbjct: 264 KNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRL-GLEADEFTYVSVLGACAHLDSHCL--G 320

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF- 356
           R V    I+  +   L + N+ +D +SK  ++  A+ LFN I    D VSWN+++ GL  
Sbjct: 321 RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLIT-YKDTVSWNALLVGLTH 379

Query: 357 ----KEMLYLC----------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SN 401
               +E +++            + SF+T   ++ +C++  + E GK IHC  +K    SN
Sbjct: 380 NEEDEEAIHMLKGMNLDGVTPDEVSFAT---VINACSNIRATETGKQIHCLAMKHSICSN 436

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           + +G ++L+  Y   GD+ +   +L ++  +S     N++I    QN    EAI  F+ +
Sbjct: 437 HAVG-SSLIDFYSKHGDVESCRKVLAQVDASSIVP-RNVLIAGLVQNNREDEAIDLFQQV 494

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCR 520
            +     P S T  +++S C  L  +  GK +H   LKS  +  DT V  +L+  Y + R
Sbjct: 495 LRD-GLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKAR 553

Query: 521 DIKSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSIL 576
             + A+ +  E   + NL  W  ++S ++QN    ++L  F   R  +  P+E++  SIL
Sbjct: 554 MPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASIL 613

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSN 620
            AC+++  L  GK+IHG +   GF      +SA++DMYS C                +  
Sbjct: 614 KACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDI 673

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             W+SMI  +  +G   EA+ LF +M +S I+  + + + +L AC+H+GL+ EG  Y+++
Sbjct: 674 TLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDS 733

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M + Y + P  +H+ C +D+LGR G LQEA E I  LP +P   +W   L+AC  H D +
Sbjct: 734 MSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEE 793

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
            G+  A+ L +LEP+N   Y+ LSNMY A G W +A
Sbjct: 794 RGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEA 829



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 178/678 (26%), Positives = 316/678 (46%), Gaps = 46/678 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCV---VMGLHFFGEM 64
           T  +++ A + +   E +  L +        V WNA+I+   +   +   V GL  + +M
Sbjct: 134 TCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGL--YKDM 191

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
              G+    +T   ++SA        +GR VH  +++ G+ A+  + +  +N+YAKCG +
Sbjct: 192 RCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCI 251

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F      + V WN +++G + N Y  + +  F  M   G +AD  +  S + A 
Sbjct: 252 GDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGAC 311

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L     G+ +  + IK   + S +V+  N+ + M+S+ G I+ A+  F  +T KD VS
Sbjct: 312 AHLDSHCLGRQVQCVTIKNCMDASLFVA--NATLDMHSKFGAIDDAKTLFNLITYKDTVS 369

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WNA++ G   N + EEA  +L  M L   V PD  +  T+I+ C++      G+ +H  A
Sbjct: 370 WNALLVGLTHNEEDEEAIHMLKGMNL-DGVTPDEVSFATVINACSNIRATETGKQIHCLA 428

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++  +  +  + +SL+DFYSK   +     +  A    + +V  N +I+G          
Sbjct: 429 MKHSICSNHAVGSSLIDFYSKHGDVESCRKVL-AQVDASSIVPRNVLIAGLVQNNREDEA 487

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMH 411
             LF+++L    + S  T  +IL  C    S   GK +HC+ LK GF N+   V  +L+ 
Sbjct: 488 IDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVG 547

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y+       A  LL  +  + +   W  ++    QNG+  +++ +F  M +  +  PD 
Sbjct: 548 TYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRM-RSYDVHPDE 606

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT  +++ AC  +    +GK +HGL +KS  G      +A+I MY +C DI S+   F+ 
Sbjct: 607 VTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKE 666

Query: 532 CYNC-NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
             +  ++  WN MI  F++N     AL LF+ +   + + +E++ + +L AC   G++  
Sbjct: 667 LKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISE 726

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           G+    H F            ++  +Y        ++  I   G  G   EA E+ +E+ 
Sbjct: 727 GR----HYF-----------DSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINEL- 770

Query: 648 NSGIRPTKSSVISLLSAC 665
               RP      + L+AC
Sbjct: 771 --PFRPDGVIWATYLAAC 786



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 276/593 (46%), Gaps = 22/593 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A++   +SL+  Y+       ++ +F  +  K+VV WNAM+   V N   V  +  F
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMF 289

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+  D  T + ++ A   ++    GR V C++IK  M A   + N  ++M++K 
Sbjct: 290 LYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKF 349

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ ++  F+ +   DTVSWN ++ G  HN   E+ +   + M   G   D VS ++ +
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + +     GK IH L +K  +      +V +SLI  YS+ GD+E+  +    +    
Sbjct: 410 NACSNIRATETGKQIHCLAMK--HSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASS 467

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V  N +I G   N + +EA DL  ++ L   ++P   T  +++S C   L    G+ VH
Sbjct: 468 IVPRNVLIAGLVQNNREDEAIDLFQQV-LRDGLKPSSFTFSSILSGCTGLLSSIIGKQVH 526

Query: 302 GYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
            Y ++   L  D  +  SL+  Y K+     A  L   +    +LV W +++SG  +   
Sbjct: 527 CYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGY 586

Query: 361 YLCSQFSF------------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
              S  SF             T  +IL +C+   +L  GK IH   +K GF +     +A
Sbjct: 587 SYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSA 646

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ MY  CGD++++F   + +    D + WN +I+   +NG+  EA+  F+ M   Q  S
Sbjct: 647 IIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKS 706

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
            D VT + V+ AC +  L  EG+     ++  + G+  RV +    I + GR   ++ A 
Sbjct: 707 -DEVTFLGVLIACAHAGLISEGRHYFD-SMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQ 764

Query: 527 TVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILS 577
            V  E  +  +   W   ++A   +K E R     + L E EP   S   +LS
Sbjct: 765 EVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLS 817


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 219/710 (30%), Positives = 355/710 (50%), Gaps = 66/710 (9%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA--DNVSLSS 179
           G L+ +   F  +    TV WNTI+ G + NN+P++ LL++  M  S  Q   D+ + SS
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI------------ 227
            + A A    L  GK +HA  ++     +P   V NSL++MYS C               
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLM--NPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 135

Query: 228 -EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            +   + F  M  + VV+WN +I  +    ++ EA      M +   ++P   + V +  
Sbjct: 136 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQF-SMMMKIGIKPSPVSFVNVFP 194

Query: 287 LCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
             +     +    VHG  ++    Y  DL +++S +  Y++   L  A+ +F+     N 
Sbjct: 195 AFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNT 254

Query: 345 LVSWNSMISGLFKEMLYLCS-QFSFS------------TLLAILPSCNSPESLEFGKSIH 391
            V WN+MIS   +    L   Q  F             TLL+ + + +  +  E  + +H
Sbjct: 255 EV-WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 313

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
            + +K         +NAL+ MY  C  +  +F +   +    D   WN +I A  QNG  
Sbjct: 314 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVVSWNTMISAFVQNGLN 372

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS---LMGLDTRV 508
            EA+  F  M ++Q+   DSVT+  ++SA  +L     GK  HG  L++     G+D+  
Sbjct: 373 DEALMLFYEM-KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY- 430

Query: 509 QNALITMYGRCRDIKSASTVFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
              LI MY +   I++A  VFE  ++   +  TWN M+S ++QN    +A  + R +   
Sbjct: 431 ---LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 487

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS-------- 615
           +  PN +++ SIL AC   G +  GKQ+HG        +N F+++AL+DMYS        
Sbjct: 488 KVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 547

Query: 616 -------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                  N KS   +S+MI  YG HG G  A+ +FH M  SGI+P   +++++LSACS++
Sbjct: 548 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 607

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWG 727
           GLVDEGLQ + +M   Y+++P TEH  C+ DMLGR+G++ +AYEF+  L  +     +WG
Sbjct: 608 GLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWG 667

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPEN--VGYYISLSNMYVALGRWKD 775
           ++L+AC  H   ++GK VA+ L ++E  N   GY++ LSN+Y     W++
Sbjct: 668 SLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWEN 717



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 268/594 (45%), Gaps = 34/594 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--IRFDSTTLLIIVSALTQM 86
           LF        V WN +I   V N      L F+  M      ++ DS T   ++ A    
Sbjct: 26  LFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADT 85

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC------GDLNS--SEC-----TFSG 133
             L  G+ VH   ++  M     + N  +NMY+ C      G + S  S C      F  
Sbjct: 86  RNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDT 145

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           M     V+WNT+++  +      + +  F  M   G +   VS  +   A + LG+    
Sbjct: 146 MRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNA 205

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
            V+H + +KLG E    + V +S I MY++ G +E A++ F     ++   WN +I  F 
Sbjct: 206 NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFV 265

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            N    E   L  +         D  T+++ IS  +          +H + I+ +    +
Sbjct: 266 QNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQV 325

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF 368
            +MN+L+  YS+ NS+  +  +F+ + P  D+VSWN+MIS     GL  E L L  +   
Sbjct: 326 CVMNALIAMYSRCNSIDTSFKIFDNM-PEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK 384

Query: 369 STLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             L+       A+L + +   + + GK  H + L+ G     +  + L+ MY   G + A
Sbjct: 385 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD-SYLIDMYAKSGLIEA 443

Query: 422 AFSLLQR-ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           A ++ ++  SH  D + WN ++   TQNG   +A    + M  Q+   P+ VTL +++ A
Sbjct: 444 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQK-VMPNVVTLASILPA 502

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C        GK LHG ++++ +  +  V  ALI MY +   I  A  VF      ++ T+
Sbjct: 503 CNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTY 562

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
           + MI  + Q+     AL +F  ++    +P+ +++V++LSAC+  G++  G QI
Sbjct: 563 STMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 165/644 (25%), Positives = 285/644 (44%), Gaps = 96/644 (14%)

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATV 281
           Q G +  A + F  +     V WN II G   N   +EA      M+     V+ D  T 
Sbjct: 16  QEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTY 75

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS----------LSK 331
            +++  CAD+  L  G++VH + +R L+    ++ NSL++ YS  +S           S+
Sbjct: 76  SSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 135

Query: 332 AELLFNAIAPMND--LVSWNSMISGLFKEMLYLCSQFSFSTLLAI------------LPS 377
            +L+      M    +V+WN++I+   +   Y  +   FS ++ I             P+
Sbjct: 136 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 195

Query: 378 CNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +S    +    +H   +KLG  + N+   V++ + MY   G L  A  +        +T
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLER-NT 254

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I A  QN    E I+ F    + ++A+ D VTL++ ISA  +L+     + LH 
Sbjct: 255 EVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHA 314

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K++      V NALI MY RC  I ++  +F++    ++ +WN MISAF QN     
Sbjct: 315 FVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDE 374

Query: 556 ALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL LF  ++ +    + +++ ++LSA + L     GKQ HG++   G Q    + S L+D
Sbjct: 375 ALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLID 433

Query: 613 MY-----------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           MY                 S+ +  A W+SM+S Y  +G   +A  +  +M +  + P  
Sbjct: 434 MYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNV 493

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEA- 710
            ++ S+L AC+ SG +D G Q     L  + +R + + +V     ++DM  +SG +  A 
Sbjct: 494 VTLASILPACNPSGYIDWGKQ-----LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAE 548

Query: 711 ---------------------------------YEFIKNLPIQPKPGVWGAMLSACSHHG 737
                                            +  ++   IQP      A+LSACS+ G
Sbjct: 549 NVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAG 608

Query: 738 DTKMGKQVAE---LLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
               G Q+ E    ++ ++P +  ++  +++M    GR   A E
Sbjct: 609 LVDEGLQIFESMRTVYNIQP-STEHFCCVADMLGRAGRVDKAYE 651



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 201/392 (51%), Gaps = 20/392 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           ++  L   +S +  Y+ +   E +  +F     ++   WN MI+A V+N   + G+  F 
Sbjct: 219 YVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFF 278

Query: 63  EMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           + VE E    D  TLL  +SA + +   +    +H   IK   +    + N  + MY++C
Sbjct: 279 QAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC 338

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +++S   F  M   D VSWNT++S  + N   ++ L+ F EM       D+V++++ +
Sbjct: 339 NSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALL 398

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-- 239
           +A++ L     GK  H   ++ G +   +  + + LI MY++ G IEAA+  F       
Sbjct: 399 SAASDLRNPDIGKQTHGYLLRNGIQ---FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHE 455

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D  +WN+++ G+  NG  ++AF +L +M L + V P++ T+ +++  C  S  +  G+ 
Sbjct: 456 RDQATWNSMMSGYTQNGLVDQAFLILRQM-LDQKVMPNVVTLASILPACNPSGYIDWGKQ 514

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG++IR  L  ++ +  +L+D YSKS S++ AE +F+  A    +V++++MI G     
Sbjct: 515 LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSK-ANEKSIVTYSTMILGYGQHG 573

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCN 379
                  +F  M     Q    TL+A+L +C+
Sbjct: 574 MGESALFMFHRMQKSGIQPDAVTLVAVLSACS 605


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 219/710 (30%), Positives = 355/710 (50%), Gaps = 66/710 (9%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA--DNVSLSS 179
           G L+ +   F  +    TV WNTI+ G + NN+P++ LL++  M  S  Q   D+ + SS
Sbjct: 42  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI------------ 227
            + A A    L  GK +HA  ++     +P   V NSL++MYS C               
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLM--NPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159

Query: 228 -EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            +   + F  M  + VV+WN +I  +    ++ EA      M +   ++P   + V +  
Sbjct: 160 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQF-SMMMKIGIKPSPVSFVNVFP 218

Query: 287 LCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
             +     +    VHG  ++    Y  DL +++S +  Y++   L  A+ +F+     N 
Sbjct: 219 AFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNT 278

Query: 345 LVSWNSMISGLFKEMLYLCS-QFSFS------------TLLAILPSCNSPESLEFGKSIH 391
            V WN+MIS   +    L   Q  F             TLL+ + + +  +  E  + +H
Sbjct: 279 EV-WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLH 337

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
            + +K         +NAL+ MY  C  +  +F +   +    D   WN +I A  QNG  
Sbjct: 338 AFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEK-DVVSWNTMISAFVQNGLN 396

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS---LMGLDTRV 508
            EA+  F  M ++Q+   DSVT+  ++SA  +L     GK  HG  L++     G+D+  
Sbjct: 397 DEALMLFYEM-KKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSY- 454

Query: 509 QNALITMYGRCRDIKSASTVFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
              LI MY +   I++A  VFE  ++   +  TWN M+S ++QN    +A  + R +   
Sbjct: 455 ---LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 511

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS-------- 615
           +  PN +++ SIL AC   G +  GKQ+HG        +N F+++AL+DMYS        
Sbjct: 512 KVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA 571

Query: 616 -------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                  N KS   +S+MI  YG HG G  A+ +FH M  SGI+P   +++++LSACS++
Sbjct: 572 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 631

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWG 727
           GLVDEGLQ + +M   Y+++P TEH  C+ DMLGR+G++ +AYEF+  L  +     +WG
Sbjct: 632 GLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWG 691

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPEN--VGYYISLSNMYVALGRWKD 775
           ++L+AC  H   ++GK VA+ L ++E  N   GY++ LSN+Y     W++
Sbjct: 692 SLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWEN 741



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/594 (26%), Positives = 265/594 (44%), Gaps = 34/594 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--IRFDSTTLLIIVSALTQM 86
           LF        V WN +I   V N      L F+  M      ++ DS T   ++ A    
Sbjct: 50  LFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADT 109

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS--------SEC-----TFSG 133
             L  G+ VH   ++  M     + N  +NMY+ C             S C      F  
Sbjct: 110 RNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDT 169

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           M     V+WNT+++  +      + +  F  M   G +   VS  +   A + LG+    
Sbjct: 170 MRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNA 229

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
            V+H + +KLG E    + V +S I MY++ G +E A++ F     ++   WN +I  F 
Sbjct: 230 NVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFV 289

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            N    E   L  +         D  T+++ IS  +          +H + I+ +    +
Sbjct: 290 QNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQV 349

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF 368
            +MN+L+  YS+ NS+  +  +F+ + P  D+VSWN+MIS     GL  E L L  +   
Sbjct: 350 CVMNALIAMYSRCNSIDTSFKIFDNM-PEKDVVSWNTMISAFVQNGLNDEALMLFYEMKK 408

Query: 369 STLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             L+       A+L + +   + + GK  H + L+ G     +  + L+ MY   G + A
Sbjct: 409 QDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD-SYLIDMYAKSGLIEA 467

Query: 422 AFSLLQR-ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           A ++ ++  SH  D + WN ++   TQNG   +A    + M  Q+   P+ VTL +++ A
Sbjct: 468 AQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQK-VMPNVVTLASILPA 526

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C        GK LHG ++++ +  +  V  ALI MY +   I  A  VF      ++ T+
Sbjct: 527 CNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTY 586

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
           + MI  + Q+     AL +F  ++    +P+ +++V++LSAC+  G++  G QI
Sbjct: 587 STMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 640



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 168/665 (25%), Positives = 293/665 (44%), Gaps = 108/665 (16%)

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +P +      +S   Q G +  A + F  +     V WN II G   N   +EA      
Sbjct: 25  NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSN 84

Query: 268 MQLMRSVEPDIA----TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
              M+S  P +     T  +++  CAD+  L  G++VH + +R L+    ++ NSL++ Y
Sbjct: 85  ---MKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMY 141

Query: 324 SKSNS----------LSKAELLFNAIAPMND--LVSWNSMISGLFKEMLYLCSQFSFSTL 371
           S  +S           S+ +L+      M    +V+WN++I+   +   Y  +   FS +
Sbjct: 142 SMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMM 201

Query: 372 LAI------------LPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCG 417
           + I             P+ +S    +    +H   +KLG  + N+   V++ + MY   G
Sbjct: 202 MKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELG 261

Query: 418 DLVAAFSLLQRISHN---SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            L  A    +++  N    +T  WN +I A  QN    E I+ F    + ++A+ D VTL
Sbjct: 262 CLEFA----KKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTL 317

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           ++ ISA  +L+     + LH   +K++      V NALI MY RC  I ++  +F++   
Sbjct: 318 LSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPE 377

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQI 591
            ++ +WN MISAF QN     AL LF  ++ +    + +++ ++LSA + L     GKQ 
Sbjct: 378 KDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQT 437

Query: 592 HGHVFHLGFQENSFISSALLDMY-----------------SNCKSNAAWSSMISAYGYHG 634
           HG++   G Q    + S L+DMY                 S+ +  A W+SM+S Y  +G
Sbjct: 438 HGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNG 496

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              +A  +  +M +  + P   ++ S+L AC+ SG +D G Q     L  + +R + + +
Sbjct: 497 LVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQ-----LHGFSIRNDLDQN 551

Query: 695 V----CIVDMLGRSGKLQEA----------------------------------YEFIKN 716
           V     ++DM  +SG +  A                                  +  ++ 
Sbjct: 552 VFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQK 611

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAE---LLFKLEPENVGYYISLSNMYVALGRW 773
             IQP      A+LSACS+ G    G Q+ E    ++ ++P +  ++  +++M    GR 
Sbjct: 612 SGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQP-STEHFCCVADMLGRAGRV 670

Query: 774 KDAVE 778
             A E
Sbjct: 671 DKAYE 675



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 201/392 (51%), Gaps = 20/392 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           ++  L   +S +  Y+ +   E +  +F     ++   WN MI+A V+N   + G+  F 
Sbjct: 243 YVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFF 302

Query: 63  EMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           + VE E    D  TLL  +SA + +   +    +H   IK   +    + N  + MY++C
Sbjct: 303 QAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRC 362

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +++S   F  M   D VSWNT++S  + N   ++ L+ F EM       D+V++++ +
Sbjct: 363 NSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALL 422

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-- 239
           +A++ L     GK  H   ++ G +   +  + + LI MY++ G IEAA+  F       
Sbjct: 423 SAASDLRNPDIGKQTHGYLLRNGIQ---FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHE 479

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D  +WN+++ G+  NG  ++AF +L +M L + V P++ T+ +++  C  S  +  G+ 
Sbjct: 480 RDQATWNSMMSGYTQNGLVDQAFLILRQM-LDQKVMPNVVTLASILPACNPSGYIDWGKQ 538

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG++IR  L  ++ +  +L+D YSKS S++ AE +F+  A    +V++++MI G     
Sbjct: 539 LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSK-ANEKSIVTYSTMILGYGQHG 597

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCN 379
                  +F  M     Q    TL+A+L +C+
Sbjct: 598 MGESALFMFHRMQKSGIQPDAVTLVAVLSACS 629


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 332/633 (52%), Gaps = 44/633 (6%)

Query: 186 CLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           C  +LS  + +H+  +K G   DS  V+  N L   Y++   I  A + F     + V  
Sbjct: 149 CCSKLSISQ-LHSQCLKAGLVHDSFIVTKLNVL---YARYASIHHAHKLFQETPHRTVYL 204

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSV----EPDIATVVTLISLCADSLLLREGRSV 300
           WNA++  +   G++ E   L  +M  + SV     PD  +V   +  CA    L  G+ +
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 264

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           HG+  +  +  D+ + ++L+D Y+K   ++ A  +F    P  D+V W S+ISG      
Sbjct: 265 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEY-PKPDVVLWTSIISGYEQSGS 323

Query: 356 ------FKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                 F   + +  + S    TL+++  +C    + + G+S+H +  + G  N     N
Sbjct: 324 PELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLAN 383

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+H+Y   G +  A +L + +S + D   W+ ++     NG   + +  F  M  ++  
Sbjct: 384 SLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMVACYADNGAETDVLDLFNEMLDKR-I 441

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+ VT+V+V+ AC  +    EG  +H LA+     ++T V  AL+ MY +C   + A  
Sbjct: 442 KPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVD 501

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           +F      ++  W  + S ++ N     ++ +FR++      P+ I++V IL+  ++LG+
Sbjct: 502 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 561

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L+    +H  V   GF+ N FI ++L+++Y+ C               K    WSS+I+A
Sbjct: 562 LQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 621

Query: 630 YGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           YG+HG+G EA++LF++M N S  +P   + IS+LSACSHSGL+ EG+  ++ M+ +Y ++
Sbjct: 622 YGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 681

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P +EH+  +VD+LGR G+L  A + I N+P+Q  P +WGA+L AC  H + KMG+  A+ 
Sbjct: 682 PNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKN 741

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           LF L+P + GYYI LSN+Y     W  A ++ +
Sbjct: 742 LFSLDPNHAGYYILLSNIYSVDENWHSATKLRR 774



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 252/516 (48%), Gaps = 28/516 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM-SGCLHNN 153
           +H   +KAG++ DS +      +YA+   ++ +   F          WN ++ S C    
Sbjct: 158 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 217

Query: 154 YPEKCLLYFREMGWSG-----EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           + E  L  FR+M         E+ DN S+S A+ + A L +L  GKVIH    K+  +  
Sbjct: 218 WVE-TLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   ++LI +Y++CG +  A + F      DVV W +II G+  +G  E A      M
Sbjct: 277 MFVG--SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 334

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +   V PD  T+V++ S CA     + GRSVHG+  R+ L   L + NSL+  Y K+ S
Sbjct: 335 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGS 394

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
           +  A  LF  ++   D++SW++M++             LF EML    + ++ T++++L 
Sbjct: 395 IKNASNLFREMSD-KDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLR 453

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C    +LE G  IH   +  GF   T    ALM MY+ C     A  L  R+    D  
Sbjct: 454 ACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVI 512

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W ++      NG   E++  F++M       PD++ LV +++    L +  +   LH  
Sbjct: 513 AWAVLFSGYADNGMVHESMWVFRNML-SSGTRPDAIALVKILTTISELGILQQAVCLHAF 571

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K+    +  +  +LI +Y +C  I+ A+ VF+     ++ TW+ +I+A+  +     A
Sbjct: 572 VIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEA 631

Query: 557 LELF----RHLEFEPNEISIVSILSACTQLGVLRHG 588
           L+LF     H + +PN ++ +SILSAC+  G+++ G
Sbjct: 632 LKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 158/594 (26%), Positives = 278/594 (46%), Gaps = 38/594 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEM----- 64
           T L   Y+  +    +  LF ET ++ V  WNA++ + C E   V   L  F +M     
Sbjct: 175 TKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVET-LSLFRQMNNVSS 233

Query: 65  --VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
             +EE  R D+ ++ I + +   +  L  G+V+H    K  +  D  + +  +++Y KCG
Sbjct: 234 VSIEE--RPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCG 291

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            +N +   F      D V W +I+SG   +  PE  L +F  M  S +   D V+L S  
Sbjct: 292 QMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVA 351

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L     G+ +H    + G ++   + + NSL+ +Y + G I+ A   F  M+ KD
Sbjct: 352 SACAQLSNFKLGRSVHGFVKRKGLDNK--LCLANSLLHLYGKTGSIKNASNLFREMSDKD 409

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW+ ++  +A NG   +  DL +EM L + ++P+  TVV+++  CA    L EG  +H
Sbjct: 410 IISWSTMVACYADNGAETDVLDLFNEM-LDKRIKPNWVTVVSVLRACACISNLEEGMKIH 468

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             A+      +  +  +LMD Y K  S  KA  LFN + P  D+++W  + SG       
Sbjct: 469 ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM-PKKDVIAWAVLFSGYADNGMV 527

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F+ ML   ++     L+ IL + +    L+    +H + +K GF NN     +L
Sbjct: 528 HESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 587

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y  C  +  A  + + +++  D   W+ +I A   +G  +EA+K F  M    +  P
Sbjct: 588 IEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKP 646

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLAL-KSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           ++VT ++++SAC +  L  EG ++  + + K  +  ++     ++ + GR  ++  A  V
Sbjct: 647 NNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDV 706

Query: 529 FESC-YNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISIVSILS 577
             +         W  ++ A    QN    EV A  LF     +PN      +LS
Sbjct: 707 INNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLF---SLDPNHAGYYILLS 757



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 159/297 (53%), Gaps = 2/297 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    L  + SLL  Y      +++  LF E  +KD+++W+ M+    +N      L  
Sbjct: 373 KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDL 432

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+++ I+ +  T++ ++ A   ++ L++G  +H L++  G   ++++    ++MY K
Sbjct: 433 FNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMK 492

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C     +   F+ M   D ++W  + SG   N    + +  FR M  SG + D ++L   
Sbjct: 493 CFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKI 552

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   + LG L     +HA  IK G+E++ ++    SLI +Y++C  IE A + F GMT K
Sbjct: 553 LTTISELGILQQAVCLHAFVIKNGFENNQFIGA--SLIEVYAKCSSIEDANKVFKGMTYK 610

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           DVV+W++II  +  +G+ EEA  L ++M      +P+  T ++++S C+ S L++EG
Sbjct: 611 DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEG 667


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 209/721 (28%), Positives = 366/721 (50%), Gaps = 47/721 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF-SGMHCADTVSWNTIMSGCLHNN 153
           ++C + K G+  D+ +C+  V++ AK G L  +   F  G +    V WNT +SG + N 
Sbjct: 57  LYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNG 116

Query: 154 YPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-V 211
                +  F +M   S  + ++ + S  ++A A   EL  G+ +H + ++    DS Y V
Sbjct: 117 EHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLR---RDSEYDV 173

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V  S+++MY +CG + AA   FW M  ++VVSW   I GF        A  LL EM L 
Sbjct: 174 FVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEM-LR 232

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V  +  T  +++  C+ + ++RE   VHG  I+  L  D ++  +L+  Y+ + ++  
Sbjct: 233 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 292

Query: 332 AELLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNS 380
            E +F  +  +++   W++ ISG           L + ML+ C + +     ++  S +S
Sbjct: 293 CEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVDS 352

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E    G+ +H   +K GF +  +  +AL  MY  C DL  ++ + + +    + S W  
Sbjct: 353 SE---LGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS-WTS 408

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I     +GH  EA +  ++M  +   +P+ V+L  ++SAC   E   +GK +HG  L++
Sbjct: 409 MIAGFATHGHSVEAFQVLRNMIAE-GFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA 467

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
             G  T + + L++MY +C+D+++A  +F++    +    + MIS ++ N     AL LF
Sbjct: 468 Y-GRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLF 526

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS-- 615
           + +    F  +     SI+S C  +     GK +HG+   +G   +  +SS+L+ +YS  
Sbjct: 527 QLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKS 586

Query: 616 -------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                        +      W+++I  Y  HG   +A+ LF  M   G++P    ++S+L
Sbjct: 587 GNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVL 646

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC  +GLV+EG +++N+M   Y V P   H+ C+VD+LGRSG+L EA  FI+++P++P 
Sbjct: 647 SACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPN 706

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV--GYYISLSNMYVALGRWKDAVEIG 780
             VW  +L+AC  H D  +G+ V     K+  EN   G + ++SN+    G W+  +EI 
Sbjct: 707 SMVWSTLLAACRVHDDVVLGRFVEN---KIHEENCDSGCFATMSNIRANSGDWEGVMEIR 763

Query: 781 K 781
           K
Sbjct: 764 K 764



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 175/665 (26%), Positives = 287/665 (43%), Gaps = 48/665 (7%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RFDSTTLLIIVSALTQMNCLKQGRVVH 96
           VV WN  I+  V N    +G+  F +MV       +S T   ++SA      L  GR VH
Sbjct: 102 VVCWNTAISGAVRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVH 161

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
            + ++     D  +    VNMY KCG + ++   F  M   + VSW T ++G +    P 
Sbjct: 162 GMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPV 221

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTN 215
             +L   EM  SG   +  + +S + A +    +     +H + IK   Y D     V  
Sbjct: 222 NAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDH---VVKE 278

Query: 216 SLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           +LIS Y+  G ++  E+ F  + T  +   W+A I G + +   + +  LL  M L + +
Sbjct: 279 ALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRH-SVQRSIQLLRRM-LFQCL 336

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+     ++ S    S L   GR +H   I+    + +L+ ++L   YS+ N L  +  
Sbjct: 337 RPNDKCYASVFSSVDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYK 393

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  +    D VSW SMI+G            + + M+      +  +L AIL +CN PE
Sbjct: 394 VFEEMQE-QDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPE 452

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK +H   L+  +   T   + L+ MY  C DL  A  L    +   D    + +I
Sbjct: 453 CLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFD-ATPCKDQIMLSSMI 510

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                NG+ +EA+  F+ M        D     ++IS C N+   F GK LHG A K  +
Sbjct: 511 SGYATNGYSEEALSLFQLML-AAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGI 569

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  V ++L+ +Y +  ++  +  VF+     +L TW  +I  ++Q+ +   AL LF  
Sbjct: 570 LSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDL 629

Query: 563 L---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           +     +P+ + +VS+LSAC + G++  G +      H       +    +L  Y     
Sbjct: 630 MIRCGVKPDTVILVSVLSACGRNGLVEEGFK------HFNSMRTVYGVEPVLHHY----- 678

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
                 M+   G  G+  EA      M    ++P      +LL+AC     V  G    N
Sbjct: 679 ----CCMVDLLGRSGRLVEAKSFIESM---PVKPNSMVWSTLLAACRVHDDVVLGRFVEN 731

Query: 680 NMLEE 684
            + EE
Sbjct: 732 KIHEE 736



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 266/558 (47%), Gaps = 40/558 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TS++  Y       +++  F+    ++VV+W   I   V+    V  +    EM+  G+ 
Sbjct: 177 TSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVA 236

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+ A +Q + +++   VH + IK+ +  D  +    ++ YA  G +   E  
Sbjct: 237 INKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKV 296

Query: 131 FSGMHCADTVS----WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           F  +   DTVS    W+  +SG +  +  ++ +   R M +   + ++   +S V +S  
Sbjct: 297 FQEV---DTVSNRSIWSAFISG-VSRHSVQRSIQLLRRMLFQCLRPNDKCYAS-VFSSVD 351

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
             EL  G+ +H L IK G+     V V ++L +MYS+C D++ + + F  M  +D VSW 
Sbjct: 352 SSEL--GRQLHPLVIKDGFIH--VVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWT 407

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I GFA +G   EAF +L  M +     P+  ++  ++S C     L +G+ VHG+ + 
Sbjct: 408 SMIAGFATHGHSVEAFQVLRNM-IAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVL- 465

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R  G    + + L+  YSK   L  A  LF+A  P  D +  +SMISG            
Sbjct: 466 RAYGRTTSINHCLVSMYSKCKDLQTARKLFDA-TPCKDQIMLSSMISGYATNGYSEEALS 524

Query: 355 LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           LF+ ML   +   +F  S++++I  +   P     GK +H +  K+G  ++    ++L+ 
Sbjct: 525 LFQLMLAAGFHIDRFLCSSIISICANMARPFC---GKLLHGYASKVGILSDLSVSSSLVK 581

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y   G+L  +  +   +    D   W  +I    Q+G  Q+A+  F  M  +    PD+
Sbjct: 582 LYSKSGNLDDSRKVFDELD-VPDLVTWTAIIDGYAQHGSSQDALALFDLMI-RCGVKPDT 639

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF 529
           V LV+V+SACG   L  EG   H  +++++ G++  + +   ++ + GR   +  A +  
Sbjct: 640 VILVSVLSACGRNGLVEEGFK-HFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFI 698

Query: 530 ESC-YNCNLCTWNCMISA 546
           ES     N   W+ +++A
Sbjct: 699 ESMPVKPNSMVWSTLLAA 716



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 184/355 (51%), Gaps = 7/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +  +++L T YS  +  + S  +F E   +D V+W +MI     +   V      
Sbjct: 367 GFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVL 426

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG   +  +L  I+SA     CL +G+ VH   ++A     +S+ +  V+MY+KC
Sbjct: 427 RNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA-YGRTTSINHCLVSMYSKC 485

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL ++   F    C D +  ++++SG   N Y E+ L  F+ M  +G   D    SS +
Sbjct: 486 KDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSII 545

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A +     GK++H    K+G      +SV++SL+ +YS+ G+++ + + F  +   D
Sbjct: 546 SICANMARPFCGKLLHGYASKVGILSD--LSVSSSLVKLYSKSGNLDDSRKVFDELDVPD 603

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+W AIIDG+A +G  ++A  L  ++ +   V+PD   +V+++S C  + L+ EG   H
Sbjct: 604 LVTWTAIIDGYAQHGSSQDALALF-DLMIRCGVKPDTVILVSVLSACGRNGLVEEGFK-H 661

Query: 302 GYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             ++R + G + ++ +   ++D   +S  L +A+    ++    + + W+++++ 
Sbjct: 662 FNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAA 716



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 217/472 (45%), Gaps = 54/472 (11%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVT----WNAMITACVENRCVVMGL 58
           +L H+    +L++ Y+N    +    +F E    D V+    W+A I+  V    V   +
Sbjct: 271 YLDHV-VKEALISTYANAGAVQLCEKVFQEV---DTVSNRSIWSAFISG-VSRHSVQRSI 325

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
                M+ + +R +        S  + ++  + GR +H L IK G I    + +    MY
Sbjct: 326 QLLRRMLFQCLRPNDKCY---ASVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMY 382

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           ++C DL  S   F  M   D VSW ++++G   + +  +     R M   G   ++VSLS
Sbjct: 383 SRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLS 442

Query: 179 SAVAA---SACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + ++A     CL  G+  +G V+ A G           S+ + L+SMYS+C D++ A + 
Sbjct: 443 AILSACNIPECLLKGKEVHGHVLRAYG--------RTTSINHCLVSMYSKCKDLQTARKL 494

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F    CKD +  +++I G+A NG  EEA  L  ++ L      D     ++IS+CA+   
Sbjct: 495 FDATPCKDQIMLSSMISGYATNGYSEEALSLF-QLMLAAGFHIDRFLCSSIISICANMAR 553

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
              G+ +HGYA +  +  DL + +SL+  YSKS +L  +  +F+ +  + DLV+W ++I 
Sbjct: 554 PFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDEL-DVPDLVTWTAIID 612

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF  M+    +     L+++L +C     +E G        K   S 
Sbjct: 613 GYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEG-------FKHFNSM 665

Query: 402 NTI-GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            T+ GV  ++H Y          G LV A S ++ +    ++  W+ ++ AC
Sbjct: 666 RTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAAC 717



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 35/384 (9%)

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           F + ++C   K G S +    + ++ +    G L  A    +   +     CWN  I   
Sbjct: 53  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 112

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            +NG     ++ F  M +     P+S T   V+SAC   E    G+++HG+ L+     D
Sbjct: 113 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYD 172

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-- 563
             V  +++ MY +C  + +A   F      N+ +W   I+ F Q +  V A+ L   +  
Sbjct: 173 VFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLR 232

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
                N+ +  SIL AC+Q  ++R   Q+HG +       +  +  AL+  Y+N      
Sbjct: 233 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 292

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                       + + WS+ IS    H     +I+L   M    +RP      S+ S+  
Sbjct: 293 CEKVFQEVDTVSNRSIWSAFISGVSRHSV-QRSIQLLRRMLFQCLRPNDKCYASVFSSVD 351

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV-----DMLGRSGKLQEAYEFIKNLPIQP 721
            S L   G Q +  ++++  +      HV +V      M  R   L+++Y+  + +  Q 
Sbjct: 352 SSEL---GRQLHPLVIKDGFI------HVVLVASALSTMYSRCNDLKDSYKVFEEMQEQD 402

Query: 722 KPGVWGAMLSACSHHGDTKMGKQV 745
           +   W +M++  + HG +    QV
Sbjct: 403 EVS-WTSMIAGFATHGHSVEAFQV 425


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 194/628 (30%), Positives = 315/628 (50%), Gaps = 39/628 (6%)

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVS 244
           C+ +   G  +HA+ +  G+    +V+  N+L++MY   G ++ A R F    + ++ VS
Sbjct: 19  CVPDAQLGAQVHAMAMATGFGSDVFVA--NALVAMYGGFGFMDDARRVFDEAGSERNAVS 76

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN ++  +  N +  +A  +  EM +   ++P       +++ C  S  +  GR VH   
Sbjct: 77  WNGLMSAYVKNDQCGDAIQVFGEM-VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMV 135

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEM 359
           +R     D+   N+L+D Y K   +  A ++F  + P +D+VSWN++ISG          
Sbjct: 136 VRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM-PDSDVVSWNALISGCVLNGHDHRA 194

Query: 360 LYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMH 411
           + L  Q   S L+       +IL +C    + + G+ IH + +K    S++ IGV  L+ 
Sbjct: 195 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV-GLVD 253

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY     L  A  +   +SH  D   WN +I  C+  G   EA   F  + +++    + 
Sbjct: 254 MYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCSHGGRHDEAFSIFYGL-RKEGLGVNR 311

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            TL  V+ +  +LE A   + +H LA K     D  V N LI  Y +C  +  A  VFE 
Sbjct: 312 TTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 371

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
           C + ++     MI+A SQ      A++LF  +     EP+   + S+L+AC  L     G
Sbjct: 372 CSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG 431

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           KQ+H H+    F  ++F  +AL+  Y+ C               +   +WS+MI     H
Sbjct: 432 KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQH 491

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G G  A+ELF  M + GI P   ++ S+L AC+H+GLVDE  +Y+N+M E + +    EH
Sbjct: 492 GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEH 551

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C++D+LGR+GKL +A E + ++P Q    VWGA+L A   H D ++GK  AE LF LE
Sbjct: 552 YSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILE 611

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           PE  G ++ L+N Y + G W +  ++ K
Sbjct: 612 PEKSGTHVLLANTYASSGMWNEVAKVRK 639



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 269/571 (47%), Gaps = 37/571 (6%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA-DTVSWNTIMSGCL 150
           G  VH +++  G  +D  + N  V MY   G ++ +   F       + VSWN +MS  +
Sbjct: 26  GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N+     +  F EM WSG Q      S  V A      +  G+ +HA+ +++GYE   +
Sbjct: 86  KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            +  N+L+ MY + G ++ A   F  M   DVVSWNA+I G  LNG    A +LL +M+ 
Sbjct: 146 TA--NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK- 202

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + P++  + +++  CA +     GR +HG+ I+     D  +   L+D Y+K++ L 
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 262

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ ++   DL+ WN++ISG            +F  +       + +TL A+L S 
Sbjct: 263 DAMKVFDWMS-HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            S E+    + +H    K+GF  +   VN L+  Y  C  L  A  + +  S + D    
Sbjct: 322 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS-SGDIIAV 380

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I A +Q  H + AIK F  M  ++   PD   L ++++AC +L    +GK +H   +
Sbjct: 381 TSMITALSQCDHGEGAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K     D    NAL+  Y +C  I+ A   F S     + +W+ MI   +Q+    RALE
Sbjct: 440 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 499

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  +  E   PN I++ S+L AC   G++   K+                 +++ +M+ 
Sbjct: 500 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF---------------NSMKEMFG 544

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
             ++   +S MI   G  GK  +A+EL + M
Sbjct: 545 IDRTEEHYSCMIDLLGRAGKLDDAMELVNSM 575



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 273/588 (46%), Gaps = 30/588 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF + +  + +L+  Y    + + +  +F E    ++ V+WN +++A V+N      +  
Sbjct: 37  GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 96

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FGEMV  GI+        +V+A T    +  GR VH + ++ G   D    N  V+MY K
Sbjct: 97  FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 156

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +   F  M  +D VSWN ++SGC+ N +  + +    +M  SG   +   LSS 
Sbjct: 157 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 216

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A  G    G+ IH   IK   +   Y+ V   L+ MY++   ++ A + F  M+ +
Sbjct: 217 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGV--GLVDMYAKNHFLDDAMKVFDWMSHR 274

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++ WNA+I G +  G+ +EAF + + ++    +  +  T+  ++   A        R V
Sbjct: 275 DLILWNALISGCSHGGRHDEAFSIFYGLR-KEGLGVNRTTLAAVLKSTASLEAASATRQV 333

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H  A +    +D  ++N L+D Y K + LS A  +F   +   D+++  SMI+       
Sbjct: 334 HALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS-GDIIAVTSMITALSQCDH 392

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EML    +     L ++L +C S  + E GK +H   +K  F ++    NA
Sbjct: 393 GEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNA 452

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L++ Y  CG   D   AFS L           W+ +I    Q+GH + A++ F  M   +
Sbjct: 453 LVYTYAKCGSIEDAELAFSSLPE----RGVVSWSAMIGGLAQHGHGKRALELFGRMV-DE 507

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
             +P+ +T+ +V+ AC +  L  E K     ++K + G+D   ++   +I + GR   + 
Sbjct: 508 GINPNHITMTSVLCACNHAGLVDEAKRYFN-SMKEMFGIDRTEEHYSCMIDLLGRAGKLD 566

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
            A  +  S  +  N   W  ++ A   +K  E+  L   +    EP +
Sbjct: 567 DAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 614



 Score = 40.8 bits (94), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 2/158 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F++      +L+  Y+     E +   F     + VV+W+AMI    ++      L  
Sbjct: 441 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 500

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FG MV+EGI  +  T+  ++ A      + +  R  + +    G+       +  +++  
Sbjct: 501 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 560

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           + G L+ + E   S    A+   W  ++     +  PE
Sbjct: 561 RAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 598


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 215/756 (28%), Positives = 369/756 (48%), Gaps = 51/756 (6%)

Query: 67  EGIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           + +R  ST+ L++ + L +       L  GR VH   +   +  ++ L  +   MYA+C 
Sbjct: 40  DKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCR 99

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
             +++   F  M       WN +M   L  + P   L  +R M     Q        A+ 
Sbjct: 100 CFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV 159

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A   + +L+ G+ IH    ++        S+ ++L++MY+QCG I+ A  AF        
Sbjct: 160 ACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
             WNAI+   A  G    A +L  +M+  +  +   A  +   +       LR G  +H 
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGH---LRGGIQIHD 273

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
                + G  +L++N+L+  Y +   L +A  +F A  P  ++VSW SMI+ + +   Y 
Sbjct: 274 KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVF-ADMPHRNVVSWTSMIAAVAQTGHYS 332

Query: 363 CSQFSFSTLLA--ILPSCNSPES-------------LEFGKSIHCWQLKLGFSNNTIGVN 407
            S   F  ++A  I P+  +  S             L+ G+ IH      G   + I  N
Sbjct: 333 FSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN 392

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +L++MY   G L  A  +   I  NS T   +  +I A   NGH ++A++ F+ MT +  
Sbjct: 393 SLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTAR-G 451

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR---VQNALITMYGRCRDIK 523
            +P+ +T   V++AC  +     G  +H   ++S  GLD+      N+L+ MY +C D+ 
Sbjct: 452 VAPNEITFATVLAACVAIGDLASGAWIHERMIES--GLDSSDPFAYNSLVDMYAKCGDLG 509

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLE--FEPNEISIVSILSACT 580
            A+ VFE+    +L  W  +I+A  Q+     AL+L+ R L+    P+  ++ ++L AC 
Sbjct: 510 FAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACA 569

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSS 625
            LG L  G++IH        ++++   +AL  MY+ C S                A W+S
Sbjct: 570 NLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTS 629

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           M++A+   G    A+EL+ EM + G+RP + + I +L +CS +GLV EG ++++++  +Y
Sbjct: 630 MLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDY 689

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
             +P  EH  C+VD+LGR+GKL++A E + ++P  P    W ++LS+C  H D ++G + 
Sbjct: 690 GSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRA 749

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AE L +L+PE+   +++LS +Y A GR  D  EI +
Sbjct: 750 AECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKR 785



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 212/453 (46%), Gaps = 23/453 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ Y      + +L +F +  +++VV+W +MI A  +       +  F  M+ EGI  
Sbjct: 289 ALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINP 348

Query: 72  DSTTLLIIVSALTQMN---CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  T   +VSA+  +     L +GR +H     +G+ AD  + N  +NMYA+ G L  + 
Sbjct: 349 NEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAR 408

Query: 129 CTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
             F  +  +    VS+ T++S   HN +P + L  FREM   G   + ++ ++ +AA   
Sbjct: 409 EVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVA 468

Query: 187 LGELSYGKVIHALGIKLGYEDS-PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           +G+L+ G  IH   I+ G + S P+    NSL+ MY++CGD+  A R F  M  KD+V+W
Sbjct: 469 IGDLASGAWIHERMIESGLDSSDPF--AYNSLVDMYAKCGDLGFAARVFETMKTKDLVAW 526

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             II     +G    A DL   M L   + PDIAT+ TL+  CA+   L  G  +H  A+
Sbjct: 527 TTIIAANVQSGNNRAALDLYDRM-LQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQAL 585

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           R  L  D    N+L   Y+K  SL KA  L+      +D+ +W SM++            
Sbjct: 586 RSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRG-SDVATWTSMLAAHSQQGLASVAL 644

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHM 412
            L+ EM     + +  T + +L SC+    +  G+   H      G   +      ++ +
Sbjct: 645 ELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDV 704

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
               G L  A  LL  +    D   W  ++ +C
Sbjct: 705 LGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 249/588 (42%), Gaps = 58/588 (9%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+T Y+     + ++A F +        WNA+++A          +  F +M  E  +
Sbjct: 189 SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQHQ 246

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSEC 129
               +  I + A      L+ G  +H   I++ +     L  N  ++MY +CG L+ +  
Sbjct: 247 CSDRSCAIALGACAAAGHLRGGIQIHD-KIQSEIHGTRVLVLNALISMYVRCGKLDEALR 305

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F+ M   + VSW ++++      +    +  F  M   G   +  + +S V+A A LG 
Sbjct: 306 VFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGR 365

Query: 190 ---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--TCKDVVS 244
              L  G+ IH+     G +  P V   NSLI+MY++ G +  A   F  +    K VVS
Sbjct: 366 DAILDRGRKIHSQITASGIDADPIVQ--NSLINMYARSGLLAEAREVFDSILENSKTVVS 423

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           +  +I  +A NG   +A ++  EM   R V P+  T  T+++ C     L  G  +H   
Sbjct: 424 FTTMISAYAHNGHPRQALEIFREMT-ARGVAPNEITFATVLAACVAIGDLASGAWIHERM 482

Query: 305 IRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           I   L   D    NSL+D Y+K   L  A  +F  +    DLV+W ++I+          
Sbjct: 483 IESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM-KTKDLVAWTTIIAANVQSGNNRA 541

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              L+  ML        +TL  +L +C +   L  G+ IH   L+     +    NAL  
Sbjct: 542 ALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAA 601

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  A  L +R    SD + W  ++ A +Q G    A++ +  M + +   P+ 
Sbjct: 602 MYAKCGSLEKATRLYRRC-RGSDVATWTSMLAAHSQQGLASVALELYAEM-ESEGVRPNE 659

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT + V+ +C    L  EG+                  +++ + YG     + ++  F  
Sbjct: 660 VTFIPVLISCSQAGLVAEGREFF---------------HSITSDYGS----QPSAEHF-- 698

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                     CM+    +      A EL   + F P+EI+  S+LS+C
Sbjct: 699 ---------GCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 4/250 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+       +  +F     KD+V W  +I A V++      L  +  M++ GI  
Sbjct: 497 SLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHP 556

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL  ++ A   +  L  G  +H  ++++ +  D+   N    MYAKCG L  +   +
Sbjct: 557 DIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLY 616

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                +D  +W ++++           L  + EM   G + + V+    + + +  G ++
Sbjct: 617 RRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVA 676

Query: 192 YGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAII 249
            G+   H+  I   Y   P       ++ +  + G +  AE     M    D ++W +++
Sbjct: 677 EGREFFHS--ITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLL 734

Query: 250 DGFALNGKFE 259
               L+   E
Sbjct: 735 SSCKLHTDAE 744


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 211/756 (27%), Positives = 370/756 (48%), Gaps = 51/756 (6%)

Query: 67  EGIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           + +R  ST+ L++ + L +       L  GR VH   +   +  ++ L  +   MYA+C 
Sbjct: 40  DKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCR 99

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
             +++   F  M       WN +M   L  + P   L  +R M     Q        A+ 
Sbjct: 100 CFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIV 159

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A   + +L+ G+ IH    ++        S+ ++L++MY+QCG I+ A  AF        
Sbjct: 160 ACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGT 216

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
             WNAI+   A  G    A +L  +M+  +  +   A  +   +       LR G  +H 
Sbjct: 217 APWNAIMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGH---LRGGIQIHD 273

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
                + G  +L++N+L+  Y +   L +A  +F A  P  ++VSW SMI+         
Sbjct: 274 KIQSEIHGTRVLVLNALISMYVRCGKLDEALRVF-ADMPHRNVVSWTSMIAAVAQSGHYS 332

Query: 355 ----LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
               LF  M+      ++ +++++++ +        L+ G+ IH      G   + I  N
Sbjct: 333 FAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQN 392

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +L++MY   G L  A  +   I  NS T   +  +I A   NGH ++A++ F+ MT +  
Sbjct: 393 SLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTAR-G 451

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR---VQNALITMYGRCRDIK 523
            +P+ +T   V++AC  +     G  +H   ++S  GLD+      N+L+ MY +C D+ 
Sbjct: 452 VAPNEITFATVLAACVAIGDLASGAWIHERMIES--GLDSSDPFAYNSLVDMYAKCGDLG 509

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLE--FEPNEISIVSILSACT 580
            A+ VFE+    +L  W  +I+A  Q+     AL+L+ R L+    P+  ++ ++L AC 
Sbjct: 510 FAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACA 569

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSS 625
            LG L  G++IH        ++++   +AL  MY+ C S                A W+S
Sbjct: 570 NLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTS 629

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           M++A+   G    A+EL+ EM + G+RP + + I +L +CS +GLV EG ++++++  +Y
Sbjct: 630 MLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDY 689

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
             +P  EH  C+VD+LGR+GKL++A E + ++P  P    W ++LS+C  H D ++G + 
Sbjct: 690 GSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRA 749

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AE L +L+PE+   +++LS +Y A GR  D  EI +
Sbjct: 750 AECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKR 785



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 213/453 (47%), Gaps = 23/453 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ Y      + +L +F +  +++VV+W +MI A  ++      +  F  M+ EGI  
Sbjct: 289 ALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINP 348

Query: 72  DSTTLLIIVSALTQMN---CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  T   +VSA+  +     L +GR +H     +G+ AD  + N  +NMYA+ G L  + 
Sbjct: 349 NEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAR 408

Query: 129 CTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
             F  +  +    VS+ T+++   HN +P + L  FREM   G   + ++ ++ +AA   
Sbjct: 409 EVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVA 468

Query: 187 LGELSYGKVIHALGIKLGYEDS-PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           +G+L+ G  IH   I+ G + S P+    NSL+ MY++CGD+  A R F  M  KD+V+W
Sbjct: 469 IGDLASGAWIHERMIESGLDSSDPF--AYNSLVDMYAKCGDLGFAARVFETMKTKDLVAW 526

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             II     +G    A DL   M L   + PDIAT+ TL+  CA+   L  G  +H  A+
Sbjct: 527 TTIIAANVQSGNNRAALDLYDRM-LQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQAL 585

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           R  L  D    N+L   Y+K  SL KA  L+      +D+ +W SM++            
Sbjct: 586 RSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRG-SDVATWTSMLAAHSQQGLASVAL 644

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHM 412
            L+ EM     + +  T + +L SC+    +  G+   H      G   +      ++ +
Sbjct: 645 ELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDV 704

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
               G L  A  LL  +    D   W  ++ +C
Sbjct: 705 LGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 250/588 (42%), Gaps = 58/588 (9%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+T Y+     + ++A F +        WNA+++A          +  F +M  E  +
Sbjct: 189 SALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQHQ 246

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSEC 129
               +  I + A      L+ G  +H   I++ +     L  N  ++MY +CG L+ +  
Sbjct: 247 CSDRSCAIALGACAAAGHLRGGIQIHD-KIQSEIHGTRVLVLNALISMYVRCGKLDEALR 305

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F+ M   + VSW ++++    + +    +  F  M   G   +  + +S V+A A LG 
Sbjct: 306 VFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGR 365

Query: 190 ---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--TCKDVVS 244
              L  G+ IH+     G +  P V   NSLI+MY++ G +  A   F  +    K VVS
Sbjct: 366 DAILDRGRKIHSQITASGIDADPIVQ--NSLINMYARSGLLAEAREVFDSILENSKTVVS 423

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           +  +I  +A NG   +A ++  EM   R V P+  T  T+++ C     L  G  +H   
Sbjct: 424 FTTMIAAYAHNGHPRQALEIFREMT-ARGVAPNEITFATVLAACVAIGDLASGAWIHERM 482

Query: 305 IRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           I   L   D    NSL+D Y+K   L  A  +F  +    DLV+W ++I+          
Sbjct: 483 IESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM-KTKDLVAWTTIIAANVQSGNNRA 541

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              L+  ML        +TL  +L +C +   L  G+ IH   L+     +    NAL  
Sbjct: 542 ALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAA 601

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  A  L +R    SD + W  ++ A +Q G    A++ +  M + +   P+ 
Sbjct: 602 MYAKCGSLEKATRLYRRC-RGSDVATWTSMLAAHSQQGLASVALELYAEM-ESEGVRPNE 659

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT + V+ +C    L  EG+                  +++ + YG     + ++  F  
Sbjct: 660 VTFIPVLISCSQAGLVAEGREFF---------------HSITSDYGS----QPSAEHF-- 698

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                     CM+    +      A EL   + F P+EI+  S+LS+C
Sbjct: 699 ---------GCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 4/250 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+       +  +F     KD+V W  +I A V++      L  +  M++ GI  
Sbjct: 497 SLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHP 556

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL  ++ A   +  L  G  +H  ++++ +  D+   N    MYAKCG L  +   +
Sbjct: 557 DIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLY 616

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                +D  +W ++++           L  + EM   G + + V+    + + +  G ++
Sbjct: 617 RRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVA 676

Query: 192 YGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAII 249
            G+   H+  I   Y   P       ++ +  + G +  AE     M    D ++W +++
Sbjct: 677 EGREFFHS--ITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLL 734

Query: 250 DGFALNGKFE 259
               L+   E
Sbjct: 735 SSCKLHTDAE 744


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/729 (28%), Positives = 357/729 (48%), Gaps = 38/729 (5%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           +LL  + +      ++ G  +H   IK G   D  L N  +++Y KC  +  +   F  M
Sbjct: 17  SLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEM 76

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
            C D  SW  +MS        E+ L  F  M  SGE  +  +LS+A+ + + L E ++G 
Sbjct: 77  PCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGT 136

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
              AL  K G++ +P +   ++LI  YS+CG  + A R F  M   D+VSW  ++  F  
Sbjct: 137 RFQALVTKSGFDSNPVLG--SALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDL 313
            G + +A  L H M +   V P+  T V L  L A S L L  G+ VH + +   +  +L
Sbjct: 195 AGSWSQALQLYHRM-IQTGVAPNEFTFVKL--LAASSFLGLNYGKLVHAHLMMWRIELNL 251

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSF 368
           ++  +L+D Y K  S+  A +  + +    D+  W ++ISG      F+E +    +   
Sbjct: 252 VLKTALVDMYCKCQSIEDA-VKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMET 310

Query: 369 S-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           S       T   IL +C+S  +L+ GK IH   +  G  N+    N+L+ MY+ C +++ 
Sbjct: 311 SGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIE 370

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
                 R   + +   W  +I   +++G  +E+IK F +M Q     P+S TL  ++ AC
Sbjct: 371 DAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM-QGVGVRPNSFTLSTILGAC 429

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
           G ++   + + LHG  +K+    D  V NAL+  Y     +  A  V     + ++ T+ 
Sbjct: 430 GTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYT 489

Query: 542 CMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            + +  +Q      AL +  H+   +   +  S+ S LSA   + ++  GKQ+H +    
Sbjct: 490 SLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKS 549

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
           G      +S+ L+D+Y  C                   +W+ +I     +G    A+  F
Sbjct: 550 GLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAF 609

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            +M  +G+ P + + + +L ACSH GLVD GL Y+ +M E++ +RP+ +H+VC+VD+LGR
Sbjct: 610 EDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGR 669

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G+L+EA   I+ +P +P   ++  +L AC  HG+  +G+ +A    +L+P +  +Y+ L
Sbjct: 670 AGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLL 729

Query: 764 SNMYVALGR 772
           +N+Y   GR
Sbjct: 730 ANLYDDSGR 738



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/503 (21%), Positives = 217/503 (43%), Gaps = 19/503 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L   T+L+  Y      E ++ +   T   DV  W A+I+   ++      +  F EM 
Sbjct: 250 NLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEME 309

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL- 124
             G+  ++ T   I++A + +  L  G+ +H   + AG+  D S+ N  V+MY KC ++ 
Sbjct: 310 TSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMI 369

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F G+   + +SW ++++G   +   E+ +  F  M   G + ++ +LS+ + A 
Sbjct: 370 EDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
             +  L+  + +H   IK   ++   V V N+L+  Y+  G ++ A      M  +DV++
Sbjct: 430 GTIKSLTQTRKLHGYIIKNNADND--VVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVIT 487

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           + ++       G  E A +++  M     V  D  ++ + +S  A   ++  G+ +H Y+
Sbjct: 488 YTSLATRINQTGNHEMALNIITHMN-KDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYS 546

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------- 355
           ++  LG  + + N L+D Y K   +  A   F  I    D VSWN +I GL         
Sbjct: 547 VKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITE-PDAVSWNGLIFGLASNGHVSSA 605

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
              F++M     +    T L +L +C+    ++ G       + K G          L+ 
Sbjct: 606 LSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVD 665

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD- 470
           +    G L  A ++++ +    D   +  ++ AC  +G+        +   +   + P  
Sbjct: 666 LLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAF 725

Query: 471 SVTLVNVISACGNLELAFEGKSL 493
            V L N+    G  EL  + + +
Sbjct: 726 YVLLANLYDDSGRSELGEKTRRM 748



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 17/339 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVS-YFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G    +    SL+  Y   S   E ++  F    + +V++W ++I    E+      +  
Sbjct: 347 GLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKV 406

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FG M   G+R +S TL  I+ A   +  L Q R +H   IK     D  + N  V+ YA 
Sbjct: 407 FGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAG 466

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G ++ +    S M   D +++ ++ +        E  L     M     + D  SL+S 
Sbjct: 467 LGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASF 526

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A+A +  +  GK +H   +K G     ++SV+N L+ +Y +CG I  A R+F  +T  
Sbjct: 527 LSAAAGIPIMETGKQLHCYSVKSGL--GSWISVSNGLVDLYGKCGCIHDAHRSFLEITEP 584

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--- 297
           D VSWN +I G A NG    A     +M+L   VEPD  T + ++  C+   L+  G   
Sbjct: 585 DAVSWNGLIFGLASNGHVSSALSAFEDMRLA-GVEPDQITCLLVLYACSHGGLVDMGLDY 643

Query: 298 ----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
               R  HG  IR  L + +     L+D   ++  L +A
Sbjct: 644 FQSMREKHG--IRPQLDHYV----CLVDLLGRAGRLEEA 676



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 136/300 (45%), Gaps = 11/300 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+ AY+ +   + +  +     ++DV+T+ ++ T   +     M L+    M ++ +R 
Sbjct: 459 ALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRM 518

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  +L   +SA   +  ++ G+ +HC S+K+G+ +  S+ N  V++Y KCG ++ +  +F
Sbjct: 519 DGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSF 578

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSWN ++ G   N +    L  F +M  +G + D ++    + A +  G + 
Sbjct: 579 LEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVD 638

Query: 192 YG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
            G     ++  K G    P +     L+ +  + G +E A      M  K D + +  ++
Sbjct: 639 MGLDYFQSMREKHGIR--PQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLL 696

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
               L+G       +  +   +   +P  A  V L +L  DS     GRS  G   RR++
Sbjct: 697 GACKLHGNIPLGEHMARQGLELDPSDP--AFYVLLANLYDDS-----GRSELGEKTRRMM 749


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 274/484 (56%), Gaps = 33/484 (6%)

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFSTLLA-------IL 375
           ++  A  +F+ + P  D+  WN++I G       +E L L S    + L         ++
Sbjct: 77  TMDYARKMFDQM-PKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVV 135

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            SC    +L  GK +HC  +K GF ++    ++L+ MY   G+ +    +   +   +  
Sbjct: 136 RSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIV 195

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S W  VI    QN +F+E +  F+ M       P++VTLV+V+ AC  LE    GK +HG
Sbjct: 196 S-WTAVIAGYVQNRYFKEGLGVFREMVGS-GTQPNAVTLVSVLPACAGLEFLNLGKLIHG 253

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K  +  D  + NALI +YG+C ++++A ++F+     NL +WN MI+A+ QN A   
Sbjct: 254 YGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGAN 313

Query: 556 ALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A++LFR ++ E    + I++VS++SAC  LG L  G+ +H  V   G + N  I++AL+D
Sbjct: 314 AVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALID 373

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+ C               +S  +W+SMI A   HG G +A++LF  M + G++P   +
Sbjct: 374 MYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFT 433

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
             ++ +AC HSGLV+EG +++ +M+ +Y + P  EH  C+VD+LGR+G L EAYEFI  +
Sbjct: 434 FAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKM 493

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   VWGA+L +C  H + ++ + VAE LF L+P+ V +Y+ +SN+Y   GRW+DA 
Sbjct: 494 PVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAA 553

Query: 778 EIGK 781
            + K
Sbjct: 554 RLRK 557



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 217/441 (49%), Gaps = 21/441 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV  WN +I    +       L  +  M   G+  D+ T   +V +   ++ 
Sbjct: 84  MFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSA 143

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L++G+ VHC  +K G  +D  + +  V MY++ G+    E  F  M   + VSW  +++G
Sbjct: 144 LREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAG 203

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + N Y ++ L  FREM  SG Q + V+L S + A A L  L+ GK+IH  GIKLG +  
Sbjct: 204 YVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVD-- 261

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P VS+TN+LI++Y +CG++E A   F GM  +++VSWNA+I  +  N     A  L   M
Sbjct: 262 PDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRM 321

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    V+ D  T+V++IS CA    L  GR +H    R+ L  ++ + N+L+D Y+K  +
Sbjct: 322 Q-AEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGN 380

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +  A  +F  + P   +VSW SMI              LF  M     + +  T  A+  
Sbjct: 381 IDLAREVFERL-PCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFT 439

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVN---ALMHMYINCGDLVAAFSLLQRISHNS 433
           +C     +E G+  H   +   +S    GV     ++ +    G L+ A+  + ++    
Sbjct: 440 ACRHSGLVEEGRK-HFESMMRDYSIMP-GVEHCACMVDLLGRAGSLMEAYEFIDKMPVEP 497

Query: 434 DTSCWNIVIVACTQNGHFQEA 454
           D S W  ++ +C  + + + A
Sbjct: 498 DVSVWGALLGSCRIHSNLELA 518



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 234/491 (47%), Gaps = 39/491 (7%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHAL +  G   +  +S T  +I+       ++ A + F  M  +DV  WN +I G+A  
Sbjct: 48  IHALVVTNGCGQNLLLS-TKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  EEA  L   M     + PD  T   ++  CA    LREG+ VH   ++     D+ +
Sbjct: 107 GPCEEALALYSNMH-GAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFV 165

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLC 363
            +SL+  YS+S      EL+F  +   N +VSW ++I+            G+F+EM+   
Sbjct: 166 QSSLVAMYSQSGETLGMELVFGEMVVRN-IVSWTAVIAGYVQNRYFKEGLGVFREMVGSG 224

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           +Q +  TL+++LP+C   E L  GK IH + +KLG   +    NAL+ +Y  CG++  A 
Sbjct: 225 TQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETAR 284

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           SL   +   +  S WN +I A  QN     A+K F+ M Q +    D +T+V+VISAC +
Sbjct: 285 SLFDGMVVQNLVS-WNAMIAAYEQNNAGANAVKLFRRM-QAEKVDFDYITMVSVISACAS 342

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     G+ +H L  +  + ++  + NALI MY +C +I  A  VFE     ++ +W  M
Sbjct: 343 LGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSM 402

Query: 544 ISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I A + +     AL+LF  ++ E   PN  +  ++ +AC   G++  G++      H   
Sbjct: 403 IGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK------HF-- 454

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
                   +++  YS        + M+   G  G   EA E   +M    + P  S   +
Sbjct: 455 -------ESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKM---PVEPDVSVWGA 504

Query: 661 LLSACS-HSGL 670
           LL +C  HS L
Sbjct: 505 LLGSCRIHSNL 515



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 182/357 (50%), Gaps = 14/357 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +   +SL+  YS          +F E   +++V+W A+I   V+NR    GL  F
Sbjct: 158 GFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVF 217

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EMV  G + ++ TL+ ++ A   +  L  G+++H   IK G+  D SL N  + +Y KC
Sbjct: 218 REMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKC 277

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ ++   F GM   + VSWN +++    NN     +  FR M       D +++ S +
Sbjct: 278 GNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVI 337

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG L+ G+ +H L  + G E +  VS+TN+LI MY++CG+I+ A   F  + C+ 
Sbjct: 338 SACASLGALNTGRWMHELVKRKGLEIN--VSITNALIDMYAKCGNIDLAREVFERLPCRS 395

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW ++I   A +G  E+A  L   M+    V+P+  T   + + C  S L+ EGR  H
Sbjct: 396 VVSWTSMIGACASHGHGEDALKLFSRMK-DEGVKPNSFTFAAVFTACRHSGLVEEGRK-H 453

Query: 302 GYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             ++ R    D  +M        ++D   ++ SL +A    + +    D+  W +++
Sbjct: 454 FESMMR----DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 11/160 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G   ++  + +L+  Y+     + +  +F     + VV+W +MI AC  +      L  
Sbjct: 359 KGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKL 418

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR-----VVHCLSIKAGMIADSSLCNVFV 115
           F  M +EG++ +S T   + +A      +++GR     ++   SI  G+      C   V
Sbjct: 419 FSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGV----EHCACMV 474

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
           ++  + G L  +      M     VS W  ++  C +H+N
Sbjct: 475 DLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSN 514


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 220/727 (30%), Positives = 360/727 (49%), Gaps = 49/727 (6%)

Query: 93  RVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFS--GMHCADTVSWNTIMSGC 149
           R  H  S+ +G +  S  L    +  YA   D+ S+        +       WN++    
Sbjct: 22  RRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRAL 81

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAV-----AASACLGELSYGKVIHALGIKLG 204
                P + L  +  M  SG + D+ +   A+     A  A     + G  +HA  ++ G
Sbjct: 82  ASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRG 141

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
              +  V   N+L++ Y+  G    A R F  M  +D+VSWN+++     NG  E+A   
Sbjct: 142 LLLAD-VFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRA 200

Query: 265 LHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +  + +MRS  P ++A++V+++  C        G SVHG  ++  L   + + N+L+D Y
Sbjct: 201 V--VGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMY 258

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------EMLYLCSQFSFS----T 370
            K   L  +  +FN +   N+ VSWNS + G F          EM  + S+   +    T
Sbjct: 259 GKFGDLESSMRVFNGMQEKNE-VSWNSAL-GCFAHAGFHEDVLEMFRVMSEHEVTPGSVT 316

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L ++LP+         GK +H + ++    ++    N+LM MY   G L  A ++ + I 
Sbjct: 317 LSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIE 376

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             +  S WN +I    QNG   EA      M Q+    P+S TLVN++ AC  +     G
Sbjct: 377 GRNVVS-WNAMIANLAQNGAETEAFSLVIEM-QKNGECPNSFTLVNLLPACSRVASVKMG 434

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H  ++   +  D  V NALI +Y +C  +  A  +F+     ++ ++N +I  +SQ+
Sbjct: 435 KQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLIVGYSQS 493

Query: 551 KAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
           +    +L LF+ +     E + +S +  LSAC  L   + GK+IHG +       + F++
Sbjct: 494 QCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLA 553

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           ++LLD+Y+                 K  A+W++MI  YG HG+   A ELF  M + G+ 
Sbjct: 554 NSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVD 613

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
               S I++LSACSH GLVD G +Y++ M+ + +++P+  H+ C+VD+LGR+G+L E+ E
Sbjct: 614 YDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVE 672

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I N+P      VWGA+L +C  HGD ++ +  AE LF+L+PE+ GYY  L NMY   G 
Sbjct: 673 IITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGM 732

Query: 773 WKDAVEI 779
           W +A EI
Sbjct: 733 WNEANEI 739



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 250/505 (49%), Gaps = 22/505 (4%)

Query: 1   RGFL-AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           RG L A +    +L+T Y+       +  +F E   +D+V+WN++++A + N  +     
Sbjct: 140 RGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKR 199

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
               M+  GI  +  +L+ +V A         G  VH L +K+G+ +  +L N  V+MY 
Sbjct: 200 AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K GDL SS   F+GM   + VSWN+ +    H  + E  L  FR M        +V+LSS
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   LG    GK +H   I+   E   +++  NSL+ MY++ G +E A   F  +  
Sbjct: 320 LLPALVDLGYFHLGKEVHGYSIRRAMESDIFIA--NSLMDMYAKFGCLEKASAIFENIEG 377

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGR 298
           ++VVSWNA+I   A NG   EAF L+ EMQ  ++ E P+  T+V L+  C+    ++ G+
Sbjct: 378 RNVVSWNAMIANLAQNGAETEAFSLVIEMQ--KNGECPNSFTLVNLLPACSRVASVKMGK 435

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H ++I R L  DL + N+L+D Y+K   LS A+ +F+      D VS+N++I G    
Sbjct: 436 QIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFD--RSEKDDVSYNTLIVGYSQS 493

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF++M     ++   + +  L +C +  + + GK IH   ++   + +    
Sbjct: 494 QCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLA 553

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N+L+ +Y   G L  A  +  RI+   D + WN +I+    +G    A + F  M +   
Sbjct: 554 NSLLDLYTKGGMLATASKIFNRITRK-DVASWNTMILGYGMHGQIDVAFELFDLM-KDDG 611

Query: 467 ASPDSVTLVNVISACGNLELAFEGK 491
              D V+ + V+SAC +  L   GK
Sbjct: 612 VDYDHVSYIAVLSACSHGGLVDRGK 636


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 306/596 (51%), Gaps = 35/596 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+ + +  +   ++ A   F  +  +D VSW  II G+  +    EA  L  +M+L   +
Sbjct: 53  NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             D   +   +  C   L    G ++HG++++  L   + + ++L+D Y K   + ++  
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172

Query: 335 LFNAIAPMNDLVSWNSMISGLFKE------MLYLCSQF-------SFSTLLAILPSCNSP 381
           +F+ + P  + V+W ++I+GL +       + Y            S++  +A+  S +S 
Sbjct: 173 VFDEM-PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L  G+SIH   LK GF  N+   N+L  MY  CG L       +++    D   W  +
Sbjct: 232 -ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-RTLDVVSWTTI 289

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           + A  Q G     ++ FK M +  N  P+  T   VIS C N      G+ LH   L   
Sbjct: 290 VTAYIQMGKEDCGLQAFKRM-RASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVG 348

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                 V N+++T+Y +C ++ S S VF S    ++ TW+ +I+A+SQ      A E   
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +  E   PNE ++ S+LS C  + +L  GKQ+H HV  +G ++ S + SAL+ MY+ C 
Sbjct: 409 RMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCG 468

Query: 619 SNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S A               +W++MIS Y  HG   EAIELF  +   G+RP   + I +L+
Sbjct: 469 SIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLT 528

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+G+VD G  Y+N+M ++Y + P  EH+ C++D+L R+G+L +A   I+++PIQ   
Sbjct: 529 ACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDD 588

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            VW  +L AC  HGD   G++ A  + KL+P   G +I+L+N++ A G+WK+A  I
Sbjct: 589 VVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANI 644



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 245/500 (49%), Gaps = 26/500 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-V 65
           L  + + L      ++ + +  LF +   +D V+W  +I+  V +      L  F +M +
Sbjct: 49  LAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRL 108

Query: 66  EEGIRFDSTTL-LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +  +R D   L L + +    +N L  G  +H  S+K G++    + +  ++MY K G++
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             S   F  M   + V+W  +++G +   Y E  L YF  MG S  + D+ + + A+ AS
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A  G L++G+ IH   +K G++++ +V+  NSL +MY++CG ++     F  M   DVVS
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVA--NSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  I+  +   GK +        M+   +V P+  T   +IS CA+   L+ G  +H + 
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           +       L + NS+M  YSK   L+    +F ++    D+++W+++I+  + ++ Y   
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM-KFRDIITWSTIIAA-YSQVGYGEE 402

Query: 365 QFSFST-------------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            F + +             L ++L  C S   LE GK +H   L +G    ++  +AL+ 
Sbjct: 403 AFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALII 462

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A  +    S   D   W  +I    ++GH QEAI+ F+++ Q+    PDS
Sbjct: 463 MYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENI-QKVGLRPDS 520

Query: 472 VTLVNVISAC---GNLELAF 488
           VT + V++AC   G ++L F
Sbjct: 521 VTFIGVLTACSHAGMVDLGF 540



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 287/641 (44%), Gaps = 53/641 (8%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D +  N  + +  K   L  +   F  +   D VSW  I+SG ++++   + L  F +M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 167 WSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
              E + D   LS  +          YG  +H   +K G  +S +V   ++L+ MY + G
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVG--SALLDMYMKIG 165

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           +I  + + F  M  ++ V+W A+I G    G  E        M   + VE D       +
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSK-VEYDSYAYAIAL 224

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
              ADS  L  GRS+H   +++    +  + NSL   Y+K   L      F  +  + D+
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL-DV 283

Query: 346 VSWNSMIS----------GL--FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           VSW ++++          GL  FK M     + ++++FS   A++  C +   L++G+ +
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS---AVISCCANFARLKWGEQL 340

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   L +GF N     N++M +Y  CG+L +   +   +    D   W+ +I A +Q G+
Sbjct: 341 HAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAAYSQVGY 399

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            +EA +    M + +   P+   L +V+S CG++ +  +GK LH   L   +   + V +
Sbjct: 400 GEEAFEYLSRM-RSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           ALI MY +C  I  AS +F   +  ++ +W  MIS ++++     A+ELF +++     P
Sbjct: 459 ALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRP 518

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
           + ++ + +L+AC+  G++            LGF    +  +++   Y    S   +  MI
Sbjct: 519 DSVTFIGVLTACSHAGMV-----------DLGF----YYFNSMSKDYHITPSKEHYGCMI 563

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
                 G+  +A  L   M    I+       +LL AC   G VD G +    +L+   +
Sbjct: 564 DLLCRAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK---L 617

Query: 688 RPE-TEHHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPG 724
            P     H+ + ++    GK +EA      +K+  +  +PG
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPG 658



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 236/507 (46%), Gaps = 32/507 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   ++LL  Y  +     S  +F E   ++ VTW A+IT  V       GL +F
Sbjct: 146 GLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYF 205

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    + +DS    I + A      L  GR +H  ++K G   +S + N    MY KC
Sbjct: 206 SGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC 265

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+    TF  M   D VSW TI++  +     +  L  F+ M  S    +  + S+ +
Sbjct: 266 GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVI 325

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A    L +G+ +HA  + +G+ ++  +SV NS++++YS+CG++ +  + F  M  +D
Sbjct: 326 SCCANFARLKWGEQLHAHVLCVGFVNA--LSVANSIMTLYSKCGELASVSKVFCSMKFRD 383

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++W+ II  ++  G  EEAF+ L  M+     +P+   + +++S+C    +L +G+ +H
Sbjct: 384 IITWSTIIAAYSQVGYGEEAFEYLSRMR-SEGPKPNEFALASVLSVCGSMAILEQGKQLH 442

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +   L    ++ ++L+  Y+K  S+++A  +F   +  +D++SW +MISG       
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHS 501

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG--------KSIHCWQLKLGFSN 401
                LF+ +  +  +    T + +L +C+    ++ G        K  H    K  +  
Sbjct: 502 QEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY-- 559

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                  ++ +    G L  A +L++ +    D   W+ ++ AC  +G      +    +
Sbjct: 560 -----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEV 614

Query: 462 TQ-QQNASPDSVTLVNVISACGNLELA 487
            +   N +   +TL N+ +A G  + A
Sbjct: 615 LKLDPNCAGTHITLANIFAAKGKWKEA 641



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 14/384 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  +   + SL T Y+     +  L  F +    DVV+W  ++TA ++      GL  
Sbjct: 246 KGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M    +  +  T   ++S       LK G  +H   +  G +   S+ N  + +Y+K
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L S    F  M   D ++W+TI++      Y E+   Y   M   G + +  +L+S 
Sbjct: 366 CGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASV 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++    +  L  GK +HA  + +G E +    V ++LI MY++CG I  A + F      
Sbjct: 426 LSVCGSMAILEQGKQLHAHVLSVGLEQTSM--VCSALIIMYAKCGSIAEASKIFMDSWKD 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SW A+I G+A +G  +EA +L   +Q +  + PD  T + +++ C+ +     G   
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKV-GLRPDSVTFIGVLTACSHA-----GMVD 537

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G+     +  D  +  S      ++D   ++  L  AE L  ++    D V W++++  
Sbjct: 538 LGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRA 597

Query: 355 LFKEMLYLCSQFSFSTLLAILPSC 378
                   C Q + + +L + P+C
Sbjct: 598 CRIHGDVDCGQRAAAEVLKLDPNC 621


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 210/669 (31%), Positives = 335/669 (50%), Gaps = 51/669 (7%)

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           C   +Y E    +   +  S  Q +  +  + + A   +  L YGK IH   +K   +  
Sbjct: 55  CKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQ-- 112

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P + + N +++MY +CG ++ A +AF  M  + VVSW  +I G++ NG+  +A  ++  +
Sbjct: 113 PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDA--IIMYI 170

Query: 269 QLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           Q++RS   PD  T  ++I  C  +  +  G  +HG+ I+    + L+  N+L+  Y+K  
Sbjct: 171 QMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFG 230

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG----------------LFKEMLYLCSQFSFSTL 371
            ++ A  +F  I+   DL+SW SMI+G                +F++ +Y  ++F F ++
Sbjct: 231 QIAHASDVFTMIS-TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSV 289

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            +   +C S    EFG+ I     K G   N     +L  MY   G L +A     +I  
Sbjct: 290 FS---ACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE- 345

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + D   WN +I A   N    EAI  F  M       PD +T +N++ ACG+     +G 
Sbjct: 346 SPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHM-GLMPDDITFLNLLCACGSPMTLNQGM 403

Query: 492 SLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFS 548
            +H   +K  MGLD    V N+L+TMY +C ++  A  VF+    N NL +WN ++SA S
Sbjct: 404 QIHSYIIK--MGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACS 461

Query: 549 QNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q+K    A  LF+ + F   +P+ I+I +IL  C +L  L  G Q+H      G   +  
Sbjct: 462 QHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVS 521

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +S+ L+DMY+ C                   +WSS+I  Y   G G EA+ LF  M N G
Sbjct: 522 VSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLG 581

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++P + + + +LSACSH GLV+EG   YN M  E  + P  EH  C+VD+L R+G L EA
Sbjct: 582 VQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEA 641

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
             FIK     P   +W  +L++C  HG+  + ++ AE + KL+P N    + LSN++ + 
Sbjct: 642 ENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASA 701

Query: 771 GRWKDAVEI 779
           G WK+   +
Sbjct: 702 GNWKEVARL 710



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 188/675 (27%), Positives = 319/675 (47%), Gaps = 45/675 (6%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ + +T + ++ A T +  LK G+ +H   +K+    D  L N  +NMY KCG L  + 
Sbjct: 76  IQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 135

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M     VSW  ++SG   N      ++ + +M  SG   D ++  S + A    G
Sbjct: 136 KAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAG 195

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++  G  +H   IK GY+   ++   N+LISMY++ G I  A   F  ++ KD++SW ++
Sbjct: 196 DIDLGGQLHGHVIKSGYDH--HLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASM 253

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF   G   EA  L  +M      +P+     ++ S C   L    GR + G   +  
Sbjct: 254 ITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFG 313

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----------FK 357
           LG ++    SL D Y+K   L  A+  F  I    DLVSWN++I+ L           F 
Sbjct: 314 LGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIES-PDLVSWNAIIAALANSDVNEAIYFFC 372

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M+++       T L +L +C SP +L  G  IH + +K+G        N+L+ MY  C 
Sbjct: 373 QMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCS 432

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  AF++ + IS N +   WN ++ AC+Q+    EA + FK M   +N  PD++T+  +
Sbjct: 433 NLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSEN-KPDNITITTI 491

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C  L     G  +H  ++KS + +D  V N LI MY +C  +K A  VF+S  N ++
Sbjct: 492 LGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDI 551

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W+ +I  ++Q      AL LF   R+L  +PNE++ + +LSAC+ +G++  G  ++  
Sbjct: 552 VSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNT 611

Query: 595 V-FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +   LG        S ++D+ +                  G  +EA     +   +G  P
Sbjct: 612 MEIELGIPPTREHVSCMVDLLARA----------------GCLYEAENFIKK---TGFDP 652

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQE 709
             +   +LL++C   G VD   +   N+L+   + P     + ++  +    G   ++  
Sbjct: 653 DITMWKTLLASCKTHGNVDIAERAAENILK---LDPSNSAALVLLSNIHASAGNWKEVAR 709

Query: 710 AYEFIKNLPIQPKPG 724
               +K + +Q  PG
Sbjct: 710 LRNLMKQMGVQKVPG 724



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 227/495 (45%), Gaps = 19/495 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L  Y      + +   F     + VV+W  MI+   +N      +  + +M+  G   D
Sbjct: 121 ILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPD 180

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   I+ A      +  G  +H   IK+G        N  ++MY K G +  +   F+
Sbjct: 181 QLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFT 240

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELS 191
            +   D +SW ++++G     Y  + L  FR+M   G  Q +     S  +A   L +  
Sbjct: 241 MISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPE 300

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G+ I  +  K G   + +     SL  MY++ G + +A+RAF+ +   D+VSWNAII  
Sbjct: 301 FGRQIQGMCAKFGLGRNVFAGC--SLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA 358

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A N    EA     +M  M  + PD  T + L+  C   + L +G  +H Y I+  L  
Sbjct: 359 LA-NSDVNEAIYFFCQMIHM-GLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDK 416

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
              + NSL+  Y+K ++L  A  +F  I+   +LVSWN+++S             LFK M
Sbjct: 417 VAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLM 476

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L+  ++    T+  IL +C    SLE G  +HC+ +K G   +    N L+ MY  CG L
Sbjct: 477 LFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLL 536

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +    + N D   W+ +IV   Q G  QEA+  F+ M +     P+ VT + V+S
Sbjct: 537 KHARYVFDS-TQNPDIVSWSSLIVGYAQFGLGQEALNLFR-MMRNLGVQPNEVTYLGVLS 594

Query: 480 ACGNLELAFEGKSLH 494
           AC ++ L  EG  L+
Sbjct: 595 ACSHIGLVEEGWHLY 609



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/568 (24%), Positives = 250/568 (44%), Gaps = 75/568 (13%)

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +S N+ I+       + EA D  +      S++ + +T V LI  C +   L+ G+ +H 
Sbjct: 45  LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           + ++     DL++ N +++ Y K  SL  A   F+ +  +  +VSW  MISG        
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ-LRSVVSWTIMISGYSQNGQEN 163

Query: 355 ----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
               ++ +ML   Y   Q +F +   I+ +C     ++ G  +H   +K G+ ++ I  N
Sbjct: 164 DAIIMYIQMLRSGYFPDQLTFGS---IIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQN 220

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G +  A  +   IS   D   W  +I   TQ G+  EA+  F+ M +Q   
Sbjct: 221 ALISMYTKFGQIAHASDVFTMIS-TKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVY 279

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+     +V SAC +L     G+ + G+  K  +G +     +L  MY +   + SA  
Sbjct: 280 QPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKR 339

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGV 584
            F    + +L +WN +I+A + +     A+  F    H+   P++I+ +++L AC     
Sbjct: 340 AFYQIESPDLVSWNAIIAALANSDVN-EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMT 398

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN-----------------AAWSSMI 627
           L  G QIH ++  +G  + + + ++LL MY+ C SN                  +W++++
Sbjct: 399 LNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKC-SNLHDAFNVFKDISENGNLVSWNAIL 457

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH----------------SGLV 671
           SA   H +  EA  LF  M  S  +P   ++ ++L  C+                 SGLV
Sbjct: 458 SACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLV 517

Query: 672 DE--------------GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFI 714
            +              GL  +   + +    P+      ++    + G  QEA   +  +
Sbjct: 518 VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMM 577

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +NL +QP    +  +LSACSH G  + G
Sbjct: 578 RNLGVQPNEVTYLGVLSACSHIGLVEEG 605



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 248/502 (49%), Gaps = 29/502 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  HL    +L++ Y+       +  +F     KD+++W +MIT   +    +  L+ F
Sbjct: 211 GYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLF 270

Query: 62  GEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGM----IADSSLCNVFVN 116
            +M  +G+   +  +   + SA   +   + GR +  +  K G+     A  SLC    +
Sbjct: 271 RDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLC----D 326

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYAK G L S++  F  +   D VSWN I++  L N+   + + +F +M   G   D+++
Sbjct: 327 MYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA-LANSDVNEAIYFFCQMIHMGLMPDDIT 385

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             + + A      L+ G  IH+  IK+G +     +V NSL++MY++C ++  A   F  
Sbjct: 386 FLNLLCACGSPMTLNQGMQIHSYIIKMGLDK--VAAVCNSLLTMYTKCSNLHDAFNVFKD 443

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           ++   ++VSWNAI+   + + +  EAF L  ++ L    +PD  T+ T++  CA+ + L 
Sbjct: 444 ISENGNLVSWNAILSACSQHKQPGEAFRLF-KLMLFSENKPDNITITTILGTCAELVSLE 502

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G  VH ++++  L  D+ + N L+D Y+K   L  A  +F++     D+VSW+S+I G 
Sbjct: 503 VGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQN-PDIVSWSSLIVGY 561

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNN 402
                      LF+ M  L  Q +  T L +L +C+    +E G  ++   +++LG    
Sbjct: 562 AQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPT 621

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
              V+ ++ +    G L  A + +++   + D + W  ++ +C  +G+   A +  +++ 
Sbjct: 622 REHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENIL 681

Query: 463 QQQNASPDSVTLV-NVISACGN 483
           +   ++  ++ L+ N+ ++ GN
Sbjct: 682 KLDPSNSAALVLLSNIHASAGN 703


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 306/596 (51%), Gaps = 35/596 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+ + +  +   ++ A   F  +  +D VSW  II G+  +    EA  L  +M+L   +
Sbjct: 53  NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             D   +   +  C   L    G ++HG++++  L   + + ++L+D Y K   + ++  
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172

Query: 335 LFNAIAPMNDLVSWNSMISGLFKE------MLYLCSQF-------SFSTLLAILPSCNSP 381
           +F+ + P  + V+W ++I+GL +       + Y            S++  +A+  S +S 
Sbjct: 173 VFDEM-PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L  G+SIH   LK GF  N+   N+L  MY  CG L       +++    D   W  +
Sbjct: 232 -ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-RTLDVVSWTTI 289

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           + A  Q G     ++ FK M +  N  P+  T   VIS C N      G+ LH   L   
Sbjct: 290 VTAYIQMGKEDCGLQAFKRM-RASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVG 348

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                 V N+++T+Y +C ++ S S VF S    ++ TW+ +I+A+SQ      A E   
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +  E   PNE ++ S+LS C  + +L  GKQ+H HV  +G ++ S + SAL+ MY+ C 
Sbjct: 409 RMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCG 468

Query: 619 SNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S A               +W++MIS Y  HG   EAIELF  +   G+RP   + I +L+
Sbjct: 469 SIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLT 528

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+G+VD G  Y+N+M ++Y + P  EH+ C++D+L R+G+L +A   I+++PIQ   
Sbjct: 529 ACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDD 588

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            VW  +L AC  HGD   G++ A  + KL+P   G +I+L+N++ A G+WK+A  I
Sbjct: 589 VVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANI 644



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 245/500 (49%), Gaps = 26/500 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-V 65
           L  + + L      ++ + +  LF +   +D V+W  +I+  V +      L  F +M +
Sbjct: 49  LAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRL 108

Query: 66  EEGIRFDSTTL-LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +  +R D   L L + +    +N L  G  +H  S+K G++    + +  ++MY K G++
Sbjct: 109 QSELRIDPFLLSLGLKTCGLGLNYL-YGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             S   F  M   + V+W  +++G +   Y E  L YF  MG S  + D+ + + A+ AS
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A  G L++G+ IH   +K G++++ +V+  NSL +MY++CG ++     F  M   DVVS
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVA--NSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  I+  +   GK +        M+   +V P+  T   +IS CA+   L+ G  +H + 
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMR-ASNVIPNEYTFSAVISCCANFARLKWGEQLHAHV 344

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           +       L + NS+M  YSK   L+    +F ++    D+++W+++I+  + ++ Y   
Sbjct: 345 LCVGFVNALSVANSIMTLYSKCGELASVSKVFCSM-KFRDIITWSTIIAA-YSQVGYGEE 402

Query: 365 QFSFST-------------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            F + +             L ++L  C S   LE GK +H   L +G    ++  +AL+ 
Sbjct: 403 AFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALII 462

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A  +    S   D   W  +I    ++GH QEAI+ F+++ Q+    PDS
Sbjct: 463 MYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENI-QKVGLRPDS 520

Query: 472 VTLVNVISAC---GNLELAF 488
           VT + V++AC   G ++L F
Sbjct: 521 VTFIGVLTACSHAGMVDLGF 540



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 287/641 (44%), Gaps = 53/641 (8%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D +  N  + +  K   L  +   F  +   D VSW  I+SG ++++   + L  F +M 
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 167 WSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
              E + D   LS  +          YG  +H   +K G  +S +V   ++L+ MY + G
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVG--SALLDMYMKIG 165

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           +I  + + F  M  ++ V+W A+I G    G  E        M   + VE D       +
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSK-VEYDSYAYAIAL 224

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
              ADS  L  GRS+H   +++    +  + NSL   Y+K   L      F  +  + D+
Sbjct: 225 KASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL-DV 283

Query: 346 VSWNSMIS----------GL--FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           VSW ++++          GL  FK M     + ++++FS   A++  C +   L++G+ +
Sbjct: 284 VSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFS---AVISCCANFARLKWGEQL 340

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   L +GF N     N++M +Y  CG+L +   +   +    D   W+ +I A +Q G+
Sbjct: 341 HAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAAYSQVGY 399

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            +EA +    M + +   P+   L +V+S CG++ +  +GK LH   L   +   + V +
Sbjct: 400 GEEAFEYLSRM-RSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           ALI MY +C  I  AS +F   +  ++ +W  MIS ++++     A+ELF +++     P
Sbjct: 459 ALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRP 518

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
           + ++ + +L+AC+  G++            LGF    +  +++   Y    S   +  MI
Sbjct: 519 DSVTFIGVLTACSHAGMV-----------DLGF----YYFNSMSKDYHITPSKEHYGCMI 563

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
                 G+  +A  L   M    I+       +LL AC   G VD G +    +L+   +
Sbjct: 564 DLLCRAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK---L 617

Query: 688 RPE-TEHHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPG 724
            P     H+ + ++    GK +EA      +K+  +  +PG
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPG 658



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 236/507 (46%), Gaps = 32/507 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   ++LL  Y  +     S  +F E   ++ VTW A+IT  V       GL +F
Sbjct: 146 GLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYF 205

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    + +DS    I + A      L  GR +H  ++K G   +S + N    MY KC
Sbjct: 206 SGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC 265

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+    TF  M   D VSW TI++  +     +  L  F+ M  S    +  + S+ +
Sbjct: 266 GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVI 325

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A    L +G+ +HA  + +G+ ++  +SV NS++++YS+CG++ +  + F  M  +D
Sbjct: 326 SCCANFARLKWGEQLHAHVLCVGFVNA--LSVANSIMTLYSKCGELASVSKVFCSMKFRD 383

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++W+ II  ++  G  EEAF+ L  M+     +P+   + +++S+C    +L +G+ +H
Sbjct: 384 IITWSTIIAAYSQVGYGEEAFEYLSRMR-SEGPKPNEFALASVLSVCGSMAILEQGKQLH 442

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +   L    ++ ++L+  Y+K  S+++A  +F   +  +D++SW +MISG       
Sbjct: 443 AHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEHGHS 501

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG--------KSIHCWQLKLGFSN 401
                LF+ +  +  +    T + +L +C+    ++ G        K  H    K  +  
Sbjct: 502 QEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHY-- 559

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                  ++ +    G L  A +L++ +    D   W+ ++ AC  +G      +    +
Sbjct: 560 -----GCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEV 614

Query: 462 TQ-QQNASPDSVTLVNVISACGNLELA 487
            +   N +   +TL N+ +A G  + A
Sbjct: 615 LKLDPNCAGTHITLANIFAAKGKWKEA 641



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 14/384 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF  +   + SL T Y+     +  L  F +    DVV+W  ++TA ++      GL  
Sbjct: 246 KGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M    +  +  T   ++S       LK G  +H   +  G +   S+ N  + +Y+K
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L S    F  M   D ++W+TI++      Y E+   Y   M   G + +  +L+S 
Sbjct: 366 CGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASV 425

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++    +  L  GK +HA  + +G E +    V ++LI MY++CG I  A + F      
Sbjct: 426 LSVCGSMAILEQGKQLHAHVLSVGLEQTSM--VCSALIIMYAKCGSIAEASKIFMDSWKD 483

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SW A+I G+A +G  +EA +L   +Q +  + PD  T + +++ C+ +     G   
Sbjct: 484 DIISWTAMISGYAEHGHSQEAIELFENIQKV-GLRPDSVTFIGVLTACSHA-----GMVD 537

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G+     +  D  +  S      ++D   ++  L  AE L  ++    D V W++++  
Sbjct: 538 LGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRA 597

Query: 355 LFKEMLYLCSQFSFSTLLAILPSC 378
                   C Q + + +L + P+C
Sbjct: 598 CRIHGDVDCGQRAAAEVLKLDPNC 621


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 209/721 (28%), Positives = 366/721 (50%), Gaps = 47/721 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF-SGMHCADTVSWNTIMSGCLHNN 153
           ++C + K G+  D+ +C+  V++ AK G L  +   F  G +    V WNT +SG + N 
Sbjct: 94  LYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNG 153

Query: 154 YPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY-V 211
                +  F +M   S  + ++ + S  ++A A   EL  G+ +H + ++    DS Y V
Sbjct: 154 EHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLR---RDSEYDV 210

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V  S+++MY +CG + AA   FW M  ++VVSW   I GF        A  LL EM L 
Sbjct: 211 FVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEM-LR 269

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V  +  T  +++  C+ + ++RE   VHG  I+  L  D ++  +L+  Y+ + ++  
Sbjct: 270 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 329

Query: 332 AELLFNAIAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNS 380
            E +F  +  +++   W++ ISG           L + ML+ C + +     ++  S +S
Sbjct: 330 CEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVDS 389

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E    G+ +H   +K GF +  +  +AL  MY  C DL  ++ + + +    + S W  
Sbjct: 390 SE---LGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS-WTS 445

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I     +GH  EA +  ++M  +   +P+ V+L  ++SAC   E   +GK +HG  L++
Sbjct: 446 MIAGFATHGHSVEAFQVLRNMIAE-GFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA 504

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
             G  T + + L++MY +C+D+++A  +F++    +    + MIS ++ N     AL LF
Sbjct: 505 Y-GRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLF 563

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS-- 615
           + +    F  +     SI+S C  +     GK +HG+   +G   +  +SS+L+ +YS  
Sbjct: 564 QLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKS 623

Query: 616 -------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                        +      W+++I  Y  HG   +A+ LF  M   G++P    ++S+L
Sbjct: 624 GNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVL 683

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC  +GLV+EG +++N+M   Y V P   H+ C+VD+LGRSG+L EA  FI+++P++P 
Sbjct: 684 SACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPN 743

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV--GYYISLSNMYVALGRWKDAVEIG 780
             VW  +L+AC  H D  +G+ V     K+  EN   G + ++SN+    G W+  +EI 
Sbjct: 744 SMVWSTLLAACRVHDDVVLGRFVEN---KIHEENCDSGCFATMSNIRANSGDWEGVMEIR 800

Query: 781 K 781
           K
Sbjct: 801 K 801



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 175/665 (26%), Positives = 287/665 (43%), Gaps = 48/665 (7%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RFDSTTLLIIVSALTQMNCLKQGRVVH 96
           VV WN  I+  V N    +G+  F +MV       +S T   ++SA      L  GR VH
Sbjct: 139 VVCWNTAISGAVRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVH 198

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
            + ++     D  +    VNMY KCG + ++   F  M   + VSW T ++G +    P 
Sbjct: 199 GMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPV 258

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTN 215
             +L   EM  SG   +  + +S + A +    +     +H + IK   Y D     V  
Sbjct: 259 NAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDH---VVKE 315

Query: 216 SLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           +LIS Y+  G ++  E+ F  + T  +   W+A I G + +   + +  LL  M L + +
Sbjct: 316 ALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRH-SVQRSIQLLRRM-LFQCL 373

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+     ++ S    S L   GR +H   I+    + +L+ ++L   YS+ N L  +  
Sbjct: 374 RPNDKCYASVFSSVDSSEL---GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYK 430

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  +    D VSW SMI+G            + + M+      +  +L AIL +CN PE
Sbjct: 431 VFEEMQE-QDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPE 489

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK +H   L+  +   T   + L+ MY  C DL  A  L    +   D    + +I
Sbjct: 490 CLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFD-ATPCKDQIMLSSMI 547

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                NG+ +EA+  F+ M        D     ++IS C N+   F GK LHG A K  +
Sbjct: 548 SGYATNGYSEEALSLFQLML-AAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGI 606

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  V ++L+ +Y +  ++  +  VF+     +L TW  +I  ++Q+ +   AL LF  
Sbjct: 607 LSDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDL 666

Query: 563 L---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           +     +P+ + +VS+LSAC + G++  G +      H       +    +L  Y     
Sbjct: 667 MIRCGVKPDTVILVSVLSACGRNGLVEEGFK------HFNSMRTVYGVEPVLHHY----- 715

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
                 M+   G  G+  EA      M    ++P      +LL+AC     V  G    N
Sbjct: 716 ----CCMVDLLGRSGRLVEAKSFIESM---PVKPNSMVWSTLLAACRVHDDVVLGRFVEN 768

Query: 680 NMLEE 684
            + EE
Sbjct: 769 KIHEE 773



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 266/558 (47%), Gaps = 40/558 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TS++  Y       +++  F+    ++VV+W   I   V+    V  +    EM+  G+ 
Sbjct: 214 TSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVA 273

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+ A +Q + +++   VH + IK+ +  D  +    ++ YA  G +   E  
Sbjct: 274 INKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKV 333

Query: 131 FSGMHCADTVS----WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           F  +   DTVS    W+  +SG   ++  ++ +   R M +   + ++   +S V +S  
Sbjct: 334 FQEV---DTVSNRSIWSAFISGVSRHSV-QRSIQLLRRMLFQCLRPNDKCYAS-VFSSVD 388

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
             EL  G+ +H L IK G+     V V ++L +MYS+C D++ + + F  M  +D VSW 
Sbjct: 389 SSEL--GRQLHPLVIKDGFIH--VVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWT 444

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I GFA +G   EAF +L  M +     P+  ++  ++S C     L +G+ VHG+ + 
Sbjct: 445 SMIAGFATHGHSVEAFQVLRNM-IAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVL- 502

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R  G    + + L+  YSK   L  A  LF+A  P  D +  +SMISG            
Sbjct: 503 RAYGRTTSINHCLVSMYSKCKDLQTARKLFDA-TPCKDQIMLSSMISGYATNGYSEEALS 561

Query: 355 LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           LF+ ML   +   +F  S++++I  +   P     GK +H +  K+G  ++    ++L+ 
Sbjct: 562 LFQLMLAAGFHIDRFLCSSIISICANMARPFC---GKLLHGYASKVGILSDLSVSSSLVK 618

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y   G+L  +  +   +    D   W  +I    Q+G  Q+A+  F  M  +    PD+
Sbjct: 619 LYSKSGNLDDSRKVFDELD-VPDLVTWTAIIDGYAQHGSSQDALALFDLMI-RCGVKPDT 676

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF 529
           V LV+V+SACG   L  EG   H  +++++ G++  + +   ++ + GR   +  A +  
Sbjct: 677 VILVSVLSACGRNGLVEEGFK-HFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFI 735

Query: 530 ESC-YNCNLCTWNCMISA 546
           ES     N   W+ +++A
Sbjct: 736 ESMPVKPNSMVWSTLLAA 753



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 184/355 (51%), Gaps = 7/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +  +++L T YS  +  + S  +F E   +D V+W +MI     +   V      
Sbjct: 404 GFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVL 463

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG   +  +L  I+SA     CL +G+ VH   ++A     +S+ +  V+MY+KC
Sbjct: 464 RNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRA-YGRTTSINHCLVSMYSKC 522

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL ++   F    C D +  ++++SG   N Y E+ L  F+ M  +G   D    SS +
Sbjct: 523 KDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSII 582

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A +     GK++H    K+G      +SV++SL+ +YS+ G+++ + + F  +   D
Sbjct: 583 SICANMARPFCGKLLHGYASKVGILSD--LSVSSSLVKLYSKSGNLDDSRKVFDELDVPD 640

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+W AIIDG+A +G  ++A  L  ++ +   V+PD   +V+++S C  + L+ EG   H
Sbjct: 641 LVTWTAIIDGYAQHGSSQDALALF-DLMIRCGVKPDTVILVSVLSACGRNGLVEEGFK-H 698

Query: 302 GYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             ++R + G + ++ +   ++D   +S  L +A+    ++    + + W+++++ 
Sbjct: 699 FNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAA 753



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 217/472 (45%), Gaps = 54/472 (11%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVT----WNAMITACVENRCVVMGL 58
           +L H+    +L++ Y+N    +    +F E    D V+    W+A I+  V    V   +
Sbjct: 308 YLDHV-VKEALISTYANAGAVQLCEKVFQEV---DTVSNRSIWSAFISG-VSRHSVQRSI 362

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
                M+ + +R +        S  + ++  + GR +H L IK G I    + +    MY
Sbjct: 363 QLLRRMLFQCLRPNDKCY---ASVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMY 419

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           ++C DL  S   F  M   D VSW ++++G   + +  +     R M   G   ++VSLS
Sbjct: 420 SRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLS 479

Query: 179 SAVAA---SACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + ++A     CL  G+  +G V+ A G           S+ + L+SMYS+C D++ A + 
Sbjct: 480 AILSACNIPECLLKGKEVHGHVLRAYG--------RTTSINHCLVSMYSKCKDLQTARKL 531

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F    CKD +  +++I G+A NG  EEA  L  ++ L      D     ++IS+CA+   
Sbjct: 532 FDATPCKDQIMLSSMISGYATNGYSEEALSLF-QLMLAAGFHIDRFLCSSIISICANMAR 590

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
              G+ +HGYA +  +  DL + +SL+  YSKS +L  +  +F+ +  + DLV+W ++I 
Sbjct: 591 PFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDEL-DVPDLVTWTAIID 649

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF  M+    +     L+++L +C     +E G        K   S 
Sbjct: 650 GYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEG-------FKHFNSM 702

Query: 402 NTI-GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            T+ GV  ++H Y          G LV A S ++ +    ++  W+ ++ AC
Sbjct: 703 RTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAAC 754



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 159/384 (41%), Gaps = 35/384 (9%)

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           F + ++C   K G S +    + ++ +    G L  A    +   +     CWN  I   
Sbjct: 90  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 149

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            +NG     ++ F  M +     P+S T   V+SAC   E    G+++HG+ L+     D
Sbjct: 150 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYD 209

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-- 563
             V  +++ MY +C  + +A   F      N+ +W   I+ F Q +  V A+ L   +  
Sbjct: 210 VFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLR 269

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
                N+ +  SIL AC+Q  ++R   Q+HG +       +  +  AL+  Y+N      
Sbjct: 270 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 329

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                       + + WS+ IS    H     +I+L   M    +RP      S+ S+  
Sbjct: 330 CEKVFQEVDTVSNRSIWSAFISGVSRHSV-QRSIQLLRRMLFQCLRPNDKCYASVFSSVD 388

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV-----DMLGRSGKLQEAYEFIKNLPIQP 721
            S L   G Q +  ++++  +      HV +V      M  R   L+++Y+  + +  Q 
Sbjct: 389 SSEL---GRQLHPLVIKDGFI------HVVLVASALSTMYSRCNDLKDSYKVFEEMQEQD 439

Query: 722 KPGVWGAMLSACSHHGDTKMGKQV 745
           +   W +M++  + HG +    QV
Sbjct: 440 EVS-WTSMIAGFATHGHSVEAFQV 462


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/579 (31%), Positives = 319/579 (55%), Gaps = 45/579 (7%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR---SVEPDIATVVTLISLCADSLLLRE 296
           ++ VSWN++I  F+ NG  EE+F LL EM       +  PD+AT+VT++ +CA    +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ VHG+A++  L  +L++ N+LMD YSK   ++ A+++F      N +VSWN+M+ G  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN-VVSWNTMVGGFS 119

Query: 355 ----------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                     + ++ML           T+L  +P C     L   K +HC+ LK  F  N
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +  NA +  Y  CG L    S  QR+ H   +   + WN +I    Q+   + ++    
Sbjct: 180 ELVANAFVASYAKCGSL----SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M +     PDS T+ +++SAC  L+    GK +HG  +++ +  D  V  +++++Y  C
Sbjct: 236 QM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 294

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSIL 576
            ++ +   +F++  + +L +WN +I+ + QN    RAL +FR +     +   IS++ + 
Sbjct: 295 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 354

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+ L  LR G++ H +      ++++FI+ +L+DMY+                 KS A
Sbjct: 355 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W++MI  YG HG   EAI+LF EM  +G  P   + + +L+AC+HSGL+ EGL+Y + M
Sbjct: 415 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 474

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTK 740
              + ++P  +H+ C++DMLGR+G+L +A   + + +  +   G+W ++LS+C  H + +
Sbjct: 475 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 534

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           MG++VA  LF+LEPE    Y+ LSN+Y  LG+W+D  ++
Sbjct: 535 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 573



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 273/571 (47%), Gaps = 42/571 (7%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEE----GIRFDSTTLLIIVSALTQMNCLKQ 91
           ++ V+WN+MI    +N          GEM+EE        D  TL+ ++    +   +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+ VH  ++K  +  +  L N  ++MY+KCG + +++  F   +  + VSWNT++ G   
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 152 NNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYED 207
                      R+M   GE  +AD V++ +AV    C  E  L   K +H   +K  +  
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP--VCFHESFLPSLKELHCYSLKQEFVY 178

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V+  N+ ++ Y++CG +  A+R F G+  K V SWNA+I G A +     + D   +
Sbjct: 179 NELVA--NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M++   + PD  TV +L+S C+    LR G+ VHG+ IR  L  DL +  S++  Y    
Sbjct: 237 MKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAIL 375
            L   + LF+A+     LVSWN++I+            G+F++M+    Q    +++ + 
Sbjct: 296 ELCTVQALFDAMED-KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 354

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C+   SL  G+  H + LK    ++     +L+ MY   G +  +  +   +   S T
Sbjct: 355 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS-T 413

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           + WN +I+    +G  +EAIK F+ M Q+   +PD +T + V++AC +  L  EG  L  
Sbjct: 414 ASWNAMIMGYGIHGLAKEAIKLFEEM-QRTGHNPDDLTFLGVLTACNHSGLIHEG--LRY 470

Query: 496 L-ALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF--ESCYNCNLCTWNCMISA--FS 548
           L  +KS  GL   +++   +I M GR   +  A  V   E     ++  W  ++S+    
Sbjct: 471 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 530

Query: 549 QN--KAEVRALELFRHLEFEPNEISIVSILS 577
           QN    E  A +LF   E EP +     +LS
Sbjct: 531 QNLEMGEKVAAKLF---ELEPEKPENYVLLS 558



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 225/496 (45%), Gaps = 21/496 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  + +L+  YS      ++  +F    NK+VV+WN M+                 +M+ 
Sbjct: 77  LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 136

Query: 67  --EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             E ++ D  T+L  V      + L   + +HC S+K   + +  + N FV  YAKCG L
Sbjct: 137 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 196

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           + ++  F G+      SWN ++ G   +N P   L    +M  SG   D+ ++ S ++A 
Sbjct: 197 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 256

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           + L  L  GK +H   I+   E   +V +  S++S+Y  CG++   +  F  M  K +VS
Sbjct: 257 SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 314

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I G+  NG  + A  +  +M ++  ++    +++ +   C+    LR GR  H YA
Sbjct: 315 WNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 373

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++ LL  D  +  SL+D Y+K+ S++++  +FN +       SWN+MI G          
Sbjct: 374 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEA 432

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
             LF+EM          T L +L +CN    +  G + +   +   G   N      ++ 
Sbjct: 433 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 492

Query: 412 MYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           M    G L  A  ++ + +S  +D   W  ++ +C  + + +   K    + + +   P+
Sbjct: 493 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 552

Query: 471 S-VTLVNVISACGNLE 485
           + V L N+ +  G  E
Sbjct: 553 NYVLLSNLYAGLGKWE 568


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 189/621 (30%), Positives = 327/621 (52%), Gaps = 43/621 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +HAL +  G   S  + ++  LI++Y   GDI  +   F  +  K++ SWN+II  + 
Sbjct: 39  KKLHALLLVFG--KSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYV 96

Query: 254 LNGKFEEAFDLLHEMQLM---RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             GK+ EA + ++++  M     + PD  T   ++  C     L +G+ VH    +    
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFE 153

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+ +  SL+  YS+   L  A  +F  + P+ D+ SWN+MISG            +   
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDM-PVKDVGSWNAMISGFCQNGNAAGALGVLNR 212

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T+ +ILP C   + +  G  IH   LK G  ++    NAL++MY   G 
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +  ++    D   WN +I A  QN     A++ FK M Q     PD +T+V++ 
Sbjct: 273 LQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGM-QLGGIRPDLLTVVSLT 330

Query: 479 SACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           S    L      +S+ G  ++   +  D  + NAL+ MY +   +  A TVF+     + 
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHG 593
            +WN +++ ++QN     A++ +  +E      PN+ + VSI+ A + +G L+ G +IH 
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +       + F+++ L+D+Y  C                ++  W+++I++ G HG+G E
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A++LF +M    ++    + +SLLSACSHSGLVDEG + ++ M +EY ++P  +H+ C+V
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMV 570

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR+G L++AYE ++N+PIQP   +WGA+LSAC  +G+ ++G   ++ L +++ ENVG
Sbjct: 571 DLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVG 630

Query: 759 YYISLSNMYVALGRWKDAVEI 779
           YY+ LSN+Y    +W+  +++
Sbjct: 631 YYVLLSNIYANTEKWEGVIKV 651



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 291/611 (47%), Gaps = 46/611 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH- 151
           + +H L +  G   +  L    +N+Y   GD++ S  TF  +H  +  SWN+I+S  +  
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 152 NNYPE--KCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             Y E   C+     M   G  + D  +    + A   L +   GK +H    K+G+ED 
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V+   SL+ +YS+ G ++ A + F  M  KDV SWNA+I GF  NG    A  +L+ M
Sbjct: 156 VFVAA--SLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V+ D  TV +++ +CA S  +  G  +H + ++  L  D+ + N+L++ YSK   
Sbjct: 214 K-GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A+++F+ +  + DLVSWNS+I+              FK M     +    T++++  
Sbjct: 273 LQDAQMVFDQME-VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDT 435
             +        +SI  + ++  + +  + + NAL++MY   G +  A ++  ++    DT
Sbjct: 332 IFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DT 390

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN ++   TQNG   EAI  +  M + ++  P+  T V++I A  ++    +G  +H 
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K+ + LD  V   LI +YG+C  ++ A ++F          WN +I++   +     
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL+LF+ +     + + I+ VS+LSAC+  G++  G++     F +  Q+   I  +L  
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK----CFDI-MQKEYGIKPSL-- 563

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                K       ++   GY  K +E +       N  I+P  S   +LLSAC   G  +
Sbjct: 564 -----KHYGCMVDLLGRAGYLEKAYELVR------NMPIQPDASIWGALLSACKIYGNAE 612

Query: 673 EGLQYYNNMLE 683
            G    + +LE
Sbjct: 613 LGTLASDRLLE 623



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 299/674 (44%), Gaps = 84/674 (12%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE-------NRCVVMGLHFFG 62
           ST L+  Y        S + F     K++ +WN++I+A V          CV      F 
Sbjct: 57  STKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVN---QLFS 113

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
                 +R D  T   I+ A      L  G+ VHC   K G   D  +    V++Y++ G
Sbjct: 114 MCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F  M   D  SWN ++SG   N      L     M   G + D ++++S + 
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
             A   ++  G +IH   +K G +   +VS  N+LI+MYS+ G ++ A+  F  M  +D+
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVS--NALINMYSKFGRLQDAQMVFDQMEVRDL 288

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN+II  +  N     A      MQL   + PD+ TVV+L S+ +     R  RS+ G
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQL-GGIRPDLLTVVSLTSIFSQLSDQRISRSILG 347

Query: 303 YAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
           + IRR  L  D+++ N+L++ Y+K   ++ A  +F+ + P  D +SWN++++G  +    
Sbjct: 348 FVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL-PRKDTISWNTLVTGYTQNGLA 406

Query: 358 -------EMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                   M+  C     +  T ++I+P+ +   +L+ G  IH   +K     +      
Sbjct: 407 SEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATC 466

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  CG L  A SL   I  ++    WN +I +   +G  +EA++ FK M  ++   
Sbjct: 467 LIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAER-VK 524

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D +T V+++SAC +  L  EG+                          +C DI      
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQ--------------------------KCFDIMQK--- 555

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            E     +L  + CM+    +     +A EL R++  +P+     ++LSAC         
Sbjct: 556 -EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSAC--------- 605

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC- 647
            +I+G+   LG    +  S  LL++ S    N  +  ++S    + + WE +     +  
Sbjct: 606 -KIYGNA-ELG----TLASDRLLEVDSE---NVGYYVLLSNIYANTEKWEGVIKVRSLAR 656

Query: 648 NSGIRPTK--SSVI 659
           + G+R T   SSV+
Sbjct: 657 DRGLRKTPGWSSVV 670



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 216/462 (46%), Gaps = 15/462 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL+  YS     + +  +F +   KDV +WNAMI+   +N      L   
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D+ T+  I+    Q + +  G ++H   +K G+ +D  + N  +NMY+K 
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F  M   D VSWN+I++    NN P   L +F+ M   G + D +++ S  
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  + L +    + I    I+  + D   V + N+L++MY++ G +  A   F  +  KD
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVV-IGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +SWN ++ G+  NG   EA D  + M+  R   P+  T V++I   +    L++G  +H
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I+  L  D+ +   L+D Y K   L  A  LF  I P +  V WN++I+        
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI-PRDTSVPWNAIIASLGIHGRG 508

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LFK+ML    +    T +++L +C+    ++ G K     Q + G   +      
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           ++ +    G L  A+ L++ +    D S W  ++ AC   G+
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 191/584 (32%), Positives = 299/584 (51%), Gaps = 38/584 (6%)

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           +E A + F  M   D   WN +I GF   G + EA      M +   V+ D  T   +I 
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFTYPFVIK 138

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
             A    L EG+ +H   I+     D+ + NSL+  Y K      AE +F  + P  D+V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM-PERDIV 197

Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           SWNSMISG            LFKEML    +    + ++ L +C+   S + GK IHC  
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257

Query: 395 LKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           ++       + V  +++ MY   G++  A  +   +    +   WN++I    +NG   +
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMIGCYARNGRVTD 316

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A   F+ M++Q    PD +T +N++ A   LE    G+++HG A++        ++ ALI
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALI 372

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            MYG C  +KSA  +F+     N+ +WN +I+A+ QN     ALELF+ L      P+  
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +I SIL A  +   L  G++IH ++    +  N+ I ++L+ MY+ C             
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K   +W+S+I AY  HG G  ++ LF EM  S + P KS+  SLL+ACS SG+VDEG 
Sbjct: 493 LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           +Y+ +M  EY + P  EH+ C++D++GR+G    A  F++ +P  P   +WG++L+A  +
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRN 612

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           H D  + +  AE +FK+E +N G Y+ L NMY   GRW+D   I
Sbjct: 613 HKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 287/573 (50%), Gaps = 28/573 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P  T  L  +++    E +L LF E    D   WN MI         +  + F+  MV  
Sbjct: 65  PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ D+ T   ++ ++  ++ L++G+ +H + IK G ++D  +CN  +++Y K G    +
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  M   D VSWN+++SG L        L+ F+EM   G + D  S  SA+ A + +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                GK IH   ++   E    V V  S++ MYS+ G++  AER F GM  +++V+WN 
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGD-VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +A NG+  +AF    +M     ++PD+ T + L+   A    + EGR++HGYA+RR
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR 359

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                +++  +L+D Y +   L  AE++F+ +A  N ++SWNS+I+             L
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN-VISWNSIIAAYVQNGKNYSALEL 418

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F+E+         +T+ +ILP+     SL  G+ IH + +K  + +NTI +N+L+HMY  
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGDL  A      I    D   WN +I+A   +G  + ++  F  M   +  +P+  T  
Sbjct: 479 CGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-VNPNKSTFA 536

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC- 532
           ++++AC    +  EG   +  ++K   G+D  +++   ++ + GR  +  +A    E   
Sbjct: 537 SLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595

Query: 533 YNCNLCTWNCMISAFSQNK----AEVRALELFR 561
           +      W  +++A   +K    AE  A ++F+
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 205/393 (52%), Gaps = 24/393 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++ +    SL++ Y  +     +  +F E   +D+V+WN+MI+  +        L  F
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
            EM++ G + D  + +  + A + +   K G+ +HC ++++ +   D  +    ++MY+K
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMG-WSGEQADNVSLS 178
            G+++ +E  F+GM   + V+WN +M GC   N       L F++M   +G Q D ++  
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWN-VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + ASA L     G+ IH   ++ G+   P++ +  +LI MY +CG +++AE  F  M 
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGF--LPHMVLETALIDMYGECGQLKSAEVIFDRMA 392

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K+V+SWN+II  +  NGK   A +L  E+    S+ PD  T+ +++   A+SL L EGR
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGR 451

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H Y ++     + +++NSL+  Y+    L  A   FN I  + D+VSWNS+I      
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL-LKDVVSWNSIIMAYAVH 510

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCN 379
                   LF EM+      + ST  ++L +C+
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 1/232 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGFL H+   T+L+  Y      +S+  +F     K+V++WN++I A V+N      L  
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E+ +  +  DSTT+  I+ A  +   L +GR +H   +K+   +++ + N  V+MYA 
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGDL  +   F+ +   D VSWN+I+     + +    +  F EM  S    +  + +S 
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           +AA +  G +  G   +   +K  Y   P +     ++ +  + G+  AA+R
Sbjct: 539 LAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 217/807 (26%), Positives = 375/807 (46%), Gaps = 69/807 (8%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE-----NRCVVMGLHFFGEM 64
            + +L+T YS      S+  +F ++ ++D+VTWN+++ A  +        V+ G   FG +
Sbjct: 649  TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708

Query: 65   VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             E G      TL  ++        ++    VH  ++K G   D  +    VN+Y K G +
Sbjct: 709  REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLV 768

Query: 125  NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
              +   F  M   D V WN ++   + N++ ++ L +F     SG   D  +L   +   
Sbjct: 769  GQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIG-- 826

Query: 185  ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                ++S  +  HA  +K                           A + F      ++ +
Sbjct: 827  GVNSDVSNNRKRHAEQVK-------------------------AYAMKMFPFDQGSNIFA 861

Query: 245  WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            WN  +  F   G+   A D    + L  ++  D  T+V ++S    +  L  G  +H   
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTL-LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920

Query: 305  IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---EMLY 361
            I+      + + NSLM+ YSK+  +  AE  F   +P  DL+SWN+MIS   +   EM  
Sbjct: 921  IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF-INSPELDLISWNTMISSYAQNNLEMEA 979

Query: 362  LCS------------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            +C+            QF+ +++L    + +  E    G  +H + +K G  N++    AL
Sbjct: 980  ICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039

Query: 410  MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            + +Y   G +  A  LL    ++ D + WN ++    ++   ++A++ F S+  +     
Sbjct: 1040 IDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIMFGYIKSNKSRKALEHF-SLMHEMGIPI 1097

Query: 470  DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
            D +TL   I A G L    +GK +   A+K     D  V + ++ MY +C D+ +A  +F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 530  ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                  +   W  MIS + +N  E  AL ++  +     +P+E +  +++ A + L  L 
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 587  HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------WSSMISAYG 631
             GKQIH +V  L +  + F+ ++L+DMY  C S                  W++M+    
Sbjct: 1218 QGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLA 1277

Query: 632  YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             HG   EA+ LF  M ++GI+P K + I +LSACSHSGL  E  +Y++ M + Y + PE 
Sbjct: 1278 QHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEI 1337

Query: 692  EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            EH+ C+VD LGR+G++QEA   I ++P +    ++ A+L AC   GD +  K+VA+ L  
Sbjct: 1338 EHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397

Query: 752  LEPENVGYYISLSNMYVALGRWKDAVE 778
            L+P +   Y+ LSN+Y A  +W D  +
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTD 1424



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 177/689 (25%), Positives = 308/689 (44%), Gaps = 69/689 (10%)

Query: 86   MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
            M  LK G+  H   + +G + D  L N  + MY+KCG L S+   F      D V+WN+I
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 146  MSG------CLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            ++         + N  E   L+   RE G+S      ++L+  +      G +   + +H
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFS---ITRLTLAPLLKLCLLSGFVQVSETVH 740

Query: 198  ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               +K+G+E   +VS   +L+++Y + G +  A   F  M  +D V WN ++  +  N  
Sbjct: 741  GYAVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 258  FEEAFDLLHEMQLMRSVEPDIAT---VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
             +EA              PD +    V+  ++    +   R    V  YA++        
Sbjct: 799  QDEALRFFSAFH-RSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK-------- 849

Query: 315  MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--FKEMLYLCSQFSFSTLL 372
                +  F   SN       +F     + + +    +++ +  FK +L         TL+
Sbjct: 850  ----MFPFDQGSN-------IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 373  AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
             IL +    + L+ G+ IH   +K  F+      N+LM+MY   G + AA       S  
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPE 957

Query: 433  SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC--GNLELAFE- 489
             D   WN +I +  QN    EAI TF+ +  +    PD  TL +V+ AC  G+    F  
Sbjct: 958  LDLISWNTMISSYAQNNLEMEAICTFRDLL-RDGLKPDQFTLASVLRACSTGDEGEYFTL 1016

Query: 490  GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            G  +H  A+K  +  D+ V  ALI +Y +   +  A  +    Y+ +L +WN ++  + +
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076

Query: 550  NKAEVRALE---LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
            +    +ALE   L   +    +EI++ + + A   L  L+ GKQI  +   LGF  + ++
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136

Query: 607  SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            SS +LDMY  C                   AW++MIS Y  +G    A+ ++H M  SG+
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196

Query: 652  RPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHV--CIVDMLGRSGKLQ 708
            +P + +  +L+ A S    +++G Q + N+++ +Y +    +H V   +VDM  + G +Q
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCGSVQ 1252

Query: 709  EAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            +AY   + + ++ K   W AML   + HG
Sbjct: 1253 DAYRVFRKMDVR-KVVFWNAMLLGLAQHG 1280



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 182/356 (51%), Gaps = 7/356 (1%)

Query: 3    FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            F   +P S SL+  YS      ++   F  +   D+++WN MI++  +N   +  +  F 
Sbjct: 925  FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFR 984

Query: 63   EMVEEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +++ +G++ D  TL  ++ A +   +      G  VH  +IK G+I DS +    +++Y+
Sbjct: 985  DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044

Query: 120  KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            K G ++ +E    G +  D  SWN IM G + +N   K L +F  M   G   D ++L++
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104

Query: 180  AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A+ AS CL  L  GK I A  IKLG+ +  +VS  + ++ MY +CGD+  A   F  ++ 
Sbjct: 1105 AIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS--SGVLDMYIKCGDMPNALELFGEISR 1162

Query: 240  KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
             D V+W  +I G+  NG  + A  + H M++   V+PD  T  TLI   +    L +G+ 
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRV-SGVQPDEYTFATLIKASSCLTALEQGKQ 1221

Query: 300  VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            +H   ++     D  +  SL+D Y K  S+  A  +F  +  +  +V WN+M+ GL
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM-DVRKVVFWNAMLLGL 1276



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 4/262 (1%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   L  S+ +L  Y       ++L LF E    D V W  MI+  +EN      L  +
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY 1188

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
              M   G++ D  T   ++ A + +  L+QG+ +H   +K     D  +    V+MY KC
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G +  +   F  M     V WN ++ G   + + ++ L  FR M  +G Q D V+    +
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 182  AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A +  G  S   K   A+    G   +P +   + L+    + G I+ AE     M  K
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGI--TPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366

Query: 241  DVVS-WNAIIDGFALNGKFEEA 261
               S + A++      G  E A
Sbjct: 1367 ASASMYRALLGACRTKGDAETA 1388



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A  +L+L   GK  H   + S    D  + N LITMY +C  + SA  VF+   + +L T
Sbjct: 623 AMADLKL---GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 540 WNCMISAFSQ-------NKAE-VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
           WN +++A++Q       N  E  R   L R   F    +++  +L  C   G ++  + +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCK-----------------SNAAWSSMISAYGYHG 634
           HG+   +GF+ + F+S AL+++Y  CK                     W+ M+ AY  + 
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIY--CKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 635 KGWEAIELFHEMCNSGIRPTKSSV 658
              EA+  F     SG  P  S++
Sbjct: 798 FQDEALRFFSAFHRSGFXPDFSNL 821


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 189/621 (30%), Positives = 327/621 (52%), Gaps = 43/621 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +HAL +  G   S  + ++  LI++Y   GDI  +   F  +  K++ SWN+II  + 
Sbjct: 39  KKLHALLLVFG--KSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYV 96

Query: 254 LNGKFEEAFDLLHEMQLM---RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
             GK+ EA + ++++  M     + PD  T   ++  C     L +G+ VH    +    
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFE 153

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+ +  SL+  YS+   L  A  +F  + P+ D+ SWN+MISG            +   
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDM-PVKDVGSWNAMISGFCQNGNAAGALGVLNR 212

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T+ +ILP C   + +  G  IH   LK G  ++    NAL++MY   G 
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +  ++    D   WN +I A  QN     A++ FK M Q     PD +T+V++ 
Sbjct: 273 LQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGM-QLGGIRPDLLTVVSLT 330

Query: 479 SACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           S    L      +S+ G  ++   +  D  + NAL+ MY +   +  A TVF+     + 
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHG 593
            +WN +++ ++QN     A++ +  +E      PN+ + VSI+ A + +G L+ G +IH 
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            +       + F+++ L+D+Y  C                ++  W+++I++ G HG+G E
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A++LF +M    ++    + +SLLSACSHSGLVDEG + ++ M +EY ++P  +H+ C+V
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMV 570

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR+G L++AYE ++N+PIQP   +WGA+LSAC  +G+ ++G   ++ L +++ ENVG
Sbjct: 571 DLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVG 630

Query: 759 YYISLSNMYVALGRWKDAVEI 779
           YY+ LSN+Y    +W+  +++
Sbjct: 631 YYVLLSNIYANTEKWEGVIKV 651



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 291/611 (47%), Gaps = 46/611 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH- 151
           + +H L +  G   +  L    +N+Y   GD++ S  TF  +H  +  SWN+I+S  +  
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 152 NNYPE--KCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             Y E   C+     M   G  + D  +    + A   L +   GK +H    K+G+ED 
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDD 155

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V+   SL+ +YS+ G ++ A + F  M  KDV SWNA+I GF  NG    A  +L+ M
Sbjct: 156 VFVAA--SLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V+ D  TV +++ +CA S  +  G  +H + ++  L  D+ + N+L++ YSK   
Sbjct: 214 K-GEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGR 272

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A+++F+ +  + DLVSWNS+I+              FK M     +    T++++  
Sbjct: 273 LQDAQMVFDQME-VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDT 435
             +        +SI  + ++  + +  + + NAL++MY   G +  A ++  ++    DT
Sbjct: 332 IFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DT 390

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN ++   TQNG   EAI  +  M + ++  P+  T V++I A  ++    +G  +H 
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             +K+ + LD  V   LI +YG+C  ++ A ++F          WN +I++   +     
Sbjct: 451 KLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEE 510

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL+LF+ +     + + I+ VS+LSAC+  G++  G++     F +  Q+   I  +L  
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK----CFDI-MQKEYGIKPSL-- 563

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                K       ++   GY  K +E +       N  I+P  S   +LLSAC   G  +
Sbjct: 564 -----KHYGCMVDLLGRAGYLEKAYELVR------NMPIQPDASIWGALLSACKIYGNAE 612

Query: 673 EGLQYYNNMLE 683
            G    + +LE
Sbjct: 613 LGTLASDRLLE 623



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 175/674 (25%), Positives = 299/674 (44%), Gaps = 84/674 (12%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE-------NRCVVMGLHFFG 62
           ST L+  Y        S + F     K++ +WN++I+A V          CV      F 
Sbjct: 57  STKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVN---QLFS 113

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
                 +R D  T   I+ A      L  G+ VHC   K G   D  +    V++Y++ G
Sbjct: 114 MCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYG 170

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F  M   D  SWN ++SG   N      L     M   G + D ++++S + 
Sbjct: 171 VLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILP 230

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
             A   ++  G +IH   +K G +   +VS  N+LI+MYS+ G ++ A+  F  M  +D+
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVS--NALINMYSKFGRLQDAQMVFDQMEVRDL 288

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN+II  +  N     A      MQL   + PD+ TVV+L S+ +     R  RS+ G
Sbjct: 289 VSWNSIIAAYEQNNDPSTALRFFKGMQL-GGIRPDLLTVVSLTSIFSQLSDQRISRSILG 347

Query: 303 YAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
           + IRR  L  D+++ N+L++ Y+K   ++ A  +F+ + P  D +SWN++++G  +    
Sbjct: 348 FVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL-PRKDTISWNTLVTGYTQNGLA 406

Query: 358 -------EMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                   M+  C     +  T ++I+P+ +   +L+ G  IH   +K     +      
Sbjct: 407 SEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATC 466

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  CG L  A SL   I  ++    WN +I +   +G  +EA++ FK M  ++   
Sbjct: 467 LIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAER-VK 524

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D +T V+++SAC +  L  EG+                          +C DI      
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQ--------------------------KCFDIMQK--- 555

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            E     +L  + CM+    +     +A EL R++  +P+     ++LSAC         
Sbjct: 556 -EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSAC--------- 605

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC- 647
            +I+G+   LG    +  S  LL++ S    N  +  ++S    + + WE +     +  
Sbjct: 606 -KIYGNA-ELG----TLASDRLLEVDSE---NVGYYVLLSNIYANTEKWEGVIKVRSLAR 656

Query: 648 NSGIRPTK--SSVI 659
           + G+R T   SSV+
Sbjct: 657 DRGLRKTPGWSSVV 670



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 216/462 (46%), Gaps = 15/462 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL+  YS     + +  +F +   KDV +WNAMI+   +N      L   
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D+ T+  I+    Q + +  G ++H   +K G+ +D  + N  +NMY+K 
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F  M   D VSWN+I++    NN P   L +F+ M   G + D +++ S  
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  + L +    + I    I+  + D   V + N+L++MY++ G +  A   F  +  KD
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVV-IGNALVNMYAKLGYMNCAHTVFDQLPRKD 389

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +SWN ++ G+  NG   EA D  + M+  R   P+  T V++I   +    L++G  +H
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I+  L  D+ +   L+D Y K   L  A  LF  I P +  V WN++I+        
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI-PRDTSVPWNAIIASLGIHGRG 508

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LFK+ML    +    T +++L +C+    ++ G K     Q + G   +      
Sbjct: 509 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 568

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           ++ +    G L  A+ L++ +    D S W  ++ AC   G+
Sbjct: 569 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGN 610


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 200/653 (30%), Positives = 338/653 (51%), Gaps = 44/653 (6%)

Query: 163 REMGWSGEQADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDS---PYVSVTNSLI 218
           R   W+G +A N VS+   V  +     L     I A  I+     S    YV +T + +
Sbjct: 36  RANSWAGLEASNEVSVVLWVKFAVGTRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFL 95

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
             Y + G I  A+  F  M  +DVVSWNA+I G++ NG   +A ++  +M L     P  
Sbjct: 96  DFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQM-LREGFPPCQ 154

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T+V L+  C    ++ +G+++HG+ I+  L  D  + N+L   Y+K   L  AE+LF  
Sbjct: 155 RTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEE 214

Query: 339 IAPMNDLVSWNSMI-----SGLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEF 386
           I    + VSWN+MI     +GLF E + +  Q        ++ T++++L S N+      
Sbjct: 215 IFEKTE-VSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLL-SANAHLD--- 269

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
             S HC+ +K GF+ +   + +L+  Y  CG++ +A  LL  +    +      +I    
Sbjct: 270 --STHCYVIKTGFATDASVITSLVCSYAGCGNIESA-GLLYNLMPQRNLVSLTAMISGYA 326

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           + G+    ++ F  M Q +   PD+V +V+++    +      G  +H   LK+ +  D 
Sbjct: 327 EKGNMGLVVECFTQMLQLK-MKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADC 385

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHL 563
            V N LI+MY +  DI++  ++F       L +WN +ISA  Q      A+ELF   R  
Sbjct: 386 LVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMY 445

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN--- 620
              P+ I+I S+L+ C+++G L+ G+++H +V         F+ +AL+DMY  C      
Sbjct: 446 GHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESA 505

Query: 621 ------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                       A W++MIS YG  G    A+  + EM   G++P + + + +LSAC+H 
Sbjct: 506 ERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHG 565

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GLV EG +Y+ +M E++ + P  +H+ C+VD+L R+G L+EA  F+KN+ ++P   +WGA
Sbjct: 566 GLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGA 625

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +L++C  H + K+G+ +A+ L  L+  + G Y+ +SN+Y + GRW D   + K
Sbjct: 626 LLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRK 678



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/505 (31%), Positives = 251/505 (49%), Gaps = 27/505 (5%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K+G      L   F++ Y K G +  ++  F  M   D VSWN ++ G   N Y    L 
Sbjct: 81  KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 140

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            F +M   G      +L   V +      +  GK IH  GIK G +      V N+L SM
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLD--CRVKNALTSM 198

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y++C D++AAE  F  +  K  VSWN +I  +  NG F+EA  +  +MQ  R VE +  T
Sbjct: 199 YAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKER-VEVNYVT 257

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +++L+S  A++ L     S H Y I+     D  ++ SL+  Y+   ++  A LL+N + 
Sbjct: 258 IISLLS--ANAHL----DSTHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYN-LM 310

Query: 341 PMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
           P  +LVS  +MISG             F +ML L  +     +++IL     P  +  G 
Sbjct: 311 PQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGL 370

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            IH + LK G   + + VN L+ MY   GD+   FSL   +      S WN VI AC Q 
Sbjct: 371 GIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLIS-WNSVISACIQV 429

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G   +A++ F  M +    SPD++T+ ++++ C  +     G+ LH   L++ + ++  +
Sbjct: 430 GRTSDAMELFCQM-RMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFL 488

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
           + AL+ MY +C  ++SA  VF+S     L TWN MIS +  +  E RAL  +  ++    
Sbjct: 489 ETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGL 548

Query: 566 EPNEISIVSILSACTQLGVLRHGKQ 590
           +P+ I+ + +LSACT  G++  GK+
Sbjct: 549 KPDRITFLGVLSACTHGGLVWEGKR 573



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 240/502 (47%), Gaps = 24/502 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  +T+ L  Y  +     +  LF E   +DVV+WNA+I     N      L  F
Sbjct: 83  GFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVF 142

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ EG      TL+ +V +  + + + QG+ +H   IK+G+  D  + N   +MYAKC
Sbjct: 143 VQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKC 202

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL ++E  F  +     VSWNT++     N   ++ +L F++M     + + V++ S +
Sbjct: 203 ADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLL 262

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+A L         H   IK G+      SV  SL+  Y+ CG+IE+A   +  M  ++
Sbjct: 263 SANAHLDS------THCYVIKTGFATD--ASVITSLVCSYAGCGNIESAGLLYNLMPQRN 314

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VS  A+I G+A  G      +   +M L   ++PD   +V+++    D   +  G  +H
Sbjct: 315 LVSLTAMISGYAEKGNMGLVVECFTQM-LQLKMKPDAVAMVSILHGFTDPTFIGSGLGIH 373

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y ++  L  D L++N L+  YSK   +     LF+ +     L+SWNS+IS        
Sbjct: 374 AYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGE-KQLISWNSVISACIQVGRT 432

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +M          T+ ++L  C+    L+FG+ +H + L+           AL
Sbjct: 433 SDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETAL 492

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MYI CG L +A  + + I      + WN +I     +GH   A+  +  M Q+Q   P
Sbjct: 493 VDMYIKCGRLESAERVFKSIKEPC-LATWNTMISGYGLSGHEHRALSCYSEM-QEQGLKP 550

Query: 470 DSVTLVNVISACGNLELAFEGK 491
           D +T + V+SAC +  L +EGK
Sbjct: 551 DRITFLGVLSACTHGGLVWEGK 572


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 177/592 (29%), Positives = 311/592 (52%), Gaps = 40/592 (6%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY +CG +  A   F  +   + VSW  I+  FA NG + EA      M ++  + PD A
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRM-VLEGLRPDGA 59

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
             V  I +C+ S  L++G+ +H   +  RLL +D+++  +L+  Y++   L  A   F+ 
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 339 IAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF------------ 386
           +     LV+WN++I+G  +   +  +   +  +++  P    P+++ F            
Sbjct: 120 MGKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178

Query: 387 ---GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
              G+ I    +  G+++++I  NAL++MY  CG L +A  +  R+  N D   WN +I 
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMIS 237

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              + G   +A++ F+ M    +  P+ VT + +++AC NLE   +G+++H    +    
Sbjct: 238 GYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296

Query: 504 LDTRVQNALITMYGRCRD-IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            D  + N L+ MY +C   ++ A  VFE     ++ TWN +I A+ Q      AL++F+ 
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           ++ E   PNEI++ ++LSAC  LG  R GK +H  +     + +  + ++L++MY+ C  
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        KS  +WS++I+AY  HG     +E F E+   G+     +++S LSA
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH G++ EG+Q + +M+ ++ + P+  H +C+VD+L R+G+L+ A   I ++P  P   
Sbjct: 477 CSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKD 775
            W ++LS C  H DTK   +VA+ LF+LE E+    ++ LSN+Y   GRW D
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD 588



 Score =  235 bits (599), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 255/492 (51%), Gaps = 22/492 (4%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCG +  +   F  +   ++VSW  I++    N +  + L Y+R M   G + D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              A+   +   +L  G+++HA+ ++    +   + +  +LI+MY++C D+E A + F  
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDII-LGTALITMYARCRDLELARKTFDE 119

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLL 294
           M  K +V+WNA+I G++ NG    A  +  +M  +    ++PD  T  + +  C     +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +GR +    +      D ++ N+L++ YSK  SL  A  +F+ +    D+++WN+MISG
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISG 238

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       LF+ M     + +  T + +L +C + E LE G++IH    + G+ ++
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298

Query: 403 TIGVNALMHMYINC-GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            +  N L++MY  C   L  A  + +R+    D   WNI+IVA  Q G  ++A+  FK M
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERM-RTRDVITWNILIVAYVQYGQAKDALDIFKQM 357

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q +N +P+ +TL NV+SAC  L    +GK++H L        D  ++N+L+ MY RC  
Sbjct: 358 -QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           +     VF +  + +L +W+ +I+A++Q+      LE F  L  E    +++++VS LSA
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476

Query: 579 CTQLGVLRHGKQ 590
           C+  G+L+ G Q
Sbjct: 477 CSHGGMLKEGVQ 488



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 289/618 (46%), Gaps = 57/618 (9%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y        +LA+F+   + + V+W  ++ A   N      L ++  MV EG+R D    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           ++ +   +    LKQG+++H + ++  ++  D  L    + MYA+C DL  +  TF  M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLSSAVAASACLGELSY 192
               V+WN +++G   N      L  +++M      G + D ++ SSA+ A   +G++S 
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ I A  +  GY     V   N+LI+MYS+CG +E+A + F  +  +DV++WN +I G+
Sbjct: 182 GREIEARTVASGYASDSIVQ--NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY- 311
           A  G   +A +L   M      +P++ T + L++ C +   L +GR++H     R  GY 
Sbjct: 240 AKQGAATQALELFQRMG-PNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKV--REDGYE 296

Query: 312 -DLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
            DL++ N L++ Y+K S+SL +A  +F  +    D+++WN +I      G  K+ L +  
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMR-TRDVITWNILIVAYVQYGQAKDALDIFK 355

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q           TL  +L +C    +   GK++H          + +  N+LM+MY  CG
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L     +   I   S  S W+ +I A  Q+GH +  ++ F  + Q+  A+ D VT+V+ 
Sbjct: 416 SLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTGLEHFWELLQEGLAA-DDVTMVST 473

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC            HG  LK   G+ T +  +++  +G   D +              
Sbjct: 474 LSACS-----------HGGMLKE--GVQTFL--SMVGDHGLAPDYRH------------- 505

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             + CM+   S+      A  L   + F P+ ++  S+LS C      +   ++   +F 
Sbjct: 506 --FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563

Query: 598 LGFQENSFISSALLDMYS 615
           L  ++     + L ++Y+
Sbjct: 564 LESEDEHSTVTLLSNVYA 581



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 225/485 (46%), Gaps = 68/485 (14%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV---EE 67
           T+L+T Y+     E +   F E   K +VTWNA+I     N      L  + +MV    E
Sbjct: 98  TALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE 157

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ D+ T    + A T +  + QGR +   ++ +G  +DS + N  +NMY+KCG L S+
Sbjct: 158 GMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESA 217

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   D ++WNT++SG        + L  F+ MG +  + + V+    + A   L
Sbjct: 218 RKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWN 246
            +L  G+ IH    + GYE    + + N L++MY++C   +E A + F  M  +DV++WN
Sbjct: 278 EDLEQGRAIHRKVREDGYESD--LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWN 335

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I  +   G+ ++A D+  +MQL  +V P+  T+  ++S CA     R+G++VH     
Sbjct: 336 ILIVAYVQYGQAKDALDIFKQMQL-ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
                D+++ NSLM+ Y++  SL     +F AI     LVSW+++I+             
Sbjct: 395 GRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD-KSLVSWSTLIA------------- 440

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
                 A     +S   LE     H W+ L+ G + + +              +V+  S 
Sbjct: 441 ------AYAQHGHSRTGLE-----HFWELLQEGLAADDV-------------TMVSTLS- 475

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACG 482
                             AC+  G  +E ++TF SM      +PD    + +V+++S  G
Sbjct: 476 ------------------ACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAG 517

Query: 483 NLELA 487
            LE A
Sbjct: 518 RLEAA 522



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 17/361 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ +      +L+  YS     ES+  +F    N+DV+ WN MI+   +       L  F
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M     + +  T + +++A T +  L+QGR +H    + G  +D  + NV +NMY KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKC 312

Query: 122 -GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L  +   F  M   D ++WN ++   +     +  L  F++M       + ++LS+ 
Sbjct: 313 SSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A LG    GK +HAL I  G   +  V + NSL++MY++CG ++     F  +  K
Sbjct: 373 LSACAVLGAKRQGKAVHAL-IASGRCKADVV-LENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +VSW+ +I  +A +G      +   E+ L   +  D  T+V+ +S C+   +L+EG   
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWEL-LQEGLAADDVTMVSTLSACSHGGMLKEGVQT 489

Query: 301 -------HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
                  HG      L  D      ++D  S++  L  AE L + +  + D V+W S++S
Sbjct: 490 FLSMVGDHG------LAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLS 543

Query: 354 G 354
           G
Sbjct: 544 G 544



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 5/287 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSY-FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G+ + L     LL  Y+  S   E +  +F     +DV+TWN +I A V+       L  
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDI 353

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  E +  +  TL  ++SA   +   +QG+ VH L       AD  L N  +NMY +
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR 413

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ +   F+ +     VSW+T+++    + +    L +F E+   G  AD+V++ S 
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           ++A +  G L  G V   L +   +  +P       ++ + S+ G +EAAE     M   
Sbjct: 474 LSACSHGGMLKEG-VQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            D V+W +++ G  L+   + A  +  ++  + S   D  + VTL+S
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELES--EDEHSTVTLLS 577


>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 191/606 (31%), Positives = 312/606 (51%), Gaps = 32/606 (5%)

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           IK G++   YVS   + + +YS+ G ++AA+R F     KDVVSWNA+I G+   G   +
Sbjct: 90  IKWGFDQFLYVS--TAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHD 147

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L  EM+  R  +P   T+V+L+  C    L  +G+S+HG  ++  L  D  + N+L+
Sbjct: 148 AFKLFVEMR-RREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALV 206

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNS 380
             Y K   L   +LLF  I     +VSWN+MI    +  L+  +   F  +L    + NS
Sbjct: 207 SMYGKCADLDGVKLLFGEITE-KSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANS 265

Query: 381 PESLEFGKS------IHCWQLKLGFSNNTIGVNALMHMYINCGDL-VAAFSLLQRISHNS 433
              +    +      IHC+  K+G   N   V +L+  Y+ CG + +A    + ++  N 
Sbjct: 266 VTMVSILSANANTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKN- 324

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
                  +I    + G     ++ + S+ Q  +   D+V +V +I      +    G + 
Sbjct: 325 -LVALTAIISHYAEKGDMGSVVRLY-SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAF 382

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG  +KS + +D  V N  I+MY +  +I +  ++F+  +   L +WN +IS+ +Q    
Sbjct: 383 HGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRS 442

Query: 554 VRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
           + A+ LF  +    + P+ I++ S+LSAC Q G L  G+ +H ++         F+ +AL
Sbjct: 443 IDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTAL 502

Query: 611 LDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C                  A+W+S+IS YG  G    A+  + EM   GI+P K
Sbjct: 503 VDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNK 562

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +   +L+AC+H GLV+EG +Y+  M +++ + PE++H   +V MLGR+G  +EA  FI+
Sbjct: 563 ITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQ 622

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           N+   P   VWGA+LSAC  H + K+G+ VA+ LF     N G+++ +SN+Y A  RW D
Sbjct: 623 NMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVLMSNLYAASRRWND 682

Query: 776 AVEIGK 781
              I K
Sbjct: 683 VARIRK 688



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 257/560 (45%), Gaps = 28/560 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  ST+ L  YS + + +++  LF +   KDVV+WNA+I+              F
Sbjct: 93  GFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM          TL+ ++ +        QG+ +H L +KAG+  DS + N  V+MY KC
Sbjct: 153 VEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKC 212

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+  +  F  +     VSWNT++     N    + +L F++M      A++V++ S +
Sbjct: 213 ADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSIL 272

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+A  G       IH    K+G  ++  VSV  SL+  Y +CG IE AE  +     K+
Sbjct: 273 SANANTG------CIHCYATKIGLVEN--VSVVTSLVCSYVKCGYIELAELIYMSKLKKN 324

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+  AII  +A  G       L   +Q +  ++ D   +V +I        +  G + H
Sbjct: 325 LVALTAIISHYAEKGDMGSVVRLYSIVQHL-DMKLDAVAMVGIIQGFTYPDHIGIGLAFH 383

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           GY ++  L  D L+ N  +  YSK +++     LF  +     L SWNS+IS     G  
Sbjct: 384 GYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHK-KTLSSWNSVISSCAQAGRS 442

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            + + L SQ + S       TL ++L +C    +L FG+ +HC+ L+           AL
Sbjct: 443 IDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTAL 502

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY+ CG +  A ++ + +      S WN +I      G    A+  +  M  ++   P
Sbjct: 503 VDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLISGYGLFGFHNHALLCYTEM-MEKGIKP 560

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
           + +T   +++AC +  L  EG+    + +K   G+    Q+  +++ M GR    + A  
Sbjct: 561 NKITFSGILAACTHGGLVEEGRKYFKI-MKKKFGIVPESQHCASMVGMLGRAGLFEEAIV 619

Query: 528 VFESC-YNCNLCTWNCMISA 546
             ++   N +   W  ++SA
Sbjct: 620 FIQNMETNPDSAVWGALLSA 639


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 313/597 (52%), Gaps = 37/597 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V   L+  YS    +EAA   F        +  NA++ G+  +G++ E  +L   M+  R
Sbjct: 66  VATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR-SR 124

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           ++E D  +    +  CA SL    G  +   A+ + +  +  + +S++ F  K   + +A
Sbjct: 125 NLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEA 184

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
           + +F+ + P  D+V WNS+I G            LF EM     + S  T+ +++ +C  
Sbjct: 185 QRVFDGM-PNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGG 243

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +L+ GK +H + L LG  N+ + + + + MY   GD+ +A  +  ++   +  S WN 
Sbjct: 244 IGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVS-WNA 302

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I  C +NG   E+   F  + +      D  T+V+++  C        GK LHG A++S
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGF-DLTTIVSLLQGCSQTASLATGKILHGCAIRS 361

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               +  +  A++ +Y +C  +K A+ VF    + N+ TW  M+   +QN     AL LF
Sbjct: 362 FES-NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             ++ E    N ++ VS++ +C  LG L+ G+ IHGH+F LGF  +    +AL+DMY+ C
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKC 480

Query: 618 ----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
                           K    W+SMI+ YG HG G++A+ ++H+M   G++P +++ +SL
Sbjct: 481 GKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSL 540

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHS LV++G+  +N+M  ++++RP  +H+ C+VD+L R+G+ +EA   I+ +P QP
Sbjct: 541 LSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQP 600

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
              V  A+LS C  H +  +G Q ++ L  L+  N G YI LSN+Y    RW D V+
Sbjct: 601 GTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRW-DKVD 656



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 252/500 (50%), Gaps = 24/500 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T L+ AYS++   E++  +F +      +  NAM+   +++      L  FG M    
Sbjct: 66  VATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRN 125

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  DS +    + A       + G  +   +++ GM  +  + +  ++   K G +  ++
Sbjct: 126 LEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQ 185

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F GM   D V WN+I+ G +     +     F EM  SG +   ++++S + A   +G
Sbjct: 186 RVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIG 245

Query: 189 ELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            L  GK +H   LG+ LG +    + V  S + MYS+ GDIE+A   F+ M  +++VSWN
Sbjct: 246 NLKLGKCMHGYVLGLGLGND----ILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWN 301

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAI 305
           A+I G   NG   E+FDL H  +L+RS    D+ T+V+L+  C+ +  L  G+ +HG AI
Sbjct: 302 AMISGCVRNGLVGESFDLFH--RLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAI 359

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
           R     +L++  +++D YSK  SL +A  +FN +   N +++W +M+ GL +     + L
Sbjct: 360 RSFES-NLILSTAIVDLYSKCGSLKQATFVFNRMKDRN-VITWTAMLVGLAQNGHAEDAL 417

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L +Q           T ++++ SC    SL+ G+SIH    +LGF+ + + + AL+ MY
Sbjct: 418 RLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMY 477

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +    S + D   WN +I     +GH  +A+  +  M  ++   P+  T
Sbjct: 478 AKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMI-EEGLKPNQTT 536

Query: 474 LVNVISACGNLELAFEGKSL 493
            ++++SAC +  L  +G SL
Sbjct: 537 FLSLLSACSHSRLVEQGISL 556



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 37/289 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F ++L  ST+++  YS     + +  +F    +++V+TW AM+    +N      L  
Sbjct: 360 RSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRL 419

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M EEGI  +S T + +V +   +  LK+GR +H    + G   D       V+MYAK
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAK 479

Query: 121 CGDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG +N +E  FS G    D V WN++++G   + +  + +  + +M   G + +  +  S
Sbjct: 480 CGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLS 539

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A +           H+  ++ G      +S+ NS+     +  +I   E+ +    C
Sbjct: 540 LLSACS-----------HSRLVEQG------ISLFNSM----ERDHNIRPIEKHY---AC 575

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
                   ++D  +  G+FEEA  L+ +M      +P  A +  L+S C
Sbjct: 576 --------LVDLLSRAGRFEEAQALIEKMPF----QPGTAVLEALLSGC 612



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 28/269 (10%)

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           KS H   + + +  D  V   L+  Y   R +++A  VF+  +       N M+  + Q+
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 551 KAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                 LELF   R    E +  S    L AC        G +I       G ++N F+ 
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168

Query: 608 SALL----------------DMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           S+++                D   N K    W+S+I  Y   G    A +LF EM  SGI
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPN-KDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGI 227

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQ 708
           +P+  ++ SL+ AC   G +  G   +  +L      D+   T      VDM  + G ++
Sbjct: 228 KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS----FVDMYSKMGDIE 283

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            A      +P +     W AM+S C  +G
Sbjct: 284 SARWVFYKMPTRNLVS-WNAMISGCVRNG 311


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 231/814 (28%), Positives = 388/814 (47%), Gaps = 86/814 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+  Y+      ++  +F      D + W++MI       C    L  F
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G   D  TL+ I+S L                                   A  
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTL-----------------------------------ASS 272

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +      M    TV+WN ++SG   +      L  +++M   G      + +S +
Sbjct: 273 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 332

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
           +A+A +     G+ +HA  +  G + + +V   +SLI++Y++CG    A+  F  ++C K
Sbjct: 333 SAAANMKAFVEGQQMHAAAVMHGLDANVFVG--SSLINLYAKCGCPSDAKNVF-DLSCEK 389

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++V WNA++ GF  N   EEA  +   M +  +++ D  T V+++  C        G+ V
Sbjct: 390 NIVMWNAMLTGFVQNELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---FK 357
           H   I+  +   L + N+ +D YSK  ++  A+ LF+ I P  D +SWN++  GL    +
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI-PYKDSISWNALTVGLAQNLE 507

Query: 358 EMLYLC------------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTI 404
           E   +C               SFST    + +C++  + E GK IHC  +K G  SN+ +
Sbjct: 508 EEEAVCMLKRMRLHGITPDDVSFST---AINACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G ++L+ +Y   GD+ ++  +  ++  +S     N +I    QN +  EAI+ F+ + + 
Sbjct: 565 G-SSLIDLYSKHGDVESSRKIFAQVDASSIVPI-NALIAGFVQNNNEDEAIQLFQQVLKD 622

Query: 465 QNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDI 522
               P SVT  +++S C G+L  A  GK +H   LKS ++  DT +  +L  +Y + + +
Sbjct: 623 -GLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 680

Query: 523 KSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           + A+ +  E   + NL  W  +IS ++QN     +L  F   RH     +E +  S+L A
Sbjct: 681 EDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKA 740

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAA 622
           C+ +     GK+IHG +   GF      +SAL+DMYS C                +    
Sbjct: 741 CSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMP 800

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMI  +  +G   EA+ LF +M    I+P + + + +L AC+HSGL+ EG  ++ +M 
Sbjct: 801 WNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMR 860

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           + Y + P  +H+ C +D+LGR G LQEA E I  LP +P   VW   L+AC  H D + G
Sbjct: 861 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERG 920

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           K  A  L +LEP+    Y+ LS+++ A G W +A
Sbjct: 921 KIAARKLVELEPQYSSTYVLLSSLHAATGNWAEA 954



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 178/706 (25%), Positives = 323/706 (45%), Gaps = 82/706 (11%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGDLNS 126
           G R D   L +++SA +++  L  GR VHC  +K+G  + S  C    V+MYAKCGD+ +
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPN 211

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F G+ C DT+ W+++++ C H     ++ L  F  M   G   D V+L        
Sbjct: 212 ARRVFDGIACPDTICWSSMIA-CYHRVGCYQEALALFSRMDKMGSAPDQVTLV------- 263

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
                                         ++IS  +  G ++ A      M     V+W
Sbjct: 264 ------------------------------TIISTLASSGRLDHATALLKKMPTPSTVAW 293

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           NA+I G A +G     F++L   + MRS  + P  +T  +++S  A+     EG+ +H  
Sbjct: 294 NAVISGHAQSGL---EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAA 350

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+   L  ++ + +SL++ Y+K    S A+ +F+ ++   ++V WN+M++G         
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEE 409

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F+ M+    Q    T ++IL +C    S   GK +HC  +K     +    NA + 
Sbjct: 410 AIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLD 469

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G +  A +L   I +  D+  WN + V   QN   +EA+   K M +    +PD 
Sbjct: 470 MYSKYGAIGDAKALFSLIPYK-DSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDD 527

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           V+    I+AC N+     GK +H LA+K  +  +  V ++LI +Y +  D++S+  +F  
Sbjct: 528 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 587

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               ++   N +I+ F QN  E  A++LF+ +     +P+ ++  SILS C+       G
Sbjct: 588 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 647

Query: 589 KQIHGHVFHLG-FQENSFISSALLDMY----------------SNCKSNAAWSSMISAYG 631
           KQ+H +    G   +++ +  +L  +Y                 + K+   W+++IS Y 
Sbjct: 648 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 707

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G G  ++  F  M +  +R  +++  S+L ACS      +G + +  + +      ET
Sbjct: 708 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYET 767

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                ++DM  + G +  ++E  K L  +     W +M+   + +G
Sbjct: 768 ATSA-LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 812



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 163/667 (24%), Positives = 307/667 (46%), Gaps = 54/667 (8%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS--SECTFSGMHCADTVSWNTIMSGCL 150
           R +H   ++ G      L +  V +Y K G +    S   ++G   +   S  +++S   
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAAS--SLLSCHA 133

Query: 151 HNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
            +  P   L  FR +   +G + D   L+  ++A + +G L+YG+ +H   +K G+  S 
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +     +L+ MY++CGD+  A R F G+ C D + W+++I  +   G ++EA  L   M 
Sbjct: 194 FCEA--ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA-IRRLLGYDLLMMNSLMDFYSKSNS 328
            M S  PD  T+VT+IS  A S     GR  H  A ++++     +  N+++  +++S  
Sbjct: 252 KMGSA-PDQVTLVTIISTLASS-----GRLDHATALLKKMPTPSTVAWNAVISGHAQSG- 304

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
                L FN +    D+ SW     GL+          + ST  ++L +  + ++   G+
Sbjct: 305 -----LEFNVLGLYKDMRSW-----GLWP---------TRSTFASMLSAAANMKAFVEGQ 345

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H   +  G   N    ++L+++Y  CG    A ++   +S   +   WN ++    QN
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQN 404

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
              +EAI+ F+ M  +     D  T V+++ AC  L   + GK +H + +K+ M +   V
Sbjct: 405 ELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-- 566
            NA + MY +   I  A  +F      +  +WN +    +QN  E  A+ + + +     
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 567 -PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------- 615
            P+++S  + ++AC+ +     GKQIH      G   N  + S+L+D+YS          
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 616 -----NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                +  S    +++I+ +  +    EAI+LF ++   G++P+  +  S+LS CS S  
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
              G Q +   L+   +  +T   V +  +  +S  L++A + +  +P       W A++
Sbjct: 644 SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 703

Query: 731 SACSHHG 737
           S  + +G
Sbjct: 704 SGYAQNG 710


>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 191/606 (31%), Positives = 312/606 (51%), Gaps = 32/606 (5%)

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           IK G++   YVS   + + +YS+ G ++AA+R F     KDVVSWNA+I G+   G   +
Sbjct: 90  IKWGFDQFLYVS--TAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHD 147

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L  EM+  R  +P   T+V+L+  C    L  +G+S+HG  ++  L  D  + N+L+
Sbjct: 148 AFKLFVEMR-RREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALV 206

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNS 380
             Y K   L   +LLF  I     +VSWN+MI    +  L+  +   F  +L    + NS
Sbjct: 207 SMYGKCADLDGVKLLFGEITE-KSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANS 265

Query: 381 PESLEFGKS------IHCWQLKLGFSNNTIGVNALMHMYINCGDL-VAAFSLLQRISHNS 433
              +    +      IHC+  K+G   N   V +L+  Y+ CG + +A    + ++  N 
Sbjct: 266 VTMVSILSANANTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKN- 324

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
                  +I    + G     ++ + S+ Q  +   D+V +V +I      +    G + 
Sbjct: 325 -LVALTAIISHYAEKGDMGSVVRLY-SIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAF 382

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG  +KS + +D  V N  I+MY +  +I +  ++F+  +   L +WN +IS+ +Q    
Sbjct: 383 HGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRS 442

Query: 554 VRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
           + A+ LF  +    + P+ I++ S+LSAC Q G L  G+ +H ++         F+ +AL
Sbjct: 443 IDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTAL 502

Query: 611 LDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C                  A+W+S+IS YG  G    A+  + EM   GI+P K
Sbjct: 503 VDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNK 562

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +   +L+AC+H GLV+EG +Y+  M +++ + PE++H   +V MLGR+G  +EA  FI+
Sbjct: 563 ITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQ 622

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           N+   P   VWGA+LSAC  H + K+G+ VA+ LF     N G+++ +SN+Y A  RW D
Sbjct: 623 NMETNPDSAVWGALLSACCIHQEVKLGESVAKKLFFSNCSNGGFFVLMSNLYAASRRWND 682

Query: 776 AVEIGK 781
              I K
Sbjct: 683 VARIRK 688



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 257/560 (45%), Gaps = 28/560 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  ST+ L  YS + + +++  LF +   KDVV+WNA+I+              F
Sbjct: 93  GFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLF 152

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM          TL+ ++ +        QG+ +H L +KAG+  DS + N  V+MY KC
Sbjct: 153 VEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKC 212

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+  +  F  +     VSWNT++     N    + +L F++M      A++V++ S +
Sbjct: 213 ADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSIL 272

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+A  G       IH    K+G  ++  VSV  SL+  Y +CG IE AE  +     K+
Sbjct: 273 SANANTG------CIHCYATKIGLVEN--VSVVTSLVCSYVKCGYIELAELIYMSKLKKN 324

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+  AII  +A  G       L   +Q +  ++ D   +V +I        +  G + H
Sbjct: 325 LVALTAIISHYAEKGDMGSVVRLYSIVQHL-DMKLDAVAMVGIIQGFTYPDHIGIGLAFH 383

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           GY ++  L  D L+ N  +  YSK +++     LF  +     L SWNS+IS     G  
Sbjct: 384 GYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHK-KTLSSWNSVISSCAQAGRS 442

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            + + L SQ + S       TL ++L +C    +L FG+ +HC+ L+           AL
Sbjct: 443 IDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTAL 502

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY+ CG +  A ++ + +      S WN +I      G    A+  +  M  ++   P
Sbjct: 503 VDMYVKCGRMDFAENVFKSMKEPCLAS-WNSLISGYGLFGFHNHALLCYTEM-MEKGIKP 560

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
           + +T   +++AC +  L  EG+    + +K   G+    Q+  +++ M GR    + A  
Sbjct: 561 NKITFSGILAACTHGGLVEEGRKYFKI-MKKKFGIVPESQHCASMVGMLGRAGLFEEAIV 619

Query: 528 VFESC-YNCNLCTWNCMISA 546
             ++   N +   W  ++SA
Sbjct: 620 FIQNMETNPDSAVWGALLSA 639


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 189/619 (30%), Positives = 328/619 (52%), Gaps = 41/619 (6%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +H+  +K+G     +V     L  +Y++   +  A + F    CK V  WNA++  + L 
Sbjct: 23  LHSQCLKVGLAHDSFV--VTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLE 80

Query: 256 GKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           GK+ E   L H+M      E  PD  TV   +  C+    L  G+ +HG+  ++ +  D+
Sbjct: 81  GKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDM 140

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + ++L++ YSK   ++ A  +F    P  D+V W S+I+G             F  M+ 
Sbjct: 141 FVGSALIELYSKCGQMNDAVKVFTEY-PKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199

Query: 362 LCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L  Q S    TL++   +C        G+S+H +  + GF       N+++++Y   G +
Sbjct: 200 L-EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +A +L + + +  D   W+ ++     NG    A+  F  M  ++    + VT+++ + 
Sbjct: 259 RSAANLFREMPYK-DIISWSSMVACYADNGAETNALNLFNEMIDKR-IELNRVTVISALR 316

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +     EGK +H LA+     LD  V  AL+ MY +C   K+A  +F      ++ +
Sbjct: 317 ACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVS 376

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  + S +++     ++L +F ++      P+ I++V IL+A ++LG+++    +H  V 
Sbjct: 377 WAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVS 436

Query: 597 HLGFQENSFISSALLDMYSNCKS--NA-------------AWSSMISAYGYHGKGWEAIE 641
             GF  N FI ++L+++Y+ C S  NA              WSS+I+AYG+HG+G EA++
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALK 496

Query: 642 LFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           LF++M N S ++P   + +S+LSACSH+GL++EG++ ++ M+ EY + P TEH+  +VD+
Sbjct: 497 LFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDL 556

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR G+L +A + I  +P+Q  P VWGA+L AC  H + K+G+  A  LF L+P + GYY
Sbjct: 557 LGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYY 616

Query: 761 ISLSNMYVALGRWKDAVEI 779
             LSN+Y     W DA ++
Sbjct: 617 TLLSNIYCVDKNWHDAAKL 635



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 269/571 (47%), Gaps = 39/571 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K G+  DS +      +YA+   L  +   F    C     WN ++        
Sbjct: 23  LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 155 PEKCLLYFREMGWSG---EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             + L  F +M       E+ DN ++S A+ + + L +L  GK+IH    K   ++  +V
Sbjct: 83  WVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFV 142

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
              ++LI +YS+CG +  A + F     +DVV W +II G+  NG  E A      M ++
Sbjct: 143 G--SALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVL 200

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V PD  T+V+  S CA       GRSVHG+  RR     L + NS+++ Y K+ S+  
Sbjct: 201 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRS 260

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A  LF  + P  D++SW+SM++             LF EM+    + +  T+++ L +C 
Sbjct: 261 AANLFREM-PYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 319

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  +LE GK IH   +  GF  +     ALM MY+ C     A  L  R+    D   W 
Sbjct: 320 SSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMP-KKDVVSWA 378

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++     + G   +++  F +M       PD++ LV +++A   L +  +   LH    K
Sbjct: 379 VLFSGYAEIGMAHKSLGVFCNML-SYGTRPDAIALVKILAASSELGIVQQALCLHAFVSK 437

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    +  +  +LI +Y +C  I +A+ VF+     ++ TW+ +I+A+  +     AL+L
Sbjct: 438 SGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKL 497

Query: 560 F----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           F     H + +PN+++ VSILSAC+  G++  G ++    FH+           +++ Y 
Sbjct: 498 FYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKM----FHV-----------MVNEYQ 542

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
              +   +  M+   G  G+  +A+++ +EM
Sbjct: 543 LMPNTEHYGIMVDLLGRMGELDKALDMINEM 573



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 279/589 (47%), Gaps = 30/589 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI- 69
           T L   Y+  +    +  LF ET  K V  WNA++ +       V  L  F +M  + I 
Sbjct: 40  TKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAIT 99

Query: 70  --RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
             R D+ T+ I + + + +  L+ G+++H    K  +  D  + +  + +Y+KCG +N +
Sbjct: 100 EERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDA 159

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASAC 186
              F+     D V W +I++G   N  PE  L +F  M    +   D V+L SA +A A 
Sbjct: 160 VKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQ 219

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L + + G+ +H    + G++    + + NS++++Y + G I +A   F  M  KD++SW+
Sbjct: 220 LSDFNLGRSVHGFVKRRGFDTK--LCLANSILNLYGKTGSIRSAANLFREMPYKDIISWS 277

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +++  +A NG    A +L +EM + + +E +  TV++ +  CA S  L EG+ +H  A+ 
Sbjct: 278 SMVACYADNGAETNALNLFNEM-IDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVN 336

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEML 360
                D+ +  +LMD Y K  S   A  LFN + P  D+VSW  + SG        K + 
Sbjct: 337 YGFELDITVSTALMDMYMKCFSPKNAIDLFNRM-PKKDVVSWAVLFSGYAEIGMAHKSLG 395

Query: 361 YLCSQFSFST------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             C+  S+ T      L+ IL + +    ++    +H +  K GF NN     +L+ +Y 
Sbjct: 396 VFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYA 455

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C  +  A  + + +    D   W+ +I A   +G  +EA+K F  M+   +  P+ VT 
Sbjct: 456 KCSSIDNANKVFKGM-RRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTF 514

Query: 475 VNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDI-KSASTVFESC 532
           V+++SAC +  L  EG K  H +  +  +  +T     ++ + GR  ++ K+   + E  
Sbjct: 515 VSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMP 574

Query: 533 YNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISIVSILS 577
                  W  ++ A    QN    E+ AL LF     +PN     ++LS
Sbjct: 575 MQAGPHVWGALLGACRIHQNIKIGELAALNLFL---LDPNHAGYYTLLS 620



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 2/297 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L  + S+L  Y       S+  LF E   KD+++W++M+    +N      L+ 
Sbjct: 236 RGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNL 295

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+++ I  +  T++  + A    + L++G+ +H L++  G   D ++    ++MY K
Sbjct: 296 FNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMK 355

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C    ++   F+ M   D VSW  + SG        K L  F  M   G + D ++L   
Sbjct: 356 CFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKI 415

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AAS+ LG +     +HA   K G++++ ++    SLI +Y++C  I+ A + F GM  K
Sbjct: 416 LAASSELGIVQQALCLHAFVSKSGFDNNEFIGA--SLIELYAKCSSIDNANKVFKGMRRK 473

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           DVV+W++II  +  +G+ EEA  L ++M     V+P+  T V+++S C+ + L+ EG
Sbjct: 474 DVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 201/674 (29%), Positives = 337/674 (50%), Gaps = 48/674 (7%)

Query: 141 SWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           S N  M   L  N   + L L+ +++ W G   +   ++ A+   AC G+   G  IHA 
Sbjct: 45  SLNRSMLTALRRNLSLEALDLFKKQLQW-GFVGNIDQVTVAIVLKACCGDSKLGCQIHAF 103

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            I  G+    +V+V NSL++MY + G  + A   F  +   D+VSWN ++ GF    + +
Sbjct: 104 AISSGF--ISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQ---RSD 158

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           +A +    M     V  D  T  T+++ C+D      G  +H   ++  L  ++ + N+L
Sbjct: 159 DALNFALRMNFT-GVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNAL 217

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCSQF 366
           +  YS+   L +A  +F+ +    DLVSWN+M+SG             +F EML    + 
Sbjct: 218 ITMYSRCCRLVEARRVFDEMRN-KDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKL 276

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              +    + +C   +  E G+ IH   +K+G+  +    N L+  Y  C D+  A  + 
Sbjct: 277 DHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVF 336

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           + I  + +   W  +I    ++     A   F  M ++    P+ VT V +I A     L
Sbjct: 337 ESII-DRNVVSWTTMISISEED-----ATSLFNEM-RRDGVYPNDVTFVGLIHAITMKNL 389

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             EG+ +HG+ +K+    +  V N+LITMY +   +  +  VFE      + +WN +IS 
Sbjct: 390 VEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISG 449

Query: 547 FSQNKAEVRALELFRH--LEFEPNEISIVSILS--ACTQLGVLRHGKQIHGHVFHLGFQE 602
           ++QN     AL+ F    +E  PNE +  S+LS  A  +   +RHG++ H H+  LG   
Sbjct: 450 YAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNT 509

Query: 603 NSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           N  +SSALLDMY+                 K+  AW+++ISA+  HG     + LF +M 
Sbjct: 510 NPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDME 569

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
             G++P   + +++++AC   G+VD G Q +N+M++++ + P  EH+  +VDMLGR+G+L
Sbjct: 570 REGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRL 629

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +EA EF+  +P      V  ++L AC  HG+  M K+VA+ L ++EP   G Y+ +SN+Y
Sbjct: 630 KEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLY 689

Query: 768 VALGRWKDAVEIGK 781
              G W+   +I K
Sbjct: 690 AEKGEWEKVAKIRK 703



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 270/540 (50%), Gaps = 31/540 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++H+    SL+  Y     F+ +L +F    N D+V+WN +++    +      L+F 
Sbjct: 108 GFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDD---ALNFA 164

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+ FD+ T   +++  +       G  +H   +K G+  +  + N  + MY++C
Sbjct: 165 LRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRC 224

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             L  +   F  M   D VSWN ++SG     N   + +L F EM   G + D+VS + A
Sbjct: 225 CRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGA 284

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A     E   G+ IH+L +K+GY+   +V V N LIS YS+C DIE A+  F  +  +
Sbjct: 285 ISACGHGKEFELGRQIHSLAVKIGYD--THVKVCNVLISTYSKCEDIEDAKLVFESIIDR 342

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW  +I     +   E+A  L +EM+    V P+  T V LI       L+ EG+ +
Sbjct: 343 NVVSWTTMI-----SISEEDATSLFNEMR-RDGVYPNDVTFVGLIHAITMKNLVEEGQMI 396

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HG  ++     +L + NSL+  Y+K  S+S +  +F  +    +++SWNS+IS     GL
Sbjct: 397 HGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELN-YREIISWNSLISGYAQNGL 455

Query: 356 FKEML--YLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           ++E L  +L +       +F+F ++L+ + S  +  S+  G+  H   LKLG + N I  
Sbjct: 456 WQEALQTFLSALMESRPNEFTFGSVLSSIASAEAI-SMRHGQRCHSHILKLGLNTNPIVS 514

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +AL+ MY   G +  +  +       ++ + W  +I A  ++G ++  +  FK M +++ 
Sbjct: 515 SALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARHGDYEAVMNLFKDM-EREG 572

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSA 525
             PDS+T + VI+ACG   +   G  L    +K  L+       ++++ M GR   +K A
Sbjct: 573 VKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEA 632



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 183/662 (27%), Positives = 316/662 (47%), Gaps = 56/662 (8%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
            +M+TA   N   +  L  F + ++ G     D  T+ I++ A    +  K G  +H  +
Sbjct: 48  RSMLTALRRN-LSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDS--KLGCQIHAFA 104

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           I +G I+  ++ N  +NMY K G  + +   F  ++  D VSWNT++SG       +  L
Sbjct: 105 ISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGF---QRSDDAL 161

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            +   M ++G   D V+ ++ +A  +      +G  +H+  +K G +   +V   N+LI+
Sbjct: 162 NFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVG--NALIT 219

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDI 278
           MYS+C  +  A R F  M  KD+VSWNA++ G+A  G    EA  +  EM L   ++ D 
Sbjct: 220 MYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEM-LKEGMKLDH 278

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLF 336
            +    IS C        GR +H  A++  +GYD  + + N L+  YSK   +  A+L+F
Sbjct: 279 VSFTGAISACGHGKEFELGRQIHSLAVK--IGYDTHVKVCNVLISTYSKCEDIEDAKLVF 336

Query: 337 NAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
            +I   N +VSW +MIS        LF EM       +  T + ++ +      +E G+ 
Sbjct: 337 ESIIDRN-VVSWTTMISISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQM 395

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           IH   +K  F +     N+L+ MY     +  +  + + +++    S WN +I    QNG
Sbjct: 396 IHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIIS-WNSLISGYAQNG 454

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL--AFEGKSLHGLALKSLMGLDTR 507
            +QEA++TF S   +  + P+  T  +V+S+  + E      G+  H   LK  +GL+T 
Sbjct: 455 LWQEALQTFLSALME--SRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK--LGLNTN 510

Query: 508 --VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
             V +AL+ MY +   I  +  VF      N   W  +ISA +++      + LF+ +E 
Sbjct: 511 PIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMER 570

Query: 566 E---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA 622
           E   P+ I+ +++++AC + G++  G Q+           NS +   L++      S   
Sbjct: 571 EGVKPDSITFLAVITACGRKGMVDTGYQLF----------NSMVKDHLIE-----PSPEH 615

Query: 623 WSSMISAYGYHGKGWEAIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +SSM+   G  G+  EA E   ++   +G+    S + SLL AC   G VD   +  +++
Sbjct: 616 YSSMVDMLGRAGRLKEAEEFVGQIPGGAGL----SVLQSLLGACRIHGNVDMAKRVADDL 671

Query: 682 LE 683
           +E
Sbjct: 672 IE 673



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 233/484 (48%), Gaps = 24/484 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGIR 70
           +L+T YS       +  +F E  NKD+V+WNAM++    E    +  +  F EM++EG++
Sbjct: 216 ALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMK 275

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  +    +SA       + GR +H L++K G      +CNV ++ Y+KC D+  ++  
Sbjct: 276 LDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLV 335

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSW T++S        E     F EM   G   ++V+    + A      +
Sbjct: 336 FESIIDRNVVSWTTMISIS-----EEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLV 390

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G++IH + +K  +     ++V+NSLI+MY++   +  + + F  +  ++++SWN++I 
Sbjct: 391 EEGQMIHGVCVKTSFLSE--LNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 448

Query: 251 GFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           G+A NG ++EA    L  +   R  E    +V++ I+  A+++ +R G+  H + ++  L
Sbjct: 449 GYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIA-SAEAISMRHGQRCHSHILKLGL 507

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             + ++ ++L+D Y+K  S+ ++  +F+   P+ + V+W ++IS             LFK
Sbjct: 508 NTNPIVSSALLDMYAKRGSICESLGVFSE-TPLKNEVAWTAIISAHARHGDYEAVMNLFK 566

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINC 416
           +M     +    T LA++ +C     ++ G  +    +K      +    ++++ M    
Sbjct: 567 DMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRA 626

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A   + +I   +  S    ++ AC  +G+   A +    + + +     S  L++
Sbjct: 627 GRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMS 686

Query: 477 VISA 480
            + A
Sbjct: 687 NLYA 690



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 170/346 (49%), Gaps = 22/346 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  H+     L++ YS     E +  +F    +++VV+W  MI+   E+         F
Sbjct: 308 GYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLF 362

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  +G+  +  T + ++ A+T  N +++G+++H + +K   +++ ++ N  + MYAK 
Sbjct: 363 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 422

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE--MGWSGEQADNVSLSS 179
             ++ S   F  ++  + +SWN+++SG   N   ++ L  F    M     +    S+ S
Sbjct: 423 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLS 482

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A++  +  + +G+  H+  +KLG   +P VS  ++L+ MY++ G I  +   F     
Sbjct: 483 SIASAEAIS-MRHGQRCHSHILKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPL 539

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+ V+W AII   A +G +E   +L  +M+    V+PD  T + +I+ C      R+G  
Sbjct: 540 KNEVAWTAIISAHARHGDYEAVMNLFKDME-REGVKPDSITFLAVITACG-----RKGMV 593

Query: 300 VHGYAIRRLLGYDLLM------MNSLMDFYSKSNSLSKAELLFNAI 339
             GY +   +  D L+       +S++D   ++  L +AE     I
Sbjct: 594 DTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI 639


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 217/807 (26%), Positives = 375/807 (46%), Gaps = 69/807 (8%)

Query: 10   STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE-----NRCVVMGLHFFGEM 64
            + +L+T YS      S+  +F ++ ++D+VTWN+++ A  +        V+ G   FG +
Sbjct: 649  TNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLL 708

Query: 65   VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             E G      TL  ++        ++    VH  ++K G   D  +    VN+Y K G +
Sbjct: 709  REFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLV 768

Query: 125  NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
              +   F  M   D V WN ++   + N++ ++ L +F     SG   D  +L   +   
Sbjct: 769  GQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIG-- 826

Query: 185  ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                ++S  +  HA  +K                           A + F      ++ +
Sbjct: 827  GVNSDVSNNRKRHAEQVK-------------------------AYAMKMFPFDQGSNIFA 861

Query: 245  WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            WN  +  F   G+   A D    + L  ++  D  T+V ++S    +  L  G  +H   
Sbjct: 862  WNKKLTEFLHAGQIVAAIDCFKTL-LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALV 920

Query: 305  IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---EMLY 361
            I+      + + NSLM+ YSK+  +  AE  F   +P  DL+SWN+MIS   +   EM  
Sbjct: 921  IKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF-INSPELDLISWNTMISSYAQNNLEMEA 979

Query: 362  LCS------------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            +C+            QF+ +++L    + +  E    G  +H + +K G  N++    AL
Sbjct: 980  ICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTAL 1039

Query: 410  MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            + +Y   G +  A  LL    ++ D + WN ++    ++   ++A++ F S+  +     
Sbjct: 1040 IDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIMFGYIKSNKSRKALEHF-SLMHEMGIPI 1097

Query: 470  DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
            D +TL   I A G L    +GK +   A+K     D  V + ++ MY +C D+ +A  +F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 530  ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                  +   W  MIS + +N  E  AL ++  +     +P+E +  +++ A + L  L 
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 587  HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------WSSMISAYG 631
             GKQIH +V  L +  + F+ ++L+DMY  C S                  W++M+    
Sbjct: 1218 QGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLA 1277

Query: 632  YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             HG   EA+ LF  M ++GI+P K + I +LSACSHSGL  E  +Y++ M + Y + PE 
Sbjct: 1278 QHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEI 1337

Query: 692  EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
            EH+ C+VD LGR+G++QEA   I ++P +    ++ A+L AC   GD +  K+VA+ L  
Sbjct: 1338 EHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLA 1397

Query: 752  LEPENVGYYISLSNMYVALGRWKDAVE 778
            L+P +   Y+ LSN+Y A  +W D  +
Sbjct: 1398 LDPSDSSAYVLLSNIYAASRQWDDVTD 1424



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 179/692 (25%), Positives = 310/692 (44%), Gaps = 75/692 (10%)

Query: 86   MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
            M  LK G+  H   + +G + D  L N  + MY+KCG L S+   F      D V+WN+I
Sbjct: 624  MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683

Query: 146  MSG------CLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            ++         + N  E   L+   RE G+S      ++L+  +      G +   + +H
Sbjct: 684  LAAYAQFADSSYENVLEGFRLFGLLREFGFS---ITRLTLAPLLKLCLLSGFVQVSETVH 740

Query: 198  ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               +K+G+E   +VS   +L+++Y + G +  A   F  M  +D V WN ++  +  N  
Sbjct: 741  GYAVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 258  FEEA---FDLLHEMQLMRSVEPDIAT---VVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             +EA   F   H         PD +    V+  ++    +   R    V  YA++     
Sbjct: 799  QDEALRFFSAFHRSGFF----PDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMK----- 849

Query: 312  DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--FKEMLYLCSQFSFS 369
                   +  F   SN       +F     + + +    +++ +  FK +L         
Sbjct: 850  -------MFPFDQGSN-------IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 370  TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
            TL+ IL +    + L+ G+ IH   +K  F+      N+LM+MY   G + AA       
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN- 954

Query: 430  SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC--GNLELA 487
            S   D   WN +I +  QN    EAI TF+ +  +    PD  TL +V+ AC  G+    
Sbjct: 955  SPELDLISWNTMISSYAQNNLEMEAICTFRDLL-RDGLKPDQFTLASVLRACSTGDEGEY 1013

Query: 488  FE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
            F  G  +H  A+K  +  D+ V  ALI +Y +   +  A  +    Y+ +L +WN ++  
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFG 1073

Query: 547  FSQNKAEVRALE---LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            + ++    +ALE   L   +    +EI++ + + A   L  L+ GKQI  +   LGF  +
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133

Query: 604  SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             ++SS +LDMY  C                   AW++MIS Y  +G    A+ ++H M  
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193

Query: 649  SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHV--CIVDMLGRSG 705
            SG++P + +  +L+ A S    +++G Q + N+++ +Y +    +H V   +VDM  + G
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSL----DHFVGTSLVDMYCKCG 1249

Query: 706  KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
             +Q+AY   + + ++ K   W AML   + HG
Sbjct: 1250 SVQDAYRVFRKMDVR-KVVFWNAMLLGLAQHG 1280



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 182/356 (51%), Gaps = 7/356 (1%)

Query: 3    FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            F   +P S SL+  YS      ++   F  +   D+++WN MI++  +N   +  +  F 
Sbjct: 925  FAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFR 984

Query: 63   EMVEEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +++ +G++ D  TL  ++ A +   +      G  VH  +IK G+I DS +    +++Y+
Sbjct: 985  DLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYS 1044

Query: 120  KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            K G ++ +E    G +  D  SWN IM G + +N   K L +F  M   G   D ++L++
Sbjct: 1045 KGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLAT 1104

Query: 180  AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A+ AS CL  L  GK I A  IKLG+ +  +VS  + ++ MY +CGD+  A   F  ++ 
Sbjct: 1105 AIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS--SGVLDMYIKCGDMPNALELFGEISR 1162

Query: 240  KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
             D V+W  +I G+  NG  + A  + H M++   V+PD  T  TLI   +    L +G+ 
Sbjct: 1163 PDEVAWTTMISGYIENGDEDHALSVYHLMRV-SGVQPDEYTFATLIKASSCLTALEQGKQ 1221

Query: 300  VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            +H   ++     D  +  SL+D Y K  S+  A  +F  +  +  +V WN+M+ GL
Sbjct: 1222 IHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM-DVRKVVFWNAMLLGL 1276



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 110/262 (41%), Gaps = 4/262 (1%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   L  S+ +L  Y       ++L LF E    D V W  MI+  +EN      L  +
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY 1188

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
              M   G++ D  T   ++ A + +  L+QG+ +H   +K     D  +    V+MY KC
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G +  +   F  M     V WN ++ G   + + ++ L  FR M  +G Q D V+    +
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 182  AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            +A +  G  S   K   A+    G   +P +   + L+    + G I+ AE     M  K
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGI--TPEIEHYSCLVDALGRAGRIQEAENVIASMPFK 1366

Query: 241  DVVS-WNAIIDGFALNGKFEEA 261
               S + A++      G  E A
Sbjct: 1367 ASASMYRALLGACRTKGDAETA 1388



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A  +L+L   GK  H   + S    D  + N LITMY +C  + SA  VF+   + +L T
Sbjct: 623 AMADLKL---GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 540 WNCMISAFSQ-------NKAE-VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
           WN +++A++Q       N  E  R   L R   F    +++  +L  C   G ++  + +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCK-----------------SNAAWSSMISAYGYHG 634
           HG+   +GF+ + F+S AL+++Y  CK                     W+ M+ AY  + 
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIY--CKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797

Query: 635 KGWEAIELFHEMCNSGIRPTKSSV 658
              EA+  F     SG  P  S++
Sbjct: 798 FQDEALRFFSAFHRSGFFPDFSNL 821


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 232/814 (28%), Positives = 388/814 (47%), Gaps = 86/814 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+  Y+      ++  +F      D + W++MI       C    L  F
Sbjct: 198 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 257

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G   D  TL+ I+S L                                   A  
Sbjct: 258 SRMDKMGSAPDQVTLVTIISTL-----------------------------------ASS 282

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +      M    TV+WN ++SG   +      L  +++M   G      + +S +
Sbjct: 283 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 342

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
           +A+A +     G+ +HA  +  G + +  V V +SLI++Y++CG    A+  F  ++C K
Sbjct: 343 SAAANMKAFVEGQQMHAAAVMHGLDAN--VFVGSSLINLYAKCGCPSDAKNVF-DLSCEK 399

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++V WNA++ GF  N   EEA  +   M +  +++ D  T V+++  C        G+ V
Sbjct: 400 NIVMWNAMLTGFVQNELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQV 458

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---FK 357
           H   I+  +   L + N+ +D YSK  ++  A+ LF+ I P  D +SWN++  GL    +
Sbjct: 459 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI-PYKDSISWNALTVGLAQNLE 517

Query: 358 EMLYLC------------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTI 404
           E   +C               SFST +    +C++  + E GK IHC  +K G  SN+ +
Sbjct: 518 EEEAVCMLKRMRLHGITPDDVSFSTAIN---ACSNIRATETGKQIHCLAIKYGICSNHAV 574

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G ++L+ +Y   GD+ ++  +  ++  +S     N +I    QN +  EAI+ F+ + + 
Sbjct: 575 G-SSLIDLYSKHGDVESSRKIFAQVDASSIVPI-NALIAGFVQNNNEDEAIQLFQQVLKD 632

Query: 465 QNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDI 522
               P SVT  +++S C G+L  A  GK +H   LKS ++  DT +  +L  +Y + + +
Sbjct: 633 -GLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 690

Query: 523 KSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           + A+ +  E   + NL  W  +IS ++QN     +L  F   RH     +E +  S+L A
Sbjct: 691 EDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKA 750

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAA 622
           C+ +     GK+IHG +   GF      +SAL+DMYS C                +    
Sbjct: 751 CSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMP 810

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMI  +  +G   EA+ LF +M    I+P + + + +L AC+HSGL+ EG  ++ +M 
Sbjct: 811 WNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMR 870

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           + Y + P  +H+ C +D+LGR G LQEA E I  LP +P   VW   L+AC  H D + G
Sbjct: 871 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERG 930

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           K  A  L +LEP+    Y+ LS+++ A G W +A
Sbjct: 931 KIAARKLVELEPQYSSTYVLLSSLHAATGNWAEA 964



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 178/706 (25%), Positives = 323/706 (45%), Gaps = 82/706 (11%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGDLNS 126
           G R D   L +++SA +++  L  GR VHC  +K+G  + S  C    V+MYAKCGD+ +
Sbjct: 163 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPN 221

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F G+ C DT+ W+++++ C H     ++ L  F  M   G   D V+L        
Sbjct: 222 ARRVFDGIACPDTICWSSMIA-CYHRVGCYQEALALFSRMDKMGSAPDQVTLV------- 273

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
                                         ++IS  +  G ++ A      M     V+W
Sbjct: 274 ------------------------------TIISTLASSGRLDHATALLKKMPTPSTVAW 303

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           NA+I G A +G     F++L   + MRS  + P  +T  +++S  A+     EG+ +H  
Sbjct: 304 NAVISGHAQSGL---EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAA 360

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+   L  ++ + +SL++ Y+K    S A+ +F+ ++   ++V WN+M++G         
Sbjct: 361 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEE 419

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F+ M+    Q    T ++IL +C    S   GK +HC  +K     +    NA + 
Sbjct: 420 AIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLD 479

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G +  A +L   I +  D+  WN + V   QN   +EA+   K M +    +PD 
Sbjct: 480 MYSKYGAIGDAKALFSLIPYK-DSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDD 537

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           V+    I+AC N+     GK +H LA+K  +  +  V ++LI +Y +  D++S+  +F  
Sbjct: 538 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 597

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               ++   N +I+ F QN  E  A++LF+ +     +P+ ++  SILS C+       G
Sbjct: 598 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 657

Query: 589 KQIHGHVFHLG-FQENSFISSALLDMY----------------SNCKSNAAWSSMISAYG 631
           KQ+H +    G   +++ +  +L  +Y                 + K+   W+++IS Y 
Sbjct: 658 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 717

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G G  ++  F  M +  +R  +++  S+L ACS      +G + +  + +      ET
Sbjct: 718 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYET 777

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                ++DM  + G +  ++E  K L  +     W +M+   + +G
Sbjct: 778 ATSA-LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 822



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/667 (24%), Positives = 307/667 (46%), Gaps = 54/667 (8%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS--SECTFSGMHCADTVSWNTIMSGCL 150
           R +H   ++ G      L +  V +Y K G +    S   ++G   +   S  +++S   
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAAS--SLLSCHA 143

Query: 151 HNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
            +  P   L  FR +   +G + D   L+  ++A + +G L+YG+ +H   +K G+  S 
Sbjct: 144 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 203

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +     +L+ MY++CGD+  A R F G+ C D + W+++I  +   G ++EA  L   M 
Sbjct: 204 FCEA--ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 261

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA-IRRLLGYDLLMMNSLMDFYSKSNS 328
            M S  PD  T+VT+IS  A S     GR  H  A ++++     +  N+++  +++S  
Sbjct: 262 KMGSA-PDQVTLVTIISTLASS-----GRLDHATALLKKMPTPSTVAWNAVISGHAQSG- 314

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
                L FN +    D+ SW     GL+          + ST  ++L +  + ++   G+
Sbjct: 315 -----LEFNVLGLYKDMRSW-----GLWP---------TRSTFASMLSAAANMKAFVEGQ 355

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H   +  G   N    ++L+++Y  CG    A ++   +S   +   WN ++    QN
Sbjct: 356 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQN 414

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
              +EAI+ F+ M  +     D  T V+++ AC  L   + GK +H + +K+ M +   V
Sbjct: 415 ELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 473

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-- 566
            NA + MY +   I  A  +F      +  +WN +    +QN  E  A+ + + +     
Sbjct: 474 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 533

Query: 567 -PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------- 615
            P+++S  + ++AC+ +     GKQIH      G   N  + S+L+D+YS          
Sbjct: 534 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 593

Query: 616 -----NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                +  S    +++I+ +  +    EAI+LF ++   G++P+  +  S+LS CS S  
Sbjct: 594 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 653

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
              G Q +   L+   +  +T   V +  +  +S  L++A + +  +P       W A++
Sbjct: 654 SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 713

Query: 731 SACSHHG 737
           S  + +G
Sbjct: 714 SGYAQNG 720


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 231/814 (28%), Positives = 387/814 (47%), Gaps = 86/814 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+  Y+      ++  +F      D + W++MI       C    L  F
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G   D  TL+ I+S L                                   A  
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTL-----------------------------------ASS 272

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +      M    TV+WN ++SG   +      L  +++M   G      + +S +
Sbjct: 273 GRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASML 332

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
           +A+A +     G+ +HA  +  G + + +V   +SLI++Y++CG    A+  F  ++C K
Sbjct: 333 SAAANMKAFVEGQQMHAAAVMHGLDANVFVG--SSLINLYAKCGCPSDAKNVF-DLSCEK 389

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++V WNA++ GF  N   EEA  +   M +  +++ D  T V+++  C        G+ V
Sbjct: 390 NIVMWNAMLTGFVQNELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---FK 357
           H   I+  +   L + N+ +D YSK  ++  A+ LF+ I P  D +SWN++  GL    +
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI-PYKDSISWNALTVGLAQNLE 507

Query: 358 EMLYLC------------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTI 404
           E   +C               SFST +    +C++  + E GK IHC  +K G  SN+ +
Sbjct: 508 EEEAVCMLKRMRLHGITPDDVSFSTAIN---ACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G ++L+ +Y   GD+ ++  +  ++  +S     N +I    QN +  EAI+ F+ + + 
Sbjct: 565 G-SSLIDLYSKHGDVESSRKIFAQVDASSIVPI-NALIAGFVQNNNEDEAIQLFQQVLKD 622

Query: 465 QNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDI 522
               P SVT  +++S C G+L  A  GK +H   LKS ++  DT +  +L  +Y + + +
Sbjct: 623 -GLKPSSVTFSSILSGCSGSLNSAI-GKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKML 680

Query: 523 KSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           + A+ +  E   + NL  W  +IS ++QN     +L  F   RH     +E +  S+L A
Sbjct: 681 EDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKA 740

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAA 622
           C+ +     GK+IHG +   GF      +SAL+DMYS C                +    
Sbjct: 741 CSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMP 800

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMI  +  +G   EA+ LF +M    I+P + + + +L AC+HSGL+ EG  ++  M 
Sbjct: 801 WNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMR 860

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           + Y + P  +H+ C +D+LGR G LQEA E I  LP +P   VW   L+AC  H D + G
Sbjct: 861 KVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERG 920

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           K  A  L +LEP+    Y+ LS+++ A G W +A
Sbjct: 921 KIAARKLVELEPQYSSTYVLLSSLHAATGNWAEA 954



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 178/706 (25%), Positives = 323/706 (45%), Gaps = 82/706 (11%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAKCGDLNS 126
           G R D   L +++SA +++  L  GR VHC  +K+G  + S  C    V+MYAKCGD+ +
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPN 211

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +   F G+ C DT+ W+++++ C H     ++ L  F  M   G   D V+L        
Sbjct: 212 ARRVFDGIACPDTICWSSMIA-CYHRVGCYQEALALFSRMDKMGSAPDQVTLV------- 263

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
                                         ++IS  +  G ++ A      M     V+W
Sbjct: 264 ------------------------------TIISTLASSGRLDHATALLKKMPTPSTVAW 293

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           NA+I G A +G     F++L   + MRS  + P  +T  +++S  A+     EG+ +H  
Sbjct: 294 NAVISGHAQSGL---EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAA 350

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+   L  ++ + +SL++ Y+K    S A+ +F+ ++   ++V WN+M++G         
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQNELPEE 409

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F+ M+    Q    T ++IL +C    S   GK +HC  +K     +    NA + 
Sbjct: 410 AIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLD 469

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G +  A +L   I +  D+  WN + V   QN   +EA+   K M +    +PD 
Sbjct: 470 MYSKYGAIGDAKALFSLIPYK-DSISWNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDD 527

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           V+    I+AC N+     GK +H LA+K  +  +  V ++LI +Y +  D++S+  +F  
Sbjct: 528 VSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQ 587

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               ++   N +I+ F QN  E  A++LF+ +     +P+ ++  SILS C+       G
Sbjct: 588 VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIG 647

Query: 589 KQIHGHVFHLG-FQENSFISSALLDMY----------------SNCKSNAAWSSMISAYG 631
           KQ+H +    G   +++ +  +L  +Y                 + K+   W+++IS Y 
Sbjct: 648 KQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYA 707

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G G  ++  F  M +  +R  +++  S+L ACS      +G + +  + +      ET
Sbjct: 708 QNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYET 767

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
                ++DM  + G +  ++E  K L  +     W +M+   + +G
Sbjct: 768 ATSA-LIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 812



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 163/667 (24%), Positives = 307/667 (46%), Gaps = 54/667 (8%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS--SECTFSGMHCADTVSWNTIMSGCL 150
           R +H   ++ G      L +  V +Y K G +    S   ++G   +   S  +++S   
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAAS--SLLSCHA 133

Query: 151 HNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
            +  P   L  FR +   +G + D   L+  ++A + +G L+YG+ +H   +K G+  S 
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +     +L+ MY++CGD+  A R F G+ C D + W+++I  +   G ++EA  L   M 
Sbjct: 194 FCEA--ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMD 251

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA-IRRLLGYDLLMMNSLMDFYSKSNS 328
            M S  PD  T+VT+IS  A S     GR  H  A ++++     +  N+++  +++S  
Sbjct: 252 KMGSA-PDQVTLVTIISTLASS-----GRLDHATALLKKMPTPSTVAWNAVISGHAQSG- 304

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
                L FN +    D+ SW     GL+          + ST  ++L +  + ++   G+
Sbjct: 305 -----LEFNVLGLYKDMRSW-----GLWP---------TRSTFASMLSAAANMKAFVEGQ 345

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H   +  G   N    ++L+++Y  CG    A ++   +S   +   WN ++    QN
Sbjct: 346 QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFD-LSCEKNIVMWNAMLTGFVQN 404

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
              +EAI+ F+ M  +     D  T V+++ AC  L   + GK +H + +K+ M +   V
Sbjct: 405 ELPEEAIRMFQYM-MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-- 566
            NA + MY +   I  A  +F      +  +WN +    +QN  E  A+ + + +     
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 567 -PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------- 615
            P+++S  + ++AC+ +     GKQIH      G   N  + S+L+D+YS          
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 616 -----NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                +  S    +++I+ +  +    EAI+LF ++   G++P+  +  S+LS CS S  
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
              G Q +   L+   +  +T   V +  +  +S  L++A + +  +P       W A++
Sbjct: 644 SAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAII 703

Query: 731 SACSHHG 737
           S  + +G
Sbjct: 704 SGYAQNG 710


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 231/751 (30%), Positives = 362/751 (48%), Gaps = 51/751 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           F   +LL   SALT    L  G+ +H   +  G   D  +    VNMY KCG L+ +   
Sbjct: 61  FTFPSLLKACSALTN---LSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117

Query: 131 F-------SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           F       SG+   D   WN+++ G       ++ +  FR M   G + D  SLS  V+ 
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177

Query: 184 SACLGELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
               G      GK IH   ++   +   ++    +LI MY + G    A R F  +  K 
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT--ALIDMYFKFGLSIDAWRVFVEIEDKS 235

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV WN +I GF  +G  E + DL + +    SV+    +    +  C+ S     GR +
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDL-YMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
           H   ++  L  D  +  SL+  YSK   + +AE +F+ +     L  WN+M++  + E  
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD-KRLEIWNAMVAA-YAEND 352

Query: 361 YLCSQ---FSFSTLLAILP---------SCNSPESL-EFGKSIHCWQLKLGFSNNTIGVN 407
           Y  S    F F    ++LP         SC S   L  +GKS+H    K    + +   +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ +Y  CG    A+ + + +    D   W  +I    +NG F+EA+K F  M    ++
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471

Query: 468 -SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PDS  + +V +AC  LE    G  +HG  +K+ + L+  V ++LI +Y +C   + A 
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
            VF S    N+  WN MIS +S+N     +++LF  +  +   P+ +SI S+L A +   
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L  GK +HG+   LG   ++ + +AL+DMY  C               KS   W+ MI 
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            YG HG    A+ LF EM  +G  P   + +SL+SAC+HSG V+EG   +  M ++Y + 
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  EH+  +VD+LGR+G L+EAY FIK +PI+    +W  +LSA   H + ++G   AE 
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           L ++EPE    Y+ L N+Y+  G   +A ++
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKL 802



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 194/697 (27%), Positives = 326/697 (46%), Gaps = 88/697 (12%)

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           Y +   LY +  G S       +  S + A + L  LSYGK IH   + LG+   P+++ 
Sbjct: 40  YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT 99

Query: 214 TNSLISMYSQCGDIEAAERAF--W-----GMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
             SL++MY +CG ++ A + F  W     G++ +DV  WN++IDG+    +F+E      
Sbjct: 100 --SLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157

Query: 267 EMQLMRSVEPDIATVVTLIS-LCADSLLLR-EGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            M L+  V PD  ++  ++S +C +    R EG+ +HG+ +R  L  D  +  +L+D Y 
Sbjct: 158 RM-LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYF 216

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLCSQFSFSTLLAI--- 374
           K      A  +F  I   +++V WN MI G            LY+ ++ +   L++    
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276

Query: 375 --LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
             L +C+  E+  FG+ IHC  +K+G  N+     +L+ MY  CG +  A ++   +  +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV-D 335

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
                WN ++ A  +N +   A+  F  M +Q++  PDS TL NVIS C  L L   GKS
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H    K  +   + +++AL+T+Y +C     A  VF+S    ++  W  +IS   +N  
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454

Query: 553 EVRALELFRHLE-----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
              AL++F  ++      +P+   + S+ +AC  L  LR G Q+HG +   G   N F+ 
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           S+L+D+YS C               ++  AW+SMIS Y  +     +I+LF+ M + GI 
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG------- 705
           P   S+ S+L A S +  + +G   +   L    +  +T     ++DM  + G       
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAEN 633

Query: 706 ---KLQEAYEFIKNLPI------------------------QPKPGVWGAMLSACSHHGD 738
              K+Q       NL I                         P    + +++SAC+H G 
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693

Query: 739 TKMGKQVAELL---FKLEPENVGYYISLSNMYVALGR 772
            + GK + E +   + +EP N+ +Y   +NM   LGR
Sbjct: 694 VEEGKNIFEFMKQDYGIEP-NMEHY---ANMVDLLGR 726



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 196/745 (26%), Positives = 337/745 (45%), Gaps = 56/745 (7%)

Query: 10  STSLLTAYSNVSYFESSLALF-------YETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +TSL+  Y    + + ++ +F            +DV  WN+MI    + R    G+  F 
Sbjct: 98  ATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLK--QGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            M+  G+R D+ +L I+VS + +    +  +G+ +H   ++  +  DS L    ++MY K
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217

Query: 121 CG-DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            G  +++          ++ V WN ++ G   +   E  L  +     +  +  + S + 
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+ A +      +G+ IH   +K+G  + PY  V  SL+SMYS+CG +  AE  F  +  
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPY--VCTSLLSMYSKCGMVGEAETVFSCVVD 335

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K +  WNA++  +A N     A DL   M+  +SV PD  T+  +IS C+   L   G+S
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYGKS 394

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           VH    +R +     + ++L+  YSK      A L+F ++    D+V+W S+ISGL    
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE-KDMVAWGSLISGLCKNG 453

Query: 356 -FKEMLYLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            FKE L +                 + ++  +C   E+L FG  +H   +K G   N   
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            ++L+ +Y  CG    A  +   +S   +   WN +I   ++N   + +I  F  M   Q
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLML-SQ 571

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PDSV++ +V+ A  +     +GKSLHG  L+  +  DT ++NALI MY +C   K A
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQL 582
             +F+   + +L TWN MI  +  +   + AL LF  ++     P++++ +S++SAC   
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G +  GK I        F +  +     ++ Y+N         M+   G  G   EA   
Sbjct: 692 GFVEEGKNI------FEFMKQDYGIEPNMEHYAN---------MVDLLGRAGLLEEAYSF 736

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
              M    I    S  + LLSA      V+ G+     +L     R  T  +V ++++  
Sbjct: 737 IKAM---PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGST--YVQLINLYM 791

Query: 703 RSGKLQEAYEFI---KNLPIQPKPG 724
            +G   EA + +   K   +  +PG
Sbjct: 792 EAGLKNEAAKLLGLMKEKGLHKQPG 816



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 175/631 (27%), Positives = 310/631 (49%), Gaps = 39/631 (6%)

Query: 2   GFLAH--LPTSTSLLTAYSNVSYFESSLAL-----FYETCNK-DVVTWNAMITACVENRC 53
           GF+    L T + L TA  ++ YF+  L++     F E  +K +VV WN MI     +  
Sbjct: 194 GFMLRNSLDTDSFLKTALIDM-YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252

Query: 54  VVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
               L  +       ++  ST+    + A +Q      GR +HC  +K G+  D  +C  
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTS 312

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            ++MY+KCG +  +E  FS +       WN +++    N+Y    L  F  M       D
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + +LS+ ++  + LG  +YGK +HA   K   + +   ++ ++L+++YS+CG    A   
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS--TIESALLTLYSKCGCDPDAYLV 430

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ-LMRSVEPDIATVVTLISLCADSL 292
           F  M  KD+V+W ++I G   NGKF+EA  +  +M+    S++PD   + ++ + CA   
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            LR G  VHG  I+  L  ++ + +SL+D YSK      A  +F +++  N +V+WNSMI
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN-MVAWNSMI 549

Query: 353 S------------GLFKEMLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKL 397
           S             LF  ML   SQ  F    ++ ++L + +S  SL  GKS+H + L+L
Sbjct: 550 SCYSRNNLPELSIDLFNLML---SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G  ++T   NAL+ MY+ CG    A ++ +++ H S  + WN++I     +G    A+  
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLMIYGYGSHGDCITALSL 665

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITM 515
           F  M ++   SPD VT +++ISAC +     EGK++    +K   G++  +++   ++ +
Sbjct: 666 FDEM-KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF-MKQDYGIEPNMEHYANMVDL 723

Query: 516 YGRCRDIKSASTVFESC-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISI- 572
            GR   ++ A +  ++     +   W C++SA  + +  E+  L   + L  EP   S  
Sbjct: 724 LGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTY 783

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           V +++   + G+     ++ G +   G  + 
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 217/482 (45%), Gaps = 45/482 (9%)

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           S N+ I      G++ +A  L  +          + T  +L+  C+    L  G+++HG 
Sbjct: 26  SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA------PMNDLVSWNSMISGLFK 357
            +     YD  +  SL++ Y K   L  A  +F+  +         D+  WNSMI G FK
Sbjct: 86  VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145

Query: 358 ------------EMLYLCSQ---FSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSN 401
                        ML    +   FS S +++++  C       E GK IH + L+     
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM--CKEGNFRREEGKQIHGFMLRNSLDT 203

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           ++    AL+ MY   G  + A+ +   I   S+   WN++IV    +G  + ++  +  +
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-L 262

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +  +    S +    + AC   E +  G+ +H   +K  +  D  V  +L++MY +C  
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           +  A TVF    +  L  WN M++A+++N     AL+LF   R     P+  ++ +++S 
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C+ LG+  +GK +H  +F    Q  S I SALL +YS C               K   AW
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442

Query: 624 SSMISAYGYHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            S+IS    +GK  EA+++F +M   +  ++P    + S+ +AC+    +  GLQ + +M
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502

Query: 682 LE 683
           ++
Sbjct: 503 IK 504


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 185/576 (32%), Positives = 314/576 (54%), Gaps = 38/576 (6%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLR 295
           M  +DVVSWN+++  F +NG F +A   L  + +MRS  P ++A++V+++  C      +
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRAL--VSMMRSGFPLNVASLVSVVPACGTEQEEK 58

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--- 352
            G S+H  A++  L   + + N+L+D Y K   +  +  +F+ +   N+ VSWNS I   
Sbjct: 59  FGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNE-VSWNSAIGCF 117

Query: 353 --SGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
             +G + ++L +  + S         TL ++LP+     S + G+ +H + +K     + 
Sbjct: 118 LNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDI 177

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              N+L+ MY   G L  A ++ +++  + +   WN +I    QNG   EA +    M Q
Sbjct: 178 FVANSLVDMYAKFGSLEKASTIFEQMK-DRNVVSWNAMIANLVQNGAETEAFRLVTDM-Q 235

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +    P+S+TLVNV+ AC  +     GK +H  +++  +  D  + NALI MY +C  + 
Sbjct: 236 KSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLS 295

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACT 580
            A  +FE     ++ ++N +I  +SQ+     +L LF+ +     + + +S +  LSACT
Sbjct: 296 LARNIFERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACT 354

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            L V +HGK+IH  +       + F+S++LLD+Y+                 K  A+W++
Sbjct: 355 NLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNT 414

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI  YG HG+   A ELF  M   G+     S I++L+ACSH GLVD+G +Y++ M+ + 
Sbjct: 415 MILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ- 473

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
           ++ P+  H+ C+VD+LGR+G+L +  E I+++P      VWGA+L AC  HG+ ++ +  
Sbjct: 474 NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWA 533

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AE LF+L+PE+ GYY  + NMY   GRW +A +I K
Sbjct: 534 AEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRK 569



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 253/525 (48%), Gaps = 22/525 (4%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +DVV+WN++++A + N            M+  G   +  +L+ +V A       K G  +
Sbjct: 4   RDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSI 63

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L++K G+    +L N  V+MY K GD+ +S   F GM   + VSWN+ +   L+  + 
Sbjct: 64  HALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFY 123

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
              L  FR+M        +++LSS + A   LG    G+ +H   IK   +   +V+  N
Sbjct: 124 GDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA--N 181

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+ MY++ G +E A   F  M  ++VVSWNA+I     NG   EAF L+ +MQ  +S E
Sbjct: 182 SLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQ--KSGE 239

Query: 276 -PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+  T+V ++  CA    L+ G+ +H ++IRR L +DL + N+L+D YSK   LS A  
Sbjct: 240 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 299

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F       D VS+N++I G            LFK+M  +   +   + +  L +C +  
Sbjct: 300 IFE--RSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLS 357

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
             + GK IHC  ++   S +    N+L+ +Y   G LV A  +  +I+   D + WN +I
Sbjct: 358 VFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT-KKDVASWNTMI 416

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
           +    +G    A + F+ M +      D V+ + V++AC +  L  +GK      +   +
Sbjct: 417 LGYGMHGQIDIAFELFELM-KGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNI 475

Query: 503 GLDTRVQNALITMYGRCRDI-KSASTVFESCYNCNLCTWNCMISA 546
                    ++ + GR   + K A  + +  +  N   W  ++ A
Sbjct: 476 EPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGA 520



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 214/457 (46%), Gaps = 17/457 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  Y      E+S+ +F     ++ V+WN+ I   +        L  F +M E  +
Sbjct: 79  ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNV 138

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
              S TL  ++ AL ++     GR VH  SIK  M  D  + N  V+MYAK G L  +  
Sbjct: 139 MPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAST 198

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + VSWN +++  + N    +      +M  SGE  ++++L + + A A +  
Sbjct: 199 IFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMAS 258

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK IHA  I+ G     ++S  N+LI MYS+CG +  A R  +  + KD VS+N +I
Sbjct: 259 LKMGKQIHAWSIRRGLMFDLFIS--NALIDMYSKCGQLSLA-RNIFERSEKDDVSYNTLI 315

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G++ +    E+  L  +M+ +  ++ D  + +  +S C +  + + G+ +H   +RRLL
Sbjct: 316 LGYSQSPWCFESLLLFKQMRSV-GIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLL 374

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
                + NSL+D Y+K   L  A  +FN I    D+ SWN+MI G            LF+
Sbjct: 375 SGHPFLSNSLLDLYTKGGMLVTASKIFNKITK-KDVASWNTMILGYGMHGQIDIAFELFE 433

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M      +   + +A+L +C+    ++ GK      +        +    ++ +    G
Sbjct: 434 LMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAG 493

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            L     +++ +   +++  W  ++ AC  +G+ + A
Sbjct: 494 QLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELA 530


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 196/669 (29%), Positives = 339/669 (50%), Gaps = 41/669 (6%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           S+N I++         + L  +  M  +   +D  +  S + A + L   S G  +H   
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +  G     Y++  +SLI+ Y++ G  + A + F  M  ++VV W +II  ++  G+  E
Sbjct: 96  LVSGLSLDAYIA--SSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L  EM+  + ++P   + VT++SL      L   + +HG AI      D+ + NS++
Sbjct: 154 AFSLFDEMR-RQGIQP---SSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSML 209

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS-------------QFS 367
             Y K  ++  +  LF+ +    DLVSWNS++S  + ++ Y+C              +  
Sbjct: 210 SMYGKCRNIEYSRKLFDYM-DQRDLVSWNSLVSA-YAQIGYICEVLLLLKTMRIQGFEPD 267

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T  ++L    S   L+ G+ +H   L+  F  +     +L+ MY+  G++  AF + +
Sbjct: 268 PQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFE 327

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           R S + D   W  +I    QNG   +A+  F+ M +    S  + T+ +VI+AC  L   
Sbjct: 328 R-SLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKS-STATMASVITACAQLGSY 385

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G S+HG   +  + +D   QN+L+TM+ +C  +  +S VF+     NL +WN MI+ +
Sbjct: 386 NLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGY 445

Query: 548 SQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +QN    +AL LF  +  +   P+ I+IVS+L  C   G L  GK IH  V   G +   
Sbjct: 446 AQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCI 505

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + ++L+DMY  C                   +WS++I  YGYHGKG  A+  + +   S
Sbjct: 506 LVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLES 565

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G++P     +S+LS+CSH+GLV++GL  Y +M  ++ + P  EHH C+VD+L R+G+++E
Sbjct: 566 GMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEE 625

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           AY   K     P   V G +L AC  +G+ ++G  +A  +  L+P + G ++ L++ Y +
Sbjct: 626 AYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYAS 685

Query: 770 LGRWKDAVE 778
           + +W++  E
Sbjct: 686 INKWEEVGE 694



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 243/501 (48%), Gaps = 29/501 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ++SL+  Y+   + + +  +F     ++VV W ++I        V      F EM  +GI
Sbjct: 107 ASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGI 166

Query: 70  RFDSTTLLII---VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +  S T+L +   VS L  + CL      H  +I  G ++D +L N  ++MY KC ++  
Sbjct: 167 QPSSVTMLSLLFGVSELAHVQCL------HGSAILYGFMSDINLSNSMLSMYGKCRNIEY 220

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           S   F  M   D VSWN+++S      Y  + LL  + M   G + D  +  S ++ +A 
Sbjct: 221 SRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAAS 280

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            GEL  G+ +H   ++  ++   +V    SLI MY + G+I+ A R F     KDVV W 
Sbjct: 281 RGELKLGRCLHGQILRTCFDLDAHVET--SLIVMYLKGGNIDIAFRMFERSLDKDVVLWT 338

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G   NG  ++A  +  +M L   V+   AT+ ++I+ CA       G SVHGY  R
Sbjct: 339 AMISGLVQNGSADKALAVFRQM-LKFGVKSSTATMASVITACAQLGSYNLGTSVHGYMFR 397

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  D+   NSL+  ++K   L ++ ++F+ +   N LVSWN+MI+G            
Sbjct: 398 HELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRN-LVSWNAMITGYAQNGYVCKALF 456

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF EM          T++++L  C S   L  GK IH + ++ G     +   +L+ MY 
Sbjct: 457 LFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYC 516

Query: 415 NCGDL-VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            CGDL +A     Q  SH  D   W+ +IV    +G  + A++ F S   +    P+ V 
Sbjct: 517 KCGDLDIAQRCFNQMPSH--DLVSWSAIIVGYGYHGKGETALR-FYSKFLESGMKPNHVI 573

Query: 474 LVNVISACGNLELAFEGKSLH 494
            ++V+S+C +  L  +G +++
Sbjct: 574 FLSVLSSCSHNGLVEQGLNIY 594



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 222/462 (48%), Gaps = 17/462 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++ +  S S+L+ Y      E S  LF     +D+V+WN++++A  +   +   L   
Sbjct: 197 GFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLL 256

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G   D  T   ++S       LK GR +H   ++     D+ +    + MY K 
Sbjct: 257 KTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKG 316

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+++ +   F      D V W  ++SG + N   +K L  FR+M   G ++   +++S +
Sbjct: 317 GNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVI 376

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG  + G  +H  G    +E    ++  NSL++M+++CG ++ +   F  M  ++
Sbjct: 377 TACAQLGSYNLGTSVH--GYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRN 434

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA+I G+A NG   +A  L +EM+      PD  T+V+L+  CA +  L  G+ +H
Sbjct: 435 LVSWNAMITGYAQNGYVCKALFLFNEMRSDHQT-PDSITIVSLLQGCASTGQLHLGKWIH 493

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + IR  L   +L+  SL+D Y K   L  A+  FN + P +DLVSW+++I G       
Sbjct: 494 SFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQM-PSHDLVSWSAIIVGYGYHGKG 552

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNTIGVNA 408
                 + + L    + +    L++L SC+    +E G +I+       G + N      
Sbjct: 553 ETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHAC 612

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           ++ +    G +  A++L ++   +       I++ AC  NG+
Sbjct: 613 VVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGN 654



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           + T  SL+T ++   + + S  +F +   +++V+WNAMIT   +N  V   L  F EM  
Sbjct: 404 IATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRS 463

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM----IADSSLCNVFVNMYAKCG 122
           +    DS T++ ++        L  G+ +H   I+ G+    + D+SL    V+MY KCG
Sbjct: 464 DHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSL----VDMYCKCG 519

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           DL+ ++  F+ M   D VSW+ I+ G  ++   E  L ++ +   SG + ++V   S ++
Sbjct: 520 DLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLS 579

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           + +  G +  G  I+   +   +  +P +     ++ + S+ G +E A   +       V
Sbjct: 580 SCSHNGLVEQGLNIYE-SMTRDFGIAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPV 638

Query: 243 VS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +     I+D    NG  E    + +++ +++ ++
Sbjct: 639 LDVLGIILDACRANGNNELGDTIANDILMLKPMD 672


>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
 gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
          Length = 836

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 214/784 (27%), Positives = 373/784 (47%), Gaps = 43/784 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+L ++     L+  +      + S  +F     K+V +W+ MI A  +N         F
Sbjct: 53  GYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLF 112

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EGIR ++ T L ++ A +  N L  G+ VH     +    D SL    VNMYAKC
Sbjct: 113 ERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKC 172

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    ++  F  M   D V+WN +    +HN    K L   REM   G + +  + +S  
Sbjct: 173 GSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLL---REMDLQGVKPNATTYASIT 229

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             S+ L   +  + +    +  GY    +V V N+L+++Y++CGD+E A + F  +  KD
Sbjct: 230 RGSSTL---TGCRAMEQRLLASGY--MSHVPVQNALVNVYAKCGDLEGARKVFNRLERKD 284

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW+ +I  +  +G+  EA ++   M+   SVEP+  T V +I  C     +  G  VH
Sbjct: 285 VISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVH 344

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  +   L  D+ + ++L+  Y K  SL  A+  F+ +    D++ WN M+S     G  
Sbjct: 345 GRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEK-RDVLCWNFMLSAYSERGSP 403

Query: 357 KEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           ++++             T   +L +C++ E L  G+ +H   +  G   +     AL+ +
Sbjct: 404 QQVIEAYEAMDVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSL 463

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI C  L +A  + + +    D   WN ++V    +    EA++ +  M  +     ++V
Sbjct: 464 YIKCRSLKSACQVFEAMG-KKDVIPWNFMMVGYIDHDCDTEALRLYARM-HEAGVEANNV 521

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T  N + AC  ++    G  +  +        D     AL+ MY  C D+++A  VF S 
Sbjct: 522 TFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSR 581

Query: 533 Y--NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
                ++  W  MI++++Q      AL L++ +   E +PN ++  S+LSAC+ LG +  
Sbjct: 582 RGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILE 641

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGY 632
           G++IH  +     + +  + ++LL MY+ C S                 +W+ M++A+ +
Sbjct: 642 GRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAH 701

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG    A+EL  EM   G+ P   +  S+L ACSH G ++ G   + +M  +Y V P  +
Sbjct: 702 HGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKD 761

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H++C+VD+L R+G+L EA E I+ + ++ +   W  +L A   H +  MG + A+    +
Sbjct: 762 HYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHSNLAMGVEAAQC---V 818

Query: 753 EPEN 756
            PE+
Sbjct: 819 APED 822



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 168/656 (25%), Positives = 298/656 (45%), Gaps = 85/656 (12%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           GEL    V++A     GY D+ Y    N LI ++ + G+ + +   F GM  K+V SW+ 
Sbjct: 40  GELD---VLYARFTGTGYLDNVYFR--NWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSM 94

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +A NG   EAF L   M+    + P+  T + ++  C+    L  G+ VH Y    
Sbjct: 95  MIGAYAQNGHRNEAFLLFERME-SEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISAS 153

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------LFKE 358
              +D+ +  SL++ Y+K  S + A+ +F+++A   D+V+WN+M            L +E
Sbjct: 154 EFKWDISLQTSLVNMYAKCGSPADAKAVFDSMA-RKDIVTWNAMAGASVHNGQSHKLLRE 212

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGFSNNTIGVNALMH 411
           M           L  + P+  +  S+  G       +++    L  G+ ++    NAL++
Sbjct: 213 M----------DLQGVKPNATTYASITRGSSTLTGCRAMEQRLLASGYMSHVPVQNALVN 262

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  CGDL  A  +  R+    D   W+ +I A  Q+G   EAI+ ++ M  + +  P++
Sbjct: 263 VYAKCGDLEGARKVFNRLERK-DVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNA 321

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT V VI AC        G  +HG  +   +  D  V +AL+ MY +C  ++ A   F+ 
Sbjct: 322 VTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDR 381

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
               ++  WN M+SA+S+  +  + +E +  ++ EPN ++  ++L AC+ +  L  G+++
Sbjct: 382 VEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDVEPNAVTYTNVLIACSAMEDLAQGQKV 441

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKG 636
           H  +   G + +  + +ALL +Y  C+S  +               W+ M+  Y  H   
Sbjct: 442 HSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCD 501

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDV------ 687
            EA+ L+  M  +G+     +  + L ACS    ++ G +    +     E DV      
Sbjct: 502 TEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTAL 561

Query: 688 --------------------RPETEHHVCIVDML---GRSGKLQEAYEFIKNL---PIQP 721
                               R E    V    M+    ++G+ +EA    K +    I+P
Sbjct: 562 LNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKP 621

Query: 722 KPGVWGAMLSACSHHGDTKMGKQV-AELLFKLEPENVGYYISLSNMYVALGRWKDA 776
               + ++LSACS  G+   G+++ ++L  K E  +V    SL +MY   G  +DA
Sbjct: 622 NSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDA 677


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/602 (30%), Positives = 303/602 (50%), Gaps = 45/602 (7%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY+ C     A+ AF  +  +++ SW  ++  FA++G+ +E    L  M+    V PD  
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMR-QDGVRPDAV 59

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T +T +  C D   LR+G  +H   +   L  D  + N+L++ Y K  SLS A+ +F  +
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119

Query: 340 APMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
               +++SW+ M                F+ ML L  + + S ++ IL +C+SP  ++ G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACT 446
           + IH      GF +  +  NA+M MY  CG +  A  +   +     D   WNI++    
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
            N   ++AI+ ++ M  +    PD VT V+++SAC + E    G+ LH   +   +  + 
Sbjct: 240 HNDRGKDAIQLYQRMQLR----PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV 295

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH-LEF 565
            V NAL++MY +C     A  VF+     ++ +W  +ISA+ + +    A  LF+  LE 
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 566 E---------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           E         P+ ++ V+IL+AC  +  L  GK +       G   +  + +A++++Y  
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415

Query: 617 C----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
           C                     W++MI+ Y   G+  EA++LF  M   G+RP   S +S
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEY-DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +L ACSH+GL D+G  Y+ +M  EY +V    +H  C+ D+LGR G+L+EA EF++ LP+
Sbjct: 476 ILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPV 535

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P    W ++L+AC +H D K  K+VA  L +LEP     Y++LSN+Y  L +W    ++
Sbjct: 536 KPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKV 595

Query: 780 GK 781
            K
Sbjct: 596 RK 597



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/588 (25%), Positives = 272/588 (46%), Gaps = 42/588 (7%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYA C     ++  F  +   +  SW  +++    +   ++ L     M   G + D V+
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             +A+ +      L  G  IH + +    E  P VS  N+L++MY +CG +  A+R F  
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVS--NALLNMYKKCGSLSHAKRVFAK 118

Query: 237 M-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M   ++V+SW+ +    AL+G   EA      M L+  ++   + +VT++S C+   L++
Sbjct: 119 MERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL-GIKATKSAMVTILSACSSPALVQ 177

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISG 354
           +GR +H          +LL+ N++M  Y +  ++ +A  +F+A+   + D+VSWN M+S 
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 355 LF-----KEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                  K+ + L  +        T +++L +C+S E +  G+ +H   +      N I 
Sbjct: 238 YVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-- 463
            NAL+ MY  CG    A ++  ++   S  S W  +I A  +     EA   F+ M +  
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISAYVRRRLVAEACHLFQQMLELE 356

Query: 464 ----QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
                Q   PD++  V +++AC ++    +GK +   A    +  D  V  A++ +YG+C
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 520 RDIKSASTVFES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSI 575
            +I+ A  +F++ C   ++  WN MI+ ++Q      AL+LF  +E E   P+  S VSI
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
           L AC+  G+   GK              S+ +S   +  +  ++   +  +    G  G+
Sbjct: 477 LLACSHTGLEDQGK--------------SYFTSMTTEYRNVTRTIQHFGCVADLLGRGGR 522

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
             EA E   ++    ++P   +  SLL+AC +   +    +  N +L 
Sbjct: 523 LKEAEEFLEKL---PVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLR 567



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 270/595 (45%), Gaps = 63/595 (10%)

Query: 28  ALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMN 87
           A F     +++ +W  ++ A   +      L     M ++G+R D+ T +  + +     
Sbjct: 13  AAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPE 72

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM-HCADTVSWNTIM 146
            L+ G  +H + + + +  D  + N  +NMY KCG L+ ++  F+ M    + +SW +IM
Sbjct: 73  SLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISW-SIM 131

Query: 147 SG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +G   LH N  E  L +FR M   G +A   ++ + ++A +    +  G++IH+     G
Sbjct: 132 AGAHALHGNVWE-ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSG 190

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--TCKDVVSWNAIIDGFALNGKFEEAF 262
           +E    + V N++++MY +CG +E A + F  M    +DVVSWN ++  +  N + ++A 
Sbjct: 191 FESE--LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAI 248

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L   MQL     PD  T V+L+S C+ +  +  GR +H   +   L  ++++ N+L+  
Sbjct: 249 QLYQRMQL----RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSM 304

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL----CSQF 366
           Y+K  S ++A  +F+ +     ++SW ++IS             LF++ML L     SQ 
Sbjct: 305 YAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQR 363

Query: 367 SFSTLLA---ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                LA   IL +C    +LE GK +       G S++     A++++Y  CG++  A 
Sbjct: 364 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEAR 423

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +   +    D   WN +I    Q G   EA+K F  M + +   PDS + V+++ AC +
Sbjct: 424 RIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRM-EMEGVRPDSFSFVSILLACSH 482

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
             L  +GKS           + T  +N   T+                        + C+
Sbjct: 483 TGLEDQGKSY-------FTSMTTEYRNVTRTIQ----------------------HFGCV 513

Query: 544 ISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
                +      A E    L  +P+ ++  S+L+AC     L+  K++   +  L
Sbjct: 514 ADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 568



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 174/389 (44%), Gaps = 18/389 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF + L  + +++T Y      E +  +F   +   +DVV+WN M++  V N      + 
Sbjct: 190 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQ 249

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +  M    +R D  T + ++SA +    +  GRV+H   +   +  +  + N  V+MYA
Sbjct: 250 LYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 306

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-YPEKCLLYFR--EMGWSGE----QA 172
           KCG    +   F  M     +SW TI+S  +      E C L+ +  E+  +G     + 
Sbjct: 307 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 366

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D ++  + + A A +  L  GK++       G   S   +V  +++++Y +CG+IE A R
Sbjct: 367 DALAFVTILNACADVSALEQGKMVSEQAASCGL--SSDKAVGTAVVNLYGKCGEIEEARR 424

Query: 233 AFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            F  +  + DV  WNA+I  +A  G+  EA  L   M+ M  V PD  + V+++  C+ +
Sbjct: 425 IFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRME-MEGVRPDSFSFVSILLACSHT 483

Query: 292 LLLREGRSVHGYAIR--RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            L  +G+S         R +   +     + D   +   L +AE     +    D V+W 
Sbjct: 484 GLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWT 543

Query: 350 SMISGLFKEMLYLCSQFSFSTLLAILPSC 378
           S+++          ++   + LL + P C
Sbjct: 544 SLLAACRNHRDLKRAKEVANKLLRLEPRC 572


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 183/597 (30%), Positives = 297/597 (49%), Gaps = 33/597 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           NS +    + G +  A   F  MT +D +SW  +I G+       EA  L   M +    
Sbjct: 61  NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D   +   +  CA  + +  G  +HG++++  L + + + ++L+D Y K   + +   
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  +   N +VSW ++I+GL            F EM      +   T    L +     
Sbjct: 181 VFEKMMTRN-VVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSS 239

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK+IH   +K GF  ++  +N L  MY  CG       L +++    D   W  +I
Sbjct: 240 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM-RMPDVVSWTTLI 298

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q G  + A++ FK M ++   SP+  T   VIS+C NL  A  G+ +HG  L+  +
Sbjct: 299 STYVQMGEEEHAVEAFKRM-RKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGL 357

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
                V N++IT+Y +C  +KSAS VF      ++ +W+ +IS +SQ      A +    
Sbjct: 358 VNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSW 417

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           +  E   PNE ++ S+LS C  + +L  GKQ+H H+  +G    + + SA++ MYS C S
Sbjct: 418 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGS 477

Query: 620 NA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                            +W++MI+ Y  HG   EAI LF ++ + G++P     I +L+A
Sbjct: 478 VQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTA 537

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C+H+G+VD G  Y+  M   Y + P  EH+ C++D+L R+G+L EA   I+++P      
Sbjct: 538 CNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDV 597

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           VW  +L AC  HGD   G+  AE L +L+P + G +I+L+N+Y A GRWK+A  I K
Sbjct: 598 VWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRK 654



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 249/517 (48%), Gaps = 40/517 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  S++L+  Y  V   E    +F +   ++VV+W A+I   V     + GL +F
Sbjct: 154 GLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYF 213

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    + +DS T  I + A    + L  G+ +H  +IK G    S + N    MY KC
Sbjct: 214 SEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC 273

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  +     F  M   D VSW T++S  +     E  +  F+ M  S    +  + ++ +
Sbjct: 274 GKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVI 333

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           ++ A L    +G+ IH   ++LG  ++  +SV NS+I++YS+CG +++A   F G+T KD
Sbjct: 334 SSCANLAAAKWGEQIHGHVLRLGLVNA--LSVANSIITLYSKCGLLKSASLVFHGITRKD 391

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW+ II  ++  G  +EAFD L  M+     +P+   + +++S+C    LL +G+ VH
Sbjct: 392 IISWSTIISVYSQGGYAKEAFDYLSWMR-REGPKPNEFALSSVLSVCGSMALLEQGKQVH 450

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +   + ++ ++ ++++  YSK  S+ +A  +FN +  +ND++SW +MI+G       
Sbjct: 451 AHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGM-KINDIISWTAMINGYAEHGYS 509

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA- 408
                LF+++  +  +  +   + +L +CN           H   + LGF    +  N  
Sbjct: 510 QEAINLFEKISSVGLKPDYVMFIGVLTACN-----------HAGMVDLGFYYFMLMTNVY 558

Query: 409 -----------LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
                      L+ +    G L  A  +++ +  ++D   W+ ++ AC  +G       T
Sbjct: 559 RISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWT 618

Query: 458 FKSMTQ-QQNASPDSVTLVNVISACGNLELAFEGKSL 493
            + + Q   N++   +TL N+ +A G  + A   + L
Sbjct: 619 AEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKL 655



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 234/479 (48%), Gaps = 28/479 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIVSALTQMN 87
           +F +  ++D ++W  +I   V        L  F  M V  G + D   + + + A     
Sbjct: 79  MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGV 138

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            +  G ++H  S+K+G+I    + +  ++MY K G +      F  M   + VSW  I++
Sbjct: 139 NICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIA 198

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G +H  Y  + LLYF EM  S    D+ + + A+ ASA    L +GK IH   IK G+++
Sbjct: 199 GLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 258

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S +  V N+L +MY++CG  +   R F  M   DVVSW  +I  +   G+ E A +    
Sbjct: 259 SSF--VINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKR 316

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+    V P+  T   +IS CA+    + G  +HG+ +R  L   L + NS++  YSK  
Sbjct: 317 MR-KSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCG 375

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEML-YLC---------SQFSFSTLL 372
            L  A L+F+ I    D++SW+++IS     G  KE   YL          ++F+ S++L
Sbjct: 376 LLKSASLVFHGIT-RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 434

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++   C S   LE GK +H   L +G  +  +  +A++ MY  CG +  A  +   +  N
Sbjct: 435 SV---CGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN 491

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
            D   W  +I    ++G+ QEAI  F+ ++      PD V  + V++AC   G ++L F
Sbjct: 492 -DIISWTAMINGYAEHGYSQEAINLFEKIS-SVGLKPDYVMFIGVLTACNHAGMVDLGF 548


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 204/676 (30%), Positives = 338/676 (50%), Gaps = 46/676 (6%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           +  S+N ++   L  +   + L +F+     G   +    +  +A  AC G    G+ IH
Sbjct: 37  NAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFPKLGRQIH 96

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              I  G+    +++V+NSL++MY + G +E A   F  +   D+VSWN I+ GF    K
Sbjct: 97  GFVISSGF--VSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFE---K 151

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            E A      M L   V+ D  T  T +S C D      G  +H  A++     D+ + N
Sbjct: 152 SENALSFALRMNL-NGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGN 210

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCS 364
           +L+  YS+   L  A  +F+ + P  D VSW++MI+G             +F +M+    
Sbjct: 211 ALVTMYSRWEHLVDARKVFDEM-PSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGV 269

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +F    +   L  C    +LE GK IHC  +K G   +T   N L+  Y  C  +  A +
Sbjct: 270 KFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKA 329

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           + + I+ + +   W  +I    +      A+  F  M +     P+ VT + ++ A    
Sbjct: 330 VFELIN-DRNVISWTTMISLYEEG-----AVSLFNKM-RLDGVYPNDVTFIGLLHAITIR 382

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            +  +G  +HGL +K+    +  V N+LITMY +   ++ AS VF       + +WN +I
Sbjct: 383 NMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALI 442

Query: 545 SAFSQNKAEVRALELFRH--LEFEPNEISIVSILSACT--QLGVLRHGKQIHGHVFHLGF 600
           S ++QN     ALE F +  +E++PNE +  S+L+A +  +   L+HG++ H H+  +G 
Sbjct: 443 SGYAQNALCQEALEAFLYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGL 502

Query: 601 QENSFISSALLDMY---------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             +  IS ALLDMY               ++ +S  AW+++IS Y  HG     I+LF E
Sbjct: 503 NVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEE 562

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M    I+P     +S+L+ACS + +VD G Q++N M++++ + PE EH+ C+VDMLGR+G
Sbjct: 563 MEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAG 622

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           +L+EA E +  +P  P      ++L AC  HG+ +M +++A  L K EP   G Y+ +SN
Sbjct: 623 RLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSN 682

Query: 766 MYVALGRWKDAVEIGK 781
           +Y   G W+   ++ K
Sbjct: 683 LYAQKGDWEKVAKVRK 698



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 259/543 (47%), Gaps = 31/543 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++H+  S SL+  Y      E + ++F    + D+V+WN +++   ++      L F 
Sbjct: 103 GFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKSEN---ALSFA 159

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G++FDS T    +S          G  +H L++K G   D  + N  V MY++ 
Sbjct: 160 LRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRW 219

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             L  +   F  M   D VSW+ +++G     +   + +L F +M   G + DNV ++ A
Sbjct: 220 EHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVPITGA 279

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++       L  GK IH L +K G+E   + SV N LIS YS+C  IE A+  F  +  +
Sbjct: 280 LSVCGHERNLELGKQIHCLAVKTGHE--THTSVGNVLISTYSKCEIIEDAKAVFELINDR 337

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW  +I  +      E A  L ++M+L   V P+  T + L+       ++ +G  V
Sbjct: 338 NVISWTTMISLYE-----EGAVSLFNKMRL-DGVYPNDVTFIGLLHAITIRNMVEQGLMV 391

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG  I+     +L + NSL+  Y+K   +  A  +F  + P  +++SWN++ISG      
Sbjct: 392 HGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIEL-PYREIISWNALISGYAQNAL 450

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   L+  M Y  ++++F ++L  + S     SL+ G+  H   +K+G + + I  
Sbjct: 451 CQEALEAFLYAIMEYKPNEYTFGSVLNAI-SAGEDISLKHGQRCHSHLIKVGLNVDPIIS 509

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+ MY   G +  +  +    S  S  + W  +I    Q+G ++  IK F+ M +++ 
Sbjct: 510 GALLDMYAKRGSIQESQRVFNETSKQSQFA-WTALISGYAQHGDYESVIKLFEEM-EKER 567

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSA 525
             PD+V  ++V++AC    +   G+    + +K  ++  +    + ++ M GR   ++ A
Sbjct: 568 IKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEA 627

Query: 526 STV 528
             +
Sbjct: 628 EEI 630



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 172/716 (24%), Positives = 317/716 (44%), Gaps = 59/716 (8%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           F+    LF ++   +  ++N ++   +        L FF      G+  ++    ++++ 
Sbjct: 23  FQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLAL 82

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
                  K GR +H   I +G ++  ++ N  +NMY K G L  +   F  +H  D VSW
Sbjct: 83  KACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSW 142

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG--ELSYGKVIHALG 200
           NTI+SG       E  L +   M  +G + D+V+ ++A+  S CL   E  +G  +H L 
Sbjct: 143 NTILSGF---EKSENALSFALRMNLNGVKFDSVTYTTAL--SFCLDGEEFLFGWQLHTLA 197

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K G++   +V   N+L++MYS+   +  A + F  M  +D VSW+A+I G+A  G    
Sbjct: 198 LKCGFKGDVFVG--NALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGL 255

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
              L+    +   V+ D   +   +S+C     L  G+ +H  A++        + N L+
Sbjct: 256 QAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLI 315

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLA 373
             YSK   +  A+ +F  I   N ++SW +MIS        LF +M       +  T + 
Sbjct: 316 STYSKCEIIEDAKAVFELINDRN-VISWTTMISLYEEGAVSLFNKMRLDGVYPNDVTFIG 374

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH-- 431
           +L +      +E G  +H   +K  F +     N+L+ MY       A F  +Q  S   
Sbjct: 375 LLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMY-------AKFEFMQDASRVF 427

Query: 432 ----NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT---LVNVISACGNL 484
                 +   WN +I    QN   QEA++ F  +       P+  T   ++N ISA  ++
Sbjct: 428 IELPYREIISWNALISGYAQNALCQEALEAF--LYAIMEYKPNEYTFGSVLNAISAGEDI 485

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            L   G+  H   +K  + +D  +  AL+ MY +   I+ +  VF      +   W  +I
Sbjct: 486 SLK-HGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALI 544

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S ++Q+      ++LF  +E E   P+ +  +S+L+AC++  ++  G+Q           
Sbjct: 545 SGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFF--------- 595

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
            N  I   +++          +S M+   G  G+  EA E+   +      P  S++ SL
Sbjct: 596 -NMMIKDHMIE-----PEGEHYSCMVDMLGRAGRLEEAEEILARIPGG---PGVSALQSL 646

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           L AC   G V+   +  N+++++  +  E+  +V + ++  + G  ++  +  K +
Sbjct: 647 LGACRTHGNVEMAERIANDLMKKEPL--ESGPYVLMSNLYAQKGDWEKVAKVRKEM 700



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 241/504 (47%), Gaps = 33/504 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           GF   +    +L+T YS   +   +  +F E  ++D V+W+AMIT    E    +  +  
Sbjct: 201 GFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILV 260

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +MV EG++FD+  +   +S       L+ G+ +HCL++K G    +S+ NV ++ Y+K
Sbjct: 261 FVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSK 320

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +  ++  F  ++  + +SW T++S      Y E  +  F +M   G   ++V+    
Sbjct: 321 CEIIEDAKAVFELINDRNVISWTTMIS-----LYEEGAVSLFNKMRLDGVYPNDVTFIGL 375

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      +  G ++H L IK  +     ++V NSLI+MY++   ++ A R F  +  +
Sbjct: 376 LHAITIRNMVEQGLMVHGLCIKADFVSE--LTVGNSLITMYAKFEFMQDASRVFIELPYR 433

Query: 241 DVVSWNAIIDGFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +++SWNA+I G+A N   +EA +  L+ +   +  E    +V+  IS   D + L+ G+ 
Sbjct: 434 EIISWNALISGYAQNALCQEALEAFLYAIMEYKPNEYTFGSVLNAISAGED-ISLKHGQR 492

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
            H + I+  L  D ++  +L+D Y+K  S+ +++ +FN  +  +   +W ++ISG     
Sbjct: 493 CHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQF-AWTALISGYAQHG 551

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF+EM     +      L++L +C+    ++ G+      +K    ++ I   
Sbjct: 552 DYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIK----DHMIEPE 607

Query: 408 A-----LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                 ++ M    G L  A  +L RI      S    ++ AC  +G+ + A +    + 
Sbjct: 608 GEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLM 667

Query: 463 QQQN-ASPDSVTLVNVISACGNLE 485
           +++   S   V + N+ +  G+ E
Sbjct: 668 KKEPLESGPYVLMSNLYAQKGDWE 691


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 223/825 (27%), Positives = 376/825 (45%), Gaps = 78/825 (9%)

Query: 16  AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTT 75
           +Y  V  F        +  +     ++ +   C +   + +G      M+  G R   TT
Sbjct: 26  SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFR--PTT 83

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC------NVFVNMYAKCGDLNSSEC 129
            +        +NCL Q        + A M+ D          N  +N Y+K  D+  +  
Sbjct: 84  FV--------LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANS 135

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F+ M   D VSWN+++SG L N    K +  F +MG  G + D  + +  +   + L +
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            S G  IH + +++G +    V   ++L+ MY++      + R F G+  K+ VSW+AII
Sbjct: 196 TSLGMQIHGIVVRVGCDTD--VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV--TLISLCADSLLLREGRSVHGYAIRR 307
            G   N     A     EMQ    V   ++  +  +++  CA    LR G  +H +A++ 
Sbjct: 254 AGCVQNNLLSLALKFFKEMQ---KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D ++  + +D Y+K +++  A++LF+    +N   S+N+MI+G            L
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ-SYNAMITGYSQEEHGFKALLL 369

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  ++     F   +L  +  +C   + L  G  I+   +K   S +    NA + MY  
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           C  L  AF +   +    D   WN +I A  QNG   E +  F SM + +   PD  T  
Sbjct: 430 CQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFG 487

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV------- 528
           +++ AC    L + G  +H   +KS M  ++ V  +LI MY +C  I+ A  +       
Sbjct: 488 SILKACTGGSLGY-GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546

Query: 529 ---------FESCYNCNL----CTWNCMISAFSQNKAEVRALELF-RHLE--FEPNEISI 572
                     E  +N  L     +WN +IS +   +    A  LF R +E    P++ + 
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            ++L  C  L     GKQIH  V     Q + +I S L+DMYS C               
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 666

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           +    W++MI  Y +HGKG EAI+LF  M    I+P   + IS+L AC+H GL+D+GL+Y
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS-HH 736
           +  M  +Y + P+  H+  +VD+LG+SGK++ A E I+ +P +    +W  +L  C+ H 
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 786

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            + ++ ++    L +L+P++   Y  LSN+Y   G W+   ++ +
Sbjct: 787 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRR 831



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 178/674 (26%), Positives = 301/674 (44%), Gaps = 67/674 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           ++  YS  +    + + F     +DVV+WN+M++  ++N   +  +  F +M  EGI FD
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T  II+   + +     G  +H + ++ G   D    +  ++MYAK      S   F 
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS-----ACL 187
           G+   ++VSW+ I++GC+ NN     L +F+EM     Q  N  +S ++ AS     A L
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-----QKVNAGVSQSIYASVLRSCAAL 294

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            EL  G  +HA  +K  +     V      + MY++C +++ A+  F      +  S+NA
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTAT--LDMYAKCDNMQDAQILFDNSENLNRQSYNA 352

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +I G++      +A  L H  +LM S +  D  ++  +   CA    L EG  ++G AI+
Sbjct: 353 MITGYSQEEHGFKALLLFH--RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  D+ + N+ +D Y K  +L++A  +F+ +    D VSWN++I+             
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLF 469

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF  ML    +    T  +IL +C    SL +G  IH   +K G ++N+    +L+ MY 
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528

Query: 415 NCGDLVAAFSLLQRISHNSDTS-------------------CWNIVIVACTQNGHFQEAI 455
            CG +  A  +  R    ++ S                    WN +I         ++A 
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F  M  +   +PD  T   V+  C NL  A  GK +H   +K  +  D  + + L+ M
Sbjct: 589 MLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C D+  +  +FE     +  TWN MI  ++ +     A++LF  +  E   PN ++ 
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           +SIL AC  +G++  G +      +    +  +     L  YSN         M+   G 
Sbjct: 708 ISILRACAHMGLIDKGLE------YFYMMKRDYGLDPQLPHYSN---------MVDILGK 752

Query: 633 HGKGWEAIELFHEM 646
            GK   A+EL  EM
Sbjct: 753 SGKVKRALELIREM 766



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 272/606 (44%), Gaps = 73/606 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +++LL  Y+    F  SL +F     K+ V+W+A+I  CV+N  + + L FF EM +  
Sbjct: 217 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                +    ++ +   ++ L+ G  +H  ++K+   AD  +    ++MYAKC ++  ++
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      +  S+N +++G     +  K LL F  +  SG   D +SLS    A A + 
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            LS G  I+ L IK     S  V V N+ I MY +C  +  A R F  M  +D VSWNAI
Sbjct: 397 GLSEGLQIYGLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     NGK  E   L   M L   +EPD  T  +++  C     L  G  +H   ++  
Sbjct: 455 IAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSG 512

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLF-------NAIAPMNDL------------VSWN 349
           +  +  +  SL+D YSK   + +AE +        N    M +L            VSWN
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572

Query: 350 SMISG------------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           S+ISG            LF  M+ +     +F+++T   +L +C +  S   GK IH   
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT---VLDTCANLASAGLGKQIHAQV 629

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K    ++    + L+ MY  CGDL  +  + ++ S   D   WN +I     +G  +EA
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I+ F+ M   +N  P+ VT ++++ AC ++ L  +G     + +K   GLD ++ +    
Sbjct: 689 IQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYFYM-MKRDYGLDPQLPH---- 742

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                                    ++ M+    ++    RALEL R + FE +++   +
Sbjct: 743 -------------------------YSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777

Query: 575 ILSACT 580
           +L  CT
Sbjct: 778 LLGVCT 783


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 181/571 (31%), Positives = 305/571 (53%), Gaps = 36/571 (6%)

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D    N +I GFA  G  E A      M L     PD  T   ++  CA    L EGR+ 
Sbjct: 71  DAFLHNVVIRGFADAGLPEAALAAYRAM-LAAGARPDRFTFPVVVKCCARLGALEEGRAA 129

Query: 301 HGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           H  AIR  L+G ++   NSL+ FY+K   ++ AE +F+ + P+ D+V+WNSM+ G     
Sbjct: 130 HSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGM-PVRDIVTWNSMVDGYVSNG 188

Query: 356 --------FKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   F+EM   L  Q     ++A L +C    +L  G+ +H + ++ G   +    
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            +L+ MY  CG + +A  +   +   +  + WN +I     NG  +EA   F  M + + 
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVT-WNCMIGGYALNGCPEEAFDCFVQM-KAEG 306

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
              + VT +N+++AC   E +  G+S+HG   +S       ++ AL+ MY +   +KS+ 
Sbjct: 307 HQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSE 366

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG 583
           T+F    N  L +WN MI+A+   +    A+ LF  L      P+  ++ +++ A   LG
Sbjct: 367 TIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLG 426

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
           +LR  +Q+H ++  L + EN+ +++A++ MY+ C               K   +W+++I 
Sbjct: 427 LLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIM 486

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y  HG+G  A+E+F EM ++G++P +S+ +S+L+ACS SG+ DEG   +N M  +Y + 
Sbjct: 487 GYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGII 546

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P+ EH+ C+ D+LGR+G L+E  +FI+++PI P   +WG++L+A  +  D  + +  AE 
Sbjct: 547 PQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAER 606

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +F+LE +N G Y+ LS+MY   GRW+D   I
Sbjct: 607 IFELEHDNTGCYVILSSMYADAGRWEDVQRI 637



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/590 (28%), Positives = 286/590 (48%), Gaps = 29/590 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P+  SL+ +++       +LA    +   D    N +I    +       L  +  M+  
Sbjct: 44  PSLKSLVLSHAAAGRMHDALAAVRSS--PDAFLHNVVIRGFADAGLPEAALAAYRAMLAA 101

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNS 126
           G R D  T  ++V    ++  L++GR  H  +I+ G++       N  +  YAK G +  
Sbjct: 102 GARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVAD 161

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASA 185
           +E  F GM   D V+WN+++ G + N      L  FREM    + Q D V + +A+AA  
Sbjct: 162 AERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACC 221

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L  G+ +HA  I+ G E    V V  SL+ MY +CG I +AE  F  M  + VV+W
Sbjct: 222 LDSALMQGREVHAYVIRHGLEQD--VKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTW 279

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I G+ALNG  EEAFD   +M+     + ++ T + L++ CA +     GRSVHGY  
Sbjct: 280 NCMIGGYALNGCPEEAFDCFVQMK-AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVT 338

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKEM----- 359
           R      +++  +L++ YSK   +  +E +F  +     LVSWN+MI+  ++KEM     
Sbjct: 339 RSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTN-KTLVSWNNMIAAYMYKEMYNEAI 397

Query: 360 ---LYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
              L L +Q     + T+ A++P+      L   + +H + ++L +  NT+  NA+MHMY
Sbjct: 398 TLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMY 457

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CGD+V++  +  +++   D   WN +I+    +G  + A++ F  M +     P+  T
Sbjct: 458 ARCGDVVSSRKIFDKMA-GKDVISWNTIIMGYAIHGQGKIALEMFSEM-KSNGLQPNEST 515

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            V+V++AC    +A EG     L ++   G+  ++++   +  + GR  D++      ES
Sbjct: 516 FVSVLTACSVSGMADEGWIQFNL-MQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIES 574

Query: 532 C-YNCNLCTWNCMISAFSQNKAEVRALELF--RHLEFEPNEISIVSILSA 578
                    W  +++A S+N+ ++   E    R  E E +      ILS+
Sbjct: 575 IPITPTFRIWGSLLTA-SRNRNDIDIAEYAAERIFELEHDNTGCYVILSS 623



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 232/467 (49%), Gaps = 21/467 (4%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D    N ++ G      PE  L  +R M  +G + D  +    V   A LG L  G+  H
Sbjct: 71  DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAH 130

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           +  I+LG   S  V   NSL++ Y++ G +  AER F GM  +D+V+WN+++DG+  NG 
Sbjct: 131 SAAIRLGLVGSE-VYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGL 189

Query: 258 FEEAFDLLHEMQLMRSVEPD-IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
              A D   EM     V+ D +  +  L + C DS L+ +GR VH Y IR  L  D+ + 
Sbjct: 190 GALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALM-QGREVHAYVIRHGLEQDVKVG 248

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS 364
            SL+D Y K  +++ AE +F A  P   +V+WN MI G             F +M     
Sbjct: 249 TSLLDMYCKCGAIASAEGMF-ATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGH 307

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           Q    T + +L +C   ES  +G+S+H +  +  F  + +   AL+ MY   G + ++ +
Sbjct: 308 QVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSET 367

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +  ++++ +  S WN +I A      + EAI  F  +  Q    PD  T+  V+ A   L
Sbjct: 368 IFGQMTNKTLVS-WNNMIAAYMYKEMYNEAITLFLELLNQP-LYPDYFTMSAVVPAFVLL 425

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            L  + + +H   ++   G +T V NA++ MY RC D+ S+  +F+     ++ +WN +I
Sbjct: 426 GLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTII 485

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
             ++ +     ALE+F  ++    +PNE + VS+L+AC+  G+   G
Sbjct: 486 MGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG 532



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   TSLL  Y       S+  +F    ++ VVTWN MI     N C       F
Sbjct: 240 GLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCF 299

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG + +  T + +++A  Q      GR VH    ++  +    L    + MY+K 
Sbjct: 300 VQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKV 359

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + SSE  F  M     VSWN +++  ++     + +  F E+       D  ++S+ V
Sbjct: 360 GKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVV 419

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG L   + +H+  ++L Y ++    VTN+++ MY++CGD+ ++ + F  M  KD
Sbjct: 420 PAFVLLGLLRQCRQMHSYIVRLDYGENTL--VTNAVMHMYARCGDVVSSRKIFDKMAGKD 477

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN II G+A++G+ + A ++  EM+    ++P+ +T V++++ C+ S +  EG
Sbjct: 478 VISWNTIIMGYAIHGQGKIALEMFSEMK-SNGLQPNESTFVSVLTACSVSGMADEG 532



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 1/226 (0%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FL H+   T+LL  YS V   +SS  +F +  NK +V+WN MI A +        +  F 
Sbjct: 342 FLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFL 401

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           E++ + +  D  T+  +V A   +  L+Q R +H   ++     ++ + N  ++MYA+CG
Sbjct: 402 ELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCG 461

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           D+ SS   F  M   D +SWNTI+ G   +   +  L  F EM  +G Q +  +  S + 
Sbjct: 462 DVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLT 521

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           A +  G    G +   L ++  Y   P +     +  +  + GD+ 
Sbjct: 522 ACSVSGMADEGWIQFNL-MQRDYGIIPQIEHYGCMTDLLGRAGDLR 566


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 201/679 (29%), Positives = 347/679 (51%), Gaps = 49/679 (7%)

Query: 136 CADTVSW---NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           C  TV +   + I+S C  N + E    +      S     +V+ +  + A + L  L +
Sbjct: 57  CPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEH 116

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH   +   Y+  P + + N ++SMY +CG ++ A   F  M  K+VVSW ++I G+
Sbjct: 117 GRKIHRHMLTCNYQ--PDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGY 174

Query: 253 ALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  G+ + A  L   +Q++RS   PD  T  +++  C+     +  R +H + ++   G 
Sbjct: 175 SRYGEEDNAITLY--VQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGA 232

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           DL+  N+L+  Y+K + ++ A  +F+ I  + DL+SW SMI+G             F+EM
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRII-IKDLISWGSMIAGFSQLGYELEALCHFREM 291

Query: 360 L----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           L    Y  ++F F +  +   +C+     + G+ IH   +K G  ++     +L  MY  
Sbjct: 292 LSQSVYQPNEFVFGSAFS---ACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAK 348

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L +A ++   I    D   WN +I       + +E+  +F S  +     P+ VT++
Sbjct: 349 CGFLESARTVFYHIE-KPDLVAWNAIIAGFASVSNAKES-SSFFSQMRHTGLVPNDVTVL 406

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN- 534
           +++ AC    +   G  +H   +K    LD  V N+L++MY +C ++  A  VFE   N 
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466

Query: 535 CNLCTWNCMISA-FSQNKAE--VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
            ++ +WN +++A   QN+A   +R  +L      +P+ +++ ++L +  Q+     G QI
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKG 636
           H  +   G   +  +S+AL++MY+ C S                 +WSS+I  Y   G G
Sbjct: 527 HCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCG 586

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            EA ELF  M   G++P + + + +L+ACSH G+V+EGL+ Y  M E+Y + P  EH  C
Sbjct: 587 KEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSC 646

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+L R+G L  A +FIK +P  P   VW  +L+AC  HG+ ++GK+ AE + K++P N
Sbjct: 647 MVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSN 706

Query: 757 VGYYISLSNMYVALGRWKD 775
               + L N++ + G WKD
Sbjct: 707 SAAVVMLCNIHASSGHWKD 725



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 263/535 (49%), Gaps = 19/535 (3%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           S T   +++A + +  L+ GR +H   +      D  L N  ++MY KCG L  +   F 
Sbjct: 98  SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW +++SG       +  +  + +M  SG   D+ +  S V + + L +   
Sbjct: 158 SMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKL 217

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            + +HA  +K   E    +   N+LISMY++   +  A   F  +  KD++SW ++I GF
Sbjct: 218 ARQLHAHVLK--SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           +  G   EA     EM      +P+     +  S C+  L    GR +HG  I+  LG D
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L    SL D Y+K   L  A  +F  I    DLV+WN++I+G             F +M 
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEK-PDLVAWNAIIAGFASVSNAKESSSFFSQMR 394

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           +     +  T+L++L +C+ P  L  G  +H + +K+GF+ +    N+L+ MY  C +L 
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + + I + +D   WN ++ AC Q     E ++  K M   +   PD VTL NV+ +
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR-IKPDHVTLTNVLVS 513

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
            G +     G  +H   +KS + LD  V NALI MY +C  ++ A  +F+S  N ++ +W
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
           + +I  ++Q      A ELFR +     +PNEI+ V IL+AC+ +G++  G +++
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 163/600 (27%), Positives = 279/600 (46%), Gaps = 50/600 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L+ Y      + +  +F     K+VV+W +MI+           +  + +M+  G   D
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   IV + + ++  K  R +H   +K+   AD    N  ++MY K   +  +   FS
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELS 191
            +   D +SW ++++G     Y  + L +FREM   S  Q +     SA +A + L E  
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH L IK G     +     SL  MY++CG +E+A   F+ +   D+V+WNAII G
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGC--SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA     +E+     +M+    + P+  TV++L+  C++ ++L  G  VH Y ++     
Sbjct: 377 FASVSNAKESSSFFSQMR-HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
           D+ + NSL+  YSK ++L+ A  +F  I    D+VSWN++++   +     E+L L ++ 
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL-TKL 494

Query: 367 SFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
            F+        TL  +L S     S E G  IHC+ +K G + +    NAL++MY  CG 
Sbjct: 495 MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGS 554

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +   I  N D   W+ +IV   Q G  +EA + F++M +     P+ +T V ++
Sbjct: 555 LECARKMFDSIG-NPDIISWSSLIVGYAQAGCGKEAFELFRTM-RGLGVKPNEITFVGIL 612

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC ++ +  E     GL L   M  D R+                 S   E C      
Sbjct: 613 TACSHIGMVEE-----GLKLYRTMQEDYRI-----------------SPTKEHC------ 644

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
             +CM+   ++      A +  + + F P+ +   ++L+AC   G L  GK+   +V  +
Sbjct: 645 --SCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKI 702



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 182/360 (50%), Gaps = 15/360 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL   Y+   + ES+  +FY     D+V WNA+I              FF
Sbjct: 331 GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFF 390

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  +  T+L ++ A ++   L  G  VH   +K G   D  +CN  ++MY+KC
Sbjct: 391 SQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKC 450

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            +LN +   F  + + AD VSWNT+++ CL  N   + L   + M  S  + D+V+L++ 
Sbjct: 451 SNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNV 510

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +S  +     G  IH   +K G      +SV+N+LI+MY++CG +E A + F  +   
Sbjct: 511 LVSSGQIASYEVGSQIHCFIMKSGLNLD--ISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SW+++I G+A  G  +EAF+L   M+ +  V+P+  T V +++ C+   ++ EG  +
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGL-GVKPNEITFVGILTACSHIGMVEEGLKL 627

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +     R +  D  +  +      ++D  +++  L  AE     +  + D+V W ++++ 
Sbjct: 628 Y-----RTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAA 682



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 237/505 (46%), Gaps = 36/505 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A L    +L++ Y+  S    ++ +F     KD+++W +MI    +    +  L  F 
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFR 289

Query: 63  EMVEEGI----RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD----SSLCNVF 114
           EM+ + +     F   +     S L + +C   GR +H L IK G+ +D     SLC   
Sbjct: 290 EMLSQSVYQPNEFVFGSAFSACSKLLEPDC---GRQIHGLCIKFGLGSDLFAGCSLC--- 343

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
            +MYAKCG L S+   F  +   D V+WN I++G    +  ++   +F +M  +G   ++
Sbjct: 344 -DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERA 233
           V++ S + A +    L++G  +H+  +K+G+  D P   V NSL+SMYS+C ++  A + 
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP---VCNSLLSMYSKCSNLNDALQV 459

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           F  +  K D+VSWN ++       +  E   L   M   R ++PD  T+  ++       
Sbjct: 460 FEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR-IKPDHVTLTNVLVSSGQIA 518

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               G  +H + ++  L  D+ + N+L++ Y+K  SL  A  +F++I    D++SW+S+I
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN-PDIISWSSLI 577

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGF 399
            G            LF+ M  L  + +  T + IL +C+    +E G K     Q     
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           S      + ++ +    G L  A   ++++    D   W  ++ AC  +G+ +   +  +
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE 697

Query: 460 SMTQ-QQNASPDSVTLVNVISACGN 483
           ++ +   + S   V L N+ ++ G+
Sbjct: 698 NVLKIDPSNSAAVVMLCNIHASSGH 722



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           GF   +P   SLL+ YS  S    +L +F +  NK D+V+WN ++TAC++       L  
Sbjct: 432 GFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL 491

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M    I+ D  TL  ++ +  Q+   + G  +HC  +K+G+  D S+ N  +NMY K
Sbjct: 492 TKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTK 551

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  +   D +SW++++ G       ++    FR M   G + + ++    
Sbjct: 552 CGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGI 611

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           + A + +G +  G  ++   ++  Y  SP     + ++ + ++ G ++ AE     M   
Sbjct: 612 LTACSHIGMVEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFV 670

Query: 240 KDVVSWNAIIDGFALNGKFE 259
            DVV W  ++    ++G  E
Sbjct: 671 PDVVVWKTLLAACKVHGNLE 690


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 193/590 (32%), Positives = 299/590 (50%), Gaps = 38/590 (6%)

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           ++  G +E A + F  M   D   WN +I GF   G + EA  L   M +   V+ D  T
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRM-VFSGVKADSFT 128

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
              +I        L EG+ +H   I+     D+ + NSL+  Y K      AE +F  + 
Sbjct: 129 YPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEM- 187

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
           P  D+VSWNSMISG            LFKEML    +    + ++ L +C+   S   GK
Sbjct: 188 PERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGK 247

Query: 389 SIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            +HC  ++       + V  +++ MY   G++  A  + + I    +   WN++I    +
Sbjct: 248 ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQR-NIVAWNVLIGCYAR 306

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           N    +A   F+ M++Q    PD +TL+N++ AC  LE    G+++HG A++        
Sbjct: 307 NSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIV 362

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---E 564
           +  ALI MYG    +KSA  +F+     NL +WN +I+A+ QN     ALELF+ L    
Sbjct: 363 LDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSS 422

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
             P+  +I SIL A  +   L  G+QIH ++    +  N+ I ++L+ MY+ C       
Sbjct: 423 LLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDAR 482

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K   +W+S+I AY  HG G  ++ LF EM  S + P KS+  SLL+ACS SG
Sbjct: 483 KCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISG 542

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           +VDEG +Y+ +M  EY + P  EH+  ++D++GR+G    A  FI+ +P  P   +WG++
Sbjct: 543 MVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSL 602

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           L+A  +H D  + +  AE +FK+E +N G Y+ L NMY    RW+D   I
Sbjct: 603 LNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRI 652



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 284/567 (50%), Gaps = 25/567 (4%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P  T  L  +++    E +L LF E    D   WN MI            L  +  MV  
Sbjct: 61  PALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFS 120

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ DS T   ++ ++T ++ L++G+ +H + IK   ++D  +CN  +++Y K G    +
Sbjct: 121 GVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDA 180

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  M   D VSWN+++SG L      + L+ F+EM   G + D  S  SA+ A + +
Sbjct: 181 EKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHV 240

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
              + GK +H   ++   E    V V  S++ MYS+ G++  AER F  +  +++V+WN 
Sbjct: 241 YSPNMGKELHCHAVRSRIETGD-VMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNV 299

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +A N +  +AF    +M     ++PD+ T++ L+  CA    + EGR++HGYA+RR
Sbjct: 300 LIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRR 355

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------- 357
                +++  +L+D Y +   L  AE++F+ IA  N L+SWNS+I+   +          
Sbjct: 356 GFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKN-LISWNSIIAAYVQNGKNYSALEL 414

Query: 358 -EMLYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            + L+  S    ST +A ILP+     SL  G+ IH + +K  + +NTI +N+L+HMY  
Sbjct: 415 FQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAM 474

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGDL  A      +    D   WN +I+A   +G  + ++  F  M   +   P+  T  
Sbjct: 475 CGDLEDARKCFNHVLLK-DVVSWNSIIMAYAVHGFGRISVCLFSEMIASK-VDPNKSTFA 532

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST-VFESC 532
           ++++AC    +  EG   +  ++K   G+D  +++   ++ + GR  +  SA   + E  
Sbjct: 533 SLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALEL 559
           +      W  +++A S+N  ++   E 
Sbjct: 592 FLPTARIWGSLLNA-SRNHNDITVAEF 617



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 200/391 (51%), Gaps = 22/391 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F++ +    SL++ Y  +     +  +F E   +D+V+WN+MI+  +        L  F 
Sbjct: 157 FVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFK 216

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKC 121
           EM++ G + D  + +  + A + +     G+ +HC ++++ +   D  +    ++MY+K 
Sbjct: 217 EMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKY 276

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSGEQADNVSLSSA 180
           G+++ +E  F  +   + V+WN ++     N+      L F++M   +G Q D ++L + 
Sbjct: 277 GEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINL 336

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L     G+ IH   ++ G+   P++ +  +LI MY + G +++AE  F  +  K
Sbjct: 337 LPACAILE----GRTIHGYAMRRGF--LPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEK 390

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +++SWN+II  +  NGK   A +L  ++    S+ PD  T+ +++   A+SL L EGR +
Sbjct: 391 NLISWNSIIAAYVQNGKNYSALELFQKL-WDSSLLPDSTTIASILPAYAESLSLSEGRQI 449

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y ++   G + +++NSL+  Y+    L  A   FN +  + D+VSWNS+I        
Sbjct: 450 HAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVL-LKDVVSWNSIIMAYAVHGF 508

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCN 379
                 LF EM+      + ST  ++L +C+
Sbjct: 509 GRISVCLFSEMIASKVDPNKSTFASLLAACS 539



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 114/232 (49%), Gaps = 1/232 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGFL H+   T+L+  Y      +S+  +F     K++++WN++I A V+N      L  
Sbjct: 355 RGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALEL 414

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F ++ +  +  DSTT+  I+ A  +   L +GR +H   +K+   +++ + N  V+MYA 
Sbjct: 415 FQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAM 474

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGDL  +   F+ +   D VSWN+I+     + +    +  F EM  S    +  + +S 
Sbjct: 475 CGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASL 534

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           +AA +  G +  G   +   +K  Y   P +     ++ +  + G+  +A+R
Sbjct: 535 LAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKR 585


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 177/600 (29%), Positives = 312/600 (52%), Gaps = 40/600 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+LI ++S CG++  A + F  +  K VV+WNAII G+A  G  +EAF L  +M +  ++
Sbjct: 100 NTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQM-VDEAM 158

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           EP I T + ++  C+    L+ G+  H   I+     D  +  +L+  Y K  S+  A  
Sbjct: 159 EPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQ 218

Query: 335 LFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPE 382
           +F+ +    D+ ++N MI G  K        ++ Y   Q  F     + L+IL  C++PE
Sbjct: 219 VFDGLYK-RDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPE 277

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +L +GK++H   +  G  ++     AL+ MY+ CG +  A  +  ++    D   W ++I
Sbjct: 278 ALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMI 336

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSLHGLALK 499
               +N + ++A   F +M Q++   PD +T +++I+AC    +L LA E   +H   ++
Sbjct: 337 RGYAENSNIEDAFGLFATM-QEEGIQPDRITYIHIINACASSADLSLARE---IHSQVVR 392

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           +  G D  V  AL+ MY +C  IK A  VF++    ++ +W+ MI A+ +N     A E 
Sbjct: 393 AGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFET 452

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM--- 613
           F  ++    EP+ ++ +++L+AC  LG L  G +I+          +  + +AL++M   
Sbjct: 453 FHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVK 512

Query: 614 ----------YSNC--KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
                     + N   +    W+ MI  Y  HG   EA++LF  M     RP   + + +
Sbjct: 513 HGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGV 572

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACS +G V+EG ++++ +L+   + P  E + C+VD+LGR+G+L EA   I  +P++P
Sbjct: 573 LSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKP 632

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              +W  +L+AC  +G+  + ++ AE     EP +   Y+ LS+MY A G W++  ++ K
Sbjct: 633 NSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRK 692



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 182/683 (26%), Positives = 310/683 (45%), Gaps = 56/683 (8%)

Query: 33  TCNKDVVT--WNAMITACVEN---RCVVMG-------LHFFGEMVEEGIRFDSTTLLIIV 80
           T NK VV   W   +   V++   R +  G       LH  GE        DS T + + 
Sbjct: 12  TANKAVVAGRWCGFLQQPVQSARCRSIFTGQVGANDVLHRLGEGSNH---IDSRTYVKLF 68

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
                +     G+ V    I++G   +    N  + +++ CG++  +  TF  +     V
Sbjct: 69  QRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVV 128

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           +WN I++G     + ++    FR+M     +   ++    + A +    L  GK  HA  
Sbjct: 129 TWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQV 188

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           IK+G+       +  +L+SMY + G ++ A + F G+  +DV ++N +I G+A +G  E+
Sbjct: 189 IKVGFVSD--FRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEK 246

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L + MQ     +P+  + ++++  C+    L  G++VH   +   L  D+ +  +L+
Sbjct: 247 AFQLFYRMQ-QEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALI 305

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSF 368
             Y    S+  A  +F+ +  + D+VSW  MI             GLF  M     Q   
Sbjct: 306 RMYMGCGSIEGARRVFDKM-KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDR 364

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            T + I+ +C S   L   + IH   ++ GF  + +   AL+HMY  CG +  A  +   
Sbjct: 365 ITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDA 424

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +S   D   W+ +I A  +NG  +EA +TF  M ++ N  PD VT +N+++ACG+L    
Sbjct: 425 MSRR-DVVSWSAMIGAYVENGCGEEAFETFHLM-KRNNVEPDVVTYINLLNACGHLGALD 482

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G  ++  A+K+ +     V NALI M  +   I+ A  +FE+    ++ TWN MI  +S
Sbjct: 483 LGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYS 542

Query: 549 QNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
            +     AL+LF  +    F PN ++ V +LSAC++ G +  G++               
Sbjct: 543 LHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFF------------- 589

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
             S LLD      +   +  M+   G  G+  EA  L + M    ++P  S   +LL+AC
Sbjct: 590 --SYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP---LKPNSSIWSTLLAAC 644

Query: 666 SHSGLVDEGLQYYNN--MLEEYD 686
              G +D   +      M E YD
Sbjct: 645 RIYGNLDVAERAAERCLMSEPYD 667



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 215/472 (45%), Gaps = 29/472 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++     T+L++ Y      + +  +F     +DV T+N MI    ++         F
Sbjct: 192 GFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLF 251

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +EG + +  + L I+   +    L  G+ VH   +  G++ D  +    + MY  C
Sbjct: 252 YRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGC 311

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   D VSW  ++ G   N+  E     F  M   G Q D ++    +
Sbjct: 312 GSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHII 371

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A   +LS  + IH+  ++ G+     + V  +L+ MY++CG I+ A + F  M+ +D
Sbjct: 372 NACASSADLSLAREIHSQVVRAGFGTD--LLVDTALVHMYAKCGAIKDARQVFDAMSRRD 429

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+A+I  +  NG  EEAF+  H M+   +VEPD+ T + L++ C     L  G  ++
Sbjct: 430 VVSWSAMIGAYVENGCGEEAFETFHLMK-RNNVEPDVVTYINLLNACGHLGALDLGMEIY 488

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             AI+  L   + + N+L++   K  S+ +A  +F  +    D+V+WN MI G       
Sbjct: 489 TQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMV-QRDVVTWNVMIGGYSLHGNA 547

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  ML    + +  T + +L +C+    +E G+    + L      +  G+   
Sbjct: 548 REALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLL------DGRGIVPT 601

Query: 410 MHMY-------INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           M +Y          G+L  A  L+ R+    ++S W+ ++ AC   G+   A
Sbjct: 602 MELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVA 653



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 54/363 (14%)

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DS T V +   C  L  A  GK +    ++S   L+    N LI ++  C ++  A   F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           +S  N  + TWN +I+ ++Q      A  LFR +     EP+ I+ + +L AC+    L+
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GK+ H  V  +GF  +  I +AL+ MY                  +  + ++ MI  Y 
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS----------------HSGLVDE-- 673
             G G +A +LF+ M   G +P + S +S+L  CS                ++GLVD+  
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299

Query: 674 -------------GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP-- 718
                         ++    + ++  VR      V ++     +  +++A+     +   
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTV-MIRGYAENSNIEDAFGLFATMQEE 358

Query: 719 -IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-PENVGYYISLSNMYVALGRWKDA 776
            IQP    +  +++AC+   D  + +++   + +     ++    +L +MY   G  KDA
Sbjct: 359 GIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDA 418

Query: 777 VEI 779
            ++
Sbjct: 419 RQV 421


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 220/793 (27%), Positives = 367/793 (46%), Gaps = 78/793 (9%)

Query: 48  CVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD 107
           C +   + +G      M+  G R   TT +        +NCL Q        + A M+ D
Sbjct: 16  CAKQGALELGKQAHAHMIISGFR--PTTFV--------LNCLLQVYTNSRDFVSASMVFD 65

Query: 108 SSLC------NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLY 161
                     N  +N Y+K  D+  +   F+ M   D VSWN+++SG L N    K +  
Sbjct: 66  KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 125

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           F +MG  G + D  + +  +   + L + S G  IH + +++G +    V   ++L+ MY
Sbjct: 126 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD--VVAASALLDMY 183

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
           ++      + R F G+  K+ VSW+AII G   N     A     EMQ    V   ++  
Sbjct: 184 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ---KVNAGVSQS 240

Query: 282 V--TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           +  +++  CA    LR G  +H +A++     D ++  + +D Y+K +++  A++LF+  
Sbjct: 241 IYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNS 300

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
             +N   S+N+MI+G            LF  ++     F   +L  +  +C   + L  G
Sbjct: 301 ENLNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 359

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             I+   +K   S +    NA + MY  C  L  AF +   +    D   WN +I A  Q
Sbjct: 360 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQ 418

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG   E +  F SM + +   PD  T  +++ AC    L + G  +H   +KS M  ++ 
Sbjct: 419 NGKGYETLFLFVSMLRSR-IEPDEFTFGSILKACTGGSLGY-GMEIHSSIVKSGMASNSS 476

Query: 508 VQNALITMYGRCRDIKSASTV----------------FESCYNCNL----CTWNCMISAF 547
           V  +LI MY +C  I+ A  +                 E  +N  L     +WN +IS +
Sbjct: 477 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 536

Query: 548 SQNKAEVRALELF-RHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
              +    A  LF R +E    P++ +  ++L  C  L     GKQIH  V     Q + 
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 596

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +I S L+DMYS C               +    W++MI  Y +HGKG EAI+LF  M   
Sbjct: 597 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            I+P   + IS+L AC+H GL+D+GL+Y+  M  +Y + P+  H+  +VD+LG+SGK++ 
Sbjct: 657 NIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKR 716

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACS-HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           A E I+ +P +    +W  +L  C+ H  + ++ ++    L +L+P++   Y  LSN+Y 
Sbjct: 717 ALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYA 776

Query: 769 ALGRWKDAVEIGK 781
             G W+   ++ +
Sbjct: 777 DAGMWEKVSDLRR 789



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 178/674 (26%), Positives = 301/674 (44%), Gaps = 67/674 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           ++  YS  +    + + F     +DVV+WN+M++  ++N   +  +  F +M  EGI FD
Sbjct: 78  MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 137

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T  II+   + +     G  +H + ++ G   D    +  ++MYAK      S   F 
Sbjct: 138 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 197

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS-----ACL 187
           G+   ++VSW+ I++GC+ NN     L +F+EM     Q  N  +S ++ AS     A L
Sbjct: 198 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-----QKVNAGVSQSIYASVLRSCAAL 252

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            EL  G  +HA  +K  +     V      + MY++C +++ A+  F      +  S+NA
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTAT--LDMYAKCDNMQDAQILFDNSENLNRQSYNA 310

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +I G++      +A  L H  +LM S +  D  ++  +   CA    L EG  ++G AI+
Sbjct: 311 MITGYSQEEHGFKALLLFH--RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  D+ + N+ +D Y K  +L++A  +F+ +    D VSWN++I+             
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLF 427

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF  ML    +    T  +IL +C    SL +G  IH   +K G ++N+    +L+ MY 
Sbjct: 428 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 415 NCGDLVAAFSLLQRISHNSDTS-------------------CWNIVIVACTQNGHFQEAI 455
            CG +  A  +  R    ++ S                    WN +I         ++A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F  M  +   +PD  T   V+  C NL  A  GK +H   +K  +  D  + + L+ M
Sbjct: 547 MLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 605

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C D+  +  +FE     +  TWN MI  ++ +     A++LF  +  E   PN ++ 
Sbjct: 606 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 665

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           +SIL AC  +G++  G +      +    +  +     L  YSN         M+   G 
Sbjct: 666 ISILRACAHMGLIDKGLE------YFYMMKRDYGLDPQLPHYSN---------MVDILGK 710

Query: 633 HGKGWEAIELFHEM 646
            GK   A+EL  EM
Sbjct: 711 SGKVKRALELIREM 724



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 163/606 (26%), Positives = 272/606 (44%), Gaps = 73/606 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +++LL  Y+    F  SL +F     K+ V+W+A+I  CV+N  + + L FF EM +  
Sbjct: 175 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 234

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                +    ++ +   ++ L+ G  +H  ++K+   AD  +    ++MYAKC ++  ++
Sbjct: 235 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 294

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      +  S+N +++G     +  K LL F  +  SG   D +SLS    A A + 
Sbjct: 295 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 354

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            LS G  I+ L IK     S  V V N+ I MY +C  +  A R F  M  +D VSWNAI
Sbjct: 355 GLSEGLQIYGLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 412

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     NGK  E   L   M L   +EPD  T  +++  C     L  G  +H   ++  
Sbjct: 413 IAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSG 470

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLF-------NAIAPMNDL------------VSWN 349
           +  +  +  SL+D YSK   + +AE +        N    M +L            VSWN
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 530

Query: 350 SMISG------------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           S+ISG            LF  M+ +     +F+++T   +L +C +  S   GK IH   
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT---VLDTCANLASAGLGKQIHAQV 587

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K    ++    + L+ MY  CGDL  +  + ++ S   D   WN +I     +G  +EA
Sbjct: 588 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 646

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I+ F+ M   +N  P+ VT ++++ AC ++ L  +G     + +K   GLD ++ +    
Sbjct: 647 IQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYFYM-MKRDYGLDPQLPH---- 700

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                                    ++ M+    ++    RALEL R + FE +++   +
Sbjct: 701 -------------------------YSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 735

Query: 575 ILSACT 580
           +L  CT
Sbjct: 736 LLGVCT 741


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 176/592 (29%), Positives = 311/592 (52%), Gaps = 40/592 (6%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY +CG +  A   F  +   + VSW  I+  FA NG + EA      M ++  + PD A
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRM-VLEGLRPDGA 59

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
             V  I +C+ S  L++G+ +H   +  +LL +D+++  +L+  Y++   L  A   F+ 
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 339 IAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF------------ 386
           +     LV+WN++I+G  +   +  +   +  +++  P    P+++ F            
Sbjct: 120 MGKKT-LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178

Query: 387 ---GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
              G+ I    +  G+++++I  NAL++MY  CG L +A  +  R+  N D   WN +I 
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK-NRDVIAWNTMIS 237

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              + G   +A++ F+ M    +  P+ VT + +++AC NLE   +G+++H    +    
Sbjct: 238 GYAKQGAATQALELFQRMGPN-DPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296

Query: 504 LDTRVQNALITMYGRCRD-IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            D  + N L+ MY +C   ++ A  VFE     ++ TWN +I A+ Q      AL++F+ 
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           ++ E   PNEI++ ++LSAC  LG  R GK +H  +     + +  + ++L++MY+ C  
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        KS  +WS++I+AY  HG     +E F E+   G+     +++S LSA
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH G++ EG+Q + +M+ ++ + P+  H +C+VD+L R+G+L+ A   I ++P  P   
Sbjct: 477 CSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAV 536

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKD 775
            W ++LS C  H DTK   +VA+ LF+LE E+    ++ LSN+Y   GRW D
Sbjct: 537 AWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD 588



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 256/492 (52%), Gaps = 22/492 (4%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCG +  +   F  +   ++VSW  I++    N +  + L Y+R M   G + D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              A+   +   +L  G+++HA+ ++    +   + +  +LI+MY++C D+E A + F  
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDII-LGTALITMYARCRDLELARKTFDE 119

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLL 294
           M  K +V+WNA+I G++ NG    A  +  +M  +    ++PD  T  + +  C+    +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +GR +    +      D ++ N+L++ YSK  SL  A  +F+ +    D+++WN+MISG
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISG 238

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       LF+ M     + +  T + +L +C + E LE G++IH    + G+ ++
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 403 TIGVNALMHMYINC-GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            +  N L++MY  C   L  A  + +R+    D   WNI+IVA  Q G  ++A+  FK M
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERL-RTRDVITWNILIVAYVQYGQAKDALDIFKQM 357

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q +N +P+ +TL NV+SAC  L    +GK++H L        D  ++N+L+ MY RC  
Sbjct: 358 -QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGS 416

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           +     VF +  + +L +W+ +I+A++Q+      LE F  L  E    +++++VS LSA
Sbjct: 417 LDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSA 476

Query: 579 CTQLGVLRHGKQ 590
           C+  G+L+ G Q
Sbjct: 477 CSHGGMLKEGVQ 488



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 287/616 (46%), Gaps = 53/616 (8%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y        +LA+F+   + + V+W  ++ A   N      L ++  MV EG+R D    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           ++ +   +    LKQG+++H + ++  ++  D  L    + MYA+C DL  +  TF  M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLSSAVAASACLGELSY 192
               V+WN +++G   N      L  +++M      G + D ++ SSA+ A + +G++S 
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ I A  +  GY     V   N+LI+MYS+CG +E+A + F  +  +DV++WN +I G+
Sbjct: 182 GREIEARTVASGYASDSIVQ--NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A  G   +A +L   M      +P++ T + L++ C +   L +GR++H          D
Sbjct: 240 AKQGAATQALELFQRMG-PNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298

Query: 313 LLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF 366
           L++ N L++ Y+K S+SL +A  +F  +    D+++WN +I      G  K+ L +  Q 
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLR-TRDVITWNILIVAYVQYGQAKDALDIFKQM 357

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     TL  +L +C    +   GK++H          + +  N+LM+MY  CG L
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
                +   I   S  S W+ +I A  Q+GH +  ++ F  + Q+  A+ D VT+V+ +S
Sbjct: 418 DDTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTGLEHFWELLQEGLAA-DDVTMVSTLS 475

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +  +  EG       ++S +        +++  +G   D +                
Sbjct: 476 ACSHGGMLKEG-------VQSFL--------SMVGDHGLAPDYRH--------------- 505

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           + CM+   S+      A  L   + F P+ ++  S+LS C      +   ++   +F L 
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565

Query: 600 FQENSFISSALLDMYS 615
            ++     + L ++Y+
Sbjct: 566 SEDEHSTVTLLSNVYA 581



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 236/492 (47%), Gaps = 23/492 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV---EE 67
           T+L+T Y+     E +   F E   K +VTWNA+I     N      L  + +MV    E
Sbjct: 98  TALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE 157

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G++ D+ T    + A + +  + QGR +   ++ +G  +DS + N  +NMY+KCG L S+
Sbjct: 158 GMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESA 217

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   D ++WNT++SG        + L  F+ MG +  + + V+    + A   L
Sbjct: 218 RKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNL 277

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWN 246
            +L  G+ IH    + GYE    + + N L++MY++C   +E A + F  +  +DV++WN
Sbjct: 278 EDLEQGRAIHRKVKEHGYESD--LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWN 335

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I  +   G+ ++A D+  +MQL  +V P+  T+  ++S CA     R+G++VH     
Sbjct: 336 ILIVAYVQYGQAKDALDIFKQMQL-ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI----------SGL- 355
                D+++ NSLM+ Y++  SL     +F AI     LVSW+++I          +GL 
Sbjct: 395 GRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD-KSLVSWSTLIAAYAQHGHSRTGLE 453

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMY 413
            F E+L         T+++ L +C+    L+ G +S        G + +      ++ + 
Sbjct: 454 HFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLL 513

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-V 472
              G L AA +L+  +    D   W  ++  C  +   + A +    + + ++    S V
Sbjct: 514 SRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTV 573

Query: 473 TLV-NVISACGN 483
           TL+ NV +  G 
Sbjct: 574 TLLSNVYAEAGR 585



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 170/355 (47%), Gaps = 5/355 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ +      +L+  YS     ES+  +F    N+DV+ WN MI+   +       L  F
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M     + +  T + +++A T +  L+QGR +H    + G  +D  + NV +NMY KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC 312

Query: 122 -GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L  +   F  +   D ++WN ++   +     +  L  F++M       + ++LS+ 
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A LG    GK +HAL I  G   +  V + NSL++MY++CG ++     F  +  K
Sbjct: 373 LSACAVLGAKRQGKAVHAL-IASGRCKADVV-LENSLMNMYNRCGSLDDTVGVFAAIRDK 430

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RS 299
            +VSW+ +I  +A +G      +   E+ L   +  D  T+V+ +S C+   +L+EG +S
Sbjct: 431 SLVSWSTLIAAYAQHGHSRTGLEHFWEL-LQEGLAADDVTMVSTLSACSHGGMLKEGVQS 489

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
                    L  D      ++D  S++  L  AE L + +  + D V+W S++SG
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSG 544



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 5/287 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSY-FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G+ + L     LL  Y+  S   E +  +F     +DV+TWN +I A V+       L  
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDI 353

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  E +  +  TL  ++SA   +   +QG+ VH L       AD  L N  +NMY +
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNR 413

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ +   F+ +     VSW+T+++    + +    L +F E+   G  AD+V++ S 
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           ++A +  G L  G V   L +   +  +P       ++ + S+ G +EAAE     M   
Sbjct: 474 LSACSHGGMLKEG-VQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            D V+W +++ G  L+   + A  +  ++  + S   D  + VTL+S
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELES--EDEHSTVTLLS 577


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 200/679 (29%), Positives = 347/679 (51%), Gaps = 49/679 (7%)

Query: 136 CADTVSW---NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           C  TV +   + I+S C  N + E    +      S     +V+ +  + A + L  L +
Sbjct: 57  CPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEH 116

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH   +   Y+  P + + N ++SMY +CG ++ A   F  M  K+VVSW ++I G+
Sbjct: 117 GRKIHRHMLTCNYQ--PDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGY 174

Query: 253 ALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  G+ + A  L   +Q++RS   PD  T  +++  C+     +  R +H + ++   G 
Sbjct: 175 SRYGEEDNAITLY--VQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGA 232

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           DL+  N+L+  Y+K + ++ A  +F+ I  + DL+SW SMI+G             F+EM
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRII-IKDLISWGSMIAGFSQLGYELEALCHFREM 291

Query: 360 L----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           L    Y  ++F F +  +   +C+     + G+ IH   +K G  ++     +L  MY  
Sbjct: 292 LSQSVYQPNEFVFGSAFS---ACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAK 348

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L +A ++   I    D   WN +I       + +E+  +F S  +     P+ VT++
Sbjct: 349 CGFLESARTVFYHIE-KPDLVAWNAIIAGFASVSNAKES-SSFFSQMRHTGLVPNDVTVL 406

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN- 534
           +++ AC    +   G  +H   +K    LD  V N+L++MY +C ++  A  VFE   N 
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466

Query: 535 CNLCTWNCMISA-FSQNKAE--VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
            ++ +WN +++A   QN+A   +R  +L      +P+ +++ ++L +  Q+     G QI
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQI 526

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKG 636
           H  +   G   +  +S+AL++MY+ C S                 +WSS+I  Y   G G
Sbjct: 527 HCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCG 586

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            EA ELF  M   G++P + + + +L+ACSH G+V+EGL+ Y  M E+Y + P  EH  C
Sbjct: 587 KEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSC 646

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+L R+G L  A +FI+ +P  P   VW  +L+AC  HG+ ++GK+ AE + K++P N
Sbjct: 647 MVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSN 706

Query: 757 VGYYISLSNMYVALGRWKD 775
               + L N++ + G WKD
Sbjct: 707 SAAVVMLCNIHASSGHWKD 725



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 263/535 (49%), Gaps = 19/535 (3%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           S T   +++A + +  L+ GR +H   +      D  L N  ++MY KCG L  +   F 
Sbjct: 98  SVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFD 157

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW +++SG       +  +  + +M  SG   D+ +  S V + + L +   
Sbjct: 158 SMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKL 217

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            + +HA  +K   E    +   N+LISMY++   +  A   F  +  KD++SW ++I GF
Sbjct: 218 ARQLHAHVLK--SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           +  G   EA     EM      +P+     +  S C+  L    GR +HG  I+  LG D
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L    SL D Y+K   L  A  +F  I    DLV+WN++I+G             F +M 
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEK-PDLVAWNAIIAGFASVSNAKESSSFFSQMR 394

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           +     +  T+L++L +C+ P  L  G  +H + +K+GF+ +    N+L+ MY  C +L 
Sbjct: 395 HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLN 454

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  + + I + +D   WN ++ AC Q     E ++  K M   +   PD VTL NV+ +
Sbjct: 455 DALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR-IKPDHVTLTNVLVS 513

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
            G +     G  +H   +KS + LD  V NALI MY +C  ++ A  +F+S  N ++ +W
Sbjct: 514 SGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
           + +I  ++Q      A ELFR +     +PNEI+ V IL+AC+ +G++  G +++
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 279/600 (46%), Gaps = 50/600 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L+ Y      + +  +F     K+VV+W +MI+           +  + +M+  G   D
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   IV + + ++  K  R +H   +K+   AD    N  ++MY K   +  +   FS
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELS 191
            +   D +SW ++++G     Y  + L +FREM   S  Q +     SA +A + L E  
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH L IK G     +     SL  MY++CG +E+A   F+ +   D+V+WNAII G
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGC--SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAG 376

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA     +E+     +M+    + P+  TV++L+  C++ ++L  G  VH Y ++     
Sbjct: 377 FASVSNAKESSSFFSQMR-HTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
           D+ + NSL+  YSK ++L+ A  +F  I    D+VSWN++++   +     E+L L ++ 
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL-TKL 494

Query: 367 SFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
            F+        TL  +L S     S E G  IHC+ +K G + +    NAL++MY  CG 
Sbjct: 495 MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGS 554

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +   I  N D   W+ +IV   Q G  +EA + F++M +     P+ +T V ++
Sbjct: 555 LECARKMFDSIG-NPDIISWSSLIVGYAQAGCGKEAFELFRTM-RGLGVKPNEITFVGIL 612

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +AC ++ +  E     GL L   M  D R+                 S   E C      
Sbjct: 613 TACSHIGMVEE-----GLKLYRTMQEDYRI-----------------SPTKEHC------ 644

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
             +CM+   ++      A +  R + F P+ +   ++L+AC   G L  GK+   +V  +
Sbjct: 645 --SCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKI 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 182/360 (50%), Gaps = 15/360 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    SL   Y+   + ES+  +FY     D+V WNA+I              FF
Sbjct: 331 GLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFF 390

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  +  T+L ++ A ++   L  G  VH   +K G   D  +CN  ++MY+KC
Sbjct: 391 SQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKC 450

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            +LN +   F  + + AD VSWNT+++ CL  N   + L   + M  S  + D+V+L++ 
Sbjct: 451 SNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNV 510

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +S  +     G  IH   +K G      +SV+N+LI+MY++CG +E A + F  +   
Sbjct: 511 LVSSGQIASYEVGSQIHCFIMKSGLNLD--ISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SW+++I G+A  G  +EAF+L   M+ +  V+P+  T V +++ C+   ++ EG  +
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGL-GVKPNEITFVGILTACSHIGMVEEGLKL 627

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +     R +  D  +  +      ++D  +++  L  AE     +  + D+V W ++++ 
Sbjct: 628 Y-----RTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAA 682



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 237/505 (46%), Gaps = 36/505 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A L    +L++ Y+  S    ++ +F     KD+++W +MI    +    +  L  F 
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFR 289

Query: 63  EMVEEGI----RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD----SSLCNVF 114
           EM+ + +     F   +     S L + +C   GR +H L IK G+ +D     SLC   
Sbjct: 290 EMLSQSVYQPNEFVFGSAFSACSKLLEPDC---GRQIHGLCIKFGLGSDLFAGCSLC--- 343

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
            +MYAKCG L S+   F  +   D V+WN I++G    +  ++   +F +M  +G   ++
Sbjct: 344 -DMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERA 233
           V++ S + A +    L++G  +H+  +K+G+  D P   V NSL+SMYS+C ++  A + 
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP---VCNSLLSMYSKCSNLNDALQV 459

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           F  +  K D+VSWN ++       +  E   L   M   R ++PD  T+  ++       
Sbjct: 460 FEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASR-IKPDHVTLTNVLVSSGQIA 518

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               G  +H + ++  L  D+ + N+L++ Y+K  SL  A  +F++I    D++SW+S+I
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN-PDIISWSSLI 577

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGF 399
            G            LF+ M  L  + +  T + IL +C+    +E G K     Q     
Sbjct: 578 VGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRI 637

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           S      + ++ +    G L  A   ++++    D   W  ++ AC  +G+ +   +  +
Sbjct: 638 SPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE 697

Query: 460 SMTQ-QQNASPDSVTLVNVISACGN 483
           ++ +   + S   V L N+ ++ G+
Sbjct: 698 NVLKIDPSNSAAVVMLCNIHASSGH 722



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 3/260 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           GF   +P   SLL+ YS  S    +L +F +  NK D+V+WN ++TAC++       L  
Sbjct: 432 GFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRL 491

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M    I+ D  TL  ++ +  Q+   + G  +HC  +K+G+  D S+ N  +NMY K
Sbjct: 492 TKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTK 551

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  +   D +SW++++ G       ++    FR M   G + + ++    
Sbjct: 552 CGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGI 611

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-C 239
           + A + +G +  G  ++   ++  Y  SP     + ++ + ++ G ++ AE     M   
Sbjct: 612 LTACSHIGMVEEGLKLYR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFV 670

Query: 240 KDVVSWNAIIDGFALNGKFE 259
            DVV W  ++    ++G  E
Sbjct: 671 PDVVVWKTLLAACKVHGNLE 690


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 177/562 (31%), Positives = 304/562 (54%), Gaps = 36/562 (6%)

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++ GFA  G +   F    E  L+R    PD  T+  +I  C D   L+ GR +H    +
Sbjct: 1   MVGGFAKVGDYINCFGTFRE--LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYK 58

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  D  +  +L+D Y K   +  A  LF+ +    DLV+W  MI G            
Sbjct: 59  FGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQE-RDLVTWTVMIGGYAECGKANESLV 117

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF++M           ++ ++ +C    ++   + I  +  +  F  + I   A++ MY 
Sbjct: 118 LFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 177

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG + +A  +  R+   +  S W+ +I A   +G  ++A+  F+ M       PD +TL
Sbjct: 178 KCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHGQGRKALDLFRMMLSS-GMLPDKITL 235

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            +++ AC +L+    G+ +H +  K  + LD  V  AL+ MYG+CR+I+ A  +F+    
Sbjct: 236 ASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPE 295

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            +L TW  MI  +++      +L LF  +  E   P+++++V+++ AC +LG +   + I
Sbjct: 296 RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 355

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
             ++    FQ +  + +A++DM++ C               K+  +WS+MI+AYGYHG+G
Sbjct: 356 DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 415

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +A++LF  M  SGI P K +++SLL ACSH+GLV+EGL++++ M E+Y VR + +H+ C
Sbjct: 416 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 475

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+LGR+G+L EA + I+++ ++   G+WGA L AC  H D  + ++ A  L +L+P+N
Sbjct: 476 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQN 535

Query: 757 VGYYISLSNMYVALGRWKDAVE 778
            G+YI LSN+Y   GRW+D  +
Sbjct: 536 PGHYILLSNIYANAGRWEDVAK 557



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 157/628 (25%), Positives = 290/628 (46%), Gaps = 53/628 (8%)

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
           C   FRE+   G + DN +L   + A   L  L  G++IH +  K G +   +V    +L
Sbjct: 14  CFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA--AL 71

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           + MY +C +IE A   F  M  +D+V+W  +I G+A  GK  E+  L  +M+    V PD
Sbjct: 72  VDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR-EEGVVPD 130

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
              +VT++  CA    + + R +  Y  R+    D+++  +++D Y+K   +  A  +F+
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 190

Query: 338 AIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            +   N ++SW++MI+             LF+ ML         TL ++L +C+  ++L+
Sbjct: 191 RMEEKN-VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+ IH    K G   +     AL+ MY  C ++  A  L  ++    D   W ++I   
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DLVTWTVMIGGY 308

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            + G+  E++  F  M +++   PD V +V V+ AC  L    + +++     +    LD
Sbjct: 309 AECGNANESLVLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD 367

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-- 563
             +  A+I M+ +C  ++SA  +F+     N+ +W+ MI+A+  +    +AL+LF  +  
Sbjct: 368 VILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLR 427

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA 622
               PN+I++VS+L AC+  G++  G +     F L +++           YS       
Sbjct: 428 SGILPNKITLVSLLYACSHAGLVEEGLRF----FSLMWED-----------YSVRADVKH 472

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           ++ ++   G  G+  EA++L   M    +   +    + L AC     V    +   ++L
Sbjct: 473 YTCVVDLLGRAGRLDEALKLIESMT---VEKDEGLWGAFLGACRTHKDVVLAEKAATSLL 529

Query: 683 EEYDVRPETEHHVCIVDML----GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH-- 736
           E   ++P+   H  ++  +    GR   + +  + +    ++  PG     +   SH   
Sbjct: 530 E---LQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFS 586

Query: 737 -GDT--KMGKQVAELLFKL--EPENVGY 759
            GDT     K++ E+L  L  + E VGY
Sbjct: 587 VGDTTHPRSKEIYEMLKSLGNKLELVGY 614



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 228/484 (47%), Gaps = 19/484 (3%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++  G R D+ TL  ++ A   +  L+ GR++H +  K G+  D  +C   V+MY K
Sbjct: 18  FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C ++  +   F  M   D V+W  ++ G        + L+ F +M   G   D V++ + 
Sbjct: 78  CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A A LG +   ++I     +  ++    V +  ++I MY++CG +E+A   F  M  K
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLD--VILGTAMIDMYAKCGCVESAREIFDRMEEK 195

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW+A+I  +  +G+  +A DL   M L   + PD  T+ +L+  C+D   L+ GR +
Sbjct: 196 NVISWSAMIAAYGYHGQGRKALDLF-RMMLSSGMLPDKITLASLLYACSDLKNLQMGRLI 254

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H    +  L  D  +  +L+D Y K   +  A  LF+ + P  DLV+W  MI G      
Sbjct: 255 HHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM-PERDLVTWTVMIGGYAECGN 313

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +M           ++ ++ +C    ++   ++I  +  +  F  + I   A
Sbjct: 314 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 373

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ M+  CG + +A  +  R+   +  S W+ +I A   +G  ++A+  F  M  +    
Sbjct: 374 MIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHGQGRKALDLF-PMMLRSGIL 431

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSAST 527
           P+ +TLV+++ AC +  L  EG     L  +   +  D +    ++ + GR   +  A  
Sbjct: 432 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 491

Query: 528 VFES 531
           + ES
Sbjct: 492 LIES 495



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 225/498 (45%), Gaps = 20/498 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            +L+  Y      E +  LF +   +D+VTW  MI    E       L  F +M EEG+ 
Sbjct: 69  AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 128

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D   ++ +V A  ++  + + R++     +     D  L    ++MYAKCG + S+   
Sbjct: 129 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 188

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + +SW+ +++   ++    K L  FR M  SG   D ++L+S + A + L  L
Sbjct: 189 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNL 248

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G++IH +  K G +   +V    +L+ MY +C +IE A   F  M  +D+V+W  +I 
Sbjct: 249 QMGRLIHHIVYKFGLDLDHFVCA--ALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A  G   E+  L  +M+    V PD   +VT++  CA    + + R++  Y  R+   
Sbjct: 307 GYAECGNANESLVLFDKMR-EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ 365

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+++  +++D ++K   +  A  +F+ +   N ++SW++MI+             LF  
Sbjct: 366 LDVILGTAMIDMHAKCGCVESAREIFDRMEEKN-VISWSAMIAAYGYHGQGRKALDLFPM 424

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC--WQLKLGFSNNTIGVNALMHMYINC 416
           ML      +  TL+++L +C+    +E G       W+       +      ++ +    
Sbjct: 425 MLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE-DYSVRADVKHYTCVVDLLGRA 483

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLV 475
           G L  A  L++ ++   D   W   + AC  +     A K   S+ + Q  +P   + L 
Sbjct: 484 GRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLS 543

Query: 476 NVISACGNLELAFEGKSL 493
           N+ +  G  E   + + L
Sbjct: 544 NIYANAGRWEDVAKTRDL 561


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 188/594 (31%), Positives = 315/594 (53%), Gaps = 36/594 (6%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L++ YS  G +E A + F  +     V  NA+++G+  N ++ +  +LL  M     +E
Sbjct: 94  KLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCH-LE 152

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D  T    +  C   L    G  V G A+ + L     + +S+++F  K+  +  A+  
Sbjct: 153 FDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFF 212

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ +    D+V WN MI G            LF +MLY   + S  T+++++ SC    +
Sbjct: 213 FHQMVE-KDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRN 271

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L FGK +H + L  G S +T  +  L+ MY   GD+ +A  + + +   +  S WN++I 
Sbjct: 272 LTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVS-WNVMIS 330

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              QNG   E ++ F+ +    +   DS T+V++I  C        GK LHG   +  + 
Sbjct: 331 GYVQNGLLVETLRLFQKLIMD-DVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLD 389

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           L+  +  A++ +Y +C  +  AS+VFE   N N+ +W  M+   +QN     AL+LF  +
Sbjct: 390 LNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQM 449

Query: 564 EFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-KS 619
           + E    N +++VS++  CT LG+LR G+ +H  +    F     + +AL+DMY+ C K 
Sbjct: 450 QNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKI 509

Query: 620 NAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
           N+A               ++SMIS YG HG G +A+ ++H M   G++P +S+ +SLLSA
Sbjct: 510 NSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSA 569

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSHSGLV+EG+  + NM+++++  P  + + CIVD+L R+G+L++A E I  +P  P  G
Sbjct: 570 CSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSG 629

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           +   +L+ C  H D ++G ++A+ L  LE  N   YI+LSN+Y    RW D+V+
Sbjct: 630 ILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRW-DSVK 682



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 234/494 (47%), Gaps = 17/494 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
            L+ AYS++   E++  +F E      V  NAM+   ++N      +     M    + F
Sbjct: 94  KLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEF 153

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS T    + A   +   + G  V  L++  G+     L +  +N   K GD+  ++  F
Sbjct: 154 DSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFF 213

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D V WN ++ G +      +    F +M ++  +   V++ S + +   +  L+
Sbjct: 214 HQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLT 273

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +H  G  LG+  S    V  +LI MY + GD+E+A   F  M  +++VSWN +I G
Sbjct: 274 FGKCMH--GFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISG 331

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG   E   L  ++ +M  V  D  TVV+LI LC+ +  L  G+ +HG+  RR L  
Sbjct: 332 YVQNGLLVETLRLFQKL-IMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDL 390

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           +L++  +++D Y+K  SL+ A  +F  +   N ++SW +M+ G            LF +M
Sbjct: 391 NLVLPTAIVDLYAKCGSLAYASSVFERMKNKN-VISWTAMLVGLAQNGHARDALKLFDQM 449

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                 F+  TL++++  C     L  G+S+H    +  F++  + + AL+ MY  C  +
Sbjct: 450 QNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKI 509

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +A  + +      D   +N +I     +G   +A+  +  M  ++   P+  T V+++S
Sbjct: 510 NSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRM-NREGLQPNESTFVSLLS 568

Query: 480 ACGNLELAFEGKSL 493
           AC +  L  EG +L
Sbjct: 569 ACSHSGLVEEGIAL 582



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 224/466 (48%), Gaps = 23/466 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
            F++   KDVV WN MI   ++      G + F +M+   I   + T++ ++ +  +M  
Sbjct: 212 FFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRN 271

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G+ +H   +  GM  D+ +    ++MY K GD+ S+   F  M   + VSWN ++SG
Sbjct: 272 LTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISG 331

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + N    + L  F+++       D+ ++ S +   +   +L  GK++H    + G + +
Sbjct: 332 YVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLN 391

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + +  +++ +Y++CG +  A   F  M  K+V+SW A++ G A NG   +A  L  +M
Sbjct: 392 --LVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQM 449

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q  R V  +  T+V+L+  C    LLREGRSVH    R     ++++M +L+D Y+K + 
Sbjct: 450 QNER-VTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSK 508

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           ++ AE++F       D++ +NSMISG            ++  M     Q + ST +++L 
Sbjct: 509 INSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLS 568

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL----MHMYINCGDLVAAFSLLQRISHN 432
           +C+    +E G ++    +K    +NT   + L    + +    G L  A  L+ ++   
Sbjct: 569 ACSHSGLVEEGIALFQNMVK---DHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFT 625

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD-SVTLVNV 477
             +     ++  C  +   +  +K    +   ++ +P   +TL N+
Sbjct: 626 PTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNI 671



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 7/332 (2%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y      ES+  +F    ++++V+WN MI+  V+N  +V  L  F +++ + + 
Sbjct: 295 TTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVG 354

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FDS T++ ++   ++   L  G+++H    + G+  +  L    V++YAKCG L  +   
Sbjct: 355 FDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSV 414

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + +SW  ++ G   N +    L  F +M       + ++L S V     LG L
Sbjct: 415 FERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLL 474

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAII 249
             G+ +HA   +  +     V V  +LI MY++C  I +AE  F +G+T KDV+ +N++I
Sbjct: 475 REGRSVHATLTRFHFASE--VVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 532

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR--R 307
            G+ ++G   +A  + H M     ++P+ +T V+L+S C+ S L+ EG ++    ++   
Sbjct: 533 SGYGMHGLGHKALCVYHRMN-REGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHN 591

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
               D L    ++D  S++  L +AE L N +
Sbjct: 592 TTPTDKLYA-CIVDLLSRAGRLRQAEELINQM 622



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/323 (22%), Positives = 143/323 (44%), Gaps = 9/323 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +L   T+++  Y+       + ++F    NK+V++W AM+    +N      L  
Sbjct: 386 RGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKL 445

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  E + F++ TL+ +V   T +  L++GR VH    +    ++  +    ++MYAK
Sbjct: 446 FDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAK 505

Query: 121 CGDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           C  +NS+E  F  G+   D + +N+++SG   +    K L  +  M   G Q +  +  S
Sbjct: 506 CSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVS 565

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A +  G +  G  +    +K  +  +P   +   ++ + S+ G +  AE     M  
Sbjct: 566 LLSACSHSGLVEEGIALFQNMVK-DHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPF 624

Query: 240 KDVVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
                    +++G  L+   E    L   +  + S  P I   +TL ++ A +      +
Sbjct: 625 TPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSI--YITLSNIYAKASRWDSVK 682

Query: 299 SVHGY----AIRRLLGYDLLMMN 317
            V G      I+++ GY  + +N
Sbjct: 683 YVRGLMMEQEIKKIPGYSSIEVN 705


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 321/612 (52%), Gaps = 48/612 (7%)

Query: 201  IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            IK G +   +V V+ +L+ +Y + G +  A  AF  M  +DVVSWNA+I G++ NG    
Sbjct: 469  IKRGIDQ--FVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFS 526

Query: 261  AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
            A +L  +M L     P   T+V L+  C    L+ +G+S+HG+ I+  L  D  + N+L 
Sbjct: 527  ALELFVQM-LKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALT 585

Query: 321  DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
              Y+K   L  AE LF  +     +VSWN+MI              +FK M+    + S 
Sbjct: 586  SMYAKCGDLEAAEYLFEEMMD-KSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQ 644

Query: 369  STLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T+++ LPS N+ PES      IHC+ +K+G +++   V +L+ MY   G    A  L  
Sbjct: 645  VTIMS-LPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYW 697

Query: 428  RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             +   +  S    +I +  + G+    +++F  M  Q N  PDSV +++++    +    
Sbjct: 698  SLPQKNLVSL-TAIITSYAEAGNLGLVMESFSQM-HQLNMKPDSVAMLSILHGIADPVHI 755

Query: 488  FEGKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              G   HG A+KS  GLDT   V N LI+MY +  ++++   +F   +   L +WN +IS
Sbjct: 756  CIGHVFHGYAIKS--GLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVIS 813

Query: 546  AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
               Q      A+ELF  ++     P+ I+I S+LS C+QLG L+ G+++H ++     + 
Sbjct: 814  GCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEM 873

Query: 603  NSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHEMC 647
              F+ +AL+ MY+ C S                A W++MIS Y  +G   +A+  + EM 
Sbjct: 874  EDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQ 933

Query: 648  NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
              G+ P K + + +L+AC+H GL+ EG +Y+  M + YD+ P  +H  C+V +L R G  
Sbjct: 934  EQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLF 993

Query: 708  QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            +EA  FIKN+  +P   VWGA LSAC  H + K+G+ +A+ L+ L+  N G Y+ +SN+Y
Sbjct: 994  EEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLY 1053

Query: 768  VALGRWKDAVEI 779
               GRW D   +
Sbjct: 1054 AVTGRWDDVARV 1065



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 244/506 (48%), Gaps = 27/506 (5%)

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           IK G+     +    +++Y K G ++ +   F  M   D VSWN ++ G   N Y    L
Sbjct: 469 IKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSAL 528

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
             F +M   G      +L   + +   L  +  GK IH  GIK G    P   V N+L S
Sbjct: 529 ELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDP--QVKNALTS 586

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY++CGD+EAAE  F  M  K VVSWN +I  +  NG F+EA  +   M +   VE    
Sbjct: 587 MYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRM-IGAGVEVSQV 645

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T+++L S  A+        S+H Y I+  L  D  ++ SL+  Y++  S   AELL+ ++
Sbjct: 646 TIMSLPSANANP------ESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSL 699

Query: 340 APMNDLVSWNSMIS--------GL----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
            P  +LVS  ++I+        GL    F +M  L  +     +L+IL     P  +  G
Sbjct: 700 -PQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIG 758

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
              H + +K G     +  N L+ MY    ++ A F L   + H      WN VI  C Q
Sbjct: 759 HVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGM-HEKPLISWNSVISGCVQ 817

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            G    AI+ F  M +    +PD++T+ +++S C  L     G+ LH   L++ + ++  
Sbjct: 818 AGRASHAIELFCQM-KMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDF 876

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V  ALI MY +C  I  A  VF+S     L TWN MIS +S    E +AL  +  ++   
Sbjct: 877 VGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQG 936

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQ 590
            EP++I+ + +L+ACT  G++  G++
Sbjct: 937 VEPDKITFLGVLAACTHGGLIHEGRR 962



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 167/597 (27%), Positives = 280/597 (46%), Gaps = 66/597 (11%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            RG    +  ST+LL  Y  +     +   F     +DVV+WNA+I     N      L  
Sbjct: 471  RGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALEL 530

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            F +M++ G     TTL+ ++ +  Q+  + QG+ +H   IK+G+  D  + N   +MYAK
Sbjct: 531  FVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAK 590

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            CGDL ++E  F  M     VSWNT++     N + ++ +  F+ M  +G +   V++ S 
Sbjct: 591  CGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSL 650

Query: 181  VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             +A+A        + IH   IK+G  D    SV  SLI MY++ G  + AE  +W +  K
Sbjct: 651  PSANAN------PESIHCYTIKVGLADD--ASVVTSLICMYARYGSTDHAELLYWSLPQK 702

Query: 241  DVVSWNAIIDGFALNGKFE---EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            ++VS  AII  +A  G      E+F  +H++ +    +PD   +++++   AD + +  G
Sbjct: 703  NLVSLTAIITSYAEAGNLGLVMESFSQMHQLNM----KPDSVAMLSILHGIADPVHICIG 758

Query: 298  RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG- 354
               HGYAI+  L    L+ N L+  YSK N++   E LF   + M++  L+SWNS+ISG 
Sbjct: 759  HVFHGYAIKSGLDTFNLVTNGLISMYSKFNNV---EALFGLFSGMHEKPLISWNSVISGC 815

Query: 355  -----------LFKEM-LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                       LF +M ++ C+  +  T+ ++L  C+    L+FG+ +H + L+      
Sbjct: 816  VQAGRASHAIELFCQMKMHGCNPDAI-TIASLLSGCSQLGYLQFGERLHSYILRNKLEME 874

Query: 403  TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                 AL+HMY  CG +V A  + + I      + WN +I   +  G   +A+  +  M 
Sbjct: 875  DFVGTALIHMYTKCGSIVHAERVFKSIGKPC-LATWNAMISGYSCYGFEHKALTCYSEM- 932

Query: 463  QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            Q+Q   PD +T + V++AC +  L  EG+                            R  
Sbjct: 933  QEQGVEPDKITFLGVLAACTHGGLIHEGR----------------------------RYF 964

Query: 523  KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
            +  + V++       C   CM+   ++      AL   +++E EP+     + LSAC
Sbjct: 965  QIMTKVYDMVPTLQHCA--CMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSAC 1019



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 230/499 (46%), Gaps = 50/499 (10%)

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
           M+S  P++A   +  SL A++    E   +  + I+R +   + +  +L+D Y K   +S
Sbjct: 440 MKSQRPNLAPKGS-NSLDANT----EAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVS 494

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A   F+ + P+ D+VSWN++I G            LF +ML L      +TL+ +LPSC
Sbjct: 495 YAHNAFDYM-PIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSC 553

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              E +  GKSIH + +K G   +    NAL  MY  CGDL AA  L + +   S  S W
Sbjct: 554 GQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVS-W 612

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I A  QNG F EA+  FK M          VT++++ SA  N E      S+H   +
Sbjct: 613 NTMIGAYGQNGFFDEAMFVFKRMI-GAGVEVSQVTIMSLPSANANPE------SIHCYTI 665

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K  +  D  V  +LI MY R      A  ++ S    NL +   +I+++++       +E
Sbjct: 666 KVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVME 725

Query: 559 LF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            F     L  +P+ ++++SIL        +  G   HG+    G    + +++ L+ MYS
Sbjct: 726 SFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYS 785

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
                            K   +W+S+IS     G+   AIELF +M   G  P   ++ S
Sbjct: 786 KFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIAS 845

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLP 718
           LLS CS  G +  G + ++ +L     + E E  V   ++ M  + G +  A    K++ 
Sbjct: 846 LLSGCSQLGYLQFGERLHSYILRN---KLEMEDFVGTALIHMYTKCGSIVHAERVFKSIG 902

Query: 719 IQPKPGVWGAMLSACSHHG 737
            +P    W AM+S  S +G
Sbjct: 903 -KPCLATWNAMISGYSCYG 920


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 208/737 (28%), Positives = 346/737 (46%), Gaps = 40/737 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++  +     L  G+ VH    K+ M     + ++ V MY  CG L  ++  F  M   D
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SYGKVIH 197
            ++W  ++         E+ L  FR M   G    N +  + + A +   EL   G+ IH
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            +      E   YVS T  L+ MY +C  +E A + F G+  K VV WNA+I  +A    
Sbjct: 124 GVLRGTAMESDHYVSTT--LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--DLLM 315
            E+A  + + M L+  V+ +  T + ++  C+    L   + V      R   +  D   
Sbjct: 182 HEQAIQVFYAM-LLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 316 MNSLMDFYSKSNSLSKAELLFNA-----------IAPMNDLVSWNSMISGLFKEMLYLCS 364
             +L++FY     L +A   F+            I        W+  +  LFK ML    
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALE-LFKVMLLEGV 299

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +      +A+L +C+ P  LE G+ IH +  ++ F  +    NAL++MY  CG L  A  
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           + + + H  D   WN +I A  Q+    EA+     M Q      D ++ VN +  C   
Sbjct: 360 VFRSMQHR-DVISWNTIIAAHGQHSQHPEALHLLHLM-QLDGVKADKISFVNALPLCAAS 417

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           E   +G+ +H   ++S +  D  + NA++ MYG C+    AS VF +    +  +WN MI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMI 477

Query: 545 SAFS-QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           +A++ Q +    AL LF+ ++   F P+ IS V+ LSAC     L  GK +H  +   G 
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGL 537

Query: 601 QENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHE 645
           + N  +++A+L+MY+   S                 +W+ MISA+  HG   + +  F  
Sbjct: 538 ESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRR 597

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD-VRPETEHHVCIVDMLGRS 704
           M + G  P   + +S++SACSH GLV +G+Q + ++L ++  + P  EH+ C+VD++ R+
Sbjct: 598 MNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARA 657

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           GKL  A +FI   P++P   +   ML A   H D +  ++ AE L +L P+    Y+ LS
Sbjct: 658 GKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLS 717

Query: 765 NMYVALGRWKDAVEIGK 781
           N+Y  +G+  +  +I +
Sbjct: 718 NLYDEVGKKDEGAKIRR 734



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 285/620 (45%), Gaps = 27/620 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ST+LL  Y   S  E +  +F    +K VV WNAMITA  +       +  F  M+ EG
Sbjct: 137 VSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEG 196

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVH-CLSIKA-GMIADSSLCNVFVNMYAKCGDLNS 126
           ++ +  T + ++ A +++  L+  ++V  C+  +    + DSS     VN Y  CGDL  
Sbjct: 197 VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   FS  H  + +    +++        ++ L  F+ M   G + D ++  + + A + 
Sbjct: 257 AFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSG 315

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              L  G++IH    ++ ++   +V+  N+LI+MY +CG +E A   F  M  +DV+SWN
Sbjct: 316 PRGLEEGRMIHGFMREIRFD--RHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWN 373

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            II     + +  EA  LLH MQL   V+ D  + V  + LCA S  L +GR +H + + 
Sbjct: 374 TIIAAHGQHSQHPEALHLLHLMQL-DGVKADKISFVNALPLCAASEALAKGRMIHSWIVE 432

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------LFKEML 360
             +  D+++ N+++D Y    S   A  +F A+    D VSWN+MI+       L  E L
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKA-RDQVSWNAMITAYAAQPRLSSEAL 491

Query: 361 YLCSQFSFSTLLAILPS-------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L  Q      +  + S       C +  SL  GK +H    + G  +N    NA+++MY
Sbjct: 492 LLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMY 551

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G LV A  +  ++    D   WN +I A  Q+GH  + ++ F+ M  +    P+ VT
Sbjct: 552 AKSGSLVLARKMFGKMP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKL-PNDVT 609

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            V+V+SAC +  L  +G  L    L     +  R ++   ++ +  R   + +A     +
Sbjct: 610 FVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAA 669

Query: 532 C-YNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILSAC-TQLGVLRHG 588
                +    + M+ A   +K   RA +   HL E  P+  +   +LS    ++G    G
Sbjct: 670 APLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEG 729

Query: 589 KQIHGHVFHLGFQENSFISS 608
            +I   ++    ++    SS
Sbjct: 730 AKIRRLMYEKNIRKEPAFSS 749



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 4/296 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  H+    +L+  Y      E ++ +F    ++DV++WN +I A  ++      LH   
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M  +G++ D  + +  +        L +GR++H   +++G+ AD  L N  ++MY  C 
Sbjct: 394 LMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +   F  M   D VSWN +++          + LL F++M   G   D +S  +A+
Sbjct: 454 STDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A    L+ GK++H    + G E +  ++V N++++MY++ G +  A + F  M   D
Sbjct: 514 SACAAQASLAEGKLLHDRIRETGLESN--MTVANAVLNMYAKSGSLVLARKMFGKMPLPD 571

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN +I  FA +G  ++       M     + P+  T V+++S C+   L+++G
Sbjct: 572 VISWNGMISAFAQHGHADQVLRFFRRMNHEGKL-PNDVTFVSVVSACSHGGLVKDG 626



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 25/318 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           G  A +    ++L  Y +    + +  +F     +D V+WNAMITA   + R     L  
Sbjct: 434 GIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLL 493

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   G   D  + +  +SA      L +G+++H    + G+ ++ ++ N  +NMYAK
Sbjct: 494 FQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAK 553

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F  M   D +SWN ++S    + + ++ L +FR M   G+  ++V+  S 
Sbjct: 554 SGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSV 613

Query: 181 VAASACLGELSYGKVIHALGIKLGY---EDSPYVSVTNS----LISMYSQCGDIEAAERA 233
           V  SAC    S+G ++   G++L      D P +S        ++ + ++ G ++AAE+ 
Sbjct: 614 V--SAC----SHGGLVKD-GVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKF 666

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADS 291
                 K D V  + ++    ++   E A     H M+L     PD +    ++S   D 
Sbjct: 667 IAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT----PDRSAAYVVLSNLYDE 722

Query: 292 LLLREGRSVHGYAIRRLL 309
           +    G+   G  IRRL+
Sbjct: 723 V----GKKDEGAKIRRLM 736


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 187/599 (31%), Positives = 312/599 (52%), Gaps = 39/599 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+++SM  + G+   A R F  M  +DV SWN ++ G+   G  EEA DL H M +   V
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRM-MWAGV 191

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD+ T   ++  C      R GR VH + +R     ++ ++N+LM  Y+K   +  A  
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARK 251

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+++A M D +SWN+MI+G            LF  ML    Q +  T+ ++  +     
Sbjct: 252 VFDSMAVM-DCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            + F K +H   +K GF+ +    N+L+ MY + G +  A ++  R+    D   W  +I
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMD-TRDAMSWTAMI 369

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALK 499
               +NG   +A++ + ++ +  N SPD +T+ + ++AC   G+L++   G  LH LA  
Sbjct: 370 SGYEKNGFPDKALEVY-ALMEVNNVSPDDITIASALAACACLGSLDV---GVKLHELAES 425

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                   V NAL+ MY + + I  A  VF+     ++ +W+ MI+ F  N     AL  
Sbjct: 426 KGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYY 485

Query: 560 FRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           FRH+  + +PN ++ ++ L+AC   G LR GK+IH HV   G     ++ +AL+D+Y  C
Sbjct: 486 FRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKC 545

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K   +W+ MI+ +  HG G  A+  F++M   G  P + + ++LL
Sbjct: 546 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALL 605

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            ACS  G+V EG + +++M ++Y + P  +H+ C+VD+L R G+L EAY FI  +PI P 
Sbjct: 606 CACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPD 665

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             VWGA+L+ C  H   ++G+  A+ + +LEP + GY++ L ++Y   G W     + K
Sbjct: 666 AAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRK 724



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 24/557 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    +   +   L  +  M+  G+R D  T   ++ +   +  
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 210

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR VH   ++ G   +  + N  + MYAKCGD+ ++   F  M   D +SWN +++G
Sbjct: 211 WRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAG 270

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N      L  F  M     Q + ++++S   AS  L ++++ K +H L +K G+   
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATD 330

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MY+  G +  A   F  M  +D +SW A+I G+  NG  ++A ++   M
Sbjct: 331 --VAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALM 388

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           ++  +V PD  T+ + ++ CA    L  G  +H  A  +     +++ N+L++ Y+KS  
Sbjct: 389 EV-NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKR 447

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
           + KA  +F  + P  D+VSW+SMI+G             F+ ML      S  T +A L 
Sbjct: 448 IDKAIEVFKCM-PEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSV-TFIAALA 505

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DT 435
           +C +  +L  GK IH   L+ G +      NAL+ +Y+ CG     ++  Q  +H + D 
Sbjct: 506 ACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQ--TGYAWAQFCAHGAKDV 563

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-H 494
             WNI+I     +G+ + A+  F  M  +    PD VT V ++ AC    +  EG  L H
Sbjct: 564 VSWNIMIAGFVAHGNGETALSFFNQMV-KIGECPDEVTFVALLCACSRGGMVSEGWELFH 622

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCYNCNLCTWNCMISAFSQNK-A 552
            +  K  +  + +    ++ +  R   +  A + + E     +   W  +++    ++  
Sbjct: 623 SMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHV 682

Query: 553 EVRALELFRHLEFEPNE 569
           E+  L     LE EPN+
Sbjct: 683 ELGELAAKYVLELEPND 699



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 220/464 (47%), Gaps = 18/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T Y+      ++  +F      D ++WNAMI    EN     GL  F
Sbjct: 225 GFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELF 284

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+++ ++ +  T+  +  A   ++ +   + +H L++K G   D + CN  + MYA  
Sbjct: 285 LTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASL 344

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS M   D +SW  ++SG   N +P+K L  +  M  +    D+++++SA+
Sbjct: 345 GMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASAL 404

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA ACLG L  G  +H L    G+    YV VTN+L+ MY++   I+ A   F  M  KD
Sbjct: 405 AACACLGSLDVGVKLHELAESKGF--MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKD 462

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+++I GF  N +  EA  L +   ++  V+P+  T +  ++ CA +  LR G+ +H
Sbjct: 463 VVSWSSMIAGFCFNHRNFEA--LYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIH 520

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +R  + Y+  + N+L+D Y K      A   F A     D+VSWN MI+G       
Sbjct: 521 AHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGA-KDVVSWNIMIAGFVAHGNG 579

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
                 F +M+ +       T +A+L +C+    +  G  + H    K     N      
Sbjct: 580 ETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYAC 639

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G L  A++ +  +    D + W  ++  C  + H +
Sbjct: 640 MVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVE 683



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 280/615 (45%), Gaps = 50/615 (8%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G+   +   F+ M   D  SWN ++ G       E+ L  +  M W+G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +    + +   + +   G+ +HA  ++ G+ +   V V N+L++MY++CGD+ A
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEE--VDVLNALMTMYAKCGDVVA 248

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV--VTLIS- 286
           A + F  M   D +SWNA+I G   NG+     +L   M L   V+P++ T+  VT+ S 
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTM-LQDEVQPNLMTITSVTVASG 307

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           L +D    +E   +HG A++R    D+   NSL+  Y+    + +A  +F+ +    D +
Sbjct: 308 LLSDITFAKE---MHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRM-DTRDAM 363

Query: 347 SWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQ 394
           SW +MISG  K        E+  L    + S    T+ + L +C    SL+ G  +H   
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
              GF +  +  NAL+ MY     +  A  + + +    D   W+ +I     N    EA
Sbjct: 424 ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMP-EKDVVSWSSMIAGFCFNHRNFEA 482

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           +  F+ M    +  P+SVT +  ++AC        GK +H   L+  +  +  + NALI 
Sbjct: 483 LYYFRHML--ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALID 540

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           +Y +C     A   F +    ++ +WN MI+ F  +     AL  F  +      P+E++
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVT 600

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG 631
            V++L AC++ G++  G ++    FH           ++ D YS   +   ++ M+    
Sbjct: 601 FVALLCACSRGGMVSEGWEL----FH-----------SMTDKYSIVPNLKHYACMVDLLS 645

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-E 690
             G+  EA    +EM    I P  +   +LL+ C     V+ G      +LE   + P +
Sbjct: 646 RVGQLTEAYNFINEM---PITPDAAVWGALLNGCRIHRHVELGELAAKYVLE---LEPND 699

Query: 691 TEHHVCIVDMLGRSG 705
             +HV + D+   +G
Sbjct: 700 AGYHVLLCDLYADAG 714



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 165/355 (46%), Gaps = 5/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  Y+++     +  +F     +D ++W AMI+   +N      L  
Sbjct: 325 RGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEV 384

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G ++   + N  + MYAK
Sbjct: 385 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAK 444

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   F  M   D VSW+++++G   N+   + L YFR M  +  + ++V+  +A
Sbjct: 445 SKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAA 503

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A  G L  GK IHA  ++ G     Y+   N+LI +Y +CG    A   F     K
Sbjct: 504 LAACAATGALRSGKEIHAHVLRCGIAYEGYLP--NALIDLYVKCGQTGYAWAQFCAHGAK 561

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN +I GF  +G  E A    ++M  +    PD  T V L+  C+   ++ EG  +
Sbjct: 562 DVVSWNIMIAGFVAHGNGETALSFFNQMVKIGEC-PDEVTFVALLCACSRGGMVSEGWEL 620

Query: 301 -HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            H    +  +  +L     ++D  S+   L++A    N +    D   W ++++G
Sbjct: 621 FHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG 675



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 21/185 (11%)

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF- 565
           R+ NA+++M  R  +   A  VF      ++ +WN M+  + +      AL+L+  + + 
Sbjct: 130 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWA 189

Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA- 622
              P+  +   +L +C  +   R G+++H HV   GF E   + +AL+ MY+ C    A 
Sbjct: 190 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAA 249

Query: 623 --------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                         W++MI+ +  +G+    +ELF  M    ++P   ++ S+  A   S
Sbjct: 250 RKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA---S 306

Query: 669 GLVDE 673
           GL+ +
Sbjct: 307 GLLSD 311


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 236/825 (28%), Positives = 386/825 (46%), Gaps = 56/825 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L  S  L+  Y+  S   ++  +F     ++ V+W  +++  V +         
Sbjct: 85  RGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRV 144

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQ-----MNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           F  M+ EG  F   T     S L        + L     VH L  K    +++++CN  +
Sbjct: 145 FKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALI 204

Query: 116 NMYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGE 170
           +MY  C  G    ++  F      D ++WN +MS      Y       F  M     + E
Sbjct: 205 SMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIE 264

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
              N     ++  +  L   S G +       L    S  + V ++L+S +++ G ++ A
Sbjct: 265 LRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEA 324

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
           +  F  +  ++ V+ N +I G       EEA  +   M    S   +  T V L+S  A+
Sbjct: 325 KDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF--MGTRDSFVVNTDTFVVLLSAVAE 382

Query: 291 SLL----LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
             +    L  GR VHG+ +R  L+   + + N L++ Y+K  ++ KA  +F  +    D 
Sbjct: 383 FSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCA-RDR 441

Query: 346 VSWNSMISGLFKE------MLYLCSQ----FSFSTLLAI--LPSCNSPESLEFGKSIHCW 393
           VSWN++IS L +       M+  C       S S   AI  L SC S   L  G+ +HC 
Sbjct: 442 VSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCD 501

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN-IVIVACTQNGHFQ 452
            +K G   +T   NAL+ MY +CG    ++ +   ++ + D   WN I+ V  + +    
Sbjct: 502 AVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEH-DIVSWNSIMGVMVSSHAPTA 560

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           E+++ F +M  +   +P+ VT VN++SA   L +   GK +H + LK     D  V NAL
Sbjct: 561 ESVEVFSNM-MRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNAL 619

Query: 513 ITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRALE---LFRHLEFEPN 568
           ++ Y +  D+ S   +F S     +  +WN MIS +  N      ++   L  H     +
Sbjct: 620 MSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLD 679

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +   +L+AC  +  L  G ++H        + +  + SALLDMYS C           
Sbjct: 680 CCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFN 739

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               K+  +W+SMIS Y  HG G +A+E+F EM  +G  P   + +S+LSACSH+GLVD 
Sbjct: 740 SMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDR 799

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           GL Y+  M+E++ + P  EH+ C++D+LGR+GKL +  E+I  +P++P   +W  +L AC
Sbjct: 800 GLDYF-EMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVAC 858

Query: 734 SHHGD---TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
               D     +GK+ + +L +LEP+N   Y+  SN Y A GRW+D
Sbjct: 859 RQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWED 903



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 186/730 (25%), Positives = 339/730 (46%), Gaps = 78/730 (10%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K G+  D  L N  VN+YAK   L ++   F GM   + VSW  ++SG + +  
Sbjct: 78  LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137

Query: 155 PEKCLLYFREMGWSGEQ---ADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSP 209
            ++    F+ M W G +       +  S + A    G   L++   +H L  K  Y  + 
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN- 196

Query: 210 YVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL--- 264
             +V N+LISMY  C  G    A++ F     +D+++WNA++  +A  G     F L   
Sbjct: 197 -TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255

Query: 265 -LHEMQL--MRSVEPDIATVVTLISL--CADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
            LH+     +R  E    +++T  SL  C+  +L      V    ++     DL + ++L
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATSLSSCSSGVL----DQVFARVLKSGSSSDLYVGSAL 311

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML--------------YLCSQ 365
           +  +++   L +A+ +F  +   N  V+ N +I GL K+                ++ + 
Sbjct: 312 VSAFARHGMLDEAKDIFINLKERN-AVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNT 370

Query: 366 FSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAF 423
            +F  LL+ +   + PE  L  G+ +H   L+ G  +  I + N L++MY  CG +  A 
Sbjct: 371 DTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKA- 429

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           S + R+    D   WN +I    QNG  + A+  +  M +Q   SP +   ++ +S+C +
Sbjct: 430 SRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNY-CMMRQGCISPSNFAAISGLSSCAS 488

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L L   G+ +H  A+K  + LDT V NAL+ MYG C     +  +F S    ++ +WN +
Sbjct: 489 LRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSI 548

Query: 544 ISAF-SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +    S +     ++E+F ++      PN+++ V++LSA + L VL  GKQ+H  V   G
Sbjct: 549 MGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHG 608

Query: 600 FQENSFISSALLDMY----------------SNCKSNAAWSSMISAYGYHGKGWEAIELF 643
             E++ + +AL+  Y                S  +   +W+SMIS Y Y+G   E ++  
Sbjct: 609 AIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCV 668

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VD 699
             M +S       +   +L+AC+    ++ G++     +  + +R + E  V +    +D
Sbjct: 669 WLMMHSNQMLDCCTFSIVLNACASVAALERGME-----MHAFGIRSQLESDVVVESALLD 723

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-----P 754
           M  + G++  A +   ++  Q     W +M+S  + HG   +G++  E+  +++     P
Sbjct: 724 MYSKCGRIDYASKVFNSMS-QKNEFSWNSMISGYARHG---LGEKALEIFEEMQRNGACP 779

Query: 755 ENVGYYISLS 764
           ++V +   LS
Sbjct: 780 DHVTFVSVLS 789


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 185/599 (30%), Positives = 315/599 (52%), Gaps = 39/599 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+++SM  + G+   A R F  M  +DV SWN ++ G+  +G  +EA DL H M +   V
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRM-MWAGV 185

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD+ T   ++  C      R GR VH + +R   G ++ ++N+LM  Y+K   +  A  
Sbjct: 186 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARK 245

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+++  M D +SWN+MI+G            LF  ML+   Q +  T+ ++  +     
Sbjct: 246 VFDSMTVM-DCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            + F K +H   +K GF+ +    N+L+ MY + G +  A ++  R+    D   W  +I
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMD-TRDAMTWTAMI 363

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALK 499
               +NG   +A++ + ++ +  N SPD +T+ + ++AC   G+L++   G  LH LA  
Sbjct: 364 SGYEKNGFPDKALEVY-ALMEVNNVSPDDITIASALAACACLGSLDV---GVKLHELAES 419

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                   V NA++ MY + + I  A  VF+  +  ++ +W+ MI+ F  N     AL  
Sbjct: 420 KGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYY 479

Query: 560 FRHL--EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           FRH+  + +PN ++ ++ L+AC   G LR GK+IH HV   G +   ++ +AL+D+Y  C
Sbjct: 480 FRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKC 539

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K   +W+ MI+ +  HG G  A+  F++M   G  P + + ++LL
Sbjct: 540 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALL 599

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            ACS  G+V EG + +++M E+Y + P  +H+ C+VD+L R+G+L EAY FI  +PI P 
Sbjct: 600 CACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPD 659

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             VWGA+L+ C  H   ++G+  A+ +  LEP + GY++ L ++Y     W     + K
Sbjct: 660 AAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRK 718



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 256/560 (45%), Gaps = 30/560 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   +DV +WN M+    ++  +   L  +  M+  G+R D  T   ++ +   +  
Sbjct: 145 VFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 204

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR VH   ++ G   +  + N  + MYAKCGD+ ++   F  M   D +SWN +++G
Sbjct: 205 WRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N      L  F  M     Q + ++++S   AS  L ++++ K +H L +K G+   
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGD 324

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V+  NSLI MY+  G +  A   F  M  +D ++W A+I G+  NG  ++A ++   M
Sbjct: 325 --VAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALM 382

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           ++  +V PD  T+ + ++ CA    L  G  +H  A  +     +++ N++++ Y+KS  
Sbjct: 383 EV-NNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKR 441

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF-- 386
           + KA  +F  +    D+VSW+SMI+G         + + F  +LA +     P S+ F  
Sbjct: 442 IDKAIEVFKCMHE-KDVVSWSSMIAGFCFNHRNFEALYYFRHMLADV----KPNSVTFIA 496

Query: 387 -------------GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
                        GK IH   L+ G        NAL+ +Y+ CG     ++  Q  +H +
Sbjct: 497 ALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQ--TGYAWAQFCAHGA 554

Query: 434 -DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WNI+I     +GH   A+  F  M  +    PD VT V ++ AC    +  EG  
Sbjct: 555 KDVVSWNIMIAGFVAHGHGDTALSFFNQMV-KIGECPDEVTFVALLCACSRGGMVSEGWE 613

Query: 493 L-HGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCYNCNLCTWNCMISAFSQN 550
           L H +  K  +  + +    ++ +  R   +  A + + E     +   W  +++    +
Sbjct: 614 LFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIH 673

Query: 551 K-AEVRALELFRHLEFEPNE 569
           +  E+  L     L  EPN+
Sbjct: 674 RHVELGELAAKYVLALEPND 693



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 148/574 (25%), Positives = 265/574 (46%), Gaps = 46/574 (8%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  ++M  + G+   +   F+ M   D  SWN ++ G   +   ++ L  +  M W+G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + D  +    + +   + +   G+ +HA  ++ G+ +   V V N+L++MY++CGD+ A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEE--VDVLNALMTMYAKCGDVMA 242

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV--VTLIS- 286
           A + F  MT  D +SWNA+I G   NG+     +L   M L   V+P++ T+  VT+ S 
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTM-LHDEVQPNLMTITSVTVASG 301

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           L +D    +E   +HG A++R    D+   NSL+  Y+    + +A  +F+ +    D +
Sbjct: 302 LLSDVTFAKE---MHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRM-DTRDAM 357

Query: 347 SWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQ 394
           +W +MISG  K        E+  L    + S    T+ + L +C    SL+ G  +H   
Sbjct: 358 TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 417

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
              GF +  +  NA++ MY     +  A  +  +  H  D   W+ +I     N    EA
Sbjct: 418 ESKGFISYIVVTNAILEMYAKSKRIDKAIEVF-KCMHEKDVVSWSSMIAGFCFNHRNFEA 476

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           +  F+ M    +  P+SVT +  ++AC        GK +H   L+  +  +  + NALI 
Sbjct: 477 LYYFRHML--ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALID 534

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           +Y +C     A   F +    ++ +WN MI+ F  +     AL  F  +      P+E++
Sbjct: 535 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVT 594

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG 631
            V++L AC++ G++  G ++    FH           ++ + YS   +   ++ M+    
Sbjct: 595 FVALLCACSRGGMVSEGWEL----FH-----------SMTEKYSIVPNLKHYACMVDLLS 639

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
             G+  EA    +EM    I P  +   +LL+ C
Sbjct: 640 RAGQLTEAYNFINEM---PITPDAAVWGALLNGC 670



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 219/464 (47%), Gaps = 18/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T Y+      ++  +F      D ++WNAMI    EN     GL  F
Sbjct: 219 GFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELF 278

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ + ++ +  T+  +  A   ++ +   + +H L++K G   D + CN  + MYA  
Sbjct: 279 LTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASL 338

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   FS M   D ++W  ++SG   N +P+K L  +  M  +    D+++++SA+
Sbjct: 339 GMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASAL 398

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA ACLG L  G  +H L    G+    Y+ VTN+++ MY++   I+ A   F  M  KD
Sbjct: 399 AACACLGSLDVGVKLHELAESKGF--ISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKD 456

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+++I GF  N +  EA  L +   ++  V+P+  T +  ++ CA +  LR G+ +H
Sbjct: 457 VVSWSSMIAGFCFNHRNFEA--LYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIH 514

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + +R  + Y+  + N+L+D Y K      A   F A     D+VSWN MI+G       
Sbjct: 515 AHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGA-KDVVSWNIMIAGFVAHGHG 573

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNA 408
                 F +M+ +       T +A+L +C+    +  G  + H    K     N      
Sbjct: 574 DTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYAC 633

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           ++ +    G L  A++ +  +    D + W  ++  C  + H +
Sbjct: 634 MVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVE 677



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 176/378 (46%), Gaps = 5/378 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +    SL+  Y+++     +  +F     +D +TW AMI+   +N      L  
Sbjct: 319 RGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEV 378

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M    +  D  T+   ++A   +  L  G  +H L+   G I+   + N  + MYAK
Sbjct: 379 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAK 438

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              ++ +   F  MH  D VSW+++++G   N+   + L YFR M  +  + ++V+  +A
Sbjct: 439 SKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAA 497

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA A  G L  GK IHA  ++ G E   Y+   N+LI +Y +CG    A   F     K
Sbjct: 498 LAACAATGALRSGKEIHAHVLRCGIEYEGYLP--NALIDLYVKCGQTGYAWAQFCAHGAK 555

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSWN +I GF  +G  + A    ++M  +    PD  T V L+  C+   ++ EG  +
Sbjct: 556 DVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGEC-PDEVTFVALLCACSRGGMVSEGWEL 614

Query: 301 -HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
            H    +  +  +L     ++D  S++  L++A    N +    D   W ++++G     
Sbjct: 615 FHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHR 674

Query: 360 LYLCSQFSFSTLLAILPS 377
                + +   +LA+ P+
Sbjct: 675 HVELGELAAKYVLALEPN 692



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 21/185 (11%)

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF- 565
           R+ NA+++M  R  +   A  VF      ++ +WN M+  + ++     AL+L+  + + 
Sbjct: 124 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWA 183

Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA- 622
              P+  +   +L +C  +   R G+++H HV   GF E   + +AL+ MY+ C    A 
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243

Query: 623 --------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                         W++MI+ +  +G+    +ELF  M +  ++P   ++ S+  A   S
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA---S 300

Query: 669 GLVDE 673
           GL+ +
Sbjct: 301 GLLSD 305


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 215/734 (29%), Positives = 372/734 (50%), Gaps = 48/734 (6%)

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           RF  T L ++  +    N LK+G  +H   IK G+  D  L N  +++YAK   ++ +  
Sbjct: 13  RFQETCLRVL--SFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARH 70

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D VSW TI+S      +    L  F  M  SGE  +  +LSSA+ +   LGE
Sbjct: 71  LFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGE 130

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG--DIEAAERAFWGMTCKDVVSWNA 247
              G  IH   +KLG E + +V    SL+  Y++CG   +EA +         DVVSW  
Sbjct: 131 FERGMQIHCSAVKLGLEMNRFVGT--SLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTT 188

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++     NGK+ EAF++  +M +   V P+  T V L+   +  L L  G+ +H + I  
Sbjct: 189 MLSSLVENGKWGEAFEIYVKM-IESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMF 247

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               +L++  +++D YSK   +  A  + N + P  D+  W ++ISG            +
Sbjct: 248 GAELNLVLKTAVVDMYSKCRRMVDAIKVSN-LTPEYDVYLWTTLISGFTQNLQVREAISV 306

Query: 356 FKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F++M     L + F++S+LL    + +S  SL+ G+  H   + +G  ++    NAL+ M
Sbjct: 307 FRDMELSGLLPNNFTYSSLLN---ASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDM 363

Query: 413 YINCGDLVA-AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y+ C  +   A  + + I+ + +  CW  +I    +    +++ + F  M Q     P+S
Sbjct: 364 YMKCSHITTNAVKVFREIT-SPNVMCWTSLIAGFAEK-RLEDSFQLFAEM-QAAGVRPNS 420

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T+  ++ AC           LHG  +K+ + +D  V NAL+  Y     I  A +V  +
Sbjct: 421 FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT 480

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               +  T+ C+ +  +Q      AL++  H+     + +E S+ S LSA   LG +  G
Sbjct: 481 MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG 540

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKS----NAA-----------WSSMISAYGYH 633
           KQ+H +    GFQ    +S++L+ +YS C S    N A           W+ +IS + ++
Sbjct: 541 KQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWN 600

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G    A+  F +M  +G++P   +++SL+SACSH GL++ GL+Y+++M +EY + P+ +H
Sbjct: 601 GLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDH 660

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           ++C+VD+LGR G+L+EA   I+ +  +P   +   +L+AC+ HG+  +G+ +A    +L+
Sbjct: 661 YMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELD 720

Query: 754 PENVGYYISLSNMY 767
           P +   Y+ L+N+Y
Sbjct: 721 PSDPAIYLLLANLY 734



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 304/699 (43%), Gaps = 41/699 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  + +LL+ Y+       +  LF E  N+DVV+W  ++++  + +     L  F
Sbjct: 44  GLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLF 103

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G   +  TL   + +   +   ++G  +HC ++K G+  +  +    V  Y KC
Sbjct: 104 DMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKC 163

Query: 122 GDLNSSECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           G  +        +     D VSW T++S  + N    +    + +M  SG   +  +   
Sbjct: 164 GCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVK 223

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A +    LSYGK++HA  I  G E +  + +  +++ MYS+C  +  A +       
Sbjct: 224 LLGAVSSFLGLSYGKLLHAHLIMFGAELN--LVLKTAVVDMYSKCRRMVDAIKVSNLTPE 281

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            DV  W  +I GF  N +  EA  +  +M+L   + P+  T  +L++  +  L L  G  
Sbjct: 282 YDVYLWTTLISGFTQNLQVREAISVFRDMEL-SGLLPNNFTYSSLLNASSSILSLDLGEQ 340

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            H   I   L  DL + N+L+D Y K S+  + A  +F  I   N ++ W S+I+G    
Sbjct: 341 FHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPN-VMCWTSLIAGFAEK 399

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF EM     + +  T+ AIL +C+   SL     +H   +K     +    N
Sbjct: 400 RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVAN 459

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y   G +  A+S++  ++   D+  +  +     Q GH   A+K    M      
Sbjct: 460 ALVDTYAGVGMIDEAWSVIGTMNLR-DSITYTCLAARLNQKGHHGMALKVLIHMC-NDGI 517

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D  +L + +SA   L     GK LH  ++KS       V N+L+ +Y +C  I  A+ 
Sbjct: 518 KMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANR 577

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGV 584
            F+     +  +WN +IS FS N     AL  F  +     +P+ I+++S++SAC+  G+
Sbjct: 578 AFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGL 637

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           L  G +     FH   Q+   I+   LD Y           ++   G  G+  EA+ +  
Sbjct: 638 LELGLE----YFH-SMQKEYHITPK-LDHY---------MCLVDLLGRGGRLEEAMGVIE 682

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +M     +P      +LL+AC+  G V  G       LE
Sbjct: 683 KM---SFKPDSLICKTLLNACNLHGNVALGEDMARRCLE 718



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 11/305 (3%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +  + +L+  Y+ V   + + ++      +D +T+  +     +     M L     M  
Sbjct: 455 IAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCN 514

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +GI+ D  +L   +SA   +  ++ G+ +HC S+K+G     S+ N  V++Y+KCG ++ 
Sbjct: 515 DGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHD 574

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D  SWN ++SG   N      L  F +M  +G + D+++L S ++A + 
Sbjct: 575 ANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSH 634

Query: 187 LGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVS 244
            G L  G +  H++  +  Y  +P +     L+ +  + G +E A      M+ K D + 
Sbjct: 635 GGLLELGLEYFHSM--QKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLI 692

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
              +++   L+G      D+      +   +P I  ++        +L    G S  G  
Sbjct: 693 CKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLA-------NLYDNAGLSDFGEK 745

Query: 305 IRRLL 309
            RRL+
Sbjct: 746 TRRLM 750


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 195/636 (30%), Positives = 323/636 (50%), Gaps = 37/636 (5%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D   L   + AS     L  GKV+H   + LG ++  YV    +LIS+Y  C   + A+ 
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYV--CKNLISLYVSCNLFDYAKN 59

Query: 233 AFWGMTCKDVVSW-NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            F  +     +S  N ++ G+  N  ++EA  L  ++     ++PD  T  +++  C   
Sbjct: 60  VFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGL 119

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             +  G+ +H   ++  L  D+++ +SL+  Y+K N    A  LF+ + P  D+  WN++
Sbjct: 120 RRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEM-PDKDVACWNTV 178

Query: 352 IS-----GLFKEMLY---LCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           IS     G F+E L    +  +F F     T+   + SC     L+ G+ IH   +  GF
Sbjct: 179 ISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGF 238

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             ++    AL+ MY  CG L  A  + +++  N     WN +I      G     I+ FK
Sbjct: 239 RMDSFVSAALVDMYGKCGQLEMAIEVFEQMP-NKTVVAWNSMINGYGFKGDGISCIQLFK 297

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M   +   P   TL + + AC       EGK +HG  +++ +  D  + ++L+ +Y +C
Sbjct: 298 RM-YSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKC 356

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
             ++SA T+F+        +WN MIS +        AL LF  +     EP+ I+  S+L
Sbjct: 357 GKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVL 416

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           +AC+QL  L  G++IH  +       N  +  ALLDMY+ C               +   
Sbjct: 417 AACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLV 476

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W+SMI+AYG HG+ +EA+ELF EM  S ++P + + +++LSACSH+GLVD+GL ++N M
Sbjct: 477 SWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQM 536

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTK 740
           +  Y + P  EH+ C++ +LGR+G+L EAYE +++ P I     +   + SAC  H +  
Sbjct: 537 INVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLD 596

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +G ++AE L   +P++   YI LSNMY + G+W + 
Sbjct: 597 LGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEV 632



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 180/676 (26%), Positives = 321/676 (47%), Gaps = 51/676 (7%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  L+ ++ A      LKQG+V+H   +  G+  D  +C   +++Y  C   + ++  F
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 132 SGMHCADTVSW-NTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             +     +S  N +M+G   N  Y E   L+ + M +   + D+ +  S + A   L  
Sbjct: 62  DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  G++IH   +K G      + V +SL+ MY++C + E A + F  M  KDV  WN +I
Sbjct: 122 VVLGQMIHTCLVKEGLMVD--IVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
             +  +GKFEEA   L    +MR    EPD  T+ T IS CA  L L  GR +H   +  
Sbjct: 180 SCYYQSGKFEEA---LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS 236

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D  +  +L+D Y K   L  A  +F  + P   +V+WNSMI+G            L
Sbjct: 237 GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQM-PNKTVVAWNSMINGYGFKGDGISCIQL 295

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           FK M     + + +TL + L +C+    L  GK +H + ++     +    ++LM +Y  
Sbjct: 296 FKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFK 355

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG + +A ++ + +   +  S WN++I      G   +A++ F  M+ +    PD++T  
Sbjct: 356 CGKVESAETIFKLMPKTTTVS-WNVMISGYVTEGKLFDALRLFGEMS-KSFVEPDAITFT 413

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +V++AC  L    +G+ +H L ++  +G +  V  AL+ MY +C  ++ A  VF+     
Sbjct: 414 SVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPER 473

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +W  MI+A+  +     ALELF  +     +P+ ++ ++ILSAC+  G++  G    
Sbjct: 474 DLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDG---- 529

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
             ++H          + ++++Y        +S +I+  G  G+  EA E+     N  I 
Sbjct: 530 --LYHF---------NQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQS--NPEIS 576

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAY 711
                + +L SAC     +D G++   N++   D  P ++  ++ + +M    GK  E  
Sbjct: 577 DDFQLLSTLFSACRLHKNLDLGVEIAENLI---DKDPDDSSTYIILSNMYASFGKWDEVR 633

Query: 712 EF---IKNLPIQPKPG 724
                +K+L ++  PG
Sbjct: 634 MVRSKMKDLGLKKNPG 649



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 237/477 (49%), Gaps = 21/477 (4%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ DS T   ++ A   +  +  G+++H   +K G++ D  + +  V MYAKC +   + 
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D   WNT++S    +   E+ L YF  M   G + D+V++++A+++ A L 
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ IH   +  G+    +VS   +L+ MY +CG +E A   F  M  K VV+WN++
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSA--ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSM 279

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I+G+   G       L   M     V+P + T+ + +  C+ S  L EG+ VHGY IR  
Sbjct: 280 INGYGFKGDGISCIQLFKRM-YSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR 338

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +  D+ + +SLMD Y K   +  AE +F  + P    VSWN MISG            LF
Sbjct: 339 IQPDIFLNSSLMDLYFKCGKVESAETIFK-LMPKTTTVSWNVMISGYVTEGKLFDALRLF 397

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM     +    T  ++L +C+   +LE G+ IH   ++    NN + + AL+ MY  C
Sbjct: 398 GEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKC 457

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  AF + + +    D   W  +I A   +G   EA++ F  M  Q N  PD VT + 
Sbjct: 458 GAVEEAFGVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEML-QSNVKPDRVTFLA 515

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
           ++SAC +  L  +G   H   + ++ G+  R+++   LIT+ GR   +  A  + +S
Sbjct: 516 ILSACSHAGLVDDG-LYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQS 571



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 231/504 (45%), Gaps = 53/504 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            G +  +   +SL+  Y+  + FE ++ LF E  +KDV  WN +I+   ++      L +
Sbjct: 135 EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRY 194

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           FG M   G   DS T+   +S+  ++  L +GR +H   + +G   DS +    V+MY K
Sbjct: 195 FGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGK 254

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  M     V+WN++++G         C+  F+ M   G +    +L+S 
Sbjct: 255 CGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTST 314

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +   +L  GK +H   I+   +  P + + +SL+ +Y +CG +E+AE  F  M   
Sbjct: 315 LMACSQSAQLLEGKFVHGYIIRNRIQ--PDIFLNSSLMDLYFKCGKVESAETIFKLMPKT 372

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSWN +I G+   GK  +A  L  EM     VEPD  T  ++++ C+    L +GR +
Sbjct: 373 TTVSWNVMISGYVTEGKLFDALRLFGEMS-KSFVEPDAITFTSVLAACSQLAALEKGREI 431

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   + R LG + ++M +L+D Y+K  ++ +A  +F  + P  DLVSW SMI+       
Sbjct: 432 HNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCL-PERDLVSWTSMITAYGSHGR 490

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF EML    +    T LAIL +C                     S+  +  + 
Sbjct: 491 VYEALELFAEMLQSNVKPDRVTFLAILSAC---------------------SHAGLVDDG 529

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L H       ++  + ++ RI H      ++ +I    + G   EA +  +S       S
Sbjct: 530 LYHF----NQMINVYGIIPRIEH------YSCLITLLGRAGRLHEAYEILQS---NPEIS 576

Query: 469 PDSVTLVNVISAC---GNLELAFE 489
            D   L  + SAC    NL+L  E
Sbjct: 577 DDFQLLSTLFSACRLHKNLDLGVE 600


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 194/619 (31%), Positives = 316/619 (51%), Gaps = 41/619 (6%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           + H  G+ LG      +     L+S Y+  GD+ +A   F G    D  S+  ++     
Sbjct: 53  LTHTQGLLLGS-----LRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQ 107

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL--CADSLLLREGRSVHGYAIRRLLGYD 312
             +  EA  L  +M+  R         V  ++L  C  S     G  +H  A++ + G D
Sbjct: 108 AERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVK-VGGAD 166

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             +MNSL+D Y+K+  L  A  +F  I P  ++VSW SM+SG            LF +M 
Sbjct: 167 GFVMNSLVDMYAKAGDLECARKVFERI-PGRNVVSWTSMLSGCVQNGFAADGLLLFNKMR 225

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 S  T+  ++ +C++   L  G+ +H   +K G  +N+    AL+ MY+ CG+L 
Sbjct: 226 QDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELE 285

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +S+  D   W  +IV  TQNG+  +A++ F    +  N  P+SVT+  V+SA
Sbjct: 286 DAQCVFDELSY-IDLVLWTTMIVGYTQNGNPLDALRLFLD-KKFANIVPNSVTIATVLSA 343

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
              L     G+S+HG+A+K  +   T V NAL+ MY +C+ +  A+ +F S  N ++  W
Sbjct: 344 SAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAW 403

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N M+S +++N     AL LF+ +  +   P+ IS+V  LSA   LG L  GK  HG+   
Sbjct: 404 NSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVK 463

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
             F  N ++S+ALL++Y+ C               +++  W +MI  YG  G    +I+L
Sbjct: 464 HAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDL 523

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F EM   G+ P   +  S+LS CSH+G+V    +Y+++M + +++ P  +H+ C+VD+L 
Sbjct: 524 FGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLA 583

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G L+EA EFI N+P+Q    VWGA L  C  H   + G++  + +  L PE    Y+ 
Sbjct: 584 RAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVL 643

Query: 763 LSNMYVALGRWKDAVEIGK 781
           +SN+Y + G W+ +  I +
Sbjct: 644 ISNLYTSNGMWEKSQAIRR 662



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 233/480 (48%), Gaps = 21/480 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+     E +  +F     ++VV+W +M++ CV+N     GL  F +M ++ +  
Sbjct: 172 SLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPP 231

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T+  +++A + +  L QGR +H   IK G++++S +    ++MY KCG+L  ++C F
Sbjct: 232 SEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVF 291

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V W T++ G   N  P   L  F +  ++    ++V++++ ++ASA L +LS
Sbjct: 292 DELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLS 351

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH + +KLG  +  Y  V N+L+ MY++C  +  A R F  ++ KDVV+WN+++ G
Sbjct: 352 LGRSIHGIAVKLGLVE--YTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSG 409

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI--SLCADSLLLREGRSVHGYAIRRLL 309
           +A N    +A  L  +M L +   PD  +VV  +  S+C   LL+  G+S HGYA++   
Sbjct: 410 YAENNMCNDALMLFKQMSL-KGPSPDAISVVHALSASVCLGDLLI--GKSFHGYAVKHAF 466

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ +  +L++ Y+K   L  A  +F+ +   N  V+W +MI G            LF 
Sbjct: 467 LSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNS-VTWCAMIGGYGMQGDSAGSIDLFG 525

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINC 416
           EML      +     +IL +C+    +   K            + +      ++ +    
Sbjct: 526 EMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARA 585

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L  A   +  +   +DTS W   +  C  +   Q   +  K M       PD   L++
Sbjct: 586 GNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLIS 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 247/541 (45%), Gaps = 61/541 (11%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            L  L   T LL+ Y+ +    S+  +F  T   D  ++  M+   V+       +    
Sbjct: 60  LLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQ 119

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQ-----GRVVHCLSIKAGMIADSSLCNVFVNM 117
           +M       ++    ++  AL    C++      G  +HC ++K G  AD  + N  V+M
Sbjct: 120 DMRRRRPCPEAQDDFVLSLALKA--CIRSADYGYGTRLHCDAVKVGG-ADGFVMNSLVDM 176

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK GDL  +   F  +   + VSW +++SGC+ N +    LL F +M          ++
Sbjct: 177 YAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTI 236

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           ++ + A + L  L  G+ +H   IK G   + ++S   +L+ MY +CG++E A+  F  +
Sbjct: 237 ATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISA--ALLDMYVKCGELEDAQCVFDEL 294

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +  D+V W  +I G+  NG   +A  L  + +   ++ P+  T+ T++S  A    L  G
Sbjct: 295 SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFA-NIVPNSVTIATVLSASAQLRDLSLG 353

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           RS+HG A++  L    +++N+L+D Y+K  ++S+A  +F +I+   D+V+WNSM+SG   
Sbjct: 354 RSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISN-KDVVAWNSMLSGYAE 412

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LFK+M          +++  L +      L  GKS H + +K  F +N   
Sbjct: 413 NNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYV 472

Query: 406 VNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNI------------------------ 440
             AL+++Y  CGDL +A  +   ++  NS T C  I                        
Sbjct: 473 STALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGV 532

Query: 441 ---------VIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVNVISACGNLELAF 488
                    ++  C+  G    A + F SM Q  N +P       +V+V++  GNLE A 
Sbjct: 533 HPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEAL 592

Query: 489 E 489
           E
Sbjct: 593 E 593



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G +++   S +LL  Y      E +  +F E    D+V W  MI    +N   +  L  
Sbjct: 262 QGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRL 321

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +     I  +S T+  ++SA  Q+  L  GR +H +++K G++  + + N  V+MYAK
Sbjct: 322 FLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAK 381

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  ++ +   F  +   D V+WN+++SG   NN     L+ F++M   G   D +S+  A
Sbjct: 382 CQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHA 441

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++AS CLG+L  GK  H   +K  +  + YVS   +L+++Y++CGD+ +A R F  M  +
Sbjct: 442 LSASVCLGDLLIGKSFHGYAVKHAFLSNIYVS--TALLNLYNKCGDLPSARRVFDEMNDR 499

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           + V+W A+I G+ + G    + DL  EM L   V P+     +++S C+
Sbjct: 500 NSVTWCAMIGGYGMQGDSAGSIDLFGEM-LKDGVHPNDVAFTSILSTCS 547



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 144/329 (43%), Gaps = 28/329 (8%)

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKS---IHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           L    S   LL +LPSC +  SL    +    H   L LG   +      L+  Y   GD
Sbjct: 23  LARALSAGDLLRLLPSCGTLPSLRVLHARLLTHTQGLLLG---SLRARTKLLSCYAALGD 79

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--NASPDSVTLVN 476
           L +A  +    +   D   + +++    Q     EA+   + M +++    + D   L  
Sbjct: 80  LASARMVFDG-TPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSL 138

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            + AC        G  LH  A+K + G D  V N+L+ MY +  D++ A  VFE     N
Sbjct: 139 ALKACIRSADYGYGTRLHCDAVK-VGGADGFVMNSLVDMYAKAGDLECARKVFERIPGRN 197

Query: 537 LCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W  M+S   QN      L LF   R     P+E +I ++++AC+ L  L  G+ +HG
Sbjct: 198 VVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHG 257

Query: 594 HVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWE 638
            V   G   NSFIS+ALLDMY  C                    W++MI  Y  +G   +
Sbjct: 258 SVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLD 317

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSH 667
           A+ LF +   + I P   ++ ++LSA + 
Sbjct: 318 ALRLFLDKKFANIVPNSVTIATVLSASAQ 346


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 172/535 (32%), Positives = 288/535 (53%), Gaps = 34/535 (6%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T  +L+ LCA    L  GR+VH     R L  + L   +L + Y+K      A  +
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPE 382
           F+ + P  D V+WN++++G  +  L   +             +    TL+++LP+C   +
Sbjct: 283 FDRM-PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQ 341

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +L   + +H + ++ GF        A++ +Y  CG + +A  +   +   +  S WN +I
Sbjct: 342 ALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVS-WNAMI 400

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               +NG   EA+  FK M  +     D V+++  + ACG L    EG+ +H L ++  +
Sbjct: 401 KGYAENGDATEALALFKRMVGEGVDVTD-VSVLAALHACGELGFLDEGRRVHELLVRIGL 459

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             +  V NALITMY +C+    A+ VF+        +WN MI   +QN +   A+ LF  
Sbjct: 460 ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSR 519

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           ++ E   P+  ++VSI+ A   +      + IHG+   L   ++ ++ +AL+DMY+ C  
Sbjct: 520 MQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 579

Query: 620 --------NAA-------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                   N+A       W++MI  YG HG G  A+ELF EM +SG  P +++ +S+LSA
Sbjct: 580 VSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSA 639

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSH+GLVDEG +Y+++M E+Y + P  EH+  +VD+LGR+GKL EA+ FI+ +P++P   
Sbjct: 640 CSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGIS 699

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           V+GAML AC  H + ++ ++ A+ +F+LEPE   Y++ L+N+Y     WKD   +
Sbjct: 700 VYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARV 754



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 221/459 (48%), Gaps = 18/459 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       +T+L   Y+       +  +F     +D V WNA++     N      +  
Sbjct: 254 RGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGM 313

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              M EE G R D+ TL+ ++ A      L   R VH  +++ G     ++    +++Y 
Sbjct: 314 VVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYC 373

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG ++S+   F GM   ++VSWN ++ G   N    + L  F+ M   G    +VS+ +
Sbjct: 374 KCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLA 433

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+ A   LG L  G+ +H L +++G E +  V+V N+LI+MY +C   + A + F  +  
Sbjct: 434 ALHACGELGFLDEGRRVHELLVRIGLESN--VNVMNALITMYCKCKRTDLAAQVFDELGY 491

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K  VSWNA+I G   NG  E+A  L   MQL  +V+PD  T+V++I   AD     + R 
Sbjct: 492 KTRVSWNAMILGCTQNGSSEDAVRLFSRMQL-ENVKPDSFTLVSIIPALADISDPLQARW 550

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY+IR  L  D+ ++ +L+D Y+K   +S A  LFN+ A    +++WN+MI G     
Sbjct: 551 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS-ARDRHVITWNAMIHGYGSHG 609

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGV 406
                  LF+EM       + +T L++L +C+    ++ G+      +   G        
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHY 669

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             ++ +    G L  A+S +Q++      S +  ++ AC
Sbjct: 670 GTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGAC 708



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 139/516 (26%), Positives = 238/516 (46%), Gaps = 33/516 (6%)

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
           T+LL + +A      L  GR VH      G+  ++       NMYAKC     +   F  
Sbjct: 229 TSLLKLCAARAD---LATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDR 285

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           M   D V+WN +++G   N   E  + +  R     GE+ D V+L S + A A    L  
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            + +HA  ++ G+++   V+V+ +++ +Y +CG +++A + F GM  ++ VSWNA+I G+
Sbjct: 346 CREVHAFAVRGGFDEQ--VNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGY 403

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A NG   EA  L   M +   V+    +V+  +  C +   L EGR VH   +R  L  +
Sbjct: 404 AENGDATEALALFKRM-VGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESN 462

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           + +MN+L+  Y K      A  +F+ +      VSWN+MI G            LF  M 
Sbjct: 463 VNVMNALITMYCKCKRTDLAAQVFDELG-YKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ 521

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               +    TL++I+P+          + IH + ++L    +   + AL+ MY  CG + 
Sbjct: 522 LENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVS 581

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A SL    + +     WN +I     +G  + A++ F+ M +     P+  T ++V+SA
Sbjct: 582 IARSLFNS-ARDRHVITWNAMIHGYGSHGSGKVAVELFEEM-KSSGKVPNETTFLSVLSA 639

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESCYNCNL 537
           C +  L  EG+     ++K   GL+  +++   ++ + GR   +  A S + +      +
Sbjct: 640 CSHAGLVDEGQEYFS-SMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGI 698

Query: 538 CTWNCMISAFSQNK----AEVRALELFRHLEFEPNE 569
             +  M+ A   +K    AE  A  +F   E EP E
Sbjct: 699 SVYGAMLGACKLHKNVELAEESAQRIF---ELEPEE 731



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 146/337 (43%), Gaps = 32/337 (9%)

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A       + A+  F +M+    + P   T  +++  C        G+++H       + 
Sbjct: 198 AAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLS 257

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +     AL  MY +CR    A  VF+     +   WN +++ +++N     A+ +   +
Sbjct: 258 PEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRM 317

Query: 564 EFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           + E    P+ +++VS+L AC     L   +++H      GF E   +S+A+LD+Y  C  
Sbjct: 318 QEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGA 377

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        +++ +W++MI  Y  +G   EA+ LF  M   G+  T  SV++ L A
Sbjct: 378 VDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHA 437

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQ 720
           C   G +DEG + +     E  VR   E +V     ++ M  +  +   A +    L  +
Sbjct: 438 CGELGFLDEGRRVH-----ELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYK 492

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            +   W AM+  C+ +G +   +    L  +++ ENV
Sbjct: 493 TRVS-WNAMILGCTQNGSS---EDAVRLFSRMQLENV 525


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 207/737 (28%), Positives = 346/737 (46%), Gaps = 40/737 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++  +     L  G+ VH    K+ M     + ++ V MY  CG L  ++  F  M   D
Sbjct: 4   LLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQD 63

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL-SYGKVIH 197
            ++W  ++         E+ L  FR M   G    N +  + + A +   EL   G+ IH
Sbjct: 64  ALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIH 123

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            +      E   YVS T  L+ MY +C  +E A + F G+  K VV WNA+I  +A    
Sbjct: 124 GVLRGTAMESDHYVSTT--LLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--DLLM 315
            E+A  + + M L+  V+ +  T + ++  C+    L   + V      R   +  D   
Sbjct: 182 HEQAIQVFYAM-LLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 316 MNSLMDFYSKSNSLSKAELLFNA-----------IAPMNDLVSWNSMISGLFKEMLYLCS 364
             +L++FY     L +A   F+            I        W+  +  LFK ML    
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALE-LFKVMLLEGV 299

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +      +A+L +C+ P  LE G+ IH +  ++ F  +    NAL++MY  CG L  A  
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVE 359

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           + + + H  D   WN +I A  Q+    EA+     M Q      D ++ VN +  C   
Sbjct: 360 VFRSMQHR-DVISWNTIIAAHGQHSQHPEALHLLHLM-QLDGVKADKISFVNALPLCATS 417

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           E   +G+ +H   ++S +  D  + NA++ MYG C+    AS VF +    +  +WN MI
Sbjct: 418 EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMI 477

Query: 545 SAFS-QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           +A++ Q +    AL LF+ ++   F P+ IS V+ LSAC     L  GK +H  +   G 
Sbjct: 478 TAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGL 537

Query: 601 QENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHE 645
           + N  +++A+L+MY+   +                 +W+ MISA+  HG   + +  F  
Sbjct: 538 ESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRR 597

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD-VRPETEHHVCIVDMLGRS 704
           M + G  P   + +S++SACSH GLV +G+Q + ++L ++  + P  EH+ C+VD++ R+
Sbjct: 598 MNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARA 657

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           GKL  A +FI   P++P   +   ML A   H D +  ++ AE L +L P+    Y+ LS
Sbjct: 658 GKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLS 717

Query: 765 NMYVALGRWKDAVEIGK 781
           N+Y  +G+  +  +I +
Sbjct: 718 NLYDEVGKKDEGAKIRR 734



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 286/620 (46%), Gaps = 27/620 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ST+LL  Y   S  E +  +F    +K VV WNAMITA  +       +  F  M+ EG
Sbjct: 137 VSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEG 196

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVH-CLSIKA-GMIADSSLCNVFVNMYAKCGDLNS 126
           ++ +  T + ++ A +++  L+  ++V  C+  +    + DSS     VN Y  CGDL  
Sbjct: 197 VKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQ 256

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   FS  H  + +    +++        ++ L  F+ M   G + D ++  + + A + 
Sbjct: 257 AFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSG 315

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              L  G++IH    ++ ++   +V+  N+LI+MY +CG +E A   F  M  +DV+SWN
Sbjct: 316 PRGLEEGRIIHGFMREIRFD--RHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWN 373

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            II     + +  EA  LLH MQL   V+ D  + V  + LCA S  L +GR +H + + 
Sbjct: 374 TIIAAHGQHSQHPEALHLLHLMQL-DGVKADKISFVNALPLCATSEALAKGRMIHSWIVE 432

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------LFKEML 360
             +  D+++ N+++D Y    S   A  +F A+  + D VSWN+MI+       L  E L
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAM-KVRDQVSWNAMITAYAAQPRLSSEAL 491

Query: 361 YLCSQFSFSTLLAILPS-------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L  Q      +  + S       C +  SL  GK +H    + G  +N    NA+++MY
Sbjct: 492 LLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMY 551

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G LV A  +  ++    D   WN +I A  Q+GH  + ++ F+ M  +    P+ VT
Sbjct: 552 AKSGTLVLARKMFGKMP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKL-PNDVT 609

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            V+V+SAC +  L  +G  L    L     +  R ++   ++ +  R   + +A     +
Sbjct: 610 FVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAA 669

Query: 532 C-YNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEISIVSILSAC-TQLGVLRHG 588
                +    + M+ A   +K   RA +   HL E  P+  +   +LS    ++G    G
Sbjct: 670 APLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEG 729

Query: 589 KQIHGHVFHLGFQENSFISS 608
            +I   ++    ++    SS
Sbjct: 730 AKIRRLMYEKNIRKEPAFSS 749



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 4/296 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  H+    +L+  Y      E ++ +F    ++DV++WN +I A  ++      LH   
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLH 393

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M  +G++ D  + +  +        L +GR++H   +++G+ AD  L N  ++MY  C 
Sbjct: 394 LMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCK 453

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + +   F  M   D VSWN +++          + LL F++M   G   D +S  +A+
Sbjct: 454 STDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAAL 513

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A    L+ GK++H    + G E +  ++V N++++MY++ G +  A + F  M   D
Sbjct: 514 SACAAQASLAEGKLLHDRIRETGLESN--MTVANAVLNMYAKSGTLVLARKMFGKMPLPD 571

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN +I  FA +G  ++       M     + P+  T V+++S C+   L+++G
Sbjct: 572 VISWNGMISAFAQHGHADQVLRFFRRMNHEGKL-PNDVTFVSVVSACSHGGLVKDG 626



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 145/318 (45%), Gaps = 25/318 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           G  A +    ++L  Y +    + +  +F     +D V+WNAMITA   + R     L  
Sbjct: 434 GIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLL 493

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   G   D  + +  +SA      L +G+++H    + G+ ++ ++ N  +NMYAK
Sbjct: 494 FQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAK 553

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F  M   D +SWN ++S    + + ++ L +FR M   G+  ++V+  S 
Sbjct: 554 SGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSV 613

Query: 181 VAASACLGELSYGKVIHALGIKLGY---EDSPYVSVTNS----LISMYSQCGDIEAAERA 233
           V  SAC    S+G ++   G++L      D P +S        ++ + ++ G ++AAE+ 
Sbjct: 614 V--SAC----SHGGLVKD-GVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKF 666

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADS 291
                 K D V  + ++    ++   E A     H M+L     PD +    ++S   D 
Sbjct: 667 IAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT----PDRSAAYVVLSNLYDE 722

Query: 292 LLLREGRSVHGYAIRRLL 309
           +    G+   G  IRRL+
Sbjct: 723 V----GKKDEGAKIRRLM 736


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 229/763 (30%), Positives = 368/763 (48%), Gaps = 48/763 (6%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK 101
           +  I   V+    V  L F+        RF   +LL     L+    L+ G+ +H   I 
Sbjct: 21  DPKIVTLVQQGQYVDALQFYSRNPLNATRFTYPSLLKACGFLSN---LQYGKTIHSTIIT 77

Query: 102 AGMI-ADSSLCNVFVNMYAKCGDLNSSECTF-----SGMHCADTVSWNTIMSGCLHNNYP 155
            G   +D  +    +N Y KCG   ++   F     S +   D   WN+I++G     + 
Sbjct: 78  KGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHK 137

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           ++ +  F  M   G + D  SL   + AS   G L Y K IH   ++  +   P++   +
Sbjct: 138 KEGIAQFCRMQLFGVRPDAYSLCILLGASD--GHLGYAKQIHGYSVRKVFYGDPFLE--S 193

Query: 216 SLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            LI MY  CG    A R F  +  K +VV+WN +I GF  NG +E + ++ + +    +V
Sbjct: 194 GLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEV-YLLAKNENV 252

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +   A+  + +S C     +  G  VH   ++     D  +  SL+  YSK   +  AE 
Sbjct: 253 KLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAEN 312

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ ++ +     WN+MIS             ++K+M  L       T   +L SC    
Sbjct: 313 VFDQVS-VKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVG 371

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           S +FG+ IH   +K    +N    +AL+ MY  CG+   A S+   I    D   W  +I
Sbjct: 372 SYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIK-GRDVVAWGSMI 430

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               QN  + EA++ + SMT      PDS  + +V+SAC  L+    G ++HGLA+KS +
Sbjct: 431 SGFCQNRKYMEALEFYNSMTVY-GEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGL 489

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  V ++L+ MY +    K +  VF      NL  WN +IS + +N     ++ LF  
Sbjct: 490 EQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQ 549

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +      P+ +SI S+L + + + VLR GK +HG++       +  + +AL+DMY  C  
Sbjct: 550 MTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGF 609

Query: 618 ------------KSN-AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                       ++N   W+ MI+  G HG   +A+ LF EM + GI P   + ISLL++
Sbjct: 610 LKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTS 669

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C+H G ++EGL+ +  M  E+ + P  EH+V IVD+LGR+G+L +AY F+KNLPI+P   
Sbjct: 670 CNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRS 729

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +W ++L +C  H + ++GK  A  L  +EP     Y+ L N+Y
Sbjct: 730 IWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLY 772



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 253/512 (49%), Gaps = 22/512 (4%)

Query: 29  LFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMN 87
           LF E  +K +VV WN MI    EN      L  +     E ++  S +    +SA  Q  
Sbjct: 211 LFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGE 270

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            +  G  VHC  +K G   D  +C   + MY+KC  +  +E  F  +    T  WN ++S
Sbjct: 271 FVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMIS 330

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
             + N      L  +++M       D+++ ++ +++   +G   +G++IHA  +K   + 
Sbjct: 331 AYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQS 390

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V++ ++L++MYS+CG+ + A   F  +  +DVV+W ++I GF  N K+ EA +  + 
Sbjct: 391 N--VALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNS 448

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +    +PD   + +++S C     +  G ++HG AI+  L  D+ + +SL+D YSK N
Sbjct: 449 MTVYGE-KPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFN 507

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEML--YLCSQFSFSTLLAILPS-------- 377
               +  +F+ + P+ +LV+WNS+IS   +  L     S FS  T   + P         
Sbjct: 508 FPKMSGNVFSDM-PLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVL 566

Query: 378 --CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
              +S   L  GK++H + ++    ++    NAL+ MYI CG L  A  + Q +   ++ 
Sbjct: 567 VSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQ-TNL 625

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WNI+I  C  +G + +A+  F  M +    +PD +T ++++++C +     EG  L  
Sbjct: 626 VTWNIMIAGCGSHGDWLKAMSLFDEM-RSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQ 684

Query: 496 LALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           L +    G++ R+++   ++ + GR   +  A
Sbjct: 685 L-MTVEHGIEPRMEHYVNIVDLLGRAGRLDDA 715



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 226/465 (48%), Gaps = 33/465 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       TSLLT YS     E +  +F +   K    WNAMI+A V N     GL  +
Sbjct: 286 GFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIY 345

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    I  DS T   ++S+   +     GR++H   +K  + ++ +L +  + MY+KC
Sbjct: 346 KQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKC 405

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+ + +   F+ +   D V+W +++SG   N    + L ++  M   GE+ D+  ++S V
Sbjct: 406 GNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVV 465

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   L  ++ G  IH L IK G E    V V +SL+ MYS+    + +   F  M  K+
Sbjct: 466 SACTGLKNVNLGCTIHGLAIKSGLEQD--VFVASSLVDMYSKFNFPKMSGNVFSDMPLKN 523

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+WN+II  +  NG  + +  L  +M     + PD  ++ +++   +   +LR+G++VH
Sbjct: 524 LVAWNSIISCYCRNGLPDLSISLFSQMT-QYGLFPDSVSITSVLVSVSSVAVLRKGKAVH 582

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           GY IR+ +  DL + N+L+D Y K   L  A+ +F  +   N LV+WN MI+G       
Sbjct: 583 GYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTN-LVTWNIMIAGCGSHGDW 641

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI--GVN 407
                LF EM          T +++L SCN    +E G       LKL F   T+  G+ 
Sbjct: 642 LKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEG-------LKL-FQLMTVEHGIE 693

Query: 408 ALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVAC 445
             M  Y+N  DL+        A++ ++ +    D S W  ++ +C
Sbjct: 694 PRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSC 738



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 3/297 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   +++   ++LLT YS     + + ++F     +DVV W +MI+   +NR  +  L F
Sbjct: 386 RPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEF 445

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M   G + DS  +  +VSA T +  +  G  +H L+IK+G+  D  + +  V+MY+K
Sbjct: 446 YNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSK 505

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
                 S   FS M   + V+WN+I+S    N  P+  +  F +M   G   D+VS++S 
Sbjct: 506 FNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSV 565

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + + + +  L  GK +H   I+        + + N+LI MY +CG ++ A+  F  M   
Sbjct: 566 LVSVSSVAVLRKGKAVHGYLIRQRIPSD--LQLENALIDMYIKCGFLKYAQHIFQNMLQT 623

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           ++V+WN +I G   +G + +A  L  EM+    + PD  T ++L++ C     + EG
Sbjct: 624 NLVTWNIMIAGCGSHGDWLKAMSLFDEMRSF-GIAPDDITFISLLTSCNHCGFIEEG 679


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 217/677 (32%), Positives = 338/677 (49%), Gaps = 49/677 (7%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS---SAVAASACLGELSYGK 194
           D   +++++  C+H       +  FR++  S    ++ ++S    A   S    +L   +
Sbjct: 12  DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           V   L  K G +   +V V  SL+++Y + G + +A+  F  M  +D V WNA+I G++ 
Sbjct: 72  VQTHL-TKSGLDR--FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           NG   +A+ L   M L +   P   T+V L+  C     + +GRSVHG A +  L  D  
Sbjct: 129 NGYECDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL-------FKEMLYL 362
           + N+L+ FYSK   L  AE+LF  +      VSWN+MI     SGL       FK M   
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             + S  T++ +L +  S E L      HC  +K G  N+   V +L+  Y  CG LV+A
Sbjct: 247 NVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300

Query: 423 FSLLQRISHNSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
             L    S   D+      IV+C  + G    A+  F S T+Q     D+V LV ++  C
Sbjct: 301 ERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYF-SKTRQLCMKIDAVALVGILHGC 357

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                   G SLHG A+KS +   T V N LITMY +  D+++   +FE      L +WN
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417

Query: 542 CMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
            +IS   Q+     A E+F  +       P+ I+I S+L+ C+QL  L  GK++HG+   
Sbjct: 418 SVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR 477

Query: 598 LGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIEL 642
             F+  +F+ +AL+DMY+ C +                A W+SMIS Y   G    A+  
Sbjct: 478 NNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSC 537

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           + EM   G++P + + + +LSAC+H G VDEG   +  M++E+ + P  +H+  +V +LG
Sbjct: 538 YLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLG 597

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+    EA   I  + I+P   VWGA+LSAC  H + ++G+ VA  +F L+ +N G Y+ 
Sbjct: 598 RACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 657

Query: 763 LSNMYVALGRWKDAVEI 779
           +SN+Y     W D V +
Sbjct: 658 MSNLYATEAMWDDVVRV 674



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 234/494 (47%), Gaps = 25/494 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLL  Y       S+  LF E   +D V WNA+I     N         F  M+++G  
Sbjct: 89  TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             +TTL+ ++    Q   + QGR VH ++ K+G+  DS + N  ++ Y+KC +L S+E  
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M    TVSWNT++     +   E+ +  F+ M        NV +S     +     +
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF-----EKNVEISPVTIINLLSAHV 263

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S+ + +H L +K G  +   +SV  SL+  YS+CG + +AER +       +V   +I+ 
Sbjct: 264 SH-EPLHCLVVKCGMVND--ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A  G  + A     + + +  ++ D   +V ++  C  S  +  G S+HGYAI+  L 
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
              L++N L+  YSK + +     LF  +     L+SWNS+ISG            +F +
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQ 438

Query: 359 MLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           M+        + T+ ++L  C+    L  GK +H + L+  F N      AL+ MY  CG
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCG 498

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           + V A S+ + I     T+ WN +I   + +G    A+  +  M +++   PD +T + V
Sbjct: 499 NEVQAESVFKSIKAPC-TATWNSMISGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGV 556

Query: 478 ISACGNLELAFEGK 491
           +SAC +     EGK
Sbjct: 557 LSACNHGGFVDEGK 570



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 4/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   TSL+ AYS      S+  L+       +V   ++++   E   + + + +F
Sbjct: 276 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 335

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +  +  ++ D+  L+ I+    + + +  G  +H  +IK+G+   + + N  + MY+K 
Sbjct: 336 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
            D+ +    F  +     +SWN+++SGC+ +         F +M  +G    D ++++S 
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +A  + L  L+ GK +H   ++  +E+  +  V  +LI MY++CG+   AE  F  +   
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENF--VCTALIDMYAKCGNEVQAESVFKSIKAP 513

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
              +WN++I G++L+G    A     EM+  + ++PD  T + ++S C     + EG+
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHGGFVDEGK 570


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 233/811 (28%), Positives = 384/811 (47%), Gaps = 97/811 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-------CVENRCVVMGLHFFGEM 64
           +L++ YS       +  +F +   +D+V+WN+++ A        VEN   V        +
Sbjct: 86  NLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVEN---VKEAFLLFRI 142

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRV-----VHCLSIKAGMIADSSLCNVFVNMYA 119
           + + + + S   L   S + ++ CL  G V      H  + K G+  D  +    VN+Y 
Sbjct: 143 LRQDVVYTSRMTL---SPMLKL-CLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYL 198

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G +      F  M   D V WN ++   L             EMG+  E  D   LSS
Sbjct: 199 KFGKVKEGRVLFEEMPYRDVVLWNLMLKAYL-------------EMGFKEEAID---LSS 242

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A   S     L   ++   L  ++  +DS              + G +++ E        
Sbjct: 243 AFHTSG----LHPNEITLRLLSRISGDDS--------------EAGQVKSFENGNDASAV 284

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREG 297
            +++S N I+ G+   G++        +M +   +E D  T + +++     DSL L  G
Sbjct: 285 SEIISRNKILSGYLHAGQYSALLKCFMDM-VESDLECDQVTFILVLATAVRLDSLAL--G 341

Query: 298 RSVHGYAIRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           + VH  A++  LG DL++   NSL++ Y K   +  A  +FN ++   DL+SWNS+I+G 
Sbjct: 342 QQVHCMALK--LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE-RDLISWNSVIAGI 398

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNN 402
                      LF ++L    +    T+ ++L + +S PE L   K IH   +K     +
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           +    AL+  Y     +  A  L  R  +N D   WN ++   TQ+    + ++ F  M 
Sbjct: 459 SFVSTALIDAYSRNRCMKEAEVLFGR--NNFDLVAWNAMMSGYTQSHDGHKTLELFALMH 516

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           +Q   S D  TL  V+  CG L    +GK +H  A+KS   LD  V + ++ MY +C D+
Sbjct: 517 KQGERS-DDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 575

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC 579
            +A   F+S    +   W  +IS   +N  E RAL +F  +      P+E +I ++  A 
Sbjct: 576 SAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKAS 635

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWS 624
           + L  L  G+QIH +   L    + F+ ++L+DMY+ C S                 AW+
Sbjct: 636 SCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 695

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +M+     HG+G EA++LF +M + GI+P K + I +LSACSHSGLV E  +Y  +M  +
Sbjct: 696 AMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRD 755

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           Y ++PE EH+ C+ D LGR+G ++EA   I ++ ++    ++  +L+AC   GDT+ GK+
Sbjct: 756 YGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKR 815

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           VA  L +LEP +   Y+ LSNMY A  +W +
Sbjct: 816 VATKLLELEPLDSSAYVLLSNMYAAASKWDE 846



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 173/701 (24%), Positives = 303/701 (43%), Gaps = 95/701 (13%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS-------GCLHNNYPEKCLLYF 162
           L N  ++MY+KCG L  +   F  M   D VSWN+I++       G + N   ++  L F
Sbjct: 83  LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVEN--VKEAFLLF 140

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYS 222
           R +         ++LS  +      G +   +  H    K+G +   +V+   +L+++Y 
Sbjct: 141 RILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVA--GALVNIYL 198

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           + G ++     F  M  +DVV WN ++  +   G  EEA DL         + P+  T+ 
Sbjct: 199 KFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-TSGLHPNEITLR 257

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
            L  +  D     E   V  +                       N         N  + +
Sbjct: 258 LLSRISGDD---SEAGQVKSF----------------------ENG--------NDASAV 284

Query: 343 NDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESLEFG 387
           ++++S N ++SG             F +M+     C Q +F   + +L +    +SL  G
Sbjct: 285 SEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTF---ILVLATAVRLDSLALG 341

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           + +HC  LKLG        N+L++MY     +  A ++   +S   D   WN VI    Q
Sbjct: 342 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER-DLISWNSVIAGIAQ 400

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDT 506
           +    EA+  F  +  +    PD  T+ +V+ A  +L       K +H  A+K+    D+
Sbjct: 401 SDLEVEAVCLFMQLL-RCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--HLE 564
            V  ALI  Y R R +K A  +F    N +L  WN M+S ++Q+    + LELF   H +
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518

Query: 565 FE-PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
            E  ++ ++ ++L  C  L  +  GKQ+H +    G+  + ++SS +LDMY  C      
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                      + AW+++IS    +G+   A+ +F +M   G+ P + ++ +L  A S  
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
             +++G Q + N L + +   +      +VDM  + G + +AY   K + +      W A
Sbjct: 639 TALEQGRQIHANAL-KLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNA 696

Query: 729 MLSACSHHGDTKMGKQVAELLFKLE-----PENVGYYISLS 764
           ML   + HG+   GK+  +L  ++E     P+ V +   LS
Sbjct: 697 MLVGLAQHGE---GKEALQLFKQMESLGIKPDKVTFIGVLS 734



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 160/589 (27%), Positives = 265/589 (44%), Gaps = 69/589 (11%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  GK  HA  + L  E++P   + N+LISMYS+CG +  A R F  M  +D+VSWN+I
Sbjct: 61  DLMLGKCTHARILAL--EENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSI 118

Query: 249 IDGFALNGK-----FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +  +A + +      +EAF LL  +     V     T+  ++ LC  S  +    S HGY
Sbjct: 119 LAAYAQSSEGVVENVKEAF-LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGY 177

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE 358
           A +  L  D  +  +L++ Y K   + +  +LF  + P  D+V WN M+      G  +E
Sbjct: 178 ACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEM-PYRDVVLWNLMLKAYLEMGFKEE 236

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA---LMHMYIN 415
            + L S F  S L                   H  ++ L   +   G ++    +  + N
Sbjct: 237 AIDLSSAFHTSGL-------------------HPNEITLRLLSRISGDDSEAGQVKSFEN 277

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
             D  A   ++ R          N ++      G +   +K F  M  + +   D VT +
Sbjct: 278 GNDASAVSEIISR----------NKILSGYLHAGQYSALLKCFMDMV-ESDLECDQVTFI 326

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
            V++    L+    G+ +H +ALK  + L   V N+LI MY + R I  A TVF +    
Sbjct: 327 LVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER 386

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV-LRHGKQI 591
           +L +WN +I+  +Q+  EV A+ LF  L     +P+  ++ S+L A + L   L   KQI
Sbjct: 387 DLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQI 446

Query: 592 HGHVFHLGFQENSFISSALLDMYS--NCKSNA------------AWSSMISAYGYHGKGW 637
           H H        +SF+S+AL+D YS   C   A            AW++M+S Y     G 
Sbjct: 447 HVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGH 506

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVC 696
           + +ELF  M   G R    ++ ++L  C     +++G Q +   ++  YD+  +      
Sbjct: 507 KTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSG 564

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
           I+DM  + G +  A     ++P+ P    W  ++S C  +G+ +    V
Sbjct: 565 ILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGCIENGEEERALHV 612



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 3/238 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  S+ +L  Y       ++   F      D V W  +I+ C+EN      LH F
Sbjct: 554 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVF 613

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D  T+  +  A + +  L+QGR +H  ++K    +D  +    V+MYAKC
Sbjct: 614 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKC 673

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ + C F  +   +  +WN ++ G   +   ++ L  F++M   G + D V+    +
Sbjct: 674 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVL 733

Query: 182 AASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +A +  G +S   K I ++    G +  P +   + L     + G ++ AE     M+
Sbjct: 734 SACSHSGLVSEAYKYIRSMHRDYGIK--PEIEHYSCLADALGRAGLVKEAENLIDSMS 789



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 10/201 (4%)

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S   L  GK  H   L L  +     VN L+ MY  CG L  A  +  ++    D   WN
Sbjct: 58  STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER-DLVSWN 116

Query: 440 IVIVACTQNG-----HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
            ++ A  Q+      + +EA   F+ + +Q       +TL  ++  C +       +S H
Sbjct: 117 SILAAYAQSSEGVVENVKEAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFH 175

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           G A K  +  D  V  AL+ +Y +   +K    +FE     ++  WN M+ A+ +   + 
Sbjct: 176 GYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKE 235

Query: 555 RALEL---FRHLEFEPNEISI 572
            A++L   F      PNEI++
Sbjct: 236 EAIDLSSAFHTSGLHPNEITL 256


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 309/596 (51%), Gaps = 36/596 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N ++SMY +CG +  A   F  M  +++VS+ ++I G++ NG+  EA  L  +M L  
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQE 162

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            + PD     ++I  CA S  +  G+ +H   I+      L+  N+L+  Y + N +S A
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 222

Query: 333 ELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQFSFSTLL-------AILPSCN 379
             +F  I PM DL+SW+S+I+G       F+ + +L    SF           + L +C+
Sbjct: 223 SRVFYGI-PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S    ++G  IH   +K   + N I   +L  MY  CG L +A  +  +I    DT+ WN
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI-ERPDTASWN 340

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++I     NG+  EA+  F  M +     PD+++L +++ A        +G  +H   +K
Sbjct: 341 VIIAGLANNGYADEAVSVFSQM-RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALE 558
                D  V N+L+TMY  C D+     +FE   N  +  +WN +++A  Q++  V  L 
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +   E EP+ I++ ++L  C ++  L+ G Q+H +    G     FI + L+DMY+
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               +   +WS++I  Y   G G EA+ LF EM ++GI P   + + 
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +L+ACSH GLV+EGL+ Y  M  E+ + P  EH  C+VD+L R+G+L EA  FI  + ++
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           P   VW  +LSAC   G+  + ++ AE + K++P N   ++ L +M+ + G W++A
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/669 (27%), Positives = 313/669 (46%), Gaps = 44/669 (6%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T + ++ A +    L QGR +H   + +    D+ L N  ++MY KCG L  +   F  M
Sbjct: 69  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
              + VS+ ++++G   N    + +  + +M       D  +  S + A A   ++  GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
            +HA  IKL  E S ++   N+LI+MY +   +  A R F+G+  KD++SW++II GF+ 
Sbjct: 189 QLHAQVIKL--ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
            G   EA   L EM       P+     + +  C+  L    G  +HG  I+  L  + +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS 369
              SL D Y++   L+ A  +F+ I    D  SWN +I+GL       E + + SQ   S
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQI-ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365

Query: 370 -------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
                  +L ++L +   P +L  G  IH + +K GF  +    N+L+ MY  C DL   
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           F+L +   +N+D+  WN ++ AC Q+    E ++ FK M   +   PD +T+ N++  C 
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLRGCV 484

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            +     G  +H  +LK+ +  +  ++N LI MY +C  +  A  +F+S  N ++ +W+ 
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544

Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +I  ++Q+     AL LF+ ++    EPN ++ V +L+AC+ +G++  G +++  +    
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM---- 600

Query: 600 FQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            Q    IS        +C      S ++      G+  EA     EM    + P      
Sbjct: 601 -QTEHGISPT----KEHC------SCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWK 646

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEA---YEFIK 715
           +LLSAC   G V    +   N+L+   + P  +  HV +  M   SG  + A      +K
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILK---IDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703

Query: 716 NLPIQPKPG 724
              ++  PG
Sbjct: 704 KHDVKKIPG 712



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 249/584 (42%), Gaps = 48/584 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L+ Y        +  +F     +++V++ ++IT   +N      +  + +M++E +  D
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                 I+ A    + +  G+ +H   IK    +     N  + MY +   ++ +   F 
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS 191
           G+   D +SW++I++G     +  + L + +EM   G    +     S++ A + L    
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG  IH L IK     +       SL  MY++CG + +A R F  +   D  SWN II G
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGC--SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A NG  +EA  +  +M+    + PD  ++ +L+      + L +G  +H Y I+     
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           DL + NSL+  Y+  + L     LF       D VSWN++++             LFK M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T+  +L  C    SL+ G  +HC+ LK G +      N L+ MY  CG L
Sbjct: 465 LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSL 524

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +  N D   W+ +IV   Q+G  +EA+  FK M +     P+ VT V V++
Sbjct: 525 GQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALILFKEM-KSAGIEPNHVTFVGVLT 582

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC ++ L  EG                      + +Y   +     S   E C     C 
Sbjct: 583 ACSHVGLVEEG----------------------LKLYATMQTEHGISPTKEHCS----CV 616

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
            + +  A   N+AE         ++ EP+ +   ++LSAC   G
Sbjct: 617 VDLLARAGRLNEAE----RFIDEMKLEPDVVVWKTLLSACKTQG 656



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 244/542 (45%), Gaps = 51/542 (9%)

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           + EA +     Q   S +  + T ++LI  C+ S  L +GR +H + +     YD ++ N
Sbjct: 47  YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YL 362
            ++  Y K  SL  A  +F+   P  +LVS+ S+I+G            L+ +ML    +
Sbjct: 107 HILSMYGKCGSLRDAREVFD-FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             QF+F +   I+ +C S   +  GK +H   +KL  S++ I  NAL+ MY+    +  A
Sbjct: 166 PDQFAFGS---IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 222

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +   I    D   W+ +I   +Q G   EA+   K M       P+     + + AC 
Sbjct: 223 SRVFYGIPMK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +L     G  +HGL +KS +  +     +L  MY RC  + SA  VF+     +  +WN 
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341

Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +I+  + N     A+ +F  +    F P+ IS+ S+L A T+   L  G QIH ++   G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401

Query: 600 FQENSFISSALLDMYSNC-------------KSNA---AWSSMISAYGYHGKGWEAIELF 643
           F  +  + ++LL MY+ C             ++NA   +W+++++A   H +  E + LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             M  S   P   ++ +LL  C     +  G Q +   L+   + PE      ++DM  +
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAK 520

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK------LEPENV 757
            G L +A     ++  +     W  ++   +  G    G++ A +LFK      +EP +V
Sbjct: 521 CGSLGQARRIFDSMDNRDVVS-WSTLIVGYAQSG---FGEE-ALILFKEMKSAGIEPNHV 575

Query: 758 GY 759
            +
Sbjct: 576 TF 577



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 234/505 (46%), Gaps = 32/505 (6%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           +HL    +L+  Y   +    +  +FY    KD+++W+++I    +       L    EM
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGM----IADSSLCNVFVNM 117
           +  G+   +    I  S+L   + L +   G  +H L IK+ +    IA  SLC+    M
Sbjct: 261 LSFGVFHPNE--YIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD----M 314

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+CG LNS+   F  +   DT SWN I++G  +N Y ++ +  F +M  SG   D +SL
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S + A      LS G  IH+  IK G+     ++V NSL++MY+ C D+      F   
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLAD--LTVCNSLLTMYTFCSDLYCCFNLFEDF 432

Query: 238 TCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
               D VSWN I+     + +  E   L  ++ L+   EPD  T+  L+  C +   L+ 
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKL 491

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  VH Y+++  L  +  + N L+D Y+K  SL +A  +F+++    D+VSW+++I G  
Sbjct: 492 GSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM-DNRDVVSWSTLIVGYA 550

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNT 403
                     LFKEM     + +  T + +L +C+    +E G  ++   Q + G S   
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              + ++ +    G L  A   +  +    D   W  ++ AC   G+   A K  +++ +
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670

Query: 464 -QQNASPDSVTLVNVISACGNLELA 487
                S   V L ++ ++ GN E A
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENA 695



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 3/257 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHF 60
           GFLA L    SLLT Y+  S       LF +   N D V+WN ++TAC+++   V  L  
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRL 460

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+      D  T+  ++    +++ LK G  VHC S+K G+  +  + N  ++MYAK
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAK 520

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  M   D VSW+T++ G   + + E+ L+ F+EM  +G + ++V+    
Sbjct: 521 CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGV 580

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + +G +  G  ++A  ++  +  SP     + ++ + ++ G +  AER    M  +
Sbjct: 581 LTACSHVGLVEEGLKLYAT-MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639

Query: 241 -DVVSWNAIIDGFALNG 256
            DVV W  ++      G
Sbjct: 640 PDVVVWKTLLSACKTQG 656


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 199/684 (29%), Positives = 332/684 (48%), Gaps = 44/684 (6%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D   +N ++     NN+  + L  F+++  SG   D ++LS A+     L + 
Sbjct: 61  FDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQ 120

Query: 191 SYGKVIHALGIKLGY-EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             G+ +H   +K G+ ED   VSV  SL+ MY +  D E     F  M  K+VVSW +++
Sbjct: 121 VVGRQVHCQSLKSGFLED---VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLL 177

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+A NG  +E   L+++MQ M  V P+  T  T++   AD  ++  G  VH   ++   
Sbjct: 178 SGYARNGLNDEVIHLINQMQ-MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            +   + N+L+  Y KS  +  AE +F+++  + D V+WN MI G            +F 
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMV-VRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + S +     L  C+    L F K +HC  +K G+        ALM  Y  C 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  AF L        +   W  +I    QN + ++A+  F  M+++    P+  T   V
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE-GVRPNHFTYSTV 414

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++   +  L+     LH   +K+       V  AL+  Y +  ++  ++ VF S    ++
Sbjct: 415 LAGKPSSLLS----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ-LGVLRHGKQIHG 593
             W+ M++  +Q +   +A+E+F  L  E   PNE +  S+++AC+     + HGKQIH 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSN----------------AAWSSMISAYGYHGKGW 637
                G      +SSALL MYS  K N                 +W+SMI+ YG HG   
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSK-KGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A+E+F  M N G+     + I +L+AC+H+GLV+EG +Y+N M+++Y +  + EH+ C+
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+  R+G   +A + I  +P    P +W  +L+AC  H + ++GK  AE L  L+P + 
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
             Y+ LSN++   G W++   + K
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRK 733



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 296/638 (46%), Gaps = 41/638 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL H   S   ++  S   Y   +  LF ET  KD+  +N ++     N      LH F
Sbjct: 38  GFLYH--QSLPFISLPSRPRY---AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLF 92

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            ++   G+  D  TL   +     +     GR VHC S+K+G + D S+    V+MY K 
Sbjct: 93  KDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKT 152

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D       F  M   + VSW +++SG   N   ++ +    +M   G   +  + ++ +
Sbjct: 153 EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    +  G  +HA+ +K G+E + +  V N+LI MY +   +  AE  F  M  +D
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTF--VCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN +I G+A  G + E F + H M+L   V+       T + LC+    L   + +H
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLA-GVKLSRTVFCTALKLCSQQRELNFTKQLH 329

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF----- 356
              ++    +   +  +LM  YSK +S+ +A  LF+     +++V+W +MI G       
Sbjct: 330 CGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNN 389

Query: 357 -KEMLYLC---------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
            K +   C         + F++ST+LA  PS            +H   +K  +       
Sbjct: 390 KKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS-------LLSQLHAQIIKAYYEKVPSVA 442

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+  Y+  G++V +  +   I    D   W+ ++    Q    ++A++ F  +  ++ 
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV-KEG 500

Query: 467 ASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             P+  T  +VI+AC +     E GK +H  A+KS       V +AL+TMY +  +I+SA
Sbjct: 501 VKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESA 560

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQL 582
             VF      ++ +WN MI+ + Q+    +ALE+F+ ++ +    ++++ + +L+ACT  
Sbjct: 561 EKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHA 620

Query: 583 GVLRHGKQ---IHGHVFHLGFQENSFISSALLDMYSNC 617
           G++  G++   I    +H+  +   +  S ++D+YS  
Sbjct: 621 GLVEEGEKYFNIMIKDYHIDKKXEHY--SCMVDLYSRA 656



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/586 (24%), Positives = 273/586 (46%), Gaps = 29/586 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +   TSL+  Y     FE    +F E   K+VV+W ++++    N      +H  
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T   ++ AL   + ++ G  VH + +K G    + +CN  + MY K 
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +E  F  M   D+V+WN ++ G     +  +    F  M  +G +       +A+
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
              +   EL++ K +H   +K GYE +    +  +L+  YS+C  ++ A + F       
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEFAQ--DIRTALMVTYSKCSSVDEAFKLFSMADAAH 371

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV+W A+I GF  N   ++A DL  +M     V P+  T  T+++    SLL      +
Sbjct: 372 NVVTWTAMIGGFVQNNNNKKAVDLFCQMS-REGVRPNHFTYSTVLAGKPSSLL----SQL 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H   I+        +  +L+D Y K+ ++ ++  +F +I P  D+V+W++M++GL     
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI-PAKDIVAWSAMLTGLAQTRD 485

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  F +++    + +  T  +++ +C +S  ++E GK IH   +K G SN     +
Sbjct: 486 SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSS 545

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G++ +A  +  R     D   WN +I    Q+G  ++A++ F+ M Q Q  
Sbjct: 546 ALLTMYSKKGNIESAEKVFTR-QEERDIVSWNSMITGYGQHGDAKKALEVFQIM-QNQGL 603

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
             D VT + V++AC +  L  EG+    + +K    +D + ++   ++ +Y R      A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYH-IDKKXEHYSCMVDLYSRAGMFDKA 662

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
             +     +  +   W  +++A   ++  E+  L   + +  +PN+
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 223/757 (29%), Positives = 376/757 (49%), Gaps = 69/757 (9%)

Query: 79  IVSALTQMNCLKQGRVVHC--LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           ++ A  ++  LKQG+ +H   LS +  +   S L +  + M+AKCG+L  +E        
Sbjct: 49  LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRF-- 106

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-SLSSAVAASACLGELSYGKV 195
           A   S   ++   + +  P+K +  F  M    E   N  +L + V A +CLG L+ G+ 
Sbjct: 107 ASVYSCTAMIRAWMEHGRPDKAMELFDRM----EVRPNCHALIALVNACSCLGNLAAGRR 162

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TCKDVVSWNAIIDGF 252
           IH+      +E++  +   N+LISMYS+CG +  A++AF  +   + +DVV+WNA+I  F
Sbjct: 163 IHSQISDRDFEENSVLG--NALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAF 220

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS--LLLREGRSVHGYAIRRLLG 310
             NG   EA  L  +M    +  P+  T V+++  C ++  L L + R++HG  +   + 
Sbjct: 221 LRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIE 280

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLF---NAIAPMNDLVSWNSMISG------------L 355
            +  +  +L+D Y K  SL  A  +F       P   LV+ ++MIS             L
Sbjct: 281 REAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRL 340

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALM 410
           F  M    ++ S  TL+++L +C+    L+ G +         ++     +N +G   L+
Sbjct: 341 FFAMNLEGTKPSGVTLVSVLNACSM---LQVGSATAFVLEQAMEVVSATRDNVLGTT-LL 396

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             Y    DL  A +    I  + D   WN +  A  Q+   +EA+  F+ M  +    P 
Sbjct: 397 TTYARSNDLPRARATFDAI-QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLE-GVRPS 454

Query: 471 SVTLVNVISACGNLELAFE---GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             T +  ++AC           GK +  L  ++ +  DT V NA + MY +C  +  A  
Sbjct: 455 VATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARA 514

Query: 528 VFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQ 581
           VFE  S    +  TWN M++A+  +     A ELF+ +E E    PN+++ V++L A T 
Sbjct: 515 VFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTS 574

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-----------KSNA------AWS 624
              +  G++IH  V   GF+ ++ I +ALL+MY+ C           KS++      AW+
Sbjct: 575 RTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWT 634

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           S+I+ Y  +G+   A++LF  M   G+RP   + IS L+AC+H G +++G +  + M  +
Sbjct: 635 SLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPD 694

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           + + P ++H  CIVD+LGR G+L EA + ++    Q     W A+L AC +  + + G++
Sbjct: 695 HGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGER 753

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            AE + +L+PE    YI L++MY A GRW +A  I K
Sbjct: 754 CAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 790



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 194/764 (25%), Positives = 335/764 (43%), Gaps = 97/764 (12%)

Query: 19  NVSYFESSLALFYETCNK------------DVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           N S+  S L + +  C               V +  AMI A +E+      +  F  M  
Sbjct: 78  NHSFLASDLIVMHAKCGNLAEAEALADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM-- 135

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
             +R +   L+ +V+A + +  L  GR +H          +S L N  ++MY+KCG L  
Sbjct: 136 -EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 194

Query: 127 SECTFSGMHCA---DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVA 182
           ++  F  +  A   D V+WN ++S  L N    + L  FR+M   G    N V+  S + 
Sbjct: 195 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLD 254

Query: 183 ASACLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +    G LS   V  IH   +  G E   +V    +L+  Y + G ++ A   F     +
Sbjct: 255 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRT--ALVDSYGKLGSLDDAWEVFLRKGDE 312

Query: 241 D----VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-------A 289
           +    +V+ +A+I     NG  +E+  L   M L    +P   T+V++++ C       A
Sbjct: 313 EPSTSLVTCSAMISACWQNGWPQESLRLFFAMNL-EGTKPSGVTLVSVLNACSMLQVGSA 371

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            + +L +   V       +LG       +L+  Y++SN L +A   F+AI    D+VSWN
Sbjct: 372 TAFVLEQAMEVVSATRDNVLG------TTLLTTYARSNDLPRARATFDAIQS-PDVVSWN 424

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS--PESLE-FGKSIHCWQ 394
           +M +             LF+ ML    + S +T +  L +C +  P++    GK I    
Sbjct: 425 AMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLL 484

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQE 453
            + G   +T   NA ++MY  CG L  A ++ +RIS    D   WN ++ A   +G  +E
Sbjct: 485 EEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKE 544

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A + F++M  ++   P+ VT V V+ A  +     +G+ +H   + +    DT +QNAL+
Sbjct: 545 AFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALL 604

Query: 514 TMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPN 568
            MY +C  +  A  +F+  S    ++  W  +I+ ++Q     RAL+LF  ++     PN
Sbjct: 605 NMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPN 664

Query: 569 EISIVSILSACTQLGVLRHG-KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
            ++ +S L+AC   G L  G + + G     G    S   S ++D+   C          
Sbjct: 665 HVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRC---------- 714

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS---LLSACSHSGLVDEGLQYYNNMLEE 684
                 G+  EA +L         R +++ VI+   LL AC +S  ++ G +    +++ 
Sbjct: 715 ------GRLDEAEKLLE-------RTSQADVITWMALLDACKNSKELERGERCAERIMQ- 760

Query: 685 YDVRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNL---PIQPKPG 724
             + PE    ++ +  M   +G+  EA    K +    I+  PG
Sbjct: 761 --LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 802



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 170/353 (48%), Gaps = 13/353 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LLT Y+  +    + A F    + DVV+WNAM  A +++      L  F  M+ EG+R
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVR 452

Query: 71  FDSTTLLIIVS---ALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
               T +  ++   A         G+ +  L  +AG+  D+++ N  +NMYAKCG L  +
Sbjct: 453 PSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADA 512

Query: 128 ECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAAS 184
              F  +  A  D ++WN++++   H+   ++    F+ M      + + V+  + + AS
Sbjct: 513 RAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAS 572

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDV 242
                ++ G+ IHA  +  G+E    +   N+L++MY++CG ++ A+  F   +   +DV
Sbjct: 573 TSRTSIAQGREIHARVVSNGFESDTVIQ--NALLNMYAKCGSLDDAQAIFDKSSSNQEDV 630

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RSVH 301
           ++W ++I G+A  G+ E A  L   MQ  + V P+  T ++ ++ C     L +G   + 
Sbjct: 631 IAWTSLIAGYAQYGQAERALKLFWTMQ-QQGVRPNHVTFISALTACNHGGKLEQGCELLS 689

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           G      +       + ++D   +   L +AE L    +   D+++W +++  
Sbjct: 690 GMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDA 741



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 141/314 (44%), Gaps = 15/314 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYE--TCNKDVVTWNAMITACVENRCVVMGLH 59
           G       + + L  Y+       + A+F       +D +TWN+M+ A   +        
Sbjct: 488 GLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFE 547

Query: 60  FFGEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F  M  E+ ++ +  T + ++ A T    + QGR +H   +  G  +D+ + N  +NMY
Sbjct: 548 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMY 607

Query: 119 AKCGDLNSSECTF--SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           AKCG L+ ++  F  S  +  D ++W ++++G       E+ L  F  M   G + ++V+
Sbjct: 608 AKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVT 667

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             SA+ A    G+L  G  + + G+   +   P     + ++ +  +CG ++ AE+    
Sbjct: 668 FISALTACNHGGKLEQGCELLS-GMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLER 726

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHE-MQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  DV++W A++D    + + E         MQL    +P++A+   +++    S+   
Sbjct: 727 TSQADVITWMALLDACKNSKELERGERCAERIMQL----DPEVASSYIVLA----SMYAA 778

Query: 296 EGRSVHGYAIRRLL 309
            GR      IR+ +
Sbjct: 779 AGRWNEAATIRKTM 792


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 214/662 (32%), Positives = 343/662 (51%), Gaps = 78/662 (11%)

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           +  M  +G   DN +  + + A+A + +L+ GK +HA   K G   +   +V NSL++MY
Sbjct: 73  YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG--QALPTAVPNSLVNMY 130

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
            +CGDI+AA R F  +T +D VSWN++I+      ++E A  L   M L+ +V P   T+
Sbjct: 131 GKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLM-LLENVGPTSFTL 189

Query: 282 VTLISLCAD---SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
           V++   C++    LLL  G+ VH + +R    +     N+L+  Y+K   + +A+ LF+ 
Sbjct: 190 VSVAHACSNLINGLLL--GKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDV 246

Query: 339 IAPMNDLVSWNSMISGL-----FKE-MLYLCSQFSFS------TLLAILPSCNSPESLEF 386
                DLVSWN++IS L     F+E +LYL             TL ++LP+C+  E L  
Sbjct: 247 FDD-KDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 387 GKSIHCWQLKLG--FSNNTIGVNALMHMYINC-----GDLVAAFSLLQRISHNSDTSCWN 439
           GK IH + L       N+ +G  AL+ MY NC     G LV  F  + R +     + WN
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGC-ALVDMYCNCKQPEKGRLV--FDGMFRRT----IAVWN 358

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    +N    EAI+ F  M  +   SP+SVTL +V+ AC   E   + + +H   +K
Sbjct: 359 AMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVK 418

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF------------ 547
                D  VQNAL+ MY R   I+ A ++F S    ++ +WN MI+ +            
Sbjct: 419 WGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNL 478

Query: 548 ----SQNKAEVRA-----LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
                + +AE R       E  ++   +PN ++++++L  C  L  L  GK+IH +    
Sbjct: 479 LHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ 538

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
              ++  + SAL+DMY+ C               ++   W+ +I AYG HGKG EA++LF
Sbjct: 539 MLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLF 598

Query: 644 HEMCNSG-----IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
             M   G     IRP + + I++ ++ SHSG+VDEGL  +  M  ++ + P ++H+ C+V
Sbjct: 599 RRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLV 658

Query: 699 DMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           D+LGRSG+++EAY  IK +P    K   W ++L AC  H + ++G+  A+ LF L+P  +
Sbjct: 659 DLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVL 718

Query: 758 GY 759
            Y
Sbjct: 719 DY 720



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 288/634 (45%), Gaps = 70/634 (11%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  MV  G+  D+     ++ A   +  L  G+ +H    K G    +++ N  VNMY K
Sbjct: 73  YTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGK 132

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL-SS 179
           CGD++++   F  +   D VSWN++++        E  +  FR M        + +L S 
Sbjct: 133 CGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSV 192

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A A S  +  L  GK +HA  ++ G          N+L++MY++ G +  A+  F     
Sbjct: 193 AHACSNLINGLLLGKQVHAFVLRNG---DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDD 249

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD+VSWN II   + N +FEEA   LH M L   V P+  T+ +++  C+   +L  G+ 
Sbjct: 250 KDLVSWNTIISSLSQNDRFEEALLYLHVM-LQSGVRPNGVTLASVLPACSHLEMLGCGKE 308

Query: 300 VHGYAIRRLLGYDLLMMN----SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           +H +    L+  DL+  +    +L+D Y       K  L+F+ +     +  WN+MI+G 
Sbjct: 309 IHAFV---LMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMF-RRTIAVWNAMIAGY 364

Query: 355 -----------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                      LF EM++ L    +  TL ++LP+C   ES    + IH   +K GF  +
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKD 424

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI---VAC------------TQ 447
               NALM MY   G +  A S+   ++   D   WN +I   V C             Q
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNR-KDIVSWNTMITGYVVCGRHDDALNLLHDMQ 483

Query: 448 NGHFQEAIKTFKSMTQQQN--ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            G  +  I TF      +N    P+SVTL+ V+  C  L    +GK +H  A+K ++  D
Sbjct: 484 RGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKD 543

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-- 563
             V +AL+ MY +C  +  + TVFE     N+ TWN +I A+  +     AL+LFR +  
Sbjct: 544 VAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVE 603

Query: 564 ------EFEPNEISIVSILSACTQLGVLRHGKQI-HGHVFHLGFQENSFISSALLD---- 612
                 E  PNE++ ++I ++ +  G++  G  + +      G +  S   + L+D    
Sbjct: 604 EGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGR 663

Query: 613 -------------MYSNCKSNAAWSSMISAYGYH 633
                        M SN K   AWSS++ A   H
Sbjct: 664 SGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH 697



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 269/570 (47%), Gaps = 48/570 (8%)

Query: 3   FLAHLPTST--SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           F   LPT+   SL+  Y      +++  +F E  N+D V+WN+MI A        + +H 
Sbjct: 114 FGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHL 173

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+ E +   S TL+ +  A + + N L  G+ VH   ++ G    +   N  V MYA
Sbjct: 174 FRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWR-TFTNNALVTMYA 232

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G +  ++  F      D VSWNTI+S    N+  E+ LLY   M  SG + + V+L+S
Sbjct: 233 KLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLAS 292

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + L  L  GK IHA  + +  +      V  +L+ MY  C   E     F GM  
Sbjct: 293 VLPACSHLEMLGCGKEIHAF-VLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR 351

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREG 297
           + +  WNA+I G+  N    EA +L  EM     + P+  T+ +++  C   +S L +EG
Sbjct: 352 RTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEG 411

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
             +H   ++     D  + N+LMD YS+   +  A  +F ++    D+VSWN+MI+G   
Sbjct: 412 --IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNTMITGYVV 468

Query: 355 ---------LFKEMLYLCSQFSFS------------------TLLAILPSCNSPESLEFG 387
                    L  +M    ++   +                  TL+ +LP C +  +L  G
Sbjct: 469 CGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K IH + +K   S +    +AL+ MY  CG L  + ++ +++S   +   WN++I+A   
Sbjct: 529 KEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMS-VRNVITWNVLIMAYGM 587

Query: 448 NGHFQEAIKTFKSMTQQ----QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           +G  +EA+K F+ M ++    +   P+ VT + + ++  +  +  EG +L    +K+  G
Sbjct: 588 HGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLF-YTMKAKHG 646

Query: 504 LDTRVQN--ALITMYGRCRDIKSASTVFES 531
           ++    +   L+ + GR   I+ A  + ++
Sbjct: 647 IEPTSDHYACLVDLLGRSGQIEEAYNLIKT 676



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 30/285 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA---CVENRCVVMGL 58
           GF        +L+  YS +   E + ++F     KD+V+WN MIT    C  +   +  L
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479

Query: 59  HFFGEMVEE---------------GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG 103
           H       E                ++ +S TL+ ++     +  L +G+ +H  ++K  
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM 539

Query: 104 MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR 163
           +  D ++ +  V+MYAKCG LN S   F  M   + ++WN ++     +   E+ L  FR
Sbjct: 540 LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFR 599

Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVI-------HALGIKLGYEDSPYVSVTNS 216
            M   G+    +   + V   A    LS+  ++       + +  K G E  P       
Sbjct: 600 RMVEEGDNNREIR-PNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIE--PTSDHYAC 656

Query: 217 LISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFE 259
           L+ +  + G IE A      M    K V +W++++    ++   E
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLE 701


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 199/684 (29%), Positives = 332/684 (48%), Gaps = 44/684 (6%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D   +N ++     NN+  + L  F+++  SG   D ++LS A+     L + 
Sbjct: 61  FDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQ 120

Query: 191 SYGKVIHALGIKLGY-EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             G+ +H   +K G+ ED   VSV  SL+ MY +  D E     F  M  K+VVSW +++
Sbjct: 121 VVGRQVHCQSLKSGFLED---VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLL 177

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+A NG  +E   L+++MQ M  V P+  T  T++   AD  ++  G  VH   ++   
Sbjct: 178 SGYARNGLNDEVIHLINQMQ-MEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            +   + N+L+  Y KS  +  AE +F+++  + D V+WN MI G            +F 
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMV-VRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + S +     L  C+    L F K +HC  +K G+        ALM  Y  C 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  AF L        +   W  +I    QN + ++A+  F  M+++    P+  T   V
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE-GVRPNHFTYSTV 414

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++   +  L+     LH   +K+       V  AL+  Y +  ++  ++ VF S    ++
Sbjct: 415 LAGKPSSLLS----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDI 470

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ-LGVLRHGKQIHG 593
             W+ M++  +Q +   +A+E+F  L  E   PNE +  S+++AC+     + HGKQIH 
Sbjct: 471 VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHA 530

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSN----------------AAWSSMISAYGYHGKGW 637
                G      +SSALL MYS  K N                 +W+SMI+ YG HG   
Sbjct: 531 TAVKSGKSNALCVSSALLTMYSK-KGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A+E+F  M N G+     + I +L+AC+H+GLV+EG +Y+N M+++Y +  + EH+ C+
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+  R+G   +A + I  +P    P +W  +L+AC  H + ++GK  AE L  L+P + 
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
             Y+ LSN++   G W++   + K
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRK 733



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/608 (26%), Positives = 282/608 (46%), Gaps = 36/608 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL H   S   ++  S   Y   +  LF ET  KD+  +N ++     N      LH F
Sbjct: 38  GFLYH--QSLPFISLPSRPRY---AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLF 92

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            ++   G+  D  TL   +     +     GR VHC S+K+G + D S+    V+MY K 
Sbjct: 93  KDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKT 152

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D       F  M   + VSW +++SG   N   ++ +    +M   G   +  + ++ +
Sbjct: 153 EDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    +  G  +HA+ +K G+E + +  V N+LI MY +   +  AE  F  M  +D
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTTF--VCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WN +I G+A  G + E F + H M+L   V+       T + LC+    L   + +H
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLA-GVKLSRTVFCTALKLCSQQRELNFTKQLH 329

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF----- 356
              ++    +   +  +LM  YSK +S+ +A  LF+     +++V+W +MI G       
Sbjct: 330 CGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNN 389

Query: 357 -KEMLYLC---------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
            K +   C         + F++ST+LA  PS            +H   +K  +       
Sbjct: 390 EKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS-------LLSQLHAQIIKAYYEKVPSVA 442

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+  Y+  G++V +  +   I    D   W+ ++    Q    ++A++ F  +  ++ 
Sbjct: 443 TALLDAYVKTGNVVESARVFYSIP-AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLV-KEG 500

Query: 467 ASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             P+  T  +VI+AC +     E GK +H  A+KS       V +AL+TMY +  +I+SA
Sbjct: 501 VKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESA 560

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             VF      ++ +WN MI+ + Q+    +ALE+F+ ++      ++++ + +L+ACT  
Sbjct: 561 EKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHA 620

Query: 583 GVLRHGKQ 590
           G++  G++
Sbjct: 621 GLVEEGEK 628



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 274/586 (46%), Gaps = 29/586 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +   TSL+  Y     FE    +F E   K+VV+W ++++    N      +H  
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T   ++ AL   + ++ G  VH + +K G    + +CN  + MY K 
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +E  F  M   D+V+WN ++ G     +  +    F  M  +G +       +A+
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
              +   EL++ K +H   +K GYE +    +  +L+  YS+C  ++ A + F       
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEFAQ--DIRTALMVTYSKCSSVDEAFKLFSMADAAH 371

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VV+W A+I GF  N   E+A DL  +M     V P+  T  T+++    SLL      +
Sbjct: 372 NVVTWTAMIGGFVQNNNNEKAVDLFCQMS-REGVRPNHFTYSTVLAGKPSSLL----SQL 426

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H   I+        +  +L+D Y K+ ++ ++  +F +I P  D+V+W++M++GL     
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI-PAKDIVAWSAMLTGLAQTRD 485

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  F +++    + +  T  +++ +C +S  ++E GK IH   +K G SN     +
Sbjct: 486 SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSS 545

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G++ +A  +  R     D   WN +I    Q+G  ++A++ F+ M Q Q  
Sbjct: 546 ALLTMYSKKGNIESAEKVFTR-QEERDIVSWNSMITGYGQHGDAKKALEVFQIM-QNQGL 603

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
             D VT + V++AC +  L  EG+    + +K    +D ++++   ++ +Y R      A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYH-IDKKIEHYSCMVDLYSRAGMFDKA 662

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE 569
             +     +  +   W  +++A   ++  E+  L   + +  +PN+
Sbjct: 663 MDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPND 708


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 199/633 (31%), Positives = 320/633 (50%), Gaps = 53/633 (8%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ +HA  +  G   S    + NSLI++Y++C     A   F  +  KDVVSWN +
Sbjct: 25  QLRKGRALHARILVTGSFSS--TQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCL 82

Query: 249 IDGFALNGKFEEAFDLLHEMQLM----RSVEPDIAT---VVTLISLCADSLLLREGRSVH 301
           I+ F+       +  ++H  + +    +++ P+  T   V T  S  +DS   R GR  H
Sbjct: 83  INAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDS---RAGRQAH 139

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             A++    +D+   +SL++ Y K+  + +A  LF+ + P  + VSW +MISG       
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEM-PERNAVSWATMISGYASQELA 198

Query: 355 -----LFKEMLYLC-----SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                LFK M +       ++F F+++L+ L +C     +  G+ +H   +K G      
Sbjct: 199 DEAFELFKLMRHEEKGKNENEFVFTSVLSAL-TCYML--VNTGRQVHSLAMKNGLVCIVS 255

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL+ MY+ CG L  A    + +S N ++  W+ ++    Q G   +A+K F  M  Q
Sbjct: 256 VANALVTMYVKCGSLEDALKTFE-LSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM-HQ 313

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
               P   TLV VI+AC +     EG+ +HG +LK    L   V +AL+ MY +C  I  
Sbjct: 314 SGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVD 373

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ 581
           A   FE     ++  W  +I+ + QN     AL L+  ++     PN++++ S+L AC+ 
Sbjct: 374 ARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSN 433

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           L  L  GKQ+H  +    F     I SAL  MY+ C               +   +W++M
Sbjct: 434 LAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAM 493

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           IS    +G+G E +ELF +MC  G +P   + ++LLSACSH GLVD G  Y+  M +E++
Sbjct: 494 ISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFN 553

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P  EH+ C+VD+L R+GKL EA EFI++  +     +W  +L+A  +H D  +G    
Sbjct: 554 IAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAG 613

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           E L +L       Y+ LS++Y ALG+W+D   +
Sbjct: 614 EKLMELGSLESSAYVLLSSIYTALGKWEDVERV 646



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 277/565 (49%), Gaps = 31/565 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH---FFGEMV- 65
           + SL+  Y+  S+F  +  +F    NKDVV+WN +I A  + +     LH    F ++V 
Sbjct: 48  ANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVM 107

Query: 66  -EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             + I  ++ TL  + +A + ++  + GR  H L++K     D    +  +NMY K G +
Sbjct: 108 AHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLV 167

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW--SGEQADNVSLSSAVA 182
             +   F  M   + VSW T++SG       ++    F+ M     G+  +    +S ++
Sbjct: 168 FEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLS 227

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A  C   ++ G+ +H+L +K G      VSV N+L++MY +CG +E A + F     K+ 
Sbjct: 228 ALTCYMLVNTGRQVHSLAMKNGL--VCIVSVANALVTMYVKCGSLEDALKTFELSGNKNS 285

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           ++W+A++ GFA  G  ++A  L ++M     + P   T+V +I+ C+D+  + EGR +HG
Sbjct: 286 ITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL-PSEFTLVGVINACSDACAIVEGRQMHG 344

Query: 303 YAIRRLLGYDLLM--MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           Y+++  LGY+L +  +++L+D Y+K  S+  A   F  I    D+V W S+I+G      
Sbjct: 345 YSLK--LGYELQLYVLSALVDMYAKCGSIVDARKGFECIQ-QPDVVLWTSIITGYVQNGD 401

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
           ++  L L  +           T+ ++L +C++  +L+ GK +H   +K  FS      +A
Sbjct: 402 YEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSA 461

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L  MY  CG L   + +  R+    D   WN +I   +QNG   E ++ F+ M   +   
Sbjct: 462 LSAMYAKCGSLDDGYRIFWRMPAR-DVISWNAMISGLSQNGRGNEGLELFEKMC-LEGTK 519

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKSAST 527
           PD+VT VN++SAC ++ L   G     +         T    A ++ +  R   +  A  
Sbjct: 520 PDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKE 579

Query: 528 VFESC-YNCNLCTWNCMISAFSQNK 551
             ES   +  LC W  +++A   ++
Sbjct: 580 FIESATVDHGLCLWRILLAASKNHR 604



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 254/534 (47%), Gaps = 42/534 (7%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T+   L++GR +H   +  G  + + + N  +N+YAKC   + +   F  ++  D VSWN
Sbjct: 21  TRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWN 80

Query: 144 TIMSGCLHNNYPEK--------CLLYFREMGWSGEQ--ADNVSLSSAVAASACLGELSYG 193
                CL N + ++         +  FR++  + +    +  +L+    A++ L +   G
Sbjct: 81  -----CLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           +  HAL +K     S  V   +SL++MY + G +  A   F  M  ++ VSW  +I G+A
Sbjct: 136 RQAHALAVKTAC--SHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYA 193

Query: 254 LNGKFEEAFDLLHEMQLMRSVEP----DIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                +EAF+L    +LMR  E     +     +++S     +L+  GR VH  A++  L
Sbjct: 194 SQELADEAFELF---KLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGL 250

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
              + + N+L+  Y K  SL  A   F      N  ++W++M++G            LF 
Sbjct: 251 VCIVSVANALVTMYVKCGSLEDALKTFELSGNKNS-ITWSAMVTGFAQFGDSDKALKLFY 309

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M       S  TL+ ++ +C+   ++  G+ +H + LKLG+      ++AL+ MY  CG
Sbjct: 310 DMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCG 369

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +V A    + I    D   W  +I    QNG ++ A+  +  M Q     P+ +T+ +V
Sbjct: 370 SIVDARKGFECI-QQPDVVLWTSIITGYVQNGDYEGALNLYGKM-QLGGVIPNDLTMASV 427

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC NL    +GK +H   +K    L+  + +AL  MY +C  +     +F      ++
Sbjct: 428 LKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDV 487

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
            +WN MIS  SQN      LELF  +  E   P+ ++ V++LSAC+ +G++  G
Sbjct: 488 ISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG 541



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  + +L+T Y      E +L  F  + NK+ +TW+AM+T   +       L  F
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLF 308

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + G      TL+ +++A +    + +GR +H  S+K G      + +  V+MYAKC
Sbjct: 309 YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC 368

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   D V W +I++G + N   E  L  + +M   G   ++++++S +
Sbjct: 369 GSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVL 428

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK +HA  IK  Y  S  + + ++L +MY++CG ++   R FW M  +D
Sbjct: 429 KACSNLAALDQGKQMHAGIIK--YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARD 486

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWNA+I G + NG+  E  +L  +M L    +PD  T V L+S C+   L+  G
Sbjct: 487 VISWNAMISGLSQNGRGNEGLELFEKMCL-EGTKPDNVTFVNLLSACSHMGLVDRG 541



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 183/394 (46%), Gaps = 31/394 (7%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +L  L  C   + L  G+++H   L  G  ++T   N+L+++Y  C     A  +   I+
Sbjct: 13  VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN 72

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ----QQNASPDSVTLVNVISACGNLEL 486
            N D   WN +I A +Q      ++       Q     +   P++ TL  V +A   L  
Sbjct: 73  -NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSD 131

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           +  G+  H LA+K+    D    ++L+ MY +   +  A  +F+     N  +W  MIS 
Sbjct: 132 SRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISG 191

Query: 547 FSQNKAEVRALELFRHLEFE-----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           ++  +    A ELF+ +  E      NE    S+LSA T   ++  G+Q+H      G  
Sbjct: 192 YASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLV 251

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
               +++AL+ MY  C               K++  WS+M++ +   G   +A++LF++M
Sbjct: 252 CIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDM 311

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRS 704
             SG  P++ +++ +++ACS +  + EG Q +   L+   +  E + +V   +VDM  + 
Sbjct: 312 HQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLK---LGYELQLYVLSALVDMYAKC 368

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           G + +A +  + +  QP   +W ++++    +GD
Sbjct: 369 GSIVDARKGFECIQ-QPDVVLWTSIITGYVQNGD 401



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +P  ++L   Y+     +    +F+    +DV++WNAMI+   +N     GL  F 
Sbjct: 452 FSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFE 511

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +M  EG + D+ T + ++SA + M  + +G V
Sbjct: 512 KMCLEGTKPDNVTFVNLLSACSHMGLVDRGWV 543


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 216/811 (26%), Positives = 392/811 (48%), Gaps = 61/811 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IR 70
           +++  Y        + A+F     +++V+WNA+I A  +N      +  F  M  +G +R
Sbjct: 166 AIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVR 225

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T + +V A + +  L +G+  H   I+ G  +   + N  VNMY KCG ++ +   
Sbjct: 226 PNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLV 285

Query: 131 FSGMHCADTVS---WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           F  M   D +S   W  I++   HN +  +  + F +M   G   + V+  + + A   L
Sbjct: 286 FEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTL 345

Query: 188 G--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVS 244
              E  + +V H LG++L        ++  + +S +++ GD+ AA   F  + + ++VVS
Sbjct: 346 AQCEKIFARVKH-LGLELD------TTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVS 398

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  +I  +A  G    AFDL   M      EP+  T + ++  C     L     +H + 
Sbjct: 399 WTVMIWAYAQQGFIRAAFDLYKRM----DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHM 454

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           +      D+++   L+  Y K  S+  A  +F  +   + +V+WNSM+S           
Sbjct: 455 VASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERS-VVAWNSMLSAFASNGCYERS 513

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L++ ML   ++    T LA+L +C S    E  +    ++L+L  +     V+A    
Sbjct: 514 LKLYERMLLEGTKPDKITYLAVLDACQSVS--EARRYAATFELELDIAARNAAVSA---- 567

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A +    I   ++   WN +I    Q+G  ++A++ F  M + +    +SV
Sbjct: 568 YARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKM-ELEGVRANSV 626

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T +  + AC +L+    G+ LH   L   +  +  + NA+I MYG+C  +  A   F   
Sbjct: 627 TYLASLEACSSLKDLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEAMDEFVKM 685

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              ++ +WN MI+ ++Q+ +  +ALE F+ ++ E   P+  + +  + AC  +  L  GK
Sbjct: 686 PERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGK 745

Query: 590 QIHGHVFHLG--FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
            IH  V       +++  +++AL+ MY+ C               ++   WS++I+A   
Sbjct: 746 TIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQ 805

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV-DEGLQYYNNMLEEYDVRPET 691
           HG+  EA++LF EM   G +P   +  +L++ACS  G+V D G + ++ +   Y V    
Sbjct: 806 HGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASA 865

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+V++LGR+GKL+EA   I+ +P +    +W A+L+AC+  GD + G + A    +
Sbjct: 866 EHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQ 925

Query: 752 LEPENVGYYIS-LSNMYVALGRWKDAVEIGK 781
           L+P +    ++ L+ +Y A GRW+DA  + K
Sbjct: 926 LDPGSFAASMAMLAELYGAAGRWEDAARVRK 956



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 198/763 (25%), Positives = 354/763 (46%), Gaps = 60/763 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+     + ++ +F      +V +W A+ITA  +   +   L FF +M  +G + D
Sbjct: 67  LIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPD 126

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +     +++A +    L +G+ +H   + AGM     + N  VN+Y KCG ++ ++  F 
Sbjct: 127 AFVFSTVLTACSSAGALNEGKAIHDCVVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFE 185

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS 191
            +   + VSWN +++    N + +  +  F+ M   G  + ++ +  S V A + L +L 
Sbjct: 186 RLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLP 245

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV---SWNAI 248
            GK  H   I+ G++   Y+ V NSL++MY +CG ++ A   F  M  +DV+   SW  I
Sbjct: 246 RGKSTHERIIRTGFDS--YLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVI 303

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  FA NG   EAF L ++M L   V P+  T VT++  C     L +   +        
Sbjct: 304 IAAFAHNGHLLEAFVLFYKMDL-EGVLPNKVTFVTVLRACT---TLAQCEKIFARVKHLG 359

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLC 363
           L  D  +  + +  ++K   L+ A  +F  +    ++VSW  MI      G  +    L 
Sbjct: 360 LELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLY 419

Query: 364 SQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            +        T +A++ SC  PE L   + IH   +  GF ++ +    L+ MY  CG +
Sbjct: 420 KRMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSV 479

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +A+S+ + +   S  + WN ++ A   NG ++ ++K ++ M   +   PD +T + V+ 
Sbjct: 480 DSAWSIFENLKERSVVA-WNSMLSAFASNGCYERSLKLYERML-LEGTKPDKITYLAVLD 537

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLC 538
           AC ++  A         A    + LD   +NA ++ Y RC  +K A   F++  +  N  
Sbjct: 538 ACQSVSEA------RRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAV 591

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TWN MIS  +Q+    +ALE F  +E E    N ++ ++ L AC+ L  L  G+Q+H  +
Sbjct: 592 TWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARI 651

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
                 E + +S+A+++MY  C               +   +W++MI+ Y  HG G +A+
Sbjct: 652 LLENIHEAN-LSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQAL 710

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD-VRPETEHHVCIVD 699
           E F +M   G  P +++ +  + AC     +  G   ++ +      +  +      +V 
Sbjct: 711 EFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVT 770

Query: 700 MLGRSGKLQEAYEFI-----KNLPIQPKPGVWGAMLSACSHHG 737
           M  R G L +A         +NL        W  +++AC+ HG
Sbjct: 771 MYARCGSLHDAKSVFWRSHSRNLV------TWSNLIAACAQHG 807



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 191/703 (27%), Positives = 329/703 (46%), Gaps = 67/703 (9%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G++VH   + +G   +  L N  + MYAKCG L  +   F  + C +  SW  +++    
Sbjct: 45  GKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAK 104

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +  + L +FR+M   G + D    S+ + A +  G L+ GK IH   +  G E     
Sbjct: 105 EGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQ--- 161

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V N+++++Y +CG +  A+  F  +  +++VSWNA+I   A NG  ++A  +   M L 
Sbjct: 162 VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLD 221

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            SV P+ AT V+++  C++ L L  G+S H   IR      L + NSL++ Y K  S+  
Sbjct: 222 GSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDH 281

Query: 332 AELLFNAIAPMNDLV---SWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILP 376
           A L+F  +  + D++   SW  +I+     G   E   L  +           T + +L 
Sbjct: 282 ARLVFEKM-RLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLR 340

Query: 377 SCNSPESLE--FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +C +    E  F +  H     LG   +T    A +  +   GDL AA  + + +  + +
Sbjct: 341 ACTTLAQCEKIFARVKH-----LGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRN 395

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              W ++I A  Q G  + A   +K M    +  P++VT + V+ +C   E     + +H
Sbjct: 396 VVSWTVMIWAYAQQGFIRAAFDLYKRM----DCEPNAVTFMAVMDSCLRPEDLPRAEQIH 451

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              + S    D  +Q  L+TMYG+C  + SA ++FE+    ++  WN M+SAF+ N    
Sbjct: 452 AHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYE 511

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           R+L+L+  +  E   P++I+ +++L AC  +   R     +   F L  + +    +A +
Sbjct: 512 RSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARR----YAATFEL--ELDIAARNAAV 565

Query: 612 DMYSNC---------------KSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
             Y+ C               K+NA  W++MIS    HG+  +A+E F +M   G+R   
Sbjct: 566 SAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANS 625

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY-EFI 714
            + ++ L ACS    +  G Q +  +L E     E      +++M G+ G L EA  EF+
Sbjct: 626 VTYLASLEACSSLKDLTRGRQLHARILLENI--HEANLSNAVINMYGKCGSLDEAMDEFV 683

Query: 715 KNLPIQPKPGV--WGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           K     P+  V  W  M++  + HG    G+Q  E   +++ E
Sbjct: 684 K----MPERDVISWNTMIATYAQHGS---GRQALEFFKQMDLE 719



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/543 (27%), Positives = 260/543 (47%), Gaps = 64/543 (11%)

Query: 266 HEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           H  QL +S E    A   +L+  CA+      G+ VH + +    G +  + N L+  Y+
Sbjct: 13  HINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYA 72

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQ---FSFS 369
           K   L  A  +F  + P  ++ SW ++I+            G F++M    ++   F FS
Sbjct: 73  KCGCLQDAVEVFE-LLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFS 131

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T   +L +C+S  +L  GK+IH   +  G     +G NA++++Y  CG +  A ++ +R+
Sbjct: 132 T---VLTACSSAGALNEGKAIHDCVVLAGMETQVVG-NAIVNLYGKCGRVHEAKAVFERL 187

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +  S WN +I A  QNGH ++A++ F+ M    +  P+  T V+V+ AC NL     
Sbjct: 188 PERNLVS-WNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPR 246

Query: 490 GKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLC---TWNCMI 544
           GKS H   +++  G D+   V N+L+ MYG+C  +  A  VFE     ++    +W  +I
Sbjct: 247 GKSTHERIIRT--GFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVII 304

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +AF+ N   + A  LF  ++ E   PN+++ V++L ACT L      ++I   V HLG +
Sbjct: 305 AAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLA---QCEKIFARVKHLGLE 361

Query: 602 ENSFISSALL-------------DMYSNCKSN---AAWSSMISAYGYHGKGWEAIELFHE 645
            ++ + +A +             D++ N  S+    +W+ MI AY   G    A +L+  
Sbjct: 362 LDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKR 421

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLG 702
           M      P   + ++++ +C     +    Q + +M+    E DV  +    VC+V M G
Sbjct: 422 M---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQ----VCLVTMYG 474

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE--LLFKLEPENVGYY 760
           + G +  A+   +NL  +     W +MLSA + +G  +   ++ E  LL   +P+ + Y 
Sbjct: 475 KCGSVDSAWSIFENLK-ERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYL 533

Query: 761 ISL 763
             L
Sbjct: 534 AVL 536



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 222/482 (46%), Gaps = 34/482 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +     L+T Y      +S+ ++F     + VV WN+M++A   N C    L  +
Sbjct: 458 GFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLY 517

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG + D  T L ++ A   ++  ++      L +      D +  N  V+ YA+C
Sbjct: 518 ERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELEL------DIAARNAAVSAYARC 571

Query: 122 GDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G L  ++  F  +    + V+WN ++SG   +   ++ L  F +M   G +A++V+  ++
Sbjct: 572 GSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLAS 631

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + L +L+ G+ +HA   ++  E+    +++N++I+MY +CG ++ A   F  M  +
Sbjct: 632 LEACSSLKDLTRGRQLHA---RILLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPER 688

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV+SWN +I  +A +G   +A +   +M L     PD AT +  I  C     L  G+++
Sbjct: 689 DVISWNTMIATYAQHGSGRQALEFFKQMDL-EGWTPDRATYLGAIDACGSVPSLALGKTI 747

Query: 301 HGYAIRRL--LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           H         L  D  +  +L+  Y++  SL  A+ +F      N LV+W+++I+     
Sbjct: 748 HSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRN-LVTWSNLIAACAQH 806

Query: 355 --------LFKEMLYLCSQ---FSFSTLLAILPSCNSPESLEFG--KSIHCWQLKLGFSN 401
                   LF+EM    ++    +FSTL+A   +C+    ++ G  +           S 
Sbjct: 807 GRENEALDLFREMQLQGTKPDALTFSTLVA---ACSRRGVVKDGGRRIFDALGRVYPVSA 863

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +      ++ +    G L  A  L+Q +   +  + W  ++ AC + G  +  I+     
Sbjct: 864 SAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLERGIRAANRA 923

Query: 462 TQ 463
            Q
Sbjct: 924 QQ 925



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 148/309 (47%), Gaps = 31/309 (10%)

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           +++T  +  ++ + S       +++  C   + A  GK +H   L S  G++  +QN LI
Sbjct: 9   SLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLI 68

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEI 570
            MY +C  ++ A  VFE     N+ +W  +I+A+++       L  FR ++ +   P+  
Sbjct: 69  FMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAF 128

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
              ++L+AC+  G L  GK IH  V   G  E   + +A++++Y  C             
Sbjct: 129 VFSTVLTACSSAGALNEGKAIHDCVVLAGM-ETQVVGNAIVNLYGKCGRVHEAKAVFERL 187

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEG 674
             ++  +W+++I+A   +G   +A+++F  M  +  +RP  ++ +S++ ACS+   +  G
Sbjct: 188 PERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRG 247

Query: 675 LQYYNNMLEEYDVRPETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQPKPGV--WGA 728
              +  +     +R   + ++     +V+M G+ G +  A    + + ++    V  W  
Sbjct: 248 KSTHERI-----IRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTV 302

Query: 729 MLSACSHHG 737
           +++A +H+G
Sbjct: 303 IIAAFAHNG 311



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 11/188 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T+L+T Y+       + ++F+ + ++++VTW+ +I AC ++      L  F EM  +G
Sbjct: 764 VATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQG 823

Query: 69  IRFDSTTLLIIVSALTQMNCLKQG--RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            + D+ T   +V+A ++   +K G  R+   L     + A +      V +  + G L  
Sbjct: 824 TKPDALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEE 883

Query: 127 SECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +E    GM   A    W  +++ C      E+ +        +  +A  +   S  A+ A
Sbjct: 884 AEGLIQGMPRKASGAIWMALLAACNRRGDLERGIR-------AANRAQQLDPGSFAASMA 936

Query: 186 CLGELSYG 193
            L EL YG
Sbjct: 937 MLAEL-YG 943


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 309/600 (51%), Gaps = 37/600 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           +S +  L+S+Y   G ++ A   F  +   D +SW  II  + LN +F +     + M++
Sbjct: 37  LSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRV 96

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
               E D      ++  C++S    EGR VH   I +    D  +   L+D Y+K   + 
Sbjct: 97  CLK-ECDNVVFSHVLKACSESRNFDEGRKVHC-QIVKFGNPDSFVFTGLVDMYAKCGEIE 154

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            +  +F+     N + SW+SMI+G            LF  M     + +  TL  ++ +C
Sbjct: 155 CSRSVFDENLDRN-VFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHAC 213

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               +L  GK +H + +K G    +  V AL+ +Y  CG +  A S+   + H  D   W
Sbjct: 214 KKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDEL-HGIDIVSW 272

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +IV  TQNG  +EA+K F    +Q    P+ VT+ +V S+C  L     G+S+HGL++
Sbjct: 273 TAMIVGYTQNGCPEEALKLFLQ-KEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSI 331

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K L   D  V N+L+  Y +C+  + A  VFE+  + ++  WN +ISAFSQN +   ALE
Sbjct: 332 K-LGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALE 390

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF-QENSFISSALLDMY 614
           LF  +      P+ +++VS+LSAC  L  L+ G   H +    G    N ++ +ALL  Y
Sbjct: 391 LFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFY 450

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               KS   WS+MIS YG  G G  ++ +F +M  + ++P +    
Sbjct: 451 AKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFT 510

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+LSACSH+G++ EG + +  + ++Y++ P T+H+ C+VD+L R+G+L+EA +FI+ +P+
Sbjct: 511 SILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPV 570

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           QP   ++GA L  C  H    +G+   + + +L P +  YY+ + N+Y +  RW    ++
Sbjct: 571 QPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQV 630



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 172/650 (26%), Positives = 300/650 (46%), Gaps = 49/650 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +  G+  D S     V++Y   G L+ +   F  +   D +SW  I+     N+ 
Sbjct: 24  MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               + ++  M    ++ DNV  S  + A +       G+ +H   +K G  DS    V 
Sbjct: 84  FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDS---FVF 140

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
             L+ MY++CG+IE +   F     ++V SW+++I G+  N   ++   L + M+    +
Sbjct: 141 TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMR-EELI 199

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E +  T+  L+  C     L +G+ +HGY I+  +     ++ +L+D Y+K   +  A  
Sbjct: 200 EANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARS 259

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ +  + D+VSW +MI G            LF +   +    +  T+ ++  SC+   
Sbjct: 260 VFDELHGI-DIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLL 318

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +L  G+SIH   +KLG S + I  N+L+  Y  C     A  + + IS + D   WN +I
Sbjct: 319 NLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETIS-DRDVVAWNSII 376

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SL 501
            A +QNG   EA++ F  M +  +  PD+VTLV+V+SAC +L     G S H  A+K  L
Sbjct: 377 SAFSQNGSAYEALELFHQM-RMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGL 435

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  +  V  AL+T Y +C D +SA  +F+     +  TW+ MIS +        +L +F 
Sbjct: 436 LSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFG 495

Query: 562 HL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +   E +PNE    SILSAC+  G++  G ++    F +  Q+           Y+   
Sbjct: 496 DMLKAELKPNEEIFTSILSACSHTGMIGEGWRL----FTMICQD-----------YNLVP 540

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           S   ++ M+      G+  EA++   +M    ++P  S   + L  C      D G    
Sbjct: 541 STKHYTCMVDLLARAGRLKEALDFIQKM---PVQPDVSLFGAFLHGCGLHSRFDLGELAI 597

Query: 679 NNMLEEYDVRP-ETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQPKPG 724
             MLE   + P +  ++V + ++     R  K+++  E +K   +   PG
Sbjct: 598 KRMLE---LHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPG 644



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 229/472 (48%), Gaps = 29/472 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L+  Y+     E S ++F E  +++V +W++MI   V+N     GL  F  M EE I 
Sbjct: 141 TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIE 200

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL I+V A  ++  L QG+ +H   IK G+   S L    +++YAKCG +  +   
Sbjct: 201 ANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSV 260

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +H  D VSW  ++ G   N  PE+ L  F +        ++V+++S  ++ + L  L
Sbjct: 261 FDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNL 320

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + G+ IH L IKLG  D     VTNSL+  Y++C     A   F  ++ +DVV+WN+II 
Sbjct: 321 NLGRSIHGLSIKLGSRDPI---VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIIS 377

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LL 309
            F+ NG   EA +L H+M+ M SV PD  T+V+++S CA    L+ G S H YA++R LL
Sbjct: 378 AFSQNGSAYEALELFHQMR-MGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLL 436

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ +  +L+ FY+K      A ++F+ +      V+W++MISG            +F 
Sbjct: 437 SSNVYVGTALLTFYAKCGDAESARVIFDGM-DQKSTVTWSAMISGYGIQGNGRGSLSIFG 495

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL------KLGFSNNTIGVNALMH 411
           +ML    + +     +IL +C+    +  G     W+L            +T     ++ 
Sbjct: 496 DMLKAELKPNEEIFTSILSACSHTGMIGEG-----WRLFTMICQDYNLVPSTKHYTCMVD 550

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +    G L  A   +Q++    D S +   +  C  +  F       K M +
Sbjct: 551 LLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLE 602



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 243/506 (48%), Gaps = 21/506 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    L  ST L++ Y +    + +  +F    + D ++W  +I     N      + F
Sbjct: 31  QGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGF 90

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M       D+     ++ A ++     +GR VHC  +K G   DS +    V+MYAK
Sbjct: 91  YNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGN-PDSFVFTGLVDMYAK 149

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++  S   F      +  SW+++++G + NN  +  L+ F  M     +A+ ++L   
Sbjct: 150 CGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGIL 209

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A   LG L  GK +H   IK G E   Y  +  +L+ +Y++CG +  A   F  +   
Sbjct: 210 VHACKKLGALHQGKWLHGYLIKCGIELGSY--LVTALLDLYAKCGVVRDARSVFDELHGI 267

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSW A+I G+  NG  EEA  L  + + + +V P+  T+ ++ S C+  L L  GRS+
Sbjct: 268 DIVSWTAMIVGYTQNGCPEEALKLFLQKEQV-AVLPNDVTIASVFSSCSQLLNLNLGRSI 326

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
           HG +I +L   D ++ NSL+DFY+K      A  +F  I+   D+V+WNS+IS   +   
Sbjct: 327 HGLSI-KLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISD-RDVVAWNSIISAFSQNGS 384

Query: 358 --EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVN 407
             E L L  Q           TL+++L +C S  +L+ G S H + +K G  S+N     
Sbjct: 385 AYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGT 444

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y  CGD  +A  +   +   S T  W+ +I      G+ + ++  F  M + +  
Sbjct: 445 ALLTFYAKCGDAESARVIFDGMDQKS-TVTWSAMISGYGIQGNGRGSLSIFGDMLKAE-L 502

Query: 468 SPDSVTLVNVISACGNLELAFEGKSL 493
            P+     +++SAC +  +  EG  L
Sbjct: 503 KPNEEIFTSILSACSHTGMIGEGWRL 528


>gi|297798028|ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312734|gb|EFH43157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 742

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 217/721 (30%), Positives = 349/721 (48%), Gaps = 77/721 (10%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+  R  + L I  G   +  + +  ++ YA  G  N S   F  +   D   WN+I+  
Sbjct: 45  LESLRKHNALIITGGNSENIFVASKLISSYASYGKPNLSSRVFDLVTRRDVFLWNSIIKA 104

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL-GYED 207
              N    + L +F  M  SG+  D+ +    V+A A L     G  +H   +K  G+E 
Sbjct: 105 HFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGFVLKHGGFER 164

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +   +V  S +  YS+CG ++ A   F  M  +DVV+W AII G   N + E A   L +
Sbjct: 165 N--TAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCK 222

Query: 268 MQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           M  + S   +P+  T+      C++   L+EGR +HG+A++  L    ++ +S+   YSK
Sbjct: 223 MHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIFSLYSK 282

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLA 373
           S + ++A L F  +    D+ SW S+I+ L            F EM     Q     +  
Sbjct: 283 SGNPAEAYLSFRELGD-QDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGMQPDGIVISC 341

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           ++        +  GK+ H + ++  FS ++   N+L+ MY     L  A  L  +IS   
Sbjct: 342 LISELGKKMLVPEGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEFLSVAEKLFCKISEEG 401

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           +T  WN                                     ++   G + L   GKSL
Sbjct: 402 NTEAWN------------------------------------TMLKGYGAVLL---GKSL 422

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   +K+ + L   V N+LI +YG+  D+  A  +F    + N+ TWN MI+++   +  
Sbjct: 423 HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNIVTWNAMIASYVYCEQP 481

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            +A+ LF  +    F+P+ I++V++L AC   G L  G+ IH ++     + N  +S+AL
Sbjct: 482 DKAIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLSTAL 541

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               K    W+ MIS YG HG    AI LF +M  S ++PT 
Sbjct: 542 IDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTG 601

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + ++LLSAC+H+GLV+ G   +  M  +YDV+P  +H+ C+VD+L RSG LQEA   + 
Sbjct: 602 PTFLALLSACTHAGLVEHGKNLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLQEAETTVM 660

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++P  P   +WG +LS+C  HG+ +MG ++A+     +P+N GYYI L+NMY A G+W+ 
Sbjct: 661 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMADRAVASDPQNDGYYIMLANMYSAAGKWEQ 720

Query: 776 A 776
           A
Sbjct: 721 A 721



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 174/615 (28%), Positives = 284/615 (46%), Gaps = 39/615 (6%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ++ L+++Y++      S  +F     +DV  WN++I A   N      L FF  M+  G
Sbjct: 66  VASKLISSYASYGKPNLSSRVFDLVTRRDVFLWNSIIKAHFSNGDYARSLGFFFSMLLSG 125

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSS 127
              D  T  ++VSA  ++     G  VH   +K  G   ++++   FV  Y+KCG L  +
Sbjct: 126 QSPDHFTAPMVVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGASFVYFYSKCGFLQDA 185

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SLSSAVAAS 184
              F  M   D V+W  I+SG + N   E+ L Y  +M   G   D     +L     A 
Sbjct: 186 CLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPRTLECGFQAC 245

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           + LG L  G+ +H   +K G   S  V   +S+ S+YS+ G+   A  +F  +  +D+ S
Sbjct: 246 SNLGALKEGRCLHGFAVKNGLASSNVVQ--SSIFSLYSKSGNPAEAYLSFRELGDQDMFS 303

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W +II     +G  EE+FD+  EMQ  + ++PD   +  LIS     +L+ EG++ HG+ 
Sbjct: 304 WTSIIASLVRSGNVEESFDMFWEMQ-NKGMQPDGIVISCLISELGKKMLVPEGKAFHGFV 362

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           IR     D  + NSL+  Y K   LS AE LF  I+   +  +WN+M+ G    +L    
Sbjct: 363 IRHCFSLDSTVCNSLLSMYCKFEFLSVAEKLFCKISEEGNTEAWNTMLKGYGAVLL---- 418

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
                                 GKS+HC+ +K         VN+L+ +Y   GDL  A+ 
Sbjct: 419 ----------------------GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 456

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +      N  T  WN +I +        +AI  F  M   +N  P S+TLV ++ AC N 
Sbjct: 457 MFCEADTNIVT--WNAMIASYVYCEQPDKAIALFDRMV-SENFKPSSITLVTLLMACANT 513

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                G+ +H   +++   ++  +  ALI MY +C  ++ +  +F++    +   WN MI
Sbjct: 514 GSLERGQMIHRYIIETEHEMNLSLSTALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMI 573

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           S +  +     A+ LF  +E    +P   + +++LSACT  G++ HGK +   +     +
Sbjct: 574 SGYGMHGHVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVK 633

Query: 602 ENSFISSALLDMYSN 616
            N    S L+D+ S 
Sbjct: 634 PNLKHYSCLVDLLSR 648



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 251/563 (44%), Gaps = 64/563 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +     S +  YS   + + +  +F E   +DVV W A+I+  V+NR     L + 
Sbjct: 161 GFERNTAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERALGYL 220

Query: 62  GEMVEEGIRFDST---TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M   G   D     TL     A + +  LK+GR +H  ++K G+ + + + +   ++Y
Sbjct: 221 CKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVVQSSIFSLY 280

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +K G+   +  +F  +   D  SW +I++  + +   E+    F EM   G Q D + +S
Sbjct: 281 SKSGNPAEAYLSFRELGDQDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGMQPDGIVIS 340

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
             ++       +  GK  H   I+  +  DS   +V NSL+SMY +   +  AE+ F  +
Sbjct: 341 CLISELGKKMLVPEGKAFHGFVIRHCFSLDS---TVCNSLLSMYCKFEFLSVAEKLFCKI 397

Query: 238 TCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           + + +  +WN ++ G+                                      ++LL  
Sbjct: 398 SEEGNTEAWNTMLKGYG-------------------------------------AVLL-- 418

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+S+H Y ++  L   + ++NSL+D Y K   L+ A  +F       ++V+WN+MI+   
Sbjct: 419 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNIVTWNAMIASYV 476

Query: 354 ---------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF  M+    + S  TL+ +L +C +  SLE G+ IH + ++     N  
Sbjct: 477 YCEQPDKAIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLS 536

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ MY  CG L  +  L    S   D  CWN++I     +GH + AI  F  M ++
Sbjct: 537 LSTALIDMYAKCGHLEKSRELFDAASQK-DAVCWNVMISGYGMHGHVESAIALFDQM-EE 594

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +  P   T + ++SAC +  L   GK+L     +  +  + +  + L+ +  R  +++ 
Sbjct: 595 SDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLQE 654

Query: 525 A-STVFESCYNCNLCTWNCMISA 546
           A +TV    ++ +   W  ++S+
Sbjct: 655 AETTVMSMPFSPDGVIWGTLLSS 677



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 6/250 (2%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y  +     +  +F E  + ++VTWNAMI + V        +  F  MV E  + 
Sbjct: 440 SLIDLYGKMGDLTVAWRMFCEA-DTNIVTWNAMIASYVYCEQPDKAIALFDRMVSENFKP 498

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            S TL+ ++ A      L++G+++H   I+     + SL    ++MYAKCG L  S   F
Sbjct: 499 SSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLSTALIDMYAKCGHLEKSRELF 558

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                 D V WN ++SG   + + E  +  F +M  S  +    +  + ++A    G + 
Sbjct: 559 DAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVE 618

Query: 192 YGKVIHALGIKL-GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
           +GK    L +K+  Y+  P +   + L+ + S+ G+++ AE     M    D V W  ++
Sbjct: 619 HGK---NLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLQEAETTVMSMPFSPDGVIWGTLL 675

Query: 250 DGFALNGKFE 259
                +G+FE
Sbjct: 676 SSCMTHGEFE 685



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L  ST+L+  Y+   + E S  LF     KD V WN MI+    +  V   +  F +M 
Sbjct: 534 NLSLSTALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQME 593

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGR----VVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           E  ++    T L ++SA T    ++ G+     +H   +K  +   S L    V++ ++ 
Sbjct: 594 ESDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVKPNLKHYSCL----VDLLSRS 649

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCL 150
           G+L  +E T   M    D V W T++S C+
Sbjct: 650 GNLQEAETTVMSMPFSPDGVIWGTLLSSCM 679


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 229/828 (27%), Positives = 402/828 (48%), Gaps = 61/828 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+  Y  +    S+  LF E   K++V+W+ +I+   +NR        F
Sbjct: 170 GFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF 229

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNC--LKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             ++  G+  +   +   + A  Q     +K G  +H    K   ++D  L NV ++MY+
Sbjct: 230 KGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYS 289

Query: 120 KC-GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ----ADN 174
            C G ++ +   F  +   ++V+WN+I+S              F  M   G +     + 
Sbjct: 290 DCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNE 349

Query: 175 VSLSSAVAASACLGELSYGKVIHALGI--KLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            +L S V A+  L +     +   L    K G+    YV   ++L++ +++ G ++ A+ 
Sbjct: 350 YTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVG--SALVNGFARYGLMDCAKM 407

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  ++ V+ N ++ G A   + EEA  +  EM+ +  VE +  ++V L+S   +  
Sbjct: 408 IFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL--VEINSESLVVLLSTFTEFS 465

Query: 293 LLREGR----SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            L+EG+     VH Y  R  L+   + + N+L++ Y K  ++  A  +F  + P  D VS
Sbjct: 466 NLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQ-LMPSKDTVS 524

Query: 348 WNSMISGL-----FKEML----------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           WNSMISGL     F+E +           + S FS   +++ L SC+S   L  G+ IH 
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS---VISTLSSCSSLGWLTLGRQIHG 581

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ-NGHF 451
              K G   +    NAL+ +Y     +     +  ++      S WN  I A  +     
Sbjct: 582 EGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVS-WNSFIGALAKYEASV 640

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            +A+K F  M  Q    P+ VT +N+++A  +  +   G  +H L LK  +  D  ++NA
Sbjct: 641 LQALKYFLEM-MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENA 699

Query: 512 LITMYGRCRDIKSASTVFES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI 570
           L+  YG+C  ++    +F       +  +WN MIS +  +    +A++L   +     ++
Sbjct: 700 LLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKL 759

Query: 571 ---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
              +  ++LSAC  +  L  G ++H        + +  + SAL+DMY+ C          
Sbjct: 760 DGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFF 819

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                ++  +W+SMIS Y  HG G +A+++F  M   G  P   + + +LSACSH GLVD
Sbjct: 820 ELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVD 879

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EG +++ +M E Y + P  EH  C+VD+LGR+G +++  +FIK +P+ P   +W  +L A
Sbjct: 880 EGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGA 939

Query: 733 C--SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           C  ++  +T++G++ A++L +LEP+N   Y+ LSNM+ A G W+D VE
Sbjct: 940 CCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVE 987



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 195/732 (26%), Positives = 342/732 (46%), Gaps = 85/732 (11%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H    K G   D   CN  +N+Y + G+L S+   F  M   + VSW+ ++SG   N  
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVS 212
           P++    F+ +  SG   ++ ++ SA+ A    G   +  G  IHA   KL     P VS
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKL-----PCVS 276

Query: 213 ---VTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
              ++N L+SMYS C G I+ A R F  +  ++ V+WN+II  +   G    AF L   M
Sbjct: 277 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 336

Query: 269 QLMRSVE----PDIATVVTLISL------CADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           Q M  VE    P+  T+ +L++       C   LL +    +      R    DL + ++
Sbjct: 337 Q-MEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLR----DLYVGSA 391

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQF 366
           L++ +++   +  A+++F  +   N  V+ N ++ GL            FKEM  L  + 
Sbjct: 392 LVNGFARYGLMDCAKMIFKQMYDRN-AVTMNGLMVGLARQHQGEEAAKVFKEMKDLV-EI 449

Query: 367 SFSTLLAILPS----CNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVA 421
           +  +L+ +L +     N  E    G+ +H +  + G  +  I + NAL++MY  C  +  
Sbjct: 450 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDN 509

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A S+ Q +  + DT  WN +I     N  F+EA+  F +M ++    P + ++++ +S+C
Sbjct: 510 ACSVFQLMP-SKDTVSWNSMISGLDHNERFEEAVSCFHTM-KRNGMVPSNFSVISTLSSC 567

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +L     G+ +HG   K  + LD  V NAL+T+Y     I     VF      +  +WN
Sbjct: 568 SSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWN 627

Query: 542 CMISAFSQNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             I A ++ +A V +AL+ F  +    + PN ++ ++IL+A +   VL  G QIH  +  
Sbjct: 628 SFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK 687

Query: 598 LGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIE 641
               +++ I +ALL  Y  C                +   +W+SMIS Y + G   +A++
Sbjct: 688 YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMD 747

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI---- 697
           L   M   G +    +  ++LSAC+    ++ G++     +    VR   E  V +    
Sbjct: 748 LVWPMMQRGQKLDGFTFATVLSACASVATLERGME-----VHACAVRACLESDVVVGSAL 802

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE---- 753
           VDM  + GK+  A  F + +P++     W +M+S  + HG    G++  ++  +++    
Sbjct: 803 VDMYAKCGKIDYASRFFELMPVRNIYS-WNSMISGYARHGH---GQKALKIFTRMKQHGQ 858

Query: 754 -PENVGYYISLS 764
            P++V +   LS
Sbjct: 859 SPDHVTFVGVLS 870



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 29/221 (13%)

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           ++   LH    K+    D    N LI +Y R  ++ SA  +F+     NL +W+C+IS +
Sbjct: 157 YDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGY 216

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQE 602
           +QN+    A  LF+ +      PN  ++ S L AC Q G   ++ G QIH  +  L    
Sbjct: 217 TQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVS 276

Query: 603 NSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           +  +S+ L+ MYS+C                +++  W+S+IS Y   G    A +LF  M
Sbjct: 277 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 336

Query: 647 CNSGI----RPTKSSVISLLS-ACSHSGLVDEGLQYYNNML 682
              G+    RP + ++ SL++ ACS   L D GL     ML
Sbjct: 337 QMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQML 374



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 165/389 (42%), Gaps = 35/389 (8%)

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +  SL     +H    K GF+++    N L+++Y+  G+LV+A  L   +   +  S W
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVS-W 209

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA---CGNLELAFEGKSLHG 495
           + +I   TQN    EA   FK +       P+   + + + A   CG+  +   G  +H 
Sbjct: 210 SCLISGYTQNRMPDEACSLFKGVI-SSGLLPNHFAVGSALRACQQCGSTGIKL-GMQIHA 267

Query: 496 LALKSLMGLDTRVQNALITMYGRCR-DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
              K     D  + N L++MY  C   I  A  VF+     N  TWN +IS + +    V
Sbjct: 268 FICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAV 327

Query: 555 RALELFRHLEFE-------PNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQENSF 605
            A +LF  ++ E       PNE ++ S+++A   L    L   +Q+   +   GF  + +
Sbjct: 328 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLY 387

Query: 606 ISSALLDMYS-----NC----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + SAL++ ++     +C          ++    + ++       +G EA ++F EM +  
Sbjct: 388 VGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLV 447

Query: 651 IRPTKSSVISLLSACSHSGLVD---EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
              ++S V+ L +    S L +   +G + +  +     V         +V+M G+   +
Sbjct: 448 EINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAI 507

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
             A    + +P +     W +M+S   H+
Sbjct: 508 DNACSVFQLMPSKDTVS-WNSMISGLDHN 535


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 202/658 (30%), Positives = 321/658 (48%), Gaps = 92/658 (13%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S+   +++ Y  CG    A      +     V WN ++      G+ + A  +   M L 
Sbjct: 84  SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRM-LR 142

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
              +PD  T+   +  C +    R G + HG         ++ + N+L+  YS+S SL  
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLED 202

Query: 332 AELLFNAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS------TL 371
           A L+F+ I    ++D++SWNS+++             LF EM  +  + + +      ++
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISI 262

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG-------------- 417
           + ILP+C S ++L   K IH + ++ G   +    NAL+  Y  CG              
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322

Query: 418 -DLV----------------AAFSLLQRISHNS---DTSCWNIVIVACTQNGHFQEAIKT 457
            D+V                AAF L + +   +   D   W+ VI    Q G+ QEA+ T
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR--------- 507
           F+ M     + P+SVT+++++SAC +L    +G   H  +LK  L+ LD           
Sbjct: 383 FQQMILY-GSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGED 441

Query: 508 --VQNALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
             V NALI MY +CR  K+A T+F S      N+ TW  MI  ++Q      AL+LF  +
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501

Query: 564 -----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLDMYSN 616
                   PN  +I  IL AC  L  LR GKQIH +V      E+S  F+++ L+DMYS 
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+SM+S YG HG+G EA+++F +M  +G  P   S + L
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L ACSHSG+VD+GL Y++ M  +Y V    +H+ C++D+L RSG+L +A++ I+ +P++P
Sbjct: 622 LYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              +W A+LSAC  H + ++ +     L  ++ EN G Y  +SN+Y    RWKD   I
Sbjct: 682 SAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARI 739



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/642 (23%), Positives = 275/642 (42%), Gaps = 108/642 (16%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T ++ +Y        +L++         V WN ++ A +E   +   +     M+  G +
Sbjct: 87  TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL   + A  ++   + G   H L    G  ++  +CN  V MY++ G L  +   
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206

Query: 131 FSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREM------GWSGEQADNVSLSSAV 181
           F  +      D +SWN+I++  +  + P   L  F EM        + E++D +S+ + +
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L   K IH+  I+ G     +  V N+LI  Y++CG ++ A   F  M  KD
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAF--VCNALIDTYAKCGSMKDAVNVFNVMEFKD 324

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQ-------------------------------- 269
           VVSWNA++ G+  +GKF  AF+L   M+                                
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384

Query: 270 --LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL------------GYDLLM 315
             ++   EP+  T+++L+S CA    L +G   H Y++++ L            G DL++
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKEML-- 360
            N+L+D YSK  S   A  +FN+I     ++V+W  MI G            LF EM+  
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504

Query: 361 -YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI--GVNALMHMYINCG 417
            Y  +  ++ T+  IL +C    SL  GK IH +  +     +++    N L+ MY  CG
Sbjct: 505 PYAVAPNAY-TISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCG 563

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D+  A ++   +   ++ S W  ++     +G  +EA+  F  M Q+    PD ++ + +
Sbjct: 564 DVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGRGKEALDIFDKM-QKAGFVPDDISFLVL 621

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC +  +  +G     + ++S  G+    Q+                           
Sbjct: 622 LYACSHSGMVDQGLDYFDI-MRSDYGVIASAQH--------------------------- 653

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
             + C+I   +++    +A +  + +  EP+    V++LSAC
Sbjct: 654 --YACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSAC 693



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 177/730 (24%), Positives = 306/730 (41%), Gaps = 105/730 (14%)

Query: 105 IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
           ++  SL    V  Y  CG  + +      +  +  V WN ++   +     ++ +     
Sbjct: 80  VSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCR 139

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M  +G + D+ +L  A+ A   L     G   H L    G+E +  V V N+L++MYS+ 
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESN--VFVCNALVAMYSRS 197

Query: 225 GDIEAAERAFWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-----RSVEP 276
           G +E A   F  +T K   DV+SWN+I+           A DL  EM  +      +   
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERS 257

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           DI ++V ++  CA    L + + +H YAIR     D  + N+L+D Y+K  S+  A  +F
Sbjct: 258 DIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVF 317

Query: 337 NAIAPMNDLVSWNSMISGL----------------------------------------- 355
           N +    D+VSWN+M++G                                          
Sbjct: 318 N-VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYG 376

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK------------L 397
                 F++M+   S+ +  T++++L +C S  +L  G   H + LK             
Sbjct: 377 QEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGD 436

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIK 456
           G   + +  NAL+ MY  C    AA ++   I     +   W ++I    Q G   +A+K
Sbjct: 437 GDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALK 496

Query: 457 TFKSMTQQQNA-SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALI 513
            F  M  +  A +P++ T+  ++ AC +L     GK +H    +      +   V N LI
Sbjct: 497 LFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLI 556

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
            MY +C D+ +A  VF+S    N  +W  M+S +  +     AL++F  ++   F P++I
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAY 630
           S + +L AC+  G++  G       F +   +   I+SA        +  A    +++  
Sbjct: 617 SFLVLLYACSHSGMVDQGLD----YFDIMRSDYGVIASA--------QHYACVIDLLARS 664

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-HSGLVDEGLQYYNNMLEEYDVRP 689
           G   K W+ I+   EM    + P+ +  ++LLSAC  HS +  E  +Y  N L       
Sbjct: 665 GRLDKAWKTIQ---EM---PMEPSAAIWVALLSACRVHSNV--ELAEYALNKLVSMKAEN 716

Query: 690 ETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPG---VWGAMLSACSHHGDT--KMG 742
           +  + +   I     R   +    + +K   I+ +PG   V G   +A    GD    + 
Sbjct: 717 DGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLS 776

Query: 743 KQVAELLFKL 752
            ++  LL +L
Sbjct: 777 PEIYSLLERL 786



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 239/555 (43%), Gaps = 81/555 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVENRCVVMGL 58
           GF +++    +L+  YS     E +  +F E   K   DV++WN+++ A V+       L
Sbjct: 179 GFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238

Query: 59  HFFGEM---VEEGI---RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN 112
             F EM   V E     R D  +++ I+ A   +  L Q + +H  +I+ G  AD+ +CN
Sbjct: 239 DLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCN 298

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWN----------------------------- 143
             ++ YAKCG +  +   F+ M   D VSWN                             
Sbjct: 299 ALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358

Query: 144 ------TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
                  +++G     Y ++ L  F++M   G + ++V++ S ++A A LG LS G   H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418

Query: 198 ALGIK----------LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSW 245
           A  +K           G  D   + V N+LI MYS+C   +AA   F  +  ++  VV+W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478

Query: 246 NAIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
             +I G+A  G   +A  L  EM     +V P+  T+  ++  CA    LR G+ +H Y 
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAY- 537

Query: 305 IRRLLGYD---LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           + R   Y+     + N L+D YSK   +  A  +F+++ P  + VSW SM+SG       
Sbjct: 538 VTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM-PKRNEVSWTSMMSGYGMHGRG 596

Query: 355 -----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
                +F +M    ++    SF   L +L +C+    ++ G       +   G   +   
Sbjct: 597 KEALDIFDKMQKAGFVPDDISF---LVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQH 653

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
              ++ +    G L  A+  +Q +      + W  ++ AC  + + + A      +   +
Sbjct: 654 YACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMK 713

Query: 466 NASPDSVTLVNVISA 480
             +  S TL++ I A
Sbjct: 714 AENDGSYTLISNIYA 728


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 183/652 (28%), Positives = 322/652 (49%), Gaps = 40/652 (6%)

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
            + +G  G   D+ +          L + + GK +    I+ G + + Y    N+LI +Y
Sbjct: 45  LQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYE--LNTLIKLY 102

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
           S CG++  A + F  +  K VV+WNA+I G+A  G  +EAF L  +M +   +EP I T 
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQM-VDEGLEPSIITF 161

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
           ++++  C+    L  G+ VH   +      D  +  +L+  Y K  S+  A  +F+ +  
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH- 220

Query: 342 MNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKS 389
           + D+ ++N M+ G  K        E+ Y   Q        + L+IL  C +PE+L +GK+
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H   +  G  ++     +L+ MY  CG +  A  +   +    D   W ++I    +NG
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENG 339

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
           + ++A   F +M Q++   PD +T +++++AC         + +H     +  G D  V 
Sbjct: 340 NIEDAFGLFATM-QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS 398

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFE 566
            AL+ MY +C  IK A  VF++    ++ +W+ MI A+ +N     A E F   +    E
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA----- 621
           P+ ++ +++L+AC  LG L  G +I+          +  + +AL+ M  N K  +     
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIM--NAKHGSVERAR 516

Query: 622 ------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                        W++MI  Y  HG   EA+ LF  M     RP   + + +LSACS +G
Sbjct: 517 YIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAG 576

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
            VDEG +++  +LE   + P  + + C+VD+LGR+G+L EA   IK++P++P   +W ++
Sbjct: 577 FVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSL 636

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L AC  HG+  + ++ AE    ++P +   Y+ LS+MY A G W++  ++ K
Sbjct: 637 LVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRK 688



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 298/638 (46%), Gaps = 41/638 (6%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           E G   DS T + +    T++     G+ V    I+ G   +    N  + +Y+ CG++ 
Sbjct: 50  EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  +     V+WN +++G     + ++    FR+M   G +   ++  S + A +
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               L++GK +HA  +  G+       +  +L+SMY + G ++ A + F G+  +DV ++
Sbjct: 170 SPAGLNWGKEVHAQVVTAGFVSD--FRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTF 227

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N ++ G+A +G +E+AF+L + MQ +  ++P+  + ++++  C     L  G++VH   +
Sbjct: 228 NVMVGGYAKSGDWEKAFELFYRMQQV-GLKPNKISFLSILDGCWTPEALAWGKAVHAQCM 286

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
              L  D+ +  SL+  Y+   S+  A  +F+ +  + D+VSW  MI             
Sbjct: 287 NAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNM-KVRDVVSWTVMIEGYAENGNIEDAF 345

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           GLF  M     Q    T + I+ +C    +L   + IH      GF  + +   AL+HMY
Sbjct: 346 GLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMY 405

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +   +    D   W+ +I A  +NG+  EA +TF  M ++ N  PD VT
Sbjct: 406 AKCGAIKDARQVFDAMPRR-DVVSWSAMIGAYVENGYGTEAFETFHLM-KRSNIEPDGVT 463

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            +N+++ACG+L     G  ++  A+K+ +     + NALI M  +   ++ A  +F++  
Sbjct: 464 YINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMV 523

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
             ++ TWN MI  +S +     AL LF  +    F PN ++ V +LSAC++ G +  G++
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
              +               LL+      +   +  M+   G  G+  EA  L   M    
Sbjct: 584 FFTY---------------LLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMP--- 625

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNN--MLEEYD 686
           ++PT S   SLL AC   G +D   +      M++ YD
Sbjct: 626 VKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYD 663



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/533 (28%), Positives = 252/533 (47%), Gaps = 19/533 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  YS       +  +F    NK VVTWNA+I    +   V      F +MV+EG+  
Sbjct: 97  TLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEP 156

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T L ++ A +    L  G+ VH   + AG ++D  +    V+MY K G ++ +   F
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+H  D  ++N ++ G   +   EK    F  M   G + + +S  S +        L+
Sbjct: 217 DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALA 276

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +HA  +  G  D   + V  SLI MY+ CG IE A R F  M  +DVVSW  +I+G
Sbjct: 277 WGKAVHAQCMNAGLVDD--IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEG 334

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG  E+AF L   MQ    ++PD  T + +++ CA S  L   R +H        G 
Sbjct: 335 YAENGNIEDAFGLFATMQ-EEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGT 393

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLC 363
           DLL+  +L+  Y+K  ++  A  +F+A+ P  D+VSW++MI    +        E  +L 
Sbjct: 394 DLLVSTALVHMYAKCGAIKDARQVFDAM-PRRDVVSWSAMIGAYVENGYGTEAFETFHLM 452

Query: 364 SQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            + +      T + +L +C    +L+ G  I+   +K    ++    NAL+ M    G +
Sbjct: 453 KRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSV 512

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +    D   WN +I   + +G+ +EA+  F  M +++   P+SVT V V+S
Sbjct: 513 ERARYIFDTMVRR-DVITWNAMIGGYSLHGNAREALYLFDRMLKER-FRPNSVTFVGVLS 570

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDT-RVQNALITMYGRCRDIKSASTVFES 531
           AC       EG+      L+    + T ++   ++ + GR  ++  A  + +S
Sbjct: 571 ACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKS 623



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 211/466 (45%), Gaps = 17/466 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++     T+L++ Y      + +  +F     +DV T+N M+    ++         F
Sbjct: 188 GFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELF 247

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G++ +  + L I+        L  G+ VH   + AG++ D  +    + MY  C
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC 307

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   D VSW  ++ G   N   E     F  M   G Q D ++    +
Sbjct: 308 GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIM 367

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A    L++ + IH+     G+     VS   +L+ MY++CG I+ A + F  M  +D
Sbjct: 368 NACAISANLNHAREIHSQVDIAGFGTDLLVS--TALVHMYAKCGAIKDARQVFDAMPRRD 425

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW+A+I  +  NG   EAF+  H M+   ++EPD  T + L++ C     L  G  ++
Sbjct: 426 VVSWSAMIGAYVENGYGTEAFETFHLMK-RSNIEPDGVTYINLLNACGHLGALDVGMEIY 484

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             AI+  L   + + N+L+   +K  S+ +A  +F+ +    D+++WN+MI G       
Sbjct: 485 TQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMV-RRDVITWNAMIGGYSLHGNA 543

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNA 408
                LF  ML    + +  T + +L +C+    ++ G+    + L+  G          
Sbjct: 544 REALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGC 603

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++ +    G+L  A  L++ +     +S W+ ++VAC  +G+   A
Sbjct: 604 MVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 199/670 (29%), Positives = 331/670 (49%), Gaps = 68/670 (10%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +L  A  ++A L  L+  + IH   ++    D P  +V+N+L++ Y++CGD+ AA  
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS-LCADS 291
            F  M  +D V++N++I    L  ++  A D L +M L    E    T  TL+S L A S
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLL----EGHPLTSFTLVSVLLACS 171

Query: 292 LL---LREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA----PM 342
            L   LR GR  H +A++   L G +    N+L+  Y++   +  A+ LF ++     P 
Sbjct: 172 HLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPG 231

Query: 343 NDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
             +V+WN+M+S L +            +M+    +    T  + LP+C+  E L  G+ +
Sbjct: 232 GGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREM 291

Query: 391 HCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQN 448
           H + LK    + N+   +AL+ MY +   + AA  +   + +       WN +I    Q 
Sbjct: 292 HAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQA 351

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLALKSLMGLDTR 507
           G  ++A++ F  M  +    P   T+  V+ +C   E  F GK ++HG  +K  M  +  
Sbjct: 352 GLDEDALELFARMETEAGVVPSETTIAGVLPSCARSE-TFAGKEAVHGYVVKRGMADNPF 410

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           VQNAL+ +Y R  D+ +A  +F +    ++ +WN +I+          A +L R ++ + 
Sbjct: 411 VQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQG 470

Query: 567 --------------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
                               PN I+++++L  C  L     GK+IHG+        +  +
Sbjct: 471 RFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAV 530

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG- 650
            SAL+DMY+ C               ++   W+ +I AYG HG G EAI LF  M  S  
Sbjct: 531 GSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDE 590

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
            +P + + I+ L+ACSHSG+VD GL+ + +M   + V P  + H C VD+LGR+G+L EA
Sbjct: 591 AKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEA 650

Query: 711 YEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           Y  I ++ P + +   W + L AC  H +  +G+  AE LF+LEP+   +Y+ L N+Y A
Sbjct: 651 YRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSA 710

Query: 770 LGRWKDAVEI 779
            G W+ + E+
Sbjct: 711 AGLWEKSSEV 720



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 273/566 (48%), Gaps = 48/566 (8%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI--ADSSLCNVFVNMYAKCGDLNSSE 128
            D   L     +   +  L   R +H  +++  ++     ++ N  +  YA+CGDL ++ 
Sbjct: 55  LDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAAL 114

Query: 129 CTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
             F  M   D V++N++++  CL   +    L   R+M   G    + +L S + A + L
Sbjct: 115 ALFDAMPSRDAVTFNSLIAALCLFRRW-LPALDALRDMLLEGHPLTSFTLVSVLLACSHL 173

Query: 188 GE-LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD----- 241
            E L  G+  HA  +K G+ D       N+L+SMY++ G ++ A+  F  +   D     
Sbjct: 174 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGG 233

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV+WN ++     +G+  EA ++L++M + R V PD  T  + +  C+   +L  GR +H
Sbjct: 234 VVTWNTMVSLLVQSGRCGEAIEVLYDM-VARGVRPDGVTFASALPACSQLEMLSLGREMH 292

Query: 302 GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMI-----SG 354
            Y ++   L  +  + ++L+D Y+    +  A L+F+ + A    L  WN+MI     +G
Sbjct: 293 AYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAG 352

Query: 355 LFKEMLYLCSQF--------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           L ++ L L ++         S +T+  +LPSC   E+    +++H + +K G ++N    
Sbjct: 353 LDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQ 412

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ-- 464
           NALM +Y   GD+ AA  +   I    D   WN +I  C   GH ++A +  + M QQ  
Sbjct: 413 NALMDLYARLGDMDAARWIFATIEPR-DVVSWNTLITGCVVQGHIRDAFQLVREMQQQGR 471

Query: 465 ---------------QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
                          +   P+++TL+ ++  C  L     GK +HG A++  +  D  V 
Sbjct: 472 FTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVG 531

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----EF 565
           +AL+ MY +C  +  +  VF+     N+ TWN +I A+  +     A+ LF  +    E 
Sbjct: 532 SALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEA 591

Query: 566 EPNEISIVSILSACTQLGVLRHGKQI 591
           +PNE++ ++ L+AC+  G++  G ++
Sbjct: 592 KPNEVTFIAALAACSHSGMVDRGLEM 617



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 160/613 (26%), Positives = 283/613 (46%), Gaps = 61/613 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S +LLTAY+      ++LALF    ++D VT+N++I A    R  +  L    +M+ EG 
Sbjct: 97  SNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGH 156

Query: 70  RFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMI-ADSSLC-NVFVNMYAKCGDLNS 126
              S TL+ ++ A + +   L+ GR  H  ++K G +  D     N  ++MYA+ G ++ 
Sbjct: 157 PLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDD 216

Query: 127 SECTFSGMHCAD-----TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           ++  F  +   D      V+WNT++S  + +    + +    +M   G + D V+ +SA+
Sbjct: 217 AQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASAL 276

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMT 238
            A + L  LS G+ +HA  +K    D+   +   V ++L+ MY+    + AA   F  + 
Sbjct: 277 PACSQLEMLSLGREMHAYVLK----DADLAANSFVASALVDMYASHERVGAARLVFDMVP 332

Query: 239 C--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
              + +  WNA+I G+A  G  E+A +L   M+    V P   T+  ++  CA S     
Sbjct: 333 AGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAG 392

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
             +VHGY ++R +  +  + N+LMD Y++   +  A  +F  I P  D+VSWN++I+G  
Sbjct: 393 KEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEP-RDVVSWNTLITGCV 451

Query: 355 -------LFKEMLYLCSQFSFS---------------------TLLAILPSCNSPESLEF 386
                   F+ +  +  Q  F+                     TL+ +LP C    +   
Sbjct: 452 VQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPAR 511

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK IH + ++    ++    +AL+ MY  CG L  + ++  R+    +   WN++I+A  
Sbjct: 512 GKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRR-NVITWNVLIMAYG 570

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
            +G   EAI  F  M     A P+ VT +  ++AC +  +   G  +   ++K   G++ 
Sbjct: 571 MHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMF-RSMKRNHGVEP 629

Query: 507 R--VQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISA--FSQNKA--EVRALE 558
              +    + + GR   +  A  +  S       +  W+  + A    +N A  E+ A  
Sbjct: 630 TPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAER 689

Query: 559 LFRHLEFEPNEIS 571
           LF   E EP+E S
Sbjct: 690 LF---ELEPDEAS 699



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/272 (20%), Positives = 121/272 (44%), Gaps = 26/272 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +     +L+  Y+ +   +++  +F     +DVV+WN +IT CV    +      
Sbjct: 403 RGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQL 462

Query: 61  FGEMVEEGIRF-------------------DSTTLLIIVSALTQMNCLKQGRVVHCLSIK 101
             EM ++G RF                   ++ TL+ ++     +    +G+ +H  +++
Sbjct: 463 VREMQQQG-RFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVR 521

Query: 102 AGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLL 160
             + +D ++ +  V+MYAKCG L  S   F  +   + ++WN  IM+  +H    E   L
Sbjct: 522 HALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIAL 581

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLIS 219
           + R +     + + V+  +A+AA +  G +  G ++  ++    G E +P   +    + 
Sbjct: 582 FDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTP--DLHACAVD 639

Query: 220 MYSQCGDIEAAERAFWGMTC--KDVVSWNAII 249
           +  + G ++ A R    M    + V +W++ +
Sbjct: 640 ILGRAGRLDEAYRIISSMEPGEQQVSAWSSFL 671


>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
 gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
          Length = 719

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 200/750 (26%), Positives = 362/750 (48%), Gaps = 60/750 (8%)

Query: 44  MITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLK--QGRVVHCLSIK 101
           MITA  ++         F ++   G+  +   L+  ++     +CL   Q R VH  + +
Sbjct: 1   MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLN-----SCLADHQVRSVHECARE 55

Query: 102 AGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLY 161
                +  +    +N Y KCGDL S+   F GM   D +SW  +++G     +  + L  
Sbjct: 56  IHCEHEKIVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDL 115

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           +REM   G     ++  S ++A   LG L    ++H    + G +    +S+ N ++ MY
Sbjct: 116 YREMLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQG--LSIQNGVVCMY 173

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
            +CG +E A+  F  M  +DV+SW ++I  +A +G  ++A  L   M+L    +P+  T 
Sbjct: 174 HRCGSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMEL-EGEKPNKVTF 232

Query: 282 VTLISLCADSLLL-REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS-NSLSKAELLFNAI 339
           +  +  CA SL    E  ++H   I   L  D+++  +L++ Y KS  +L +A+ +F+ +
Sbjct: 233 LAAMEACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGV 292

Query: 340 APMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
              +++V WN++I+   +   + C   +   L          E ++          +  F
Sbjct: 293 EKRDNVV-WNALIAAYAQ---HGCRDRALDLL----------EQMQ----------RQSF 328

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +++I  NALM+MY  CG    A  L +      +   WN VI    QNG  Q ++  F 
Sbjct: 329 ESDSIVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFH 388

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M Q      D  TL+ V+ AC N      G+ +  LA +     + + Q AL+ M+ +C
Sbjct: 389 RM-QLAGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKC 447

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAF-----SQNKAEVRALELFRHLEFE---PNEIS 571
             + +A  VFES ++ +  +WN M++A+     S N     + +L + ++ +   P+ ++
Sbjct: 448 ETLDAAVEVFESMHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVT 507

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK------------- 618
           +V++LSAC     +  G+ +H      G   +  +++ ++D Y  C              
Sbjct: 508 LVTVLSACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMA 567

Query: 619 --SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
                 W+S+++ Y  HG G E +E F EM + G    + + +S+L ACSH GLV EG +
Sbjct: 568 KLDEVTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCK 627

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           Y+++M+ +Y  +P  EH  C++D+LGR+G L EA   +  +P +P    W ++L +C  H
Sbjct: 628 YFSSMIGDYGFQPIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVH 687

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           G+ ++G+  A  + + +PEN   ++ LS +
Sbjct: 688 GNLELGRDAALKVLEFDPENAAAHMLLSEI 717



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 182/698 (26%), Positives = 317/698 (45%), Gaps = 82/698 (11%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T+LL AY      ES+ A+F     +D+++W A+IT   +       L  + EM+ +G
Sbjct: 64  VATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYREMLMDG 123

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +     T L ++SA T++  L++  +VH    ++G     S+ N  V MY +CG + +++
Sbjct: 124 VSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCGSVENAK 183

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA-CL 187
             F  M   D +SW ++++    +   +  +  +R M   GE+ + V+  +A+ A A  L
Sbjct: 184 LVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEACAKSL 243

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAAERAFWGMTCKDVVSWN 246
                 + +H   I+ G E    V V  +L++MY +    +  A+  F G+  +D V WN
Sbjct: 244 APEEEAEALHRCVIESGLETD--VVVATALVNMYGKSARTLGRAQEIFDGVEKRDNVVWN 301

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I  +A +G  + A DLL +MQ                                    R
Sbjct: 302 ALIAAYAQHGCRDRALDLLEQMQ------------------------------------R 325

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
           +    D ++ N+LM+ Y K      A  LF A   + +++SWN++I+             
Sbjct: 326 QSFESDSIVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMV 385

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF  M         +TLL +L +C +P +L  G+ +     + G+ +      AL+ M+ 
Sbjct: 386 LFHRMQLAGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHA 445

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIV-----ACTQNGHFQEAIKTFKSMTQQQNASP 469
            C  L AA  + + + H+ DT  WN ++      AC+ NG ++E+ K  + M Q   A P
Sbjct: 446 KCETLDAAVEVFESM-HHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQM-QVDGAVP 503

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D+VTLV V+SAC       +G+++H  A ++ +  D  V N ++  YG+C  +  A  V 
Sbjct: 504 DTVTLVTVLSACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVL 563

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
           +     +  TWN +++ ++Q+   V  LE F   +H  +  N I+ +S+L AC+ +G++ 
Sbjct: 564 DKMAKLDEVTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVA 623

Query: 587 HG-KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
            G K     +   GFQ         ++ +  C        MI   G  G   EA  L   
Sbjct: 624 EGCKYFSSMIGDYGFQP--------IEEHCGC--------MIDLLGRAGHLSEAKMLLAR 667

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           M     +P   + +SLL +C   G ++ G      +LE
Sbjct: 668 M---PFKPNLIAWMSLLGSCKVHGNLELGRDAALKVLE 702



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 138/603 (22%), Positives = 257/603 (42%), Gaps = 91/603 (15%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L     ++  Y      E++  +F     +DV++W +MI A  ++      +  +  M  
Sbjct: 163 LSIQNGVVCMYHRCGSVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMEL 222

Query: 67  EGIRFDSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DL 124
           EG + +  T L  + A  + +   ++   +H   I++G+  D  +    VNMY K    L
Sbjct: 223 EGEKPNKVTFLAAMEACAKSLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTL 282

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             ++  F G+   D V WN +++    +   ++ L    +M     ++D++         
Sbjct: 283 GRAQEIFDGVEKRDNVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSI--------- 333

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVV 243
                                       V N+L++MY +CG  E A R F      ++V+
Sbjct: 334 ----------------------------VRNALMNMYGKCGCAEDALRLFEASPRLQNVI 365

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWN +I   A NG+ + +  L H MQL   V  D AT++T++  C +   LR GR V   
Sbjct: 366 SWNTVIAVHAQNGEHQRSMVLFHRMQLA-GVPADRATLLTVLYACTNPAALRTGRIVREL 424

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
           A +R   +++    +L+  ++K  +L  A  +F ++    D  SWN+M++          
Sbjct: 425 ATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFESM-HHRDTPSWNAMVAAYGYHACSLN 483

Query: 354 GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           G +KE   L  Q           TL+ +L +C +  ++  G+++H +  + G  ++    
Sbjct: 484 GRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAKGRAVHRFAAENGLMSDVAVA 543

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N ++  Y  CG L+ A ++L +++   D   WN ++    Q+G+  E ++ F  M Q + 
Sbjct: 544 NGVVDFYGKCGCLLEARAVLDKMA-KLDEVTWNSLLAGYAQHGYGVETLEAFTEM-QHRG 601

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            S + +T ++V+ AC ++ L  EG                +  +++I  YG         
Sbjct: 602 YSANRITFMSVLHACSHVGLVAEG---------------CKYFSSMIGDYG-------FQ 639

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
            + E C         CMI    +      A  L   + F+PN I+ +S+L +C   G L 
Sbjct: 640 PIEEHC--------GCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVHGNLE 691

Query: 587 HGK 589
            G+
Sbjct: 692 LGR 694



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 130/270 (48%), Gaps = 9/270 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--- 57
           RG+   +   T+L+  ++     ++++ +F    ++D  +WNAM+ A   + C + G   
Sbjct: 428 RGYHHEVKFQTALVLMHAKCETLDAAVEVFESMHHRDTPSWNAMVAAYGYHACSLNGRWK 487

Query: 58  --LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
                  +M  +G   D+ TL+ ++SA    + + +GR VH  + + G+++D ++ N  V
Sbjct: 488 ESFKLLQQMQVDGAVPDTVTLVTVLSACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVV 547

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           + Y KCG L  +      M   D V+WN++++G   + Y  + L  F EM   G  A+ +
Sbjct: 548 DFYGKCGCLLEARAVLDKMAKLDEVTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRI 607

Query: 176 SLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           +  S + A + +G ++ G K   ++    G++  P       +I +  + G +  A+   
Sbjct: 608 TFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQ--PIEEHCGCMIDLLGRAGHLSEAKMLL 665

Query: 235 WGMTCK-DVVSWNAIIDGFALNGKFEEAFD 263
             M  K ++++W +++    ++G  E   D
Sbjct: 666 ARMPFKPNLIAWMSLLGSCKVHGNLELGRD 695


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 186/608 (30%), Positives = 312/608 (51%), Gaps = 41/608 (6%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P    T SL+  ++  G ++ A+ A      +D    N +I G A +     A    +  
Sbjct: 40  PKPGGTKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLA-DAGLPGAALAAYAA 98

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSN 327
            L     PD  T   ++  CA    L EGR+ H  AIR  +   D+   NSL+ FY++  
Sbjct: 99  MLAAGARPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLG 158

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM-LYLCSQFSFSTLLAI 374
            +  AE +F+ + P  D+V+WNSM+ G             F+EM   L  Q     ++A 
Sbjct: 159 LVDDAERVFDGM-PARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAA 217

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L +C    +L  G+ +H + ++ G  ++     +++ MY  CGD+ +A  +   +   + 
Sbjct: 218 LAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTV 277

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
            + WN +I     N   +EA   F  M + +    + VT +N+++AC   E +  G+S+H
Sbjct: 278 VT-WNCMIGGYALNERPEEAFDCFVQM-KAEGHQVEVVTAINLLAACAQTESSLYGRSVH 335

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           G   +        ++ AL+ MY +   +KS+  VF       L +WN MI+A+   +  +
Sbjct: 336 GYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYM 395

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+ LF  L      P+  ++ +++ A   LG+LR  +Q+H ++  LG+ EN+ I +A++
Sbjct: 396 EAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIM 455

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY+ C               K   +W++MI  Y  HG+G  A+E+F EM  +G+RP +S
Sbjct: 456 HMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNES 515

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + +S+L+ACS SGL DEG   +N+M  +Y + P+ EH+ C+ D+LGR+G L+E  +FI+N
Sbjct: 516 TFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIEN 575

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP-----ENVGYYISLSNMYVALG 771
           +PI P   VWG++L+A  +  D  + +  AE +F+LE      +N G Y+ +S+MY   G
Sbjct: 576 MPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAG 635

Query: 772 RWKDAVEI 779
           RWKD   I
Sbjct: 636 RWKDVERI 643



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 197/388 (50%), Gaps = 17/388 (4%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A + T  SLL  Y+ +   + +  +F     +DVVTWN+M+   V N    + L  F EM
Sbjct: 142 ADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREM 201

Query: 65  VEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
            E   ++ D   ++  ++A    + L QGR VH   I+ GM  D  +    ++MY KCGD
Sbjct: 202 HEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGD 261

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           + S+E  F+ M     V+WN ++ G   N  PE+    F +M   G Q + V+  + +AA
Sbjct: 262 IASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAA 321

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A      YG+ +H    +  +   P+V +  +L+ MYS+ G ++++E+ F  MT K +V
Sbjct: 322 CAQTESSLYGRSVHGYITRRQF--LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLV 379

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWN +I  +     + EA  L  ++ L + + PD  T+  ++       LLR+ R +H Y
Sbjct: 380 SWNNMIAAYMYKEMYMEAITLFLDL-LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSY 438

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            IR   G + L+MN++M  Y++   +  +  +F+ +A   D++SWN+MI G         
Sbjct: 439 IIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAA-KDVISWNTMIMGYAIHGQGRS 497

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCN 379
              +F EM     + + ST +++L +C+
Sbjct: 498 ALEMFSEMKCNGLRPNESTFVSVLTACS 525



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   TS+L  Y       S+  +F    ++ VVTWN MI     N         F
Sbjct: 241 GMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCF 300

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG + +  T + +++A  Q      GR VH    +   +    L    + MY+K 
Sbjct: 301 VQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKV 360

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + SSE  F  M     VSWN +++  ++     + +  F ++       D  ++S+ V
Sbjct: 361 GKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVV 420

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG L   + +H+  I+LGY ++    + N+++ MY++CGD+ ++   F  M  KD
Sbjct: 421 PAFVLLGLLRQCRQMHSYIIRLGYGENTL--IMNAIMHMYARCGDVLSSREIFDKMAAKD 478

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           V+SWN +I G+A++G+   A ++  EM+    + P+ +T V++++ C+ S L  EG
Sbjct: 479 VISWNTMIMGYAIHGQGRSALEMFSEMKC-NGLRPNESTFVSVLTACSVSGLTDEG 533



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R FL H+   T+LL  YS V   +SS  +F +   K +V+WN MI A +     +  +  
Sbjct: 341 RQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITL 400

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +++ + +  D  T+  +V A   +  L+Q R +H   I+ G   ++ + N  ++MYA+
Sbjct: 401 FLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYAR 460

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD+ SS   F  M   D +SWNT++ G   +      L  F EM  +G + +  +  S 
Sbjct: 461 CGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSV 520

Query: 181 VAASACLG 188
           + A +  G
Sbjct: 521 LTACSVSG 528


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 190/626 (30%), Positives = 318/626 (50%), Gaps = 39/626 (6%)

Query: 185 ACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-D 241
           AC+    L  GK+IH   + LG ++   + +  +LI++Y  C   + A+  F  M    +
Sbjct: 12  ACMNSKSLKQGKLIHQKVVTLGLQND--IFLCKNLINLYLSCHLYDHAKCVFDNMENPCE 69

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +  WN ++ G+  N  + EA +L  ++     ++PD  T  +++  C        G+ +H
Sbjct: 70  ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
              ++  L  D+++ +SL+  Y+K N+  KA  LFN + P  D+  WN++IS     G F
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEM-PEKDVACWNTVISCYYQSGNF 188

Query: 357 KEMLY---LCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           KE L    L  +F F     T+   + SC     L  G  IH   +  GF  ++   +AL
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A  + +++   +  + WN +I      G     I+ FK M   +   P
Sbjct: 249 VDMYGKCGHLEMAIEVFEQMPKKTVVA-WNSMISGYGLKGDSISCIQLFKRM-YNEGVKP 306

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              TL ++I  C       EGK +HG  +++ +  D  + ++L+ +Y +C  ++ A  +F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIF 366

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
           +      + +WN MIS +        AL LF  +     EP+ I+  S+L+AC+QL  L 
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            G++IH  +       N  +  ALLDMY+ C               +   +W+SMI+AYG
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG+ + A+ELF EM  S ++P + + +++LSAC H+GLVDEG  Y+N M+  Y + P  
Sbjct: 487 SHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRV 546

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           EH+ C++D+LGR+G+L EAYE ++  P I+    +   + SAC  H +  +G ++A  L 
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLI 606

Query: 751 KLEPENVGYYISLSNMYVALGRWKDA 776
             +P++   YI LSNMY +  +W + 
Sbjct: 607 DKDPDDSSTYILLSNMYASAHKWDEV 632



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 179/674 (26%), Positives = 311/674 (46%), Gaps = 47/674 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  LL ++ A      LKQG+++H   +  G+  D  LC   +N+Y  C   + ++C F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61

Query: 132 SGMHCADTVS-WNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             M     +S WN +M+G   N  Y E   L+ + + +   + D+ +  S + A   L +
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYK 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              GK+IH   +K G      + V +SL+ MY++C   E A   F  M  KDV  WN +I
Sbjct: 122 YVLGKMIHTCLVKTGLMMD--IVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  +G F+EA +    M+     EP+  T+ T IS CA  L L  G  +H   I    
Sbjct: 180 SCYYQSGNFKEALEYFGLMRRF-GFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  + ++L+D Y K   L  A  +F  + P   +V+WNSMISG            LFK
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEVFEQM-PKKTVVAWNSMISGYGLKGDSISCIQLFK 297

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + + +TL +++  C+    L  GK +H + ++    ++    ++LM +Y  CG
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCG 357

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A ++ + I   S    WN++I      G   EA+  F  M ++    PD++T  +V
Sbjct: 358 KVELAENIFKLIP-KSKVVSWNVMISGYVAEGKLFEALGLFSEM-RKSYVEPDAITFTSV 415

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++AC  L    +G+ +H L ++  +  +  V  AL+ MY +C  +  A +VF+     +L
Sbjct: 416 LTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDL 475

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  MI+A+  +     ALELF  +     +P+ ++ ++ILSAC   G++  G      
Sbjct: 476 VSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG------ 529

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                     +  + ++++Y        +S +I   G  G+  EA E+  +  N  IR  
Sbjct: 530 ---------CYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ--NPEIRDD 578

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYEF 713
              + +L SAC     +D G +    ++   D  P ++  ++ + +M   + K  E    
Sbjct: 579 VELLSTLFSACRLHRNIDLGAEIARTLI---DKDPDDSSTYILLSNMYASAHKWDEVRVV 635

Query: 714 ---IKNLPIQPKPG 724
              +K L ++  PG
Sbjct: 636 RSKMKELGLKKNPG 649



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 254/510 (49%), Gaps = 22/510 (4%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVV 95
           ++  WN ++    +N   V  L  F +++    ++ DS T   ++ A   +     G+++
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +K G++ D  + +  V MYAKC     +   F+ M   D   WNT++S    +   
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           ++ L YF  M   G + ++V++++A+++ A L +L+ G  IH   I  G+    ++S  +
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS--S 246

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY +CG +E A   F  M  K VV+WN++I G+ L G       L   M     V+
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMY-NEGVK 305

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T+ +LI +C+ S  L EG+ VHGY IR  +  D+ + +SLMD Y K   +  AE +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENI 365

Query: 336 FNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  I P + +VSWN MIS            GLF EM     +    T  ++L +C+   +
Sbjct: 366 FKLI-PKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAA 424

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE G+ IH   ++    NN + + AL+ MY  CG +  AFS+ + +    D   W  +I 
Sbjct: 425 LEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMIT 483

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A   +G    A++ F  M  Q N  PD VT + ++SACG+  L  EG   +   + ++ G
Sbjct: 484 AYGSHGQAYVALELFAEML-QSNMKPDRVTFLAILSACGHAGLVDEG-CYYFNQMVNVYG 541

Query: 504 LDTRVQN--ALITMYGRCRDIKSASTVFES 531
           +  RV++   LI + GR   +  A  + + 
Sbjct: 542 IIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 195/389 (50%), Gaps = 28/389 (7%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           LL +L +C + +SL+ GK IH   + LG  N+      L+++Y++C     A  +   + 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           +  + S WN ++   T+N  + EA++ F+ +       PDS T  +V+ ACG L     G
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLG 125

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H   +K+ + +D  V ++L+ MY +C   + A  +F      ++  WN +IS + Q+
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 551 KAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                ALE F   R   FEPN ++I + +S+C +L  L  G +IH  + + GF  +SFIS
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           SAL+DMY  C               K+  AW+SMIS YG  G     I+LF  M N G++
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVK 305

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQ 708
           PT +++ SL+  CS S  + EG       +  Y +R   +  V I    +D+  + GK++
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEG-----KFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVE 360

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            A    K +P + K   W  M+S     G
Sbjct: 361 LAENIFKLIP-KSKVVSWNVMISGYVAEG 388



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 228/503 (45%), Gaps = 53/503 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   +SL+  Y+  + FE ++ LF E   KDV  WN +I+   ++      L +F
Sbjct: 136 GLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M   G   +S T+   +S+  ++  L +G  +H   I +G + DS + +  V+MY KC
Sbjct: 196 GLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M     V+WN+++SG         C+  F+ M   G +    +LSS +
Sbjct: 256 GHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLI 315

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    L  GK +H   I+   +    V + +SL+ +Y +CG +E AE  F  +    
Sbjct: 316 MVCSRSARLLEGKFVHGYTIRNRIQSD--VFINSSLMDLYFKCGKVELAENIFKLIPKSK 373

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G+   GK  EA  L  EM+    VEPD  T  ++++ C+    L +G  +H
Sbjct: 374 VVSWNVMISGYVAEGKLFEALGLFSEMR-KSYVEPDAITFTSVLTACSQLAALEKGEEIH 432

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I + L  + ++M +L+D Y+K  ++ +A  +F  + P  DLVSW SMI+        
Sbjct: 433 NLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCL-PKRDLVSWTSMITAYGSHGQA 491

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EML    +    T LAIL +C     ++ G    C+                
Sbjct: 492 YVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEG----CY---------------- 531

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
              Y N   +V  + ++ R+ H      ++ +I    + G   EA   ++ + Q      
Sbjct: 532 ---YFN--QMVNVYGIIPRVEH------YSCLIDLLGRAGRLHEA---YEILQQNPEIRD 577

Query: 470 DSVTLVNVISAC---GNLELAFE 489
           D   L  + SAC    N++L  E
Sbjct: 578 DVELLSTLFSACRLHRNIDLGAE 600


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 201/641 (31%), Positives = 325/641 (50%), Gaps = 48/641 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D V+L   +A  AC G+L  G  IH      G+  + +V V+N+++ MY + G  + A  
Sbjct: 2   DEVTL--CLALKACRGDLKRGCQIHGFSTTSGF--TSFVCVSNAVMGMYRKAGRFDNALC 57

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  +   DVVSWN I+ GF  N   + A + +  M+    V  D  T  T +S C  S 
Sbjct: 58  IFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMK-SAGVVFDAFTYSTALSFCVGSE 113

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               G  +    ++  L  DL++ NS +  YS+S S   A  +F+ ++   D++SWNS++
Sbjct: 114 GFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLL 172

Query: 353 SGL-------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           SGL             F++M+    +    +  +++ +C     L+  + IH   +K G+
Sbjct: 173 SGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 232

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +     N LM  Y  CG L A  S+  ++S  +  S W  +I     + +  +A+  F 
Sbjct: 233 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVS-WTTMI-----SSNKDDAVSIFL 286

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           +M +     P+ VT V +I+A    E   EG  +HGL +K+    +  V N+ IT+Y + 
Sbjct: 287 NM-RFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 345

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--PNEISIVSILS 577
             ++ A   FE      + +WN MIS F+QN     AL++F     E  PNE +  S+L+
Sbjct: 346 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLN 405

Query: 578 ACT--QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSN 620
           A    +   ++ G++ H H+  LG      +SSALLDMY+               + K+ 
Sbjct: 406 AIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ 465

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             W+S+ISAY  HG     + LFH+M    + P   + +S+L+AC+  G+VD+G + +N 
Sbjct: 466 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNM 525

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M+E Y++ P  EH+ C+VDMLGR+G+L+EA E +  +P  P   +  +ML +C  HG+ K
Sbjct: 526 MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 585

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           MG +VAEL  +++PE  G Y+ + N+Y     W  A EI K
Sbjct: 586 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRK 626



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 173/621 (27%), Positives = 291/621 (46%), Gaps = 56/621 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK+G  +H  S  +G  +   + N  + MY K G  +++ C F  +   D VSWNTI+SG
Sbjct: 17  LKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSG 76

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY--GKVIHALGIKLGYE 206
              N      L +   M  +G   D  + S+A+  S C+G   +  G  + +  +K G E
Sbjct: 77  FDDNQI---ALNFVVRMKSAGVVFDAFTYSTAL--SFCVGSEGFLLGLQLQSTVVKTGLE 131

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE-EAFDLL 265
               + V NS I+MYS+ G    A R F  M+ KD++SWN+++ G +  G F  EA  + 
Sbjct: 132 SD--LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 189

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM--NSLMDFY 323
            +M +   VE D  +  ++I+ C     L+  R +HG  I+R  GY+ L+   N LM  Y
Sbjct: 190 RDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR--GYESLLEVGNILMSRY 246

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS-------TLLAILP 376
           SK   L   + +F+ ++  N +VSW +MIS    + + +     F        T + ++ 
Sbjct: 247 SKCGVLEAVKSVFHQMSERN-VVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 305

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +    E ++ G  IH   +K GF +     N+ + +Y     L  A    + I+     S
Sbjct: 306 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 365

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE--LAFEGKSLH 494
            WN +I    QNG   EA+K F S   +    P+  T  +V++A    E     +G+  H
Sbjct: 366 -WNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYTFGSVLNAIAFAEDISVKQGQRCH 422

Query: 495 GLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
              LK  +GL++   V +AL+ MY +  +I  +  VF      N   W  +ISA+S +  
Sbjct: 423 AHLLK--LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 480

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
               + LF  +  E   P+ ++ +S+L+AC + G++  G +I    F++           
Sbjct: 481 FETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEI----FNM----------- 525

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           ++++Y+   S+  +S M+   G  G+  EA EL  E+      P +S + S+L +C   G
Sbjct: 526 MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG---PGESMLQSMLGSCRLHG 582

Query: 670 LVDEGLQYYNNMLEEYDVRPE 690
            V  G +     +E   ++PE
Sbjct: 583 NVKMGAKVAELAME---MKPE 600



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/637 (24%), Positives = 288/637 (45%), Gaps = 64/637 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S +++  Y     F+++L +F    + DVV+WN +++   +N+   + L+F 
Sbjct: 31  GFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ---IALNFV 87

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+ FD+ T    +S          G  +    +K G+ +D  + N F+ MY++ 
Sbjct: 88  VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRS 147

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G    +   F  M   D +SWN+++SG      +  + ++ FR+M   G + D+VS +S 
Sbjct: 148 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSV 207

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +       +L   + IH L IK GYE    + V N L+S YS+CG +EA +  F  M+ +
Sbjct: 208 ITTCCHETDLKLARQIHGLCIKRGYE--SLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 265

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW  +I     +   ++A  +   M+    V P+  T V LI+    +  ++EG  +
Sbjct: 266 NVVSWTTMI-----SSNKDDAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKI 319

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-- 358
           HG  I+     +  + NS +  Y+K  +L  A+  F  I    +++SWN+MISG  +   
Sbjct: 320 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT-FREIISWNAMISGFAQNGF 378

Query: 359 -----MLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                 ++L +       +++F ++L  +       S++ G+  H   LKLG ++  +  
Sbjct: 379 SHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVS 437

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +AL+ MY   G++  +  +   +S   +   W  +I A + +G F+  +  F  M  ++N
Sbjct: 438 SALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSHGDFETVMNLFHKMI-KEN 495

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
            +PD VT ++V++AC                 K ++     + N +I +Y          
Sbjct: 496 VAPDLVTFLSVLTACNR---------------KGMVDKGYEIFNMMIEVYN--------- 531

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
              E  +      ++CM+    +      A EL   +   P E  + S+L +C   G ++
Sbjct: 532 --LEPSHE----HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 585

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
            G +    V  L  +    +S + + MY+       W
Sbjct: 586 MGAK----VAELAMEMKPELSGSYVQMYNIYAEKEEW 618



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 24/348 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+ + L     L++ YS     E+  ++F++   ++VV+W  MI++  ++      +  
Sbjct: 230 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSI 284

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  +G+  +  T + +++A+     +K+G  +H L IK G +++ S+ N F+ +YAK
Sbjct: 285 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 344

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L  ++  F  +   + +SWN ++SG   N +  + L  F  +  + E   N     +
Sbjct: 345 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGS 402

Query: 181 VAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           V  +    E   +  G+  HA  +KLG    P VS  ++L+ MY++ G+I+ +E+ F  M
Sbjct: 403 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEM 460

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + K+   W +II  ++ +G FE   +L H+M +  +V PD+ T +++++ C      R+G
Sbjct: 461 SQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACN-----RKG 514

Query: 298 RSVHGYAIRRLL--GYDLLMMNS----LMDFYSKSNSLSKAELLFNAI 339
               GY I  ++   Y+L   +     ++D   ++  L +AE L + +
Sbjct: 515 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 562


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 190/636 (29%), Positives = 317/636 (49%), Gaps = 109/636 (17%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN----SLISMYSQCGD 226
           + +  + SS +   A    L+ GK +H++ IK     S  V+V       L+S+Y+ CGD
Sbjct: 96  ELETKTYSSVLQLCAGSKSLTDGKKVHSI-IK-----SNNVAVDEVLGLKLVSLYATCGD 149

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           ++   R F  M  K+V  WN ++  +A  G F+E                         S
Sbjct: 150 LKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE-------------------------S 184

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           +C   +++ +G  + G                      +  S S+   LF+ +    D++
Sbjct: 185 ICLFKIMVEKG--IEG---------------------KRPESASE---LFDKLCD-RDVI 217

Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           SWNSMISG            ++K+M+YL      +T++++L  C +  +L  GK++H   
Sbjct: 218 SWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLA 277

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K  F       N L+ MY  CGDL  A  + +++   +  S W  +I   T++G    A
Sbjct: 278 IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGA 336

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I+  + M +++    D V   +++ AC        GK +H     + M  +  V NAL+ 
Sbjct: 337 IRLLQQM-EKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
           MY +C  +  A++VF +    ++ +WN MI                   E +P+  ++  
Sbjct: 396 MYTKCGSMDGANSVFSTMVVKDIISWNTMIG------------------ELKPDSRTMAC 437

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           IL AC  L  L  GK+IHG++   G+  +  +++AL+D+Y  C               K 
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W+ MIS YG HG G EAI  F+EM ++GI P + S IS+L ACSHSGL+++G +++ 
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            M  ++++ P+ EH+ C+VD+L R+G L +AYEFI+ LPI P   +WGA+L  C  + D 
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDI 617

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++ ++VAE +F+LEPEN GYY+ L+N+Y    +W++
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEE 653



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 249/547 (45%), Gaps = 81/547 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSL-----ALFYETCNKDVVTWNAMITACVENRCVVM 56
           G   H PTS +  T +S +  F S L     A    T ++ V  +NA I     + C + 
Sbjct: 29  GCFIHKPTSKA--TFFSPI--FSSCLPIRISATPTRTIDRQVTDYNAKIL----HFCQLG 80

Query: 57  GLHFFGEMVE--EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
            L    E+V   +    ++ T   ++        L  G+ VH +     +  D  L    
Sbjct: 81  NLENAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKL 140

Query: 115 VNMYAKCGDLNSSECTFSGMHCAD------------------------------------ 138
           V++YA CGDL      F  M   +                                    
Sbjct: 141 VSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 200

Query: 139 ---------------TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
                           +SWN+++SG + N   E+ L  +++M + G   D  ++ S +  
Sbjct: 201 PESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVG 260

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A  G LS GK +H+L IK  +E    ++ +N+L+ MYS+CGD++ A R F  M  ++VV
Sbjct: 261 CANSGTLSLGKAVHSLAIKSTFERR--INFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 318

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW ++I G+  +G+ + A  LL +M+    V+ D+    +++  CA S  L  G+ VH Y
Sbjct: 319 SWTSMIAGYTRDGRSDGAIRLLQQME-KEGVKLDVVATTSILHACARSGSLDNGKDVHDY 377

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
                +  +L + N+LMD Y+K  S+  A  +F+ +  + D++SWN+MI  L        
Sbjct: 378 IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV-VKDIISWNTMIGEL-------- 428

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +    T+  ILP+C S  +LE GK IH + L+ G+S++    NAL+ +Y+ CG L  A 
Sbjct: 429 -KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L   I  + D   W ++I     +G+  EAI TF  M +     PD V+ ++++ AC +
Sbjct: 488 LLFDMIP-SKDLVSWTVMISGYGMHGYGNEAIATFNEM-RDAGIEPDEVSFISILYACSH 545

Query: 484 LELAFEG 490
             L  +G
Sbjct: 546 SGLLEQG 552



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 202/441 (45%), Gaps = 50/441 (11%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           ES+  LF + C++DV++WN+MI+  V N     GL  + +M+  GI  D  T++ ++   
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGC 261

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
                L  G+ VH L+IK+      +  N  ++MY+KCGDL+ +   F  M   + VSW 
Sbjct: 262 ANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++++G   +   +  +   ++M   G + D V+ +S + A A  G L  GK +H   IK 
Sbjct: 322 SMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY-IKA 380

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
              +S  + V N+L+ MY++CG ++ A   F  M  KD++SWN +I              
Sbjct: 381 NNMESN-LFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG------------- 426

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                     ++PD  T+  ++  CA    L  G+ +HGY +R     D  + N+L+D Y
Sbjct: 427 ---------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
            K   L  A LLF+ I P  DLVSW  MISG             F EM     +    + 
Sbjct: 478 VKCGVLGLARLLFDMI-PSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFS 424
           ++IL +C+    LE G     W+       N   +   +  Y          G+L  A+ 
Sbjct: 537 ISILYACSHSGLLEQG-----WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            ++ +    D + W  ++  C
Sbjct: 591 FIETLPIAPDATIWGALLCGC 611



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 164/355 (46%), Gaps = 29/355 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S +LL  YS     + +L +F +   ++VV+W +MI     +      +    
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQ 341

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M +EG++ D      I+ A  +   L  G+ VH       M ++  +CN  ++MY KCG
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            ++ +   FS M   D +SWNT++                      GE + D+ +++  +
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACIL 439

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  GK IH   ++ GY    +V+  N+L+ +Y +CG +  A   F  +  KD
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL +G    
Sbjct: 498 LVSWTVMISGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFF 556

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y ++     +  L     ++D  S++ +LSKA      +    D   W +++ G
Sbjct: 557 -YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 155/397 (39%), Gaps = 100/397 (25%)

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           +N  I+   Q G+ + A++    +   Q +  ++ T  +V+  C   +   +GK +H + 
Sbjct: 69  YNAKILHFCQLGNLENAMEL---VCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSII 125

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIK---------------------------------- 523
             + + +D  +   L+++Y  C D+K                                  
Sbjct: 126 KSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESI 185

Query: 524 -----------------SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HL 563
                            SAS +F+   + ++ +WN MIS +  N    R LE+++   +L
Sbjct: 186 CLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYL 245

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
             + +  +I+S+L  C   G L  GK +H       F+     S+ LLDMYS C      
Sbjct: 246 GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGA 305

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    ++  +W+SMI+ Y   G+   AI L  +M   G++    +  S+L AC+ S
Sbjct: 306 LRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARS 365

Query: 669 GLVDEGLQYY-----NNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNL---- 717
           G +D G   +     NNM        E+   VC  ++DM  + G +  A      +    
Sbjct: 366 GSLDNGKDVHDYIKANNM--------ESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 718 ---------PIQPKPGVWGAMLSACSHHGDTKMGKQV 745
                     ++P       +L AC+     + GK++
Sbjct: 418 IISWNTMIGELKPDSRTMACILPACASLSALERGKEI 454


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 227/782 (29%), Positives = 372/782 (47%), Gaps = 53/782 (6%)

Query: 42   NAMITACVENRCVVMGLHFFGEMVEEGIRFDST-TLLIIVSALTQMNCLKQGRVVHCLSI 100
            N+ I A ++    +  LH + +       + S  T   ++ A + +  L  G+ +H   I
Sbjct: 529  NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSII 588

Query: 101  KAGMIADSSLCNVFVNMYAKCGDLNSSECTF-----SGMHCADTVSWNTIMSGCLHNNYP 155
              G   D  +    VNMY KCG L+ +   F     SG+   D    N+++ G       
Sbjct: 589  VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRF 648

Query: 156  EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY--GKVIHALGIKLGYEDSPYVSV 213
            ++ +  FR M   G + D  SLS  V+     G      GK IH   ++   +   ++  
Sbjct: 649  KEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKT 708

Query: 214  TNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              +LI MY + G    A R F  +  K +VV WN +I GF  +   E + +L + +    
Sbjct: 709  --ALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLEL-YMLAKSN 765

Query: 273  SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            SV+    +    +  C+ S     GR +H   ++  L  D  +  SL+  YSK   + +A
Sbjct: 766  SVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEA 825

Query: 333  ELLFNAIAPMNDLVSWNSMIS---------------GLFKEMLYLCSQFSFSTLLAILPS 377
            E +F+ +     L  WN+M++               G  ++   L   F+ S ++    S
Sbjct: 826  ETVFSCVVDKR-LEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVI----S 880

Query: 378  CNSPESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            C S   L ++GKS+H    K    +     +AL+ +Y  CG    A+ + + +    D  
Sbjct: 881  CCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEK-DMV 939

Query: 437  CWNIVIVACTQNGHFQEAIKTFKSMTQQQNA-SPDSVTLVNVISACGNLELAFEGKSLHG 495
             W  +I    +NG F+EA+K F  M    ++  PDS  + +VI+AC  LE    G  +HG
Sbjct: 940  AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHG 999

Query: 496  LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
              +K+   L+  V ++LI +Y +C   + A  VF S    N+  WN MIS +S+N     
Sbjct: 1000 SMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPEL 1059

Query: 556  ALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
            ++ELF  +  +   P+ +SI S+L A +    L  GK +HG+   LG   ++ + +AL+D
Sbjct: 1060 SIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALID 1119

Query: 613  MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
            MY  C               KS   W+ MI  YG HG    A+ LF E+  +G  P   +
Sbjct: 1120 MYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVT 1179

Query: 658  VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
             +SL+SAC+HSG V+EG  ++  M ++Y + P+ EH+  +VD+LGR+G+L+EAY FIK +
Sbjct: 1180 FLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAM 1239

Query: 718  PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
            P +    +W  +LSA   H + ++G   AE L ++EPE    Y+ L N+Y+  G   +A 
Sbjct: 1240 PTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAA 1299

Query: 778  EI 779
            ++
Sbjct: 1300 KL 1301



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 199/746 (26%), Positives = 346/746 (46%), Gaps = 60/746 (8%)

Query: 10   STSLLTAYSNVSYFESSLALF-----YETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
            +TSL+  Y    + + ++ +F          +DV   N+MI    + R    G+  F  M
Sbjct: 599  ATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRM 658

Query: 65   VEEGIRFDSTTLLIIVSALTQMNCLKQ--GRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            +  G+R D+ +L I+VS L +    ++  G+ +H   ++  +  DS L    ++MY K G
Sbjct: 659  LVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFG 718

Query: 123  DLNSSECTFSGMH-CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                +   F  +   ++ V WN ++ G   +   E  L  +     +  +  + S + A+
Sbjct: 719  LSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGAL 778

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             A +     ++G+ IH   +K+G ++ PYVS   SL+SMYS+CG +  AE  F  +  K 
Sbjct: 779  GACSQSENSAFGRQIHCDVVKMGLDNDPYVS--TSLLSMYSKCGMVGEAETVFSCVVDKR 836

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            +  WNA++  +  N     A +L   M+  +SV PD  T+  +IS C+   L   G+SVH
Sbjct: 837  LEIWNAMVAAYVENDNGYSALELFGFMR-QKSVLPDSFTLSNVISCCSMFGLYDYGKSVH 895

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
                +R +     + ++L+  YSK    + A L+F ++    D+V+W S+ISGL     F
Sbjct: 896  AELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEE-KDMVAWGSLISGLCKNGKF 954

Query: 357  KEMLYLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
            KE L +                 + +++ +C   E+L FG  +H   +K G   N    +
Sbjct: 955  KEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGS 1014

Query: 408  ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            +L+ +Y  CG    A  +   +    +   WN +I   ++N   + +I+ F  M   Q  
Sbjct: 1015 SLIDLYSKCGLPEMALKVFTSM-RPENIVAWNSMISCYSRNNLPELSIELFNLML-SQGI 1072

Query: 468  SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             PDSV++ +V+ A  +     +GKSLHG  L+  +  DT ++NALI MY +C   K A  
Sbjct: 1073 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 1132

Query: 528  VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGV 584
            +F+   + +L TWN MI  +  +     AL LF  L+     P++++ +S++SAC   G 
Sbjct: 1133 IFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGF 1192

Query: 585  LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
            +  GK    + F +  Q+        ++ Y+N         M+   G  G+  EA     
Sbjct: 1193 VEEGK----NFFEIMKQDYGI--EPKMEHYAN---------MVDLLGRAGRLEEAYSFIK 1237

Query: 645  EMCNSGIRPTK--SSV-ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
             M      PT+  SS+ + LLSA      V+ G+     +L     R  T  +V ++++ 
Sbjct: 1238 AM------PTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGST--YVQLINLY 1289

Query: 702  GRSGKLQEAYEFI---KNLPIQPKPG 724
              +G   EA + +   K   +Q +PG
Sbjct: 1290 MEAGLKNEAAKLLGEMKERGLQKQPG 1315



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 309/641 (48%), Gaps = 31/641 (4%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
            T+L+  Y        +  +F E  +K +VV WN MI     +      L  +       +
Sbjct: 708  TALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSV 767

Query: 70   RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            +  ST+    + A +Q      GR +HC  +K G+  D  +    ++MY+KCG +  +E 
Sbjct: 768  KLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAET 827

Query: 130  TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             FS +       WN +++  + N+     L  F  M       D+ +LS+ ++  +  G 
Sbjct: 828  VFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGL 887

Query: 190  LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              YGK +HA   K   + +P  ++ ++L+++YS+CG    A   F  M  KD+V+W ++I
Sbjct: 888  YDYGKSVHAELFKRPIQSTP--AIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLI 945

Query: 250  DGFALNGKFEEAFDLLHEMQ-LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
             G   NGKF+EA  +  +M+    S++PD   + ++I+ CA    L  G  VHG  I+  
Sbjct: 946  SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTG 1005

Query: 309  LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
               ++ + +SL+D YSK      A  +F ++ P N +V+WNSMIS             LF
Sbjct: 1006 QVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPEN-IVAWNSMISCYSRNNLPELSIELF 1064

Query: 357  KEMLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
              ML   SQ  F    ++ ++L + +S  SL  GKS+H + L+LG  ++T   NAL+ MY
Sbjct: 1065 NLML---SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMY 1121

Query: 414  INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            + CG    A ++ +++ H S  + WN++I     +G  + A+  F  + ++   +PD VT
Sbjct: 1122 VKCGFSKYAENIFKKMQHKSLIT-WNLMIYGYGSHGDCRTALSLFDEL-KKAGETPDDVT 1179

Query: 474  LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
             +++ISAC +     EGK+   + +K   G++ ++++   ++ + GR   ++ A +  ++
Sbjct: 1180 FLSLISACNHSGFVEEGKNFFEI-MKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKA 1238

Query: 532  C-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISI-VSILSACTQLGVLRHG 588
                 +   W C++SA  + +  E+  L   + L  EP   S  V +++   + G+    
Sbjct: 1239 MPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEA 1298

Query: 589  KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISA 629
             ++ G +   G Q+    S   +   SN   +   SS I A
Sbjct: 1299 AKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKA 1339



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 215/480 (44%), Gaps = 43/480 (8%)

Query: 244  SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
            S N+ I      G++ +A  L  +      +   + T  +L+  C+    L  G+++HG 
Sbjct: 527  SVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGS 586

Query: 304  AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA----PMNDLVSWNSMISGLFK-- 357
             I     YD  +  SL++ Y K   L  A  +F+  +       D+   NSMI G FK  
Sbjct: 587  IIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFR 646

Query: 358  ----------EMLYLCSQ---FSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSNNT 403
                       ML L  +   FS S ++++L  C       E GK IH + L+     ++
Sbjct: 647  RFKEGVGCFRRMLVLGVRPDAFSLSIVVSVL--CKEGNFRREDGKQIHGYMLRNSLDGDS 704

Query: 404  IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                AL+ MY   G    A+ +   I   S+   WN++IV    +   + +++ +  + +
Sbjct: 705  FLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYM-LAK 763

Query: 464  QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
              +    S +    + AC   E +  G+ +H   +K  +  D  V  +L++MY +C  + 
Sbjct: 764  SNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVG 823

Query: 524  SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACT 580
             A TVF    +  L  WN M++A+ +N     ALELF   R     P+  ++ +++S C+
Sbjct: 824  EAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCS 883

Query: 581  QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
              G+  +GK +H  +F    Q    I SALL +YS C               K   AW S
Sbjct: 884  MFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGS 943

Query: 626  MISAYGYHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            +IS    +GK  EA+++F +M   +  ++P    + S+++AC+    +  GLQ + +M++
Sbjct: 944  LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIK 1003


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 168/557 (30%), Positives = 302/557 (54%), Gaps = 37/557 (6%)

Query: 255 NGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            G+ +EA  +++ M L  + V  D+     L+  CA    L +GR VH   ++  +  + 
Sbjct: 25  TGRLKEALGIMNTMILQGTRVYSDVFR--GLLQECARLRSLEQGREVHAAILKSGIQPNR 82

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLY 361
            + N+L+  Y+K  SL+ A  +F++I   N +VSW +MI               ++ M  
Sbjct: 83  YLENTLLSMYAKCGSLTDARRVFDSIRDRN-IVSWTAMIEAFVAGNKNLEAFKCYETMKL 141

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              +    T +++L +  +PE L+ G+ +H   ++ G         +L+ MY  CGD+  
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  R+    +   W ++I    Q G    A++  ++M QQ   +P+ +T  +++  C
Sbjct: 202 ARVIFDRLPEK-NVVTWTLLIAGYAQQGQVDVALELLETM-QQAEVAPNKITFASILQGC 259

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                   GK +H   ++S  G +  V N+LITMY +C  ++ A  +F    + ++ TW 
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWT 319

Query: 542 CMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            M++ ++Q      A+ LFR ++    +P++++  S+L++C+    L+ GK+IH  + H 
Sbjct: 320 AMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA 379

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY-GYHGKGWEAIEL 642
           G+  + ++ SAL+ MY+ C               ++  AW+++I+     HG+  EA+E 
Sbjct: 380 GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEY 439

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M   GI+P K +  S+LSAC+H GLV+EG +++ +M  +Y ++P  EH+ C VD+LG
Sbjct: 440 FDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 499

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G L+EA   I ++P  P P VWGA+LSAC  H D + G++ AE + KL+P++ G Y++
Sbjct: 500 RAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVA 559

Query: 763 LSNMYVALGRWKDAVEI 779
           LS++Y A GR++DA ++
Sbjct: 560 LSSIYAAAGRYEDAEKV 576



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/505 (28%), Positives = 244/505 (48%), Gaps = 21/505 (4%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L     M+ +G R  S     ++    ++  L+QGR VH   +K+G+  +  L N  ++
Sbjct: 31  ALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLS 90

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYAKCG L  +   F  +   + VSW  ++   +  N   +    +  M  +G + D V+
Sbjct: 91  MYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVT 150

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + A      L  G+ +H   ++ G E  P V    SL+ MY++CGDI  A   F  
Sbjct: 151 FVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKCGDISKARVIFDR 208

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  K+VV+W  +I G+A  G+ + A +LL  MQ    V P+  T  +++  C     L  
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQ-QAEVAPNKITFASILQGCTTPAALEH 267

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ VH Y I+   G +L ++NSL+  Y K   L +A  LF+ + P  D+V+W +M++G  
Sbjct: 268 GKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL-PHRDVVTWTAMVTGYA 326

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF+ M     +    T  ++L SC+SP  L+ GK IH   +  G++ +  
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVY 386

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +AL+ MY  CG +  A  +  ++S  +  +   I+   C Q+G  +EA++ F  M ++
Sbjct: 387 LQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQM-KK 445

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           Q   PD VT  +V+SAC ++ L  EG+  H  ++    G+   V++    + + GR   +
Sbjct: 446 QGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 504

Query: 523 KSASTVFESC-YNCNLCTWNCMISA 546
           + A  V  S  +      W  ++SA
Sbjct: 505 EEAENVILSMPFIPGPSVWGALLSA 529



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 225/494 (45%), Gaps = 25/494 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL+ Y+       +  +F    ++++V+W AMI A V     +     +  M   G + 
Sbjct: 87  TLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKP 146

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T + +++A T    L+ G+ VH   ++AG+  +  +    V MYAKCGD++ +   F
Sbjct: 147 DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIF 206

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   + V+W  +++G       +  L     M  +    + ++ +S +        L 
Sbjct: 207 DRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALE 266

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +H   I+ GY    +  V NSLI+MY +CG +E A + F  +  +DVV+W A++ G
Sbjct: 267 HGKKVHRYIIQSGYGRELW--VVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG 324

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A  G  +EA +L   MQ  + ++PD  T  ++++ C+    L+EG+ +H   +      
Sbjct: 325 YAQLGFHDEAINLFRRMQ-QQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL 383

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKE 358
           D+ + ++L+  Y+K  S+  A L+FN ++  N +V+W ++I+G              F +
Sbjct: 384 DVYLQSALVSMYAKCGSMDDASLVFNQMSERN-VVAWTAIITGCCAQHGRCREALEYFDQ 442

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           M     +    T  ++L +C     +E G K      L  G        +  + +    G
Sbjct: 443 MKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAG 502

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VT 473
            L  A +++  +      S W  ++ AC  +   +   +  +++ +     PD     V 
Sbjct: 503 HLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLK---LDPDDDGAYVA 559

Query: 474 LVNVISACGNLELA 487
           L ++ +A G  E A
Sbjct: 560 LSSIYAAAGRYEDA 573



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 165/350 (47%), Gaps = 13/350 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y+       +  +F     K+VVTW  +I    +   V + L     M +  + 
Sbjct: 187 TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVA 246

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   I+   T    L+ G+ VH   I++G   +  + N  + MY KCG L  +   
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS +   D V+W  +++G     + ++ +  FR M   G + D ++ +S + + +    L
Sbjct: 307 FSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFL 366

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   +  GY    Y+   ++L+SMY++CG ++ A   F  M+ ++VV+W AII 
Sbjct: 367 QEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIIT 424

Query: 251 G-FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHGYA 304
           G  A +G+  EA +   +M+  + ++PD  T  +++S C    L+ EGR         Y 
Sbjct: 425 GCCAQHGRCREALEYFDQMK-KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYG 483

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           I+ ++ +     +  +D   ++  L +AE +  ++  +     W +++S 
Sbjct: 484 IKPMVEH----YSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSA 529



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 2/237 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L    SL+T Y      E +  LF +  ++DVVTW AM+T   +       ++ F
Sbjct: 279 GYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLF 338

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M ++GI+ D  T   ++++ +    L++G+ +H   + AG   D  L +  V+MYAKC
Sbjct: 339 RRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKC 398

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G ++ +   F+ M   + V+W  I++G C  +    + L YF +M   G + D V+ +S 
Sbjct: 399 GSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSV 458

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           ++A   +G +  G+  H   + L Y   P V   +  + +  + G +E AE     M
Sbjct: 459 LSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM 514


>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
 gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
          Length = 720

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 198/732 (27%), Positives = 356/732 (48%), Gaps = 55/732 (7%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           + A   +  L  GR VH    + G  +D  L N  +NMY+KC     +   F GM   D+
Sbjct: 1   LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDS 60

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG------ELSYG 193
           VSWNT+++    N + E+ +  F EM   G   D  +L SA+    C G       L  G
Sbjct: 61  VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISAL--DGCCGLSCPDRGLKKG 118

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + IH     +G+     V++   LI MY + G++  A R F GM+ +  ++W  +I  + 
Sbjct: 119 REIHRRIQSIGFMSD--VALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYG 176

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            NG   EA +L  ++ ++    PD     +++  C+ ++ L EG+ +H   +      D 
Sbjct: 177 QNGFGNEAIELYKQIDVV----PDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDT 232

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMIS------------GLFKEML 360
           ++ N+L+D Y     L +A+ +F+++     D+VSWNS+I             GLF EM 
Sbjct: 233 VVNNTLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQ 292

Query: 361 YLCS-QFSFSTLLAILPSCNS--PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
             C  +    + ++ L +C++   + L  GK++H   L      +     AL+ MY  CG
Sbjct: 293 EACGPRQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCG 352

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D+V A  +   +  + +   W  +I   + NG  +EA++ F+ M +Q+    D +  V V
Sbjct: 353 DVVEAKQVFD-VMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKM-EQEGCRADKIVYVAV 410

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + A   +E       +H    +     D+ +Q++LI M+G+C  +++A  VF++    + 
Sbjct: 411 MEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSR 470

Query: 538 CT--WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
            +  WN MI+A+S+   +   LELF+ ++     P+  + + +L+              H
Sbjct: 471 GSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSFSPSEASAVQH 530

Query: 593 GHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGW 637
             +   G + +S + +ALL+  +               + +   +W+SM+ AY  HG   
Sbjct: 531 A-ILSTGMETDSLVGTALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSL 589

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EAI+LF EM   G+ P + + +++L AC+H+G    G  Y+ +M  +YD+    +H+ C+
Sbjct: 590 EAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCCV 649

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G+L +A + I ++P +P    W A++ AC+ HGD +   +++  +     E  
Sbjct: 650 VDLLGRAGRLADAEDLIVSMPFKPDEATWSALVGACNTHGDVERAARISRAMEA--EERA 707

Query: 758 GYYISLSNMYVA 769
             ++SL N +VA
Sbjct: 708 ATHVSLCNTFVA 719



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/611 (24%), Positives = 286/611 (46%), Gaps = 32/611 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  YS  S    +  +F     +D V+WN MI     N      +  F
Sbjct: 24  GFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSWNTMIATYARNGFGEEAVEVF 83

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNC----LKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            EM   GI  D  TL+  +     ++C    LK+GR +H      G ++D +L    + M
Sbjct: 84  HEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGREIHRRIQSIGFMSDVALQTGLIKM 143

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G++  +   F GM     ++W  +++    N +  + +  ++++       D V  
Sbjct: 144 YGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGFGNEAIELYKQIDVV---PDKVIF 200

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S + A +    L  GK IHA  ++  +E    V+  N+L+ +Y  CG +E A+  F  M
Sbjct: 201 ASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVN--NTLLDLYGMCGCLEEAKAVFHSM 258

Query: 238 --TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLL 293
               +DVVSWN+II     N + +EA  L  EMQ       D  + V+ +  C+   S  
Sbjct: 259 QEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMGSDG 318

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G+++HG  +   +  D+ +  +L+  Y +   + +A+ +F+ + P  + V+W SMI 
Sbjct: 319 LVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFD-VMPSKNAVTWTSMIR 377

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            +F++M     +      +A++ +    E ++    IH    +LG+ +
Sbjct: 378 GYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDVKMAAKIHSRLSELGWCS 437

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKS 460
           ++   ++L+ M+  CG + AA  +   +   S  S  WN +I A ++ G  +  ++ F++
Sbjct: 438 DSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQA 497

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M Q  +  PD  T + +++  G+   + E  ++    L + M  D+ V  AL+    R  
Sbjct: 498 M-QAASVRPDRATFLGLLAVGGSFSPS-EASAVQHAILSTGMETDSLVGTALLNTLTRSG 555

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILS 577
            +  A  VF+     ++ +W  M+ A++ + + + A++LF+ ++    EP+E++ +++L 
Sbjct: 556 KVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLF 615

Query: 578 ACTQLGVLRHG 588
           AC   G  R G
Sbjct: 616 ACNHAGFFRRG 626



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 13/348 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+T Y        +  +F    +K+ VTW +MI     N      +  F +M +EG R
Sbjct: 342 TALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCR 401

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D    + ++ A   +  +K    +H    + G  +DS++ +  + M+ KCG + ++   
Sbjct: 402 ADKIVYVAVMEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRV 461

Query: 131 FSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  M      + +WN +++        E  L  F+ M  +  + D  +    +A      
Sbjct: 462 FDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSFS 521

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
                 V HA+ +  G E    V    +L++  ++ G +  A R F  +  +DVVSW ++
Sbjct: 522 PSEASAVQHAI-LSTGMETDSLVG--TALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSM 578

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +  +A +G   EA DL  EMQL + +EPD    + ++  C  +   R G     Y     
Sbjct: 579 MVAYASHGSSLEAIDLFQEMQL-QGMEPDEVAFLAVLFACNHAGFFRRGWD---YFASMR 634

Query: 309 LGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             YDL         ++D   ++  L+ AE L  ++    D  +W++++
Sbjct: 635 GDYDLEAGADHYCCVVDLLGRAGRLADAEDLIVSMPFKPDEATWSALV 682



 Score = 40.4 bits (93), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 10/180 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL   +       +  +F     +DVV+W +M+ A   +   +  +  F EM  +G+ 
Sbjct: 545 TALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGME 604

Query: 71  FDSTTLLIIVSALTQMNCLKQG-----RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            D    L ++ A       ++G      +     ++AG  AD   C   V++  + G L 
Sbjct: 605 PDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAG--ADHYCC--VVDLLGRAGRLA 660

Query: 126 SSECTFSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
            +E     M    D  +W+ ++  C  +   E+     R M      A +VSL +   A+
Sbjct: 661 DAEDLIVSMPFKPDEATWSALVGACNTHGDVERAARISRAMEAEERAATHVSLCNTFVAA 720


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 210/649 (32%), Positives = 324/649 (49%), Gaps = 45/649 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G   D+V+ +  V  S   G L +GK+ H   IK  ++  P + + N+L+ MY +CG+ +
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFK--PCLFLLNNLLYMYCKCGETD 71

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A++ F  M  ++VVSWN++I G+   G + E  +L  E + M  +  D  T    +S+C
Sbjct: 72  VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEAR-MSDLRLDKFTFSNALSVC 130

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
             +L LR GR +H       LG  +L+ NSL+D Y K   +  A L+F +   + D VSW
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL-DSVSW 189

Query: 349 NSMISGLFK-----EMLYLCSQ-------FSFSTLLAILPSCNS--PESLEFGKSIHCWQ 394
           NS+I+G  +     EML L  +        +   L + L +C S    S+E GK +H   
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ-----NG 449
           +KLG   + +   AL+  Y   GDL  A  +  ++  + +   +N +I    Q     + 
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIF-KLMPDPNVVMYNAMIAGFLQMETMADE 308

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRV 508
              EA+  F  M Q +   P   T  +++ AC  +E AFE GK +H    K  +  D  +
Sbjct: 309 FANEAMYLFFEM-QSRGMKPSEFTFSSILKACSTIE-AFECGKQIHAQIFKYNLQSDEFI 366

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF--- 565
            NAL+ +Y     I+     F S    ++ +W  +I    QN      L LF  L F   
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 426

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           +P+E +I  +LSAC  L  ++ G+QIH +    G    + I ++ + MY+ C        
Sbjct: 427 KPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANM 486

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                      +WS MIS+   HG   EA++LF  M  SGI P   + + +L ACSH GL
Sbjct: 487 TFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGL 546

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V+EGL+Y+  M +++ + P  +H  CIVD+LGR+G+L EA  FI +   +  P +W ++L
Sbjct: 547 VEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLL 606

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           SAC  H  T  GK+VAE + +LEPE    Y+ L N+Y   G    A EI
Sbjct: 607 SACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEI 655



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 189/696 (27%), Positives = 318/696 (45%), Gaps = 77/696 (11%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+  DS T   +V   T+   L  G++ H   IK        L N  + MY KCG+ + +
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F  M   + VSWN+++SG     +  + +  F+E   S  + D  + S+A++     
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +L  G++IHAL I +     P V +TNSLI MY +CG I+ A   F      D VSWN+
Sbjct: 134 LDLRLGRLIHAL-ITVSGLGGP-VLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAI 305
           +I G+   G  +E   LL +M L   +  +   + + +  C  +    +  G+ +HG A+
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKM-LRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-------- 357
           +  L  D+++  +L+D Y+K   L  A  +F  + P  ++V +N+MI+G  +        
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFK-LMPDPNVVMYNAMIAGFLQMETMADEF 309

Query: 358 --EMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
             E +YL           S+F+FS+   IL +C++ E+ E GK IH    K    ++   
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSS---ILKACSTIEAFECGKQIHAQIFKYNLQSDEFI 366

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NAL+ +Y   G +          +   D   W  +IV   QNG F+  +  F  +    
Sbjct: 367 GNALVELYSLSGSIEDGLKCFHS-TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELL-FS 424

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD  T+  ++SAC NL     G+ +H  A+K+ +G  T +QN+ I MY +C DI SA
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 484

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
           +  F+   N ++ +W+ MIS+ +Q+     A++LF  ++     PN I+ + +L AC+  
Sbjct: 485 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 544

Query: 583 GVLRHG-------KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK 635
           G++  G       K+ H      G   N   S+ ++D+       A   S I   G+ G 
Sbjct: 545 GLVEEGLRYFEIMKKDH------GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 598

Query: 636 G--WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TE 692
              W                      SLLSAC      D G +    ++E   + PE   
Sbjct: 599 PVMWR---------------------SLLSACRVHKATDTGKRVAERVIE---LEPEAAA 634

Query: 693 HHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPGV 725
            +V + ++   +G    A E    +K+  ++ +PG+
Sbjct: 635 SYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGL 670



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 282/579 (48%), Gaps = 30/579 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y      + +  LF     ++VV+WN++I+   +       ++ F E     +R 
Sbjct: 59  NLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRL 118

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T    +S   +   L+ GR++H L   +G+     L N  ++MY KCG ++ +   F
Sbjct: 119 DKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVF 178

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGE 189
                 D+VSWN++++G +     ++ L    +M   G   ++ +L SA+ A  S     
Sbjct: 179 ESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSS 238

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +  GK++H   +KLG +    V V  +L+  Y++ GD+E A + F  M   +VV +NA+I
Sbjct: 239 IECGKMLHGCAVKLGLDLD--VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 296

Query: 250 DGF----ALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            GF     +  +F  EA  L  EMQ  R ++P   T  +++  C+       G+ +H   
Sbjct: 297 AGFLQMETMADEFANEAMYLFFEMQ-SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQI 355

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            +  L  D  + N+L++ YS S S+      F++  P  D+VSW S+I G          
Sbjct: 356 FKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS-TPKLDVVSWTSLIVGHVQNGQFEGG 414

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF E+L+   +    T+  +L +C +  +++ G+ IH + +K G  N TI  N+ + M
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 474

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CGD+ +A ++  + + N D   W+++I +  Q+G  +EA+  F+ M +    +P+ +
Sbjct: 475 YAKCGDIDSA-NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELM-KGSGIAPNHI 532

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRC-RDIKSASTVF 529
           T + V+ AC +  L  EG     + +K   G+   V+++  ++ + GR  R  ++ S + 
Sbjct: 533 TFLGVLVACSHGGLVEEGLRYFEI-MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIM 591

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEFEP 567
           +S +  +   W  ++SA   +KA      +  R +E EP
Sbjct: 592 DSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEP 630



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 21/356 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-----MGLHFFGEMV 65
           T+LL  Y+ +   E +  +F    + +VV +NAMI   ++   +        ++ F EM 
Sbjct: 262 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 321

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             G++    T   I+ A + +   + G+ +H    K  + +D  + N  V +Y+  G + 
Sbjct: 322 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 381

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
                F      D VSW +++ G + N   E  L  F E+ +SG + D  ++S  ++A A
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L  +  G+ IHA  IK G  +  +  + NS I MY++CGDI++A   F      D+VSW
Sbjct: 442 NLAAVKSGEQIHAYAIKTGIGN--FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 499

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-------R 298
           + +I   A +G  +EA DL  E+     + P+  T + ++  C+   L+ EG       +
Sbjct: 500 SVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMK 558

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             HG      +  ++     ++D   ++  L++AE          D V W S++S 
Sbjct: 559 KDHG------ITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 608


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 189/627 (30%), Positives = 320/627 (51%), Gaps = 45/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L   K +H   +K  + +   + + N +   YS+C DI+AA R F  M+ ++  SW  +I
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G A NG F + F+   EMQ  + + PD      ++ +C     +  G  VH   + R  
Sbjct: 144 AGLAENGLFLDGFEFFCEMQ-SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGF 202

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
                +  +L++ Y+K   +  +  +FN +  +N +VSWN+MI+G     LYL +   F 
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN-VVSWNAMITGFTSNDLYLDA---FD 258

Query: 370 TLLAILPSCNSPESLEF---------------GKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             L ++    +P++  F                K +  + L+LG  +NT+   AL+ M  
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNS 318

Query: 415 NCGDLVAAFSLLQRISHNSD---TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            CG L  A S+    SH       + WN +I    ++G  ++A++ F  M Q  +   D 
Sbjct: 319 KCGSLQEARSIFN--SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN-DIYLDH 375

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLD-TRVQNALITMYGRCRDIKSASTVFE 530
            T  +V +A   L+    GK +H  A+KS + ++   + NA+   Y +C  ++    VF 
Sbjct: 376 YTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFN 435

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
              + +L +W  +++A+SQ     +A+E+F ++  E   PN+ +  S+L +C  L +L +
Sbjct: 436 RMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEY 495

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCK------------SNA---AWSSMISAYGY 632
           G+Q+HG +  +G   +  I SAL+DMY+ C             SNA   +W+++I+ +  
Sbjct: 496 GQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQ 555

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG   +A++LF  M   G+ P   + + +L ACSH GLV+EGLQY+  M + Y + PE E
Sbjct: 556 HGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEME 615

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ CIVD+L R G L +A EFI  +P++P   VW  +L AC  HG+ ++G+  A+ +   
Sbjct: 616 HYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSF 675

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
           + EN   Y+ LSN Y+  G +KD + +
Sbjct: 676 KAENSATYVLLSNTYIESGSYKDGLSL 702



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 249/521 (47%), Gaps = 24/521 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           LKQ + VH   +K+      SL   N   + Y+KC D++++   F  M   +T SW  ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
           +G   N        +F EM   G   D  + S  +     L  +  G ++HA  +  G+ 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              +VS   +L++MY++  +IE + + F  MT  +VVSWNA+I GF  N  + +AFDL  
Sbjct: 204 SHTFVS--TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFL 261

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            M +   V PD  T + +         + + + V GYA+   +  + L+  +L+D  SK 
Sbjct: 262 RM-MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKC 320

Query: 327 NSLSKAELLFNA-IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
            SL +A  +FN+          WN+MISG            LF +M          T  +
Sbjct: 321 GSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCS 380

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHN 432
           +  +  + + L  GK +H   +K G   N + + NA+ + Y  CG L     +  R+  +
Sbjct: 381 VFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM-ED 439

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  ++ A +Q   + +AI+ F +M + +  +P+  T  +V+ +C NL L   G+ 
Sbjct: 440 RDLISWTSLVTAYSQCSEWDKAIEIFSNM-RAEGIAPNQFTFSSVLVSCANLCLLEYGQQ 498

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HG+  K  + +D  +++AL+ MY +C  +  A  VF    N +  +W  +I+  +Q+  
Sbjct: 499 VHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGI 558

Query: 553 EVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQ 590
              AL+LFR    L  EPN ++ + +L AC+  G++  G Q
Sbjct: 559 VDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQ 599



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 234/473 (49%), Gaps = 30/473 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF +H   ST+LL  Y+ +   E S  +F      +VV+WNAMIT    N   +     
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ EG+  D+ T + +  A+  +  + + + V   +++ G+ +++ +    ++M +K
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSK 319

Query: 121 CGDLNSSECTFSG--MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           CG L  +   F+   + C     WN ++SG L + + EK L  F +M  +    D+ +  
Sbjct: 320 CGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYC 379

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S   A A L  LS GK +HA  IK G E + YVS++N++ + Y++CG +E   + F  M 
Sbjct: 380 SVFNAIAALKCLSLGKKVHARAIKSGLEVN-YVSISNAVANAYAKCGSLEDVRKVFNRME 438

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D++SW +++  ++   ++++A ++   M+    + P+  T  +++  CA+  LL  G+
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIFSNMR-AEGIAPNQFTFSSVLVSCANLCLLEYGQ 497

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VHG   +  L  D  + ++L+D Y+K   L  A+ +FN I+   D VSW ++I+G    
Sbjct: 498 QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQH 556

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF+ M+ L  + +  T L +L +C+    +E G  +  ++L       T G+
Sbjct: 557 GIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG--LQYFKLM----KKTYGL 610

Query: 407 NALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              M  Y    DL++       A   + R+    +   W  ++ AC  +G+ +
Sbjct: 611 VPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 269/599 (44%), Gaps = 69/599 (11%)

Query: 16  AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTT 75
           AYS  S  +++  LF +   ++  +W  +I    EN   + G  FF EM  +GI  D   
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
              I+     ++ ++ G +VH   +  G  + + +    +NMYAK  ++  S   F+ M 
Sbjct: 174 YSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233

Query: 136 CADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
             + VSWN +++G   N+ Y +   L+ R MG  G   D  +      A   L +++  K
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAK 292

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGF 252
            +    ++LG + +  V    +LI M S+CG ++ A   F    +TC+    WNA+I G+
Sbjct: 293 EVSGYALELGVDSNTLVG--TALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGY 350

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G  E+A +L  +M     +  D  T  ++ +  A    L  G+ VH  AI+  L  +
Sbjct: 351 LRSGFNEKALELFAKM-CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409

Query: 313 LL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            + + N++ + Y+K  SL     +FN +    DL+SW S+++             +F  M
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDKAIEIFSNM 468

Query: 360 L---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  +QF+FS+   +L SC +   LE+G+ +H    K+G   +    +AL+ MY  C
Sbjct: 469 RAEGIAPNQFTFSS---VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKC 525

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  +  RIS N+DT  W  +I    Q+G   +A++ F+ M  Q    P++VT + 
Sbjct: 526 GCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMV-QLGVEPNAVTFLC 583

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC +  L  EG     L  K+               YG   +++             
Sbjct: 584 VLFACSHGGLVEEGLQYFKLMKKT---------------YGLVPEMEH------------ 616

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
              + C++   S+      A+E    +  EPNE+   ++L AC          ++HG+V
Sbjct: 617 ---YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC----------RVHGNV 662



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 262/576 (45%), Gaps = 83/576 (14%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLG--YDLLMMNSLMDFYSKSNSLSKAELL 335
           I  +V L+  C D+  L++ ++VHG+ ++      + L+++N +   YSK + +  A  L
Sbjct: 68  IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYL---------------CSQFSFSTLLAILPSCNS 380
           F+ ++  N   SW  +I+GL +  L+L                 QF++S +L I   C  
Sbjct: 128 FDQMSQRNTF-SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI---CIG 183

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            +S+E G  +H   +  GF+++T    AL++MY    ++  ++ +   ++  +  S WN 
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVS-WNA 242

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I   T N  + +A   F  M   +  +PD+ T + V  A G L    + K + G AL+ 
Sbjct: 243 MITGFTSNDLYLDAFDLFLRM-MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALEL 301

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNL-CTWNCMISAFSQNKAEVRALE 558
            +  +T V  ALI M  +C  ++ A ++F S +  C     WN MIS + ++    +ALE
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALE 361

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALLDMY 614
           LF  +   +   +  +  S+ +A   L  L  GK++H      G + N   IS+A+ + Y
Sbjct: 362 LFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAY 421

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               +   +W+S+++AY    +  +AIE+F  M   GI P + +  
Sbjct: 422 AKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFS 481

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA--------- 710
           S+L +C++  L++ G Q +  ++ +  +  +      +VDM  + G L +A         
Sbjct: 482 SVLVSCANLCLLEYGQQVH-GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISN 540

Query: 711 -------------------------YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
                                    +  +  L ++P    +  +L ACSH G  + G Q 
Sbjct: 541 ADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQY 600

Query: 746 AELLFK---LEPENVGYYISLSNMYVALGRWKDAVE 778
            +L+ K   L PE + +Y  + ++   +G   DA+E
Sbjct: 601 FKLMKKTYGLVPE-MEHYACIVDLLSRVGHLNDAME 635



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 24/310 (7%)

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN--TIGVNALMHMYINCGDLVA 421
           S      L+ +L  C     L+  K++H + LK  FSN+   + +N + H Y  C D+ A
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  L  ++S   +T  W ++I    +NG F +  + F  M Q Q   PD      ++  C
Sbjct: 124 ACRLFDQMSQR-NTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQIC 181

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             L+    G  +H   +       T V  AL+ MY + ++I+ +  VF +    N+ +WN
Sbjct: 182 IGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWN 241

Query: 542 CMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MI+ F+ N   + A +LF  +  E   P+  + + +  A   L  +   K++ G+   L
Sbjct: 242 AMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALEL 301

Query: 599 GFQENSFISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKGWEAIE 641
           G   N+ + +AL+DM S C S                 NA W++MIS Y   G   +A+E
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALE 361

Query: 642 LFHEMCNSGI 651
           LF +MC + I
Sbjct: 362 LFAKMCQNDI 371


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 182/570 (31%), Positives = 300/570 (52%), Gaps = 53/570 (9%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DV +WN +I G+   G   E         L   + PD  T  +++  C   +   +G  
Sbjct: 48  RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNK 104

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +H  A++    +D+ +  SL+  YS+  ++  A +LF+ + P+ D+ SWN+MISG     
Sbjct: 105 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM-PVRDMGSWNAMISGYCQSG 163

Query: 356 -FKEMLYLCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG--VNAL 409
             KE L L +        T++++L +C        G +IH + +K G  +  +       
Sbjct: 164 NAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVF 223

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
             MY+   DL++                WN +I A   N     AI  F+ M +     P
Sbjct: 224 DRMYVR--DLIS----------------WNSIIKAYELNEQPLRAISLFQEM-RLSRIQP 264

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTV 528
           D +TL+++ S    L      +S+ G  L+    L D  + NA++ MY +   + SA  V
Sbjct: 265 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 324

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGV 584
           F    N ++ +WN +IS ++QN     A+E++  +E E     N+ + VS+L AC+Q G 
Sbjct: 325 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 384

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISA 629
           LR G ++HG +   G   + F+ ++L DMY  C                ++  W+++I+ 
Sbjct: 385 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 444

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           +G+HG G +A+ LF EM + G++P   + ++LLSACSHSGLVDEG   +  M  +Y + P
Sbjct: 445 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 504

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
             +H+ C+VDM GR+G+L+ A +FIK++ +QP   +WGA+LSAC  HG+  +GK  +E L
Sbjct: 505 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 564

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           F++EPE+VGY++ LSNMY + G+W+   EI
Sbjct: 565 FEVEPEHVGYHVLLSNMYASAGKWEGVDEI 594



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 168/665 (25%), Positives = 292/665 (43%), Gaps = 112/665 (16%)

Query: 14  LTAYSNVSYFESSLALFYETCNKDVVTWNAMITA---CVENRCVVMGLHFFGEMVEEGIR 70
           ++ + ++S  +S +  F    N+DV  WN MI+       +  V+     F  M+  G+ 
Sbjct: 26  VSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLT 83

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T     S L     +  G  +HCL++K G + D  +    +++Y++   + ++   
Sbjct: 84  PDYRTF---PSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 140

Query: 131 FSGMHCADTVSWNTIMSG-CLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACL 187
           F  M   D  SWN ++SG C   N  E   L    R M       D+V++ S ++A    
Sbjct: 141 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEA 193

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+ + G  IH+  IK G E             +   C      ++ F  M  +D++SWN+
Sbjct: 194 GDFNRGVTIHSYSIKHGLES-----------ELLRDC------QKVFDRMYVRDLISWNS 236

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II  + LN +   A  L  EM+L R ++PD  T+++L S+ +    +R  RSV G+ +R+
Sbjct: 237 IIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 295

Query: 308 LLGY---DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK------- 357
             G+   D+ + N+++  Y+K   +  A  +FN + P  D++SWN++ISG  +       
Sbjct: 296 --GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL-PNTDVISWNTIISGYAQNGFASEA 352

Query: 358 -EMLYLCSQ-----FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            EM  +  +      +  T +++LP+C+   +L  G  +H   LK G   +   V +L  
Sbjct: 353 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 412

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  A SL  +I    ++  WN +I     +GH ++A+  FK M   +   PD 
Sbjct: 413 MYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEKAVMLFKEML-DEGVKPDH 470

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +T V ++SAC +  L  EG+    +               + T YG    +K        
Sbjct: 471 ITFVTLLSACSHSGLVDEGQWCFEM---------------MQTDYGITPSLKH------- 508

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
                   + CM+  + +      AL+  + +  +P+     ++LSAC   G +  GK  
Sbjct: 509 --------YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIA 560

Query: 592 HGHVF-----HLGFQ---ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGK------GW 637
             H+F     H+G+     N + S+   +     +S A           HGK      GW
Sbjct: 561 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIA-----------HGKGLRKTPGW 609

Query: 638 EAIEL 642
            ++E+
Sbjct: 610 SSMEV 614



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 247/531 (46%), Gaps = 47/531 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +  + SL+  YS      ++  LF E   +D+ +WNAMI+   ++      L   
Sbjct: 113 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL--- 169

Query: 62  GEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              +  G+R  DS T++ ++SA T+     +G  +H  SIK G+  +S L          
Sbjct: 170 --TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL--ESEL---------- 215

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
              L   +  F  M+  D +SWN+I+     N  P + +  F+EM  S  Q D ++L S 
Sbjct: 216 ---LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 272

Query: 181 VAASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +  + LG++   + +    ++ G+  ED   +++ N+++ MY++ G +++A   F  + 
Sbjct: 273 ASILSQLGDIRACRSVQGFTLRKGWFLED---ITIGNAVVVMYAKLGLVDSARAVFNWLP 329

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
             DV+SWN II G+A NG   EA ++ + M+    +  +  T V+++  C+ +  LR+G 
Sbjct: 330 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 389

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            +HG  ++  L  D+ ++ SL D Y K   L  A  LF  I  +N  V WN++I+     
Sbjct: 390 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS-VPWNTLIACHGFH 448

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIG 405
                   LFKEML    +    T + +L +C+    ++ G+      Q   G + +   
Sbjct: 449 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 508

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQ 464
              ++ MY   G L  A   ++ +S   D S W  ++ AC  +G+     I +      +
Sbjct: 509 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 568

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL-HGLALK-----SLMGLDTRVQ 509
                  V L N+ ++ G  E   E +S+ HG  L+     S M +D +V+
Sbjct: 569 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 619


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 189/627 (30%), Positives = 320/627 (51%), Gaps = 45/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L   K +H   +K  + +   + + N +   YS+C DI+AA R F  M+ ++  SW  +I
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G A NG F + F+   EMQ  + + PD      ++ +C     +  G  VH   + R  
Sbjct: 144 AGLAENGLFLDGFEFFCEMQ-SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGF 202

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
                +  +L++ Y+K   +  +  +FN +  +N +VSWN+MI+G     LYL +   F 
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN-VVSWNAMITGFTSNDLYLDA---FD 258

Query: 370 TLLAILPSCNSPESLEF---------------GKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             L ++    +P++  F                K +  + L+LG  +NT+   AL+ M  
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNS 318

Query: 415 NCGDLVAAFSLLQRISHNSD---TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            CG L  A S+    SH       + WN +I    ++G  ++A++ F  M Q  +   D 
Sbjct: 319 KCGSLQEARSIFN--SHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN-DIYLDH 375

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLD-TRVQNALITMYGRCRDIKSASTVFE 530
            T  +V +A   L+    GK +H  A+KS + ++   + NA+   Y +C  ++    VF 
Sbjct: 376 YTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFN 435

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
              + +L +W  +++A+SQ     +A+E+F ++  E   PN+ +  S+L +C  L +L +
Sbjct: 436 RMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEY 495

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCK------------SNA---AWSSMISAYGY 632
           G+Q+HG +  +G   +  I SAL+DMY+ C             SNA   +W+++I+ +  
Sbjct: 496 GQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQ 555

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG   +A++LF  M   G+ P   + + +L ACSH GLV+EGLQY+  M + Y + PE E
Sbjct: 556 HGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEME 615

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ CIVD+L R G L +A EFI  +P++P   VW  +L AC  HG+ ++G+  A+ +   
Sbjct: 616 HYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSF 675

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
           + EN   Y+ LSN Y+  G +KD + +
Sbjct: 676 KAENSATYVLLSNTYIESGSYKDGLSL 702



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/521 (27%), Positives = 249/521 (47%), Gaps = 24/521 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLC--NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           LKQ + VH   +K+      SL   N   + Y+KC D++++   F  M   +T SW  ++
Sbjct: 84  LKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI 143

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
           +G   N        +F EM   G   D  + S  +     L  +  G ++HA  +  G+ 
Sbjct: 144 AGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFT 203

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              +VS   +L++MY++  +IE + + F  MT  +VVSWNA+I GF  N  + +AFDL  
Sbjct: 204 SHTFVS--TALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFL 261

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            M +   V PD  T + +         + + + V GYA+   +  + L+  +L+D  SK 
Sbjct: 262 RM-MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKC 320

Query: 327 NSLSKAELLFNA-IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
            SL +A  +FN+          WN+MISG            LF +M          T  +
Sbjct: 321 GSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCS 380

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHN 432
           +  +  + + L  GK +H   +K G   N + + NA+ + Y  CG L     +  R+  +
Sbjct: 381 VFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM-ED 439

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  ++ A +Q   + +AI+ F +M + +  +P+  T  +V+ +C NL L   G+ 
Sbjct: 440 RDLISWTSLVTAYSQCSEWDKAIEIFSNM-RAEGIAPNQFTFSSVLVSCANLCLLEYGQQ 498

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HG+  K  + +D  +++AL+ MY +C  +  A  VF    N +  +W  +I+  +Q+  
Sbjct: 499 VHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGI 558

Query: 553 EVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQ 590
              AL+LFR    L  EPN ++ + +L AC+  G++  G Q
Sbjct: 559 VDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQ 599



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 234/473 (49%), Gaps = 30/473 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF +H   ST+LL  Y+ +   E S  +F      +VV+WNAMIT    N   +     
Sbjct: 200 RGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ EG+  D+ T + +  A+  +  + + + V   +++ G+ +++ +    ++M +K
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSK 319

Query: 121 CGDLNSSECTFSG--MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           CG L  +   F+   + C     WN ++SG L + + EK L  F +M  +    D+ +  
Sbjct: 320 CGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYC 379

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S   A A L  LS GK +HA  IK G E + YVS++N++ + Y++CG +E   + F  M 
Sbjct: 380 SVFNAIAALKCLSLGKKVHARAIKSGLEVN-YVSISNAVANAYAKCGSLEDVRKVFNRME 438

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D++SW +++  ++   ++++A ++   M+    + P+  T  +++  CA+  LL  G+
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIFSNMR-AEGIAPNQFTFSSVLVSCANLCLLEYGQ 497

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VHG   +  L  D  + ++L+D Y+K   L  A+ +FN I+   D VSW ++I+G    
Sbjct: 498 QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQH 556

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF+ M+ L  + +  T L +L +C+    +E G  +  ++L       T G+
Sbjct: 557 GIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEG--LQYFKLM----KKTYGL 610

Query: 407 NALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              M  Y    DL++       A   + R+    +   W  ++ AC  +G+ +
Sbjct: 611 VPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 166/656 (25%), Positives = 291/656 (44%), Gaps = 76/656 (11%)

Query: 16  AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTT 75
           AYS  S  +++  LF +   ++  +W  +I    EN   + G  FF EM  +GI  D   
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
              I+     ++ ++ G +VH   +  G  + + +    +NMYAK  ++  S   F+ M 
Sbjct: 174 YSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233

Query: 136 CADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
             + VSWN +++G   N+ Y +   L+ R MG  G   D  +      A   L +++  K
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAK 292

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGF 252
            +    ++LG + +  V    +LI M S+CG ++ A   F    +TC+    WNA+I G+
Sbjct: 293 EVSGYALELGVDSNTLVG--TALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGY 350

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G  E+A +L  +M     +  D  T  ++ +  A    L  G+ VH  AI+  L  +
Sbjct: 351 LRSGFNEKALELFAKM-CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVN 409

Query: 313 LL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            + + N++ + Y+K  SL     +FN +    DL+SW S+++             +F  M
Sbjct: 410 YVSISNAVANAYAKCGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDKAIEIFSNM 468

Query: 360 L---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  +QF+FS+   +L SC +   LE+G+ +H    K+G   +    +AL+ MY  C
Sbjct: 469 RAEGIAPNQFTFSS---VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKC 525

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  +  RIS N+DT  W  +I    Q+G   +A++ F+ M  Q    P++VT + 
Sbjct: 526 GCLGDAKKVFNRIS-NADTVSWTAIIAGHAQHGIVDDALQLFRRMV-QLGVEPNAVTFLC 583

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC +  L  EG     L  K+               YG   +++             
Sbjct: 584 VLFACSHGGLVEEGLQYFKLMKKT---------------YGLVPEMEH------------ 616

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
              + C++   S+      A+E    +  EPNE+   ++L AC          ++HG+V 
Sbjct: 617 ---YACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGAC----------RVHGNV- 662

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            LG       +  +L      +++A +  + + Y   G   + + L H M   G++
Sbjct: 663 ELG----ELAAQKILSF--KAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVK 712



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 262/576 (45%), Gaps = 83/576 (14%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLG--YDLLMMNSLMDFYSKSNSLSKAELL 335
           I  +V L+  C D+  L++ ++VHG+ ++      + L+++N +   YSK + +  A  L
Sbjct: 68  IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYL---------------CSQFSFSTLLAILPSCNS 380
           F+ ++  N   SW  +I+GL +  L+L                 QF++S +L I   C  
Sbjct: 128 FDQMSQRNTF-SWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI---CIG 183

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            +S+E G  +H   +  GF+++T    AL++MY    ++  ++ +   ++  +  S WN 
Sbjct: 184 LDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVS-WNA 242

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I   T N  + +A   F  M   +  +PD+ T + V  A G L    + K + G AL+ 
Sbjct: 243 MITGFTSNDLYLDAFDLFLRM-MGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALEL 301

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNL-CTWNCMISAFSQNKAEVRALE 558
            +  +T V  ALI M  +C  ++ A ++F S +  C     WN MIS + ++    +ALE
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALE 361

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALLDMY 614
           LF  +   +   +  +  S+ +A   L  L  GK++H      G + N   IS+A+ + Y
Sbjct: 362 LFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAY 421

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               +   +W+S+++AY    +  +AIE+F  M   GI P + +  
Sbjct: 422 AKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFS 481

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA--------- 710
           S+L +C++  L++ G Q +  ++ +  +  +      +VDM  + G L +A         
Sbjct: 482 SVLVSCANLCLLEYGQQVH-GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISN 540

Query: 711 -------------------------YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
                                    +  +  L ++P    +  +L ACSH G  + G Q 
Sbjct: 541 ADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQY 600

Query: 746 AELLFK---LEPENVGYYISLSNMYVALGRWKDAVE 778
            +L+ K   L PE + +Y  + ++   +G   DA+E
Sbjct: 601 FKLMKKTYGLVPE-MEHYACIVDLLSRVGHLNDAME 635



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 24/310 (7%)

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN--TIGVNALMHMYINCGDLVA 421
           S      L+ +L  C     L+  K++H + LK  FSN+   + +N + H Y  C D+ A
Sbjct: 64  SHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDA 123

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  L  ++S   +T  W ++I    +NG F +  + F  M Q Q   PD      ++  C
Sbjct: 124 ACRLFDQMSQR-NTFSWTVLIAGLAENGLFLDGFEFFCEM-QSQGIFPDQFAYSGILQIC 181

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
             L+    G  +H   +       T V  AL+ MY + ++I+ +  VF +    N+ +WN
Sbjct: 182 IGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWN 241

Query: 542 CMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MI+ F+ N   + A +LF  +  E   P+  + + +  A   L  +   K++ G+   L
Sbjct: 242 AMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALEL 301

Query: 599 GFQENSFISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKGWEAIE 641
           G   N+ + +AL+DM S C S                 NA W++MIS Y   G   +A+E
Sbjct: 302 GVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALE 361

Query: 642 LFHEMCNSGI 651
           LF +MC + I
Sbjct: 362 LFAKMCQNDI 371


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 199/626 (31%), Positives = 314/626 (50%), Gaps = 46/626 (7%)

Query: 190 LSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           LS G+  HA  L   +GY       +   L+ MY  CG    A+  F+ +       WN 
Sbjct: 62  LSQGRQAHAQMLVNGIGYNGI----LGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNW 117

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I GF + G+F+ A  L +   L     PD  T   +I  C     +  GR VH     +
Sbjct: 118 MIRGFTMMGQFDFAL-LFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKI--Q 174

Query: 308 LLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------S 353
            +G+  D+ + +SL+ FYS++  +  A  LF+ + P  D V WN M+            +
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM-PSKDGVLWNVMLNGYVKNGDWDNAT 233

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN--ALMH 411
           G+F EM    +  +  T   +L  C S   + FG  +H   +  G   ++   N  AL+ 
Sbjct: 234 GVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALID 293

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  C D+  A  +  + +      C   +I     NG    A++ F+ + Q++    +S
Sbjct: 294 IYFKCRDVEMARKIFDQRTPVDIVVC-TAMISGYVLNGMNNNALEIFRWLLQER-MRANS 351

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VTL +V+ AC  L     GK LHG  LK+  G    V +A++ MY +C  +  A   F  
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSI---LSACTQLGVLRHG 588
             + +   WN MI++ SQN     A++LFR +     +   VSI   LSAC  L  L +G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K+IH  +    F+ + F  SAL+DMYS C               K+  +W+S+I+AYG H
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G+  +++ LFH M   GI+P   + ++++SAC H+G VDEG+ Y+  M EE  +    EH
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 591

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+ GR+G+L EA+  I ++P  P  GVWG +L AC  HG+ ++ +  +  LF L+
Sbjct: 592 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLD 651

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P+N GYY+ LSN++   G+W+  ++I
Sbjct: 652 PQNSGYYVLLSNVHANAGQWESVLKI 677



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 178/674 (26%), Positives = 308/674 (45%), Gaps = 50/674 (7%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           +  L+ I+   T  + L QGR  H   +  G+  +  L    + MY  CG    ++  F 
Sbjct: 46  APQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFY 105

Query: 133 GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +    +  WN ++ G  +   +    L YF+ +G  G   D  +    + A   L  ++
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLG-CGTLPDKYTFPYVIKACGGLNSVA 164

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+V+H     +G+E   +V   +SLI  YS+ G I  A   F  M  KD V WN +++G
Sbjct: 165 LGRVVHDKIQFMGFELDVFVG--SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG ++ A  +  EM+   +  P+  T   ++S+CA  +++  G  +HG  +   L  
Sbjct: 223 YVKNGDWDNATGVFMEMRRTET-NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEM 281

Query: 312 DLLMMNS--LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           D  + N+  L+D Y K   +  A  +F+   P+ D+V   +MISG            +F+
Sbjct: 282 DSPVANTFALIDIYFKCRDVEMARKIFDQRTPV-DIVVCTAMISGYVLNGMNNNALEIFR 340

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            +L    + +  TL ++LP+C    +L  GK +H   LK G   +    +A+M MY  CG
Sbjct: 341 WLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCG 400

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A      IS + D  CWN +I +C+QNG  +EAI  F+ M        D V++   
Sbjct: 401 RLDLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPEEAIDLFRQMG-MAGTKYDCVSISAA 458

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC NL     GK +H   ++     D   ++ALI MY +C ++  A  VF++    N 
Sbjct: 459 LSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE 518

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN +I+A+  +     +L LF  +     +P+ ++ ++I+SAC   G +  G     H
Sbjct: 519 VSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGI----H 574

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
            F    +E   +  A ++ Y         + M+  +G  G+  EA  + + M  S   P 
Sbjct: 575 YFRCMTEELGIM--ARMEHY---------ACMVDLFGRAGRLNEAFGMINSMPFS---PD 620

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAYE- 712
                +LL AC   G V+       N+   +D+ P+   ++V + ++   +G+ +   + 
Sbjct: 621 AGVWGTLLGACRLHGNVELAEVASRNL---FDLDPQNSGYYVLLSNVHANAGQWESVLKI 677

Query: 713 --FIKNLPIQPKPG 724
              +K   +Q  PG
Sbjct: 678 RSLMKERGVQKVPG 691



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 272/591 (46%), Gaps = 37/591 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYET---CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           T LL  Y     F  +  +FY+    C++    WN MI            L F+ +M+  
Sbjct: 85  TKLLGMYVLCGAFLDAKNIFYQLRLWCSE---PWNWMIRGFTMMGQFDFALLFYFKMLGC 141

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  T   ++ A   +N +  GRVVH      G   D  + +  +  Y++ G ++ +
Sbjct: 142 GTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDA 201

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D V WN +++G + N   +     F EM  +    ++V+ +  ++  A  
Sbjct: 202 RYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASE 261

Query: 188 GELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
             +++G  +H L +  G E DSP V+ T +LI +Y +C D+E A + F   T  D+V   
Sbjct: 262 IMINFGSQLHGLVVSSGLEMDSP-VANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCT 320

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G+ LNG    A ++   + L   +  +  T+ +++  CA    L  G+ +HG+ ++
Sbjct: 321 AMISGYVLNGMNNNALEIFRWL-LQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 379

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
              G    + +++MD Y+K   L  A   F  I+   D V WNSMI+             
Sbjct: 380 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD-KDAVCWNSMITSCSQNGKPEEAID 438

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF++M    +++   ++ A L +C +  +L +GK IH + ++  F ++    +AL+ MY 
Sbjct: 439 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 498

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG+L  A  +   +   ++ S WN +I A   +G  ++++  F  M       PD VT 
Sbjct: 499 KCGNLDLACRVFDTMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGML-GDGIQPDHVTF 556

Query: 475 VNVISACGNLELAFEGKSLHGLA-LKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
           + +ISACG+     EG  +H    +   +G+  R+++   ++ ++GR   +  A  +  S
Sbjct: 557 LAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINS 614

Query: 532 C-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEISIVSILS 577
             ++ +   W  ++ A   +     AEV +  LF   + +P       +LS
Sbjct: 615 MPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF---DLDPQNSGYYVLLS 662



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 235/509 (46%), Gaps = 22/509 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +   +SL+  YS       +  LF    +KD V WN M+   V+N         F
Sbjct: 177 GFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVF 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF--VNMYA 119
            EM       +S T   ++S       +  G  +H L + +G+  DS + N F  +++Y 
Sbjct: 237 MEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYF 296

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC D+  +   F      D V    ++SG + N      L  FR +     +A++V+L+S
Sbjct: 297 KCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLAS 356

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A L  L+ GK +H   +K G+  S YV   ++++ MY++CG ++ A + F G++ 
Sbjct: 357 VLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGISD 414

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD V WN++I   + NGK EEA DL  +M  M   + D  ++   +S CA+   L  G+ 
Sbjct: 415 KDAVCWNSMITSCSQNGKPEEAIDLFRQMG-MAGTKYDCVSISAALSACANLPALHYGKE 473

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H + +R     DL   ++L+D YSK  +L  A  +F+ +   N+ VSWNS+I+      
Sbjct: 474 IHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNE-VSWNSIIAAYGNHG 532

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGV 406
                  LF  ML    Q    T LAI+ +C     ++ G     C   +LG        
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 592

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQ 464
             ++ ++   G L  AF ++  +  + D   W  ++ AC  +G+ + A    +++     
Sbjct: 593 ACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDP 652

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL 493
           QN S   V L NV +  G  E   + +SL
Sbjct: 653 QN-SGYYVLLSNVHANAGQWESVLKIRSL 680


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 231/819 (28%), Positives = 400/819 (48%), Gaps = 63/819 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  +       S+  LF E   K++V+W+ +++   +N         F  ++  G+  
Sbjct: 79  TLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLP 138

Query: 72  DSTTLLIIVSALTQM--NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC-GDLNSSE 128
           +   +   + A  ++  N LK G  +H L  K+   +D  L NV ++MY+ C   ++ + 
Sbjct: 139 NHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDAR 198

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ----ADNVSLSSAVAAS 184
             F  +    + SWN+I+S              F  M     +     +  +  S V  +
Sbjct: 199 RVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVA 258

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             L +     +   L      E S +V    V ++L+S +++ G I++A+  F  M  ++
Sbjct: 259 CSLVDCGLTLLEQMLA---RIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRN 315

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR--- 298
            V+ N ++ G A   + EEA  +  EM+ +  VE + ++   L+S   +   L+EG+   
Sbjct: 316 AVTMNGLMVGLARQHQGEEAAKIFKEMKDL--VEINASSYAVLLSAFTEFSNLKEGKRKG 373

Query: 299 -SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
             VH Y IR  L+   +L+ N+L++ Y+K N++  A  +F  + P  D VSWNS+ISGL 
Sbjct: 374 QEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ-LMPSKDTVSWNSIISGLD 432

Query: 356 ----FKEML----------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
               F+E +           + S+FS   +++ L SC S   +  G+ IH   +K G   
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFS---VISTLSSCASLGWIMLGQQIHGEGIKCGLDL 489

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-CTQNGHFQEAIKTFKS 460
           +    NAL+ +Y    D +  +  +  +    D   WN  I A  T      +AIK F  
Sbjct: 490 DVSVSNALLTLYAET-DCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLE 548

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M Q     P+ VT +N++SA  +L L   G+ +H L LK  +  D  ++N L+  YG+C 
Sbjct: 549 MMQA-GWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCE 607

Query: 521 DIKSASTVFES-CYNCNLCTWNCMISAFSQNKAEVRALEL---FRHLEFEPNEISIVSIL 576
            ++    +F       +  +WN MIS +  N    +A+ L           ++ ++ ++L
Sbjct: 608 QMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVL 667

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           SAC  +  L  G ++H        +    + SAL+DMY+ C               ++  
Sbjct: 668 SACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIY 727

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W+SMIS Y  HG G +A++LF +M   G  P   + + +LSACSH GLVDEG +++ +M
Sbjct: 728 SWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSM 787

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC--SHHGDT 739
            E Y++ P  EH  C+VD+LGR+G +++  EFIK +P+ P   +W  +L AC  ++  +T
Sbjct: 788 GEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNT 847

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++G++ A++L +LEP N   Y+ LSNM+ A G+W+D  E
Sbjct: 848 ELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEE 886



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 183/694 (26%), Positives = 330/694 (47%), Gaps = 65/694 (9%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H    K G+ +D   CN  VN++ + G+L S++  F  M   + VSW+ ++SG   N  
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGM 120

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVS 212
           P++  + FR +  +G   ++ ++ SA+ A   LG   L  G  IH L  K     SPY S
Sbjct: 121 PDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK-----SPYAS 175

Query: 213 ---VTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
              ++N L+SMYS C   I+ A R F  +  K   SWN+II  +   G    AF L   M
Sbjct: 176 DMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSM 235

Query: 269 QLMRS---VEPDIATVVTLISL------CADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           Q   +     P+  T  +L+++      C  +LL +    +   +  +    DL + ++L
Sbjct: 236 QREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVK----DLYVGSAL 291

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM--LYLCSQ 365
           +  +++   +  A+++F  +   N  V+ N ++ GL            FKEM  L   + 
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRN-AVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINA 350

Query: 366 FSFSTLL-AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAF 423
            S++ LL A     N  E    G+ +H + ++    +  I + NAL+++Y  C  +  A 
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNAR 410

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           S+ Q +  + DT  WN +I     N  F+EA+  F +M ++    P   ++++ +S+C +
Sbjct: 411 SIFQLMP-SKDTVSWNSIISGLDHNERFEEAVACFHTM-RRNGMVPSKFSVISTLSSCAS 468

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     G+ +HG  +K  + LD  V NAL+T+Y     ++    VF      +  +WN  
Sbjct: 469 LGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSF 528

Query: 544 ISAFSQNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           I A + ++A V +A++ F  +    ++PN ++ ++ILSA + L +L  G+QIH  +    
Sbjct: 529 IGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHS 588

Query: 600 FQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELF 643
             +++ I + LL  Y  C                +   +W++MIS Y ++G   +A+ L 
Sbjct: 589 VADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLV 648

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             M   G R    ++ ++LSAC+    ++ G++ +   +    +  E      +VDM  +
Sbjct: 649 WLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC-LEAEVVVGSALVDMYAK 707

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            GK+  A  F + +P++     W +M+S  + HG
Sbjct: 708 CGKIDYASRFFELMPVRNIYS-WNSMISGYARHG 740



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 157/298 (52%), Gaps = 5/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRC-VVMGLHF 60
           G    +  S +LLT Y+     E    +F+     D V+WN+ I A   +   V+  + +
Sbjct: 486 GLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKY 545

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM++ G + +  T + I+SA++ ++ L+ GR +H L +K  +  D+++ N  +  Y K
Sbjct: 546 FLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGK 605

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           C  +   E  FS M    D VSWN ++SG +HN    K +     M   G++ D+ +L++
Sbjct: 606 CEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLAT 665

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A A +  L  G  +HA  I+   E    V V ++L+ MY++CG I+ A R F  M  
Sbjct: 666 VLSACASVATLERGMEVHACAIRACLEAE--VVVGSALVDMYAKCGKIDYASRFFELMPV 723

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +++ SWN++I G+A +G   +A  L  +M+    + PD  T V ++S C+   L+ EG
Sbjct: 724 RNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQL-PDHVTFVGVLSACSHVGLVDEG 780



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 198/432 (45%), Gaps = 46/432 (10%)

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           DS  + +   +H    +  L  D+   N+L++ + ++ +L  A+ LF+ + P  +LVSW+
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEM-PQKNLVSWS 109

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS--PESLEFGKSIHCWQL 395
            ++SG            LF+ ++      +   + + L +C    P  L+ G  IH    
Sbjct: 110 CLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLIS 169

Query: 396 KLGFSNNTIGVNALMHMYINC-GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           K  ++++ +  N LM MY +C   +  A  + + I   +  S WN +I    + G    A
Sbjct: 170 KSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSAS-WNSIISVYCRRGDAISA 228

Query: 455 IKTFKSMTQQQ---NASPDSVTLVNVIS-ACGNLELAFE-GKSLHGLALKSLMGLDTRVQ 509
            K F SM ++    N  P+  T  ++++ AC  ++      + +     KS    D  V 
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVG 288

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--FEP 567
           +AL++ + R   I SA  +FE   + N  T N ++   ++      A ++F+ ++   E 
Sbjct: 289 SALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEI 348

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS------FISSALLDMYSNC---- 617
           N  S   +LSA T+   L+ GK+  G   H     N+       I +AL+++Y+ C    
Sbjct: 349 NASSYAVLLSAFTEFSNLKEGKR-KGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      K   +W+S+IS   ++ +  EA+  FH M  +G+ P+K SVIS LS+C+
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467

Query: 667 HSGLVDEGLQYY 678
             G +  G Q +
Sbjct: 468 SLGWIMLGQQIH 479



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 40/309 (12%)

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +   LH    K+ +  D    N L+ ++ R  ++ SA  +F+     NL +W+C++S ++
Sbjct: 57  DAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYA 116

Query: 549 QNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG--VLRHGKQIHGHVFHLGFQEN 603
           QN     A  LFR +      PN  +I S L AC +LG  +L+ G +IHG +    +  +
Sbjct: 117 QNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASD 176

Query: 604 SFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
             +S+ L+ MYS+C                K++A+W+S+IS Y   G    A +LF  M 
Sbjct: 177 MVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQ 236

Query: 648 NSGI----RPTKSSVISLLS-ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV------- 695
                   RP + +  SL++ ACS   LVD GL     +LE+   R E    V       
Sbjct: 237 REATELNCRPNEYTFCSLVTVACS---LVDCGL----TLLEQMLARIEKSSFVKDLYVGS 289

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            +V    R G +  A    + +  +    + G M+     H   +  K   E+   +E  
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEIN 349

Query: 756 NVGYYISLS 764
              Y + LS
Sbjct: 350 ASSYAVLLS 358


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 302/602 (50%), Gaps = 42/602 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N LI+MY +C   ++A + F  M  ++ VSW ++I     NG+  +A  L   M L    
Sbjct: 90  NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSM-LRSGT 148

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             D   + + +  C +   +  GR VH +A++   G DL++ N+L+  YSK+  +    +
Sbjct: 149 AADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFM 208

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS----QFSFSTLLAILPSC 378
           LF  I    DL+SW S+I+G            +F+EM+   S    +F F +      +C
Sbjct: 209 LFERIKD-KDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFR---AC 264

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +  S E+G+ IH   +K     +     +L  MY  C +L +A     RI    D   W
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSW 323

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N ++ A +  G   EA+  F  M +     PD +T+  ++ AC   +  + G+ +H   +
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEM-RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV 382

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K  +  D  V N+L++MY RC D+ SA  VF    + ++ TWN +++A +Q+      L+
Sbjct: 383 KLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLK 442

Query: 559 LFRHL-EFEP--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  L + EP  + IS+ ++LSA  +LG     KQ+H + F  G  ++  +S+ L+D Y+
Sbjct: 443 LFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYA 502

Query: 616 NC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            C                +   +WSS+I  Y   G   EA +LF  M + GIRP   + I
Sbjct: 503 KCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFI 562

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +L+ACS  G V+EG  YY+ M  EY + P  EH  CIVD+L R+GKL EA  FI  +P 
Sbjct: 563 GVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPF 622

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   +W  +L+A   H D +MGK+ AE +  ++P +   Y+ L N+Y A G W +   +
Sbjct: 623 EPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARL 682

Query: 780 GK 781
            K
Sbjct: 683 KK 684



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 263/534 (49%), Gaps = 30/534 (5%)

Query: 79  IVSALTQMNCLKQGRVVH-------CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +VSA +++  L QGR VH         S  A +  ++ L N  + MY +C   +S+   F
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW ++++  + N      L  F  M  SG  AD  +L SAV A   LG++ 
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  +K   E    + V N+L++MYS+ G ++     F  +  KD++SW +II G
Sbjct: 170 TGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA  G   EA  +  EM +  S  P+     +    C        G  +HG +I+  L  
Sbjct: 228 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
           DL +  SL D Y++  +L  A + F  I AP  DLVSWNS+++     GL  E L L S+
Sbjct: 288 DLYVGCSLSDMYARCKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
              S       T+  +L +C   ++L  G+ IH + +KLG   +    N+L+ MY  C D
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L +A  +   I  + D   WN ++ AC Q+ H +E +K F S+  +   S D ++L NV+
Sbjct: 406 LSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVL 463

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNL 537
           SA   L      K +H  A K+ +  D  + N LI  Y +C  +  A  +FE    N ++
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
            +W+ +I  ++Q      A +LF   R L   PN ++ + +L+AC+++G +  G
Sbjct: 524 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG 577



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 259/549 (47%), Gaps = 20/549 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T Y   +  +S+  +F E   ++ V+W ++I A V+N      L  F  M+  G   D
Sbjct: 92  LITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAAD 151

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L   V A T++  +  GR VH  ++K+   +D  + N  V MY+K G ++     F 
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELS 191
            +   D +SW +I++G     +  + L  FREM   G    N     SA  A   +G   
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWE 271

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG+ IH L IK   +   YV    SL  MY++C ++++A  AF+ +   D+VSWN+I++ 
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGC--SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNA 329

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +++ G   EA  L  EM+    + PD  TV  L+  C     L  GR +H Y ++  L  
Sbjct: 330 YSVEGLLSEALVLFSEMR-DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDG 388

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
           D+ + NSL+  Y++ + LS A  +F+ I    D+V+WNS+++   +     E+L L S  
Sbjct: 389 DVSVCNSLLSMYARCSDLSSAMDVFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLL 447

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           + S       +L  +L +       E  K +H +  K G  ++ +  N L+  Y  CG L
Sbjct: 448 NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSL 507

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L + + +N D   W+ +IV   Q G+ +EA   F  M +     P+ VT + V++
Sbjct: 508 DDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM-RSLGIRPNHVTFIGVLT 566

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSASTVFESC-YNCNL 537
           AC  +    EG   + +       + TR   + ++ +  R   +  A+   +   +  ++
Sbjct: 567 ACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDI 626

Query: 538 CTWNCMISA 546
             W  +++A
Sbjct: 627 IMWKTLLAA 635



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL   Y+     +S+   FY     D+V+WN+++ A      +   L  F EM + G+R 
Sbjct: 294 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 353

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+  ++ A    + L  GR++H   +K G+  D S+CN  ++MYA+C DL+S+   F
Sbjct: 354 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 413

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V+WN+I++ C  +N+PE+ L  F  +  S    D +SL++ ++ASA LG   
Sbjct: 414 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 473

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
             K +HA   K G  D   +S  N+LI  Y++CG ++ A R F  M   +DV SW+++I 
Sbjct: 474 MVKQVHAYAFKAGLVDDRMLS--NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIV 531

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A  G  +EAFDL   M+ +  + P+  T + +++ C+    + EG   + Y+I     
Sbjct: 532 GYAQFGYAKEAFDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEG--CYYYSIME-PE 587

Query: 311 YDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           Y ++        ++D  +++  L++A    + +    D++ W ++++
Sbjct: 588 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 634



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 224/503 (44%), Gaps = 40/503 (7%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +L+T YS     +    LF    +KD+++W ++I    +    +  L  F EM+ 
Sbjct: 187 LIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIV 246

Query: 67  EG------IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           EG        F S        A   +   + G  +H LSIK  +  D  +     +MYA+
Sbjct: 247 EGSHHPNEFHFGSA-----FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 301

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C +L+S+   F  +   D VSWN+I++         + L+ F EM  SG + D +++   
Sbjct: 302 CKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 361

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      L +G++IH+  +KLG +    VSV NSL+SMY++C D+ +A   F  +  +
Sbjct: 362 LCACVGRDALYHGRLIHSYLVKLGLDGD--VSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGR 298
           DVV+WN+I+   A +   EE   L     L+   EP  D  ++  ++S  A+       +
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLF---SLLNKSEPSLDRISLNNVLSASAELGYFEMVK 476

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH YA +  L  D ++ N+L+D Y+K  SL  A  LF  +    D+ SW+S+I G    
Sbjct: 477 QVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQF 536

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-----QLKLGFSN 401
                   LF  M  L  + +  T + +L +C+    +  G    C+     + + G   
Sbjct: 537 GYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVP 592

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                + ++ +    G L  A + + ++    D   W  ++ A   +   +   +  + +
Sbjct: 593 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 652

Query: 462 TQ-QQNASPDSVTLVNVISACGN 483
                + S   V L N+ +A GN
Sbjct: 653 LNIDPSHSAAYVLLCNIYAASGN 675


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 208/676 (30%), Positives = 333/676 (49%), Gaps = 40/676 (5%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           + V W + ++        ++ L  F +M  +G + + ++ S+ ++A A     S    +H
Sbjct: 5   NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            L +K G+ +  +VS  + LISMYS+   I+ A   F  M  +D VSWN++I G++  G 
Sbjct: 65  CLILKKGFSNQLFVS--SGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 258 FEEAFDLLHEM----QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            EEA  L   M    +  + +  D  T+ T++  C      R G+ VHGYA++     DL
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDF-TLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDL 181

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            +  S +  Y K   L  A L F+ I    D+V+WN+MI+G            LF +M  
Sbjct: 182 FVSGSTVYMYCKCGILDMAGLAFDQIEN-KDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              + + +T   +L +  +      G+  H   LKLG S +     AL+ MY    D+  
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
                  +S  +  S +N +I   +  G ++EA++ + S  Q +   PDS T V + S+C
Sbjct: 301 VERAFGEMSKRNLVS-FNALITGYSLMGKYEEALRVY-SQLQSEGMEPDSFTFVGLFSSC 358

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                  EG  +H  ++K  +  D  V N+++  Y +C    SA   FES    N   W 
Sbjct: 359 SVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWA 418

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +IS F+QN    +AL  F   R    + +E S  S++ A +    +  G+ +H HV   
Sbjct: 419 GIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKS 478

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
           G     ++ SA++DMYS C               K+  +W+SMI+ Y  +G   EA+ LF
Sbjct: 479 GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLF 538

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            EM +SGI PT  + + +L ACSH+GLV+EG  +YN M+  Y + P  EH  C+VD+LGR
Sbjct: 539 QEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGR 598

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G L+EA  F+ +     +PG+WG++LSAC  H ++ +G + A+    LEP     Y +L
Sbjct: 599 AGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTAL 658

Query: 764 SNMYVALGRWKDAVEI 779
           SN+Y +   W +   I
Sbjct: 659 SNIYASKELWSEVSRI 674



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 171/640 (26%), Positives = 294/640 (45%), Gaps = 56/640 (8%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           +VV W + IT       V   L  F +M+  GI  ++ T    +SA  Q         +H
Sbjct: 5   NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLH 64

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           CL +K G      + +  ++MY+K   +  +   F  M   D VSWN++++G       E
Sbjct: 65  CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNE 124

Query: 157 KCLLYFREMGWSGEQ----ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
           +    F  M  S E       + +L++ + A   LG    GK +H   +K+G++   +VS
Sbjct: 125 EACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVS 184

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
              S + MY +CG ++ A  AF  +  KD+V+WN +I G+A N   EEA +L ++M+L  
Sbjct: 185 --GSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL-E 241

Query: 273 SVEPDIAT---VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
             +P+  T   V+   +  +DS +   GR  H   ++     D+ +  +L+D YSK   +
Sbjct: 242 GFKPNDTTFCCVLKASTAMSDSAV---GRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQF--------SFSTLLAILP 376
              E  F  ++  N LVS+N++I+G      ++E L + SQ         SF T + +  
Sbjct: 299 EDVERAFGEMSKRN-LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSF-TFVGLFS 356

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           SC+   ++  G  +H   +K G  ++    N++++ Y  CG   +A    + I +  ++ 
Sbjct: 357 SCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESI-NRPNSV 415

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
           CW  +I    QNG  ++A+  F  M +  + + D  +  +VI A  +     +G+ LH  
Sbjct: 416 CWAGIISGFAQNGEGEKALMQFCKMRKFIDKT-DEFSSSSVIKAVSSWAAVEQGRHLHAH 474

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +KS +     V +A+I MY +C  ++ A  VF      N+ +WN MI+ ++QN     A
Sbjct: 475 VMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEA 534

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH---------------- 597
           L LF+ +      P  ++ V IL AC+  G++  G+  +  + H                
Sbjct: 535 LLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVD 594

Query: 598 ----LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYH 633
                G+ E    + A L   S  K    W S++SA G H
Sbjct: 595 LLGRAGYLEE---AEAFLLSSSFSKEPGIWGSLLSACGVH 631



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 167/600 (27%), Positives = 287/600 (47%), Gaps = 33/600 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   L  S+ L++ YS     + +  LF +   +D V+WN+MI    +          
Sbjct: 70  KGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGL 129

Query: 61  FGEMVEE----GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           F  M+       +     TL  ++ A   + C + G+ VH  ++K G  +D  +    V 
Sbjct: 130 FCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVY 189

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCG L+ +   F  +   D V+WNT+++G   N Y E+ +  F +M   G + ++ +
Sbjct: 190 MYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTT 249

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
               + AS  + + + G+  HA  +KLG   S  V V  +L+ MYS+  DIE  ERAF  
Sbjct: 250 FCCVLKASTAMSDSAVGRCFHAKVLKLGC--SMDVFVATALVDMYSKFYDIEDVERAFGE 307

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M+ +++VS+NA+I G++L GK+EEA  +  ++Q    +EPD  T V L S C+ S  + E
Sbjct: 308 MSKRNLVSFNALITGYSLMGKYEEALRVYSQLQ-SEGMEPDSFTFVGLFSSCSVSSTVAE 366

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           G  VH ++++  L  D+ + NS+++FYSK      A   F +I   N  V W  +ISG  
Sbjct: 367 GAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNS-VCWAGIISGFA 425

Query: 357 ------KEMLYLCSQFSFSTLL------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                 K ++  C    F          +++ + +S  ++E G+ +H   +K G      
Sbjct: 426 QNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIY 485

Query: 405 GVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
             +A++ MY  CG   D    FS++       +   WN +I    QNG  +EA+  F+ M
Sbjct: 486 VGSAVIDMYSKCGMVEDAQKVFSVMPE----KNVVSWNSMITGYAQNGFCKEALLLFQEM 541

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRC 519
           T      P +VT V ++ AC +  L  EG++ + L + +  G+   +++   ++ + GR 
Sbjct: 542 T-SSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNY-GIPPSMEHCTCMVDLLGRA 599

Query: 520 RDIKSAST-VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-EPNEISIVSILS 577
             ++ A   +  S ++     W  ++SA   +K         +H  F EP+  S  + LS
Sbjct: 600 GYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALS 659


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/619 (30%), Positives = 327/619 (52%), Gaps = 42/619 (6%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +H+  +K+G     +V     L  +Y++   +  A + F    CK V  WNA++  + L 
Sbjct: 23  LHSQCLKVGLALDSFV--VTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLE 80

Query: 256 GKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           GK+ E   L H+M      E  PD  TV   +  C+    L  G+ +HG+ +++ +  D+
Sbjct: 81  GKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDM 139

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + ++L++ YSK   ++ A  +F    P  D+V W S+I+G             F  M+ 
Sbjct: 140 FVGSALIELYSKCGQMNDAVKVFTEY-PKPDVVLWTSIITGYEQNGSPELALAFFSRMVV 198

Query: 362 LCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L  Q S    TL++   +C        G+S+H +  + GF       N+++++Y   G +
Sbjct: 199 L-EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 257

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A +L + + +  D   W+ ++     NG    A+  F  M  ++    + VT+++ + 
Sbjct: 258 RIAANLFREMPYK-DIISWSSMVACYADNGAETNALNLFNEMIDKR-IELNRVTVISALR 315

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +     EGK +H LA+     LD  V  AL+ MY +C   ++A  +F      ++ +
Sbjct: 316 ACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVS 375

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  + S +++     ++L +F ++      P+ I++V IL+A ++LG+++    +H  V 
Sbjct: 376 WAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVT 435

Query: 597 HLGFQENSFISSALLDMYSNCKS--NA-------------AWSSMISAYGYHGKGWEAIE 641
             GF  N FI ++L+++Y+ C S  NA              WSS+I+AYG+HG+G EA++
Sbjct: 436 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALK 495

Query: 642 LFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           L H+M N S ++P   + +S+LSACSH+GL++EG++ ++ M+ EY + P  EH+  +VD+
Sbjct: 496 LSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDL 555

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR G+L +A + I N+P+Q  P VWGA+L AC  H + K+G+  A  LF L+P + GYY
Sbjct: 556 LGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYY 615

Query: 761 ISLSNMYVALGRWKDAVEI 779
             LSN+Y     W DA ++
Sbjct: 616 TLLSNIYCVDKNWHDAAKL 634



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 250/527 (47%), Gaps = 29/527 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K G+  DS +      +YA+   L  +   F    C     WN ++        
Sbjct: 23  LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 155 PEKCLLYFREMGWSG---EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             + L  F +M       E+ DN ++S A+ + + L +L  GK+IH   +K   +   +V
Sbjct: 83  WVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFV 141

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
              ++LI +YS+CG +  A + F      DVV W +II G+  NG  E A      M ++
Sbjct: 142 G--SALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVL 199

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V PD  T+V+  S CA       GRSVHG+  RR     L + NS+++ Y K+ S+  
Sbjct: 200 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRI 259

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN 379
           A  LF  + P  D++SW+SM++             LF EM+    + +  T+++ L +C 
Sbjct: 260 AANLFREM-PYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 318

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  +LE GK IH   +  GF  +     ALM MY+ C     A  L  R+    D   W 
Sbjct: 319 SSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMP-KKDVVSWA 377

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++     + G   +++  F +M       PD++ LV +++A   L +  +   LH    K
Sbjct: 378 VLFSGYAEIGMAHKSLGVFCNML-SNGTRPDAIALVKILAASSELGIVQQALCLHAFVTK 436

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S    +  +  +LI +Y +C  I +A+ VF+   + ++ TW+ +I+A+  +     AL+L
Sbjct: 437 SGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKL 496

Query: 560 FR----HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
                 H + +PN+++ VSILSAC+  G++  G ++    FH+   E
Sbjct: 497 SHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKM----FHVMVNE 539



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 278/589 (47%), Gaps = 31/589 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI- 69
           T L   Y+  +    +  LF ET  K V  WNA++ +       V  L  F +M  + + 
Sbjct: 40  TKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVT 99

Query: 70  --RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
             R D+ T+ I + + + +  L+ G+++H   +K  + +D  + +  + +Y+KCG +N +
Sbjct: 100 EERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDA 158

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASAC 186
              F+     D V W +I++G   N  PE  L +F  M    +   D V+L SA +A A 
Sbjct: 159 VKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQ 218

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L + + G+ +H    + G++    + + NS++++Y + G I  A   F  M  KD++SW+
Sbjct: 219 LSDFNLGRSVHGFVKRRGFDTK--LCLANSILNLYGKTGSIRIAANLFREMPYKDIISWS 276

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +++  +A NG    A +L +EM + + +E +  TV++ +  CA S  L EG+ +H  A+ 
Sbjct: 277 SMVACYADNGAETNALNLFNEM-IDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVN 335

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEML 360
                D+ +  +LMD Y K  S   A  LFN + P  D+VSW  + SG        K + 
Sbjct: 336 YGFELDITVSTALMDMYLKCFSPENAIELFNRM-PKKDVVSWAVLFSGYAEIGMAHKSLG 394

Query: 361 YLCSQFSFST------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             C+  S  T      L+ IL + +    ++    +H +  K GF NN     +L+ +Y 
Sbjct: 395 VFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYA 454

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            C  +  A  + + + H +D   W+ +I A   +G  +EA+K    M+   +  P+ VT 
Sbjct: 455 KCSSIDNANKVFKGLRH-TDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTF 513

Query: 475 VNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC- 532
           V+++SAC +  L  EG K  H +  +  +  +      ++ + GR  ++  A  +  +  
Sbjct: 514 VSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMP 573

Query: 533 YNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISIVSILS 577
                  W  ++ A    QN    E+ AL LF     +PN     ++LS
Sbjct: 574 MQAGPHVWGALLGACRIHQNIKIGELAALNLFL---LDPNHAGYYTLLS 619



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 155/297 (52%), Gaps = 2/297 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L  + S+L  Y        +  LF E   KD+++W++M+    +N      L+ 
Sbjct: 235 RGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNL 294

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+++ I  +  T++  + A    + L++G+ +H L++  G   D ++    ++MY K
Sbjct: 295 FNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLK 354

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C    ++   F+ M   D VSW  + SG        K L  F  M  +G + D ++L   
Sbjct: 355 CFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKI 414

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AAS+ LG +     +HA   K G++++ ++    SLI +Y++C  I+ A + F G+   
Sbjct: 415 LAASSELGIVQQALCLHAFVTKSGFDNNEFIGA--SLIELYAKCSSIDNANKVFKGLRHT 472

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           DVV+W++II  +  +G+ EEA  L H+M     V+P+  T V+++S C+ + L+ EG
Sbjct: 473 DVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 529


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 223/730 (30%), Positives = 351/730 (48%), Gaps = 68/730 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCG---DLNSSECTFSGMHCADTVSWNT 144
           L  GR VH   +  G    S  L N+ + MY KCG    L  +   F  M   D VSW+ 
Sbjct: 14  LADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSWSC 73

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           I++      +  + +  F+ M     + + + + S +AA +   +L+ G  IHA  +   
Sbjct: 74  IIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKDLALGMAIHARILSPD 130

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
              S +V    +L++MY++CG IE A   F  M  KDVVSW A+I  FA  G   +A + 
Sbjct: 131 LRKSVFVG--TALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALET 188

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           L  M   R V+P+  T V  I+ C+    L  GR +H   I   L  D+ + N+L+  Y+
Sbjct: 189 LEGMIQAR-VQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYA 247

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLL 372
           K +S  +A  +F  +   N  VSWNSMI+            GLF  M     +    + L
Sbjct: 248 KGSSAEEALSVFQRMEDRNR-VSWNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFL 306

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFSLLQRI 429
            +L +C+S   L   K IH  QL+L   ++   +   N+L+  Y  CGDL AA  + QRI
Sbjct: 307 GVLSACSSTGCLRSCKRIHS-QLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRI 365

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA---CGNLEL 486
              +  S W  ++ A T +G+  +A++ +  M  Q +  PDSV L+NVI A    G++ L
Sbjct: 366 PGKNVVS-WTAMLTAYTFHGNGSKALELYDKMVGQ-SIQPDSVVLLNVIYAGSLVGDVGL 423

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           A   + LH     S   L  ++QNALI MY RC  ++ A  VF+     NL +WN M+ +
Sbjct: 424 A---RKLHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGS 480

Query: 547 FSQNKAEVRALELFRH------------LEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
           + Q+  +  A+ LF              L   P+ I  V +L A   LG L  G+ IH  
Sbjct: 481 YVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIHAE 540

Query: 595 VFHL------GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           +  +      G   N  + +AL+ MY+ C               +    WSS+++ Y +H
Sbjct: 541 LCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHMRARDTVTWSSLVAGYAHH 600

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G    AI L+ +M   G++P   + +S+L++CSH+GL+ +   ++ +M+E++ +    +H
Sbjct: 601 GHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDH 660

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
             C+VD+LGR+G +  A + ++N+P QP    W  +L  C  HGD + G   A     + 
Sbjct: 661 WKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDAQRGAVAARNAVGIS 720

Query: 754 PENVGYYISL 763
           P   G  + L
Sbjct: 721 PGFAGSTVLL 730



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 164/610 (26%), Positives = 279/610 (45%), Gaps = 71/610 (11%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y+     E + A+F +  +KDVV+W AMITA  +       L     M++  ++
Sbjct: 139 TALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQ 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T +  ++A +    L +GR +H   I  G+  D ++ N  V+MYAK      +   
Sbjct: 199 PNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSV 258

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSWN++++    +      +  F  M   G + D+VS    ++A +  G L
Sbjct: 259 FQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCL 318

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              K IH+          P +SV NSL++ Y++CGD+EAAER F  +  K+VVSW A++ 
Sbjct: 319 RSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLT 378

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--RSVHGYAIRRL 308
            +  +G   +A +L  +M + +S++PD  +VV L  + A SL+   G  R +H       
Sbjct: 379 AYTFHGNGSKALELYDKM-VGQSIQPD--SVVLLNVIYAGSLVGDVGLARKLHARVASSS 435

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
               + + N+L++ Y++  SL +A  +F+ I   N LVSWN+M+              LF
Sbjct: 436 FMLKIQIQNALINMYARCGSLEEARRVFDGIERKN-LVSWNAMMGSYVQHGYDEEAIALF 494

Query: 357 KEMLYLCSQFSFSTL-------LAILPSCNSP--ESLEFGKSIHCW------QLKLGFSN 401
            EM    S+   S L       +A++  C       L  G+ IH        ++  G + 
Sbjct: 495 SEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTT 554

Query: 402 NTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           N    NAL+ MY  C   GD  AAF  ++      DT  W+ ++     +GH + AI  +
Sbjct: 555 NVTLGNALVSMYARCGSMGDASAAFHHMR----ARDTVTWSSLVAGYAHHGHAEYAILLY 610

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           + M   +   PDSVT V+++++C                  S  GL  + ++  ++M   
Sbjct: 611 RDM-HLEGVQPDSVTYVSILNSC------------------SHAGLLAQARHFFVSM--- 648

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
                    V + C       W CM+    +     RA ++ R++ F+P+ ++  ++L  
Sbjct: 649 ---------VEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGC 699

Query: 579 CTQLGVLRHG 588
           C   G  + G
Sbjct: 700 CKVHGDAQRG 709



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 160/606 (26%), Positives = 274/606 (45%), Gaps = 49/606 (8%)

Query: 21  SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIV 80
           S    + A+F +   KDVV+W+ +I A  +       ++ F  M  E         ++IV
Sbjct: 51  SSLADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVE------PNEMVIV 104

Query: 81  SALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           S L   +  K    G  +H   +   +     +    +NMYAKCG +  +   F  M   
Sbjct: 105 STLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHK 164

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D VSW  +++         + L     M  +  Q + V+  +A+ A +    L  G+ IH
Sbjct: 165 DVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIH 224

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  I LG      +++ N+L+SMY++    E A   F  M  ++ VSWN++I  FA + +
Sbjct: 225 AAVIDLGLHGD--ITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQ 282

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY----AIRRLLGYDL 313
              A  L H M L   ++PD  + + ++S C+ +  LR  + +H      A+      DL
Sbjct: 283 SCSAMGLFHGMNL-EGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHS--PPDL 339

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + NSL+  Y+K   L  AE +F  I P  ++VSW +M++             L+ +M+ 
Sbjct: 340 SVENSLVTAYAKCGDLEAAERIFQRI-PGKNVVSWTAMLTAYTFHGNGSKALELYDKMVG 398

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              Q     LL ++ + +    +   + +H       F       NAL++MY  CG L  
Sbjct: 399 QSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEE 458

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF--------KSMTQQQNASPDSVT 473
           A  +   I   +  S WN ++ +  Q+G+ +EAI  F        K+M     +SPD + 
Sbjct: 459 ARRVFDGIERKNLVS-WNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIM 517

Query: 474 LVNVISACGNLELAFEGKSLH----GLALKSLMGLDTRVQ--NALITMYGRCRDIKSAST 527
            V ++ A   L    EG+ +H     +  + L G  T V   NAL++MY RC  +  AS 
Sbjct: 518 AVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASA 577

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--HLE-FEPNEISIVSILSACTQLGV 584
            F      +  TW+ +++ ++ +     A+ L+R  HLE  +P+ ++ VSIL++C+  G+
Sbjct: 578 AFHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGL 637

Query: 585 LRHGKQ 590
           L   + 
Sbjct: 638 LAQARH 643



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 178/360 (49%), Gaps = 15/360 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    SL+TAY+     E++  +F     K+VV+W AM+TA   +      L  + +MV 
Sbjct: 339 LSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVG 398

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           + I+ DS  LL ++ A + +  +   R +H     +  +    + N  +NMYA+CG L  
Sbjct: 399 QSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGSLEE 458

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA------ 180
           +   F G+   + VSWN +M   + + Y E+ +  F EM     +A    L S+      
Sbjct: 459 ARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDCIMA 518

Query: 181 ---VAASACLGELSYGKVIHALGIKLGYE----DSPYVSVTNSLISMYSQCGDIEAAERA 233
              + A A LG+L+ G+ IHA    +  E     +  V++ N+L+SMY++CG +  A  A
Sbjct: 519 VILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAA 578

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  M  +D V+W++++ G+A +G  E A  L  +M L   V+PD  T V++++ C+ + L
Sbjct: 579 FHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHL-EGVQPDSVTYVSILNSCSHAGL 637

Query: 294 LREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           L + R      +    L         ++D   ++  + +AE +   +    D+V+WN+++
Sbjct: 638 LAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLL 697



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 207/412 (50%), Gaps = 43/412 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           G    +    +L++ Y+  S  E +L++F    +++ V+WN+MI   A     C  MGL 
Sbjct: 231 GLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGL- 289

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM--IADSSLCNVFVNM 117
            F  M  EGI+ D  + L ++SA +   CL+  + +H     A +    D S+ N  V  
Sbjct: 290 -FHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPPDLSVENSLVTA 348

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVS 176
           YAKCGDL ++E  F  +   + VSW  +++    H N  +   LY + +G S  Q D+V 
Sbjct: 349 YAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQS-IQPDSVV 407

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L + + A + +G++   + +HA      +     + + N+LI+MY++CG +E A R F G
Sbjct: 408 LLNVIYAGSLVGDVGLARKLHARVASSSF--MLKIQIQNALINMYARCGSLEEARRVFDG 465

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL---------MRSVEPDIATVVTLISL 287
           +  K++VSWNA++  +  +G  EEA  L  EM+          +RS  PD   ++ +I L
Sbjct: 466 IERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRS-SPD--CIMAVILL 522

Query: 288 CADSLL--LREGRSVHGY--AIRR--LLG--YDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           CA + L  L EGR +H    A+    L G   ++ + N+L+  Y++  S+  A   F+ +
Sbjct: 523 CAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDASAAFHHM 582

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
               D V+W+S+++G            L+++M     Q    T ++IL SC+
Sbjct: 583 RA-RDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCS 633



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 26/212 (12%)

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLG-FQENSFISSALLDMYSNC--------------- 617
           S+L  C     L  G+++H H+   G F  +  + + L+ MY  C               
Sbjct: 3   SLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQ 62

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              K   +WS +I+AYG  G   EAI LF  M    + P +  ++S L+ACS +  +  G
Sbjct: 63  MPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLALG 119

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           +  +  +L   D+R        +++M  + G +++A      +P +     W AM++A +
Sbjct: 120 MAIHARILSP-DLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVS-WTAMITAFA 177

Query: 735 HHGDTKMGKQVAELLF--KLEPENVGYYISLS 764
             GD +   +  E +   +++P  V +  +++
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAIT 209


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/532 (31%), Positives = 293/532 (55%), Gaps = 37/532 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +++  C      + G+ +HG+ +++ L  D+ + N+LM  Y +   +  A L+F+ +   
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME- 157

Query: 343 NDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            D+VSW++MI  L             +EM ++  + S   +++++       ++  GK++
Sbjct: 158 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 391 HCWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           H + ++   +N  +GV    AL+ MY  CG L  A  L   ++  +  S W  +I  C +
Sbjct: 218 HAYVIR-NSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIR 275

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +   +E  K F  M Q++N  P+ +T++++I  CG       GK LH   L++   +   
Sbjct: 276 SNRLEEGTKLFIRM-QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           +  AL+ MYG+C DI++A  +F+S  N ++  W  M+SA++Q     +A  LF  +    
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAA- 622
             P +++IVS+LS C   G L  GK +H ++     + +  +++AL+DMY+ C   NAA 
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 623 -------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                        W+++I+ +  HG G EA+++F EM   G++P   + I LL ACSH+G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LV EG + +  M+  + + P+ EH+ C+VD+LGR+G L EA+E IK++PI+P   VWGA+
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++AC  H + ++G+  A  L ++EPEN GY + +SN+Y A  RW DA  + K
Sbjct: 575 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRK 626



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 225/439 (51%), Gaps = 37/439 (8%)

Query: 184 SACLGELSY---GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
            AC G++S+   GK IH   +K G +   +V   N+L+ MY +C  +E A   F  M  +
Sbjct: 102 KAC-GQVSWTQLGKEIHGFVLKKGLDRDVFVG--NALMLMYGECACVEYARLVFDKMMER 158

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW+ +I   + N +F+ A +L+ EM  M+ V P    +V++++L AD+  +R G+++
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQ-VRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 301 HGYAIR----RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           H Y IR      +G  +    +L+D Y+K   L  A  LFN +     +VSW +MI+G  
Sbjct: 218 HAYVIRNSNNEHMG--VPTTTALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIAGCI 274

Query: 357 KE---------MLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           +           + +  +  F    T+L+++  C    +L+ GK +H + L+ GFS +  
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ MY  C D+  A +L    + N D   W  ++ A  Q     +A   F  M + 
Sbjct: 335 LATALVDMYGKCSDIRNARALFDS-TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM-RT 392

Query: 465 QNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
               P  VT+V+++S C   G L+L   GK +H    K  + +D  +  AL+ MY +C D
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDL---GKWVHSYIDKERVEVDCILNTALVDMYAKCGD 449

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           I +A  +F    + ++C WN +I+ F+ +     AL++F  +E    +PN+I+ + +L A
Sbjct: 450 INAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHA 509

Query: 579 CTQLGVLRHGKQIHGHVFH 597
           C+  G++  GK++   + H
Sbjct: 510 CSHAGLVTEGKKLFEKMVH 528



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 242/506 (47%), Gaps = 23/506 (4%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++ A  Q++  + G+ +H   +K G+  D  + N  + MY +C  +  +   F  M   D
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            VSW+T++     N   +  L   REM +   +   V++ S V   A    +  GK +HA
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             I+    +   V  T +L+ MY++CG +  A + F G+T K VVSW A+I G   + + 
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           EE   L   MQ   ++ P+  T+++LI  C  +  L+ G+ +H Y +R      L +  +
Sbjct: 280 EEGTKLFIRMQ-EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+D Y K + +  A  LF++     D++ W +M+S             LF +M     + 
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQN-RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL- 425
           +  T++++L  C    +L+ GK +H +  K     + I   AL+ MY  CGD+ AA  L 
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
           ++ IS   D   WN +I     +G+ +EA+  F  M ++Q   P+ +T + ++ AC +  
Sbjct: 458 IEAISR--DICMWNAIITGFAMHGYGEEALDIFAEM-ERQGVKPNDITFIGLLHACSHAG 514

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNC 542
           L  EGK L    + +  GL  ++++   ++ + GR   +  A  + +S     N   W  
Sbjct: 515 LVTEGKKLFEKMVHTF-GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573

Query: 543 MISAFSQNK-AEVRALELFRHLEFEP 567
           +++A   +K  ++  L   + LE EP
Sbjct: 574 LVAACRLHKNPQLGELAATQLLEIEP 599



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 20/379 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +PT+T+LL  Y+   +   +  LF     K VV+W AMI  C+ +  +  G   F  M E
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE 291

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           E I  +  T+L ++        L+ G+ +H   ++ G     +L    V+MY KC D+ +
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F      D + W  ++S     N  ++    F +M  SG +   V++ S ++  A 
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSV----TNSLISMYSQCGDIEAAERAFWGMTCKDV 242
            G L  GK +H+      Y D   V V      +L+ MY++CGDI AA R F     +D+
Sbjct: 412 AGALDLGKWVHS------YIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDI 465

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS--- 299
             WNAII GFA++G  EEA D+  EM+  + V+P+  T + L+  C+ + L+ EG+    
Sbjct: 466 CMWNAIITGFAMHGYGEEALDIFAEME-RQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 524

Query: 300 --VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
             VH + +   + +       ++D   ++  L +A  +  ++    + + W ++++    
Sbjct: 525 KMVHTFGLVPQIEH----YGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRL 580

Query: 358 EMLYLCSQFSFSTLLAILP 376
                  + + + LL I P
Sbjct: 581 HKNPQLGELAATQLLEIEP 599



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 29/465 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    +    +L+  Y   +  E +  +F +   +DVV+W+ MI +   N+   M L  
Sbjct: 123 KGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALEL 182

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK------AGMIADSSLCNVF 114
             EM    +R     ++ +V+       ++ G+ +H   I+       G+   ++L    
Sbjct: 183 IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL---- 238

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MYAKCG L  +   F+G+     VSW  +++GC+ +N  E+    F  M       + 
Sbjct: 239 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNE 298

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           +++ S +      G L  GK +HA  ++ G+  S  +++  +L+ MY +C DI  A   F
Sbjct: 299 ITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS--LALATALVDMYGKCSDIRNARALF 356

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                +DV+ W A++  +A     ++AF+L  +M+    V P   T+V+L+SLCA +  L
Sbjct: 357 DSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR-TSGVRPTKVTIVSLLSLCAVAGAL 415

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMIS 353
             G+ VH Y  +  +  D ++  +L+D Y+K   ++ A  LF  AI+   D+  WN++I+
Sbjct: 416 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS--RDICMWNAIIT 473

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFS 400
           G            +F EM     + +  T + +L +C+    +  GK +    +   G  
Sbjct: 474 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 533

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                   ++ +    G L  A  +++ +    +T  W  ++ AC
Sbjct: 534 PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 224/816 (27%), Positives = 385/816 (47%), Gaps = 88/816 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYET--CNKDVVTWNAMITACVEN------RCVVMGLHF 60
            + +L+T Y+      S+  LF  T   ++D+VT+NA++ A                 H 
Sbjct: 50  VTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHI 109

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-----RVVHCLSIKAGMIADSSLCNVFV 115
           F  ++ + +   +   L   S L ++ CL  G       +   ++K G+  D  +    V
Sbjct: 110 F-RLLRQSVMLTTRHTL---SPLFKL-CLLYGSPSASEALQGYAVKIGLQWDVFVAGALV 164

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           N+YAK   +  +   F  M   D V WN +M   +     ++ L  F     SG + D V
Sbjct: 165 NIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCV 224

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA-AERAF 234
           S+ +               ++  +G K  +E                +   + A A + F
Sbjct: 225 SVRT---------------ILMGVGKKTVFE---------------RELEQVRAYATKLF 254

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                 DV  WN  +  +   G+  EA D   +M   R V  D  T + ++S+ A    L
Sbjct: 255 VCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR-VPCDSLTYIVILSVVASLNHL 313

Query: 295 REGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             G+ +HG  +R   G+D    + NS ++ Y K+ S++ A  +F  +  + DL+SWN++I
Sbjct: 314 ELGKQIHGAVVR--FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV-DLISWNTVI 370

Query: 353 SGLFKEMLYLCSQFSFSTLL------------AILPSCNS-PESLEFGKSIHCWQLKLGF 399
           SG  +  L  CS   F  LL            ++L +C+S  ES   G+ +H   LK G 
Sbjct: 371 SGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGI 430

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             ++    AL+ +Y   G +  A  LL       D + WN ++   T + +++EA++ F 
Sbjct: 431 VLDSFVSTALIDVYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF- 488

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           S+  ++    D +T  N   A G L    +GK +H + +K     D  V + ++ MY +C
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSIL 576
            ++KSA  VF    + +   W  +IS   +N  E +AL  +  +     +P+E +  +++
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+ L  L  GKQIH ++  L    + F+ ++L+DMY+ C               +S A
Sbjct: 609 KACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA 668

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            W++MI     HG   EA+  F+EM + G+ P + + I +LSACSHSGL  +  + +++M
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSM 728

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            + Y V PE EH+ C+VD L R+G +QEA + + ++P +    ++  +L+AC   GD + 
Sbjct: 729 QKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKET 788

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           G++VAE LF ++P +   Y+ LSN+Y A  +W++AV
Sbjct: 789 GERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAV 824



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 166/686 (24%), Positives = 313/686 (45%), Gaps = 70/686 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF--SGMHCADTVSWNTIM--- 146
           G+  H + + +G+  D  + N  + MYAKCG L S+   F  +     D V++N I+   
Sbjct: 32  GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91

Query: 147 --SGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
             +G LH+     +    FR +  S       +LS         G  S  + +    +K+
Sbjct: 92  AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G +   +V+   +L+++Y++   I  A   F  M  +DVV WN ++  +   G  +E   
Sbjct: 152 GLQWDVFVA--GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLG 209

Query: 264 LLHEMQLMRSVEPDIATVVT-LISLCADSLLLREGRSVHGYAIRRLL---GYDLLMMNSL 319
           L         + PD  +V T L+ +   ++  RE   V  YA +  +     D+ + N  
Sbjct: 210 LFSAFH-RSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKT 268

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML---YLCSQFSFSTLLAILP 376
           +  Y ++                     W ++    F++M+     C   ++  +L+++ 
Sbjct: 269 LSSYLQAGE------------------GWEAV--DCFRDMIKSRVPCDSLTYIVILSVVA 308

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           S N    LE GK IH   ++ G+       N+ ++MY+  G +  A  +  ++    D  
Sbjct: 309 SLN---HLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK-EVDLI 364

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF-EGKSLHG 495
            WN VI  C ++G  + +++ F  +  +    PD  T+ +V+ AC +LE ++  G+ +H 
Sbjct: 365 SWNTVISGCARSGLEECSLRLFIDLL-RSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            ALK+ + LD+ V  ALI +Y +   ++ A  +F +    +L +WN M+  F+ +     
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483

Query: 556 ALELFR--HLEFEP-NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL LF   H   E  ++I+  +   A   L  L+ GKQIH  V  + F  + F+ S +LD
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILD 543

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY  C                 + AW+++IS    +G+  +A+  +H+M  +G++P + +
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             +L+ ACS    +++G Q + N+++    +D    T     +VDM  + G +++AY   
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTS----LVDMYAKCGNIEDAYGLF 659

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTK 740
           + +  +    +W AM+   + HG+ +
Sbjct: 660 RRMNTR-SVALWNAMIVGLAQHGNAE 684



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 233/500 (46%), Gaps = 55/500 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +  + S +  Y        +  +F +    D+++WN +I+ C  +      L  F
Sbjct: 327 GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLF 386

Query: 62  GEMVEEGI---RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            +++  G+   +F  T++L   S+L +  C+  GR VH  ++KAG++ DS +    +++Y
Sbjct: 387 IDLLRSGLLPDQFTITSVLRACSSLEESYCV--GRQVHTCALKAGIVLDSFVSTALIDVY 444

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           +K G +  +E  F      D  SWN +M G  + +NY E  L  F  M   GE+AD ++ 
Sbjct: 445 SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE-ALRLFSLMHERGEKADQITF 503

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           ++A  A+ CL  L  GK IHA+ IK+ +    +  V + ++ MY +CG++++A + F  +
Sbjct: 504 ANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLF--VISGILDMYLKCGEMKSARKVFNQI 561

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              D V+W  +I G   NG+ E+A    H+M+L   V+PD  T  TL+  C+    L +G
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLA-GVQPDEYTFATLVKACSLLTALEQG 620

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + +H   ++    +D  +M SL+D Y+K  ++  A  LF  +   + +  WN+MI GL  
Sbjct: 621 KQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRS-VALWNAMIVGLAQ 679

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F EM          T + +L +C+                  G +++   
Sbjct: 680 HGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS----------------GLTSDA-- 721

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
                  Y N   +   + +   I H      ++ ++ A ++ GH QEA K   SM  + 
Sbjct: 722 -------YKNFDSMQKTYGVEPEIEH------YSCLVDALSRAGHIQEAEKVVSSMPFEA 768

Query: 466 NASPDSVTLVNVISACGNLE 485
           +A+    TL+N     G+ E
Sbjct: 769 SATMYR-TLLNACRVQGDKE 787



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 154/381 (40%), Gaps = 35/381 (9%)

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            +IL    +   L  GK  H   +  G + +    N L+ MY  CG L +A  L   I+ 
Sbjct: 17  FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFD-ITP 75

Query: 432 NSDTS--CWNIVIVACTQNGHFQEAIKTFKS-----MTQQQNASPDSVTLVNVISACGNL 484
            SD     +N ++ A    G   +  KT ++     + +Q        TL  +   C   
Sbjct: 76  QSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLY 135

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                 ++L G A+K  +  D  V  AL+ +Y + + I+ A  +F+     ++  WN M+
Sbjct: 136 GSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL-RHGKQIHGHVFHLGF 600
            A+ +  A    L LF         P+ +S+ +IL    +  V  R  +Q+  +   L  
Sbjct: 196 KAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL-- 253

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
               F+     D+         W+  +S+Y   G+GWEA++ F +M  S +     + I 
Sbjct: 254 ----FVCDDDSDV-------TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKN 716
           +LS  +    ++ G Q +  +     VR   +  V +    ++M  ++G +  A      
Sbjct: 303 ILSVVASLNHLELGKQIHGAV-----VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQ 357

Query: 717 LPIQPKPGVWGAMLSACSHHG 737
           +  +     W  ++S C+  G
Sbjct: 358 MK-EVDLISWNTVISGCARSG 377


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 197/631 (31%), Positives = 341/631 (54%), Gaps = 53/631 (8%)

Query: 193 GKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIID 250
           GK++H   ++ G E DS    V N+LIS+YS+CGD E A   F GM  K D+VSW+A++ 
Sbjct: 45  GKLVHRKLMQSGLELDS---VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS 101

Query: 251 GFALNG-KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-L 308
            FA N  +++  +  L  ++L     P+      +I  C+++     G  ++G+ ++   
Sbjct: 102 CFANNSMEWQAIWTFLDMLEL--GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY 159

Query: 309 LGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMIS------------GL 355
           L  D+ +   L+D + K S  L  A  +F+ + P  +LV+W  MI+             L
Sbjct: 160 LEADVCVGCELIDMFVKGSGDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDL 218

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F +M    Y+  +F++S+   +L +C     L  GK +H   ++LG + +     +L+ M
Sbjct: 219 FLDMELSGYVPDRFTYSS---VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 275

Query: 413 YINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-FQEAIKTFKSMTQQQNAS 468
           Y  C   G +  +  + +++  ++  S W  +I A  Q+G   +EAI+ F  M    +  
Sbjct: 276 YAKCAADGSVDDSRKVFEQMPEHNVMS-WTAIITAYVQSGECDKEAIELFCKMISG-HIR 333

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  +  +V+ ACGNL   + G+ ++  A+K  +     V N+LI+MY R   ++ A   
Sbjct: 334 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 393

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVL 585
           F+  +  NL ++N ++  +++N     A  LF  +      IS     S+LS    +G +
Sbjct: 394 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 453

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G+QIHG +   G++ N  I +AL+ MYS C               ++  +W+SMI+ +
Sbjct: 454 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 513

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG    A+E+FH+M  +G +P + + +++LSACSH G++ EG +++N+M +E+ + P 
Sbjct: 514 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 573

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGRSG L EA EFI ++P+     VW  +L AC  HG+T++G+  AE++ 
Sbjct: 574 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 633

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + EP++   YI LSN++ + G+WKD V+I K
Sbjct: 634 EQEPDDPAAYILLSNLHASAGQWKDVVKIRK 664



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 176/686 (25%), Positives = 334/686 (48%), Gaps = 68/686 (9%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M ++    D TT  I++ +  +    + G++VH   +++G+  DS + N  +++Y+KCGD
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 124 LNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAV 181
             ++   F GM +  D VSW+ ++S C  NN  E + +  F +M   G   +    ++ +
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 135

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTCK 240
            A +       G++I+   +K GY ++  V V   LI M+ +  GD+ +A + F  M  +
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEAD-VCVGCELIDMFVKGSGDLGSAYKVFDKMPER 194

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++V+W  +I  FA  G   +A DL  +M+L   V PD  T  +++S C +  LL  G+ +
Sbjct: 195 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQL 253

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSK---SNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           H   IR  L  D+ +  SL+D Y+K     S+  +  +F  + P ++++SW ++I+    
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM-PEHNVMSWTAIITAYVQ 312

Query: 355 ----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                     LF +M+      + FSFS++L    + + P +   G+ ++ + +KLG ++
Sbjct: 313 SGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT---GEQVYSYAVKLGIAS 369

Query: 402 -NTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            N +G N+L+ MY   G   D   AF +L       +   +N ++    +N   +EA   
Sbjct: 370 VNCVG-NSLISMYARSGRMEDARKAFDIL----FEKNLVSYNAIVDGYAKNLKSEEAFLL 424

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  +         + T  +++S   ++    +G+ +HG  LK     +  + NALI+MY 
Sbjct: 425 FNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 483

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVS 574
           RC +I++A  VF    + N+ +W  MI+ F+++    RALE+F  +     +PNEI+ V+
Sbjct: 484 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 543

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +LSAC+ +G++  G Q H   F+  ++E+  +                ++ M+   G  G
Sbjct: 544 VLSACSHVGMISEG-QKH---FNSMYKEHGIVPRM-----------EHYACMVDLLGRSG 588

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
              EA+E  + M      P  +  +   +LL AC   G  + G      +LE+    P  
Sbjct: 589 LLVEAMEFINSM------PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 642

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNL 717
             ++ + ++   +G+ ++  +  K++
Sbjct: 643 --YILLSNLHASAGQWKDVVKIRKSM 666



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 254/552 (46%), Gaps = 53/552 (9%)

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G+   AF  L ++   ++  PD+ T   L+  C      + G+ VH   ++  L  D ++
Sbjct: 5   GRLHHAFSTL-DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 63

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC 363
           +N+L+  YSK      A L+F  +    DLVSW++M+S              F +ML L 
Sbjct: 64  LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYIN-CGDLVA 421
              +     A++ +C++      G+ I+ + +K G+    + V   L+ M++   GDL +
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A+ +  ++   +  + W ++I    Q G  ++AI  F  M +     PD  T  +V+SAC
Sbjct: 184 AYKVFDKMPERNLVT-WTLMITRFAQLGCARDAIDLFLDM-ELSGYVPDRFTYSSVLSAC 241

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR---DIKSASTVFESCYNCNLC 538
             L L   GK LH   ++  + LD  V  +L+ MY +C     +  +  VFE     N+ 
Sbjct: 242 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 301

Query: 539 TWNCMISAFSQN-KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
           +W  +I+A+ Q+ + +  A+ELF  +      PN  S  S+L AC  L     G+Q++ +
Sbjct: 302 SWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 361

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
              LG    + + ++L+ MY+                 K+  ++++++  Y  + K  EA
Sbjct: 362 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 421

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC--I 697
             LF+E+ ++GI  +  +  SLLS  +  G + +G Q +  +L+      ++   +C  +
Sbjct: 422 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG---GYKSNQCICNAL 478

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL----- 752
           + M  R G ++ A++    +  +     W +M++  + HG      +  E+  K+     
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG---FATRALEMFHKMLETGT 534

Query: 753 EPENVGYYISLS 764
           +P  + Y   LS
Sbjct: 535 KPNEITYVAVLS 546



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 253/528 (47%), Gaps = 28/528 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +L++ YS     E++  +F    NK D+V+W+AM++    N      +  F +M+E G  
Sbjct: 66  TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAK-CGDLNSSE 128
            +      ++ A +  N    G +++   +K G + AD  +    ++M+ K  GDL S+ 
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + V+W  +++           +  F +M  SG   D  + SS ++A   LG
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSW 245
            L+ GK +H+  I+LG   +  V V  SL+ MY++C   G ++ + + F  M   +V+SW
Sbjct: 246 LLALGKQLHSRVIRLGL--ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303

Query: 246 NAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            AII  +  +G+ + EA +L  +M +   + P+  +  +++  C +      G  V+ YA
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 362

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++  +     + NSL+  Y++S  +  A   F+ +   N LVS+N+++ G          
Sbjct: 363 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN-LVSYNAIVDGYAKNLKSEEA 421

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF E+       S  T  ++L    S  ++  G+ IH   LK G+ +N    NAL+ M
Sbjct: 422 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 481

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG++ AAF +   +   +  S W  +I    ++G    A++ F  M  +    P+ +
Sbjct: 482 YSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHGFATRALEMFHKML-ETGTKPNEI 539

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGR 518
           T V V+SAC ++ +  EG+  H  ++    G+  R+++   ++ + GR
Sbjct: 540 TYVAVLSACSHVGMISEGQK-HFNSMYKEHGIVPRMEHYACMVDLLGR 586



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 226/473 (47%), Gaps = 21/473 (4%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S+  +F +   +++VTW  MIT   +  C    +  F +M   G   D  T   ++SA T
Sbjct: 183 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 242

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADTVS 141
           ++  L  G+ +H   I+ G+  D  +    V+MYAKC   G ++ S   F  M   + +S
Sbjct: 243 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 302

Query: 142 WNTIMSGCLHNNYPEK-CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           W  I++  + +   +K  +  F +M     + ++ S SS + A   L +   G+ +++  
Sbjct: 303 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 362

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +KLG   +    V NSLISMY++ G +E A +AF  +  K++VS+NAI+DG+A N K EE
Sbjct: 363 VKLGI--ASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 420

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L +E+     +     T  +L+S  A    + +G  +HG  ++     +  + N+L+
Sbjct: 421 AFLLFNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 479

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             YS+  ++  A  +FN +   N ++SW SMI+G            +F +ML   ++ + 
Sbjct: 480 SMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 538

Query: 369 STLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            T +A+L +C+    +  G K  +    + G          ++ +    G LV A   + 
Sbjct: 539 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 598

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            +   +D   W  ++ AC  +G+ +      + + +Q+   P +  L++ + A
Sbjct: 599 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 651



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 174/332 (52%), Gaps = 7/332 (2%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           + S  +F +    +V++W A+ITA V++  C    +  F +M+   IR +  +   ++ A
Sbjct: 286 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 345

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
              ++    G  V+  ++K G+ + + + N  ++MYA+ G +  +   F  +   + VS+
Sbjct: 346 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 405

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N I+ G   N   E+  L F E+  +G      + +S ++ +A +G +  G+ IH   +K
Sbjct: 406 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 465

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            GY+ +    + N+LISMYS+CG+IEAA + F  M  ++V+SW ++I GFA +G    A 
Sbjct: 466 GGYKSNQ--CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 523

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN--SLM 320
           ++ H+M L    +P+  T V ++S C+   ++ EG+  H  ++ +  G    M +   ++
Sbjct: 524 EMFHKM-LETGTKPNEITYVAVLSACSHVGMISEGQK-HFNSMYKEHGIVPRMEHYACMV 581

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           D   +S  L +A    N++  M D + W +++
Sbjct: 582 DLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/276 (19%), Positives = 127/276 (46%), Gaps = 5/276 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL++ Y+     E +   F     K++V++NA++    +N         F E+ + GI  
Sbjct: 376 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 435

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            + T   ++S    +  + +G  +H   +K G  ++  +CN  ++MY++CG++ ++   F
Sbjct: 436 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 495

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           + M   + +SW ++++G   + +  + L  F +M  +G + + ++  + ++A + +G +S
Sbjct: 496 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 555

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAAERAFWGMTCKDVVSWNAIID 250
            G+  H   +   +   P +     ++ +  + G  +EA E         D + W  ++ 
Sbjct: 556 EGQK-HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 614

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              ++G  E      H  +++   EPD      L+S
Sbjct: 615 ACRVHGNTELG---RHAAEMILEQEPDDPAAYILLS 647



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ ++     +L++ YS     E++  +F E  +++V++W +MIT   ++      L  F
Sbjct: 467 GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMF 526

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M+E G + +  T + ++SA + +  + +G +  + +  + G++         V++  +
Sbjct: 527 HKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 586

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            G L  +    + M   AD + W T++  C +H N
Sbjct: 587 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 621


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 187/596 (31%), Positives = 309/596 (51%), Gaps = 36/596 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N ++SMY +CG +  A   F  M  +++VS+ ++I G++ NG+  EA  L  +M L  
Sbjct: 101 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKM-LQA 159

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            + PD     ++I  CA +  +  G+ +H   I+      L+  N+L+  Y + N +S A
Sbjct: 160 DLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 219

Query: 333 ELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQFSFSTLL-------AILPSCN 379
             +F  I P  DL+SW+S+I+G       F+ + +L    SF           + L +C+
Sbjct: 220 SKVFYGI-PAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 278

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S    ++G  IH   +KL  + N I   +L  MY  CG L +A  +  +I    DT+ WN
Sbjct: 279 SLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQI-ERPDTASWN 337

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++I     NG+  EA+  F  M +     PD+++L +++ A        +G  +H   +K
Sbjct: 338 VIIAGLANNGYADEAVSVFSEM-RNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIK 396

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALE 558
                D  V N+L+TMY  C D+     +FE   N  +  +WN +++A  Q++  V  L 
Sbjct: 397 CGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLR 456

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +   E EP+ I++ ++L  C ++  L+ G Q+H + +  G     FI + L+DMY+
Sbjct: 457 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYA 516

Query: 616 NCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C S                 +WS++I  Y   G G EA+ LF EM +SGI P   + + 
Sbjct: 517 KCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVG 576

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +L+ACSH GLV+EGL+ Y  M  E+ + P  EH  C+VD+L R+G L EA  FI  + ++
Sbjct: 577 VLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLE 636

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           P   VW  +LSAC   G+  + ++ AE + K++P N   ++ L +M+ + G W+DA
Sbjct: 637 PDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDA 692



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 183/672 (27%), Positives = 313/672 (46%), Gaps = 50/672 (7%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T + ++ A +    L QGR +H   + +    D+ L N  ++MY KCG L  +   F  M
Sbjct: 66  TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
              + VS+ ++++G   N    + +  + +M  +    D  +  S + A AC G++  GK
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
            +HA  IKL  E S ++   N+LI+MY +   +  A + F+G+  KD++SW++II GF+ 
Sbjct: 186 QLHAQVIKL--ESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQ 243

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
            G   EA   L EM       P+     + +  C+  L    G  +HG  I+  L  + +
Sbjct: 244 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAI 303

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML-- 360
              SL D Y++   L  A  +FN I    D  SWN +I+GL            F EM   
Sbjct: 304 AGCSLCDMYARCGFLDSARRVFNQI-ERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS 362

Query: 361 -YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            ++    S  +LL    +   P +L  G  IH + +K GF  +    N+L+ MY  C DL
Sbjct: 363 GFIPDAISLRSLLC---AQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDL 419

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
              F+L +   + +D+  WN ++ AC Q+    E ++ FK M   +   PD +T+ N++ 
Sbjct: 420 YCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLR 478

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            C  +     G  +H  + K+ + L+  ++N LI MY +C  ++ A  +F+S  N ++ +
Sbjct: 479 GCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVS 538

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W+ +I  ++Q+     AL LFR ++    EPN ++ V +L+AC+ +G++  G +++  + 
Sbjct: 539 WSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIM- 597

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
               Q    IS           +    S ++      G   EA     EM    + P   
Sbjct: 598 ----QTEHGIS----------PTKEHCSCVVDLLARAGHLNEAERFIDEM---KLEPDVV 640

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEA---YE 712
              +LLSAC   G VD   +   N+L+   + P  +  HV +  M   SG  ++A     
Sbjct: 641 VWKTLLSACKTQGNVDLAQKAAENILK---IDPFNSTAHVLLCSMHASSGNWEDAALLRS 697

Query: 713 FIKNLPIQPKPG 724
            +K   ++  PG
Sbjct: 698 SMKKHDVKKIPG 709



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 146/584 (25%), Positives = 250/584 (42%), Gaps = 48/584 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L+ Y        +  +F     +++V++ ++IT   +N      +  + +M++  +  D
Sbjct: 105 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPD 164

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                 I+ A      +  G+ +H   IK    +     N  + MY +   ++ +   F 
Sbjct: 165 QFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFY 224

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS 191
           G+   D +SW++I++G     +  + L + +EM   G    +     S++ A + L    
Sbjct: 225 GIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 284

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG  IH L IKL    +       SL  MY++CG +++A R F  +   D  SWN II G
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGC--SLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAG 342

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A NG  +EA  +  EM+    + PD  ++ +L+      + L +G  +H + I+     
Sbjct: 343 LANNGYADEAVSVFSEMRNSGFI-PDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLA 401

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           DL + NSL+  Y+  + L     LF       D VSWN++++             LFK M
Sbjct: 402 DLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLM 461

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L    +    T+  +L  C    SL+ G  +HC+  K G        N L+ MY  CG L
Sbjct: 462 LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSL 521

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +  N D   W+ +IV   Q+G  +EA+  F+ M +     P+ VT V V++
Sbjct: 522 RQARRIFDSMD-NGDVVSWSTLIVGYAQSGFGEEALILFREM-KSSGIEPNHVTFVGVLT 579

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC ++ L  EG  L+ +               + T +G        S   E C     C 
Sbjct: 580 ACSHVGLVEEGLKLYAI---------------MQTEHG-------ISPTKEHCS----CV 613

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
            + +  A   N+AE         ++ EP+ +   ++LSAC   G
Sbjct: 614 VDLLARAGHLNEAE----RFIDEMKLEPDVVVWKTLLSACKTQG 653



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 233/505 (46%), Gaps = 32/505 (6%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           +HL    +L+  Y   +    +  +FY    KD+++W+++I    +       L    EM
Sbjct: 198 SHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEM 257

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIK----AGMIADSSLCNVFVNM 117
           +  G+   +    I  S+L   + L +   G  +H L IK       IA  SLC+    M
Sbjct: 258 LSFGVFHPNE--YIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCD----M 311

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+CG L+S+   F+ +   DT SWN I++G  +N Y ++ +  F EM  SG   D +SL
Sbjct: 312 YARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISL 371

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S + A      L  G  IH+  IK G+     +SV NSL++MY+ C D+      F   
Sbjct: 372 RSLLCAQTKPMALCQGMQIHSFIIKCGFLAD--LSVCNSLLTMYTFCSDLYCCFNLFEDF 429

Query: 238 TCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
             K D VSWNAI+     + +  E   L  ++ L+   EPD  T+  L+  C +   L+ 
Sbjct: 430 RNKADSVSWNAILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKL 488

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  VH Y+ +  L  +  + N L+D Y+K  SL +A  +F+++    D+VSW+++I G  
Sbjct: 489 GSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSM-DNGDVVSWSTLIVGYA 547

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNT 403
                     LF+EM     + +  T + +L +C+    +E G  ++   Q + G S   
Sbjct: 548 QSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTK 607

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              + ++ +    G L  A   +  +    D   W  ++ AC   G+   A K  +++ +
Sbjct: 608 EHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILK 667

Query: 464 -QQNASPDSVTLVNVISACGNLELA 487
                S   V L ++ ++ GN E A
Sbjct: 668 IDPFNSTAHVLLCSMHASSGNWEDA 692



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 224/512 (43%), Gaps = 52/512 (10%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N  I+    N  + EA +     Q   S +  + T ++LI  C+ S  L +GR +H + +
Sbjct: 32  NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
                YD ++ N ++  Y K  SL  A  +F+ + P  +LVS+ S+I+G           
Sbjct: 92  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM-PERNLVSYTSVITGYSQNGQEAEAI 150

Query: 355 -LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
            L+ +ML    +  QF+F +   I+ +C     +  GK +H   +KL  S++ I  NAL+
Sbjct: 151 TLYLKMLQADLVPDQFAFGS---IIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALI 207

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY+    +  A  +   I    D   W+ +I   +Q G   EA+   K M       P+
Sbjct: 208 AMYVRFNQMSDASKVFYGIP-AKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPN 266

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
                + + AC +L     G  +HGL +K  +  +     +L  MY RC  + SA  VF 
Sbjct: 267 EYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFN 326

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRH 587
                +  +WN +I+  + N     A+ +F   R+  F P+ IS+ S+L A T+   L  
Sbjct: 327 QIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQ 386

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCK----------------SNAAWSSMISAYG 631
           G QIH  +   GF  +  + ++LL MY+ C                  + +W+++++A  
Sbjct: 387 GMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACL 446

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY------NNMLEEY 685
            H +  E + LF  M  S   P   ++ +LL  C     +  G Q +        +LE++
Sbjct: 447 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQF 506

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
                      ++DM  + G L++A     ++
Sbjct: 507 IKNG-------LIDMYAKCGSLRQARRIFDSM 531



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 3/262 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
           GFLA L    SLLT Y+  S       LF +  NK D V+WNA++TAC+++   V  L  
Sbjct: 398 GFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRL 457

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+      D  T+  ++    +++ LK G  VHC S K G++ +  + N  ++MYAK
Sbjct: 458 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAK 517

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F  M   D VSW+T++ G   + + E+ L+ FREM  SG + ++V+    
Sbjct: 518 CGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGV 577

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + +G +  G  ++A+ ++  +  SP     + ++ + ++ G +  AER    M  +
Sbjct: 578 LTACSHVGLVEEGLKLYAI-MQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLE 636

Query: 241 -DVVSWNAIIDGFALNGKFEEA 261
            DVV W  ++      G  + A
Sbjct: 637 PDVVVWKTLLSACKTQGNVDLA 658



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 21/310 (6%)

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           +N  ++EA++ F    +  +      T +++I AC +     +G+ +H   L S    DT
Sbjct: 40  RNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDT 99

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--- 563
            + N +++MYG+C  ++ A  VF+     NL ++  +I+ +SQN  E  A+ L+  +   
Sbjct: 100 ILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQA 159

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS--NCKSNA 621
           +  P++ +  SI+ AC   G +  GKQ+H  V  L    +    +AL+ MY   N  S+A
Sbjct: 160 DLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 219

Query: 622 -------------AWSSMISAYGYHGKGWEAIELFHEMCNSGI-RPTKSSVISLLSACSH 667
                        +WSS+I+ +   G  +EA+    EM + G+  P +    S L ACS 
Sbjct: 220 SKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 279

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
               D G Q +  +  + ++         + DM  R G L  A      +  +P    W 
Sbjct: 280 LLRPDYGSQIH-GLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE-RPDTASWN 337

Query: 728 AMLSACSHHG 737
            +++  +++G
Sbjct: 338 VIIAGLANNG 347


>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
          Length = 711

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 198/655 (30%), Positives = 333/655 (50%), Gaps = 48/655 (7%)

Query: 164 EMGWSGEQADNVS-LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYS 222
           E+   GE + + S L++A+++ A     + G  +H L +K+G + + ++   +SLI++YS
Sbjct: 2   ELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIG--SSLITLYS 59

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           +C  +E++   F  M  K+ VSW A+I GFAL+ + E    L   M ++ S +P+  T  
Sbjct: 60  RCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASM-MLSSCKPNDITFA 118

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           TL S+C    LL  GRSVH   +R      + + N+L+  Y+K   + +A+ +F  IA  
Sbjct: 119 TLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIA-C 177

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            DLVSWN++I G            L KEM          + L +L SC     +E G+  
Sbjct: 178 KDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGR-- 235

Query: 391 HCWQ--LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           HC++  ++ G        + ++ +    G L  A+ L+Q +S   +   W  ++ +C  +
Sbjct: 236 HCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVH 295

Query: 449 GHF----QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
           G+     Q A    K    +   S D   L   +S+C + ++  +G  LHGL +K  +G 
Sbjct: 296 GNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVK--VGC 353

Query: 505 DTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           D+ V   ++LIT+Y RC  ++S+  VF++    N  +W  MIS F+ +      L LF  
Sbjct: 354 DSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFAS 413

Query: 563 LEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +     +PN+I+  ++ S CT   +L  GK +H     +GF     +S+ALL MY+ C  
Sbjct: 414 MRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGC 473

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K   +W++MI     +G     ++L  EM    I P   S + +LS+
Sbjct: 474 IDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSS 533

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C H+ LV+EG   +  M+E + ++P  +H+ C+VD+LGR+G L+EA++ I+ + I P   
Sbjct: 534 CRHARLVEEGRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAV 592

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +WG++L +C  HG+  +G Q AE   KLEP     +I L+N+Y  +G W D   +
Sbjct: 593 IWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSDVARV 647



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/650 (26%), Positives = 290/650 (44%), Gaps = 53/650 (8%)

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           M LH  GE        D + L   +S+        QG  +H L +K G  +   + +  +
Sbjct: 1   MELHRKGE-----TSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLI 55

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            +Y++C  L SS   F  M   +TVSW  ++SG   +N  E CL  F  M  S  + +++
Sbjct: 56  TLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDI 115

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           + ++  +       L+ G+ +HAL +++G+    YV V+N+L+SMY++CG IE A+  F 
Sbjct: 116 TFATLFSVCTKHALLALGRSVHALQMRMGFHS--YVHVSNALLSMYAKCGCIEEAQFIFG 173

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            + CKD+VSWNAII G +     +   DLL EM+  + + PD  + + ++S C  + L+ 
Sbjct: 174 CIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEME-RQHIVPDALSFLGVLSSCRHARLVE 232

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           EGR      I   +   L   + ++D   ++  L +A  L   ++   + V W S++   
Sbjct: 233 EGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSC 292

Query: 355 ----------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
                           L  E     +    S L A + SC   +    G  +H   +K+G
Sbjct: 293 RVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVG 352

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             +     ++L+ +Y  C  L +++ + Q +    +T  W  +I     +   +  +  F
Sbjct: 353 CDSTVFIGSSLITLYSRCSQLESSYLVFQTMP-TKNTVSWTAMISGFALHNRVEPCLHLF 411

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT--RVQNALITMY 516
            SM +  +  P+ +T   + S C N  L   GKS+H L ++  MG  +   V NAL++MY
Sbjct: 412 ASM-RLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMR--MGFHSYVHVSNALLSMY 468

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
            +C  I  A ++F      +L +WN MI   SQ       L+L + +E +   P+ +S +
Sbjct: 469 AKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFL 528

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYH 633
            +LS+C    ++  G+     +   G +         LD Y         S M+   G  
Sbjct: 529 GVLSSCRHARLVEEGRHCFKTMIEHGIKPG-------LDHY---------SCMVDLLGRA 572

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           G   EA +L   M    I P      SLL +C   G +  G+Q   + L+
Sbjct: 573 GLLEEAWDLIQTM---SIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLK 619



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 263/612 (42%), Gaps = 67/612 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+T YS  S  ESS  +F     K+ V+W AMI+    +  V   LH F  M+    +
Sbjct: 52  SSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCK 111

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   + S  T+   L  GR VH L ++ G  +   + N  ++MYAKCG +  ++  
Sbjct: 112 PNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFI 171

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  + C D VSWN I+ GC      + CL   +EM       D +S    +++      +
Sbjct: 172 FGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLV 231

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAII 249
             G+  H     + +   P +   + ++ +  + G +E A      M+   + V W +++
Sbjct: 232 EEGR--HCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLL 289

Query: 250 DGFALNGKFEEAFDLL-HEMQLMRSVEP-------DIATVVTLISLCADSLLLREGRSVH 301
               ++G          H ++L    EP       D + +   +S CAD  +  +G  +H
Sbjct: 290 GSCRVHGNISIGIQAAEHRLKL----EPGKGETSTDQSILAAAMSSCADRQMFTQGTQLH 345

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G  ++      + + +SL+  YS+ + L  + L+F  + P  + VSW +MISG       
Sbjct: 346 GLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTM-PTKNTVSWTAMISGFALHNRV 404

Query: 355 -----LFKEM-LYLC--SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                LF  M L  C  +  +F+TL ++   C +   L  GKS+H  Q+++GF +     
Sbjct: 405 EPCLHLFASMRLSSCKPNDITFATLFSV---CTNHALLALGKSVHALQMRMGFHSYVHVS 461

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ MY  CG +  A S+   I+   D   WN +I  C+Q G  +  +   K M ++Q+
Sbjct: 462 NALLSMYAKCGCIDEAQSIFGFIA-CKDLVSWNAMIFGCSQYGLAKHCLDLLKEM-ERQH 519

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD+++ + V+S+C +  L  EG+                                   
Sbjct: 520 IVPDALSFLGVLSSCRHARLVEEGR-------------------------------HCFK 548

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
           T+ E      L  ++CM+    +      A +L + +   PN +   S+L +C   G + 
Sbjct: 549 TMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNIS 608

Query: 587 HGKQIHGHVFHL 598
            G Q   H   L
Sbjct: 609 IGIQAAEHRLKL 620



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 234/506 (46%), Gaps = 35/506 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  S +LL+ Y+     E +  +F     KD+V+WNA+I  C +       L   
Sbjct: 144 GFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLL 203

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLS--IKAGMIADSSLCNVFVNMYA 119
            EM  + I  D+ + L ++S+      +++GR  HC    I+ G+       +  V++  
Sbjct: 204 KEMERQHIVPDALSFLGVLSSCRHARLVEEGR--HCFKTMIEHGIKPGLDHYSCMVDLLG 261

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNY------PEKCLLYFREMGWSGEQ 171
           + G L  +      M    + V W +++  C +H N        E  L    E G     
Sbjct: 262 RAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKL--EPGKGETS 319

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D   L++A+++ A     + G  +H L +K+G + + ++   +SLI++YS+C  +E++ 
Sbjct: 320 TDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIG--SSLITLYSRCSQLESSY 377

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  M  K+ VSW A+I GFAL+ + E    L   M+L  S +P+  T  TL S+C + 
Sbjct: 378 LVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMRL-SSCKPNDITFATLFSVCTNH 436

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
            LL  G+SVH   +R      + + N+L+  Y+K   + +A+ +F  IA   DLVSWN+M
Sbjct: 437 ALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIA-CKDLVSWNAM 495

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ--LKL 397
           I G            L KEM          + L +L SC     +E G+  HC++  ++ 
Sbjct: 496 IFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGR--HCFKTMIEH 553

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G        + ++ +    G L  A+ L+Q +S   +   W  ++ +C  +G+    I+ 
Sbjct: 554 GIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQA 613

Query: 458 FK-SMTQQQNASPDSVTLVNVISACG 482
            +  +  +   +   + L N+ +  G
Sbjct: 614 AEHRLKLEPGCAATHIQLANLYATIG 639



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 24/218 (11%)

Query: 557 LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +EL R  E   ++  + + +S+C    +   G Q+HG +  +G     FI S+L+ +YS 
Sbjct: 1   MELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSR 60

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               K+  +W++MIS +  H +    + LF  M  S  +P   +  +L
Sbjct: 61  CSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATL 120

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPI 719
            S C+   L+  G   +   +    +   +  HV   ++ M  + G ++EA +FI     
Sbjct: 121 FSVCTKHALLALGRSVHALQMR---MGFHSYVHVSNALLSMYAKCGCIEEA-QFIFGCIA 176

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
                 W A++  CS +    + K   +LL ++E +++
Sbjct: 177 CKDLVSWNAIIFGCSQY---VLAKHCLDLLKEMERQHI 211


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 205/701 (29%), Positives = 324/701 (46%), Gaps = 107/701 (15%)

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           A  V L+S + +    G+L  G+++HA  + L    +    + N LI+MYS C D+ +A 
Sbjct: 18  ATTVHLASLLQSCGRAGDLRRGRLLHAR-LVLSGAAAASTFLANHLITMYSHCADLASAL 76

Query: 232 RAFWGMTCKDVVSWNAIIDGFALN--------------------------GKFEEAFDLL 265
           R F  M  ++ VSW  ++ G + N                           KF       
Sbjct: 77  RLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPK 136

Query: 266 HEM------------------QLMRSVEPDIATVVTLISL---CADSLLLREGRSVHGY- 303
           H +                  +L R   P  AT V L SL   C  +  LR GR +H   
Sbjct: 137 HTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARL 196

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
            +         + N L+  YS    L+ A  LF A+ P  + VSW +++SGL + +++  
Sbjct: 197 VLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PRRNAVSWTTLVSGLSQNLMHAD 255

Query: 364 SQFSFSTL--LAILP----------------------SCNSPESLEFGKSIHCWQLKLGF 399
           +  +F+ +    + P                      SC +  S+             GF
Sbjct: 256 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASV-------------GF 302

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
                  + L  MY  CG L  A  +  ++    D   W  +I    +NG  + A+ +F+
Sbjct: 303 DTELFVASNLADMYSKCGLLSEACRVFDQMPQK-DAVAWTAMIDGYAKNGSLEAAVLSFR 361

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M ++     D     +V+SA G L+  +  KS+H    K+   L+  V+NALI MY + 
Sbjct: 362 DMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKS 421

Query: 520 RDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSI 575
            D++SAS V +      N+ +   MI  + +      AL ++   R    EPNE +  S+
Sbjct: 422 MDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSM 481

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           +  C    +L  G Q+H  V       +SF+ S L+DMY  C               +++
Sbjct: 482 IKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD 541

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            AW+++I+ +  HG G EAI+ F  M  SGIRP   + +SLL+ACSH+GLVDEGL+Y+ +
Sbjct: 542 IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYS 601

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           M E + + P+ EH+ CI+D  GR+G+L EAY+FI  +PI+P    W ++L AC   G  +
Sbjct: 602 MKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKE 661

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +G+  A+ L KLEP N G ++SLS +Y +LG+W+D   + K
Sbjct: 662 LGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 702



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 176/712 (24%), Positives = 296/712 (41%), Gaps = 109/712 (15%)

Query: 89  LKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           L++GR++H   + +G  A S+ L N  + MY+ C DL S+   F+ M   + VSW T++S
Sbjct: 36  LRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVS 95

Query: 148 GC-------------------------------LHNNYPEKCLL--------------YF 162
           G                                 HN    K  L              Y+
Sbjct: 96  GLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCHSGPTLMVKYW 155

Query: 163 REMGW---SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            +  W   +   A  V L+S + +    G+L  G+++HA  + L    +    + N LI+
Sbjct: 156 GQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHAR-LVLSGAAAASTFLANHLIT 214

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MYS C D+ +A R F  M  ++ VSW  ++ G + N    +A      M+    V P   
Sbjct: 215 MYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRA-GVAPTRF 273

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFN 337
            + +     A        RS    A    +G+D  L + ++L D YSK   LS+A  +F+
Sbjct: 274 ALSSAARAAAALGAPLRARSCTASAS---VGFDTELFVASNLADMYSKCGLLSEACRVFD 330

Query: 338 AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL-------------AILPSCNSPESL 384
            + P  D V+W +MI G  K      +  SF  +              ++L +    +  
Sbjct: 331 QM-PQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDG 389

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
              KSIHC   K GF       NAL+ MY    D+ +A  +L+      D   WN+V   
Sbjct: 390 WLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK-----IDPGGWNVVSGT 444

Query: 445 CTQNGHF-----QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
              +G+      +EA+  +  + ++Q   P+  T  ++I  C    L  +G  LH   +K
Sbjct: 445 SMIDGYIETDCVEEALVIYVEL-RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK 503

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           + +  D+ V + L+ MYG+C  I  +  +F          WN +I+ F+Q+     A++ 
Sbjct: 504 TDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQA 563

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  + +    PN I+ VS+L+AC+  G++  G +     +    +E   I          
Sbjct: 564 FDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLK-----YFYSMKEAHGIEP-------- 610

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
                 +S +I  YG  G+  EA +   EM    I+P      SLL AC   G  + G  
Sbjct: 611 --KEEHYSCIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEV 665

Query: 677 YYNNMLEEYDVRP-ETEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQPKPG 724
              N+++   + P  T  HV +  +   LG+   ++   + +++  I+  PG
Sbjct: 666 AAQNLMK---LEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPG 714



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 36/460 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI--- 69
           L+T YS+ +   S+L LF     ++ V+W  +++   +N      L  F  M   G+   
Sbjct: 212 LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 271

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           RF  ++     +AL      +       +     +   S+L     +MY+KCG L+ +  
Sbjct: 272 RFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNL----ADMYSKCGLLSEACR 327

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLG 188
            F  M   D V+W  ++ G   N   E  +L FR+M   G   AD     S ++AS  L 
Sbjct: 328 VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLK 387

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF------WGMTCKDV 242
           +    K IH    K G+E    V+V N+LI MY++  D+E+A R        W     +V
Sbjct: 388 DGWLSKSIHCCVTKAGFELE--VAVRNALIDMYAKSMDVESASRVLKIDPGGW-----NV 440

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VS  ++IDG+      EEA  +  E++  + VEP+  T  ++I  CA   LL +G  +H 
Sbjct: 441 VSGTSMIDGYIETDCVEEALVIYVELR-RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 499

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
             I+  L  D  + ++L+D Y K   +S +  LFN I    D ++WN++I+         
Sbjct: 500 QVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGR 558

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
                F  M+Y   + +    +++L +C+    ++ G K  +  +   G        + +
Sbjct: 559 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 618

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +  Y   G L  A+  +  +    +   W  ++ AC   G
Sbjct: 619 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 658



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +++L   YS       +  +F +   KD V W AMI    +N  +   +  F
Sbjct: 301 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 360

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        +  S L+    LK G   + +HC   KAG   + ++ N  ++MY
Sbjct: 361 RDMKREGL--VGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMY 418

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTI-----MSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           AK  D+ S+          D   WN +     + G +  +  E+ L+ + E+   G + +
Sbjct: 419 AKSMDVESASRVLK----IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 474

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             + SS +   A    L  G  +HA  IK       +V  T  L+ MY +CG I  + + 
Sbjct: 475 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST--LVDMYGKCGLISLSMQL 532

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  +  ++WNA+I+ FA +G   EA      M +   + P+    V+L++ C+ + L
Sbjct: 533 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IYSGIRPNHIAFVSLLTACSHAGL 591

Query: 294 LREGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + EG   + Y+++   G +      + ++D Y ++  L +A    + +    +   W S+
Sbjct: 592 VDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 650

Query: 352 I 352
           +
Sbjct: 651 L 651



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 184/484 (38%), Gaps = 79/484 (16%)

Query: 269 QLMRSVEPDIATVVTLISL---CADSLLLREGRSVHGY-AIRRLLGYDLLMMNSLMDFYS 324
           +L R   P  AT V L SL   C  +  LR GR +H    +         + N L+  YS
Sbjct: 8   RLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS 67

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
               L+ A  LF A+ P  + VSW +++SGL + +++  +  +F+ +     +  +P  L
Sbjct: 68  HCADLASALRLFAAM-PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR---AGVAPTRL 123

Query: 385 EFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            +    H          NT+G  + L   + + G  +      QR+        W     
Sbjct: 124 IYETKFH----------NTLGPKHTLAASHCHSGPTLMVKYWGQRL--------WR---- 161

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG-LALKSLM 502
                                  A+  +V L +++ +CG       G+ LH  L L    
Sbjct: 162 -------------------PPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVRALEL 559
              T + N LITMY  C D+ SA  +F +    N  +W  ++S  SQN      + A   
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 560 FRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
            R     P   ++ S   A   LG     +        +GF    F++S L DMYS C  
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGL 321

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI-SLLS 663
                        K   AW++MI  Y  +G    A+  F +M   G+      V  S+LS
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 381

Query: 664 ACSHSGLVDEGL-QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           A    GL D  L +  +  + +     E      ++DM  +S  ++ A   +K       
Sbjct: 382 AS--GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK-----ID 434

Query: 723 PGVW 726
           PG W
Sbjct: 435 PGGW 438



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 5/261 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFES-SLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           GF   +    +L+  Y+     ES S  L  +    +VV+  +MI   +E  CV   L  
Sbjct: 403 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 462

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + E+  +G+  +  T   ++        L+QG  +H   IK  +I DS + +  V+MY K
Sbjct: 463 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 522

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ S   F+ +     ++WN +++    + +  + +  F  M +SG + ++++  S 
Sbjct: 523 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 582

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + A +  G +  G K  +++    G E  P     + +I  Y + G ++ A +    M  
Sbjct: 583 LTACSHAGLVDEGLKYFYSMKEAHGIE--PKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 640

Query: 240 K-DVVSWNAIIDGFALNGKFE 259
           K +   W +++    + G  E
Sbjct: 641 KPNAYGWCSLLGACRMRGSKE 661



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 129/341 (37%), Gaps = 75/341 (21%)

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHG-LALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           A+  +V L +++ +CG       G+ LH  L L       T + N LITMY  C D+ SA
Sbjct: 16  AAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASA 75

Query: 526 STVFESCYNCNLCTWNCMISAFSQN--------------KAEVRALELFRHLEFE----- 566
             +F +    N  +W  ++S  SQN              +A V    L    +F      
Sbjct: 76  LRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGP 135

Query: 567 --------------------------------PNEISIVSILSACTQLGVLRHGKQIHGH 594
                                              + + S+L +C + G LR G+ +H  
Sbjct: 136 KHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHAR 195

Query: 595 VFHLGFQENS-FISSALLDMYSNC--------------KSNA-AWSSMISAYGYHGKGWE 638
           +   G    S F+++ L+ MYS+C              + NA +W++++S    +    +
Sbjct: 196 LVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHAD 255

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC-- 696
           A+  F  M  +G+ PT+ ++ S   A +  G          +      V  +TE  V   
Sbjct: 256 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAP----LRARSCTASASVGFDTELFVASN 311

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + DM  + G L EA      +P Q     W AM+   + +G
Sbjct: 312 LADMYSKCGLLSEACRVFDQMP-QKDAVAWTAMIDGYAKNG 351


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 200/722 (27%), Positives = 329/722 (45%), Gaps = 140/722 (19%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +HA  IK G++   ++     L+ MY++CG ++ A+  F  M  +++ SW AI+  +
Sbjct: 78  GKQVHAHTIKTGFDADGFIDT--KLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVY 135

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G FEEAF L   +Q    VE D      +   C+    +  GR +HG  I+     +
Sbjct: 136 LDHGLFEEAFLLFQVLQF-DGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLN 194

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQF- 366
           + + N+L+D Y K  SL  A+ +   + P  D V+WNS+I+     G+  E L    +  
Sbjct: 195 IYVSNALIDMYGKCGSLDDAKKVLVKM-PERDSVTWNSVITACAANGMVYEALEFLEKMK 253

Query: 367 ------------------------------------------SFSTLLAILPSCNSPESL 384
                                                     +  TL  +LP+C   + L
Sbjct: 254 SLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRL 313

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC------- 437
           + GK +H +  +  F +N + VNAL+ +Y  CGD+  A  +  + S  +  SC       
Sbjct: 314 DLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGY 373

Query: 438 ---------------------------WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
                                      WN +I    +N  F EA   F++M  ++   PD
Sbjct: 374 CESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPD 433

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           S TL +V++AC +     +GK +H  A+   +  DT V  AL+ MY +C+D+ +A   F+
Sbjct: 434 SFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFD 493

Query: 531 SCYNCNLCTWNCMISAFSQNK-------------------------------AEVRALEL 559
                ++ TWN +IS ++++                                 E R L+L
Sbjct: 494 EVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDL 553

Query: 560 FRHL-------EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
              L       +  P+  ++  IL AC++L  L  GKQ H H    G+  +  I +AL+D
Sbjct: 554 TMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVD 613

Query: 613 MYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+ C S                 + ++M++A   HG G E I LF  M   G  P   +
Sbjct: 614 MYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVT 673

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+LS+C H G V+ G ++++ ++  Y+V+P  +H+  +VD+L RSG+L EAYE IK +
Sbjct: 674 FLSVLSSCVHVGSVETGCEFFD-LMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKM 732

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++    +WGA+L  C  HG+ ++G+  AE L +LEP N G Y+ L+N++    RW D  
Sbjct: 733 PVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLA 792

Query: 778 EI 779
            +
Sbjct: 793 RV 794



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 170/686 (24%), Positives = 282/686 (41%), Gaps = 140/686 (20%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           S L    C K G+ VH  +IK G  AD  +    + MYA+CG L  ++  F  M   +  
Sbjct: 67  SVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLH 126

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW  I+S  L +   E+  L F+ + + G + D         A + LG +  G+ +H L 
Sbjct: 127 SWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLV 186

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD------------------- 241
           IK  +  + YVS  N+LI MY +CG ++ A++    M  +D                   
Sbjct: 187 IKFRFCLNIYVS--NALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYE 244

Query: 242 -----------------VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
                            VVSW+A+I GFA NG  EEA ++L  MQ+   + P+  T+  +
Sbjct: 245 ALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQV-EGLVPNAQTLAGV 303

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK------------------- 325
           +  CA    L  G+ +HGY  R     + +++N+L+D Y +                   
Sbjct: 304 LPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNV 363

Query: 326 ------------SNSLSKAELLFNAIAPM---NDLVSWNSMISGLFKEMLYLCSQFSFST 370
                       S  +SKA+ LF+ +  +     L+SWNS+ISG  +  ++  +   F  
Sbjct: 364 LSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQN 423

Query: 371 LL-------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +L             ++L +C    SL  GK IH   +  G  ++T    AL+ MY  C 
Sbjct: 424 MLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQ 483

Query: 418 DLVAA------------------------FSLLQRIS----------HNSDTSCWNIVIV 443
           DL AA                         + ++RI           ++ +   WN ++ 
Sbjct: 484 DLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILA 543

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
              +N      ++ F  M Q     PD  T+  ++ AC  L     GK  H  ++K    
Sbjct: 544 GLVENRQLDLTMQLFSEM-QISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYD 602

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR-- 561
            D  +  AL+ MY +C  +K A   ++   N NL + N M++A + +      + LF+  
Sbjct: 603 TDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTM 662

Query: 562 -HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
             L F P+ ++ +S+LS+C  +G +  G +                   L+  Y+   + 
Sbjct: 663 LALGFIPDHVTFLSVLSSCVHVGSVETGCEFFD----------------LMGYYNVKPTL 706

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEM 646
             ++SM+      G+  EA EL  +M
Sbjct: 707 KHYTSMVDLLSRSGQLHEAYELIKKM 732



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 159/691 (23%), Positives = 283/691 (40%), Gaps = 133/691 (19%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A     T LL  Y+     + +  LF     +++ +W A+++  +++         F
Sbjct: 89  GFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLF 148

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +  +G+  D     ++  A + +  ++ GR +H L IK     +  + N  ++MY KC
Sbjct: 149 QVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKC 208

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCL------------------------------- 150
           G L+ ++     M   D+V+WN++++ C                                
Sbjct: 209 GSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAV 268

Query: 151 -----HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
                 N Y E+ +     M   G   +  +L+  + A A L  L  GK +H    +  +
Sbjct: 269 IGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDF 328

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV----------------------- 242
             +P V   N+L+ +Y +CGD+  A + F   + K+V                       
Sbjct: 329 ISNPVV--VNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELF 386

Query: 243 ------------VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
                       +SWN+II G+  N  F+EAF +   M +   +EPD  T+ ++++ CAD
Sbjct: 387 DCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACAD 446

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
           ++ LR+G+ +H  AI + L  D  +  +L++ YSK   L+ A++ F+ +    D+ +WN+
Sbjct: 447 TISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVME-KDVPTWNA 505

Query: 351 MISG-----------------------------------------------LFKEMLYLC 363
           +ISG                                               LF EM    
Sbjct: 506 LISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISK 565

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +    T+  ILP+C+   +LE GK  H   +K G+  +     AL+ MY  CG L  A 
Sbjct: 566 LRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQ 625

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-- 481
               RIS N +    N ++ AC  +GH +E I  F++M       PD VT ++V+S+C  
Sbjct: 626 LAYDRIS-NPNLVSHNAMLTACAMHGHGEEGISLFQTML-ALGFIPDHVTFLSVLSSCVH 683

Query: 482 -GNLELAFEGKSLHG-LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLC 538
            G++E   E   L G   +K  +    +   +++ +  R   +  A  + +     C+  
Sbjct: 684 VGSVETGCEFFDLMGYYNVKPTL----KHYTSMVDLLSRSGQLHEAYELIKKMPVECDSV 739

Query: 539 TWNCMISA-FSQNKAEVRALELFRHLEFEPN 568
            W  ++    +    E+  +   R +E EPN
Sbjct: 740 LWGALLGGCVTHGNIELGEIAAERLIELEPN 770



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 59/377 (15%)

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           S   ++L SC  P+    GK +H   +K GF  +      L+ MY  CG L  A  L + 
Sbjct: 63  SKYASVLDSCKCPK---LGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFET 119

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +  S W  ++     +G F+EA   F+ + Q      D      V  AC  L    
Sbjct: 120 MPMRNLHS-WKAILSVYLDHGLFEEAFLLFQVL-QFDGVELDFFVFPLVFKACSGLGSVE 177

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRC---------------RDIKSASTVFESC- 532
            G+ LHGL +K    L+  V NALI MYG+C               RD  + ++V  +C 
Sbjct: 178 LGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACA 237

Query: 533 -----YNC---------------NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNE 569
                Y                 N+ +W+ +I  F+QN  +  A+E+   ++ E   PN 
Sbjct: 238 ANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNA 297

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            ++  +L AC +L  L  GKQ+HG++    F  N  + +AL+D+Y  C            
Sbjct: 298 QTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLK 357

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              K+  + ++MI  Y   G   +A ELF  M   GI     S  S++S    + + DE 
Sbjct: 358 FSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEA 417

Query: 675 LQYYNNMLEEYDVRPET 691
              + NML E  + P++
Sbjct: 418 FSMFQNMLMEEGIEPDS 434


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 226/808 (27%), Positives = 387/808 (47%), Gaps = 91/808 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLH---FFGEMVEE 67
           +L++ YS       +  +F +  ++D+V+WN+++ A  ++  CVV  +        ++ +
Sbjct: 79  NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRV-----VHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            + + S   L   S + ++ CL  G V      H  + K G+  D  +    VN+Y K G
Sbjct: 139 DVVYTSRMTL---SPMLKL-CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +   +  F  M   D V WN ++   L             EMG+  E  D   LSSA  
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYL-------------EMGFKEEAID---LSSAFH 238

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           +S     L+  ++   L  ++  +DS                G +++        +  ++
Sbjct: 239 SSG----LNPNEITLRLLARISGDDS--------------DAGQVKSFANGNDASSVSEI 280

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREGRSV 300
           +  N  +  +  +G++        +M +   VE D  T + +++     DSL L  G+ V
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSLAL--GQQV 337

Query: 301 HGYAIRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           H  A++  LG DL++   NSL++ Y K      A  +F+ ++   DL+SWNS+I+G    
Sbjct: 338 HCMALK--LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGIAQN 394

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIG 405
                   LF ++L    +    T+ ++L + +S PE L   K +H   +K+   +++  
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+  Y     +  A  L +R  HN D   WN ++   TQ+    + +K F  M +Q 
Sbjct: 455 STALIDAYSRNRCMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             S D  TL  V   CG L    +GK +H  A+KS   LD  V + ++ MY +C D+ +A
Sbjct: 513 ERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
              F+S    +   W  MIS   +N  E RA  +F  +      P+E +I ++  A + L
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMI 627
             L  G+QIH +   L    + F+ ++L+DMY+ C S                 AW++M+
Sbjct: 632 TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
                HG+G E ++LF +M + GI+P K + I +LSACSHSGLV E  ++  +M  +Y +
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
           +PE EH+ C+ D LGR+G +++A   I+++ ++    ++  +L+AC   GDT+ GK+VA 
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT 811

Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKD 775
            L +LEP +   Y+ LSNMY A  +W +
Sbjct: 812 KLLELEPLDSSAYVLLSNMYAAASKWDE 839



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 175/686 (25%), Positives = 303/686 (44%), Gaps = 65/686 (9%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM------SGCLHNNYPEKCLLYFR 163
           L N  ++MY+KCG L  +   F  M   D VSWN+I+      S C+  N  ++  L FR
Sbjct: 76  LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI-QQAFLLFR 134

Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ 223
            +         ++LS  +      G +   +  H    K+G +   +V+   +L+++Y +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA--GALVNIYLK 192

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
            G ++  +  F  M  +DVV WN ++  +   G  EEA DL         + P+  T+  
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-SSGLNPNEITLRL 251

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L  +  D     + +S                      F + +++ S +E++F       
Sbjct: 252 LARISGDDSDAGQVKS----------------------FANGNDASSVSEIIFRNKGLSE 289

Query: 344 DLVSWN-SMISGLFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
            L S   S +   F +M+     C Q +F  +LA   +    +SL  G+ +HC  LKLG 
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLA---TAVKVDSLALGQQVHCMALKLGL 346

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
                  N+L++MY        A ++   +S   D   WN VI    QNG   EA+  F 
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIAQNGLEVEAVCLFM 405

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGR 518
            +  +    PD  T+ +V+ A  +L       K +H  A+K     D+ V  ALI  Y R
Sbjct: 406 QLL-RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--HLEFE-PNEISIVSI 575
            R +K A  +FE  +N +L  WN M++ ++Q+    + L+LF   H + E  ++ ++ ++
Sbjct: 465 NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
              C  L  +  GKQ+H +    G+  + ++SS +LDMY  C                 +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
            AW++MIS    +G+   A  +F +M   G+ P + ++ +L  A S    +++G Q + N
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
            L + +   +      +VDM  + G + +AY   K + +      W AML   + HG+ K
Sbjct: 644 AL-KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGK 701

Query: 741 MGKQVAELLFKL--EPENVGYYISLS 764
              Q+ + +  L  +P+ V +   LS
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLS 727



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 272/595 (45%), Gaps = 61/595 (10%)

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L +A+ +S    +L  GK  HA    L +E++P   + N+LISMYS+CG +  A R F  
Sbjct: 46  LRNAITSS----DLMLGKCTHAR--ILTFEENPERFLINNLISMYSKCGSLTYARRVFDK 99

Query: 237 MTCKDVVSWNAIIDGFALNGK-----FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           M  +D+VSWN+I+  +A + +      ++AF LL  +     V     T+  ++ LC  S
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAF-LLFRILRQDVVYTSRMTLSPMLKLCLHS 158

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             +    S HGYA +  L  D  +  +L++ Y K   + + ++LF  + P  D+V WN M
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM-PYRDVVLWNLM 217

Query: 352 ISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           +        YL   F               E+++   + H      G + N I +  L  
Sbjct: 218 LKA------YLEMGF-------------KEEAIDLSSAFH----SSGLNPNEITLRLLAR 254

Query: 412 MYINCGDL--VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  +  D   V +F+     S  S+    N  +     +G +   +K F  M  + +   
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVEC 313

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D VT + +++    ++    G+ +H +ALK  + L   V N+LI MY + R    A TVF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV-L 585
           ++    +L +WN +I+  +QN  EV A+ LF  L     +P++ ++ S+L A + L   L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYS--NCKSNA------------AWSSMISAYG 631
              KQ+H H   +    +SF+S+AL+D YS   C   A            AW++M++ Y 
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYT 493

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPE 690
               G + ++LF  M   G R    ++ ++   C     +++G Q +   ++  YD+   
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
                 I+DM  + G +  A     ++P+ P    W  M+S C  +G+ +    V
Sbjct: 554 VSSG--ILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHV 605



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 1/237 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  S+ +L  Y       ++   F      D V W  MI+ C+EN       H F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D  T+  +  A + +  L+QGR +H  ++K     D  +    V+MYAKC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ + C F  +   +  +WN ++ G   +   ++ L  F++M   G + D V+    +
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +A +  G +S     H   +   Y   P +   + L     + G ++ AE     M+
Sbjct: 727 SACSHSGLVSEA-YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 192/626 (30%), Positives = 313/626 (50%), Gaps = 39/626 (6%)

Query: 185 ACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-D 241
           AC+    L  GK+IH   + LG ++  ++  T  LI+ Y  C   + A+  F  M    +
Sbjct: 12  ACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKT--LINQYLSCHLYDHAKCVFDNMENPCE 69

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +  WN ++ G+  N  + EA +L  ++     ++PD  T  ++   C        G+ +H
Sbjct: 70  ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
              I+  L  D+++ +SL+  Y K N+  KA  LFN + P  D+  WN++IS     G F
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEM-PEKDVACWNTVISCYYQSGNF 188

Query: 357 KEMLY---LCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           K+ L    L  +F F     T+   + SC     L  G  IH   +  GF  ++   +AL
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A  + +++   +  + WN +I      G     I+ FK M   +   P
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVA-WNSMISGYGLKGDIISCIQLFKRM-YNEGVKP 306

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              TL ++I  C       EGK +HG  +++ +  D  V ++L+ +Y +C  ++ A  +F
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIF 366

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
           +      + +WN MIS +        AL LF  +     E + I+  S+L+AC+QL  L 
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALE 426

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GK+IH  +       N  +  ALLDMY+ C               +   +W+SMI+AYG
Sbjct: 427 KGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYG 486

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG  + A+ELF EM  S ++P + + +++LSAC H+GLVDEG  Y+N M+  Y + P  
Sbjct: 487 SHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRV 546

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           EH+ C++D+LGR+G+L EAYE ++  P I+    +   + SAC  H +  +G ++A  L 
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLI 606

Query: 751 KLEPENVGYYISLSNMYVALGRWKDA 776
             +P++   YI LSNMY +  +W + 
Sbjct: 607 DKDPDDSSTYILLSNMYASAHKWDEV 632



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 179/674 (26%), Positives = 304/674 (45%), Gaps = 47/674 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  LL ++ A      LKQG+++H   +  G+  D  LC   +N Y  C   + ++C F
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 132 SGMHCADTVS-WNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             M     +S WN +M+G   N  Y E   L+ + + +   + D+ +  S   A   L  
Sbjct: 62  DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              GK+IH   IK G      + V +SL+ MY +C   E A   F  M  KDV  WN +I
Sbjct: 122 YVLGKMIHTCLIKTGLMMD--IVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  +G F++A +    M+     EP+  T+ T IS CA  L L  G  +H   I    
Sbjct: 180 SCYYQSGNFKDALEYFGLMRRF-GFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  + ++L+D Y K   L  A  +F  + P   +V+WNSMISG            LFK
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEIFEQM-PKKTVVAWNSMISGYGLKGDIISCIQLFK 297

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + + +TL +++  C+    L  GK +H + ++     +    ++LM +Y  CG
Sbjct: 298 RMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCG 357

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  + + I   S    WN++I      G   EA+  F  M ++     D++T  +V
Sbjct: 358 KVELAEKIFKLIP-KSKVVSWNVMISGYVAEGKLFEALGLFSEM-RKSYVESDAITFTSV 415

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++AC  L    +GK +H L ++  +  +  V  AL+ MY +C  +  A +VF+     +L
Sbjct: 416 LTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDL 475

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W  MI+A+  +     ALELF  +     +P+ ++ ++ILSAC   G++         
Sbjct: 476 VSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLV--------- 526

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                  E  +  + ++++Y        +S +I   G  G+  EA E+  +  N  IR  
Sbjct: 527 ------DEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ--NPEIRDD 578

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYEF 713
              + +L SAC     +D G +    ++   D  P ++  ++ + +M   + K  E    
Sbjct: 579 VELLSTLFSACRLHRNIDLGAEIARTLI---DKDPDDSSTYILLSNMYASAHKWDEVRVV 635

Query: 714 ---IKNLPIQPKPG 724
              +K L ++  PG
Sbjct: 636 RSKMKELGLKKNPG 649



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 252/510 (49%), Gaps = 22/510 (4%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           ++  WN ++    +N   V  L  F +++    ++ DS T   +  A   ++    G+++
Sbjct: 69  EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   IK G++ D  + +  V MY KC     +   F+ M   D   WNT++S    +   
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           +  L YF  M   G + ++V++++A+++ A L +L+ G  IH   I  G+    ++S  +
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS--S 246

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY +CG +E A   F  M  K VV+WN++I G+ L G       L   M     V+
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY-NEGVK 305

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T+ +LI +C+ S  L EG+ VHGY IR  +  D+ + +SLMD Y K   +  AE +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKI 365

Query: 336 FNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  I P + +VSWN MIS            GLF EM     +    T  ++L +C+   +
Sbjct: 366 FKLI-PKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAA 424

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE GK IH   ++    NN + + AL+ MY  CG +  AFS+ + +    D   W  +I 
Sbjct: 425 LEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMIT 483

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A   +GH   A++ F  M  Q N  PD V  + ++SACG+  L  EG   +   + ++ G
Sbjct: 484 AYGSHGHAYGALELFAEML-QSNVKPDRVAFLAILSACGHAGLVDEG-CYYFNQMINVYG 541

Query: 504 LDTRVQN--ALITMYGRCRDIKSASTVFES 531
           +  RV++   LI + GR   +  A  + + 
Sbjct: 542 IIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 197/385 (51%), Gaps = 20/385 (5%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           LL +L +C + +SL+ GK IH   + LG  N+      L++ Y++C     A  +   + 
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           +  + S WN ++   T+N  + EA++ F+ +       PDS T  +V  ACG L     G
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +H   +K+ + +D  V ++L+ MYG+C   + A  +F      ++  WN +IS + Q+
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185

Query: 551 KAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                ALE F   R   FEPN ++I + +S+C +L  L  G +IH  + + GF  +SFIS
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           SAL+DMY  C               K+  AW+SMIS YG  G     I+LF  M N G++
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVK 305

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           PT +++ SL+  CS S  + EG ++ +       ++P+   +  ++D+  + GK++ A +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEK 364

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHG 737
             K +P + K   W  M+S     G
Sbjct: 365 IFKLIP-KSKVVSWNVMISGYVAEG 388



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 190/389 (48%), Gaps = 16/389 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   +SL+  Y   + FE ++ LF E   KDV  WN +I+   ++      L +F
Sbjct: 136 GLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M   G   +S T+   +S+  ++  L +G  +H   I +G + DS + +  V+MY KC
Sbjct: 196 GLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKC 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M     V+WN+++SG         C+  F+ M   G +    +LSS +
Sbjct: 256 GHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLI 315

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    L  GK +H   I+   +  P V V +SL+ +Y +CG +E AE+ F  +    
Sbjct: 316 MVCSRSARLLEGKFVHGYTIRNRIQ--PDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSK 373

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN +I G+   GK  EA  L  EM+    VE D  T  ++++ C+    L +G+ +H
Sbjct: 374 VVSWNVMISGYVAEGKLFEALGLFSEMR-KSYVESDAITFTSVLTACSQLAALEKGKEIH 432

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I + L  + ++M +L+D Y+K  ++ +A  +F  + P  DLVSW SMI+        
Sbjct: 433 NLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCL-PKRDLVSWTSMITAYGSHGHA 491

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSC 378
                LF EML    +      LAIL +C
Sbjct: 492 YGALELFAEMLQSNVKPDRVAFLAILSAC 520



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 152/296 (51%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL     S++L+  Y    + E ++ +F +   K VV WN+MI+       ++  +  F
Sbjct: 237 GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLF 296

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++   TTL  ++   ++   L +G+ VH  +I+  +  D  + +  +++Y KC
Sbjct: 297 KRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKC 356

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  F  +  +  VSWN ++SG +      + L  F EM  S  ++D ++ +S +
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVL 416

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IH L I+   +++    V  +L+ MY++CG ++ A   F  +  +D
Sbjct: 417 TACSQLAALEKGKEIHNLIIEKKLDNNEV--VMGALLDMYAKCGAVDEAFSVFKCLPKRD 474

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +VSW ++I  +  +G    A +L  EM L  +V+PD    + ++S C  + L+ EG
Sbjct: 475 LVSWTSMITAYGSHGHAYGALELFAEM-LQSNVKPDRVAFLAILSACGHAGLVDEG 529


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 197/631 (31%), Positives = 341/631 (54%), Gaps = 53/631 (8%)

Query: 193 GKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIID 250
           GK++H   ++ G E DS    V N+LIS+YS+CGD E A   F GM  K D+VSW+A++ 
Sbjct: 63  GKLVHRKLMQSGLELDS---VVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVS 119

Query: 251 GFALNG-KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-L 308
            FA N  +++  +  L  ++L     P+      +I  C+++     G  ++G+ ++   
Sbjct: 120 CFANNSMEWQAIWTFLDMLEL--GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY 177

Query: 309 LGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMIS------------GL 355
           L  D+ +   L+D + K S  L  A  +F+ + P  +LV+W  MI+             L
Sbjct: 178 LEADVCVGCELIDMFVKGSGDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDL 236

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           F +M    Y+  +F++S+   +L +C     L  GK +H   ++LG + +     +L+ M
Sbjct: 237 FLDMELSGYVPDRFTYSS---VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDM 293

Query: 413 YINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-FQEAIKTFKSMTQQQNAS 468
           Y  C   G +  +  + +++  ++  S W  +I A  Q+G   +EAI+ F  M    +  
Sbjct: 294 YAKCAADGSVDDSRKVFEQMPEHNVMS-WTAIITAYVQSGECDKEAIELFCKMISG-HIR 351

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  +  +V+ ACGNL   + G+ ++  A+K  +     V N+LI+MY R   ++ A   
Sbjct: 352 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 411

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVL 585
           F+  +  NL ++N ++  +++N     A  LF  +      IS     S+LS    +G +
Sbjct: 412 FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 471

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G+QIHG +   G++ N  I +AL+ MYS C               ++  +W+SMI+ +
Sbjct: 472 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 531

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG    A+E+FH+M  +G +P + + +++LSACSH G++ EG +++N+M +E+ + P 
Sbjct: 532 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 591

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+LGRSG L EA EFI ++P+     VW  +L AC  HG+T++G+  AE++ 
Sbjct: 592 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 651

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + EP++   YI LSN++ + G+WKD V+I K
Sbjct: 652 EQEPDDPAAYILLSNLHASAGQWKDVVKIRK 682



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 176/686 (25%), Positives = 334/686 (48%), Gaps = 68/686 (9%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M ++    D TT  I++ +  +    + G++VH   +++G+  DS + N  +++Y+KCGD
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 124 LNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAV 181
             ++   F GM +  D VSW+ ++S C  NN  E + +  F +M   G   +    ++ +
Sbjct: 95  TETARLIFEGMGNKRDLVSWSAMVS-CFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 153

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTCK 240
            A +       G++I+   +K GY ++  V V   LI M+ +  GD+ +A + F  M  +
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEAD-VCVGCELIDMFVKGSGDLGSAYKVFDKMPER 212

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++V+W  +I  FA  G   +A DL  +M+L   V PD  T  +++S C +  LL  G+ +
Sbjct: 213 NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQL 271

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSK---SNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           H   IR  L  D+ +  SL+D Y+K     S+  +  +F  + P ++++SW ++I+    
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM-PEHNVMSWTAIITAYVQ 330

Query: 355 ----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                     LF +M+      + FSFS++L    + + P +   G+ ++ + +KLG ++
Sbjct: 331 SGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYT---GEQVYSYAVKLGIAS 387

Query: 402 -NTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            N +G N+L+ MY   G   D   AF +L       +   +N ++    +N   +EA   
Sbjct: 388 VNCVG-NSLISMYARSGRMEDARKAFDIL----FEKNLVSYNAIVDGYAKNLKSEEAFLL 442

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  +         + T  +++S   ++    +G+ +HG  LK     +  + NALI+MY 
Sbjct: 443 FNEIA-DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 501

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVS 574
           RC +I++A  VF    + N+ +W  MI+ F+++    RALE+F  +     +PNEI+ V+
Sbjct: 502 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 561

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +LSAC+ +G++  G Q H   F+  ++E+  +                ++ M+   G  G
Sbjct: 562 VLSACSHVGMISEG-QKH---FNSMYKEHGIVPRM-----------EHYACMVDLLGRSG 606

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
              EA+E  + M      P  +  +   +LL AC   G  + G      +LE+    P  
Sbjct: 607 LLVEAMEFINSM------PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 660

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNL 717
             ++ + ++   +G+ ++  +  K++
Sbjct: 661 --YILLSNLHASAGQWKDVVKIRKSM 684



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 134/552 (24%), Positives = 254/552 (46%), Gaps = 53/552 (9%)

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G+   AF  L ++   ++  PD+ T   L+  C      + G+ VH   ++  L  D ++
Sbjct: 23  GRLHHAFSTL-DLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 81

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC 363
           +N+L+  YSK      A L+F  +    DLVSW++M+S              F +ML L 
Sbjct: 82  LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYIN-CGDLVA 421
              +     A++ +C++      G+ I+ + +K G+    + V   L+ M++   GDL +
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A+ +  ++   +  + W ++I    Q G  ++AI  F  M +     PD  T  +V+SAC
Sbjct: 202 AYKVFDKMPERNLVT-WTLMITRFAQLGCARDAIDLFLDM-ELSGYVPDRFTYSSVLSAC 259

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR---DIKSASTVFESCYNCNLC 538
             L L   GK LH   ++  + LD  V  +L+ MY +C     +  +  VFE     N+ 
Sbjct: 260 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 319

Query: 539 TWNCMISAFSQN-KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
           +W  +I+A+ Q+ + +  A+ELF  +      PN  S  S+L AC  L     G+Q++ +
Sbjct: 320 SWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 379

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
              LG    + + ++L+ MY+                 K+  ++++++  Y  + K  EA
Sbjct: 380 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 439

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC--I 697
             LF+E+ ++GI  +  +  SLLS  +  G + +G Q +  +L+      ++   +C  +
Sbjct: 440 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG---GYKSNQCICNAL 496

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL----- 752
           + M  R G ++ A++    +  +     W +M++  + HG      +  E+  K+     
Sbjct: 497 ISMYSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHG---FATRALEMFHKMLETGT 552

Query: 753 EPENVGYYISLS 764
           +P  + Y   LS
Sbjct: 553 KPNEITYVAVLS 564



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 253/528 (47%), Gaps = 28/528 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +L++ YS     E++  +F    NK D+V+W+AM++    N      +  F +M+E G  
Sbjct: 84  TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 143

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAK-CGDLNSSE 128
            +      ++ A +  N    G +++   +K G + AD  +    ++M+ K  GDL S+ 
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 203

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + V+W  +++           +  F +M  SG   D  + SS ++A   LG
Sbjct: 204 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSW 245
            L+ GK +H+  I+LG   +  V V  SL+ MY++C   G ++ + + F  M   +V+SW
Sbjct: 264 LLALGKQLHSRVIRLGL--ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321

Query: 246 NAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            AII  +  +G+ + EA +L  +M +   + P+  +  +++  C +      G  V+ YA
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 380

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++  +     + NSL+  Y++S  +  A   F+ +   N LVS+N+++ G          
Sbjct: 381 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN-LVSYNAIVDGYAKNLKSEEA 439

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF E+       S  T  ++L    S  ++  G+ IH   LK G+ +N    NAL+ M
Sbjct: 440 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 499

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG++ AAF +   +   +  S W  +I    ++G    A++ F  M  +    P+ +
Sbjct: 500 YSRCGNIEAAFQVFNEMEDRNVIS-WTSMITGFAKHGFATRALEMFHKML-ETGTKPNEI 557

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGR 518
           T V V+SAC ++ +  EG+  H  ++    G+  R+++   ++ + GR
Sbjct: 558 TYVAVLSACSHVGMISEGQK-HFNSMYKEHGIVPRMEHYACMVDLLGR 604



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 226/473 (47%), Gaps = 21/473 (4%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S+  +F +   +++VTW  MIT   +  C    +  F +M   G   D  T   ++SA T
Sbjct: 201 SAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 260

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADTVS 141
           ++  L  G+ +H   I+ G+  D  +    V+MYAKC   G ++ S   F  M   + +S
Sbjct: 261 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 320

Query: 142 WNTIMSGCLHNNYPEK-CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           W  I++  + +   +K  +  F +M     + ++ S SS + A   L +   G+ +++  
Sbjct: 321 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 380

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +KLG   +    V NSLISMY++ G +E A +AF  +  K++VS+NAI+DG+A N K EE
Sbjct: 381 VKLGI--ASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 438

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           AF L +E+     +     T  +L+S  A    + +G  +HG  ++     +  + N+L+
Sbjct: 439 AFLLFNEIADT-GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 497

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             YS+  ++  A  +FN +   N ++SW SMI+G            +F +ML   ++ + 
Sbjct: 498 SMYSRCGNIEAAFQVFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 556

Query: 369 STLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            T +A+L +C+    +  G K  +    + G          ++ +    G LV A   + 
Sbjct: 557 ITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFIN 616

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            +   +D   W  ++ AC  +G+ +      + + +Q+   P +  L++ + A
Sbjct: 617 SMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 669



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 174/332 (52%), Gaps = 7/332 (2%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           + S  +F +    +V++W A+ITA V++  C    +  F +M+   IR +  +   ++ A
Sbjct: 304 DDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA 363

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
              ++    G  V+  ++K G+ + + + N  ++MYA+ G +  +   F  +   + VS+
Sbjct: 364 CGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSY 423

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N I+ G   N   E+  L F E+  +G      + +S ++ +A +G +  G+ IH   +K
Sbjct: 424 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 483

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            GY+ +    + N+LISMYS+CG+IEAA + F  M  ++V+SW ++I GFA +G    A 
Sbjct: 484 GGYKSNQ--CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 541

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN--SLM 320
           ++ H+M L    +P+  T V ++S C+   ++ EG+  H  ++ +  G    M +   ++
Sbjct: 542 EMFHKM-LETGTKPNEITYVAVLSACSHVGMISEGQK-HFNSMYKEHGIVPRMEHYACMV 599

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           D   +S  L +A    N++  M D + W +++
Sbjct: 600 DLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/276 (19%), Positives = 127/276 (46%), Gaps = 5/276 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL++ Y+     E +   F     K++V++NA++    +N         F E+ + GI  
Sbjct: 394 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 453

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            + T   ++S    +  + +G  +H   +K G  ++  +CN  ++MY++CG++ ++   F
Sbjct: 454 SAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVF 513

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           + M   + +SW ++++G   + +  + L  F +M  +G + + ++  + ++A + +G +S
Sbjct: 514 NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMIS 573

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAAERAFWGMTCKDVVSWNAIID 250
            G+  H   +   +   P +     ++ +  + G  +EA E         D + W  ++ 
Sbjct: 574 EGQK-HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLG 632

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
              ++G  E      H  +++   EPD      L+S
Sbjct: 633 ACRVHGNTELG---RHAAEMILEQEPDDPAAYILLS 665



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ ++     +L++ YS     E++  +F E  +++V++W +MIT   ++      L  F
Sbjct: 485 GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMF 544

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M+E G + +  T + ++SA + +  + +G +  + +  + G++         V++  +
Sbjct: 545 HKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGR 604

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            G L  +    + M   AD + W T++  C +H N
Sbjct: 605 SGLLVEAMEFINSMPLMADALVWRTLLGACRVHGN 639


>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
 gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
          Length = 846

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 228/804 (28%), Positives = 381/804 (47%), Gaps = 60/804 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y        ++A+F+    K+V TW  +I A   N      +  F EM   G++ D
Sbjct: 36  LIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSD 95

Query: 73  STTLLIIVSALTQMNC--LKQGRVVHCLSIKAGMIADSS---LCNV-FVNMYAKCGDLNS 126
             T   I+ A + +    L  G+ +H    + G+   S+   +C+   ++ YA+ G +  
Sbjct: 96  EFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQ 155

Query: 127 SECTFSGMHC----ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           +   F  M       D ++W  +M+      +  + LL FR+M   G + D  +  +A+ 
Sbjct: 156 AAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAID 215

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A + +  L  G V+H+  +    E    V   N+L++ Y++ G +  +   F  M  K+V
Sbjct: 216 ACSSIPSLEQGTVLHSRLLASSVECDGVVG--NALLNFYAKAGLVHESRSLFSSMKVKNV 273

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL--ISLCADSLLLREGRSV 300
           V+W+AI+  +A NG  E A +L  EM L+  + P+  T+  L  +  C     L + R +
Sbjct: 274 VTWSAIVAAYAQNGHHEPAVELFREM-LLDGIAPNKVTIALLRIVEACDQPDALDQAREL 332

Query: 301 HG-YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           H  +        D+++  +L++ Y +  S+S A+ +F+ +   N + SWN+M+       
Sbjct: 333 HTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRN-ITSWNAMLVTYSLNQ 391

Query: 360 LYLCSQFSFSTLL----AILP----------SCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
             L +   F T+L     + P          +C     L     IH    +   SN T  
Sbjct: 392 RSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDV 451

Query: 406 V--NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           V  +AL+ MY NC  L  A  +L  +   +  S W  +I+AC QN   + AI  +++M Q
Sbjct: 452 VLGSALIKMYGNCRSLAGAAQVLDEMPRTNVIS-WTSMILACEQNEDNEAAIHVYRAM-Q 509

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
                PD VT+V VI A  NL     G   H  A        T V NAL+T+YG   D++
Sbjct: 510 LHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQ 569

Query: 524 SASTVFESCYNC---NLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILS 577
           +A  VF+        ++ TWN M+SA++QN    +AL  F+   H    P++ + V+IL+
Sbjct: 570 AAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNILN 629

Query: 578 ACT-QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
           AC      L    +IH      G   ++ +++ LL MYS C               K+  
Sbjct: 630 ACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKVFHAITQKNVV 689

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +WS+M +A  ++G    A++ F  M + GI+P   + IS+LS CSH+GL+DE + Y   M
Sbjct: 690 SWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAM 749

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
             +++++P  +H+ C++D+L R+GK   A E   +L   P P  W ++L AC  HGD + 
Sbjct: 750 SSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHL---PNPVAWNSLLGACLVHGDAET 806

Query: 742 GKQVAELLFKLEPENVGYYISLSN 765
             + A+   KL+P +   Y+SLSN
Sbjct: 807 AARAADTAAKLQPLDCAPYVSLSN 830



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 188/729 (25%), Positives = 345/729 (47%), Gaps = 61/729 (8%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH   I +G   D  LCN+ + MY +C  ++ +   F  +   +  +W  ++  
Sbjct: 11  LDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVA 70

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHAL----GIK 202
             HN    + +  FREM   G Q+D  + S+ + A + LG   LS GK IH+     G+K
Sbjct: 71  HTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLK 130

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK----DVVSWNAIIDGFALNGKF 258
           L    +P V  + ++I  Y+Q G IE A   F  M  +    D+++W A++  +   G  
Sbjct: 131 L--TSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHA 188

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            EA  L  +M L + +EPD    V  I  C+    L +G  +H   +   +  D ++ N+
Sbjct: 189 REALLLFRKMDL-QGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGNA 247

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY--LCS 364
           L++FY+K+  + ++  LF+++   N +V+W+++++             LF+EML   +  
Sbjct: 248 LLNFYAKAGLVHESRSLFSSMKVKN-VVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAP 306

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAF 423
                 LL I+ +C+ P++L+  + +H         + + +   AL++MY  CG +  A 
Sbjct: 307 NKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAK 366

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVISACG 482
           ++   + H + TS WN ++V  + N    EA++ F++M  + +   PD++T V+   ACG
Sbjct: 367 TVFDEMQHRNITS-WNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACG 425

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
            +        +H    +S     T V   +ALI MYG CR +  A+ V +     N+ +W
Sbjct: 426 MMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISW 485

Query: 541 NCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             MI A  QN+    A+ ++R ++    +P+ +++V+++ A   L  L+ G + H     
Sbjct: 486 TSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAA 545

Query: 598 LGFQENSFISSALLDMY------------------SNCKSNAAWSSMISAYGYHGKGWEA 639
            GF  ++ + +AL+ +Y                   + +    W+SM+SA+  +G   +A
Sbjct: 546 FGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQA 605

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ--YYNNMLEEYDVRPETEHHVCI 697
           +  F  M + G  P K++ +++L+AC  +G   + LQ    + +     +  +T+    +
Sbjct: 606 LRTFQRMLHHGRHPDKTTFVNILNAC--AGDPSKLLQAVKIHALAAACGLDSDTDVANTL 663

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPE 755
           + M  R G L  A +    +  Q     W AM +AC+H+GD     Q    +    ++P 
Sbjct: 664 LHMYSRCGNLSRARKVFHAI-TQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPN 722

Query: 756 NVGYYISLS 764
            V +   LS
Sbjct: 723 AVTFISILS 731



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 157/557 (28%), Positives = 249/557 (44%), Gaps = 28/557 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+       S +LF     K+VVTW+A++ A  +N      +  F EM+ +GI  
Sbjct: 247 ALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAP 306

Query: 72  DSTT--LLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  T  LL IV A  Q + L Q R +H      A    D  +    VNMY +CG ++ ++
Sbjct: 307 NKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAK 366

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASAC 186
             F  M   +  SWN ++     N    + L +FR M   GE  + D ++  SA  A   
Sbjct: 367 TVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGM 426

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           +G+LS    IH+   +    +   V + ++LI MY  C  +  A +    M   +V+SW 
Sbjct: 427 MGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWT 486

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I     N   E A  +   MQL    +PD  T+VT+I   A+   L+ G   H  A  
Sbjct: 487 SMILACEQNEDNEAAIHVYRAMQL-HGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAA 545

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI--APMNDLVSWNSMIS-----GL---- 355
                  ++ N+L+  Y  S  L  AE +F  +    + D+V+WNSM+S     GL    
Sbjct: 546 FGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQA 605

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              F+ ML+       +T + IL +C   P  L     IH      G  ++T   N L+H
Sbjct: 606 LRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSDTDVANTLLH 665

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG+L  A  +   I+  +  S W+ +  AC  NG    A++ F+ M       P++
Sbjct: 666 MYSRCGNLSRARKVFHAITQKNVVS-WSAMAAACAHNGDADGALQAFRGML-HGGIQPNA 723

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF 529
           VT ++++S C +  L  E  S +  A+ S   L   VQ+   L+ +  R      A  + 
Sbjct: 724 VTFISILSGCSHTGLMDEAVS-YLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEEL- 781

Query: 530 ESCYNCNLCTWNCMISA 546
            + +  N   WN ++ A
Sbjct: 782 -ATHLPNPVAWNSLLGA 797



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 165/349 (47%), Gaps = 15/349 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y N      +  +  E    +V++W +MI AC +N      +H +  M   G +
Sbjct: 455 SALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHK 514

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ ++ A   ++ LK+G   H  +   G    + + N  V +Y   GDL ++E  
Sbjct: 515 PDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENV 574

Query: 131 FSGM---HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           F  +      D V+WN+++S    N  P + L  F+ M   G   D  +  + +  +AC 
Sbjct: 575 FKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNIL--NACA 632

Query: 188 GELS---YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           G+ S       IHAL    G +      V N+L+ MYS+CG++  A + F  +T K+VVS
Sbjct: 633 GDPSKLLQAVKIHALAAACGLDSD--TDVANTLLHMYSRCGNLSRARKVFHAITQKNVVS 690

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-VHGY 303
           W+A+    A NG  + A      M L   ++P+  T ++++S C+ + L+ E  S ++  
Sbjct: 691 WSAMAAACAHNGDADGALQAFRGM-LHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAM 749

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +    L   +     L+D  +++    +AE L   +    + V+WNS++
Sbjct: 750 SSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLP---NPVAWNSLL 795



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 33/379 (8%)

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++L+ G+++H   +  G+  +    N L+ MY  C  +  A ++   +S   +   W I+
Sbjct: 9   KNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVS-RKNVFTWTIL 67

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF--EGKSLHGLALK 499
           IVA T NG F EA++ F+ M        D  T   ++ AC NL LAF   GK++H    +
Sbjct: 68  IVAHTHNGLFFEAVELFREM-DVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQ 126

Query: 500 SLMGLDTRV----QNALITMYGRCRDIKSASTVFESC----YNCNLCTWNCMISAFSQNK 551
             + L +        A+I  Y +   I+ A+ +FE       + +L  W  M++A++Q  
Sbjct: 127 QGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLG 186

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL LFR ++    EP+  + V+ + AC+ +  L  G  +H  +     + +  + +
Sbjct: 187 HAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDGVVGN 246

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           ALL+ Y+                 K+   WS++++AY  +G    A+ELF EM   GI P
Sbjct: 247 ALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAP 306

Query: 654 TKSSV--ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            K ++  + ++ AC     +D+  + +           +      +V+M GR G + +A 
Sbjct: 307 NKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAK 366

Query: 712 EFIKNLPIQPKPGVWGAML 730
                +        W AML
Sbjct: 367 TVFDEMQ-HRNITSWNAML 384



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +LL  YS       +  +F+    K+VV+W+AM  AC  N      L  F  M+  GI
Sbjct: 660 ANTLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGI 719

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV------FVNMYAKCGD 123
           + ++ T + I+S      C   G +   +S    M +D +L          +++ A+ G 
Sbjct: 720 QPNAVTFISILSG-----CSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGK 774

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCL 150
            + +E      H  + V+WN+++  CL
Sbjct: 775 FHRAEEL--ATHLPNPVAWNSLLGACL 799


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 176/587 (29%), Positives = 296/587 (50%), Gaps = 99/587 (16%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L+S Y+ CGD++   R F  M  K+V  WN ++  +A  G F+E               
Sbjct: 1   KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE--------------- 45

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
                     S+C   +++ +G  + G                      +S S S+   L
Sbjct: 46  ----------SICLFKIMVEKG--IEG---------------------KRSESASE---L 69

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ +    D++SWNSMISG            ++K+M+YL      +T++++L  C    +
Sbjct: 70  FDKLCD-RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGT 128

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  GK++H   +K  F       N L+ MY  CGDL  A  + +++   +  S W  +I 
Sbjct: 129 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS-WTSMIA 187

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
             T++G    AI   + M +++    D V + +++ AC        GK +H     + M 
Sbjct: 188 GYTRDGWSDGAIILLQQM-EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMA 246

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V NAL+ MY +C  ++ A++VF +    ++ +WN M+                   
Sbjct: 247 SNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------------ 288

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
           E +P+  ++  IL AC  L  L  GK+IHG++   G+  +  +++AL+D+Y  C      
Sbjct: 289 ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 348

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K   +W+ MI+ YG HG G EAI  F+EM ++GI P + S IS+L ACSHS
Sbjct: 349 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 408

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GL+++G +++  M  ++++ P+ EH+ C+VD+L R+G L +AY+FI+ LPI P   +WGA
Sbjct: 409 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 468

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           +L  C  + D ++ ++VAE +F+LEPEN GYY+ L+N+Y    +W++
Sbjct: 469 LLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEE 515



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 216/422 (51%), Gaps = 39/422 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM-------------- 134
           LK+GR V     K  +     L N  V+ YAK GD   S C F  M              
Sbjct: 12  LKEGRRVFDTMEKKNVY----LWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESAS 67

Query: 135 -----HC-ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
                 C  D +SWN+++SG + N   E+ L  +++M + G   D  ++ S +   A  G
Sbjct: 68  ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSG 127

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            LS GK +H+L IK  +E    ++ +N+L+ MYS+CGD++ A R F  M  ++VVSW ++
Sbjct: 128 TLSLGKAVHSLAIKSSFERR--INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  +G  + A  LL +M+    V+ D+  + +++  CA S  L  G+ VH Y     
Sbjct: 186 IAGYTRDGWSDGAIILLQQME-KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
           +  +L + N+LMD Y+K  S+  A  +F+ +  + D++SWN+M+  L         +   
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMV-VKDIISWNTMVGEL---------KPDS 294

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            T+  ILP+C S  +LE GK IH + L+ G+S++    NAL+ +Y+ CG L  A  L   
Sbjct: 295 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 354

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           I  + D   W ++I     +G+  EAI TF  M +     PD V+ ++++ AC +  L  
Sbjct: 355 IP-SKDLVSWTVMIAGYGMHGYGNEAIATFNEM-RDAGIEPDEVSFISILYACSHSGLLE 412

Query: 489 EG 490
           +G
Sbjct: 413 QG 414



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 205/441 (46%), Gaps = 50/441 (11%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           ES+  LF + C++DV++WN+MI+  V N     GL  + +M+  GI  D  T++ ++   
Sbjct: 64  ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 123

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            +   L  G+ VH L+IK+      +  N  ++MY+KCGDL+ +   F  M   + VSW 
Sbjct: 124 AKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 183

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++++G   + + +  ++  ++M   G + D V+++S + A A  G L  GK +H   IK 
Sbjct: 184 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKA 242

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
               S  + V N+L+ MY++CG +E A   F  M  KD++SWN ++              
Sbjct: 243 NNMASN-LFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------- 288

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                     ++PD  T+  ++  CA    L  G+ +HGY +R     D  + N+L+D Y
Sbjct: 289 ---------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 339

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTL 371
            K   L  A LLF+ I P  DLVSW  MI+G             F EM     +    + 
Sbjct: 340 VKCGVLGLARLLFDMI-PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFS 424
           ++IL +C+    LE G     W+       N   +   +  Y          G+L  A+ 
Sbjct: 399 ISILYACSHSGLLEQG-----WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            ++ +    D + W  ++  C
Sbjct: 453 FIETLPIAPDATIWGALLCGC 473



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 165/355 (46%), Gaps = 29/355 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S +LL  YS     + +L +F +   ++VV+W +MI     +      +    
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M +EG++ D   +  I+ A  +   L  G+ VH       M ++  +CN  ++MYAKCG
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 263

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            +  +   FS M   D +SWNT++                      GE + D+ +++  +
Sbjct: 264 SMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMACIL 301

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  GK IH   ++ GY    +V+  N+L+ +Y +CG +  A   F  +  KD
Sbjct: 302 PACASLSALERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSKD 359

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL +G    
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFF 418

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y ++     +  L     ++D  S++ +LSKA      +    D   W +++ G
Sbjct: 419 -YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 208/740 (28%), Positives = 343/740 (46%), Gaps = 89/740 (12%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           + L  G+  H   + +G +    + N  + MYA+CG    +   F  M   DTVSWNT++
Sbjct: 45  SALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTML 104

Query: 147 SGCLHNN-----------YPEKCLL-------------YFR-------EMGWSGEQADNV 175
           +   H              P+  ++              FR       EM   G   D  
Sbjct: 105 TAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRT 164

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L+  + A   L +L+ G  IHAL +K G E    V   ++L+ MY +C  +E A   F 
Sbjct: 165 TLAVLLKACGGLDDLALGVQIHALAVKTGLEMD--VRAGSALVDMYGKCRSLEDALHFFH 222

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           GM  ++ VSW A+I G   N ++            MR +E        L+  C     L 
Sbjct: 223 GMGERNSVSWGAVIAGCVQNEQY------------MRGLE--------LLCRCKAITCLS 262

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
             R +H +AI+     D ++  +++D Y+K++SL  A   F  + P + + + N+M+ GL
Sbjct: 263 TARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGL-PNHTVETCNAMMVGL 321

Query: 356 FKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            +  L       F F T   I     S      G    C ++K GF  +    NA++ +Y
Sbjct: 322 VRTGLGAEAMQLFQFMTRSGIGFGVVSLS----GVFSACAEVK-GFDVDVCVRNAILDLY 376

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  LV A+ + Q +    D+  WN +I A  QN  +++ I     M +      D  T
Sbjct: 377 GKCKALVEAYLVFQEMEQR-DSVSWNTIIAALEQNECYEDTIVHLNEMLRS-GMEADDFT 434

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
             +V+ AC  L+    G  +HG A+KS +GLD  V + ++ MY +C  I  A  + +   
Sbjct: 435 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIG 494

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
              L +WN +I+ FS NK    A + F  +     +P+  +  ++L +C  L  +  GKQ
Sbjct: 495 GQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQ 554

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGK 635
           IHG +       + FISS L+DMY+ C +                 +W++MI  Y  HG+
Sbjct: 555 IHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQ 614

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G+EA+E+F     + + P  ++ +++L ACSH GL+D+G +Y++ M   Y + P+ EH  
Sbjct: 615 GFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFA 674

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+          QEA +FI+++P++    +W  +LS C    D ++ +  A  + +L+P+
Sbjct: 675 CM--------GPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPD 726

Query: 756 NVGYYISLSNMYVALGRWKD 775
           +   YI LSN+Y   G+W D
Sbjct: 727 DSSVYILLSNVYAESGKWVD 746



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/594 (26%), Positives = 270/594 (45%), Gaps = 59/594 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV--VMGLHFFGEMVEEGI 69
           ++LTAY+++     + +L     + DVV+WNA+++   +      ++GL    EM   G+
Sbjct: 102 TMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSI--EMARCGV 159

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D TTL +++ A   ++ L  G  +H L++K G+  D    +  V+MY KC  L  +  
Sbjct: 160 APDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALH 219

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F GM   ++VSW  +++GC+ N        Y R           + L     A  C   
Sbjct: 220 FFHGMGERNSVSWGAVIAGCVQNEQ------YMR----------GLELLCRCKAITC--- 260

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS  + +HA  IK  +     V    +++ +Y++   +  A RAF+G+    V + NA++
Sbjct: 261 LSTARQLHAHAIKNKFSSDRVVG--TAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMM 318

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G    G   EA  L   M     +   + ++  + S CA+         V G+ +    
Sbjct: 319 VGLVRTGLGAEAMQLFQFMT-RSGIGFGVVSLSGVFSACAE---------VKGFDV---- 364

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FK 357
             D+ + N+++D Y K  +L +A L+F  +    D VSWN++I+ L              
Sbjct: 365 --DVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNTIIAALEQNECYEDTIVHLN 421

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           EML    +    T  ++L +C   +SLE+G  +H   +K G   +    + ++ MY  CG
Sbjct: 422 EMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCG 481

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  L  RI      S WN +I   + N   +EA K F  M       PD  T   V
Sbjct: 482 MITEALKLHDRIGGQELVS-WNSIIAGFSLNKQSEEAQKFFSEML-DMGVKPDHFTYATV 539

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + +C NL     GK +HG  +K  M  D  + + L+ MY +C ++  +  +FE     + 
Sbjct: 540 LDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDF 599

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
            +WN MI  ++ +     ALE+F   +     PN  + V++L AC+ +G+L  G
Sbjct: 600 VSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDG 653



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 156/628 (24%), Positives = 278/628 (44%), Gaps = 90/628 (14%)

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-------- 234
           ASA    L+ G+  HA  +  G+   P + V+N L+ MY++CG    A   F        
Sbjct: 40  ASAGHSALATGQAAHARMLVSGF--VPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDT 97

Query: 235 --WG---------------------MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
             W                      M   DVVSWNA++ G+   G F +   L  EM   
Sbjct: 98  VSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARC 157

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V PD  T+  L+  C     L  G  +H  A++  L  D+   ++L+D Y K  SL  
Sbjct: 158 -GVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLED 216

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           A   F+ +   N  VSW ++I+G  +   Y+         L +L  C +   L   + +H
Sbjct: 217 ALHFFHGMGERNS-VSWGAVIAGCVQNEQYMRG-------LELLCRCKAITCLSTARQLH 268

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              +K  FS++ +   A++ +Y     LV A      + +++  +C N ++V   + G  
Sbjct: 269 AHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETC-NAMMVGLVRTGLG 327

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EA++ F+ MT +       V+L  V SAC  ++  F+              +D  V+NA
Sbjct: 328 AEAMQLFQFMT-RSGIGFGVVSLSGVFSACAEVK-GFD--------------VDVCVRNA 371

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEP 567
           ++ +YG+C+ +  A  VF+     +  +WN +I+A  QN+      V   E+ R    E 
Sbjct: 372 ILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRS-GMEA 430

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           ++ +  S+L AC  L  L +G  +HG     G   ++F+SS ++DMY  C          
Sbjct: 431 DDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLH 490

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                +   +W+S+I+ +  + +  EA + F EM + G++P   +  ++L +C++   ++
Sbjct: 491 DRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIE 550

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAM 729
            G Q +  ++++  +  E      +VDM  + G + ++   +E ++ L        W AM
Sbjct: 551 LGKQIHGQIIKQEMLGDEFISST-LVDMYAKCGNMPDSQLMFEKVQKLDFVS----WNAM 605

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENV 757
           +   + HG    G +  E+  + +  NV
Sbjct: 606 ICGYALHGQ---GFEALEMFERTQKANV 630



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 222/501 (44%), Gaps = 52/501 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   ++L+  Y      E +L  F+    ++ V+W A+I  CV+N   + GL   
Sbjct: 193 GLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLE-- 250

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                         LL    A+T   CL   R +H  +IK    +D  +    V++YAK 
Sbjct: 251 --------------LLCRCKAIT---CLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKA 293

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F G+      + N +M G +      + +  F+ M  SG     VSLS   
Sbjct: 294 DSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVF 353

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +                G++    V V N+++ +Y +C  +  A   F  M  +D
Sbjct: 354 SACAEVK---------------GFDVD--VCVRNAILDLYGKCKALVEAYLVFQEMEQRD 396

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II     N  +E+    L+EM L   +E D  T  +++  CA    L  G  VH
Sbjct: 397 SVSWNTIIAALEQNECYEDTIVHLNEM-LRSGMEADDFTYGSVLKACAGLQSLEYGLVVH 455

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G AI+  LG D  + ++++D Y K   +++A  L + I    +LVSWNS+I+G       
Sbjct: 456 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGG-QELVSWNSIIAGFSLNKQS 514

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F EML +  +    T   +L SC +  ++E GK IH   +K     +    + L
Sbjct: 515 EEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTL 574

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG++  +  + +++    D   WN +I     +G   EA++ F+  TQ+ N +P
Sbjct: 575 VDMYAKCGNMPDSQLMFEKV-QKLDFVSWNAMICGYALHGQGFEALEMFER-TQKANVAP 632

Query: 470 DSVTLVNVISACGNLELAFEG 490
           +  T V V+ AC ++ L  +G
Sbjct: 633 NHATFVAVLRACSHVGLLDDG 653



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 150/297 (50%), Gaps = 3/297 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   +    ++L  Y        +  +F E   +D V+WN +I A  +N C    +  
Sbjct: 360 KGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVH 419

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             EM+  G+  D  T   ++ A   +  L+ G VVH  +IK+G+  D+ + +  V+MY K
Sbjct: 420 LNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCK 479

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  +      +   + VSWN+I++G   N   E+   +F EM   G + D+ + ++ 
Sbjct: 480 CGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATV 539

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + + A L  +  GK IH   IK       ++S T  L+ MY++CG++  ++  F  +   
Sbjct: 540 LDSCANLATIELGKQIHGQIIKQEMLGDEFISST--LVDMYAKCGNMPDSQLMFEKVQKL 597

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           D VSWNA+I G+AL+G+  EA ++    Q   +V P+ AT V ++  C+   LL +G
Sbjct: 598 DFVSWNAMICGYALHGQGFEALEMFERTQ-KANVAPNHATFVAVLRACSHVGLLDDG 653



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 38/195 (19%)

Query: 462 TQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           T  Q A   + T  +V   C   G+  LA  G++ H   L S       V N L+ MY R
Sbjct: 20  TPAQAAFLATATFSHVYQLCASAGHSALA-TGQAAHARMLVSGFVPTMFVSNCLLQMYAR 78

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL------------------- 559
           C     A  VF++  + +  +WN M++A++       A  L                   
Sbjct: 79  CGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGY 138

Query: 560 -----FRHL----------EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                FR L             P+  ++  +L AC  L  L  G QIH      G + + 
Sbjct: 139 CQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDV 198

Query: 605 FISSALLDMYSNCKS 619
              SAL+DMY  C+S
Sbjct: 199 RAGSALVDMYGKCRS 213


>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 191/612 (31%), Positives = 311/612 (50%), Gaps = 52/612 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H   I  G +  P++     L+ MY+ CGD+ +A+  F  ++  +V +W AI+
Sbjct: 39  LHQGKQLHQHIILCGLDHHPFM--LTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAIL 96

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             ++ NG  +E      EM+L + V PD      +   C   L L  G  VH   +    
Sbjct: 97  GFYSRNGLSDECVRTYSEMKL-KGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGC 155

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
            +DL + NSL+D YSKS  +     +F+ +    D++SWNSMISG      Y+C+ F   
Sbjct: 156 EFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVE-RDVLSWNSMISG------YVCNGF--- 205

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
                         LEF   +       GF  + +  N +M  Y   G    A+ + ++I
Sbjct: 206 --------------LEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQI 251

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +  S   +V    ++ G+ ++++  F+ M  ++ A PD  +L +V+ +C +L     
Sbjct: 252 KEPNIISLTTLV-SGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVC 310

Query: 490 GKSLHGLALKSL--MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           G+ +HG  ++S+           AL+TMY +C+ I+ A  VFE     ++ TWN MI  F
Sbjct: 311 GQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGF 370

Query: 548 SQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
              +    ALE F  ++      N+I+I ++L AC     L+ GKQ+H ++    F    
Sbjct: 371 VDLEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVI 426

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + +AL+ MYS C               +   +W++MI  +G HG G  A++L  +M +S
Sbjct: 427 PVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHS 486

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
            + P   +  S LSACSHSGLVDEG++ ++ M  ++   P  EH  C+VD+L R+ +L++
Sbjct: 487 DVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLED 546

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A  FI+ +P++P   +W A+L+AC    +  + K  AE LF+LEPE+ G Y++LSN+Y  
Sbjct: 547 AVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYAR 606

Query: 770 LGRWKDAVEIGK 781
            GRW DAV + K
Sbjct: 607 AGRWDDAVAVRK 618



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 168/650 (25%), Positives = 280/650 (43%), Gaps = 103/650 (15%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QG+ +H   I  G+     +    V MYA CGDL S++  F  +   +  +W  I+  
Sbjct: 39  LHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGF 98

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N   ++C+  + EM   G   D         A   L  L  G  +H   +  G E  
Sbjct: 99  YSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFD 158

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + V NSLI MYS+ GD+ +  R F  M  +DV+SWN++I G+  NG  E + +LL  M
Sbjct: 159 --LQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASM 216

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           ++ R  EPD+ T                                    N++MD Y +   
Sbjct: 217 RI-RGFEPDMVT-----------------------------------WNTVMDAYCRMGL 240

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQF-SFSTLLAIL 375
             +A  +F  I   N ++S  +++S            G+F+EM+     F    +L ++L
Sbjct: 241 CDEAWEIFEQIKEPN-IISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVL 299

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNN---TIGVNALMHMYINCG---DLVAAFSLLQRI 429
            SC    +L  G+ IH + ++   S++   + G  AL+ MY+ C    D +  F L+ R 
Sbjct: 300 VSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGA-ALLTMYVKCKRIQDALNVFELMDRF 358

Query: 430 SHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
               D   WN +I+     + GH   A++ F  M Q+     + +T+  V+ AC +L+  
Sbjct: 359 ----DVVTWNAMILGFVDLEMGHL--ALECFSKM-QRSGIMNNQITISTVLPAC-DLK-- 408

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             GK +H    K+       V NALI MY +C  I +A ++F +  + +L +WN MI  F
Sbjct: 409 -SGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGF 467

Query: 548 SQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQI-HGHVFHLGFQEN 603
             +     AL+L R   H +  PN ++  S LSAC+  G++  G ++ H      GF   
Sbjct: 468 GMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPG 527

Query: 604 SFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
               S ++D+ +                   +  +A+    +M    ++P+K    +LL+
Sbjct: 528 MEHFSCVVDLLARAD----------------RLEDAVGFIEKM---PLKPSKHIWSALLA 568

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEH---HVCIVDMLGRSGKLQEA 710
           AC     V         +  E   + E EH   +V + ++  R+G+  +A
Sbjct: 569 ACRAQQNVSVA-----KLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDA 613



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 220/576 (38%), Gaps = 96/576 (16%)

Query: 4   LAHLP-TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L H P   T L+  Y++     S+ ALF +    +V  W A++     N      +  + 
Sbjct: 54  LDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYS 113

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM  +G+  D      +  A  Q+  L+ G  VH   +  G   D  +CN  ++MY+K G
Sbjct: 114 EMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSG 173

Query: 123 DLNSSECTF---------------SGMHC--------------------ADTVSWNTIM- 146
           D+ S    F               SG  C                     D V+WNT+M 
Sbjct: 174 DVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMD 233

Query: 147 ------------------------------SGCLHNNYPEKCLLYFREMGWSGEQA--DN 174
                                         SG       EK L  FREM  S   A  D 
Sbjct: 234 AYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREM-MSRRVAFPDL 292

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            SLSS + +   LG L  G+ IH  GI+     S Y S   +L++MY +C  I+ A   F
Sbjct: 293 DSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVF 352

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M   DVV+WNA+I GF        A +   +MQ    +   I T+ T++  C     L
Sbjct: 353 ELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQI-TISTVLPACD----L 407

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           + G+ VH Y  +      + + N+L+  YSK   +  A  +F+ +    DLVSWN+MI G
Sbjct: 408 KSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMIS-RDLVSWNTMIGG 466

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI----------------HCWQLKLG 398
                L    QF+   L  +  S   P S+ F  ++                H      G
Sbjct: 467 FGMHGL---GQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFG 523

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F+      + ++ +      L  A   ++++        W+ ++ AC    +   A    
Sbjct: 524 FTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAA 583

Query: 459 KSMTQ-QQNASPDSVTLVNVISACGNLELAFEGKSL 493
           + + Q +   + + VTL N+ +  G  + A   + L
Sbjct: 584 EQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKL 619



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 17/302 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            +LLT Y      + +L +F      DVVTWNAMI   V+     + L  F +M   GI 
Sbjct: 333 AALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIM 392

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T+  ++ A      LK G+ VH    K    +   + N  ++MY+KCG + ++   
Sbjct: 393 NNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSI 448

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS M   D VSWNT++ G   +   +  L   R+M  S    ++V+ +SA++A +  G +
Sbjct: 449 FSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLV 508

Query: 191 SYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAI 248
             G ++ H +    G+  +P +   + ++ + ++   +E A      M  K     W+A+
Sbjct: 509 DEGMELFHTMTRDFGF--TPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSAL 566

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIA-TVVTLISLCADSLLLREGRSVHGYAIRR 307
           +   A   +   +   L   QL + +EP+ A   VTL ++ A     R GR     A+R+
Sbjct: 567 LA--ACRAQQNVSVAKLAAEQLFQ-LEPEHAGNYVTLSNIYA-----RAGRWDDAVAVRK 618

Query: 308 LL 309
           L+
Sbjct: 619 LM 620



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 36/337 (10%)

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTV 528
           S  L +++  C N +   +GK LH   +  L GLD    +   L+ MY  C D+ SA  +
Sbjct: 23  SFQLNHLLQLCSNSKALHQGKQLHQHII--LCGLDHHPFMLTKLVQMYADCGDLGSAQAL 80

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F+     N+  W  ++  +S+N      +  +  ++ +   P++     +  AC QL  L
Sbjct: 81  FDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWL 140

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G Q+H  V   G + +  + ++L+DMYS                 +   +W+SMIS Y
Sbjct: 141 EVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGY 200

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +G    ++EL   M   G  P   +  +++ A    GL DE  + +  + E     P 
Sbjct: 201 VCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKE-----PN 255

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ----PKPGVWGAMLSACSHHGDTKMGKQVA 746
                 +V    R G  +++    + +  +    P      ++L +C H G    G+++ 
Sbjct: 256 IISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIH 315

Query: 747 ELLFKLEPENVGYYIS----LSNMYVALGRWKDAVEI 779
               +   ++  +Y S    L  MYV   R +DA+ +
Sbjct: 316 GYGIR-SVDSSSFYKSAGAALLTMYVKCKRIQDALNV 351


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 175/574 (30%), Positives = 301/574 (52%), Gaps = 40/574 (6%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLR 295
           MT + +  WN ++   + +  +E+   + H  Q+ R  E PD  T+   +  C +   ++
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQV--MCHFSQMFRDEEKPDNFTLPVALKACGELREVK 58

Query: 296 EGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G  +HG+  + + LG DL + +SL+  Y K   +++A  +FN +    D+V+W+SM+SG
Sbjct: 59  YGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEK-PDIVTWSSMVSG 117

Query: 355 LFKE-MLYLCSQF------------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
             K    Y   +F               TL+ ++ +C    +   G+ +H + ++ GFSN
Sbjct: 118 FEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSN 177

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +   VN+L++ Y        A +L + ++   D   W+ VI    QNG   EA++ F  M
Sbjct: 178 DLSLVNSLLNCYAKSRAFKEAVNLFKMMAEK-DVISWSTVIACYVQNGAAAEALRVFNEM 236

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                  P+  T++ V+ AC       +G+  H LA++  +  + +V  AL+ MY +C  
Sbjct: 237 IDD-GTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 295

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILS 577
            + A  VF      ++ +W  +IS F+ N    R++E F  +  E    P+ I ++ +L 
Sbjct: 296 PEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLG 355

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C++LG L+  +  H +V   GF  N FI ++L+++YS C               K    
Sbjct: 356 SCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVV 415

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           W+S+I+ YG HGKG +A+E F+ M  S  ++P + + +S+LSACSH+GL+ EGL+ +  M
Sbjct: 416 WTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELM 475

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           + +Y + P  EH+  +VD+LGR G+L  A E  K +P  P P + G +L AC  H + +M
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 535

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            + VA+ LF+LE  + GYY+ +SNMY   G W++
Sbjct: 536 AETVAKQLFELESNHAGYYMLMSNMYGVKGEWEN 569



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 266/543 (48%), Gaps = 43/543 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL-- 199
           WNT++     + + E+ + +F +M    E+ DN +L  A+ A   L E+ YG++IH    
Sbjct: 9   WNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLK 68

Query: 200 -GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             + LG +    + V +SLI MY +CG +  A R F  +   D+V+W++++ GF  NG  
Sbjct: 69  KNVTLGSD----LYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSP 124

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            +A +    M     V PD  T++TL+S C      R GR VHG+ +RR    DL ++NS
Sbjct: 125 YQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNS 184

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQF 366
           L++ Y+KS +  +A  LF  +A   D++SW+++I+             +F EM+   ++ 
Sbjct: 185 LLNCYAKSRAFKEAVNLFKMMAE-KDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEP 243

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           + +T+L +L +C +   LE G+  H   ++ G         AL+ MY+ C     A+++ 
Sbjct: 244 NVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 303

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            RI    D   W  +I   T NG    +I+ F  M  + N  PD++ ++ V+ +C  L  
Sbjct: 304 SRIP-KKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGF 362

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             + +  H   +K     +  +  +L+ +Y RC  + +AS VF      +   W  +I+ 
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422

Query: 547 FSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
           +  +    +ALE F H+    E +PNE++ +SILSAC+  G++  G +I    F L    
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FEL---- 474

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                  +++ Y    +   ++ ++   G  G+   AIE+   M  S   PT   + +LL
Sbjct: 475 -------MVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFS---PTPQILGTLL 524

Query: 663 SAC 665
            AC
Sbjct: 525 GAC 527



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 213/472 (45%), Gaps = 28/472 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           + L   +SL+  Y        +L +F E    D+VTW++M++   +N      + FF  M
Sbjct: 75  SDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 134

Query: 65  -VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
                +  D  TL+ +VSA T+++  + GR VH   ++ G   D SL N  +N YAK   
Sbjct: 135 ATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRA 194

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F  M   D +SW+T+++  + N    + L  F EM   G + +  ++   + A
Sbjct: 195 FKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQA 254

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A   +L  G+  H L I+ G E    V V+ +L+ MY +C   E A   F  +  KDVV
Sbjct: 255 CAAANDLEQGRKTHELAIRKGLETE--VKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVV 312

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW A+I GF LNG    + +    M L  +  PD   ++ ++  C++   L++    H Y
Sbjct: 313 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSY 372

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            I+     +  +  SL++ YS+  SL  A  +FN IA + D V W S+I+G         
Sbjct: 373 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIA-LKDTVVWTSLITGYGIHGKGTK 431

Query: 355 ---LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN--- 407
               F  M+     + +  T L+IL +C+    +  G  I     +L  ++  +  N   
Sbjct: 432 ALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FELMVNDYRLAPNLEH 487

Query: 408 --ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
              L+ +    G+L  A  + +R+  +        ++ AC   QNG   E +
Sbjct: 488 YAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 152/298 (51%), Gaps = 3/298 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L    SLL  Y+    F+ ++ LF     KDV++W+ +I   V+N      L  
Sbjct: 173 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRV 232

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+++G   +  T+L ++ A    N L+QGR  H L+I+ G+  +  +    V+MY K
Sbjct: 233 FNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 292

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSS 179
           C     +   FS +   D VSW  ++SG   N    + +  F  M   +  + D + +  
Sbjct: 293 CFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLK 352

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + + + LG L   +  H+  IK G++ +P++    SL+ +YS+CG +  A + F  +  
Sbjct: 353 VLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGA--SLVELYSRCGSLGNASKVFNEIAL 410

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           KD V W ++I G+ ++GK  +A +  + M     V+P+  T ++++S C+ + L+ EG
Sbjct: 411 KDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEG 468


>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
 gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 309/576 (53%), Gaps = 46/576 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLR 295
           M  +D+VSWNA+I G + NG   +A ++   +QL+R    P   T+V L+  C     + 
Sbjct: 1   MLDRDIVSWNALICGCSRNGYDVDALEIF--VQLLREGFSPLQTTLVGLVPSCGRREFVF 58

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           +GRS+HG+ I+  +  D  + N+L   Y+KS  L  AELLF  +     +VSWN+MI   
Sbjct: 59  QGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELED-KSVVSWNTMIGAY 117

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      +FK M+    + +  T++++LP+  SPE       IHC+ +K G  NN 
Sbjct: 118 AGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPEL------IHCYAIKTGLINNG 171

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             V +L+ +Y  CG    A  L       +  S    +I +  + G+    ++ F  M Q
Sbjct: 172 SVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSL-TAIISSYAEKGNMDLVVECFSRM-Q 229

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRD 521
           Q +   DSV +V+++    +      G +LHG ALK+  GLDT   V N LI+MY +  D
Sbjct: 230 QLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKN--GLDTHNLVSNGLISMYFKFND 287

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           I++A ++F       L +WN +IS   Q      A++ F  ++     P+ I++ S+L+ 
Sbjct: 288 IEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTG 347

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAW 623
           C+QLG LR G+++H ++     +   F+ ++L+DMY+ C S                A W
Sbjct: 348 CSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATW 407

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++MIS Y ++G    A+  + +M   G+ P + + + +L+AC H GL+ EG +++  M E
Sbjct: 408 NTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTE 467

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
           E+ + P  +H  C+V +LGR+G  +EA  FIKN+  +P   VWGA+L+AC  H + K+G+
Sbjct: 468 EFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGE 527

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +A+ L+ L+ +N G Y+ +SN+Y A  RW DA ++
Sbjct: 528 CLAKKLYLLDYKNCGLYVLMSNLYAATNRWNDAAKM 563



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 226/470 (48%), Gaps = 24/470 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++D+V+WNA+I  C  N   V  L  F +++ EG     TTL+ +V +  +   + QGR 
Sbjct: 3   DRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRS 62

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   IK G+  DS + N    MYAK GDL ++E  F  +     VSWNT++     N +
Sbjct: 63  IHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGF 122

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             + +L F+ M     + + V++ S + A+         ++IH   IK G  ++   SV 
Sbjct: 123 FNESMLVFKRMVEQKVEVNPVTIMSLLPANIS------PELIHCYAIKTGLINNG--SVV 174

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            SL+ +Y++CG  E AE  +W    K++VS  AII  +A  G  +   +    MQ +  +
Sbjct: 175 TSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQL-DM 233

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D   +V+++    D   +  G ++HGYA++  L    L+ N L+  Y K N +  A  
Sbjct: 234 KLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAIS 293

Query: 335 LFNAIAPMNDLVSWNSMISGLFK------EMLYLCSQFSFS------TLLAILPSCNSPE 382
           LF  + P   L+SWNS+ISG  +       M + C    F       T+ ++L  C+   
Sbjct: 294 LFYEM-PEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  G+ +H + L+           +L+ MY  CG ++ A  + + I      + WN +I
Sbjct: 353 YLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPC-VATWNTMI 411

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
              +  G    A+  +  M ++Q   PD +T + V++AC +  L  EGK 
Sbjct: 412 SGYSWYGLEHNALNCYSKM-REQGLEPDRITFLGVLAACIHGGLLHEGKK 460



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 198/450 (44%), Gaps = 23/450 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
              +L   Y+     E++  LF E  +K VV+WN MI A   N      +  F  MVE+ 
Sbjct: 78  VKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFNESMLVFKRMVEQK 137

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  +  T++ ++ A           ++HC +IK G+I + S+    V +YAKCG    +E
Sbjct: 138 VEVNPVTIMSLLPANI------SPELIHCYAIKTGLINNGSVVTSLVCLYAKCGSTELAE 191

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             +      + VS   I+S        +  +  F  M     + D+V++ S +       
Sbjct: 192 LLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSVAMVSILHGITDPS 251

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +S G  +H   +K G +    VS  N LISMY +  DIEAA   F+ M  K ++SWN++
Sbjct: 252 HMSIGIALHGYALKNGLDTHNLVS--NGLISMYFKFNDIEAAISLFYEMPEKPLISWNSV 309

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G    G+  +A     +M+ M  + PD  TV +L++ C+    LR G  +H Y +R  
Sbjct: 310 ISGCVQAGRASDAMKFFCQMK-MFGLSPDTITVASLLTGCSQLGYLRLGERLHNYILRNN 368

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------F 356
           L  +  +  SL+D Y+K  S+  AE +F +I     + +WN+MISG             +
Sbjct: 369 LEVEDFVGTSLIDMYTKCGSILLAERVFKSIRE-PCVATWNTMISGYSWYGLEHNALNCY 427

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
            +M     +    T L +L +C     L  GK        + G   N      ++ +   
Sbjct: 428 SKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVPNLQHCACMVGLLGR 487

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G    A   ++ +    D++ W  ++ AC
Sbjct: 488 AGLFEEALLFIKNMESEPDSAVWGALLNAC 517



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 93/193 (48%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H   S  L++ Y   +  E++++LFYE   K +++WN++I+ CV+       + FF
Sbjct: 267 GLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFF 326

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D+ T+  +++  +Q+  L+ G  +H   ++  +  +  +    ++MY KC
Sbjct: 327 CQMKMFGLSPDTITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKC 386

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  F  +      +WNT++SG          L  + +M   G + D ++    +
Sbjct: 387 GSILLAERVFKSIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVL 446

Query: 182 AASACLGELSYGK 194
           AA    G L  GK
Sbjct: 447 AACIHGGLLHEGK 459


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 231/775 (29%), Positives = 380/775 (49%), Gaps = 65/775 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ-MNC-LKQG 92
           +++ VTW  +I+   +N           EM+ EG   +       + A  + M C L+ G
Sbjct: 3   DRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQLG 62

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAK-CGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
             +H L +K+    D+SLCNV ++MY K  G ++ +   F  +   +++ WN+I+S    
Sbjct: 63  MQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQ 122

Query: 152 NNYPEKCLLYFREM-----GWSGEQADNV--SLSSAVAASACLGELSYGKVIHALGIKLG 204
                 C   F  M     G S +  +    SL +A  +S   G    G+++  +  K G
Sbjct: 123 RGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIK-KSG 181

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
              + YV   ++L   +S+ G  + A + F  MT ++ VS N ++ G       EEA ++
Sbjct: 182 LLANLYVG--SALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLL----REGRSVHGYAIRRLLG-YDLLMMNSL 319
             E + +  V+ ++ + V L+S CA+  LL    R+GR VHGYAIR  L    + + N L
Sbjct: 240 FKETRHL--VDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGL 297

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS---------- 369
           ++ Y+K   +  A  +F  +    D VSWNSMI+GL +   +  +  S++          
Sbjct: 298 INMYAKCGDIDHARSVFGLMVD-KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 356

Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV---AAFS 424
             TL++ L SC S   +  G+  H   +KLG   +    N L+ +Y   G L      FS
Sbjct: 357 NFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFS 416

Query: 425 -LLQRISHNSDTSCWNIVIVACTQNG-HFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
            +L+R     D   WN VI A   +G    EAI+ F  M  +   SP+ VT +N+++   
Sbjct: 417 WMLER-----DQVSWNTVIGALADSGASVSEAIEVFLEM-MRAGWSPNRVTFINLLATVS 470

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTWN 541
           +L  +     +H L LK  +  D  ++NAL+  YG+  ++++   +F       +  +WN
Sbjct: 471 SLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN 530

Query: 542 CMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MIS +  N    +A++L   +      +   +  ++LSAC  +  L  G ++H      
Sbjct: 531 SMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRA 590

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
             + +  I SAL+DMYS C               ++  +W+SMIS Y  HG G  A+ LF
Sbjct: 591 CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLF 650

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             M  SG  P   + + +LSACSH GLVDEG +Y+ +M E Y + P  EH+ C+VD+LGR
Sbjct: 651 TRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGR 710

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSAC--SHHGDTKMGKQVAELLFKLEPEN 756
           +G+L +   FI  +PI+P   +W  +L AC   +   T++G++ AE+LF ++P+N
Sbjct: 711 AGELDKIDNFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQN 765



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 222/469 (47%), Gaps = 28/469 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A +     L+  Y+     + + ++F    +KD V+WN+MIT   +N+C    +  +  M
Sbjct: 289 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 348

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
            + G+   + TL+  +S+   + C+  G+  H   IK G+  D S+ N  + +YA+ G L
Sbjct: 349 RKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHL 408

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYP--EKCLLYFREMGWSGEQADNVSLSSAVA 182
              +  FS M   D VSWNT++ G L ++     + +  F EM  +G   + V+  + +A
Sbjct: 409 AECQKVFSWMLERDQVSWNTVI-GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 467

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKD 241
             + L        IHAL +K   +D    ++ N+L++ Y + G++E  E  F  M+  +D
Sbjct: 468 TVSSLSTSKLSHQIHALILKYNVKDDN--AIENALLACYGKSGEMENCEEIFSRMSERRD 525

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN++I G+  N    +A DL+  M + R    D  T  T++S CA    L  G  VH
Sbjct: 526 EVSWNSMISGYIHNDLLCKAMDLVWLM-MQRGQRLDCFTFATVLSACATVATLERGMEVH 584

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--- 358
             AIR  L  D+++ ++L+D YSK   +  A   FN + PM +L SWNSMISG  +    
Sbjct: 585 ACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFN-LMPMRNLYSWNSMISGYARHGYG 643

Query: 359 --MLYLCSQFSFS-------TLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIG 405
              L L ++   S       T + +L +C+      E  E+ KS+       G       
Sbjct: 644 DNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSM---TEVYGLVPRVEH 700

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ-NGHFQE 453
            + ++ +    G+L    + + ++    +   W  V+ AC + NG   E
Sbjct: 701 YSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVLGACCRGNGRKTE 749



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 242/547 (44%), Gaps = 55/547 (10%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--L 294
           M  ++ V+W  +I G+  NG  ++A  +L EM +     P+     + I  C +S+L  L
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEM-IFEGFLPNRFAFGSAIRACQESMLCGL 59

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS-NSLSKAELLFNAIAPMNDLVSWNSMIS 353
           + G  +HG  ++     D  + N L+  Y K    +  A  +F+ I   N  + WNS++S
Sbjct: 60  QLGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNS-IYWNSIVS 118

Query: 354 ------------GLFKEMLYLCS-------QFSFSTLLAILPSCNSPES-LEFGKSIHCW 393
                        LF  M    S       +++F +L  I  +C+S +S L     I   
Sbjct: 119 VYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSL--ITAACSSVDSGLSLLGQILAR 176

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
             K G   N    +AL   +   G    A  + ++++  +  S  N ++V   +    +E
Sbjct: 177 IKKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVS-MNGLMVGLVRQKCGEE 235

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE----GKSLHGLALKS-LMGLDTRV 508
           A++ FK      + + DS  +  ++SAC    L  E    G+ +HG A+++ L      V
Sbjct: 236 AVEVFKETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAV 293

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA---EVRALELFRHLEF 565
            N LI MY +C DI  A +VF    + +  +WN MI+   QNK     V++    R    
Sbjct: 294 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGL 353

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
            P+  +++S LS+C  LG +  G+Q HG    LG   +  +S+ LL +Y+          
Sbjct: 354 MPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQK 413

Query: 618 -------KSNAAWSSMISAYGYHGKGW-EAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                  +   +W+++I A    G    EAIE+F EM  +G  P + + I+LL+  S   
Sbjct: 414 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 473

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
                 Q +  +L +Y+V+ +      ++   G+SG+++   E    +  +     W +M
Sbjct: 474 TSKLSHQIHALIL-KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 532

Query: 730 LSACSHH 736
           +S   H+
Sbjct: 533 ISGYIHN 539


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 201/692 (29%), Positives = 332/692 (47%), Gaps = 51/692 (7%)

Query: 79  IVSALTQMNC---LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           I SAL +      L  G  +H   +K+G++A  S  N  ++ Y++C   +++   F  + 
Sbjct: 7   IGSALARFGASRSLLAGAHLHSHLLKSGLLA--SYSNHLLSFYSRCRLPSAARAVFDEIP 64

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
               VSW+++++   +N  P   L  FR M   G   +  +L   +    C  ++ +G  
Sbjct: 65  DPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK---CAPDVRFGAQ 121

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAIIDGFAL 254
           +HAL +         V VTN+L++MY   G ++ A+R F      ++ VSWN +I  +  
Sbjct: 122 VHALAVATRLIQD--VFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVK 179

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           N +  +A  +  EM +     P+      +++ C  S     GR VHG  +R     D+ 
Sbjct: 180 NDRCRDAVGVFREM-VWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVF 238

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
             N+L+D YSK   +  A ++F  I P  D+VSWN++I+G            L  +M  L
Sbjct: 239 TANALVDMYSKLGDIEMAAVVFEKI-PAADVVSWNALIAGCVTHGHDHRALELLLQMKPL 297

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DL 419
               +  TL ++L +C    +   G+ IH + +K    ++      L+ MY   G   D 
Sbjct: 298 GVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDA 357

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVI 478
              F  + R     D   WN +I  C+ +G   E +  F  M ++  +   +  TL  V+
Sbjct: 358 RKVFDFMPR----RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVL 413

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            +  +LE     K +H LA K  +  D+ V N LI  Y +C  +  A  VFE   + ++ 
Sbjct: 414 KSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDII 473

Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +   M++A SQ      A++LF  +     EP+   + S+L+AC  L     GKQ+H H+
Sbjct: 474 SSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHL 533

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
               F  + F  +AL+  Y+ C               K   +WS+MI     HG G  A+
Sbjct: 534 IKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRAL 593

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           ELFH M + G+ P   ++ S+LSAC+H+GLVD+  +Y+ +M E + +    EH+ C++D+
Sbjct: 594 ELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDI 653

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           LGR+GKL++A E + N+P Q    VWGA+L A
Sbjct: 654 LGRAGKLKDAMELVNNMPFQANAAVWGALLGA 685



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 188/657 (28%), Positives = 313/657 (47%), Gaps = 46/657 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S  LL+ YS      ++ A+F E  +   V+W++++TA   N      L  F  M   G+
Sbjct: 40  SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGV 99

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +   L I++        ++ G  VH L++   +I D  + N  V MY   G ++ ++ 
Sbjct: 100 PCNEYALPIVLKCAPD---VRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKR 156

Query: 130 TFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
            F       + VSWN ++S  + N+     +  FREM WSGE+ +    S  V  +AC G
Sbjct: 157 IFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVV--NACTG 214

Query: 189 ELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              +  G+ +H + ++ GY+   + +  N+L+ MYS+ GDIE A   F  +   DVVSWN
Sbjct: 215 SRDWETGRQVHGMVVRTGYDKDVFTA--NALVDMYSKLGDIEMAAVVFEKIPAADVVSWN 272

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G   +G    A +LL +M+ +  V P++ T+ +++  CA +     GR +HG+ I+
Sbjct: 273 ALIAGCVTHGHDHRALELLLQMKPL-GVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIK 331

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                D  +   L+D Y+K   L  A  +F+   P  DL+ WN++ISG            
Sbjct: 332 ADADSDEFVAVGLVDMYAKDGFLDDARKVFD-FMPRRDLILWNALISGCSHDGRHGEVLS 390

Query: 355 LFKEMLY--LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           LF  M    L    + +TL A+L S  S E++   K +H    K+G  +++  VN L+  
Sbjct: 391 LFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDS 450

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A  + +  S + D      ++ A +Q  H ++AIK F  M  ++   PDS 
Sbjct: 451 YWKCGRLDYAIKVFEE-SCSDDIISSTSMMTALSQCDHGEDAIKLFVQML-RKGLEPDSF 508

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            L ++++AC +L    +GK +H   +K     D    NAL+  Y +C  I+ A   F   
Sbjct: 509 VLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGL 568

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
               + +W+ MI   +Q+    RALELF  +  E   PN I++ S+LSAC   G++   K
Sbjct: 569 PEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAK 628

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           +                  ++ + +   ++   ++ MI   G  GK  +A+EL + M
Sbjct: 629 KYF---------------ESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNM 670



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 266/563 (47%), Gaps = 31/563 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
            + +L+  Y      + +  +F E    ++ V+WN MI+A V+N      +  F EMV  
Sbjct: 137 VTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWS 196

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G R +      +V+A T     + GR VH + ++ G   D    N  V+MY+K GD+  +
Sbjct: 197 GERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMA 256

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +  AD VSWN +++GC+ + +  + L    +M   G   +  +LSS + A A  
Sbjct: 257 AVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGA 316

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G  + G+ IH   IK   +   +V+V   L+ MY++ G ++ A + F  M  +D++ WNA
Sbjct: 317 GAFNLGRQIHGFMIKADADSDEFVAV--GLVDMYAKDGFLDDARKVFDFMPRRDLILWNA 374

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDI--ATVVTLISLCADSLLLREGRSVHGYAI 305
           +I G + +G+  E   L H M+    ++ D+   T+  ++   A    +   + VH  A 
Sbjct: 375 LISGCSHDGRHGEVLSLFHRMR-KEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAE 433

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +  L  D  ++N L+D Y K   L  A  +F   +  +D++S  SM++            
Sbjct: 434 KIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEE-SCSDDIISSTSMMTALSQCDHGEDAI 492

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF +ML    +     L ++L +C S  + E GK +H   +K  F+++    NAL++ Y
Sbjct: 493 KLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTY 552

Query: 414 INCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             CG   D   AFS L           W+ +I    Q+GH + A++ F  M   +  +P+
Sbjct: 553 AKCGSIEDADMAFSGLP----EKGVVSWSAMIGGLAQHGHGKRALELFHRML-DEGVAPN 607

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTV 528
           ++TL +V+SAC +  L  + K  +  ++K   G+D   ++   +I + GR   +K A  +
Sbjct: 608 NITLTSVLSACNHAGLVDDAKK-YFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMEL 666

Query: 529 FESC-YNCNLCTWNCMISAFSQN 550
             +  +  N   W  ++ A   N
Sbjct: 667 VNNMPFQANAAVWGALLGASRLN 689



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 198/420 (47%), Gaps = 31/420 (7%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T+ + L    +  SL  G  +H   LK G   +    N L+  Y  C    AA ++   I
Sbjct: 6   TIGSALARFGASRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEI 63

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
                 S W+ ++ A + NG  ++A+  F+SM  +    P +   + ++  C   ++ F 
Sbjct: 64  PDPCHVS-WSSLVTAYSNNGMPRDALWAFRSM--RGRGVPCNEYALPIVLKCAP-DVRF- 118

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFS 548
           G  +H LA+ + +  D  V NAL+ MYG    +  A  +F E     N  +WN MISA+ 
Sbjct: 119 GAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYV 178

Query: 549 QNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           +N     A+ +FR + +    PNE     +++ACT       G+Q+HG V   G+ ++ F
Sbjct: 179 KNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVF 238

Query: 606 ISSALLDMYSNC-----------KSNAA----WSSMISAYGYHGKGWEAIELFHEMCNSG 650
            ++AL+DMYS             K  AA    W+++I+    HG    A+EL  +M   G
Sbjct: 239 TANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLG 298

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           + P   ++ S+L AC+ +G  + G Q +  M++  D   +    V +VDM  + G L +A
Sbjct: 299 VVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKA-DADSDEFVAVGLVDMYAKDGFLDDA 357

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
            +    +P +    +W A++S CSH  D + G +V  L  ++  E +   ++ + +   L
Sbjct: 358 RKVFDFMPRRDLI-LWNALISGCSH--DGRHG-EVLSLFHRMRKEGLDLDVNRTTLAAVL 413



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 119/506 (23%), Positives = 217/506 (42%), Gaps = 78/506 (15%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL--------- 362
           N L+ FYS+    S A  +F+ I P    VSW+S+++     G+ ++ L+          
Sbjct: 41  NHLLSFYSRCRLPSAARAVFDEI-PDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGV 99

Query: 363 -CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
            C++++   +L   P       + FG  +H   +      +    NAL+ MY   G +  
Sbjct: 100 PCNEYALPIVLKCAPD------VRFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDE 153

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +        +   WN +I A  +N   ++A+  F+ M       P+      V++AC
Sbjct: 154 AKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWS-GERPNEFGFSCVVNAC 212

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                   G+ +HG+ +++    D    NAL+ MY +  DI+ A+ VFE     ++ +WN
Sbjct: 213 TGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWN 272

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +I+    +  + RALEL    + L   PN  ++ S+L AC   G    G+QIHG +   
Sbjct: 273 ALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKA 332

Query: 599 GFQENSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELF 643
               + F++  L+DMY+                 +    W+++IS   + G+  E + LF
Sbjct: 333 DADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLF 392

Query: 644 HEMCNSGI-----RPTKSSVI---SLLSACSHS----------GLVDEGLQYYNNMLEEY 685
           H M   G+     R T ++V+   + L A  H+          GL+ +     N +++ Y
Sbjct: 393 HRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDS-HVVNGLIDSY 451

Query: 686 ------DVRPETEHHVCIVDMLGRSGKL---------QEAYE-FIKNLP--IQPKPGVWG 727
                 D   +     C  D++  +  +         ++A + F++ L   ++P   V  
Sbjct: 452 WKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLS 511

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLE 753
           ++L+AC+     + GKQV   L K +
Sbjct: 512 SLLNACASLSAYEQGKQVHAHLIKRQ 537



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 92/182 (50%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+       L+ +Y      + ++ +F E+C+ D+++  +M+TA  +       +  F
Sbjct: 436 GLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLF 495

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ +G+  DS  L  +++A   ++  +QG+ VH   IK    +D    N  V  YAKC
Sbjct: 496 VQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKC 555

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  ++  FSG+     VSW+ ++ G   + + ++ L  F  M   G   +N++L+S +
Sbjct: 556 GSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVL 615

Query: 182 AA 183
           +A
Sbjct: 616 SA 617


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 296/598 (49%), Gaps = 38/598 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSW-NAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           + L  +Y  CG   +A      M     VS+ N+++  +   G   EA  +   M+    
Sbjct: 49  HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF-- 106

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
              D  T       CA   L R GR+VH  A+    G D  + N+L+  Y     +  AE
Sbjct: 107 ---DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F A+     +VSWN++I+G            +F EM         +T++++LP+C   
Sbjct: 164 AVFGAMRN-RTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQA 222

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           + L  G+++H      G  +     NAL+ MY  C  L  A  +     H+ D   W  +
Sbjct: 223 KDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAM 282

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I A   N    EAI     M     A P+ VT+V ++SAC ++      K  H L ++  
Sbjct: 283 IGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  V+ ALI  Y RC  +K      E   +    TWN  +S ++ +  E +A+ELF+
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERG-SWRAETWNAALSGYTVSGREKKAIELFK 401

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            +  E   P+  ++ SIL A  +   L+ GK IH  +  LGF  ++ I++ L+D+YS   
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAG 461

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K   AW+++I+ YG HG    AI L+  M  SG +P   ++ +LL 
Sbjct: 462 DLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLY 521

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+G++DEG++ + +M   + + P  EH+ C+VDMLGR+G+++EA+  I+++P +P  
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPST 581

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VWGA+L AC  H + + G+  A+ LF+L+PEN G Y+ L N+Y A  RW+D  ++ +
Sbjct: 582 SVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRR 639



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 251/534 (47%), Gaps = 42/534 (7%)

Query: 56  MGLHFFGEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
           +G H     V   +R FD  T      A   +   + GR VHC ++ AG   D+ + N  
Sbjct: 90  LGCHREALAVYSAMRAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNAL 149

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MY  CGD+ ++E  F  M     VSWN +++GC+ N Y E+ L  F EM   G   D 
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            ++ S + A A   +L+ G+ +H L    G  D  YV+V N+LI MY +C  +E A R F
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGD--YVAVKNALIDMYGKCRSLEDARRVF 267

Query: 235 WGMTC---KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
               C   KDVVSW A+I  + LN +  EA  L  +M +  +  P+  T+V L+S CA  
Sbjct: 268 --DHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASM 325

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              +  +  H   IR  L  D+ +  +L+D Y++   +    L     +   +  +WN+ 
Sbjct: 326 PSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE--TWNAA 383

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           +SG            LFK M+    +   +T+ +ILP+      L+ GK+IHC+ L LGF
Sbjct: 384 LSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGF 443

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +T     L+ +Y   GDL AA++L Q +    D   W  +I     +GH + AI  + 
Sbjct: 444 LRSTEIATGLIDVYSKAGDLDAAWALFQWLPEK-DVVAWTTIIAGYGIHGHARTAILLYD 502

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEG-------KSLHGLALKSLMGLDTRVQNAL 512
            M  +    P++VT+  ++ AC +  +  EG       +++HGL        +    + L
Sbjct: 503 RMV-ESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLM------PNGEHYSCL 555

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFR 561
           + M GR   I+ A  + +   +  +   W  ++ A   +K     EV A  LF+
Sbjct: 556 VDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQ 609



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 44/509 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L++ Y +     ++ A+F    N+ VV+WNA+I  CV+N      L  F
Sbjct: 138 GFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVF 197

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           GEM  +G+  D  T++ ++ A  Q   L  GR VH L    G+    ++ N  ++MY KC
Sbjct: 198 GEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKC 257

Query: 122 GDLNSSECTFSGMHC---ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSL 177
             L  +   F   HC    D VSW  ++   + N+   + +    +M  SG    N V++
Sbjct: 258 RSLEDARRVFD--HCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE----AAERA 233
              ++A A +    + K  HAL I+LG +    ++V  +LI  Y++CG ++      ER 
Sbjct: 316 VYLLSACASMPSGKHAKCTHALCIRLGLKSD--IAVETALIDAYARCGKMKLMRLTLERG 373

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
            W        +WNA + G+ ++G+ ++A +L   M +  SV PD AT+ +++   A+S  
Sbjct: 374 SW-----RAETWNAALSGYTVSGREKKAIELFKRM-IAESVRPDSATMASILPAYAESAD 427

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L+EG+++H + +         +   L+D YSK+  L  A  LF  + P  D+V+W ++I+
Sbjct: 428 LKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWL-PEKDVVAWTTIIA 486

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQ 394
           G            L+  M+    + +  T+  +L +C+    ++ G       +++H   
Sbjct: 487 GYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVH--- 543

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
              G   N    + L+ M    G +  A  L+Q +     TS W  ++ AC  + + +  
Sbjct: 544 ---GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFG 600

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGN 483
               K + Q    +  S  L+  I A  +
Sbjct: 601 EVAAKRLFQLDPENTGSYVLLGNIYAAAD 629



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 178/402 (44%), Gaps = 61/402 (15%)

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G++ L  +Y  CG   +A +LL ++      S  N ++ + T  G  +EA+  + +M   
Sbjct: 47  GLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR-- 104

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
              + D +T      AC  L L   G+++H  AL +  G DT VQNALI+MY  C D+ +
Sbjct: 105 ---AFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGA 161

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQ 581
           A  VF +  N  + +WN +I+   +N    RALE+F  +  +    +  ++VS+L AC Q
Sbjct: 162 AEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQ 221

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS----------------NAAWSS 625
              L  G+ +H  V   G  +   + +AL+DMY  C+S                  +W++
Sbjct: 222 AKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTA 281

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIR-PTKSSVISLLSACS------------------ 666
           MI AY  + + +EAI L  +M  SG   P   +++ LLSAC+                  
Sbjct: 282 MIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRL 341

Query: 667 --------HSGLVDE-----GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
                    + L+D       ++     LE    R ET +    +     SG+ ++A E 
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETWN--AALSGYTVSGREKKAIEL 399

Query: 714 IKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
            K +    ++P      ++L A +   D K GK +   L  L
Sbjct: 400 FKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTL 441


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 187/589 (31%), Positives = 308/589 (52%), Gaps = 36/589 (6%)

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
           CGD+  A   F  +    +  +NA+I  ++L G    A  L   ++  R  +P+  T   
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGP-ALALRLYRSLRRRRLPQPNNYTFPF 134

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           ++  C+  L LR  R+VH +A R  L  DL +  +L+D Y+K  S   A  +F  + P  
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM-PAR 193

Query: 344 DLVSWNSMISGLFKEMLY-------LCSQFSF----STLLAILPSCNSPESLEFGKSIHC 392
           D+V+WN+M++G      Y       L  Q       STL+A+LP      +L  G+++H 
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 393 WQLKL-GFSNNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           + ++     ++  GV    AL+ MY  CG LV A  + + ++  ++ + W+ ++      
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT-WSALVGGFVLC 312

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G   EA   FK M  Q        ++ + + AC NL     GK LH L  KS +  D   
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
            N+L++MY +   I  A+T+F+     +  +++ ++S + QN     A  +FR ++    
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           +P+  ++VS++ AC+ L  L+HGK  HG V   G    + I +AL+DMY+ C        
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  +   +W++MI+ YG HG G EA  LF +M +    P   + I L+SACSHSGL
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V EG ++++ M  +Y + P  EH++ +VD+L R G L EAY+FI+ +P++    VWGA+L
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AC  H +  +GKQV+ ++ +L PE  G ++ LSN++ A GR+ +A E+
Sbjct: 613 GACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEV 661



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 249/523 (47%), Gaps = 56/523 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A L  ST+L+  Y+  + F  +  +F     +DVV WNAM+           G    
Sbjct: 159 GLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLA----------GYALH 208

Query: 62  GE---------MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS--- 109
           G+         ++++    +++TL+ ++  L Q   L QGR VH  S++A  + D     
Sbjct: 209 GKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGV 268

Query: 110 -LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS 168
            +    ++MYAKCG L  +   F  M   + V+W+ ++ G +      +    F++M   
Sbjct: 269 LVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQ 328

Query: 169 GE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
           G       S++SA+ A A L +L  GK +HAL  K G      ++  NSL+SMY++ G I
Sbjct: 329 GLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTD--LTAGNSLLSMYAKAGLI 386

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           + A   F  M  KD VS++A++ G+  NGK +EAF +  +MQ   +V+PD+AT+V+LI  
Sbjct: 387 DQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC-NVQPDVATMVSLIPA 445

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           C+    L+ G+  HG  I R +  +  + N+L+D Y+K   +  +  +F+ + P  D+VS
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD-VMPARDIVS 504

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN+MI+G            LF +M +   +    T + ++ +C+    +  GK    W  
Sbjct: 505 WNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKR---W-- 559

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQN 448
                 +  G+   M  YI   DL+A       A+  +Q +   +D   W  ++ AC  +
Sbjct: 560 -FHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVH 618

Query: 449 GHFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
            +     K   SM QQ     + + V L N+ SA G  + A E
Sbjct: 619 KNIDLG-KQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAE 660



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 229/457 (50%), Gaps = 33/457 (7%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T   ++ A + +  L+  R VHC + +AG+ AD  +    V++YAKC     +   F  M
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190

Query: 135 HCADTVSWNTIMSG-CLHNNYPEK--CLLYFREMGWSGEQADNVS-LSSAVAASACLGEL 190
              D V+WN +++G  LH  Y +   CLL  ++     + A N S L + +   A  G L
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-----DHAPNASTLVALLPLLAQHGAL 245

Query: 191 SYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           S G+ +HA  ++    ++    V V  +L+ MY++CG +  A R F  M  ++ V+W+A+
Sbjct: 246 SQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSAL 305

Query: 249 IDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           + GF L G+  EAF L  +M  Q +  + P   +V + +  CA+   L  G+ +H    +
Sbjct: 306 VGGFVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAK 363

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
             L  DL   NSL+  Y+K+  + +A  LF+ +  + D VS+++++SG            
Sbjct: 364 SGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV-VKDTVSYSALVSGYVQNGKADEAFR 422

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +F++M     Q   +T+++++P+C+   +L+ GK  H   +  G ++ T   NAL+ MY 
Sbjct: 423 VFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYA 482

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG +  +  +   +    D   WN +I     +G  +EA   F  M + Q   PD VT 
Sbjct: 483 KCGRIDLSRQIFD-VMPARDIVSWNTMIAGYGIHGLGKEATALFLDM-KHQACEPDDVTF 540

Query: 475 VNVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQN 510
           + +ISAC +  L  EGK   H +A K   G+  R+++
Sbjct: 541 ICLISACSHSGLVTEGKRWFHMMAHK--YGITPRMEH 575



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 12/225 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +      +L+  Y+     + S  +F     +D+V+WN MI     +         
Sbjct: 465 RGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATAL 524

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M  +    D  T + ++SA +    + +G R  H ++ K G+          V++ A
Sbjct: 525 FLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLA 584

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNYP--EKCLLYFREMGWSGEQADNV 175
           + G L+ +     GM   AD   W  ++  C +H N    ++     +++G  G   + V
Sbjct: 585 RGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGT-GNFV 643

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSP---YVSVTNSL 217
            LS+  +A+    E +  ++I     + G++ SP   ++ +  SL
Sbjct: 644 LLSNIFSAAGRFDEAAEVRIIQK---EQGFKKSPGCSWIEINGSL 685


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 215/705 (30%), Positives = 348/705 (49%), Gaps = 65/705 (9%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLG 188
           F  +    TV WNTI+ G + NN P + LL++  M  +    + D  + SS + A A   
Sbjct: 62  FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETK 121

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE----------RAFWGMT 238
            L  GK +H   I+   ++S  V V NSL++MY  C +   +E          + F  M 
Sbjct: 122 NLKAGKAVHCHLIRC-LQNSSRV-VHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMR 179

Query: 239 CKDVVSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            K+VV+WN +I  +   G+  EA   F ++  M+    ++P   + V +    A S  ++
Sbjct: 180 RKNVVAWNTLISWYVKTGRNAEACRQFAIMMRME----IKPSPVSFVNVFPAVATSRSIK 235

Query: 296 EGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           +    +G  ++    Y  DL +++S +  Y++   L  +  +F++    N  V WN+MI 
Sbjct: 236 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEV-WNTMI- 293

Query: 354 GLFKEMLYLCSQFSF--------------STLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           G++ +   L                     T L    + +  + +E G+  H +  K   
Sbjct: 294 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFR 353

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
               + +N+LM MY  CG +  +F +   +    D   WN +I A  QNG   E +    
Sbjct: 354 ELPIVIINSLMVMYSRCGFVQKSFGVFHSM-RERDVVSWNTMISAFVQNGLDDEGLMLVY 412

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M Q+Q    D +T+  ++SA  NL     GK  HG  ++  +  +  + + LI MY + 
Sbjct: 413 EM-QKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG-MNSYLIDMYAKS 470

Query: 520 RDIKSASTVFE-SCY-NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVS 574
             I+ +  +FE S Y   +  TWN MIS ++QN        +FR +      PN +++ S
Sbjct: 471 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVAS 530

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           IL AC+Q+G +  GKQ+HG        +N F++SAL+DMYS                 ++
Sbjct: 531 ILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERN 590

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
           +  +++MI  YG HG G  AI LF  M   GI+P   + +++LSACS+SGLVDEGL+ + 
Sbjct: 591 SVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFE 650

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGD 738
           +M E Y+++P +EH+ CI DMLGR G++ EAYEF+K L  +     +WG++L +C  HG+
Sbjct: 651 DMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGE 710

Query: 739 TKMGKQVAELLFKLEPEN--VGYYISLSNMYVALGRWKDAVEIGK 781
            ++ + V+E L KL+      GY + LSNMY     WK    + K
Sbjct: 711 LELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRK 755



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 272/592 (45%), Gaps = 33/592 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--IRFDSTTLLIIVSALTQM 86
           LF        V WN +I   + N      L F+  M +     + D+ T    + A  + 
Sbjct: 61  LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAET 120

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC----------TFSGMHC 136
             LK G+ VHC  I+    +   + N  +NMY  C +   SE            F  M  
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRR 180

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            + V+WNT++S  +      +    F  M     +   VS  +   A A    +    V 
Sbjct: 181 KNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVF 240

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           + L +KLG E    + V +S ISMY++ GD+E++ R F     +++  WN +I  +  N 
Sbjct: 241 YGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQND 300

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
              E+ +L  E    + +  D  T +   S  +    +  GR  HG+  +      ++++
Sbjct: 301 CLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVII 360

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ------ 365
           NSLM  YS+   + K+  +F+++    D+VSWN+MIS     GL  E L L  +      
Sbjct: 361 NSLMVMYSRCGFVQKSFGVFHSMRE-RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 419

Query: 366 -FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCGDLVAAF 423
              + T+ A+L + ++  + E GK  H + ++ G      G+N+ L+ MY   G +  + 
Sbjct: 420 KIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE--GMNSYLIDMYAKSGLIRISQ 477

Query: 424 SLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
            L +   +   D + WN +I   TQNGH +E    F+ M  +QN  P++VT+ +++ AC 
Sbjct: 478 KLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKML-EQNIRPNAVTVASILPACS 536

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            +     GK LHG +++  +  +  V +AL+ MY +   IK A  +F      N  T+  
Sbjct: 537 QVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTT 596

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
           MI  + Q+    RA+ LF   + L  +P+ I+ V++LSAC+  G++  G +I
Sbjct: 597 MILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 169/660 (25%), Positives = 281/660 (42%), Gaps = 95/660 (14%)

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +P      S +S   Q G+ + A + F  +     V WN II GF  N    EA      
Sbjct: 36  TPQTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSR 95

Query: 268 MQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           M+        D  T  + +  CA++  L+ G++VH + IR L     ++ NSLM+ Y   
Sbjct: 96  MKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC 155

Query: 327 NSLSKAEL----------LFNAIAPMNDLVSWNSMISGLFK--EMLYLCSQFSF------ 368
            +   +EL          +F+ +   N +V+WN++IS   K       C QF+       
Sbjct: 156 LNAPGSELDCFEYDVVRKVFDNMRRKN-VVAWNTLISWYVKTGRNAEACRQFAIMMRMEI 214

Query: 369 ----STLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDLVAA 422
                + + + P+  +  S++     +   LKLG  +  +   V++ + MY   GDL ++
Sbjct: 215 KPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESS 274

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +        +   WN +I    QN    E+I+ F      +    D VT +   SA  
Sbjct: 275 RRVFDSCVER-NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVS 333

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L+    G+  HG   K+   L   + N+L+ MY RC  ++ +  VF S    ++ +WN 
Sbjct: 334 GLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNT 393

Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           MISAF QN  +   L L   ++   F+ + I++ ++LSA + L     GKQ HG +   G
Sbjct: 394 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQG 453

Query: 600 FQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            Q    ++S L+DMY+                   +  A W+SMIS Y  +G   E   +
Sbjct: 454 IQFEG-MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLV 512

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV----CIV 698
           F +M    IRP   +V S+L ACS  G VD G Q     L  + +R   + +V     +V
Sbjct: 513 FRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQ-----LHGFSIRQYLDQNVFVASALV 567

Query: 699 DMLGRSGKLQEAYEF----------------------------------IKNLPIQPKPG 724
           DM  ++G ++ A                                     ++ L I+P   
Sbjct: 568 DMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAI 627

Query: 725 VWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            + A+LSACS+ G    G ++ E +   + ++P +  +Y  +++M   +GR  +A E  K
Sbjct: 628 AFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSS-EHYCCITDMLGRVGRVNEAYEFVK 686



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/493 (23%), Positives = 226/493 (45%), Gaps = 66/493 (13%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           ++  L   +S ++ Y+ +   ESS  +F     +++  WN MI   V+N C+V  +  F 
Sbjct: 251 YVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 310

Query: 63  EMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           E +  + I  D  T L+  SA++ +  ++ GR  H    K        + N  + MY++C
Sbjct: 311 EAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRC 370

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  S   F  M   D VSWNT++S  + N   ++ L+   EM   G + D +++++ +
Sbjct: 371 GFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 430

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTC 239
           +A++ L     GK  H   I+ G +   +  + + LI MY++ G I  +++ F   G   
Sbjct: 431 SAASNLRNKEIGKQTHGFLIRQGIQ---FEGMNSYLIDMYAKSGLIRISQKLFEGSGYAE 487

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D  +WN++I G+  NG  EE F +  +M L +++ P+  TV +++  C+    +  G+ 
Sbjct: 488 RDQATWNSMISGYTQNGHTEETFLVFRKM-LEQNIRPNAVTVASILPACSQVGSVDLGKQ 546

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +HG++IR+ L  ++ + ++L+D YSK+ ++  AE +F+     N  V++ +MI       
Sbjct: 547 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNS-VTYTTMI------- 598

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                                                LG+  + +G  A           
Sbjct: 599 -------------------------------------LGYGQHGMGERA----------- 610

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTLVN 476
           ++ F  +Q +    D   +  V+ AC+ +G   E +K F+ M +  N  P S     + +
Sbjct: 611 ISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITD 670

Query: 477 VISACGNLELAFE 489
           ++   G +  A+E
Sbjct: 671 MLGRVGRVNEAYE 683


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 226/789 (28%), Positives = 379/789 (48%), Gaps = 50/789 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG----IRFD 72
           Y N    + +  LF E   + +V+W  +++    +      L  F +M+       +R D
Sbjct: 2   YVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRPD 61

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           S    +++ A   + CL  GR VH L +K   + DS + N  V+MY  CG L  +   F 
Sbjct: 62  SFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFG 121

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
           G+   D V W++I+SG + N   E+ L  F +M   G + D  + S  + A   L    +
Sbjct: 122 GIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDF 181

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G   H   IK+G++   Y+   NSL+  Y++CGD+E   R F  M+ K++VSWN  I+G+
Sbjct: 182 GTQAHCYIIKMGFDSCLYLE--NSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGY 239

Query: 253 ALNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
             N  + EA  +     LM  V + D  ++++++   +    L  G+ +HGY +R  +  
Sbjct: 240 VHNFHYLEALRIFQ--ILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIET 297

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
           +  +++SL+D Y     +    L      P+  L   N +  G + E +          +
Sbjct: 298 NRYVVSSLLDMY--IGCIDHESLYPRVEVPLKLL---NYLEGGGYDEFI----------M 342

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            ++L  C+   SLE GK  H   +KL   +++  +++L+ MY  CG   AA  +  R+  
Sbjct: 343 TSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQ 402

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             DT+ W+ +I   + NG F EA+K F+ M Q      +  T  +VI AC  LE   +GK
Sbjct: 403 -PDTAPWSALISGHSWNGCFAEALKLFRKM-QFDGIKANEFTFTSVILACLALENLRKGK 460

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA-FSQN 550
            LH   L+S    +  V N LI +Y      K A  +     +  + +WN +I A     
Sbjct: 461 ELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEI-SWNFLIRACLGAE 519

Query: 551 KAEVRALELFR----HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
             E+    L+R    H   +P  +S   I ++C+   +L  G Q H ++   G   +  I
Sbjct: 520 DYEIIHKLLWRIQVSHGNLDP--VSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTI 577

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           S++L+ MYS C               K   +W+S++SA   HG   EA+ L  +M     
Sbjct: 578 SNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNK 637

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
              +S+  S+L+AC+  GLVDE  + + +M E Y + P  EH+ C+V++LGR+G  +E  
Sbjct: 638 PADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEEVL 697

Query: 712 EFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           +FI  +P  +  P +W  +LS+   HG+ K+ +  AE L +LEP +    + L  + + L
Sbjct: 698 DFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVLLTL 757

Query: 771 GRWKDAVEI 779
           G W +A+++
Sbjct: 758 GEWDNALKL 766



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 189/709 (26%), Positives = 312/709 (44%), Gaps = 92/709 (12%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADN 174
           MY   G +  +   F  M     VSW  +MSG   +    + L+ F +M  G  G     
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 175 VSLSSAVAASAC--LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            S   AV   AC  +  LSYG+ +H L +K       +V   N+L+SMY  CG +E A  
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVE--NALVSMYGSCGALEDAAV 118

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F G+   D+V W++I+ G+  NG  EE   +  +M +   +EPD      ++  C +  
Sbjct: 119 VFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDM-VSGGIEPDAFAFSMVLGACTNLE 177

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
               G   H Y I+  +G+D  L + NSLMDFY+K   L     +F+ ++  N LVSWN+
Sbjct: 178 CWDFGTQAHCYIIK--MGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKN-LVSWNT 234

Query: 351 MISGLFKEMLYL---------------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
            I+G      YL               C  FS   LL+IL + +    L+ GK IH + L
Sbjct: 235 FINGYVHNFHYLEALRIFQILMEEVSQCDDFS---LLSILKAVSGLGHLDHGKEIHGYIL 291

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           + G   N   V++L+ MYI C D     SL  R+                          
Sbjct: 292 RAGIETNRYVVSSLLDMYIGCID---HESLYPRVE------------------------- 323

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALIT 514
              K +   +    D   + +++  C +LE + E GK  H L +K  +  D+ V ++LI 
Sbjct: 324 VPLKLLNYLEGGGYDEFIMTSLLKWC-SLESSLESGKMFHSLIIKLDLKSDSYVLSSLID 382

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           MY +C   ++A  VF      +   W+ +IS  S N     AL+LFR ++F+    NE +
Sbjct: 383 MYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFT 442

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
             S++ AC  L  LR GK++H  +   G++ N  + + L+++YS                
Sbjct: 443 FTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIP 502

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEM------CNSGIRPTKSSVISLLSACSHSGLV 671
            S  +W+ +I A      G E  E+ H++       +  + P   S   + ++CS   L+
Sbjct: 503 DSEISWNFLIRA----CLGAEDYEIIHKLLWRIQVSHGNLDPV--SACDIFASCSSPVLL 556

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           + G Q +  M +   +   T  +  ++ M    GK  EA +    +P +     W ++LS
Sbjct: 557 NVGTQAHAYMTKRGLISHPTISN-SLIQMYSACGKFDEAVQAFNLMP-EKDTCSWTSILS 614

Query: 732 ACSHHG-DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           A   HG  ++    ++++ +K +P +   + S+ N    +G   +A  +
Sbjct: 615 ARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRL 663



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 265/592 (44%), Gaps = 48/592 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
              +L++ Y +    E +  +F      D+V W+++++  V+N     GL  F +MV  G
Sbjct: 99  VENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG 158

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  D+    +++ A T + C   G   HC  IK G  +   L N  ++ YAKCGDL    
Sbjct: 159 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 218

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             FS M   + VSWNT ++G +HN +  + L  F+ +     Q D+ SL S + A + LG
Sbjct: 219 RVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLG 278

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L +GK IH   ++ G E + Y  V +SL+ MY  C                        
Sbjct: 279 HLDHGKEIHGYILRAGIETNRY--VVSSLLDMYIGC------------------------ 312

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           ID  +L  + E    LL+ ++       D   + +L+  C+    L  G+  H   I+  
Sbjct: 313 IDHESLYPRVEVPLKLLNYLE---GGGYDEFIMTSLLKWCSLESSLESGKMFHSLIIKLD 369

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLC 363
           L  D  +++SL+D YSK      A+ +F  +    D   W+++IS     G F E L L 
Sbjct: 370 LKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVE-QPDTAPWSALISGHSWNGCFAEALKLF 428

Query: 364 SQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +  F        T  +++ +C + E+L  GK +HC  L+ G+ +N   VN L+++Y   
Sbjct: 429 RKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSEL 488

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
                A  L   I  +S+ S WN +I AC     + E I       Q  + + D V+  +
Sbjct: 489 WQHKQALKLCSMIP-DSEIS-WNFLIRACLGAEDY-EIIHKLLWRIQVSHGNLDPVSACD 545

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           + ++C +  L   G   H    K  +     + N+LI MY  C     A   F      +
Sbjct: 546 IFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKD 605

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
            C+W  ++SA  ++     AL L   + ++    ++ +  S+L+AC Q+G++
Sbjct: 606 TCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLV 657



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 241/535 (45%), Gaps = 56/535 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    SL+  Y+     E    +F     K++V+WN  I   V N   +  L  F
Sbjct: 193 GFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIF 252

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             ++EE  + D  +LL I+ A++ +  L  G+ +H   ++AG+  +  + +  ++MY  C
Sbjct: 253 QILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGC 312

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D    E  +  +                    P K L Y    G+     D   ++S +
Sbjct: 313 ID---HESLYPRVEV------------------PLKLLNYLEGGGY-----DEFIMTSLL 346

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
              +    L  GK+ H+L IKL  +   Y  V +SLI MYS+CG  EAA+R F  +   D
Sbjct: 347 KWCSLESSLESGKMFHSLIIKLDLKSDSY--VLSSLIDMYSKCGIWEAAKRVFTRVEQPD 404

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
              W+A+I G + NG F EA  L  +MQ    ++ +  T  ++I  C     LR+G+ +H
Sbjct: 405 TAPWSALISGHSWNGCFAEALKLFRKMQF-DGIKANEFTFTSVILACLALENLRKGKELH 463

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              +R     +  ++N+L++ YS+     +A  L + I   +  +SWN +I         
Sbjct: 464 CKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIP--DSEISWNFLIRACLGAEDY 521

Query: 355 -LFKEMLYLCSQFSFSTLLA-----ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            +  ++L+   Q S   L       I  SC+SP  L  G   H +  K G  ++    N+
Sbjct: 522 EIIHKLLWRI-QVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNS 580

Query: 409 LMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L+ MY  CG   + V AF+L+       DT  W  ++ A  ++GH  EA+     M + +
Sbjct: 581 LIQMYSACGKFDEAVQAFNLMPE----KDTCSWTSILSARVEHGHPSEALNLISQM-RWK 635

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGR 518
           N   D  T  +V++AC  + L  E   L   ++K + G++   ++   ++ + GR
Sbjct: 636 NKPADQSTFRSVLNACAQMGLVDEAFRLF-FSMKEVYGIEPLEEHYSCMVEVLGR 689



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 44/92 (47%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG ++H   S SL+  YS    F+ ++  F     KD  +W ++++A VE+      L+ 
Sbjct: 569 RGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNL 628

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG 92
             +M  +    D +T   +++A  QM  + + 
Sbjct: 629 ISQMRWKNKPADQSTFRSVLNACAQMGLVDEA 660


>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
 gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 196/668 (29%), Positives = 328/668 (49%), Gaps = 95/668 (14%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           HAL I  G  ++ ++S  + LIS+Y+      ++   F     KD   WN+II     NG
Sbjct: 52  HALIITTGNANNVFIS--SKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNG 109

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLM 315
            + +AFD   +M+   +  P+  T+  +++ CA+ L L EG+ +HG   +  L   +  +
Sbjct: 110 NYFKAFDFYIQMRY-DNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAV 168

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------KEMLYLCS----- 364
            +S +  Y+K   +  A L+F+ I  + D+VSW +++ G        K +  LC      
Sbjct: 169 GSSFVYMYAKCGVMEDASLMFDEIV-VRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIG 227

Query: 365 ----QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               + +  TL     +C +  ++  G+ +H   +K G   + +  ++L+ MY  CG++ 
Sbjct: 228 GDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVE 287

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A +   ++  + D   W  VI  C + G   E +  F  M Q  +  PD + +  ++  
Sbjct: 288 EAHNSFCQVV-DKDVFSWTSVIGVCARFGFMNECLNLFWDM-QVDDVYPDGIVVSCILLG 345

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES--------- 531
            GN  +  EGK+ HGL ++    LD  V NAL++MY +   +  A  +F+          
Sbjct: 346 FGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESW 405

Query: 532 ---------CY------------------------------------NCNLCTWNCMISA 546
                    CY                                      ++ TWN +IS+
Sbjct: 406 NTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISS 465

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           ++ +     A+ LF  +   +  PN  ++V +LSAC  L  L  GK +H ++   GF+ N
Sbjct: 466 YTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELN 525

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + +AL+DMY+ C               K   +W+ MIS YG HG    A+E+F +M  
Sbjct: 526 VSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQ 585

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           S ++P   + +SLLSAC+H+G VDEG Q ++ M + Y ++P  +H  C+ D+LGRSG LQ
Sbjct: 586 SNVKPNAITFLSLLSACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQ 644

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EA + ++++PI P  GVWG +LSAC  H + ++G +VA+   + +PEN GYYI LSNMY 
Sbjct: 645 EAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYG 704

Query: 769 ALGRWKDA 776
           ++G+W +A
Sbjct: 705 SMGKWDEA 712



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 210/732 (28%), Positives = 350/732 (47%), Gaps = 77/732 (10%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S+ L++ Y++     SS  +F  T  KD   WN++I +   N        F+ +M  +  
Sbjct: 67  SSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNT 126

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD-SSLCNVFVNMYAKCGDLNSSE 128
             +  T+ +IV+   ++  L++G+ +H L  K+G+ A+ S++ + FV MYAKCG +  + 
Sbjct: 127 PPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDAS 186

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEK---CLLYFREMGWSGEQADNVSLSSAVAASA 185
             F  +   D VSW  ++ G +HN+  EK   CL   R +G  GE+ ++ +L     A  
Sbjct: 187 LMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACG 246

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            LG +  G+ +H L +K G   S  V   +SL+SMYS+CG++E A  +F  +  KDV SW
Sbjct: 247 NLGAMIAGRCLHGLAVKTGLGCSQVVQ--SSLLSMYSKCGNVEEAHNSFCQVVDKDVFSW 304

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            ++I   A  G   E  +L  +MQ+   V PD   V  ++    +S+++REG++ HG  +
Sbjct: 305 TSVIGVCARFGFMNECLNLFWDMQV-DDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIV 363

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
           RR    D  + N+L+  Y K  +L+ AE LF+ +   +   SWN+M+ G           
Sbjct: 364 RRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSK-ESWNTMVFGY---------- 412

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
                                   +HC+ +K     +    N+L+ MY   G+L  A+ +
Sbjct: 413 ------------------------VHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKM 448

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             R     D   WN +I + T +GH+ EAI  F  M  ++  +P+S TLV V+SAC +L 
Sbjct: 449 FCRTQR--DVVTWNTLISSYTHSGHYAEAITLFDEMISEK-LNPNSATLVIVLSACCHLP 505

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              +GK +H    +    L+  +  AL+ MY +C  ++ +  +F S    ++ +WN MIS
Sbjct: 506 SLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMIS 565

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            +  +     A+E+F+ +E    +PN I+ +S+LSACT  G +  GKQ+   +       
Sbjct: 566 GYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRM------- 618

Query: 603 NSFISSALLDMYSNCKSNAA-WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
                      Y + K N   ++ M    G  G   EA +L   M    I P      +L
Sbjct: 619 ----------QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSM---PICPDGGVWGTL 665

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQE---AYEFIKNL 717
           LSAC     ++ G++     +E     PE + +++ + +M G  GK  E   A E +K  
Sbjct: 666 LSACKIHNEIEIGIRVAKCAIES---DPENDGYYIMLSNMYGSMGKWDEAERARELMKER 722

Query: 718 PIQPKPGVWGAM 729
            I  + G W A+
Sbjct: 723 GIGKRAG-WSAV 733



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 132/571 (23%), Positives = 235/571 (41%), Gaps = 94/571 (16%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  +    +S +  Y+     E +  +F E   +DVV+W A++   V N     GL    
Sbjct: 162 FAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLC 221

Query: 63  EMVE---EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           EM     +G + +S TL     A   +  +  GR +H L++K G+     + +  ++MY+
Sbjct: 222 EMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYS 281

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG++  +  +F  +   D  SW +++  C    +  +CL  F +M     Q D+V    
Sbjct: 282 KCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDM-----QVDDVYPDG 336

Query: 180 AVAASACLG-----ELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAER 232
            V +   LG      +  GK  H L ++  Y  +D    +V N+L+SMY + G +  AE+
Sbjct: 337 IVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDD----TVNNALLSMYCKFGTLNPAEK 392

Query: 233 AF---------------------------------------------------WGMTC-- 239
            F                                                   W M C  
Sbjct: 393 LFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRT 452

Query: 240 -KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DVV+WN +I  +  +G + EA  L  EM +   + P+ AT+V ++S C     L +G+
Sbjct: 453 QRDVVTWNTLISSYTHSGHYAEAITLFDEM-ISEKLNPNSATLVIVLSACCHLPSLEKGK 511

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH Y        ++ +  +L+D Y+K   L ++  LFN++    D++SWN MISG    
Sbjct: 512 MVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKE-KDVISWNVMISGYGLH 570

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   +F++M     + +  T L++L +C     ++ GK +           N    
Sbjct: 571 GDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHF 630

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             +  +    G+L  A  L+Q +    D   W  ++ AC  +   +  I+  K   +   
Sbjct: 631 ACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIE--- 687

Query: 467 ASPDS----VTLVNVISACGNLELAFEGKSL 493
           + P++    + L N+  + G  + A   + L
Sbjct: 688 SDPENDGYYIMLSNMYGSMGKWDEAERAREL 718



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 10/157 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   T+L+  Y+     E S  LF     KDV++WN MI+    +      +  F
Sbjct: 521 GFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVF 580

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV----HCLSIKAGMIADSSLCNVFVNM 117
            +M +  ++ ++ T L ++SA T    + +G+ +       SIK  +   + + ++    
Sbjct: 581 QQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLL--- 637

Query: 118 YAKCGDLNSSECTFSGMH-CADTVSWNTIMSGC-LHN 152
             + G+L  +E     M  C D   W T++S C +HN
Sbjct: 638 -GRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHN 673


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 204/633 (32%), Positives = 321/633 (50%), Gaps = 54/633 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVS----VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           L  G+++HA  IK+     PY+S    + N+LI  Y++CG +  A+  F  +  K+VVS+
Sbjct: 23  LKKGQILHAHIIKI-----PYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSY 77

Query: 246 NAIIDGFALNGKFEEAFDL-LHEMQLMRSVEPDIATVVTLISLCADSLLLR-EGRSVHGY 303
           N +I G + NG     F L L    +  ++ PD  T   + +  A +L    + R VH  
Sbjct: 78  NCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVL 137

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKE 358
            I+     D+ + +SL++FY K   + +A  LF+ + P  +LVSW +MISG     + KE
Sbjct: 138 GIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRM-PERNLVSWTTMISGYASKQMAKE 196

Query: 359 MLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            L +           ++F F+++L+ L     PE ++ GK +HC  +K G       +NA
Sbjct: 197 ALGVFGLMRLVEGNLNEFVFTSVLSALVC---PEFVDSGKQVHCVVVKNGVLEFVSVLNA 253

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG+L  +  L +  S + +   W+ +I   +Q G   +A+K F  M       
Sbjct: 254 LVTMYAKCGNLNYSLMLFEMCS-DKNAITWSALITGYSQAGDSHKALKLFSKM-HYAGFV 311

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSAS 526
           P   TLV V+ AC ++    EGK  HG  LKS  G +T++    AL+ MY +      A 
Sbjct: 312 PSEFTLVGVLKACSDVAAIEEGKQTHGYLLKS--GYETQIYTATALVDMYAKFGFTGDAR 369

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
             F+     +L  W  +I+ + QN     AL ++  ++     PNE+++ S+L AC+ L 
Sbjct: 370 KGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLA 429

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L  GKQIH      G      I SAL  MY+ C               +   +W++MIS
Sbjct: 430 ALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMIS 489

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
               +G G EA+ELF EM   G +P   + +++LSACSH G+V  G  Y+N M +E+ + 
Sbjct: 490 GLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLV 549

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  EH+ C+VD+L R+GKL EA EFI++  I     +W  +L AC +H + ++G    E 
Sbjct: 550 PRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEK 609

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L +L       Y+ LS++Y A+GR  D V + +
Sbjct: 610 LMELGSRESSAYVLLSSIYTAMGRLADVVRVRR 642



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 256/524 (48%), Gaps = 35/524 (6%)

Query: 89  LKQGRVVHCLSIKAGMIAD-SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           LK+G+++H   IK   ++  + L N  +  YAKCG L+ ++  F  +   + VS+N ++ 
Sbjct: 23  LKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIH 82

Query: 148 GCLHNNYPEK--CLLYFREMGWSGEQADNVSLSSAVAASAC-LGELSYGKVIHALGIKLG 204
           G  HN        L  FR M  +    D  +      A+A  LG     + +H LGIK  
Sbjct: 83  GLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTA 142

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
             D  +V   +SL++ Y + G +  A + F  M  +++VSW  +I G+A     +EA  +
Sbjct: 143 SIDDVFVG--SSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGV 200

Query: 265 LHEMQLMRSVEPDIATVV--TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
                LMR VE ++   V  +++S       +  G+ VH   ++  +   + ++N+L+  
Sbjct: 201 F---GLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTM 257

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           Y+K  +L+ + +LF   +  N  ++W+++I+G            LF +M Y     S  T
Sbjct: 258 YAKCGNLNYSLMLFEMCSDKNA-ITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFT 316

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN---CGDLVAAFSLLQ 427
           L+ +L +C+   ++E GK  H + LK G+        AL+ MY      GD    F  L 
Sbjct: 317 LVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLL 376

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
                 D   W  +I    QNG  +EA+  +  M Q +   P+ +T+ +V+ AC NL   
Sbjct: 377 ----EPDLVLWTSIIAGYVQNGKNEEALSMYGRM-QMRKILPNELTMASVLKACSNLAAL 431

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
            +GK +H   +K  +G +  +++AL TMY +C  ++    +F      ++ +WN MIS  
Sbjct: 432 EQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGL 491

Query: 548 SQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           SQN     ALELF  +  E   P+ I+ V++LSAC+ +G+++ G
Sbjct: 492 SQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRG 535



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 255/555 (45%), Gaps = 25/555 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN--RCVVMGLHFFGEMVEE 67
           + +L+  Y+   +   +  +F    +K+VV++N +I     N  +     L  F  M+  
Sbjct: 46  ANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIAN 105

Query: 68  GIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            I  D+ T   +  +A   + C    R VH L IK   I D  + +  VN Y K G +  
Sbjct: 106 NILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFE 165

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   + VSW T++SG       ++ L  F  M       +    +S ++A  C
Sbjct: 166 ARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVC 225

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              +  GK +H + +K G  +  +VSV N+L++MY++CG++  +   F   + K+ ++W+
Sbjct: 226 PEFVDSGKQVHCVVVKNGVLE--FVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWS 283

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G++  G   +A  L  +M     V P   T+V ++  C+D   + EG+  HGY ++
Sbjct: 284 ALITGYSQAGDSHKALKLFSKMHYAGFV-PSEFTLVGVLKACSDVAAIEEGKQTHGYLLK 342

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLY 361
                 +    +L+D Y+K      A   F+ +    DLV W S+I+G  +     E L 
Sbjct: 343 SGYETQIYTATALVDMYAKFGFTGDARKGFDFLLE-PDLVLWTSIIAGYVQNGKNEEALS 401

Query: 362 LCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +  +     +L       ++L +C++  +LE GK IH   +K G        +AL  MY 
Sbjct: 402 MYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYA 461

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L     + +R+    D   WN +I   +QNGH +EA++ F+ M + +   PD +T 
Sbjct: 462 KCGSLEEGVLIFRRMLQR-DIVSWNAMISGLSQNGHGREALELFEEM-RLEGTKPDHITF 519

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC 532
           V V+SAC ++ +   G +   +       L  RV++   ++ +  R   +  A    ES 
Sbjct: 520 VTVLSACSHMGIVKRGWAYFNMMFDEFC-LVPRVEHYACMVDVLSRAGKLNEAKEFIESA 578

Query: 533 -YNCNLCTWNCMISA 546
             +  +C W  ++ A
Sbjct: 579 IIDHGMCLWRILLPA 593



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 184/383 (48%), Gaps = 16/383 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             +SL+  Y  V     +  LF     +++V+W  MI+     +     L  FG M    
Sbjct: 149 VGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVE 208

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              +      ++SAL     +  G+ VHC+ +K G++   S+ N  V MYAKCG+LN S 
Sbjct: 209 GNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSL 268

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      + ++W+ +++G        K L  F +M ++G      +L   + A + + 
Sbjct: 269 MLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVA 328

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  GK  H   +K GYE   Y +   +L+ MY++ G    A + F  +   D+V W +I
Sbjct: 329 AIEEGKQTHGYLLKSGYETQIYTA--TALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSI 386

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NGK EEA  +   MQ MR + P+  T+ +++  C++   L +G+ +H   I+  
Sbjct: 387 IAGYVQNGKNEEALSMYGRMQ-MRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYG 445

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           LG +L + ++L   Y+K  SL +  L+F  +    D+VSWN+MISG            LF
Sbjct: 446 LGPELSIRSALSTMYAKCGSLEEGVLIFRRML-QRDIVSWNAMISGLSQNGHGREALELF 504

Query: 357 KEMLYLCSQFSFSTLLAILPSCN 379
           +EM    ++    T + +L +C+
Sbjct: 505 EEMRLEGTKPDHITFVTVLSACS 527



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 147/296 (49%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    +L+T Y+       SL LF    +K+ +TW+A+IT   +       L  F
Sbjct: 243 GVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLF 302

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G      TL+ ++ A + +  +++G+  H   +K+G           V+MYAK 
Sbjct: 303 SKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKF 362

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F  +   D V W +I++G + N   E+ L  +  M       + ++++S +
Sbjct: 363 GFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVL 422

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IHA  IK G    P +S+ ++L +MY++CG +E     F  M  +D
Sbjct: 423 KACSNLAALEQGKQIHARTIKYGL--GPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRD 480

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +VSWNA+I G + NG   EA +L  EM+L    +PD  T VT++S C+   +++ G
Sbjct: 481 IVSWNAMISGLSQNGHGREALELFEEMRL-EGTKPDHITFVTVLSACSHMGIVKRG 535


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/581 (30%), Positives = 299/581 (51%), Gaps = 40/581 (6%)

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLC 288
           A + F  MT + +  WN ++   +   ++EE   L H   + R  E PD  T+   +  C
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV--LYHFSHMFRDEEKPDNFTLPVALKAC 70

Query: 289 ADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            +   +  G  +HG+  + + LG DL + +SL+  Y K   + +A  +F+ +    D+V+
Sbjct: 71  GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVT 129

Query: 348 WNSMISGL-----------FKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQ 394
           W+SM+SG            F   + + S  +    TL+ ++ +C    +   G+ +H + 
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++ GFSN+   VN+L++ Y        A +L + I+   D   W+ VI    QNG   EA
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVIACYVQNGAAAEA 248

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           +  F  M       P+  T++ V+ AC       +G+  H LA++  +  + +V  AL+ 
Sbjct: 249 LLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEI 570
           MY +C   + A  VF      ++ +W  +IS F+ N    R++E F  +  E    P+ I
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
            +V +L +C++LG L   K  H +V   GF  N FI ++L+++YS C             
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEG 674
             K    W+S+I+ YG HGKG +A+E F+ M  S  ++P + + +S+LSACSH+GL+ EG
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L+ +  M+ +Y + P  EH+  +VD+LGR G L  A E  K +P  P P + G +L AC 
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            H + +M + VA+ LF+LE  + GYY+ +SN+Y   G W++
Sbjct: 548 IHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 264/551 (47%), Gaps = 37/551 (6%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M       WNT++         E+ L +F  M    E+ DN +L  A+ A   L E+
Sbjct: 17  FGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREV 76

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           +YG++IH   +K        + V +SLI MY +CG +  A R F  +   D+V+W++++ 
Sbjct: 77  NYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF  NG   +A +    M +   V PD  T++TL+S C      R GR VHG+ IRR   
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            DL ++NSL++ Y+KS +  +A  LF  IA   D++SW+++I+             +F +
Sbjct: 196 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDVISWSTVIACYVQNGAAAEALLVFND 254

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M+   ++ + +T+L +L +C +   LE G+  H   ++ G         AL+ MY+ C  
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
              A+++  RI    D   W  +I   T NG    +I+ F  M  + N  PD++ +V V+
Sbjct: 315 PEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            +C  L    + K  H   +K     +  +  +L+ +Y RC  + +AS VF      +  
Sbjct: 374 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 433

Query: 539 TWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            W  +I+ +  +    +ALE F H+    E +PNE++ +SILSAC+  G++  G +I   
Sbjct: 434 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI--- 490

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
            F L           +++ Y    +   ++ ++   G  G    AIE+   M  S   PT
Sbjct: 491 -FKL-----------MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS---PT 535

Query: 655 KSSVISLLSAC 665
              + +LL AC
Sbjct: 536 PQILGTLLGAC 546



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 215/472 (45%), Gaps = 28/472 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           + L   +SL+  Y        +L +F E    D+VTW++M++   +N      + FF  M
Sbjct: 94  SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153

Query: 65  V-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           V    +  D  TL+ +VSA T+++  + GR VH   I+ G   D SL N  +N YAK   
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F  +   D +SW+T+++  + N    + LL F +M   G + +  ++   + A
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A   +L  G+  H L I+ G E    V V+ +L+ MY +C   E A   F  +  KDVV
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETE--VKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV 331

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW A+I GF LNG    + +    M L  +  PD   +V ++  C++   L + +  H Y
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-------- 355
            I+     +  +  SL++ YS+  SL  A  +FN IA + D V W S+I+G         
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA-LKDTVVWTSLITGYGIHGKGTK 450

Query: 356 ----FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN--- 407
               F  M+     + +  T L+IL +C+    +  G  I     KL  ++  +  N   
Sbjct: 451 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEH 506

Query: 408 --ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
              L+ +    GDL  A  + +R+  +        ++ AC   QNG   E +
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 3/298 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L    SLL  Y+    F+ ++ LF     KDV++W+ +I   V+N      L  
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+++G   +  T+L ++ A    + L+QGR  H L+I+ G+  +  +    V+MY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSS 179
           C     +   FS +   D VSW  ++SG   N    + +  F  M   +  + D + +  
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + + + LG L   K  H+  IK G++ +P++    SL+ +YS+CG +  A + F G+  
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA--SLVELYSRCGSLGNASKVFNGIAL 429

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           KD V W ++I G+ ++GK  +A +  + M     V+P+  T ++++S C+ + L+ EG
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 195/646 (30%), Positives = 341/646 (52%), Gaps = 40/646 (6%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSV-TNSLISMYSQCGDI 227
           QA+  + ++ + A + L  L  GK +H L ++  L  ++ P  S+  N +I MY +CG  
Sbjct: 7   QAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCT 66

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT-LIS 286
           + A   F  M  ++VV+W ++I  F   G F +A  L  +M L+  V PD  T  + L+ 
Sbjct: 67  DLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKM-LLSGVSPDRITFTSILLK 125

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
                  L EG+ VH + ++     D ++MN +++ Y K   + +A  +F++I   N + 
Sbjct: 126 WSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPN-VF 184

Query: 347 SWNSMISGLFK-----EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQ 394
           SW  +I+   +     E+L L S+ + +       T   +L +C +  +LE  K +H   
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAAT 244

Query: 395 LK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           +   G   +     AL+++Y  CG L  AF +  +I  N D   W+ +I A  Q+G  + 
Sbjct: 245 ISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQID-NKDIVSWSSMIAAFAQSGQAKS 303

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           AI+    M   +   P++VT VNV+ A  +L+    GK +H   +++    D  + +AL+
Sbjct: 304 AIQLLMLM-DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALV 362

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEI 570
            MY     +++A ++FES    ++ +W+ MI+ +SQN++  RAL LFR +E    +PN +
Sbjct: 363 KMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSV 422

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           + VS + AC  +G LR G Q+H  V  LG  ++  +++AL+++Y  C             
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGM 482

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K+   W+S+  AYG +G G  +++L H M   G++P     +++L +C+++G + +GL
Sbjct: 483 KKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGL 542

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
            YYN M +++ + P  EH  C+VD+LGR+GKL+ A + I  +  +     W  +L+AC  
Sbjct: 543 HYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKA 601

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           H DT    + AE +F+LEP+N   Y+ LS+++ A G W+ A E  +
Sbjct: 602 HNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRR 647



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 249/532 (46%), Gaps = 28/532 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIAD-----SSLCNVFVNMYAKCGDLNSSECTFSG 133
           I++A + +  L +G+ VH L ++  ++ D     S L N+ + MY +CG  + +   F  
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA-SACLGELSY 192
           M   + V+W +++S      +    ++ FR+M  SG   D ++ +S +   S     L  
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H+  ++ GYE      V N ++ MY +CGD+E A   F  +   +V SW  II  +
Sbjct: 136 GKRVHSHIMQTGYEGDRM--VMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL-LGY 311
           A NG   E   LL  M     V+PD  T  T++  C     L E + +H   I    L  
Sbjct: 194 AQNGHCMEVLRLLSRMN-QAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF 366
           D  +  +L++ Y K  +L +A  +F  I    D+VSW+SMI     SG  K  + L    
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T + +L +  S ++ ++GK IH   ++ G+S++    +AL+ MY N G +
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWV 371

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A S+ +  S   D   W+ +I   +QN     A+  F+ M +     P+SVT V+ I 
Sbjct: 372 ETARSIFES-SRERDVVSWSSMIAGYSQNESPARALSLFREM-EVDGVQPNSVTFVSAID 429

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC  +     G  LH       +  D  V  AL+ +YG+C  ++ A  VF      NL T
Sbjct: 430 ACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLT 489

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           W  +  A+ QN    R+L+L   +E +   P+ I  V+IL +C   G +  G
Sbjct: 490 WTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKG 541



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 231/479 (48%), Gaps = 47/479 (9%)

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL-----LMMNSLMDFYSKS 326
           R ++ +I+    +++ C+D   L EG+ VHG  +R  L  D      L+ N ++  Y + 
Sbjct: 4   REIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRC 63

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
                A  +F+ +   N +V+W S+IS             LF++ML         T  +I
Sbjct: 64  GCTDLALDVFDRMKDQN-VVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSI 122

Query: 375 LPSCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           L   +  E +L+ GK +H   ++ G+  + + +N ++ MY  CGD+  A ++   I  + 
Sbjct: 123 LLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI-QDP 181

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           +   W I+I A  QNGH  E ++    M  Q    PD  T   V+ AC  +    E K L
Sbjct: 182 NVFSWTIIIAAYAQNGHCMEVLRLLSRMN-QAGVKPDGYTFTTVLGACTAVGALEEAKIL 240

Query: 494 HGLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           H   + S  +  D  V  ALI +YG+C  ++ A  VF    N ++ +W+ MI+AF+Q+  
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQ 300

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              A++L   ++ E   PN ++ V++L A T L   ++GK+IH  +   G+ ++  ++SA
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSA 360

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+ MY N                +   +WSSMI+ Y  +     A+ LF EM   G++P 
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPN 420

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNML---EEYDVRPETEHHVCIVDMLGRSGKLQEA 710
             + +S + AC+  G +  G Q +  +     + DV   T     +V++ G+ G+L+EA
Sbjct: 421 SVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVAT----ALVNLYGKCGRLEEA 475



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/573 (23%), Positives = 255/573 (44%), Gaps = 30/573 (5%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL-IIVSALT 84
           +L +F    +++VV W ++I+A          +  F +M+  G+  D  T   I++    
Sbjct: 69  ALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSG 128

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           +   L +G+ VH   ++ G   D  + N+ V MY KCGD+  +   F  +   +  SW  
Sbjct: 129 RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTI 188

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           I++    N +  + L     M  +G + D  + ++ + A   +G L   K++HA  I   
Sbjct: 189 IIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISST 248

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
             D    +V  +LI++Y +CG +E A   F  +  KD+VSW+++I  FA +G+ + A  L
Sbjct: 249 GLDRD-AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQL 307

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           L  M L   V P+  T V ++         + G+ +H   ++     D+ + ++L+  Y 
Sbjct: 308 LMLMDL-EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYC 366

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
               +  A  +F + +   D+VSW+SMI+G            LF+EM     Q +  T +
Sbjct: 367 NWGWVETARSIFES-SRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFV 425

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           + + +C    +L  G  +H     LG   +     AL+++Y  CG L  A ++   +   
Sbjct: 426 SAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-K 484

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            +   W  + +A  QNGH   ++K    M + Q   PD +  V ++ +C      + G+ 
Sbjct: 485 KNLLTWTSIAMAYGQNGHGSRSLKLLHGM-ELQGMKPDGIVFVAILVSCN-----YAGQM 538

Query: 493 LHGLALKSLMGLDTRVQNA------LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             GL   +LM  D  +  A      ++ + GR   +++A  +  +    +   W  +++A
Sbjct: 539 SKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTA 598

Query: 547 FSQNKAEVRALELFRHL-EFEPNEISIVSILSA 578
              +    RA      + + EP   +   +LS+
Sbjct: 599 CKAHNDTARAARAAEKIFQLEPKNATPYVLLSS 631



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 166/335 (49%), Gaps = 14/335 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y      E +  +F +  NKD+V+W++MI A  ++      +     M  EG+R
Sbjct: 258 TALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVR 317

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ T + ++ A+T +   + G+ +H   ++AG   D  L +  V MY   G + ++   
Sbjct: 318 PNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSI 377

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D VSW+++++G   N  P + L  FREM   G Q ++V+  SA+ A A +G L
Sbjct: 378 FESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGAL 437

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G  +H     LG +    V V  +L+++Y +CG +E AE  F GM  K++++W +I  
Sbjct: 438 RRGTQLHERVRCLGLDKD--VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  NG    +  LLH M+L + ++PD    V ++  C  +  + +G  +H Y    L+ 
Sbjct: 496 AYGQNGHGSRSLKLLHGMEL-QGMKPDGIVFVAILVSCNYAGQMSKG--LHYY---NLMT 549

Query: 311 YDLLMMNS------LMDFYSKSNSLSKAELLFNAI 339
            D  +  +      ++D   ++  L  AE L N +
Sbjct: 550 QDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTM 584



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 146/326 (44%), Gaps = 10/326 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +++L+  Y N  + E++ ++F  +  +DVV+W++MI    +N      L  F EM  +G+
Sbjct: 358 TSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + +S T +  + A   +  L++G  +H      G+  D  +    VN+Y KCG L  +E 
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEA 477

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F GM   + ++W +I      N +  + L     M   G + D +   + + +    G+
Sbjct: 478 VFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQ 537

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           +S G   + L +   +  +P V     ++ +  + G +EAAE+    M  +  ++W  ++
Sbjct: 538 MSKGLHYYNL-MTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLL 596

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCAD---SLLLREGRSVHGYA 304
                +     A       + +  +EP  AT   L+S   CA           R + G  
Sbjct: 597 TACKAHNDTARA---ARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRG 653

Query: 305 IRRLLGYDLLMM-NSLMDFYSKSNSL 329
           ++RLLG   + + + + +F + S+ L
Sbjct: 654 VQRLLGRSSIEIGDRVHEFVAASDVL 679


>gi|302815759|ref|XP_002989560.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
 gi|300142738|gb|EFJ09436.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
          Length = 744

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 208/734 (28%), Positives = 356/734 (48%), Gaps = 45/734 (6%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E  I    TTL+  +SA      L +GR +H  +I   +  ++ + N  + MY KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHS 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L  +E  F G+   D V+WNT++    HN  P   +  +  MG SG++ ++V+    + A
Sbjct: 61  LAEAERLFHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMG-SGDR-NSVTFLGVLEA 118

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + LG+L  G+ + +      + D   V V  +++ MY +C  IE A + F  M  K+VV
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDD--VVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVV 176

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA++  +A NG    A   L EM L    + +  T + +I +      L  GRS+H  
Sbjct: 177 SWNALVTSYARNGHPCGALRALREMDL-DGTKLNPVTFLLVIEVATQLGSLSLGRSIHLR 235

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
             R   G    + N+L+  Y K  +L ++  +F A+A   D+VSW +MI+          
Sbjct: 236 VTRGGDGGGTRLENALISMYGKLENLEESLRVFEAMAN-KDVVSWTAMITAYAQNGRERL 294

Query: 355 ---LFKEM-LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
              L++ M L    +    T  A+L +C+    L  GK I+       F  +     +L+
Sbjct: 295 ALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLV 354

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            ++  C  L  A  + + IS + D   +N ++ A  QNGH  +A+  ++ M   +   P 
Sbjct: 355 GLHGKCHCLEDAKEVFESIS-SRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPT 413

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +    + AC  L+    GKSLHG    + + LD  +   L+  YG    ++ A  +FE
Sbjct: 414 DTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFE 473

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
                ++ +++ MI A+SQN  E RA+ ++  ++    +P+E++ +S+LSAC+       
Sbjct: 474 QMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSS----NL 529

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
             ++H  + H GF+ +  + +AL+ MY+                 + + +W++MISA+  
Sbjct: 530 ATEVHTEILHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFAR 589

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG   EA  LF  M   GI    S++ S+L + S SG VD    ++  M  ++   P  E
Sbjct: 590 HG--CEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSG-VDAARGFFMAMQGDFGTCPAAE 646

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+L RSG++ EA E + ++P++P    W  +L AC  HGD +  K  A  + ++
Sbjct: 647 HYSCLVDLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACKTHGDLEQAKSAARGVLEV 706

Query: 753 EPENVGYYISLSNM 766
           +  + G Y+  S +
Sbjct: 707 DSHSPGAYLVSSTL 720



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 175/688 (25%), Positives = 302/688 (43%), Gaps = 44/688 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + SL+  Y        +  LF+    KD VTWN MI A   N    + +  +  M   G 
Sbjct: 48  ANSLIAMYGKCHSLAEAERLFHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM-GSGD 106

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R +S T L ++ A + +  L  GR V      +    D  +    V MY +C  +  +  
Sbjct: 107 R-NSVTFLGVLEACSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQ 165

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + VSWN +++    N +P   L   REM   G + + V+    +  +  LG 
Sbjct: 166 RFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGS 225

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS G+ IH    +    D     + N+LISMY +  ++E + R F  M  KDVVSW A+I
Sbjct: 226 LSLGRSIHLRVTR--GGDGGGTRLENALISMYGKLENLEESLRVFEAMANKDVVSWTAMI 283

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +A NG+   A +L   M+L + V PD  T   ++  C+    L  G+ ++        
Sbjct: 284 TAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDF 343

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  +  SL+  + K + L  A+ +F +I+   D +++N+M++             L++
Sbjct: 344 DVDAALKTSLVGLHGKCHCLEDAKEVFESISS-RDRLAYNAMLAAYAQNGHPDDALNLYR 402

Query: 358 EMLYLCSQFSFSTLLAI-LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +M+ L       T  A+ L +C + + L  GKS+H      G   + +    L+  Y   
Sbjct: 403 QMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEV 462

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  + +++    D   ++ +I A +QNG    A+  +  M  QQ   PD V  ++
Sbjct: 463 GSLEEAERIFEQMPVK-DVFSYSAMIGAYSQNGCEGRAMTIYAEM-DQQGIKPDEVAFIS 520

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+SAC +  LA E   +H   L +    D  +  AL+ MY +  +++ +  +F +  + +
Sbjct: 521 VLSACSS-NLATE---VHTEILHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRD 576

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE-FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
             +W  MISAF+++  E + L     L+  +    ++ S+L + +Q GV        G  
Sbjct: 577 SVSWTAMISAFARHGCEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSGV----DAARG-- 630

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           F +  Q +          +  C +   +S ++      G+  EA EL   M    + P  
Sbjct: 631 FFMAMQGD----------FGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMP---LEPDF 677

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLE 683
              ++LL AC   G +++       +LE
Sbjct: 678 VPWMTLLGACKTHGDLEQAKSAARGVLE 705



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 3/149 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A     T+L+  Y+     E S  +F    ++D V+W AMI+A   + C    L  F
Sbjct: 541 GFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFARHGCEAKLL--F 598

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +GI    +TL  ++ + +Q            +    G    +   +  V++ A+ 
Sbjct: 599 QGMALDGIDAKGSTLTSMLVSYSQSGVDAARGFFMAMQGDFGTCPAAEHYSCLVDLLARS 658

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           G +  ++     M    D V W T++  C
Sbjct: 659 GRVGEAKELVDSMPLEPDFVPWMTLLGAC 687


>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 210/746 (28%), Positives = 369/746 (49%), Gaps = 52/746 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSEC 129
           +D+  L+++   +  ++ L +    H L++ +G   +  + +  +++Y     D +S   
Sbjct: 5   YDAGELILVSKHIRTLDSLLR---FHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCST 61

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   DT  +N+ +      +   + L  F  M  S    ++ +L   V+A+A L  
Sbjct: 62  LFHSLPSKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTL 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L +G  +HAL  K G   S     + S +S+YS+CG +E A + F  +  +DVV+W A+I
Sbjct: 122 LPHGASLHALASKTGLFHS-----SASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALI 176

Query: 250 DGFALNGKFEEAFDLLHEMQ--LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
            G   NG+ E+    L  +   +    +P+  T       C +   + EG  +HG  ++ 
Sbjct: 177 IGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKN 236

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
             G    + +S++D YSK     +A   F  +    DL+ W S+I      G+  E L L
Sbjct: 237 --GVASFIQSSVLDMYSKCGVPREAYRSFCEVI-HKDLLCWTSVIGVYARIGMMGECLRL 293

Query: 363 CSQFSFSTLL--AILPSC------NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             +   + +    ++  C      NS +  + GK+ H   ++  + ++    ++L+ MY 
Sbjct: 294 FREMQENEIRPDGVVVGCVLSGFGNSMDVFQ-GKAFHGVIIRRYYVDDEKVNDSLLFMYC 352

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G L  A  +      + D   WN ++    + G   + ++ F+ M Q      +++ +
Sbjct: 353 KFGMLSLAERIFPLCQGSGDG--WNFMVFGYGKVGENVKCVELFREM-QWLGIHSETIGI 409

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLM-GLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + I++C  L     G+S+H   +K  + G +  V N+L+ MYG+C  +  A  +F +  
Sbjct: 410 ASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNTS- 468

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             ++ +WN +IS+    K    A+ LF  +  E   PN  ++V +LSAC+ L  L  G++
Sbjct: 469 ETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGER 528

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H ++   GF  N  + +AL+DMY+ C               K    W++MIS YG +G 
Sbjct: 529 VHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGY 588

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
              A+E+F  M  S + P   + +SLLSAC+H+GLV+EG +Y    ++ Y V P  +H+ 
Sbjct: 589 AESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEG-KYMFARMKSYSVNPNLKHYT 647

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR G +QEA   + ++PI P  GVWGA+L  C  H   +MG ++A+    LEPE
Sbjct: 648 CMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPE 707

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
           N GYYI ++NMY  +GRW++A  + +
Sbjct: 708 NDGYYIIMANMYSFIGRWEEAENVRR 733



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 196/730 (26%), Positives = 337/730 (46%), Gaps = 56/730 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLA-LFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           G   +L  ++ L++ Y +++   SS + LF+   +KD   +N+ + +          L  
Sbjct: 34  GHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKSLFSRSLFPRVLSL 93

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M    +  +  TL I+VSA   +  L  G  +H L+ K G+   S+    FV++Y++
Sbjct: 94  FSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLFHSSA---SFVSLYSR 150

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK---CLLYFREMGWSGEQADNVSL 177
           CG +  +   F  +   D V+W  ++ G +HN  PEK   CL +   +    E+ +  + 
Sbjct: 151 CGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTW 210

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
                A   LG +S G  +H + +K G        + +S++ MYS+CG    A R+F  +
Sbjct: 211 EGGFLACGNLGAVSEGSCLHGVVVKNGVAS----FIQSSVLDMYSKCGVPREAYRSFCEV 266

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KD++ W ++I  +A  G   E   L  EMQ    + PD   V  ++S   +S+ + +G
Sbjct: 267 IHKDLLCWTSVIGVYARIGMMGECLRLFREMQ-ENEIRPDGVVVGCVLSGFGNSMDVFQG 325

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           ++ HG  IRR    D  + +SL+  Y K   LS AE +F       D   WN M+ G   
Sbjct: 326 KAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSGD--GWNFMVFGYGK 383

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+EM +L        + + + SC    ++  G+SIHC  +K       I 
Sbjct: 384 VGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNIS 443

Query: 406 V-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           V N+L+ MY  CG +  A+ +    +  +D   WN +I +       +EA+  F  M  +
Sbjct: 444 VTNSLVEMYGKCGKMTFAWRIFN--TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMV-R 500

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           ++  P++ TLV V+SAC +L    +G+ +H    +S   L+  +  ALI MY +C  ++ 
Sbjct: 501 EDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQK 560

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQ 581
           +  VF+S    ++  WN MIS +  N     ALE+F+H+E     PN I+ +S+LSAC  
Sbjct: 561 SRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAH 620

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE 641
            G++  GK +                 A +  YS   +   ++ M+   G +G   EA  
Sbjct: 621 AGLVEEGKYMF----------------ARMKSYSVNPNLKHYTCMVDLLGRYGNVQEAEA 664

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDM 700
           +   M    I P      +LL  C     ++ G++     +   D+ PE + +++ + +M
Sbjct: 665 MVLSM---PISPDGGVWGALLGHCKTHNQIEMGIRIAKYAI---DLEPENDGYYIIMANM 718

Query: 701 LGRSGKLQEA 710
               G+ +EA
Sbjct: 719 YSFIGRWEEA 728



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 6/252 (2%)

Query: 1   RGFL--AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           +GFL   ++  + SL+  Y        +  +F  T   DVV+WN +I++ V  +     +
Sbjct: 434 KGFLDGKNISVTNSLVEMYGKCGKMTFAWRIF-NTSETDVVSWNTLISSHVHIKQHEEAV 492

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           + F +MV E  + ++ TL++++SA + +  L++G  VHC   ++G   +  L    ++MY
Sbjct: 493 NLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMY 552

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AKCG L  S   F  M   D + WN ++SG   N Y E  L  F+ M  S    + ++  
Sbjct: 553 AKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFL 612

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S ++A A  G +  GK + A      Y  +P +     ++ +  + G+++ AE     M 
Sbjct: 613 SLLSACAHAGLVEEGKYMFAR--MKSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMP 670

Query: 239 C-KDVVSWNAII 249
              D   W A++
Sbjct: 671 ISPDGGVWGALL 682


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 299/611 (48%), Gaps = 100/611 (16%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  +NA I  F   G  E A +L+    + +  E +  T  +++ LCA      +G+ VH
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELI---CMCKKSELETKTYSSVLQLCAGLKSFTDGKKVH 122

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN------------------ 343
                  +G D  +   L+ FY+    L +   +F+ +   N                  
Sbjct: 123 SIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 344 --------------------------------DLVSWNSMISG------------LFKEM 359
                                           D++SWNSMISG            ++K+M
Sbjct: 183 ESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +YL      +T++++L  C +  +L  GK++H   +K  F       N L+ MY  CGDL
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  + +++   +  S W  +I   T++G    AIK  + M +++    D V + +++ 
Sbjct: 303 DGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGAIKLLQQM-EKEGVKLDVVAITSILH 360

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC        GK +H     + M  +  V NAL+ MY +C  +++A++VF +    ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           WN MI                   E +P+  ++  +L AC  L  L  GK+IHG++   G
Sbjct: 421 WNTMIG------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNG 462

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           +  +  +++AL+D+Y  C               K   +W+ MI+ YG HG G EAI  F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFN 522

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           EM ++GI P + S IS+L ACSHSGL+++G +++  M  ++++ P+ EH+ C+VD+L R+
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L +AYEFI+ LPI P   +WGA+L  C ++ D ++ ++VAE +F+LEPEN GYY+ L+
Sbjct: 583 GNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLA 642

Query: 765 NMYVALGRWKD 775
           N+Y    +W++
Sbjct: 643 NIYAEAEKWEE 653



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 260/600 (43%), Gaps = 97/600 (16%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD------- 138
           +     G+ VH +     +  D +L    V+ YA CGDL      F  M   +       
Sbjct: 112 LKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFM 171

Query: 139 --------------------------------------------TVSWNTIMSGCLHNNY 154
                                                        +SWN+++SG + N  
Sbjct: 172 VSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGL 231

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +++M + G   D  ++ S +   A  G LS GK +H+L IK  +E    ++ +
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR--INFS 289

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MYS+CGD++ A R F  M  ++VVSW ++I G+  +G+ + A  LL +M+    V
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME-KEGV 348

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D+  + +++  CA S  L  G+ VH Y     +  +L + N+LMD Y+K  S+  A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +F+ +  + D++SWN+MI  L  +           T+  +LP+C S  +LE GK IH + 
Sbjct: 409 VFSTMV-VKDIISWNTMIGELKPDS---------RTMACVLPACASLSALERGKEIHGYI 458

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           L+ G+S++    NAL+ +Y+ CG L  A  L   I  + D   W ++I     +G+  EA
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEA 517

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I TF  M +     PD V+ ++++ AC +  L  +G     + +K+   ++ ++++    
Sbjct: 518 IATFNEM-RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEH---- 571

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                                    + CM+   S+     +A E    L   P+     +
Sbjct: 572 -------------------------YACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L  C     +   +++   VF L   ENS     L ++Y+  +       +    G  G
Sbjct: 607 LLCGCRNYHDIELAEKVAERVFELE-PENSGYYVLLANIYAEAEKWEEVKRLREKIGKQG 665



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 207/446 (46%), Gaps = 51/446 (11%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           ES+  LF + C++DV++WN+MI+  V N     GL  + +M+  GI  D  T++ ++   
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
                L  G+ VH L+IK+      +  N  ++MY+KCGDL+ +   F  M   + VSW 
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++++G   +   +  +   ++M   G + D V+++S + A A  G L  GK +H   IK 
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKA 380

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
              +S  + V N+L+ MY++CG +EAA   F  M  KD++SWN +I              
Sbjct: 381 NNMESN-LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------------- 426

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                     ++PD  T+  ++  CA    L  G+ +HGY +R     D  + N+L+D Y
Sbjct: 427 ---------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTL 371
            K   L  A LLF+ I P  DLVSW  MI+G             F EM     +    + 
Sbjct: 478 VKCGVLGLARLLFDMI-PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFS 424
           ++IL +C+    LE G     W+       N   +   +  Y          G+L  A+ 
Sbjct: 537 ISILYACSHSGLLEQG-----WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGH 450
            ++ +    D + W  ++  C +N H
Sbjct: 591 FIETLPIAPDATIWGALLCGC-RNYH 615



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 29/355 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S +LL  YS     + +L +F +   ++VV+W +MI     +      +    
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M +EG++ D   +  I+ A  +   L  G+ VH       M ++  +CN  ++MYAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            + ++   FS M   D +SWNT++                      GE + D+ +++  +
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACVL 439

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  GK IH   ++ GY    +V+  N+L+ +Y +CG +  A   F  +  KD
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL +G    
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFF 556

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y ++     +  L     ++D  S++ +LSKA      +    D   W +++ G
Sbjct: 557 -YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610


>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
 gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
          Length = 740

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 209/734 (28%), Positives = 354/734 (48%), Gaps = 45/734 (6%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E  I    TTL+  +SA      L +GR +H  +I   +  ++ L N  + MY KC  
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHS 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L  +E  F  +   D V+WNT++    HN  P   +  +  MG SG++ ++V+    + A
Sbjct: 61  LAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMG-SGDR-NSVTFLGVLEA 118

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + LG+L  G+ + +      + D   V V  +++ MY +C  IE A + F  M  K+VV
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDD--VVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVV 176

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA++  +A NG    A   L EM L    + +  T + +I +      L  GRS+H  
Sbjct: 177 SWNALVTSYARNGHPCGALRALREMDL-DGTKLNPVTFLLVIEVATQLGSLSLGRSIHLR 235

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
             R   G    + N+L+  Y K  +L ++  +F  +A   D+VSW +MI+          
Sbjct: 236 ITRGGDGGGTRLENALISMYGKLENLEESLRVFEVMAN-KDVVSWTAMITAYAQNGHERL 294

Query: 355 ---LFKEM-LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
              L++ M L    +    T  A+L +C+    L  GK I+       F  +     +L+
Sbjct: 295 ALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLV 354

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            +Y  C  L  A  +   IS + D   +N ++ A  QNGH  +A+  ++ M   +   P 
Sbjct: 355 GLYGKCHCLEDAKEVFDSIS-SRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPT 413

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +    + AC  L+    GKSLHG    + + LD  +   L+  YG    ++ A  +FE
Sbjct: 414 DTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFE 473

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
                ++ +++ MI A+SQN  E RA+ ++  ++    +P+E++ +S+LSAC+       
Sbjct: 474 QMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSS----NL 529

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
             ++H  + H GF+ +  + +AL+ MY+                 + + +W++MISA+  
Sbjct: 530 ATEVHTEIVHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFAR 589

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG   EA  LF  M   GI    S++ S+L + S SG VD    ++  M  ++   P  E
Sbjct: 590 HG--CEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSG-VDAARGFFVAMQGDFGTCPAAE 646

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+L RSG++ EA E + ++P++P    W  +L AC  HGD +  K  A  + ++
Sbjct: 647 HYSCLVDLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACKTHGDLEQAKSAARGVLEV 706

Query: 753 EPENVGYYISLSNM 766
           +  + G Y+ LS +
Sbjct: 707 DSHSPGAYLVLSTL 720



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 175/688 (25%), Positives = 302/688 (43%), Gaps = 44/688 (6%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + SL+  Y        +  LF+    KD VTWN MI A   N    + +  +  M   G 
Sbjct: 48  ANSLIAMYGKCHSLAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM-GSGD 106

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R +S T L ++ A + +  L  GR V      +    D  +    V MY +C  +  +  
Sbjct: 107 R-NSVTFLGVLEACSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQ 165

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + VSWN +++    N +P   L   REM   G + + V+    +  +  LG 
Sbjct: 166 RFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGS 225

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           LS G+ IH    +    D     + N+LISMY +  ++E + R F  M  KDVVSW A+I
Sbjct: 226 LSLGRSIHLRITR--GGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAMI 283

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +A NG    A +L   M+L + V PD  T   ++  C+    L  G+ ++        
Sbjct: 284 TAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDF 343

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  +  SL+  Y K + L  A+ +F++I+   D +++N+M++             L++
Sbjct: 344 DVDAALKTSLVGLYGKCHCLEDAKEVFDSISS-RDRLAYNAMLAAYAQNGHPDDALNLYR 402

Query: 358 EMLYLCSQFSFSTLLAI-LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +M+ L       T  A+ L +C + + L  GKS+H      G   + +    L+  Y   
Sbjct: 403 QMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEV 462

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A  + +++    D   ++ +I A +QNG    A+  +  M  QQ   PD V  ++
Sbjct: 463 GSLEEAERIFEQMPVK-DVFSYSAMIGAYSQNGCEGRAMTIYAEM-DQQGIKPDEVAFIS 520

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+SAC +  LA E   +H   + +    D  +  AL+ MY +  +++ +  +F +  + +
Sbjct: 521 VLSACSS-NLATE---VHTEIVHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRD 576

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE-FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
             +W  MISAF+++  E + L     L+  +    ++ S+L + +Q GV        G  
Sbjct: 577 SVSWTAMISAFARHGCEAKLLFQGMALDGIDAKGSTLTSMLVSYSQSGV----DAARG-- 630

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           F +  Q +          +  C +   +S ++      G+  EA EL   M    + P  
Sbjct: 631 FFVAMQGD----------FGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMP---LEPDF 677

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLE 683
              ++LL AC   G +++       +LE
Sbjct: 678 VPWMTLLGACKTHGDLEQAKSAARGVLE 705



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 3/149 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A     T+L+  Y+     E S  +F    ++D V+W AMI+A   + C    L  F
Sbjct: 541 GFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFARHGCEAKLL--F 598

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +GI    +TL  ++ + +Q            +    G    +   +  V++ A+ 
Sbjct: 599 QGMALDGIDAKGSTLTSMLVSYSQSGVDAARGFFVAMQGDFGTCPAAEHYSCLVDLLARS 658

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           G +  ++     M    D V W T++  C
Sbjct: 659 GRVGEAKELVDSMPLEPDFVPWMTLLGAC 687


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 187/628 (29%), Positives = 311/628 (49%), Gaps = 36/628 (5%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           AC G L   + +H   + L       +     L+S Y+  GD+ +A     G    D  +
Sbjct: 30  AC-GTLRSLRALHGRLLLLTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRPDAYA 88

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL-ISLCADSLLLREGRSVHGY 303
           +  ++      G   +A  L  +M+           V++L +  C  S   R GR +H  
Sbjct: 89  YRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVVLSLALKACVRSADFRYGRRLHCD 148

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            ++   G D  +MNSL+D Y+K+  L  A  +F+ + P  ++VSW SM+SG         
Sbjct: 149 VVK-AGGADGFVMNSLVDMYAKAGDLENARKVFDRV-PERNVVSWTSMLSGSIQNGIAEE 206

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF EM       S  T++++L +C     L  G+ IH   +K G S N+    +L+ 
Sbjct: 207 GLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLD 266

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  +  A  +   +    D   W  +IV  TQN    +A++ F    +  +  P+S
Sbjct: 267 MYAKCEKVEDARRVFDELEF-VDIVLWTAMIVGYTQNKRPLDALQLFLH-KKFVSIVPNS 324

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT+  VISA   L     G+S+H + +K        V+NAL+ MY +C+ +  A+++F  
Sbjct: 325 VTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGR 384

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               ++  WN M++ +S+N     +L LF  +  +   P+ IS+V+ LSAC  L  L  G
Sbjct: 385 ILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIG 444

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K  H +     F  N ++++ALL++YS C               +++  WS+MI  YG  
Sbjct: 445 KGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQ 504

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G    +I+LF+EM    I P +    S+LSACSH+G+V  G +Y+++M   +++ P  +H
Sbjct: 505 GDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKH 564

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD++ R+G L+EA EFI+N+PI+    VWG+ L  C  H   + G++  + +  L 
Sbjct: 565 YACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALH 624

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           PE   +Y+ +SN+Y + GRW  +  I +
Sbjct: 625 PETPDFYVLMSNLYTSYGRWDKSQTIRR 652



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 238/491 (48%), Gaps = 26/491 (5%)

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW---SGEQADN 174
           YA  GDL S+     G    D  ++  ++   +        +   R+M     +  QAD 
Sbjct: 65  YAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQAD- 123

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           V LS A+ A     +  YG+ +H   +K G  D     V NSL+ MY++ GD+E A + F
Sbjct: 124 VVLSLALKACVRSADFRYGRRLHCDVVKAGGADG---FVMNSLVDMYAKAGDLENARKVF 180

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +  ++VVSW +++ G   NG  EE   L +EM+   +V P   T+V++++ CA    L
Sbjct: 181 DRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR-QDNVHPSEYTMVSVLAACAMLGGL 239

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +GR +HG  I+  L  +  +  SL+D Y+K   +  A  +F+ +    D+V W +MI G
Sbjct: 240 HQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELE-FVDIVLWTAMIVG 298

Query: 355 LFKE-------MLYLCSQF-----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
             +         L+L  +F     +  T+  ++ +      L  G+S+H   +KLG   +
Sbjct: 299 YTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMES 358

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            +  NAL+ MY  C  L  A S+  RI    D   WN ++   ++NG   E++  F  M 
Sbjct: 359 DVVRNALVDMYAKCQALPEANSIFGRIL-IKDVVAWNSMMAGYSENGMANESLVLFNRM- 416

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           + Q  SPD++++VN +SAC  L     GK  H  A+K     +  V  AL+ +Y +C D+
Sbjct: 417 RMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADL 476

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
            SA  VF    + N  TW+ MI  +        +++LF  +      PNE+   SILSAC
Sbjct: 477 PSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSAC 536

Query: 580 TQLGVLRHGKQ 590
           +  G++  GK+
Sbjct: 537 SHTGMVTAGKE 547



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 224/478 (46%), Gaps = 17/478 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+     E++  +F     ++VV+W +M++  ++N     GL  F EM ++ +  
Sbjct: 162 SLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHP 221

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T++ +++A   +  L QGR +H   IK G+  +S +    ++MYAKC  +  +   F
Sbjct: 222 SEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVF 281

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V W  ++ G   N  P   L  F    +     ++V++++ ++ASA L  L 
Sbjct: 282 DELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLP 341

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA+G+KLG  +S  V   N+L+ MY++C  +  A   F  +  KDVV+WN+++ G
Sbjct: 342 LGRSVHAIGVKLGTMESDVVR--NALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAG 399

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           ++ NG   E+  L + M+ M+ + PD  +VV  +S C     L  G+  H YAI+     
Sbjct: 400 YSENGMANESLVLFNRMR-MQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS 458

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ +  +L++ YSK   L  A+ +FN +   N  V+W++MI G            LF EM
Sbjct: 459 NIYVNTALLNLYSKCADLPSAQRVFNDMTDRNS-VTWSAMIGGYGMQGDSAGSIDLFNEM 517

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           L      +     +IL +C+    +  GK            + +      ++ +    G+
Sbjct: 518 LKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGN 577

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           L  A   +Q +   +  S W   +  C  +   +   +  K M      +PD   L++
Sbjct: 578 LEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMS 635



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 233/498 (46%), Gaps = 27/498 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T LL+ Y+ +    S+  +   T   D   +  M+   V+       +    +M     R
Sbjct: 59  TKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRR---R 115

Query: 71  FDSTTLLIIVSALTQMNCLKQ-----GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             +     +V +L    C++      GR +HC  +KAG  AD  + N  V+MYAK GDL 
Sbjct: 116 CPAAAQADVVLSLALKACVRSADFRYGRRLHCDVVKAGG-ADGFVMNSLVDMYAKAGDLE 174

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           ++   F  +   + VSW +++SG + N   E+ L+ F EM          ++ S +AA A
Sbjct: 175 NARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACA 234

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            LG L  G+ IH   IK G   + ++S   SL+ MY++C  +E A R F  +   D+V W
Sbjct: 235 MLGGLHQGRWIHGSVIKYGLSTNSFISA--SLLDMYAKCEKVEDARRVFDELEFVDIVLW 292

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I G+  N +  +A  L    + + S+ P+  T+ T+IS  A    L  GRSVH   +
Sbjct: 293 TAMIVGYTQNKRPLDALQLFLHKKFV-SIVPNSVTIATVISASAQLRHLPLGRSVHAIGV 351

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +       ++ N+L+D Y+K  +L +A  +F  I  + D+V+WNSM++G           
Sbjct: 352 KLGTMESDVVRNALVDMYAKCQALPEANSIFGRIL-IKDVVAWNSMMAGYSENGMANESL 410

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF  M          +++  L +C     L  GK  H + +K  F +N     AL+++Y
Sbjct: 411 VLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLY 470

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C DL +A  +   ++ + ++  W+ +I      G    +I  F  M  ++N  P+ V 
Sbjct: 471 SKCADLPSAQRVFNDMT-DRNSVTWSAMIGGYGMQGDSAGSIDLFNEML-KENIHPNEVV 528

Query: 474 LVNVISACGNLELAFEGK 491
             +++SAC +  +   GK
Sbjct: 529 FTSILSACSHTGMVTAGK 546



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 151/289 (52%), Gaps = 3/289 (1%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S SLL  Y+     E +  +F E    D+V W AMI    +N+  +  L  F       I
Sbjct: 261 SASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSI 320

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +S T+  ++SA  Q+  L  GR VH + +K G +    + N  V+MYAKC  L  +  
Sbjct: 321 VPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANS 380

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   D V+WN++M+G   N    + L+ F  M   G   D +S+ +A++A  CL +
Sbjct: 381 IFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLAD 440

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK  H   IK  +  + YV+   +L+++YS+C D+ +A+R F  MT ++ V+W+A+I
Sbjct: 441 LHIGKGFHTYAIKYAFMSNIYVN--TALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMI 498

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            G+ + G    + DL +EM L  ++ P+     +++S C+ + ++  G+
Sbjct: 499 GGYGMQGDSAGSIDLFNEM-LKENIHPNEVVFTSILSACSHTGMVTAGK 546


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 207/693 (29%), Positives = 335/693 (48%), Gaps = 60/693 (8%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG--EQADNVSLSSAVAASACLG 188
           F  +   +  S N  M   LH N P + L  F+        +  D V+L  A++  AC G
Sbjct: 41  FEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTL--ALSFKACRG 98

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           E   G  IH   +  G+     V+V+NSL+ MY + G  E A   F G++C D+VSWN I
Sbjct: 99  EFILGAQIHGFVVATGFVSR--VTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTI 156

Query: 249 IDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLRE-----GRSVH 301
           + GF      E++ D L+    M    V  D  T  T +S C D     +     G  +H
Sbjct: 157 LSGF------EKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLH 210

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              ++   G ++ + N+L+  YS+   L +A  +FN +  + DLVSWN+M+SG       
Sbjct: 211 SLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMT-IRDLVSWNAMLSGYAQEGEC 269

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF  M+         +L   + +C   ++LEFGK IH    KLG+  +    N
Sbjct: 270 YGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCN 329

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L+  Y  C  L  A ++ Q +S  +  S W  +I    +N      +  F +M +    
Sbjct: 330 VLISTYSKCKVLRDAKAVFQDMSARNVVS-WTTLISIDEEN-----VVSLFNAM-RVDGV 382

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+ VT + ++ A     +  EG  +HGL LKS +  +  V N+LITMY +   I+ +  
Sbjct: 383 YPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKK 442

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSA--CTQLG 583
           +FE        +WN +IS ++QN     A   F     E +PN+ +  S+L+A    +  
Sbjct: 443 IFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDI 502

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L+HG++ H H+  LG   + F++ ALLDMY                  K+  +W+ MIS
Sbjct: 503 SLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMIS 562

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           AY  HG     + L+ E+   G      + +S+L+AC   G+VD G   +++M++++ + 
Sbjct: 563 AYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIE 622

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  EH+  +VDMLGR G+L EA E +  +P  P   V  ++L +C  HG+ +M ++V + 
Sbjct: 623 PTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDS 682

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L +++P + G Y+ ++N+Y   G W+   E+ K
Sbjct: 683 LIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRK 715



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 163/614 (26%), Positives = 286/614 (46%), Gaps = 53/614 (8%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G  +H   +  G ++  ++ N  + MY K G    + C F G+ C D VSWNTI+SG   
Sbjct: 103 GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGF-- 160

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE-------LSYGKVIHALGIKLG 204
                  L +   M  +G   D V+ ++A+  S C            +G  +H+L +K G
Sbjct: 161 -EKSVDALNFACFMHLNGVVFDPVTYTTAL--SFCWDRDYWDDHGFLFGLQLHSLVVKCG 217

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE--EAF 262
           +     V + N+L++MYS+ G ++ A R F  MT +D+VSWNA++ G+A  G+    EA 
Sbjct: 218 F--GCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAV 275

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L   M +   +  D  ++   IS C  +  L  G+ +HG A +   G  + + N L+  
Sbjct: 276 LLFGNM-VREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLIST 334

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAIL 375
           YSK   L  A+ +F  ++  N +VSW ++IS        LF  M       +  T + +L
Sbjct: 335 YSKCKVLRDAKAVFQDMSARN-VVSWTTLISIDEENVVSLFNAMRVDGVYPNDVTFIGLL 393

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +      ++ G  +H   LK   S+     N+L+ MY     +  +  + + +++    
Sbjct: 394 HAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTI 453

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT---LVNVISACGNLELAFEGKS 492
           S WN +I    QNG  +EA  TF S  ++    P+  T   ++N I+A  ++ L   G+ 
Sbjct: 454 S-WNALISGYAQNGLCKEAFLTFLSAIKE--IKPNQYTFGSVLNAIAAAEDISLK-HGQR 509

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            H   +K  +  D  V  AL+ MYG+  +I  +  VF         +W  MISA++++  
Sbjct: 510 CHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGD 569

Query: 553 EVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
               + L++ +E E    + I+ +S+L+AC + G++       GH+          I  +
Sbjct: 570 YESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVD-----VGHI----------IFDS 614

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           ++  +S   +   +S M+   G  G+  EA EL H++      P  S + SLL +C   G
Sbjct: 615 MVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGG---PGLSVLQSLLGSCKLHG 671

Query: 670 LVDEGLQYYNNMLE 683
            V+   +  +++++
Sbjct: 672 NVEMAERVVDSLIQ 685



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 138/501 (27%), Positives = 245/501 (48%), Gaps = 36/501 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++ +  S SL+  Y     FE +L +F      D+V+WN +++   ++   V  L+F 
Sbjct: 114 GFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKS---VDALNFA 170

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ-----GRVVHCLSIKAGMIADSSLCNVFVN 116
             M   G+ FD  T    +S     +         G  +H L +K G   +  + N  V 
Sbjct: 171 CFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVT 230

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN--YPEKCLLYFREMGWSGEQADN 174
           MY++ G L+ +   F+ M   D VSWN ++SG       Y  + +L F  M   G   D+
Sbjct: 231 MYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDH 290

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           VSL+ A++A      L +GK IH L  KLGY    +V+V N LIS YS+C  +  A+  F
Sbjct: 291 VSLTGAISACGYTKNLEFGKQIHGLAQKLGY--GTHVAVCNVLISTYSKCKVLRDAKAVF 348

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M+ ++VVSW  +I     +   E    L + M++   V P+  T + L+       ++
Sbjct: 349 QDMSARNVVSWTTLI-----SIDEENVVSLFNAMRV-DGVYPNDVTFIGLLHAITIRNMV 402

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS- 353
           +EG  VHG  ++  L  +  + NSL+  Y+K  S+ +++ +F  +      +SWN++IS 
Sbjct: 403 KEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELN-YQGTISWNALISG 461

Query: 354 ----GLFKE--MLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
               GL KE  + +L +       Q++F ++L  + +     SL+ G+  H   +KLG +
Sbjct: 462 YAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDI-SLKHGQRCHSHLIKLGLN 520

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +     AL+ MY   G++  +  +       +  S W  +I A  ++G ++  +  +K 
Sbjct: 521 TDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFS-WTGMISAYARHGDYESVMSLYKE 579

Query: 461 MTQQQNASPDSVTLVNVISAC 481
           + +++ ++ DS+T ++V++AC
Sbjct: 580 I-EREGSNLDSITFLSVLAAC 599



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 243/524 (46%), Gaps = 33/524 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVM-GLH 59
           GF   +    +L+T YS     + +  +F E   +D+V+WNAM++    E  C  +  + 
Sbjct: 217 GFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVL 276

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            FG MV EG+  D  +L   +SA      L+ G+ +H L+ K G     ++CNV ++ Y+
Sbjct: 277 LFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYS 336

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC  L  ++  F  M   + VSW T++S        E  +  F  M   G   ++V+   
Sbjct: 337 KCKVLRDAKAVFQDMSARNVVSWTTLIS-----IDEENVVSLFNAMRVDGVYPNDVTFIG 391

Query: 180 AVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + A      +  G ++H L +K  L  E     +V+NSLI+MY++   I+ +++ F  +
Sbjct: 392 LLHAITIRNMVKEGLMVHGLCLKSCLSSEQ----NVSNSLITMYAKFESIQESKKIFEEL 447

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLR 295
             +  +SWNA+I G+A NG  +EAF  L  +  ++ ++P+  T  ++++    A+ + L+
Sbjct: 448 NYQGTISWNALISGYAQNGLCKEAF--LTFLSAIKEIKPNQYTFGSVLNAIAAAEDISLK 505

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+  H + I+  L  D  +  +L+D Y K  ++++++ +FN   P     SW  MIS  
Sbjct: 506 HGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNE-TPEKTQFSWTGMISAY 564

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      L+KE+    S     T L++L +C     ++ G  I    +K      T
Sbjct: 565 ARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPT 624

Query: 404 IGVNALM-HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               ++M  M    G L  A  L+ +I      S    ++ +C  +G+ + A +   S+ 
Sbjct: 625 PEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLI 684

Query: 463 QQQNASPDS-VTLVNVISACGNLELAFE-GKSLHGLALKSLMGL 504
           Q    S    V + N+ +  GN E   E  K + G  +K  +G 
Sbjct: 685 QMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGF 728


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 169/469 (36%), Positives = 255/469 (54%), Gaps = 39/469 (8%)

Query: 341 PMNDLVSWNSMISGL-----FKEM------LYLC----SQFSFSTLLAILPSCNSPESLE 385
           P  +LVSW +MISGL     F E       + +C    +QF+FS+ +    +C S  S+E
Sbjct: 2   PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIR---ACASLGSIE 58

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK +HC  LK G  +     + L  MY  CG +  A  + + +    + S W  +I   
Sbjct: 59  MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMIDGY 117

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           ++ G F+EA+  FK M  ++  + D   L + + ACG L+    G+S+H   +K     D
Sbjct: 118 SKIGEFEEALLAFKKMIDEE-VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 176

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELF---R 561
             V NAL  MY +  D++SAS VF     C N+ ++ C+I  + + +   + L +F   R
Sbjct: 177 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
               EPNE +  S++ AC     L  G Q+H  V  + F E+ F+SS L+DMY  C    
Sbjct: 237 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 296

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                       +  AW+S++S +G HG G +AI++F  M + G++P   + ISLL+ CS
Sbjct: 297 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H+GLV+EGL Y+ +M + Y V P  EH+ C++D+LGR+G+L+EA EFI  +P +P    W
Sbjct: 357 HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            + L AC  HGD +MGK  AE L KLEP+N G  + LSN+Y    +W+D
Sbjct: 417 CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWED 465



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 202/453 (44%), Gaps = 46/453 (10%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +++VSW A+I G + N KF EA      M++   V P      + I  CA    +  
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSIEM 59

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
           G+ +H  A++  +G +L + ++L D YSK  ++  A  +F  + P  D VSW +MI G  
Sbjct: 60  GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM-PCKDEVSWTAMIDGYS 118

Query: 356 -----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                      FK+M+          L + L +C + ++ +FG+S+H   +KLGF ++  
Sbjct: 119 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 178

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-----FQEAIKTFK 459
             NAL  MY   GD+ +A ++        D+ C N+V   C  +G+      ++ +  F 
Sbjct: 179 VGNALTDMYSKAGDMESASNVF-----GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 233

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            + ++Q   P+  T  ++I AC N     +G  LH   +K     D  V + L+ MYG+C
Sbjct: 234 EL-RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC 292

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSIL 576
             ++ A   F+   +     WN ++S F Q+     A+++F  +     +PN I+ +S+L
Sbjct: 293 GLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLL 352

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKG 636
           + C+  G++  G              + F S  +   Y        +S +I   G  G+ 
Sbjct: 353 TGCSHAGLVEEGL-------------DYFYS--MDKTYGVVPGEEHYSCVIDLLGRAGRL 397

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
            EA E  + M      P      S L AC   G
Sbjct: 398 KEAKEFINRM---PFEPNAFGWCSFLGACRIHG 427



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 194/429 (45%), Gaps = 18/429 (4%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +++V+W AMI+   +N      +  F  M   G           + A   +  ++ G+ 
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +HCL++K G+ ++  + +   +MY+KCG +  +   F  M C D VSW  ++ G      
Sbjct: 63  MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ LL F++M       D   L S + A   L    +G+ +H+  +KLG+E   +V   
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG-- 180

Query: 215 NSLISMYSQCGDIEAAERAFW-GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           N+L  MYS+ GD+E+A   F     C++VVS+  +IDG+    + E+   +  E++  + 
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR-RQG 239

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +EP+  T  +LI  CA+   L +G  +H   ++     D  + + L+D Y K   L +A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 334 LLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSP 381
             F+ I    + ++WNS++S             +F+ M+    + +  T +++L  C+  
Sbjct: 300 QAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 382 ESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +E G    +      G        + ++ +    G L  A   + R+    +   W  
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418

Query: 441 VIVACTQNG 449
            + AC  +G
Sbjct: 419 FLGACRIHG 427



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 7/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++L   YS       +  +F E   KD V+W AMI    +       L  F
Sbjct: 71  GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 130

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++E +  D   L   + A   +   K GR VH   +K G  +D  + N   +MY+K 
Sbjct: 131 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 190

Query: 122 GDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           GD+ S+   F     C + VS+  ++ G +     EK L  F E+   G + +  + SS 
Sbjct: 191 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A    L  G  +HA  +K+ +++ P+VS  + L+ MY +CG +E A +AF  +   
Sbjct: 251 IKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIGDP 308

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             ++WN+++  F  +G  ++A  +   M + R V+P+  T ++L++ C+ + L+ EG   
Sbjct: 309 TEIAWNSLVSVFGQHGLGKDAIKIFERM-VDRGVKPNAITFISLLTGCSHAGLVEEGLD- 366

Query: 301 HGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           + Y++ +  G        + ++D   ++  L +A+   N +    +   W S +
Sbjct: 367 YFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 214/702 (30%), Positives = 348/702 (49%), Gaps = 63/702 (8%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLG 188
           F  +    TV WNTI+ G + NN P + LL++  M  +      D  + SS + A A   
Sbjct: 62  FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETK 121

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY------SQCGDIEAAERAFWGMTCKDV 242
            L  GK +H   I+   ++S  V V NSL++MY        C + +   + F  M  K+V
Sbjct: 122 NLKAGKAVHCHLIRC-LQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179

Query: 243 VSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           V+WN +I  +   G+  EA   F ++  M+    V+P   + V +    + S  +++   
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRME----VKPSPVSFVNVFPAVSISRSIKKANV 235

Query: 300 VHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
            +G  ++    Y  DL +++S +  Y++   +  +  +F++    N  V WN+MI G++ 
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV-WNTMI-GVYV 293

Query: 358 EMLYLCSQFSF--------------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
           +   L                     T L    + ++ + +E G+  H +  K       
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           + VN+LM MY  CG +  +F +   +    D   WN +I A  QNG   E +     M Q
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLMLVYEM-Q 411

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +Q    D +T+  ++SA  NL     GK  H   ++  +  +  + + LI MY +   I+
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIR 470

Query: 524 SASTVFE-SCY-NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
            +  +FE S Y   +  TWN MIS ++QN    +   +FR +      PN +++ SIL A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C+Q+G +  GKQ+HG        +N F++SAL+DMYS                 +++  +
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++MI  YG HG G  AI LF  M  SGI+P   + +++LSACS+SGL+DEGL+ +  M E
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMG 742
            Y+++P +EH+ CI DMLGR G++ EAYEF+K L  +     +WG++L +C  HG+ ++ 
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710

Query: 743 KQVAELLFKLEPEN--VGYYISLSNMYVALGRWK--DAVEIG 780
           + V+E L K +      GY + LSNMY    +WK  D V  G
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 160/590 (27%), Positives = 273/590 (46%), Gaps = 33/590 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--IRFDSTTLLIIVSALTQM 86
           LF        V WN +I   + N      L F+  M +       D+ T    + A  + 
Sbjct: 61  LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC--------TFSGMHCAD 138
             LK G+ VHC  I+    +   + N  +NMY  C  LN+ +C         F  M   +
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC--LNAPDCFEYDVVRKVFDNMRRKN 178

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            V+WNT++S  +      +    F  M     +   VS  +   A +    +    V + 
Sbjct: 179 VVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYG 238

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
           L +KLG E    + V +S ISMY++ GDIE++ R F     +++  WN +I  +  N   
Sbjct: 239 LMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 298

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
            E+ +L  E    + +  D  T +   S  +    +  GR  HG+  +      ++++NS
Sbjct: 299 VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ-------F 366
           LM  YS+  S+ K+  +F ++    D+VSWN+MIS     GL  E L L  +        
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCGDLVAAFSL 425
            + T+ A+L + ++  + E GK  H + ++ G      G+N+ L+ MY   G +  +  L
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSGLIRISQKL 475

Query: 426 LQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
            +   +   D + WN +I   TQNGH ++    F+ M  +QN  P++VT+ +++ AC  +
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQI 534

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                GK LHG +++  +  +  V +AL+ MY +   IK A  +F      N  T+  MI
Sbjct: 535 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMI 594

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
             + Q+    RA+ LF  ++    +P+ I+ V++LSAC+  G++  G +I
Sbjct: 595 LGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 168/663 (25%), Positives = 277/663 (41%), Gaps = 105/663 (15%)

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +P      S +S   Q G+ + A + F  +     V WN II GF  N       +L HE
Sbjct: 36  TPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICN-------NLPHE 88

Query: 268 MQL----MRSVEP----DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
             L    M+   P    D  T  + +  CA++  L+ G++VH + IR L     ++ NSL
Sbjct: 89  ALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSL 148

Query: 320 MDFY------SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--EMLYLCSQF----- 366
           M+ Y                 +F+ +   N +V+WN++IS   K       C QF     
Sbjct: 149 MNMYVSCLNAPDCFEYDVVRKVFDNMRRKN-VVAWNTLISWYVKTGRNAEACRQFGIMMR 207

Query: 367 -----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDL 419
                S  + + + P+ +   S++     +   LKLG  +  +   V++ + MY   GD+
Sbjct: 208 MEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI 267

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            ++  +        +   WN +I    QN    E+I+ F      +    D VT +   S
Sbjct: 268 ESSRRVFDSCVER-NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAAS 326

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A   L+    G+  HG   K+   L   + N+L+ MY RC  +  +  VF S    ++ +
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN MISAF QN  +   L L   ++   F+ + I++ ++LSA + L     GKQ H  + 
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446

Query: 597 HLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEA 639
             G Q    ++S L+DMYS                   +  A W+SMIS Y  +G   + 
Sbjct: 447 RQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---- 695
             +F +M    IRP   +V S+L ACS  G VD G Q     L  + +R   + +V    
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ-----LHGFSIRQYLDQNVFVAS 560

Query: 696 CIVDMLGRSGKLQEAYEFIKNLP----------------------------------IQP 721
            +VDM  ++G ++ A +                                        I+P
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMYVALGRWKDAVE 778
               + A+LSACS+ G    G ++ E +   + ++P +  +Y  +++M   +GR  +A E
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSS-EHYCCITDMLGRVGRVNEAYE 679

Query: 779 IGK 781
             K
Sbjct: 680 FVK 682



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 202/387 (52%), Gaps = 11/387 (2%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           ++  L   +S ++ Y+ +   ESS  +F     +++  WN MI   V+N C+V  +  F 
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306

Query: 63  EMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           E +  + I  D  T L+  SA++ +  ++ GR  H    K        + N  + MY++C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ S   F  M   D VSWNT++S  + N   ++ L+   EM   G + D +++++ +
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTC 239
           +A++ L     GK  HA  I+ G +   +  + + LI MYS+ G I  +++ F   G   
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAE 483

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D  +WN++I G+  NG  E+ F +  +M L +++ P+  TV +++  C+    +  G+ 
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIGSVDLGKQ 542

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +HG++IR+ L  ++ + ++L+D YSK+ ++  AE +F+     N  V++ +MI G  +  
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS-VTYTTMILGYGQHG 601

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEF 386
           +    + + S  L++  S   P+++ F
Sbjct: 602 M---GERAISLFLSMQESGIKPDAITF 625



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 17/259 (6%)

Query: 13  LLTAYSNVSYFESSLALFYET--CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           L+  YS       S  LF  +    +D  TWN+MI+   +N         F +M+E+ IR
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ T+  I+ A +Q+  +  G+ +H  SI+  +  +  + +  V+MY+K G +  +E  
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS     ++V++ T++ G   +   E+ +  F  M  SG + D ++  + +  SAC    
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVL--SAC---- 632

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNS------LISMYSQCGDIEAAERAFWGMTCKDVVS 244
           SY  +I   G+K+  E     ++  S      +  M  + G +  A     G+  +  ++
Sbjct: 633 SYSGLIDE-GLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIA 691

Query: 245 --WNAIIDGFALNGKFEEA 261
             W +++    L+G+ E A
Sbjct: 692 ELWGSLLGSCKLHGELELA 710


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 193/628 (30%), Positives = 308/628 (49%), Gaps = 43/628 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G +   K +H L +K  +ED   + + N    +YS+C +  AA   F  M  ++V SW  
Sbjct: 132 GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 191

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G   +G F + F    EM L   + PD      +I  C     L  G+ VH   + R
Sbjct: 192 MIVGSTEHGLFFDGFKFFCEM-LNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMR 250

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                + +  SL++ Y+K  S+  +  +FN +   N  VSWN+MISG            L
Sbjct: 251 GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQ-VSWNAMISGCTSNGLHLEAFDL 309

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  M       +  TL+++  +      +  GK +     +LG   N +   AL+ MY  
Sbjct: 310 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 369

Query: 416 CGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASP--DSV 472
           CG L  A S+      N   +  WN +I   +Q+G  QEA++ +  M Q    S      
Sbjct: 370 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 429

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLD---TRVQNALITMYGRCRDIKSASTVF 529
           ++ N I+A  +L+    G+ +HG+ LK   GLD     V NA+   Y +C  ++    VF
Sbjct: 430 SVFNAIAASKSLQF---GRVVHGMVLKC--GLDLMVVSVNNAIADAYSKCGFLEDVRKVF 484

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
           +     ++ +W  +++A+SQ+     AL  F   R   F PN+ +  S+L +C  L  L 
Sbjct: 485 DRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLE 544

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYG 631
           +G+Q+HG +   G      I SAL+DMY+ C S                 +W+++IS Y 
Sbjct: 545 YGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYA 604

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG   +A++LF  M  SGI+    +++ +L ACSH G+V+EGL Y+  M + Y V PE 
Sbjct: 605 QHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEM 664

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ CI+D+LGR G+L +A EFI+ +P++P   VW  +L  C  HG+ ++G+  A  +  
Sbjct: 665 EHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILS 724

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           + PE    Y+ LSN Y+  G ++D + +
Sbjct: 725 IRPEYSATYVLLSNTYIETGSYEDGLSL 752



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 183/707 (25%), Positives = 329/707 (46%), Gaps = 59/707 (8%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF---VNMYAKCGDLNSSECTFS 132
           L+ ++    +   +++ + VH L +K+    D  L  +F    ++Y+KC +  ++   F 
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNF-EDKDLMVLFNHAAHVYSKCSEFRAACGVFD 179

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   +  SW  ++ G   +        +F EM  SG   D  + S+ + +   L  L  
Sbjct: 180 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 239

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK++HA  +  G+  + ++ V+ SL++MY++ G IE +   F  MT  + VSWNA+I G 
Sbjct: 240 GKMVHAQIVMRGF--ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 297

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             NG   EAFDL   M+   +  P++ T+V++       + +  G+ V   A    +  +
Sbjct: 298 TSNGLHLEAFDLFVRMK-NGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 356

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNA-IAPMNDLVSWNSMISGL-----FKEMLYLCSQF 366
           +L+  +L+D YSK  SL  A  +F+           WN+MISG       +E L L  Q 
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 416

Query: 367 -------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGD 418
                     T  ++  +  + +SL+FG+ +H   LK G     + V NA+   Y  CG 
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 476

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L     +  R+    D   W  ++ A +Q+   +EA+ TF  + +++  +P+  T  +V+
Sbjct: 477 LEDVRKVFDRMEER-DIVSWTTLVTAYSQSSLGEEALATF-CLMREEGFAPNQFTFSSVL 534

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCN 536
            +C +L     G+ +HGL  K+  GLDT   +++ALI MY +C  I  A  VF+   N +
Sbjct: 535 ISCASLCFLEYGRQVHGLLCKA--GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPD 592

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W  +IS ++Q+     AL+LFR +E    + N ++++ +L AC+      HG  +  
Sbjct: 593 IVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS------HGGMVEE 646

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +F+  FQ+       + D Y        ++ +I   G  G+  +A+E   +M    + P
Sbjct: 647 GLFY--FQQ-------MEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM---PMEP 694

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYE 712
            +    +LL  C   G V+ G      +L    +RPE +  +V + +    +G  ++   
Sbjct: 695 NEMVWQTLLGGCRVHGNVELGEIAARKIL---SIRPEYSATYVLLSNTYIETGSYEDGLS 751

Query: 713 F---IKNLPIQPKPGVWGAMLSACSHH---GDTKMGKQVAELLFKLE 753
               +K+  ++ +PG     +    H    GD +   Q  E+  KLE
Sbjct: 752 LRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQH-PQKKEIYVKLE 797



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 268/599 (44%), Gaps = 71/599 (11%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS  S F ++  +F E   ++V +W  MI    E+     G  FF EM+  GI  D    
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             I+ +   ++ L+ G++VH   +  G      +    +NMYAK G +  S   F+ M  
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            + VSWN ++SGC  N    +    F  M       +  +L S   A   L +++ GK +
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGFAL 254
                +LG E +  V V  +LI MYS+CG +  A   F    + C     WNA+I G++ 
Sbjct: 345 QNCASELGIEGN--VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           +G  +EA +L  +M     +  D+ T  ++ +  A S  L+ GR VHG  ++   G DL+
Sbjct: 403 SGCSQEALELYVQM-CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK--CGLDLM 459

Query: 315 MM---NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------------LF 356
           ++   N++ D YSK   L     +F+ +    D+VSW ++++                L 
Sbjct: 460 VVSVNNAIADAYSKCGFLEDVRKVFDRMEE-RDIVSWTTLVTAYSQSSLGEEALATFCLM 518

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +E  +  +QF+FS+   +L SC S   LE+G+ +H    K G        +AL+ MY  C
Sbjct: 519 REEGFAPNQFTFSS---VLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKC 575

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  +  +IS N D   W  +I    Q+G  ++A++ F+ M +      ++VTL+ 
Sbjct: 576 GSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVEDALQLFRRM-ELSGIKANAVTLLC 633

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC            HG  ++  +    ++++     YG   +++             
Sbjct: 634 VLFACS-----------HGGMVEEGLFYFQQMEDG----YGVVPEMEH------------ 666

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
              + C+I    +      A+E  R +  EPNE+   ++L  C          ++HG+V
Sbjct: 667 ---YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGC----------RVHGNV 712



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 251/552 (45%), Gaps = 46/552 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  H+  STSLL  Y+ +   E S  +F      + V+WNAMI+ C  N   +     
Sbjct: 250 RGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDL 309

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M       +  TL+ +  A+ ++  +  G+ V   + + G+  +  +    ++MY+K
Sbjct: 310 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 369

Query: 121 CGDLNSSECTFSG--MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           CG L+ +   F    ++C     WN ++SG   +   ++ L  + +M  +G  +D  +  
Sbjct: 370 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 429

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S   A A    L +G+V+H + +K G  D   VSV N++   YS+CG +E   + F  M 
Sbjct: 430 SVFNAIAASKSLQFGRVVHGMVLKCGL-DLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 488

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLRE 296
            +D+VSW  ++  ++ +   EEA   L    LMR     P+  T  +++  CA    L  
Sbjct: 489 ERDIVSWTTLVTAYSQSSLGEEA---LATFCLMREEGFAPNQFTFSSVLISCASLCFLEY 545

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           GR VHG   +  L  +  + ++L+D Y+K  S+++A  +F+ I+   D+VSW ++IS   
Sbjct: 546 GRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN-PDIVSWTAIISGYA 604

Query: 354 --GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
             GL ++ L L  +   S       TLL +L +C+    +E G   +  Q++ G+     
Sbjct: 605 QHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMEDGY----- 658

Query: 405 GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IK 456
           GV   M  Y          G L  A   ++++    +   W  ++  C  +G+ +   I 
Sbjct: 659 GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIA 718

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRVQNALI 513
             K ++ +   S   V L N     G+ E         GL+L+++M   G+      + I
Sbjct: 719 ARKILSIRPEYSATYVLLSNTYIETGSYE--------DGLSLRNVMKDQGVKKEPGYSWI 770

Query: 514 TMYGRCRDIKSA 525
           ++ GR     S 
Sbjct: 771 SVKGRVHKFYSG 782



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 232/501 (46%), Gaps = 46/501 (9%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMM-NSLMDFYSKSNSLSKA 332
           +  +  ++ ++  CA+   +RE ++VHG  ++      DL+++ N     YSK +    A
Sbjct: 115 QTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAA 174

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEML---YLCSQFSFSTLLAILPS 377
             +F+ + P  ++ SW  MI G             F EML    L  +F++S   AI+ S
Sbjct: 175 CGVFDEM-PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS---AIIQS 230

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C   +SLE GK +H   +  GF+ +     +L++MY   G +  ++ +   ++ ++  S 
Sbjct: 231 CIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS- 289

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I  CT NG   EA   F  M +    +P+  TLV+V  A G L     GK +   A
Sbjct: 290 WNAMISGCTSNGLHLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 348

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCT-WNCMISAFSQNKAEVR 555
            +  +  +  V  ALI MY +C  +  A +VF++ + NC + T WN MIS +SQ+     
Sbjct: 349 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQE 408

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALL 611
           ALEL+  +       +  +  S+ +A      L+ G+ +HG V   G       +++A+ 
Sbjct: 409 ALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIA 468

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           D YS C               +   +W+++++AY     G EA+  F  M   G  P + 
Sbjct: 469 DAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQF 528

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  S+L +C+    ++ G Q +  +L +  +  E      ++DM  + G + EA +    
Sbjct: 529 TFSSVLISCASLCFLEYGRQVH-GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDK 587

Query: 717 LPIQPKPGVWGAMLSACSHHG 737
           +   P    W A++S  + HG
Sbjct: 588 IS-NPDIVSWTAIISGYAQHG 607


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 307/604 (50%), Gaps = 42/604 (6%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N LI+MY +C   E+A   F  M  K+ VSW ++I   A N +  +A  L   M L  
Sbjct: 78  LNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSM-LRS 136

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              PD   + + +  CA+   +  GR VH  A++   G DL++ N+L+  YSKS  ++  
Sbjct: 137 GTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADG 196

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEM----LYLCSQFSFSTLLAILP 376
            LLF  +    D +SW S+I+G            +F+EM    ++  ++F F ++ +   
Sbjct: 197 FLLFGRMRE-KDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFS--- 252

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C    SLE+G+ IH   +K    +N+    +L  MY  C  L +A  +   I    D  
Sbjct: 253 ACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGID-APDLV 311

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I AC+  G   EA+     M +     PD +T+  ++ AC   +    G+ +H  
Sbjct: 312 SWNSIINACSVEGLLSEAMVLLSEM-RGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSY 370

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K  +  D  V N+L++MY RC D  SA  VF    + ++ TWN +++A  Q++     
Sbjct: 371 LVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVV 430

Query: 557 LELFRHLEFE-P--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
            +LF  L+   P  + IS+ ++LSA  +LG     KQ+H   F +G   ++ +S+ L+D 
Sbjct: 431 FKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDT 490

Query: 614 YSNCKS-------------NA---AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           Y+ C S             N+   +WSS+I  Y   G   +A++LF  M N G+RP   +
Sbjct: 491 YAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVT 550

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            + +L+ACS  GLVDEG  YY+ M  E+ V P  EH  C++D+L R+G+L EA +F+  +
Sbjct: 551 FVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQM 610

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P +P   +W  +L+    H D +MG++ AE +  ++P +   Y+ L N+Y A G W +  
Sbjct: 611 PFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFA 670

Query: 778 EIGK 781
            + K
Sbjct: 671 RLKK 674



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 248/507 (48%), Gaps = 23/507 (4%)

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
           S    ++ ++ L N  + MY +C    S+   F  M   + VSW ++++    N      
Sbjct: 67  SPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDA 126

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L  F  M  SG   D  +L S V A A LG++  G+ +HA  +K   E+   + V N+L+
Sbjct: 127 LGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMK--SENGSDLIVQNALV 184

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           +MYS+ G +      F  M  KD +SW +II GFA  G   EA  +  EM       P+ 
Sbjct: 185 TMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNE 244

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
               ++ S C     L  G  +H  +++  L ++     SL D Y++   L  A+ +F  
Sbjct: 245 FHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYG 304

Query: 339 I-APMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLE 385
           I AP  DLVSWNS+I+     GL  E + L S+   S       T+  +L +C   ++++
Sbjct: 305 IDAP--DLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQ 362

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+ +H + +KLG   +    N+L+ MY  C D  +A  +    + + D   WN ++ AC
Sbjct: 363 HGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHE-TRDRDVVTWNSILTAC 421

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            Q+ H +   K F ++ Q+   S D ++L NV+SA   L      K +H    K  +  D
Sbjct: 422 VQHQHLEVVFKLF-NLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVND 480

Query: 506 TRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELF---R 561
           T + N LI  Y +C  +  A  +FE    N ++ +W+ +I  ++Q+    +AL+LF   R
Sbjct: 481 TMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMR 540

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHG 588
           +L   PN ++ V +L+AC+++G++  G
Sbjct: 541 NLGVRPNHVTFVGVLTACSRVGLVDEG 567



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 259/549 (47%), Gaps = 20/549 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T Y   +  ES+  +F E   K+ V+W ++I A  +NR     L  F  M+  G   D
Sbjct: 82  LITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPD 141

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L   V A  ++  +  GR VH  ++K+   +D  + N  V MY+K G +      F 
Sbjct: 142 QFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFG 201

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELS 191
            M   D +SW +I++G        + L  FREM   G    N     S  +A   LG L 
Sbjct: 202 RMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLE 261

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG+ IH+L +K   + + Y     SL  MY++C  +E+A+R F+G+   D+VSWN+II+ 
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGC--SLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINA 319

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            ++ G   EA  LL EM+    + PD  TV  L+  C     ++ GR +H Y ++  L  
Sbjct: 320 CSVEGLLSEAMVLLSEMR-GSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDG 378

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
           D+ + NSL+  Y++    S A  +F+      D+V+WNS+++   +          F+ L
Sbjct: 379 DVSVCNSLLSMYARCMDFSSAMDVFHETRD-RDVVTWNSILTACVQHQHLEVVFKLFNLL 437

Query: 372 LAILPSCNS-------PESLEFG-----KSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
              LPS +          S E G     K +H    K+G  N+T+  N L+  Y  CG L
Sbjct: 438 QRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSL 497

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L + +  NSD   W+ +IV   Q+G+ ++A+  F  M +     P+ VT V V++
Sbjct: 498 DDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARM-RNLGVRPNHVTFVGVLT 556

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRC-RDIKSASTVFESCYNCNL 537
           AC  + L  EG   + +       L TR   + +I +  R  R  ++A  V +  +  ++
Sbjct: 557 ACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDI 616

Query: 538 CTWNCMISA 546
             W  +++ 
Sbjct: 617 VMWKTLLAG 625



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 228/518 (44%), Gaps = 29/518 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +L+T YS          LF     KD ++W ++I    +  C +  L  F EMV 
Sbjct: 177 LIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVA 236

Query: 67  EGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           EG+   +      + SA   +  L+ G  +H LS+K  +  +S       +MYA+C  L 
Sbjct: 237 EGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLE 296

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           S++  F G+   D VSWN+I++ C       + ++   EM  SG + D +++   + A  
Sbjct: 297 SAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACV 356

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               + +G+++H+  +KLG +    VSV NSL+SMY++C D  +A   F     +DVV+W
Sbjct: 357 GCDAIQHGRLMHSYLVKLGLDGD--VSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTW 414

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYA 304
           N+I+     +   E  F L + +Q  RS+   D  ++  ++S  A+       + VH   
Sbjct: 415 NSILTACVQHQHLEVVFKLFNLLQ--RSLPSLDRISLNNVLSASAELGYFEMVKQVHTCT 472

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            +  L  D ++ N L+D Y+K  SL  A  LF  +   +D+ SW+S+I G          
Sbjct: 473 FKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKA 532

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-----GFSNNTIGVN 407
             LF  M  L  + +  T + +L +C+    ++ G    C+   +     G        +
Sbjct: 533 LDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEG----CYYYSIMEPEHGVLPTREHCS 588

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQN 466
            ++ +    G L  A   + ++    D   W  ++     +   +   +  + +     +
Sbjct: 589 CVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPS 648

Query: 467 ASPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMG 503
            S   V L N+ SA G+  E A   K++    +K   G
Sbjct: 649 HSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPG 686


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 183/598 (30%), Positives = 295/598 (49%), Gaps = 38/598 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSW-NAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           + L  +Y  CG   +A      M     VS+ N+++  +   G   EA  +   M+    
Sbjct: 49  HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAF-- 106

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
              D  T       CA   L R GR+VH  A+    G D  + N+L+  Y     +  AE
Sbjct: 107 ---DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE 163

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F A+     +VSWN++I+G            +F EM         +T++++LP+C   
Sbjct: 164 AVFGAMR-NRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQA 222

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           + L  G+++H      G  +     NAL+ MY  C  L  A  +     H+ D   W  +
Sbjct: 223 KDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAM 282

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I A   N    EAI     M     A P+ VT+V ++SAC ++      K  H L ++  
Sbjct: 283 IGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLG 342

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  V+ ALI  Y RC  +K      E   +    TWN  +S ++ +  E +A+ELF+
Sbjct: 343 LKSDIAVETALIDAYARCGKMKLMRLTLERG-SWRAETWNAALSGYTVSGREKKAIELFK 401

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            +  E   P+  ++ SIL A  +   L+ GK IH  +  LGF  ++ I++ L+D+YS   
Sbjct: 402 RMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAG 461

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K   AW+++I+ Y  HG    AI L+  M  SG +P   ++ +LL 
Sbjct: 462 DLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLY 521

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+G++DEG++ + +M   + + P  EH+ C+VDMLGR+G+++EA+  I+++P +P  
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPST 581

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VWGA+L AC  H + + G+  A+ LF+L+PEN G Y+ L N+Y A  RW+D  ++ +
Sbjct: 582 SVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRR 639



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 252/534 (47%), Gaps = 42/534 (7%)

Query: 56  MGLHFFGEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
           +G H     V   +R FD  T      A   +   + GR VHC ++ AG   D+ + N  
Sbjct: 90  LGCHREALAVYSAMRAFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNAL 149

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MY  CGD+ ++E  F  M     VSWN +++GC+ N Y E+ L  F EM   G   D 
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            ++ S + A A   +L+ G+ +H L    G  D  YV+V N+LI MY +C  +E A R F
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGD--YVAVKNALIDMYGKCRSLEDARRVF 267

Query: 235 WGMTC---KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
               C   KDVVSW A+I  + LN +  EA  L  +M +  +  P+  T+V L+S CA  
Sbjct: 268 --DHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASM 325

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              +  +  H   IR  L  D+ +  +L+D Y++   +    L     +   +  +WN+ 
Sbjct: 326 PSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE--TWNAA 383

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           +SG            LFK M+    +   +T+ +ILP+      L+ GK+IHC+ L LGF
Sbjct: 384 LSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGF 443

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +T     L+ +Y   GDL AA++L Q +    D   W  +I   + +GH + AI  + 
Sbjct: 444 LRSTEIATGLIDVYSKAGDLDAAWALFQWLPEK-DVVAWTTIIAGYSIHGHARTAILLYD 502

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEG-------KSLHGLALKSLMGLDTRVQNAL 512
            M  +    P++VT+  ++ AC +  +  EG       +++HGL        +    + L
Sbjct: 503 RMV-ESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLM------PNGEHYSCL 555

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFR 561
           + M GR   I+ A  + +   +  +   W  ++ A   +K     EV A  LF+
Sbjct: 556 VDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQ 609



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 44/509 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L++ Y +     ++ A+F    N+ VV+WNA+I  CV+N      L  F
Sbjct: 138 GFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVF 197

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           GEM  +G+  D  T++ ++ A  Q   L  GR VH L    G+    ++ N  ++MY KC
Sbjct: 198 GEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKC 257

Query: 122 GDLNSSECTFSGMHC---ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSL 177
             L  +   F   HC    D VSW  ++   + N+   + +    +M  SG    N V++
Sbjct: 258 RSLEDARRVFD--HCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTM 315

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE----AAERA 233
              ++A A +    + K  HAL I+LG +    ++V  +LI  Y++CG ++      ER 
Sbjct: 316 VYLLSACASMPSGKHAKCTHALCIRLGLKSD--IAVETALIDAYARCGKMKLMRLTLERG 373

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
            W        +WNA + G+ ++G+ ++A +L   M +  SV PD AT+ +++   A+S  
Sbjct: 374 SW-----RAETWNAALSGYTVSGREKKAIELFKRM-IAESVRPDSATMASILPAYAESAD 427

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L+EG+++H + +         +   L+D YSK+  L  A  LF  + P  D+V+W ++I+
Sbjct: 428 LKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWL-PEKDVVAWTTIIA 486

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQ 394
           G            L+  M+    + +  T+  +L +C+    ++ G       +++H   
Sbjct: 487 GYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVH--- 543

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
              G   N    + L+ M    G +  A  L+Q +     TS W  ++ AC  + + +  
Sbjct: 544 ---GLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFG 600

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGN 483
               K + Q    +  S  L+  I A  +
Sbjct: 601 EVAAKRLFQLDPENTGSYVLLGNIYAAAD 629



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 178/402 (44%), Gaps = 61/402 (15%)

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           G++ L  +Y  CG   +A +LL ++      S  N ++ + T  G  +EA+  + +M   
Sbjct: 47  GLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR-- 104

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
              + D +T      AC  L L   G+++H  AL +  G DT VQNALI+MY  C D+ +
Sbjct: 105 ---AFDHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGA 161

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQ 581
           A  VF +  N  + +WN +I+   +N    RALE+F  +  +    +  ++VS+L AC Q
Sbjct: 162 AEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQ 221

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS----------------NAAWSS 625
              L  G+ +H  V   G  +   + +AL+DMY  C+S                  +W++
Sbjct: 222 AKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTA 281

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIR-PTKSSVISLLSACS------------------ 666
           MI AY  + + +EAI L  +M  SG   P   +++ LLSAC+                  
Sbjct: 282 MIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRL 341

Query: 667 --------HSGLVDE-----GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
                    + L+D       ++     LE    R ET +    +     SG+ ++A E 
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETWN--AALSGYTVSGREKKAIEL 399

Query: 714 IKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
            K +    ++P      ++L A +   D K GK +   L  L
Sbjct: 400 FKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTL 441


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 181/602 (30%), Positives = 303/602 (50%), Gaps = 40/602 (6%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR- 272
           TNS +      G++  A + F  M  +D+VSW AII G+      +EA  L   M+++  
Sbjct: 37  TNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDP 96

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           +V PD + V  ++  C  S  +  G S+H YA++  L   + + +SL+D Y +   + K+
Sbjct: 97  AVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKS 156

Query: 333 ELLFNAIAPMNDLVSWNSMISGL-----FKEML----------YLCSQFSFSTLLAILPS 377
             +F+ + P  + V+W ++I+GL     +KE L           L   F+F+  L    +
Sbjct: 157 CRVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIAL---KA 212

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C     +++GK IH   +  GF       N+L  MY  CG++     L + +S   D   
Sbjct: 213 CAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSER-DVVS 271

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W  +IVA  + GH ++A++TF  M   Q   P+  T   + SAC +L     G+ LH   
Sbjct: 272 WTSLIVAYNRIGHEEKAVETFIKMRNSQ-VPPNEQTFATMFSACASLSRLVWGEQLHCNV 330

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
               +     V N+++ MY  C  + SAS +F+     ++ +W+ +I  +SQ      A 
Sbjct: 331 FSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAF 390

Query: 558 ELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           + F   R    +P + ++ S+LS    + VL  G+Q+H   F  G ++NS + S L++MY
Sbjct: 391 KYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMY 450

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C                   + ++MI+ Y  HGK  EAI+LF +    G  P   + I
Sbjct: 451 SKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFI 510

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+L+AC+HSG +D G  Y+N M E+Y++RP  EH+ C+VD+L R+G+L EA + I  +  
Sbjct: 511 SVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSW 570

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +    VW  +L AC   GD + G++ AE + +L+P      ++L+N+Y + G  ++A  +
Sbjct: 571 KKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANV 630

Query: 780 GK 781
            K
Sbjct: 631 RK 632



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 229/499 (45%), Gaps = 18/499 (3%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            L+ +   +SLL  Y  V   E S  +F E   ++ VTW A+IT  V       GL +F 
Sbjct: 133 LLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 192

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM       D+ T  I + A   +  +K G+ +H   I  G  A   + N    MY +CG
Sbjct: 193 EMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECG 252

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           ++    C F  M   D VSW +++       + EK +  F +M  S    +  + ++  +
Sbjct: 253 EMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFS 312

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L  L +G+ +H     LG  DS  +SV+NS++ MYS CG +++A   F GM C+D+
Sbjct: 313 ACASLSRLVWGEQLHCNVFSLGLNDS--LSVSNSMMKMYSTCGKLDSASVLFQGMRCRDI 370

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SW+ II G++  G  EEAF     M+       D A + +L+S+  +  +L  GR VH 
Sbjct: 371 ISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFA-LASLLSVSGNMAVLEGGRQVHA 429

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
            A    L  +  + ++L++ YSK  ++ +A  +F      +D+VS  +MI+G        
Sbjct: 430 LAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEE-TDRDDIVSLTAMINGYAEHGKSK 488

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
               LF++ L +       T +++L +C     L+ G    +  Q K            +
Sbjct: 489 EAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCM 548

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +    G L  A  ++  +S   D   W  +++AC   G  +   +  + + +      
Sbjct: 549 VDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCA 608

Query: 470 DS-VTLVNVISACGNLELA 487
            + VTL N+ S+ GNLE A
Sbjct: 609 TALVTLANIYSSTGNLEEA 627



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 242/499 (48%), Gaps = 29/499 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEE 67
           + S L +  N      +  +F +  ++D+V+W A+I   V        +  F  M  V+ 
Sbjct: 37  TNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDP 96

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +  D++ + +++ A  Q + +  G  +H  ++K  +++   + +  ++MY + G +  S
Sbjct: 97  AVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKS 156

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              FS M   + V+W  I++G +H    ++ L YF EM  S E +D  + + A+ A A L
Sbjct: 157 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGL 216

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            ++ YGK IH   I  G++ + +V+  NSL +MY++CG++      F  M+ +DVVSW +
Sbjct: 217 RQVKYGKQIHTHVIVRGFDATVWVA--NSLATMYTECGEMRDGLCLFENMSERDVVSWTS 274

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +   G  E+A +   +M+    V P+  T  T+ S CA    L  G  +H      
Sbjct: 275 LIVAYNRIGHEEKAVETFIKMR-NSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSL 333

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKE 358
            L   L + NS+M  YS    L  A +LF  +    D++SW+++I G          FK 
Sbjct: 334 GLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMR-CRDIISWSTIIGGYSQAGFGEEAFKY 392

Query: 359 MLYL------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             ++       + F+ ++LL++     +   LE G+ +H      G   N+   + L++M
Sbjct: 393 FSWMRQSGPKPTDFALASLLSV---SGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINM 449

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG++  A  + +    + D      +I    ++G  +EAI  F+  + +   SPDSV
Sbjct: 450 YSKCGNIKEASKIFEETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEK-SLKVGFSPDSV 507

Query: 473 TLVNVISAC---GNLELAF 488
           T ++V++AC   G L+L F
Sbjct: 508 TFISVLTACTHSGQLDLGF 526



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 175/358 (48%), Gaps = 14/358 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF A +  + SL T Y+        L LF     +DVV+W ++I A          +  
Sbjct: 232 RGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVET 291

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M    +  +  T   + SA   ++ L  G  +HC     G+    S+ N  + MY+ 
Sbjct: 292 FIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYST 351

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+S+   F GM C D +SW+TI+ G     + E+   YF  M  SG +  + +L+S 
Sbjct: 352 CGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASL 411

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++ S  +  L  G+ +HAL    G E +   +V ++LI+MYS+CG+I+ A + F      
Sbjct: 412 LSVSGNMAVLEGGRQVHALAFCFGLEQNS--TVRSTLINMYSKCGNIKEASKIFEETDRD 469

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VS  A+I+G+A +GK +EA DL  E  L     PD  T +++++ C  S     G+  
Sbjct: 470 DIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFSPDSVTFISVLTACTHS-----GQLD 523

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            G+    L+     M  +      ++D   ++  LS+AE + + ++   D V W +++
Sbjct: 524 LGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLL 581



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 182/431 (42%), Gaps = 56/431 (12%)

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           T   N+ +   IN G+L  A  +  ++ H  D   W  +I       +  EA+  F +M 
Sbjct: 34  TFDTNSHLRSLINAGNLRVARQVFDKMPHR-DIVSWTAIIKGYVTANNSDEAMILFSAMR 92

Query: 463 QQQNA-SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
               A SPD+  +  V+ ACG       G+SLH  A+K+ +     V ++L+ MY R   
Sbjct: 93  VVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGK 152

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
           I+ +  VF      N  TW  +I+           L  F      E   +  +    L A
Sbjct: 153 IEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKA 212

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C  L  +++GKQIH HV   GF    +++++L  MY+ C               +   +W
Sbjct: 213 CAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSW 272

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-SHSGLV----------- 671
           +S+I AY   G   +A+E F +M NS + P + +  ++ SAC S S LV           
Sbjct: 273 TSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFS 332

Query: 672 ---DEGLQYYNNMLEEYDVRPETEHHVC---------------IVDMLGRSGKLQEAYEF 713
              ++ L   N+M++ Y    + +                   I+    ++G  +EA+++
Sbjct: 333 LGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKY 392

Query: 714 IKNLPIQ-PKPGVW--GAMLSACSHHGDTKMGKQVAELL--FKLEPENVGYYISLSNMYV 768
              +    PKP  +   ++LS   +    + G+QV  L   F LE +N     +L NMY 
Sbjct: 393 FSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLE-QNSTVRSTLINMYS 451

Query: 769 ALGRWKDAVEI 779
             G  K+A +I
Sbjct: 452 KCGNIKEASKI 462


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 302/602 (50%), Gaps = 42/602 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N LI+MY +C   ++A + F  M  ++ VSW ++I     NG+  +A  L   M L    
Sbjct: 90  NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSM-LRSGT 148

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             D   + + +  C +   +  GR VH +A++   G DL++ N+L+  YSK+  +    +
Sbjct: 149 AADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFM 208

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS----QFSFSTLLAILPSC 378
           LF  I    DL+SW S+I+G            +F++M+   S    +F F +      +C
Sbjct: 209 LFERIKD-KDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFR---AC 264

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +  S E+G+ IH   +K     +     +L  MY    +L +A     RI    D   W
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIE-APDLVSW 323

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N ++ A +  G   EA+  F  M +     PD +T+  ++ AC   +  + G+ +H   +
Sbjct: 324 NSIVNAYSVEGLLSEALVLFSEM-RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV 382

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K  +  D  V N+L++MY RC D+ SA  VF    + ++ TWN +++A +Q+      L+
Sbjct: 383 KLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLK 442

Query: 559 LFRHL-EFEP--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  L + EP  + IS+ ++LSA  +LG     KQ+H + F  G  ++  +S+ L+D Y+
Sbjct: 443 LFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYA 502

Query: 616 NC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            C                +   +WSS+I  Y   G   EA++LF  M + GIRP   + I
Sbjct: 503 KCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFI 562

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +L+ACS  G V+EG  YY+ M  EY + P  EH  CIVD+L R+GKL EA  FI  +P 
Sbjct: 563 GVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPF 622

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +P   +W  +L+A   H D +MGK+ AE +  ++P +   Y+ L N+Y A G W +   +
Sbjct: 623 EPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARL 682

Query: 780 GK 781
            K
Sbjct: 683 KK 684



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 264/534 (49%), Gaps = 30/534 (5%)

Query: 79  IVSALTQMNCLKQGRVVH-------CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +VSA +++  L QGR VH         S  A +  ++ L N  + MY +C   +S+   F
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW ++++  + N      L  F  M  SG  AD  +L SAV A   LG++ 
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  +K   E    + V N+L++MYS+ G ++     F  +  KD++SW +II G
Sbjct: 170 TGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA  G   EA  +  +M +  S  P+     +    C        G  +HG +I+  L  
Sbjct: 228 FAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
           DL +  SL D Y++  +L  A + F  I AP  DLVSWNS+++     GL  E L L S+
Sbjct: 288 DLYVGCSLSDMYARFKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
              S       T+  +L +C   ++L  G+ IH + +KLG   +    N+L+ MY  C D
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L +A  +   I  + D   WN ++ AC Q+ H +E +K F S+  +   S D ++L NV+
Sbjct: 406 LSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVL 463

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNL 537
           SA   L      K +H  A K+ +  D  + N LI  Y +C  +  A  +FE    N ++
Sbjct: 464 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 523

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
            +W+ +I  ++Q      AL+LF   R L   PN ++ + +L+AC+++G +  G
Sbjct: 524 FSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG 577



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 259/549 (47%), Gaps = 20/549 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T Y   +  +S+  +F E   ++ V+W ++I A V+N      L  F  M+  G   D
Sbjct: 92  LITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAAD 151

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L   V A T++  +  GR VH  ++K+   +D  + N  V MY+K G ++     F 
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFE 211

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELS 191
            +   D +SW +I++G     +  + L  FR+M   G    N     SA  A   +G   
Sbjct: 212 RIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWE 271

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           YG+ IH L IK   +   YV    SL  MY++  ++++A  AF+ +   D+VSWN+I++ 
Sbjct: 272 YGEQIHGLSIKYRLDRDLYVGC--SLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNA 329

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +++ G   EA  L  EM+    + PD  TV  L+  C     L  GR +H Y ++  L  
Sbjct: 330 YSVEGLLSEALVLFSEMR-DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDG 388

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF 366
           D+ + NSL+  Y++ + LS A  +F+ I    D+V+WNS+++   +     E+L L S  
Sbjct: 389 DVSVCNSLLSMYARCSDLSSAMDVFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLL 447

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           + S       +L  +L +       E  K +H +  K G  ++ +  N L+  Y  CG L
Sbjct: 448 NKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSL 507

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L + + +N D   W+ +IV   Q G+ +EA+  F  M +     P+ VT + V++
Sbjct: 508 DDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRM-RSLGIRPNHVTFIGVLT 566

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSASTVFESC-YNCNL 537
           AC  +    EG   + +       + TR   + ++ +  R   +  A+   +   +  ++
Sbjct: 567 ACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDI 626

Query: 538 CTWNCMISA 546
             W  +++A
Sbjct: 627 IMWKTLLAA 635



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL   Y+     +S+   FY     D+V+WN+++ A      +   L  F EM + G+R 
Sbjct: 294 SLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 353

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+  ++ A    + L  GR++H   +K G+  D S+CN  ++MYA+C DL+S+   F
Sbjct: 354 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 413

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V+WN+I++ C  +N+PE+ L  F  +  S    D +SL++ ++ASA LG   
Sbjct: 414 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 473

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
             K +HA   K G  D   +S  N+LI  Y++CG ++ A R F  M   +DV SW+++I 
Sbjct: 474 MVKQVHAYAFKAGLVDDRMLS--NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIV 531

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A  G  +EA DL   M+ +  + P+  T + +++ C+    + EG   + Y+I     
Sbjct: 532 GYAQFGYAKEALDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEG--CYYYSIME-PE 587

Query: 311 YDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           Y ++        ++D  +++  L++A    + +    D++ W ++++
Sbjct: 588 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 634



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 223/503 (44%), Gaps = 40/503 (7%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +L+T YS     +    LF    +KD+++W ++I    +    +  L  F +M+ 
Sbjct: 187 LIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIV 246

Query: 67  EG------IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           EG        F S        A   +   + G  +H LSIK  +  D  +     +MYA+
Sbjct: 247 EGSHHPNEFHFGSA-----FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 301

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             +L+S+   F  +   D VSWN+I++         + L+ F EM  SG + D +++   
Sbjct: 302 FKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 361

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      L +G++IH+  +KLG +    VSV NSL+SMY++C D+ +A   F  +  +
Sbjct: 362 LCACVGRDALYHGRLIHSYLVKLGLDGD--VSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 419

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGR 298
           DVV+WN+I+   A +   EE   L     L+   EP  D  ++  ++S  A+       +
Sbjct: 420 DVVTWNSILTACAQHNHPEEVLKLF---SLLNKSEPSLDRISLNNVLSASAELGYFEMVK 476

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH YA +  L  D ++ N+L+D Y+K  SL  A  LF  +    D+ SW+S+I G    
Sbjct: 477 QVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQF 536

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-----QLKLGFSN 401
                   LF  M  L  + +  T + +L +C+    +  G    C+     + + G   
Sbjct: 537 GYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVP 592

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                + ++ +    G L  A + + ++    D   W  ++ A   +   +   +  + +
Sbjct: 593 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 652

Query: 462 TQ-QQNASPDSVTLVNVISACGN 483
                + S   V L N+ +A GN
Sbjct: 653 LNIDPSHSAAYVLLCNIYAASGN 675


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 230/838 (27%), Positives = 392/838 (46%), Gaps = 77/838 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L  +  L+ +Y+  +  +++  +F     ++ V+W  +I+  V +         
Sbjct: 94  RGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPL 153

Query: 61  FGEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVV--HCLSIKAGMIADSSLCNVFVN 116
           F  M+ EG   R  S T   ++ A       + G  V  H L  K    +++++CN  ++
Sbjct: 154 FRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALIS 213

Query: 117 MYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           MY  C  G    ++  F      D ++WN +MS              FR M     Q D+
Sbjct: 214 MYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM-----QYDD 268

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNS-----------LISM 220
             +           E ++G +I A  +    LG  D  +V V  S           L+S 
Sbjct: 269 SGIELRPT------EHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSA 322

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           +++ G ++ A+  + G+  ++ V+ N +I G       E A ++   M    S   ++ T
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF--MGARDSAAVNVDT 380

Query: 281 VVTLISLCAD----SLLLREGRSVHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELL 335
            V L+S  A+       LR+GR VH + +R    Y  + + N L++ Y+K  ++ KA  +
Sbjct: 381 YVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRV 440

Query: 336 FNAIAPMNDLVSWNSMISGLFKE------MLYLC----SQFSFSTLLAI--LPSCNSPES 383
           F  +    D +SWN++I+ L +       M+  C    +    S   AI  L SC     
Sbjct: 441 FQ-LMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGL 499

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN-IVI 442
           L  G+ +HC  +K G   +T   NAL+ MY  CG +   + +   +S + D   WN I+ 
Sbjct: 500 LAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMG 558

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
           V  +      E+++ F +M  +    P+ VT VN ++A   L +   GK +H + LK  +
Sbjct: 559 VMASSQAPITESVQVFSNM-MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGV 617

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRALE--- 558
             D  V NAL++ Y +  D+ S   +F       +  +WN MIS +  N     A++   
Sbjct: 618 TEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVC 677

Query: 559 LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
           L  H E   +  +   +L+AC  +  L  G ++H        + +  + SAL+DMYS C 
Sbjct: 678 LMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCG 737

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K+  +W+SMIS Y  HG G +A+E+F EM  SG  P   + +S+LS
Sbjct: 738 RIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLS 797

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+GLV+ GL Y+  ++E+Y + P  EH+ C++D+LGR+G+L +  E++K +P++P  
Sbjct: 798 ACSHAGLVERGLDYF-ELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNT 856

Query: 724 GVWGAMLSAC---SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            +W  +L AC    H     +G + + +L +LEP+N   Y+  S  + A+GRW+D  +
Sbjct: 857 LIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAK 914



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 189/724 (26%), Positives = 336/724 (46%), Gaps = 67/724 (9%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K G+  D  L N  VN YAK   L+++   F GM   + VSW  ++SG + +  
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVS 212
           PE     FR M   G      S +      AC   G    G  +   G+    E +   +
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 213 VTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V N+LISMY  C  G    A+R F     +D+++WNA++  +A  G     F L   MQ 
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 271 ------MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
                 +R  E    +++T   L + SL L +   V    ++     DL + ++L+  ++
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVR--VLKSGCSSDLYVGSALVSAFA 324

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLCSQFSFST------- 370
           +   L +A+ ++  +   N  V+ N +I+GL K+        +++ ++ S +        
Sbjct: 325 RHGMLDEAKDIYLGLKERN-AVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV 383

Query: 371 -LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQR 428
            L AI     + + L  G+ +H   L+ G     I V N L++MY  CG +  A  + Q 
Sbjct: 384 LLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ- 442

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +    D   WN +I A  QNG+ + A+  +  + +Q +  P +   ++ +S+C  L L  
Sbjct: 443 LMEARDRISWNTIITALDQNGYCEAAMMNY-CLMRQNSIGPSNFAAISGLSSCAGLGLLA 501

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G+ LH  A+K  + LDT V NAL+ MYG C  +     +F S    ++ +WN ++   +
Sbjct: 502 AGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMA 561

Query: 549 QNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
            ++A +  ++++F ++      PN+++ V+ L+A T L VL  GKQIH  +   G  E++
Sbjct: 562 SSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDN 621

Query: 605 FISSALLDMY----------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            + +AL+  Y                S  +   +W+SMIS Y Y+G   EA++    M +
Sbjct: 622 AVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMH 681

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSG 705
           S       +   +L+AC+    ++ G++ +   L    E DV  E+     +VDM  + G
Sbjct: 682 SEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVES----ALVDMYSKCG 737

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-----PENVGYY 760
           ++  A +   ++  Q     W +M+S  + HG   +G++  E+  +++     P++V + 
Sbjct: 738 RIDYASKVFHSMS-QKNEFSWNSMISGYARHG---LGRKALEIFEEMQESGESPDHVTFV 793

Query: 761 ISLS 764
             LS
Sbjct: 794 SVLS 797



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 204/471 (43%), Gaps = 63/471 (13%)

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           S+H   ++R L +DL + N L++ Y+K   L  A  +F+ + P  + VSW  +ISG    
Sbjct: 86  SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGM-PGRNAVSWTCLISGHVLS 144

Query: 355 --------LFKEMLYL---CSQFSFSTLLAILPSCNS--PESLEFGKSIHCWQLKLGFSN 401
                   LF+ ML     C   SF T  ++L +C    P+ L F   +H    K  F++
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSF-TFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTS 203

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNS---DTSCWNIVIVACTQNGHFQEAIKTF 458
           NT   NAL+ MY +C   V    L QR+   +   D   WN ++    + G        F
Sbjct: 204 NTTVCNALISMYGSCS--VGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLF 261

Query: 459 KSMTQQQNA---SPDSVTLVNVISAC-------GNLELAFEGKSLHGLALKSLMGLDTRV 508
           ++M    +     P   T  ++I+A        G L+  F         LKS    D  V
Sbjct: 262 RAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFV------RVLKSGCSSDLYV 315

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP- 567
            +AL++ + R   +  A  ++      N  T N +I+   + +    A E+F        
Sbjct: 316 GSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA 375

Query: 568 -NEISIVSILSACTQLGV----LRHGKQIHGHVFHLG-FQENSFISSALLDMYSNC---- 617
            N  + V +LSA  +       LR G+++H HV   G       +S+ L++MY+ C    
Sbjct: 376 VNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAID 435

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      +   +W+++I+A   +G    A+  +  M  + I P+  + IS LS+C+
Sbjct: 436 KACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCA 495

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
             GL+  G Q + + + ++ +  +T     +V M G  G++ E +E   ++
Sbjct: 496 GLGLLAAGQQLHCDAV-KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSM 545



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 34/216 (15%)

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           +SLH   +K  +  D  + N L+  Y +   + +A  VF+     N  +W C+IS    +
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 551 KAEVRALELFRHLEFE-----PNEISIVSILSACTQLGVLRHG--KQIHGHVFHLGFQEN 603
                A  LFR +  E     P   +  S+L AC   G  R G   Q+HG V    F  N
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 604 SFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
           + + +AL+ MY +C                 +    W++++S Y   G       LF  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 647 C--NSGI--RPTKSSVISL-----LSACSHSGLVDE 673
              +SGI  RPT+ +  SL     LS+CS  GL+D+
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQ 299


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 325/662 (49%), Gaps = 93/662 (14%)

Query: 209 PYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           P++S   +   +++ Y  CG  + A      +T    V WN +I      G+ + A ++ 
Sbjct: 91  PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 150

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             M L     PD  T+  ++  C +    R G + HG         ++ + N+L+  YS+
Sbjct: 151 CRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 209

Query: 326 SNSLSKAELLFNAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS-- 369
             SL +A ++F+ I    ++D++SWNS++S             LF +M  +  +   +  
Sbjct: 210 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 269

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               +++ ILP+C S +++   K +H   ++ G   +    NAL+  Y  CG +  A  +
Sbjct: 270 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 329

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-------------------- 465
              +    D   WN ++   +Q+G+F+ A + FK+M ++                     
Sbjct: 330 FNMMEFK-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGC 388

Query: 466 --------------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR--- 507
                          + P+ VT+++V+SAC +L    +G  +H  +LK+ L+ LD     
Sbjct: 389 SHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGG 448

Query: 508 ------VQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISAFSQNKAEVRALEL 559
                 V NALI MY +CR  K+A ++F+       N+ TW  MI   +Q      AL+L
Sbjct: 449 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 508

Query: 560 FRHLEFEP-----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLD 612
           F  +  EP     N  +I  IL AC  L  +R GKQIH +V      E+S  F+++ L+D
Sbjct: 509 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLID 568

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               KS  +W+SM++ YG HG+G EA+++F +M  +G  P   +
Sbjct: 569 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 628

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            + +L ACSH G+VD+GL Y+++M  +Y + P  EH+ C +D+L RSG+L +A+  +K++
Sbjct: 629 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDM 688

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   VW A+LSAC  H + ++ +     L ++  EN G Y  +SN+Y   GRWKD  
Sbjct: 689 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 748

Query: 778 EI 779
            I
Sbjct: 749 RI 750



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 170/722 (23%), Positives = 310/722 (42%), Gaps = 125/722 (17%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F++     T ++ +Y      + +L +         V WN +I   ++   +   ++   
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M+  G R D  TL  ++ A  ++   + G   H L    G  ++  +CN  V MY++CG
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW------SGEQAD 173
            L  +   F  +      D +SWN+I+S  + ++     L  F +M        + E++D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
            +S+ + + A   L  +   K +H   I+ G    P V V N+LI  Y++CG +E A + 
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNG--TFPDVFVGNALIDAYAKCGLMENAVKV 329

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ------------------------ 269
           F  M  KDVVSWNA++ G++ +G FE AF+L   M+                        
Sbjct: 330 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 389

Query: 270 -----LMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL---------- 309
                L R +      P+  T+++++S CA      +G  +H Y+++  L          
Sbjct: 390 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 449

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG------------L 355
             DL++ N+L+D YSK  S   A  +F+ I P+ +  +V+W  MI G            L
Sbjct: 450 DEDLMVYNALIDMYSKCRSFKAARSIFDDI-PLEERNVVTWTVMIGGHAQYGDSNDALKL 508

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGVNALM 410
           F EM+   Y  +  ++ T+  IL +C    ++  GK IH + L+     S+     N L+
Sbjct: 509 FVEMISEPYGVAPNAY-TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 567

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CGD+  A  +   +S  S  S W  ++     +G   EA+  F  M ++    PD
Sbjct: 568 DMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKM-RKAGFVPD 625

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            +T + V+ AC +  +  +G S    ++ +  GL  R ++                    
Sbjct: 626 DITFLVVLYACSHCGMVDQGLSYFD-SMSADYGLTPRAEH-------------------- 664

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
                    + C I   +++    +A    + +  EP  +  V++LSAC          +
Sbjct: 665 ---------YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC----------R 705

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +H +V      E++   + L++M  N +++ +++ + + Y   G+  +   + H M  SG
Sbjct: 706 VHSNV---ELAEHAL--NKLVEM--NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 758

Query: 651 IR 652
           I+
Sbjct: 759 IK 760


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 201/681 (29%), Positives = 337/681 (49%), Gaps = 55/681 (8%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFRE--MGWSGEQADNVSLSSAVAASACLGELSYGKV 195
           +  S N  M  CLH+  P + L  F+      S E  D V++  A++  AC GE   G  
Sbjct: 41  NAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTV--ALSLKACQGESKLGCQ 98

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH   +  G+    +V+V+NSL+ MY + G+   A   F  ++  D+VSWN ++ GF   
Sbjct: 99  IHGFAVCSGF--VSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGF--- 153

Query: 256 GKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
              EE+ D L+  + M    +  D  T  + ++ C        G  +H   ++  LG ++
Sbjct: 154 ---EESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEV 210

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------------LFKEM 359
            + N+L+  YS+   L +A  +F+ + P  DLVSWN+MISG              LF  M
Sbjct: 211 FIGNALVTMYSRWGMLDEARRVFDEM-PERDLVSWNAMISGYAQEGKCYGLEAVLLFVNM 269

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +         +L   + +C   ++LE G+ IH    K+G+  +    N LM  Y  C   
Sbjct: 270 VRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVP 329

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A ++ + IS N +   W  +I    +     +A+  F +M +     P+ VT + +I 
Sbjct: 330 KDAKAVFESIS-NRNVVSWTTMISIDEE-----DAVSLFNAM-RVNGVYPNDVTFIGLIH 382

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A     L  EG ++HGL +KS    +  V N+ ITMY +   I+ ++ +FE        +
Sbjct: 383 AVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVS 442

Query: 540 WNCMISAFSQNKAEVRALELFRHL--EFEPNEISIVSILSA--CTQLGVLRHGKQIHGHV 595
           WN +IS ++QN +   AL  +     E +PN+ +  S+L+A    +   L HGK  H H+
Sbjct: 443 WNALISGYAQNGSYKEALLTYLSAVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHL 502

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
             LG   +  +S ALLDMY                  ++  AW+++ISAY  HG     +
Sbjct: 503 LKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVM 562

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            L+ EM   GI P   + +S+L+AC   G+VD G + +++M++++ + P +EH+  +VDM
Sbjct: 563 SLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDM 622

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR G+L EA E +  +P  P   V  ++L +C  HG+ +M ++V   L +++P + G Y
Sbjct: 623 LGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPY 682

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           + ++N+Y   G+W+   E+ +
Sbjct: 683 VLMANLYAEKGKWEKVAEVRR 703



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 171/649 (26%), Positives = 306/649 (47%), Gaps = 58/649 (8%)

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC 149
           K G  +H  ++ +G ++  ++ N  + MY K G+   +   F  +   D VSWNT++SG 
Sbjct: 94  KLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSG- 152

Query: 150 LHNNYPE--KCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIK--L 203
               + E    L + R M + G   D V+ +SA+A   C G+    +G  +H+L +K  L
Sbjct: 153 ----FEESVDALNFARSMHYCGIAFDPVTYTSALA--FCWGDHGFLFGWQLHSLVVKCGL 206

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G E    V + N+L++MYS+ G ++ A R F  M  +D+VSWNA+I G+A  GK      
Sbjct: 207 GCE----VFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEA 262

Query: 264 LLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +L  + ++R  +  D  ++   +S C     L  GR +HG   +   G  + + N LM  
Sbjct: 263 VLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMST 322

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAIL 375
           YSK      A+ +F +I+  N +VSW +MIS        LF  M       +  T + ++
Sbjct: 323 YSKCEVPKDAKAVFESISNRN-VVSWTTMISIDEEDAVSLFNAMRVNGVYPNDVTFIGLI 381

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +      +  G +IH   +K  F +     N+ + MY     +  +  + + ++   +T
Sbjct: 382 HAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELN-CRET 440

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT---LVNVISACGNLELAFEGKS 492
             WN +I    QNG ++EA+ T+ S  ++    P+  T   ++N I+A  ++ L   GKS
Sbjct: 441 VSWNALISGYAQNGSYKEALLTYLSAVKE--IKPNQYTFGSVLNAIAAAEDISLN-HGKS 497

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            H   LK  +G D  V  AL+ MYG+  DI  +  VF          W  +ISA++++  
Sbjct: 498 CHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGD 557

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
               + L+  +E E   P+ I+ +S+L+AC + G++  G ++                 +
Sbjct: 558 FESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVF---------------DS 602

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           ++  +S   ++  +S M+   G  G+  EA EL H++      P  S + SLL +C   G
Sbjct: 603 MVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGG---PGLSVLQSLLGSCRLHG 659

Query: 670 LVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAYEFIKNL 717
            ++   +    ++E   + P +   +V + ++    GK ++  E  + +
Sbjct: 660 NMEMAEKVVGRLIE---MDPASSGPYVLMANLYAEKGKWEKVAEVRRGM 705



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 244/496 (49%), Gaps = 31/496 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++ +  S SL+  Y     F  +L +F    + D+V+WN +++   E+   V  L+F 
Sbjct: 107 GFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEES---VDALNFA 163

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI FD  T    ++     +    G  +H L +K G+  +  + N  V MY++ 
Sbjct: 164 RSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRW 223

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNN--YPEKCLLYFREMGWSGEQADNVSLSS 179
           G L+ +   F  M   D VSWN ++SG       Y  + +L F  M   G   D+VSL+ 
Sbjct: 224 GMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTG 283

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           AV+A   +  L  G+ IH L  K+GY    +VSV N L+S YS+C   + A+  F  ++ 
Sbjct: 284 AVSACGHMKNLELGRQIHGLTQKVGY--GTHVSVCNVLMSTYSKCEVPKDAKAVFESISN 341

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++VVSW  +I     +   E+A  L + M++   V P+  T + LI       L+ EG +
Sbjct: 342 RNVVSWTTMI-----SIDEEDAVSLFNAMRV-NGVYPNDVTFIGLIHAVTIRNLVTEGLT 395

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +HG  I+     +  + NS +  Y+K   + ++  +F  +    + VSWN++ISG     
Sbjct: 396 IHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELN-CRETVSWNALISGYAQNG 454

Query: 356 -FKEML--YLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
            +KE L  YL +       Q++F ++L  + +     SL  GKS H   LKLG   + I 
Sbjct: 455 SYKEALLTYLSAVKEIKPNQYTFGSVLNAIAAAEDI-SLNHGKSCHSHLLKLGLGTDPIV 513

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+ MY   GD++ +  +       +  + W  +I A  ++G F+  +  +  M +++
Sbjct: 514 SGALLDMYGKRGDIIESQRVFNETLERTQFA-WTAIISAYARHGDFESVMSLYTEM-ERE 571

Query: 466 NASPDSVTLVNVISAC 481
             +PDS+T ++V++AC
Sbjct: 572 GINPDSITFLSVLAAC 587



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 241/512 (47%), Gaps = 29/512 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVM-GLHFFGEMVEEGI 69
           +L+T YS     + +  +F E   +D+V+WNAMI+    E +C  +  +  F  MV  G+
Sbjct: 215 ALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGM 274

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  +L   VSA   M  L+ GR +H L+ K G     S+CNV ++ Y+KC     ++ 
Sbjct: 275 LIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKA 334

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   + VSW T++S        E  +  F  M  +G   ++V+    + A      
Sbjct: 335 VFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNL 389

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           ++ G  IH L IK  +      +V+NS I+MY++   I+ + + F  + C++ VSWNA+I
Sbjct: 390 VTEGLTIHGLCIKSCFLSEQ--TVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALI 447

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLREGRSVHGYAIRR 307
            G+A NG ++EA  LL  +  ++ ++P+  T  ++++    A+ + L  G+S H + ++ 
Sbjct: 448 SGYAQNGSYKEA--LLTYLSAVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKL 505

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
            LG D ++  +L+D Y K   + +++ +FN         +W ++IS     G F+ ++ L
Sbjct: 506 GLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQF-AWTAIISAYARHGDFESVMSL 564

Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYI 414
            ++           T L++L +C     ++ G  +    +K       +   + ++ M  
Sbjct: 565 YTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLG 624

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VT 473
             G L  A  L+ +I      S    ++ +C  +G+ + A K    + +   AS    V 
Sbjct: 625 RVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVL 684

Query: 474 LVNVISACGNLELAFE-GKSLHGLALKSLMGL 504
           + N+ +  G  E   E  + + G  +K  +G 
Sbjct: 685 MANLYAEKGKWEKVAEVRRGMRGRGVKKEVGF 716



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 12/341 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  H+     L++ YS     + + A+F    N++VV+W  MI+   E+      +  F
Sbjct: 308 GYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEED-----AVSLF 362

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+  +  T + ++ A+T  N + +G  +H L IK+  +++ ++ N F+ MYAK 
Sbjct: 363 NAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKF 422

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMG-WSGEQADNVSLSS 179
             +  S   F  ++C +TVSWN ++SG   N +Y E  L Y   +      Q    S+ +
Sbjct: 423 ECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKEIKPNQYTFGSVLN 482

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+AA+  +  L++GK  H+  +KLG    P VS   +L+ MY + GDI  ++R F     
Sbjct: 483 AIAAAEDI-SLNHGKSCHSHLLKLGLGTDPIVS--GALLDMYGKRGDIIESQRVFNETLE 539

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +   +W AII  +A +G FE    L  EM+    + PD  T +++++ C    ++  G  
Sbjct: 540 RTQFAWTAIISAYARHGDFESVMSLYTEME-REGINPDSITFLSVLAACCRKGMVDAGHR 598

Query: 300 VHGYAIRRLLGYDLLMMNSLM-DFYSKSNSLSKAELLFNAI 339
           V    +++          S+M D   +   L +AE L + I
Sbjct: 599 VFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQI 639


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 193/628 (30%), Positives = 308/628 (49%), Gaps = 43/628 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G +   K +H L +K  +ED   + + N    +YS+C +  AA   F  M  ++V SW  
Sbjct: 78  GSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTV 137

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G   +G F + F    EM L   + PD      +I  C     L  G+ VH   + R
Sbjct: 138 MIVGSTEHGLFFDGFKFFCEM-LNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMR 196

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                + +  SL++ Y+K  S+  +  +FN +   N  VSWN+MISG            L
Sbjct: 197 GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQ-VSWNAMISGCTSNGLHLEAFDL 255

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  M       +  TL+++  +      +  GK +     +LG   N +   AL+ MY  
Sbjct: 256 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 315

Query: 416 CGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASP--DSV 472
           CG L  A S+      N   +  WN +I   +Q+G  QEA++ +  M Q    S      
Sbjct: 316 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 375

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLD---TRVQNALITMYGRCRDIKSASTVF 529
           ++ N I+A  +L+    G+ +HG+ LK   GLD     V NA+   Y +C  ++    VF
Sbjct: 376 SVFNAIAASKSLQF---GRVVHGMVLKC--GLDLMVVSVNNAIADAYSKCGFLEDVRKVF 430

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
           +     ++ +W  +++A+SQ+     AL  F   R   F PN+ +  S+L +C  L  L 
Sbjct: 431 DRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLE 490

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYG 631
           +G+Q+HG +   G      I SAL+DMY+ C S                 +W+++IS Y 
Sbjct: 491 YGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYA 550

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG   +A++LF  M  SGI+    +++ +L ACSH G+V+EGL Y+  M + Y V PE 
Sbjct: 551 QHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEM 610

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ CI+D+LGR G+L +A EFI+ +P++P   VW  +L  C  HG+ ++G+  A  +  
Sbjct: 611 EHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILS 670

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           + PE    Y+ LSN Y+  G ++D + +
Sbjct: 671 IRPEYSATYVLLSNTYIETGSYEDGLSL 698



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 183/707 (25%), Positives = 329/707 (46%), Gaps = 59/707 (8%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF---VNMYAKCGDLNSSECTFS 132
           L+ ++    +   +++ + VH L +K+    D  L  +F    ++Y+KC +  ++   F 
Sbjct: 67  LIDVLRDCAEKGSIREAKAVHGLVLKSN-FEDKDLMVLFNHAAHVYSKCSEFRAACGVFD 125

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   +  SW  ++ G   +        +F EM  SG   D  + S+ + +   L  L  
Sbjct: 126 EMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 185

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK++HA  +  G+  + ++ V+ SL++MY++ G IE +   F  MT  + VSWNA+I G 
Sbjct: 186 GKMVHAQIVMRGF--ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 243

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             NG   EAFDL   M+   +  P++ T+V++       + +  G+ V   A    +  +
Sbjct: 244 TSNGLHLEAFDLFVRMK-NGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 302

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNA-IAPMNDLVSWNSMISGL-----FKEMLYLCSQF 366
           +L+  +L+D YSK  SL  A  +F+           WN+MISG       +E L L  Q 
Sbjct: 303 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 362

Query: 367 -------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGD 418
                     T  ++  +  + +SL+FG+ +H   LK G     + V NA+   Y  CG 
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 422

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L     +  R+    D   W  ++ A +Q+   +EA+ TF  + +++  +P+  T  +V+
Sbjct: 423 LEDVRKVFDRMEER-DIVSWTTLVTAYSQSSLGEEALATF-CLMREEGFAPNQFTFSSVL 480

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCN 536
            +C +L     G+ +HGL  K+  GLDT   +++ALI MY +C  I  A  VF+   N +
Sbjct: 481 ISCASLCFLEYGRQVHGLLCKA--GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPD 538

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W  +IS ++Q+     AL+LFR +E    + N ++++ +L AC+      HG  +  
Sbjct: 539 IVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS------HGGMVEE 592

Query: 594 HVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            +F+  FQ+       + D Y        ++ +I   G  G+  +A+E   +M    + P
Sbjct: 593 GLFY--FQQ-------MEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM---PMEP 640

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYE 712
            +    +LL  C   G V+ G      +L    +RPE +  +V + +    +G  ++   
Sbjct: 641 NEMVWQTLLGGCRVHGNVELGEIAARKIL---SIRPEYSATYVLLSNTYIETGSYEDGLS 697

Query: 713 F---IKNLPIQPKPGVWGAMLSACSHH---GDTKMGKQVAELLFKLE 753
               +K+  ++ +PG     +    H    GD +   Q  E+  KLE
Sbjct: 698 LRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQH-PQKKEIYVKLE 743



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 268/599 (44%), Gaps = 71/599 (11%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS  S F ++  +F E   ++V +W  MI    E+     G  FF EM+  GI  D    
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             I+ +   ++ L+ G++VH   +  G      +    +NMYAK G +  S   F+ M  
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            + VSWN ++SGC  N    +    F  M       +  +L S   A   L +++ GK +
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAIIDGFAL 254
                +LG E +  V V  +LI MYS+CG +  A   F    + C     WNA+I G++ 
Sbjct: 291 QNCASELGIEGN--VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           +G  +EA +L  +M     +  D+ T  ++ +  A S  L+ GR VHG  ++   G DL+
Sbjct: 349 SGCSQEALELYVQM-CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK--CGLDLM 405

Query: 315 MM---NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------------LF 356
           ++   N++ D YSK   L     +F+ +    D+VSW ++++                L 
Sbjct: 406 VVSVNNAIADAYSKCGFLEDVRKVFDRMEE-RDIVSWTTLVTAYSQSSLGEEALATFCLM 464

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +E  +  +QF+FS+   +L SC S   LE+G+ +H    K G        +AL+ MY  C
Sbjct: 465 REEGFAPNQFTFSS---VLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKC 521

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  +  +IS N D   W  +I    Q+G  ++A++ F+ M +      ++VTL+ 
Sbjct: 522 GSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVEDALQLFRRM-ELSGIKANAVTLLC 579

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC            HG  ++  +    ++++     YG   +++             
Sbjct: 580 VLFACS-----------HGGMVEEGLFYFQQMEDG----YGVVPEMEH------------ 612

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
              + C+I    +      A+E  R +  EPNE+   ++L  C          ++HG+V
Sbjct: 613 ---YACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGC----------RVHGNV 658



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 251/552 (45%), Gaps = 46/552 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  H+  STSLL  Y+ +   E S  +F      + V+WNAMI+ C  N   +     
Sbjct: 196 RGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDL 255

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M       +  TL+ +  A+ ++  +  G+ V   + + G+  +  +    ++MY+K
Sbjct: 256 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 315

Query: 121 CGDLNSSECTFSG--MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           CG L+ +   F    ++C     WN ++SG   +   ++ L  + +M  +G  +D  +  
Sbjct: 316 CGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYC 375

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S   A A    L +G+V+H + +K G  D   VSV N++   YS+CG +E   + F  M 
Sbjct: 376 SVFNAIAASKSLQFGRVVHGMVLKCGL-DLMVVSVNNAIADAYSKCGFLEDVRKVFDRME 434

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLRE 296
            +D+VSW  ++  ++ +   EEA   L    LMR     P+  T  +++  CA    L  
Sbjct: 435 ERDIVSWTTLVTAYSQSSLGEEA---LATFCLMREEGFAPNQFTFSSVLISCASLCFLEY 491

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           GR VHG   +  L  +  + ++L+D Y+K  S+++A  +F+ I+   D+VSW ++IS   
Sbjct: 492 GRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN-PDIVSWTAIISGYA 550

Query: 354 --GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
             GL ++ L L  +   S       TLL +L +C+    +E G   +  Q++ G+     
Sbjct: 551 QHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGL-FYFQQMEDGY----- 604

Query: 405 GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IK 456
           GV   M  Y          G L  A   ++++    +   W  ++  C  +G+ +   I 
Sbjct: 605 GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIA 664

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRVQNALI 513
             K ++ +   S   V L N     G+ E         GL+L+++M   G+      + I
Sbjct: 665 ARKILSIRPEYSATYVLLSNTYIETGSYE--------DGLSLRNVMKDQGVKKEPGYSWI 716

Query: 514 TMYGRCRDIKSA 525
           ++ GR     S 
Sbjct: 717 SVKGRVHKFYSG 728



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 232/501 (46%), Gaps = 46/501 (9%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMM-NSLMDFYSKSNSLSKA 332
           +  +  ++ ++  CA+   +RE ++VHG  ++      DL+++ N     YSK +    A
Sbjct: 61  QTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAA 120

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEML---YLCSQFSFSTLLAILPS 377
             +F+ + P  ++ SW  MI G             F EML    L  +F++S   AI+ S
Sbjct: 121 CGVFDEM-PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS---AIIQS 176

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C   +SLE GK +H   +  GF+ +     +L++MY   G +  ++ +   ++ ++  S 
Sbjct: 177 CIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVS- 235

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I  CT NG   EA   F  M +    +P+  TLV+V  A G L     GK +   A
Sbjct: 236 WNAMISGCTSNGLHLEAFDLFVRM-KNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCA 294

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCT-WNCMISAFSQNKAEVR 555
            +  +  +  V  ALI MY +C  +  A +VF++ + NC + T WN MIS +SQ+     
Sbjct: 295 SELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQE 354

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISSALL 611
           ALEL+  +       +  +  S+ +A      L+ G+ +HG V   G       +++A+ 
Sbjct: 355 ALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIA 414

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           D YS C               +   +W+++++AY     G EA+  F  M   G  P + 
Sbjct: 415 DAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQF 474

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  S+L +C+    ++ G Q +  +L +  +  E      ++DM  + G + EA +    
Sbjct: 475 TFSSVLISCASLCFLEYGRQVH-GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDK 533

Query: 717 LPIQPKPGVWGAMLSACSHHG 737
           +   P    W A++S  + HG
Sbjct: 534 IS-NPDIVSWTAIISGYAQHG 553


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 195/662 (29%), Positives = 327/662 (49%), Gaps = 40/662 (6%)

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N+  ++ L  F  +  SG   D  SLS  +    CL +   GK +H   IK G+ +   
Sbjct: 69  RNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED-- 126

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           VSV  SL+ MY +   +E  ER F  M  K+VVSW +++ G+  NG  E+A  L  +MQL
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              ++P+  T   ++   A    + +G  VH   I+  L   + + NS+++ YSKS  +S
Sbjct: 187 -EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
            A+ +F+++   N  VSWNSMI+G            LF  M     + + +    ++  C
Sbjct: 246 DAKAVFDSMENRN-AVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLC 304

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            + + + F K +HC  +K G   +     ALM  Y  C ++  AF L   +    +   W
Sbjct: 305 ANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSW 364

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
             +I    QNG    A+  F  M +++   P+  T   +++A      A     +H L +
Sbjct: 365 TAIISGYVQNGRTDRAMNLFCQM-RREGVRPNHFTYSTILTA----NAAVSPSQIHALVV 419

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K+       V  AL   Y +  D   A+ +FE     ++  W+ M+S ++Q      A++
Sbjct: 420 KTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVK 479

Query: 559 LFRHLE---FEPNEISIVSILSACT-QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +F  L     EPNE +  S+L+AC      +  GKQ H      GF     +SSAL+ MY
Sbjct: 480 IFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMY 539

Query: 615 S---NCKSN------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           +   N +S              +W+SMIS Y  HG G +++++F EM +  +     + I
Sbjct: 540 AKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFI 599

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            ++SAC+H+GLV+EG +Y++ M+++Y + P  EH+ C+VD+  R+G L++A + I  +P 
Sbjct: 600 GVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPF 659

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
                +W  +L+AC  H + ++G+  AE L  L+P++   Y+ LSN+Y   G W++  ++
Sbjct: 660 PAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKV 719

Query: 780 GK 781
            K
Sbjct: 720 RK 721



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 175/664 (26%), Positives = 308/664 (46%), Gaps = 59/664 (8%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ 85
           S  LF ET  + +   N ++     N      L+ F  +   G   D ++L  ++     
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +     G+ VHC  IK G + D S+    V+MY K   +   E  F  M   + VSW ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           ++G   N   E+ L  F +M   G + +  + ++ +   A  G +  G  +H + IK G 
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           + + +V   NS+++MYS+   +  A+  F  M  ++ VSWN++I GF  NG   EAF+L 
Sbjct: 225 DSTIFVG--NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELF 282

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           + M+L   V+       T+I LCA+   +   + +H   I+    +DL +  +LM  YSK
Sbjct: 283 YRMRL-EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLF------KEMLYLC---------SQFSFST 370
            + +  A  LF  +  + ++VSW ++ISG        + M   C         + F++ST
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401

Query: 371 LL----AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +L    A+ PS            IH   +K  + N+     AL   Y   GD   A  + 
Sbjct: 402 ILTANAAVSPS-----------QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF 450

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           + I    D   W+ ++    Q G  + A+K F  +  ++   P+  T  +V++AC     
Sbjct: 451 ELIDEK-DIVAWSAMLSGYAQMGDIEGAVKIFLQLA-KEGVEPNEFTFSSVLNACAAPTA 508

Query: 487 AFE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           + E GK  H  ++KS       V +AL+TMY +  +I+SA+ VF+   + +L +WN MIS
Sbjct: 509 SVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMIS 568

Query: 546 AFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            ++Q+    ++L++F   R    E + I+ + ++SACT  G++  G++     F L    
Sbjct: 569 GYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQR----YFDL---- 620

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV-ISL 661
                  ++  Y    +   +S M+  Y   G   +A++L ++M      P  +++  +L
Sbjct: 621 -------MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMP----FPAGATIWRTL 669

Query: 662 LSAC 665
           L+AC
Sbjct: 670 LAAC 673



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 158/612 (25%), Positives = 281/612 (45%), Gaps = 65/612 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+  +   TSL+  Y      E    +F E   K+VV+W +++    +N      L  F
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EGI+ +  T   ++  L     +++G  VH + IK+G+ +   + N  VNMY+K 
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKS 241

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ ++  F  M   + VSWN++++G + N    +    F  M   G +      ++ +
Sbjct: 242 LMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCK 240
              A + E+S+ K +H   IK G +    +++  +L+  YS+C +I+ A + F  M   +
Sbjct: 302 KLCANIKEMSFAKQLHCQVIKNGSDFD--LNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ 359

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW AII G+  NG+ + A +L  +M+    V P+  T  T+++  A          +
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMR-REGVRPNHFTYSTILTANAAV----SPSQI 414

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H   ++        +  +L D YSK    ++A  +F  I    D+V+W++M+SG      
Sbjct: 415 HALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDE-KDIVAWSAMLSGYAQMGD 473

Query: 356 ----FKEMLYLC------SQFSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSNNTI 404
                K  L L       ++F+FS+   +L +C +P  S+E GK  H   +K GFSN   
Sbjct: 474 IEGAVKIFLQLAKEGVEPNEFTFSS---VLNACAAPTASVEQGKQFHSCSIKSGFSNALC 530

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +AL+ MY   G++ +A  + +R   + D   WN +I    Q+G  ++++K F+ M + 
Sbjct: 531 VSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEM-RS 588

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +N   D +T + VISAC +  L  EG+    L +K    + T                  
Sbjct: 589 KNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPT------------------ 630

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC----- 579
                       +  ++CM+  +S+     +A++L   + F        ++L+AC     
Sbjct: 631 ------------MEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 678

Query: 580 TQLGVLRHGKQI 591
            QLG L   K I
Sbjct: 679 VQLGELAAEKLI 690


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 325/662 (49%), Gaps = 93/662 (14%)

Query: 209 PYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           P++S   +   +++ Y  CG  + A      +T    V WN +I      G+ + A ++ 
Sbjct: 84  PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 143

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             M L     PD  T+  ++  C +    R G + HG         ++ + N+L+  YS+
Sbjct: 144 CRM-LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 202

Query: 326 SNSLSKAELLFNAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS-- 369
             SL +A ++F+ I    ++D++SWNS++S             LF +M  +  +   +  
Sbjct: 203 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 262

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               +++ ILP+C S +++   K +H   ++ G   +    NAL+  Y  CG +  A  +
Sbjct: 263 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKV 322

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-------------------- 465
              +    D   WN ++   +Q+G+F+ A + FK+M ++                     
Sbjct: 323 FNMMEFK-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGC 381

Query: 466 --------------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR--- 507
                          + P+ VT+++V+SAC +L    +G  +H  +LK+ L+ LD     
Sbjct: 382 SHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGG 441

Query: 508 ------VQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISAFSQNKAEVRALEL 559
                 V NALI MY +CR  K+A ++F+       N+ TW  MI   +Q      AL+L
Sbjct: 442 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 501

Query: 560 FRHLEFEP-----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLD 612
           F  +  EP     N  +I  IL AC  L  +R GKQIH +V      E+S  F+++ L+D
Sbjct: 502 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLID 561

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               KS  +W+SM++ YG HG+G EA+++F +M  +G  P   +
Sbjct: 562 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 621

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            + +L ACSH G+VD+GL Y+++M  +Y + P  EH+ C +D+L RSG+L +A+  +K++
Sbjct: 622 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDM 681

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   VW A+LSAC  H + ++ +     L ++  EN G Y  +SN+Y   GRWKD  
Sbjct: 682 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 741

Query: 778 EI 779
            I
Sbjct: 742 RI 743



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 170/722 (23%), Positives = 310/722 (42%), Gaps = 125/722 (17%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F++     T ++ +Y      + +L +         V WN +I   ++   +   ++   
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M+  G R D  TL  ++ A  ++   + G   H L    G  ++  +CN  V MY++CG
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW------SGEQAD 173
            L  +   F  +      D +SWN+I+S  + ++     L  F +M        + E++D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
            +S+ + + A   L  +   K +H   I+ G    P V V N+LI  Y++CG +E A + 
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNG--TFPDVFVGNALIDAYAKCGLMENAVKV 322

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ------------------------ 269
           F  M  KDVVSWNA++ G++ +G FE AF+L   M+                        
Sbjct: 323 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 382

Query: 270 -----LMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL---------- 309
                L R +      P+  T+++++S CA      +G  +H Y+++  L          
Sbjct: 383 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 442

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG------------L 355
             DL++ N+L+D YSK  S   A  +F+ I P+ +  +V+W  MI G            L
Sbjct: 443 DEDLMVYNALIDMYSKCRSFKAARSIFDDI-PLEERNVVTWTVMIGGHAQYGDSNDALKL 501

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIGVNALM 410
           F EM+   Y  +  ++ T+  IL +C    ++  GK IH + L+     S+     N L+
Sbjct: 502 FVEMISEPYGVAPNAY-TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLI 560

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CGD+  A  +   +S  S  S W  ++     +G   EA+  F  M ++    PD
Sbjct: 561 DMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKM-RKAGFVPD 618

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
            +T + V+ AC +  +  +G S    ++ +  GL  R ++                    
Sbjct: 619 DITFLVVLYACSHCGMVDQGLSYFD-SMSADYGLTPRAEH-------------------- 657

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
                    + C I   +++    +A    + +  EP  +  V++LSAC          +
Sbjct: 658 ---------YACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSAC----------R 698

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +H +V      E++   + L++M  N +++ +++ + + Y   G+  +   + H M  SG
Sbjct: 699 VHSNV---ELAEHAL--NKLVEM--NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 751

Query: 651 IR 652
           I+
Sbjct: 752 IK 753


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 198/648 (30%), Positives = 333/648 (51%), Gaps = 46/648 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+V+ SS + +         GK++HA  I+  +E  P   + NSLIS+YS+ GD+  A+ 
Sbjct: 61  DSVTFSSLLKSCIRARHFRLGKLVHARLIE--FEIEPDSVLYNSLISLYSKSGDLTKAKD 118

Query: 233 AFWGMT---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            F  M     +DVVSW+A++  F  NG+  +A  L  E   M  V P+      +I  C+
Sbjct: 119 VFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLV-PNDYCYTAVIRACS 177

Query: 290 DSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVS 347
           +S  +  GR + G+ ++      D+ +  SL+D + K  NS   A  +F+ ++ +N +V+
Sbjct: 178 NSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-VVT 236

Query: 348 WNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL 395
           W  MI+     G  +E +        S       TL ++  +C   E+L  G+ +H W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAI 296

Query: 396 KLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF- 451
           + G +++     +L+ MY  C   G +     +  R+  +S  S W  +I    QN +  
Sbjct: 297 RSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMS-WTALITGYMQNCNLA 353

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EAI  F  M  Q +  P+  T  +   ACGN+     GK + G A K  +  ++ V N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNS 413

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
           +I+M+ +C  ++ A T FES    NL ++N  +    +N     A EL   +   E   +
Sbjct: 414 VISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVS 473

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +  S+LS    +G LR G+QIH  V  LG   N  + +AL+ MYS C           
Sbjct: 474 AFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFS 533

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               ++  +W+SMI+ +  HG     +E F++M   G++P + + +++LSACSH GLV E
Sbjct: 534 LMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G +++N+M E++ ++P+ EH+ C+VD+L R+G L +A+EFI  +P Q    VW   L AC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             H +T++GK  A  + + +P     YI LSN+Y + G+W+++ E+ +
Sbjct: 654 RVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRR 701



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 262/563 (46%), Gaps = 42/563 (7%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +DVV+W+AM+     N      +  F E +E G+  +      ++ A +  + +  GRV
Sbjct: 128 KRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 95  VHCLSIKAGMIADSSLCN--VFVNMYAKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLH 151
           +    +K G   +S +C     ++M+ K  +   ++   F  M   + V+W  +++ C+ 
Sbjct: 188 ILGFLMKTGHF-ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +P + + +F +M  SG ++D  +LSS  +A A L  LS G+ +H+  I+ G  D    
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLAD---- 302

Query: 212 SVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF-EEAFDLLHE 267
            V  SL+ MY++C   G ++   + F  M    V+SW A+I G+  N     EA +L  E
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSE 362

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M     VEP+  T  +    C +    R G+ V G+A +R L  +  + NS++  + K +
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCD 422

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQ----------FSFSTLL 372
            +  A   F +++  N LVS+N+ + G      F+    L S+          F+F++LL
Sbjct: 423 RMEDARTAFESLSEKN-LVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLL 481

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA---FSLLQRI 429
           + + +     SL  G+ IH   LKLG S N    NAL+ MY  CG +  A   FSL+   
Sbjct: 482 SGVANVG---SLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMD-- 536

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
             N +   W  +I    ++G  +  ++TF  MT ++   P+ VT V ++SAC ++ L  E
Sbjct: 537 --NRNVISWTSMITGFAKHGFAERVLETFNQMT-KEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 490 G-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAF 547
           G +  + +     +         ++ +  R   +  A     +  +  ++  W   + A 
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 548 S-QNKAEVRALELFRHLEFEPNE 569
              +  E+  L   + LEF+PNE
Sbjct: 654 RVHSNTELGKLAARKILEFDPNE 676



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 266/556 (47%), Gaps = 44/556 (7%)

Query: 64  MVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           M  +GIR  DS T   ++ +  +    + G++VH   I+  +  DS L N  +++Y+K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111

Query: 123 DLNSSECTFSGM---HCADTVSWNTIMSGCLHNNYPE----KCLLYFREMGWSGEQADNV 175
           DL  ++  F  M      D VSW+ +M+ C  NN  E    K  + F EMG         
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMA-CFGNNGREFDAIKLFVEFLEMGLVPNDYCYT 170

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD-IEAAERAF 234
           ++  A + S  +G    G+VI    +K G+ +S  V V  SLI M+ +  +  E A + F
Sbjct: 171 AVIRACSNSDFVG---VGRVILGFLMKTGHFESD-VCVGCSLIDMFVKGENSFENAYKVF 226

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M+  +VV+W  +I      G   EA     +M ++   E D  T+ ++ S CA+   L
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKFTLSSVFSACAELENL 285

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMI 352
             GR +H +AIR  L  D+    SL+D Y+K ++    +        M D  ++SW ++I
Sbjct: 286 SLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALI 343

Query: 353 SG-------------LFKEMLYL----CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           +G             LF EM+       + F+FS+      +C +      GK +     
Sbjct: 344 TGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK---ACGNVSDPRVGKQVLGHAF 400

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K G ++N+   N+++ M++ C  +  A +  + +S  +  S +N  +    +N  F+ A 
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVS-YNTFLDGTCRNLDFEHAF 459

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           +    + +++     + T  +++S   N+    +G+ +H   LK  +  +  V NALI+M
Sbjct: 460 ELLSEIAERE-LGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISM 518

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  I +AS VF    N N+ +W  MI+ F+++    R LE F  +  E   PNE++ 
Sbjct: 519 YSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTY 578

Query: 573 VSILSACTQLGVLRHG 588
           V+ILSAC+ +G++  G
Sbjct: 579 VAILSACSHVGLVSEG 594



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 228/491 (46%), Gaps = 35/491 (7%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           FE++  +F +    +VVTW  MIT C++       + FF +MV  G   D  TL  + SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADT 139
             ++  L  GR +H  +I++G+ AD   C++ V+MYAKC   G ++     F  M     
Sbjct: 279 CAELENLSLGRQLHSWAIRSGL-ADDVECSL-VDMYAKCSADGSVDDCRKVFDRMQDHSV 336

Query: 140 VSWNTIMSGCLHN-NYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIH 197
           +SW  +++G + N N   + +  F EM   G  + ++ + SSA  A   + +   GK + 
Sbjct: 337 MSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVL 396

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               K G   +   SV+NS+ISM+ +C  +E A  AF  ++ K++VS+N  +DG   N  
Sbjct: 397 GHAFKRGL--ASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLD 454

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           FE AF+LL E+   R +     T  +L+S  A+   LR+G  +H   ++  L  +  + N
Sbjct: 455 FEHAFELLSEIA-ERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCN 513

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  YSK  S+  A  +F+ +   N ++SW SMI+G             F +M     +
Sbjct: 514 ALISMYSKCGSIDTASRVFSLMDNRN-VISWTSMITGFAKHGFAERVLETFNQMTKEGVK 572

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNA-----LMHMYINCGDL 419
            +  T +AIL +C+       G     W+     + ++ I         ++ +    G L
Sbjct: 573 PNEVTYVAILSACS-----HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVI 478
             AF  +  +   +D   W   + AC  + + +   +   K +    N     + L N+ 
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIY 687

Query: 479 SACGNLELAFE 489
           ++ G  E + E
Sbjct: 688 ASAGKWEESTE 698


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 177/611 (28%), Positives = 298/611 (48%), Gaps = 100/611 (16%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  +NA I  F   G  E A +L+   Q     E +  T  +++ LCA      +G+ VH
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELICMCQ---KSELETKTYGSVLQLCAGLKSFTDGKKVH 122

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN------------------ 343
                  +G D  +   L+ FY+    L +   +F+ +   N                  
Sbjct: 123 SIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 344 --------------------------------DLVSWNSMISG------------LFKEM 359
                                           D++SWNSMISG            ++K+M
Sbjct: 183 ESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +YL      +T++++L  C +  +L  GK++H   +K  F       N L+ MY  CGDL
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  + +++   +  S W  +I   T++G    AIK  + M +++    D V + +++ 
Sbjct: 303 DGALRVFEKMGERNVVS-WTSMIAGYTRDGRSDGAIKLLQQM-EKEGVKLDVVAITSILH 360

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC        GK +H     + M  +  V NAL+ MY +C  +++A++VF +    ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIIS 420

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           WN MI                   E +P+  ++  +L AC  L  L  GK+IHG++   G
Sbjct: 421 WNTMIG------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNG 462

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           +  +  +++AL+D+Y  C               K   +W+ MI+ YG HG G EAI  F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFN 522

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           EM ++GI P + S IS+L ACSHSGL+++G +++  M  ++++ P+ EH+ C+VD+L R+
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L +AYEF++ LPI P   +WGA+L  C ++ D ++ ++VAE +F+LEPEN GYY+ L+
Sbjct: 583 GNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLA 642

Query: 765 NMYVALGRWKD 775
           N+Y    +W++
Sbjct: 643 NIYAEAEKWEE 653



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 215/456 (47%), Gaps = 66/456 (14%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD------- 138
           +     G+ VH +     +  D +L    V+ YA CGDL      F  M   +       
Sbjct: 112 LKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFM 171

Query: 139 --------------------------------------------TVSWNTIMSGCLHNNY 154
                                                        +SWN+++SG + N  
Sbjct: 172 VSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGL 231

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +++M + G   D  ++ S +   A  G LS GK +H+L IK  +E    ++ +
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR--INFS 289

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MYS+CGD++ A R F  M  ++VVSW ++I G+  +G+ + A  LL +M+    V
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME-KEGV 348

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D+  + +++  CA S  L  G+ VH Y     +  +L + N+LMD Y+K  S+  A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +F+ +  + D++SWN+MI  L  +           T+  +LP+C S  +LE GK IH + 
Sbjct: 409 VFSTMV-VKDIISWNTMIGELKPDS---------RTMACVLPACASLSALERGKEIHGYI 458

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           L+ G+S++    NAL+ +Y+ CG L  A  L   I  + D   W ++I     +G+  EA
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEA 517

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           I TF  M +     PD V+ ++++ AC +  L  +G
Sbjct: 518 IATFNEM-RDAGIEPDEVSFISILYACSHSGLLEQG 552



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 204/441 (46%), Gaps = 50/441 (11%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           ES+  LF + C++DV++WN+MI+  V N     GL  + +M+  GI  D  T++ ++   
Sbjct: 202 ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
                L  G+ VH L+IK+      +  N  ++MY+KCGDL+ +   F  M   + VSW 
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++++G   +   +  +   ++M   G + D V+++S + A A  G L  GK +H   IK 
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKA 380

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
              +S  + V N+L+ MY++CG +EAA   F  M  KD++SWN +I              
Sbjct: 381 NNMESN-LFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG------------- 426

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                     ++PD  T+  ++  CA    L  G+ +HGY +R     D  + N+L+D Y
Sbjct: 427 ---------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTL 371
            K   L  A LLF+ I P  DLVSW  MI+G             F EM     +    + 
Sbjct: 478 VKCGVLGLARLLFDMI-PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFS 424
           ++IL +C+    LE G     W+       N   +   +  Y          G+L  A+ 
Sbjct: 537 ISILYACSHSGLLEQG-----WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            ++ +    D + W  ++  C
Sbjct: 591 FMETLPIAPDATIWGALLCGC 611



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 145/579 (25%), Positives = 240/579 (41%), Gaps = 116/579 (20%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCK----------------------------------- 240
            L+S Y+ CGD++   R F  M  K                                   
Sbjct: 139 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 198

Query: 241 ----------------DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
                           DV+SWN++I G+  NG  E    +  +M  +  ++ D+AT++++
Sbjct: 199 KRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL-GIDVDLATIISV 257

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  CA+S  L  G++VH  AI+      +   N+L+D YSK   L  A  +F  +   N 
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN- 316

Query: 345 LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           +VSW SMI+G            L ++M     +     + +IL +C    SL+ GK +H 
Sbjct: 317 VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           +       +N    NALM MY  CG + AA S+   +    D   WN +I      G  +
Sbjct: 377 YIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV-VKDIISWNTMI------GELK 429

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
                           PDS T+  V+ AC +L     GK +HG  L++    D  V NAL
Sbjct: 430 ----------------PDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNE 569
           + +Y +C  +  A  +F+   + +L +W  MI+ +  +     A+  F   R    EP+E
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISA 629
           +S +SIL AC+  G+L  G +     F++   +N F     L+ Y      A    ++S 
Sbjct: 534 VSFISILYACSHSGLLEQGWRF----FYI--MKNDFNIEPKLEHY------ACMVDLLSR 581

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
            G   K +E +E         I P  +   +LL  C +   ++   +    + E   + P
Sbjct: 582 TGNLSKAYEFMETLP------IAPDATIWGALLCGCRNYHDIELAEKVAERVFE---LEP 632

Query: 690 E-TEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPG 724
           E T ++V + ++   + K +E     E I    ++  PG
Sbjct: 633 ENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPG 671



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 29/355 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S +LL  YS     + +L +F +   ++VV+W +MI     +      +    
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQ 341

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M +EG++ D   +  I+ A  +   L  G+ VH       M ++  +CN  ++MYAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCG 401

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            + ++   FS M   D +SWNT++                      GE + D+ +++  +
Sbjct: 402 SMEAANSVFSTMVVKDIISWNTMI----------------------GELKPDSRTMACVL 439

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  GK IH   ++ GY    +V+  N+L+ +Y +CG +  A   F  +  KD
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL +G    
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFF 556

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y ++     +  L     ++D  S++ +LSKA      +    D   W +++ G
Sbjct: 557 -YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610


>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
 gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
          Length = 657

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 174/508 (34%), Positives = 274/508 (53%), Gaps = 31/508 (6%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
            R++HG ++      D  + ++L   Y K + +  A  +F+A+ P  D + WN++++GL 
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAV-PSPDTILWNTLLAGLP 191

Query: 356 -------FKEMLYLCSQFSFSTLLAI-LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  F  M+ +      ST LA  L +      +  G+ +H + +K G + +   V 
Sbjct: 192 GSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            LM +Y  CGD+  A SL  R+  + D   +N +I   + NG  + +++ FK +    + 
Sbjct: 252 GLMSLYSKCGDMDCARSLFDRM-EDPDLVAYNALISGYSVNGMVESSVELFKELAAS-DW 309

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+S TLV VI            + LH   +K+ +  D  V  AL T+Y R  D++SA +
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGV 584
           +F++     + +WN MIS ++QN     A+ELF+    L  +PN  +I S LSAC QLG 
Sbjct: 370 IFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGA 429

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISA 629
           L  G  +H  +     + N ++ +AL+DMY+ C S A               +W++MIS 
Sbjct: 430 LSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           YG HG+G EA++L+  M ++ I PT S+ +S+L ACSH GLVDEG + +  M  EY + P
Sbjct: 490 YGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISP 549

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHHGDTKMGKQVAEL 748
             EH  C+VD+LGR+GKL EA + I   P     PGVWGA+LSAC  H ++ + K  ++ 
Sbjct: 550 GIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLAKLASQK 609

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDA 776
           LF+L+ EN GYY+ LSN+Y +   + +A
Sbjct: 610 LFELDSENAGYYVLLSNLYTSKKHYSEA 637



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 207/414 (50%), Gaps = 21/414 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            R +H LS+ AG  AD+ + +    +Y K   ++ +   F  +   DT+ WNT+++G L 
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAG-LP 191

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            +   +  +   E+G    + D+ +L+S++ A+A    ++ G+ +H  G+K G  +  + 
Sbjct: 192 GSVALEAFVRMVEVGRV--RPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEH- 248

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V   L+S+YS+CGD++ A   F  M   D+V++NA+I G+++NG  E + +L  E+   
Sbjct: 249 -VVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELA-A 306

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
               P+ +T+V +I + +        R +H + ++  L  D L+  +L   Y + N +  
Sbjct: 307 SDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F+A+ P   + SWN+MISG            LF+ M  L  Q + +T+ + L +C 
Sbjct: 367 ARSIFDAM-PEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACA 425

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
              +L  G  +H    K     N   + AL+ MY  CG +  A S+  R+  N +   WN
Sbjct: 426 QLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKNVVSWN 484

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            +I     +G   EA+K +KSM       P S T ++V+ AC +  L  EG+ +
Sbjct: 485 AMISGYGLHGRGAEALKLYKSML-DACILPTSSTFLSVLYACSHGGLVDEGQKV 537



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 31/463 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ A    +++L   Y  +S  + +  +F    + D + WN ++     +    + L  F
Sbjct: 144 GYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPGS----VALEAF 199

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MVE G +R DSTTL   + A  + + +  GR VH   +K G+     +    +++Y+K
Sbjct: 200 VRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSK 259

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD++ +   F  M   D V++N ++SG   N   E  +  F+E+  S  + ++ +L + 
Sbjct: 260 CGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAV 319

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +  G     + +HA  +K   +    VS   +L ++Y +  D+E+A   F  M  K
Sbjct: 320 IPVYSPFGHELLARCLHAFVVKARLDADALVS--TALTTLYCRLNDMESARSIFDAMPEK 377

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            + SWNA+I G+A NG  E A +L   MQ + +V+P+  T+ + +S CA    L  G  V
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVELFQLMQEL-NVQPNPTTISSTLSACAQLGALSLGTWV 436

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H    +  L  ++ +M +L+D Y+K  S+++A  +F+ +   N +VSWN+MISG      
Sbjct: 437 HRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKN-VVSWNAMISGYGLHGR 495

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNT 403
                 L+K ML  C   + ST L++L +C+    ++ G+ +     + +++  G  + T
Sbjct: 496 GAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCT 555

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVAC 445
             V+ L       G L  A  L+     ++     W  ++ AC
Sbjct: 556 CMVDLLG----RAGKLNEALDLISEFPQSAIGPGVWGALLSAC 594



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 150/345 (43%), Gaps = 55/345 (15%)

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           A   ++LHGL++ +    DT V +AL  +Y +   +  A  VF++  + +   WN +++ 
Sbjct: 130 AAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAG 189

Query: 547 FSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
              +   +A VR +E+ R     P+  ++ S L A  +   +  G+ +HG+    G  E+
Sbjct: 190 LPGSVALEAFVRMVEVGR---VRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEH 246

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + + L+ +YS C                   A++++IS Y  +G    ++ELF E+  
Sbjct: 247 EHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAA 306

Query: 649 SGIRPTKSSVIS-----------LLSACSHSGLVDEGLQ--------------YYNNMLE 683
           S  RP  S++++           LL+ C H+ +V   L                 N+M  
Sbjct: 307 SDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366

Query: 684 E---YDVRPET--EHHVCIVDMLGRSGKLQ---EAYEFIKNLPIQPKPGVWGAMLSACSH 735
               +D  PE   E    ++    ++G  +   E ++ ++ L +QP P    + LSAC+ 
Sbjct: 367 ARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQ 426

Query: 736 HGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDAVEI 779
            G   +G  V  ++ K   E NV    +L +MY   G   +A  I
Sbjct: 427 LGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSI 471


>gi|255575102|ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532132|gb|EEF33939.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 664

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 195/662 (29%), Positives = 344/662 (51%), Gaps = 43/662 (6%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  ++ +G+  D  T   ++ A T     K+G ++H   +  G+ +D  +    VNMY+K
Sbjct: 2   YHSILNKGLEPDKCTFTFVLKACTGGLEFKEGILIHRGIVFKGLESDVFVGTALVNMYSK 61

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD   ++  F  M   D V+WN ++ G  H+  P++ L   + M  +G++ D V++ + 
Sbjct: 62  MGDPQLAKGVFDKMPKRDVVTWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIVNL 121

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A + L ++   + +H   I+ G+   P V  +N LI MYS+CGDI  A + F  M   
Sbjct: 122 VPAVSRLADIDACRSLHGYVIRRGF---PAV-FSNGLIDMYSKCGDIYVACQVFELMQHT 177

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + +SW  ++ G+A N  F E  DL   M+   +   +  +V + +   AD      G+ +
Sbjct: 178 NDISWRTMMAGYAHNECFFEVLDLFDYMK-KNNFRLNKVSVASALLAAADVRDSGRGKEI 236

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
             +A ++ +  D+ +  ++M  Y+K  +L KA+ LF  +  + DLV+W+++I  L     
Sbjct: 237 CEFARQQGIDSDVSITTAMMTMYAKCGNLDKAKQLFQGL-KVKDLVAWSAIIDALVQSRY 295

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F++M     + +  TLL++LP+C    SL  GKS+HC+ +K  F ++ +   +
Sbjct: 296 AEDALSLFRDMQNDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTS 355

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG   +A ++  R+      +C N +I   +Q G    A++ F  + Q     
Sbjct: 356 LVSMYAKCGLFNSALTVFNRMPCEDIVTC-NALINEYSQIGDPYHAMEVFH-VVQISEIL 413

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSAS 526
           PDS T+V ++S C  L    +G  +HGL +K   G D+   V+N+LI MY +C  + +A 
Sbjct: 414 PDSRTMVCLLSVCILLHDLEQGSCIHGLIIK--FGFDSHCNVKNSLIDMYAKCGSLANAE 471

Query: 527 TVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
            +F+   +  +  +WN +I+ +  N+    A  LF  ++   F+PN ++ VS+  A  +L
Sbjct: 472 FLFKRTEFTKDEVSWNALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVTFVSVFPAVARL 531

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMI 627
             L+ G  +H  +  +GFQ N  + + L+DMY+ C               K+  +W+ M+
Sbjct: 532 SALKEGMALHACIMRMGFQSNVLVGNCLIDMYAKCGQLHNSEHLFHEMKNKNAVSWNVML 591

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           + Y  HG+G+ AIELF  M  S I+    S +S+LSAC HSGL+DEG + +++M +E+ +
Sbjct: 592 AGYAVHGQGYHAIELFSLMQKSHIQADSLSFLSVLSACRHSGLIDEGRKIFDSMYKEHQL 651

Query: 688 RP 689
            P
Sbjct: 652 EP 653



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 305/606 (50%), Gaps = 22/606 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + +   T+L+  YS +   + +  +F +   +DVVTWNAMI     +      L  
Sbjct: 43  KGLESDVFVGTALVNMYSKMGDPQLAKGVFDKMPKRDVVTWNAMIFGLSHSVAPQEALKL 102

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M   G   D  T++ +V A++++  +   R +H   I+ G  A  S  N  ++MY+K
Sbjct: 103 VKSMQLAGQEPDFVTIVNLVPAVSRLADIDACRSLHGYVIRRGFPAVFS--NGLIDMYSK 160

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD+  +   F  M   + +SW T+M+G  HN    + L  F  M  +  + + VS++SA
Sbjct: 161 CGDIYVACQVFELMQHTNDISWRTMMAGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASA 220

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A+A + +   GK I     + G +    VS+T ++++MY++CG+++ A++ F G+  K
Sbjct: 221 LLAAADVRDSGRGKEICEFARQQGIDSD--VSITTAMMTMYAKCGNLDKAKQLFQGLKVK 278

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+W+AIID    +   E+A  L  +MQ    ++ +  T+++++  CAD + LR G+SV
Sbjct: 279 DLVAWSAIIDALVQSRYAEDALSLFRDMQ-NDFLKANNVTLLSVLPACADLMSLRLGKSV 337

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--GLFKE 358
           H YAI+     D+L+  SL+  Y+K    + A  +FN + P  D+V+ N++I+      +
Sbjct: 338 HCYAIKADFDSDILIGTSLVSMYAKCGLFNSALTVFNRM-PCEDIVTCNALINEYSQIGD 396

Query: 359 MLYLCSQFSFSTLLAILPS----------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
             +    F    +  ILP           C     LE G  IH   +K GF ++    N+
Sbjct: 397 PYHAMEVFHVVQISEILPDSRTMVCLLSVCILLHDLEQGSCIHGLIIKFGFDSHCNVKNS 456

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG L  A  L +R     D   WN +I     N H +EA   F  M + ++  
Sbjct: 457 LIDMYAKCGSLANAEFLFKRTEFTKDEVSWNALIAGYVHNEHAKEAFSLFCQM-KLEHFQ 515

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+ VT V+V  A   L    EG +LH   ++     +  V N LI MY +C  + ++  +
Sbjct: 516 PNLVTFVSVFPAVARLSALKEGMALHACIMRMGFQSNVLVGNCLIDMYAKCGQLHNSEHL 575

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           F    N N  +WN M++ ++ +     A+ELF  ++    + + +S +S+LSAC   G++
Sbjct: 576 FHEMKNKNAVSWNVMLAGYAVHGQGYHAIELFSLMQKSHIQADSLSFLSVLSACRHSGLI 635

Query: 586 RHGKQI 591
             G++I
Sbjct: 636 DEGRKI 641


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 197/696 (28%), Positives = 335/696 (48%), Gaps = 37/696 (5%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KCG L      F  M   + VSW  ++SG + N   E  L  + EM  +G   +  +
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L     A A LG    G  +H   +K+G E +P+V   +S+++MY++ GDIE AER F  
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVG--SSILNMYAKLGDIEDAERVFEC 118

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M    V  WNA+I G+A      E+  ++  MQ  + +  D  T +  +  C     L  
Sbjct: 119 MDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQY-KGISMDAFTFINALKGCLVVGNLNF 177

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
           GR +HG  I+  +G+   +MNSLMD Y K+     A  +F+ +    D++SWN++ +GL 
Sbjct: 178 GRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQD-KDIISWNTVFAGLS 236

Query: 356 -----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                      F +++    + +  T   +   C     L  G   HC   + G S+   
Sbjct: 237 QGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEAS 296

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             ++L++M+  CG +  A  +       S  +C N +I     N H  EA+  F ++   
Sbjct: 297 VTSSLINMFSRCGAMRMACLVFDSAPFKSIHTC-NEMISGYNLNCHNAEALNLFCNL-NG 354

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
                D  T  + + AC   E    G+ +HG  +KS       V ++L+  Y     +  
Sbjct: 355 LGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDD 414

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQ 581
           +   F      +L +W  MISA         A+ L   L+    +P+E    SI + C  
Sbjct: 415 SFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAG 474

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSS 625
           +   R  K +H  V  +G++ + F++SA++D Y+ C                +    +++
Sbjct: 475 IAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNT 534

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           M+ AY +HG   EA+E F +M  + + P++++ +S++SACSH GLV++G  ++ +M  +Y
Sbjct: 535 MVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDY 594

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  +++ C+VD+  R+G L++A   I+ +P  P P +W ++L+ C  HG+ ++G+  
Sbjct: 595 GMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWA 654

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           A+ L +L PEN   Y+ LS +Y   G W DA ++ K
Sbjct: 655 AKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRK 690



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 274/588 (46%), Gaps = 22/588 (3%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           Y+   +    L +F E   K++V+W  +++  V+N    MGL  + EM+  G+  +   L
Sbjct: 2   YTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFAL 61

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             +  A   +   + G  VHC ++K GM  +  + +  +NMYAK GD+  +E  F  M  
Sbjct: 62  GCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDN 121

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
                WN ++ G    +Y  + L     M + G   D  +  +A+     +G L++G+ I
Sbjct: 122 LVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQI 181

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H L I+   E     +V NSL+ MY + G    A + F  +  KD++SWN +  G +   
Sbjct: 182 HGLIIQ--SEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGD 239

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
              E     H++ ++  ++P+  T   L   C ++L L  G   H  A R  +  +  + 
Sbjct: 240 DAREIGRFFHKL-MLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVT 298

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
           +SL++ +S+  ++  A L+F++ AP   + + N MISG            LF  +  L  
Sbjct: 299 SSLINMFSRCGAMRMACLVFDS-APFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGL 357

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +    T  + L +C   E+ + G+ +H   +K GF++     ++L+  Y+  G L  +F 
Sbjct: 358 EADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFE 417

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
               +    D   W  +I A    G+  EAI     + ++    PD     ++ + C  +
Sbjct: 418 FFNGVER-LDLVSWGAMISALVHKGYSSEAIGLLNRL-KEAGGKPDEFIFGSIFNCCAGI 475

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCM 543
               + KS+H L +K        V +A+I  Y +C DI++A  VF+      ++  +N M
Sbjct: 476 AAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTM 535

Query: 544 ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
           + A++ +     A+E F  ++    EP++ + VS++SAC+ LG++  G
Sbjct: 536 VMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQG 583



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 137/543 (25%), Positives = 238/543 (43%), Gaps = 32/543 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             +S+L  Y+ +   E +  +F    N  V  WNAMI    +       L     M  +G
Sbjct: 95  VGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKG 154

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  D+ T +  +     +  L  GR +H L I++ +   +++ N  ++MY K G    + 
Sbjct: 155 ISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYAL 214

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   D +SWNT+ +G    +   +   +F ++  +G + + V+ S          
Sbjct: 215 KVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEAL 274

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G   H L  + G  D    SVT+SLI+M+S+CG +  A   F     K + + N +
Sbjct: 275 DLVSGLQFHCLAFRFGISDE--ASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEM 332

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+ LN    EA +L   +  +  +E D  T  + +  C  +   + GR +HG  ++  
Sbjct: 333 ISGYNLNCHNAEALNLFCNLNGL-GLEADECTFSSALEACFRTENQKLGRQMHGTIVKSG 391

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------- 355
                 + +SL+  Y     L  +   FN +  + DLVSW +MIS L             
Sbjct: 392 FASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERL-DLVSWGAMISALVHKGYSSEAIGLL 450

Query: 356 --FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
              KE      +F F +   I   C    +    KS+H   +K+G+  +    +A++  Y
Sbjct: 451 NRLKEAGGKPDEFIFGS---IFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAY 507

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CGD+  A  +  + S   D   +N +++A   +G  +EA++TF+ M +     P   T
Sbjct: 508 AKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKM-KLATLEPSQAT 566

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSL---MGLDTRVQN--ALITMYGRCRDIKSASTV 528
            V+VISAC +L L  +G     +  KS+    G+D    N   L+ ++ R   ++ A  +
Sbjct: 567 FVSVISACSHLGLVEQGD----IFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHI 622

Query: 529 FES 531
            E+
Sbjct: 623 IET 625



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 7/349 (2%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            ++SL+  +S       +  +F     K + T N MI+    N      L+ F  +   G
Sbjct: 297 VTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLG 356

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  T    + A  +    K GR +H   +K+G  +   +C+  +  Y   G L+ S 
Sbjct: 357 LEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSF 416

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+G+   D VSW  ++S  +H  Y  + +     +  +G + D     S     A + 
Sbjct: 417 EFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIA 476

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNA 247
                K +H+L +K+GYE   +V V +++I  Y++CGDIE A R F   +  +DV+ +N 
Sbjct: 477 AYRQTKSVHSLVVKMGYE--AHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNT 534

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  +A +G   EA +   +M+L  ++EP  AT V++IS C+   L+ +G  +   ++  
Sbjct: 535 MVMAYAHHGLVREAVETFEKMKLA-TLEPSQATFVSVISACSHLGLVEQG-DIFFKSMNL 592

Query: 308 LLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G D    N   L+D +S++  L  A+ +   +        W S+++G
Sbjct: 593 DYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNG 641



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 3/260 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +     +SLL  Y      + S   F      D+V+W AMI+A V        +   
Sbjct: 391 GFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLL 450

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             + E G + D      I +    +   +Q + VH L +K G  A   + +  ++ YAKC
Sbjct: 451 NRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKC 510

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           GD+ ++   F       D + +NT++    H+    + +  F +M  +  +    +  S 
Sbjct: 511 GDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSV 570

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A + LG +  G +     + L Y   P       L+ ++S+ G +E A+     M   
Sbjct: 571 ISACSHLGLVEQGDIFFK-SMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFP 629

Query: 241 DVVS-WNAIIDGFALNGKFE 259
              + W ++++G  ++G  E
Sbjct: 630 PWPAIWRSLLNGCRIHGNKE 649


>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 193/576 (33%), Positives = 295/576 (51%), Gaps = 41/576 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +D V WNA+I G++ NG   +A+ L   M L +   P   T+V L+  C     + +
Sbjct: 1   MPERDTVVWNALICGYSRNGYESDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQ 59

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           GRSVHG A +  L  D  + N+L+ FYSK   L  AE+LF  +      VSWN+MI    
Sbjct: 60  GRSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKD-KSTVSWNTMIGAYS 118

Query: 353 -SGL-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
            SGL       FK M     + S  T++ +L +  S E L      HC  +K G  N+  
Sbjct: 119 QSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEPL------HCLVVKSGMVNDIS 172

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            V +L+  Y  CG L +A  L    + +S     +IV  +  + G    A+  F  M +Q
Sbjct: 173 VVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIV-SSYAEKGDMDIAVVYFSKM-RQ 230

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
                D+V LV ++  C N      G SLHG A+KS +   T V N LITMY +  D+++
Sbjct: 231 LCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVET 290

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACT 580
              +F+      L +WN +IS   Q+     A E+F  ++      P+ I+I S+L+ C+
Sbjct: 291 VLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCS 350

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSS 625
           QL  L  GK++HG+     F+  +F+ +AL+DMY+ C +                A W+S
Sbjct: 351 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 410

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MIS Y   G    A+  + EM   G++P K + + +LSAC+H G VDEG  Y+  M++E+
Sbjct: 411 MISGYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEF 470

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            + P  +H+  +V +LGR+    EA   I  + I+P   VWGA+LSAC  H + ++G+ +
Sbjct: 471 GISPCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYI 530

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           A+ +F L+ +N G Y+ +SN+Y     W D V + K
Sbjct: 531 AKKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRK 566



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 155/607 (25%), Positives = 281/607 (46%), Gaps = 63/607 (10%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D V WNA+I     N         F  M+++G    +TTL+ ++    Q   + QGR V
Sbjct: 4   RDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H ++ K+G+  DS + N  ++ Y+KC +L+S+E  F  M    TVSWNT++     +   
Sbjct: 64  HGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLM 123

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E+ +  F+ M     +   V++ + ++A      +S+ + +H L +K G  +   +SV  
Sbjct: 124 EEAITVFKNMFEKSVEISPVTIINLLSA-----HVSH-EPLHCLVVKSGMVND--ISVVT 175

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+  YS+CG +++AER +       +V   +I+  +A  G  + A     +M+ +  ++
Sbjct: 176 SLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQL-CMK 234

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D   +V ++  C +S  +  G S+HGYAI+  L    L++N L+  YSK + +     L
Sbjct: 235 IDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFL 294

Query: 336 FNAIAPMNDLVSWNSMISGLFKE-----MLYLCSQFSFS--------TLLAILPSCNSPE 382
           F  +     L+SWNS+ISG  +         +  Q   S        T+ ++L  C+   
Sbjct: 295 FQQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLC 353

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK +H + L+  F N      AL+ MY  CG+ V A S+ + I     T+ WN +I
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC-TATWNSMI 412

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
              + +G    A+  +  M +++   PD +T + V+SAC +     EGK ++  A+    
Sbjct: 413 SGYSLSGLQNRALSCYLEM-REKGLKPDKITFLGVLSACTHGGFVDEGK-IYFRAMIKEF 470

Query: 503 GLDTRVQN--ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
           G+   +Q+   ++ + GR                       C+ +          AL L 
Sbjct: 471 GISPCLQHYALMVGLLGRA----------------------CLFT---------EALYLI 499

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
             ++ +P+     ++LSAC     L  G+ I   +F L ++ N  +   + ++Y+   + 
Sbjct: 500 WKMDIKPDSAVWGALLSACIIHRELEVGEYIAKKMFMLDYK-NGGLYVLMSNLYA---TE 555

Query: 621 AAWSSMI 627
           A W  ++
Sbjct: 556 AMWDDVV 562



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 209/454 (46%), Gaps = 36/454 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ YS  +  +S+  LF E  +K  V+WN MI A  ++  +   +  F  M E+ +  
Sbjct: 81  ALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAITVFKNMFEKSVEI 140

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T++ ++SA      L      HCL +K+GM+ D S+    V  Y++CG L+S+E  +
Sbjct: 141 SPVTIINLLSAHVSHEPL------HCLVVKSGMVNDISVVTSLVCAYSRCGYLDSAERLY 194

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +  +    V   +I+S        +  ++YF +M     + D V+L   +        + 
Sbjct: 195 ASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVALVGILHGCKNSSHID 254

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   IK G      V   N LI+MYS+  D+E     F  +    ++SWN++I G
Sbjct: 255 IGMSLHGYAIKSGLCRKTLV--VNGLITMYSKFDDVETVLFLFQQLQETPLISWNSVISG 312

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G+   AF++ H+M+L   + PD  T+ +L++ C+    L  G+ +HGY +R     
Sbjct: 313 CVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 372

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISGL------------FKE 358
           +  +  +L+D Y+K  +  +AE +F +I AP     +WNSMISG             + E
Sbjct: 373 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT--ATWNSMISGYSLSGLQNRALSCYLE 430

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCG 417
           M     +    T L +L +C     ++ GK      +K        G++  L H  +  G
Sbjct: 431 MREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIK------EFGISPCLQHYALMVG 484

Query: 418 DL------VAAFSLLQRISHNSDTSCWNIVIVAC 445
            L        A  L+ ++    D++ W  ++ AC
Sbjct: 485 LLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 518



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 149/298 (50%), Gaps = 4/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   TSL+ AYS   Y +S+  L+       +V   +++++  E   + + + +F
Sbjct: 166 GMVNDISVVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYF 225

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +  ++ D+  L+ I+      + +  G  +H  +IK+G+   + + N  + MY+K 
Sbjct: 226 SKMRQLCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKF 285

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
            D+ +    F  +     +SWN+++SGC+ +         F +M  SG    D ++++S 
Sbjct: 286 DDVETVLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASL 345

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +A  + L  L+ GK +H   ++  +E+  +  V  +LI MY++CG+   AE  F  +   
Sbjct: 346 LAGCSQLCCLNLGKELHGYTLRNNFENENF--VCTALIDMYAKCGNEVQAESVFKSIKAP 403

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
              +WN++I G++L+G    A     EM+  + ++PD  T + ++S C     + EG+
Sbjct: 404 CTATWNSMISGYSLSGLQNRALSCYLEMR-EKGLKPDKITFLGVLSACTHGGFVDEGK 460


>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 748

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 186/637 (29%), Positives = 337/637 (52%), Gaps = 40/637 (6%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D  +  S + A   L  LS+G  IH   +  G+  S    +++SL+++Y++ G +  A +
Sbjct: 45  DTFTFPSLLKACTSLQLLSFGLSIHQKVLVNGF--SSDSYISSSLVNLYAKFGLLGHARK 102

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  +DVV W A+I  ++  G F EA  L+ EM+  + ++P   T + ++S  ++  
Sbjct: 103 VFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRF-QGIKPSPVTFLEMLSGISE-- 159

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            + + + +H +A+      D+ +MNS+++ Y K + +  A+ LF+ +    D+VSWN+MI
Sbjct: 160 -ITQLQCLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQM-EQRDMVSWNTMI 217

Query: 353 SGL-----FKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           SG        E+L L  +           T  A L    +   LE G+ +HC  +  GF 
Sbjct: 218 SGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFD 277

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +     AL+ MY+ CG+  A++ +L+ I  + D  CW ++I    + G  ++A+  F  
Sbjct: 278 GDMHLRTALITMYLKCGEEEASYRVLETIP-DKDVVCWTVMISGLMRLGRAEKALIVFSE 336

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M     +   S  + +V+++C  L     G S+HG  L+    LDT   N+ ITMY +C 
Sbjct: 337 MLHS-GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCG 395

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP----NEISIVSIL 576
            +  +  +FE     +L +WN +IS  +Q+    +AL LF  ++F+     + +++VS+L
Sbjct: 396 HLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLL 455

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC+  G L  G+ IH  V     +  + + +AL+DMYS C               K   
Sbjct: 456 QACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVV 515

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W ++I+ YG+HGKG  A+E++ E  + G++P     +++LS+CSH+G+V +GL+ +++M
Sbjct: 516 SWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           + ++ V P  EH  C+VD+L R+ ++++A++F K    +P   V G +L A   +G T++
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHANGKTEV 635

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
              +   + +L+P + G+Y+ L + + A+ RW D  E
Sbjct: 636 EDIICRDMIELKPVDAGHYVRLGHSFAAMKRWDDVSE 672



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 198/404 (49%), Gaps = 21/404 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           GF   +    S+L  Y        +  LF +   +D+V+WN MI+  A V N   ++ L 
Sbjct: 174 GFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLL 233

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +   M ++G+R D  T    +S    M  L+ GR++HC  +  G   D  L    + MY 
Sbjct: 234 Y--RMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYL 291

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG+  +S      +   D V W  ++SG +     EK L+ F EM  SG    + +++S
Sbjct: 292 KCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIAS 351

Query: 180 AVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            VA+ A LG    G  +H   ++ GY  D+P +   NS I+MY++CG ++ +   F  M 
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRQGYTLDTPAL---NSFITMYAKCGHLDKSLILFERMN 408

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D+VSWNAII G A +G   +A  L  EM+     + D  TVV+L+  C+ +  L  GR
Sbjct: 409 ERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGR 468

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H   IR  +    L+  +L+D YSK   L  A+  FN+I    D+VSW ++I+G    
Sbjct: 469 MIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSIT-WKDVVSWGTLIAGYGFH 527

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
                   ++ E L+   + +    LA+L SC+    ++ G  I
Sbjct: 528 GKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKI 571



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 247/527 (46%), Gaps = 39/527 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LH 59
           GF +    S+SL+  Y+       +  +F E  ++DVV W AMI  C  +R  + G    
Sbjct: 76  GFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMI-GCY-SRAGIFGEACS 133

Query: 60  FFGEMVEEGIRFDSTTLLII---VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
              EM  +GI+    T L +   +S +TQ+ CL      H  ++  G   D ++ N  +N
Sbjct: 134 LVKEMRFQGIKPSPVTFLEMLSGISEITQLQCL------HAFALVYGFECDIAVMNSMLN 187

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNV 175
           +Y KC  +  ++  F  M   D VSWNT++SG     N  E   L +R M   G + D  
Sbjct: 188 LYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYR-MRDDGLRPDQQ 246

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +  ++++ S  + +L  G+++H   +  G++   ++    +LI+MY +CG+ EA+ R   
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLR--TALITMYLKCGEEEASYRVLE 304

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  KDVV W  +I G    G+ E+A  +  EM L    +     + ++++ CA      
Sbjct: 305 TIPDKDVVCWTVMISGLMRLGRAEKALIVFSEM-LHSGSDLSSEAIASVVASCAQLGSFD 363

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G SVHGY +R+    D   +NS +  Y+K   L K+ +LF  +    DLVSWN++ISG 
Sbjct: 364 LGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNE-RDLVSWNAIISGH 422

Query: 355 -----------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                      LF+EM +    Q    T++++L +C+S  +L  G+ IHC  ++      
Sbjct: 423 AQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPC 482

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           T+   AL+ MY  CG L AA      I+   D   W  +I     +G    A++ +    
Sbjct: 483 TLVDTALVDMYSKCGYLEAAQRCFNSITWK-DVVSWGTLIAGYGFHGKGDIALEIYSEFL 541

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
                 P+ V  + V+S+C +      G    GL + S M  D  V+
Sbjct: 542 -HFGMKPNHVIFLAVLSSCSH-----NGMVQQGLKIFSSMVRDFGVE 582



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 133/278 (47%), Gaps = 5/278 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G+    P   S +T Y+   + + SL LF     +D+V+WNA+I+   ++  +   L  
Sbjct: 375 QGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLL 434

Query: 61  FGEMVEEGI-RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F EM  + + + DS T++ ++ A +    L  GR++HC+ I++ +   + +    V+MY+
Sbjct: 435 FEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYS 494

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L +++  F+ +   D VSW T+++G   +   +  L  + E    G + ++V   +
Sbjct: 495 KCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLA 554

Query: 180 AVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW-GM 237
            +++ +  G +  G K+  ++    G E  P       ++ +  +   +E A + +    
Sbjct: 555 VLSSCSHNGMVQQGLKIFSSMVRDFGVE--PNHEHLACVVDLLCRAKRVEDAFKFYKENF 612

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           T   +     I+D    NGK E    +  +M  ++ V+
Sbjct: 613 TRPSIDVLGIILDASHANGKTEVEDIICRDMIELKPVD 650



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 124/258 (48%), Gaps = 22/258 (8%)

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +++R S  + T  +N  I   + +G  ++ + TF SM   +   PD+ T  +++ AC +L
Sbjct: 1   MIRRSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACTSL 59

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +L   G S+H   L +    D+ + ++L+ +Y +   +  A  VF+   + ++  W  MI
Sbjct: 60  QLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMI 119

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
             +S+      A  L + + F+   P+ ++ + +LS  +++  L   + +H      GF+
Sbjct: 120 GCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGISEITQL---QCLHAFALVYGFE 176

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            +  + +++L++Y  C               +   +W++MIS + +     E ++L + M
Sbjct: 177 CDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRM 236

Query: 647 CNSGIRPTKSSVISLLSA 664
            + G+RP + +  + LS 
Sbjct: 237 RDDGLRPDQQTFGASLSV 254


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 173/587 (29%), Positives = 301/587 (51%), Gaps = 37/587 (6%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V V NSL+S Y++ GD+ +A + F  +  KD++SWN+++  ++ +G  EE  +L  +M  
Sbjct: 42  VVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD- 100

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              VEPD  T  +++  C+   LL  G+ VH    R     D  +  +L++ YSK   L 
Sbjct: 101 ---VEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLE 157

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSC 378
            A  +F+ I  + D   WN+MISGL            F+ M     +    + L IL +C
Sbjct: 158 SARRVFDGIQSV-DPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSAC 216

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            + E L  G  IH      G   + +   A+ +MY  C  +  A  +   ++  ++   W
Sbjct: 217 CALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSW 276

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I A  Q+G  +EA++ ++ M +++   PD +T    + AC +   + +G  +H    
Sbjct: 277 NSMIAAYAQSGRGREALELYELM-KEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRIT 335

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +S +  D  +  A++ MY +C ++++A + FE     N  TW+ M+ AF Q   +  AL+
Sbjct: 336 ESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALD 395

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISSALLDMY 614
           L+  +    F+P+EI++   L+AC+++G L+ GK IH  +      +N  F+ ++LL+MY
Sbjct: 396 LYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 455

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               + + +W+++I  + +HG   E + L  EM   G+ P   +  
Sbjct: 456 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFA 515

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +L ACSH+GL+D G  ++ +M  +Y ++P  +H+ C+VD+L R+G  +EA      +P 
Sbjct: 516 CVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPF 575

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
            P+P  W  +L AC  HG+TK G + A  L +L  E    Y+ LSN+
Sbjct: 576 TPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVLLSNL 622



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 162/616 (26%), Positives = 269/616 (43%), Gaps = 59/616 (9%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F +++    SL++AY+      S+  +F    NKD+++WN+M+ A  ++      L  F 
Sbjct: 38  FHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFR 97

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M    +  DS T   I+ A + M  L+ G+ VH    ++   +D +L    +NMY+KCG
Sbjct: 98  KM---DVEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCG 154

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L S+   F G+   D   WN ++SG + +    + L  F  M     + D VS  + ++
Sbjct: 155 VLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILS 214

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-D 241
           A   L +L  G  IH      G +    + V  ++ +MYS+C  ++ A + F GM  K +
Sbjct: 215 ACCALEDLHEGIRIHEHASACGMDKD--LVVETAVFNMYSKCRQVDLARKMFDGMNEKTN 272

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN++I  +A +G+  EA + L+E+     V+PD  T    +  C       +G  +H
Sbjct: 273 VVSWNSMIAAYAQSGRGREALE-LYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIH 331

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                  +  D+ +  ++++ Y+K   L  A   F  +   N  V+W++M+         
Sbjct: 332 SRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKN-AVTWSAMVGAFIQQGYD 390

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-QLKLGFSNNTIGVNA 408
                L+  M+    Q S  TL   L +C+   +L+ GK+IH   Q      N     N+
Sbjct: 391 REALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNS 450

Query: 409 LMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           L++MY  CG L  A   FS LQR     D+  WN +IV    +G   E +     M  Q 
Sbjct: 451 LLNMYAKCGCLAIANTMFSNLQR----RDSFSWNTIIVGHAHHGDVDEVLSLHGEMV-QD 505

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD VT   V+ AC                  S  GL  R ++  ++M G        
Sbjct: 506 GVDPDYVTFACVLLAC------------------SHAGLLDRGRSHFLSMTG-------- 539

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
               + C    L  + C++   S+      A  L   + F P  ++  ++L AC   G  
Sbjct: 540 ----DYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHGET 595

Query: 586 RHGKQIHGHVFHLGFQ 601
           + G +    +  LGF+
Sbjct: 596 KRGVEAARSLLELGFE 611


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 176/574 (30%), Positives = 296/574 (51%), Gaps = 40/574 (6%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLR 295
           MT + +  WN ++   +   ++EE   L H   + R  E PD  T+   +  C +   + 
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEV--LYHFSHMFRDEEKPDNFTLPVALKACGELREVN 58

Query: 296 EGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G  +HG+  + + LG DL + +SL+  Y K   + +A  +F+ +    D+V+W+SM+SG
Sbjct: 59  YGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVTWSSMVSG 117

Query: 355 L-----------FKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                       F   + + S  +    TL+ ++ +C    +   G+ +H + ++ GFSN
Sbjct: 118 FEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN 177

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +   VN+L++ Y        A +L + I+   D   W+ VI    QNG   EA+  F  M
Sbjct: 178 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVIACYVQNGAAAEALLVFNDM 236

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                  P+  T++ V+ AC       +G+  H LA++  +  + +V  AL+ MY +C  
Sbjct: 237 -MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 295

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILS 577
            + A  VF      ++ +W  +IS F+ N    R++E F  +  E    P+ I +V +L 
Sbjct: 296 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 355

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C++LG L   K  H +V   GF  N FI ++L+++YS C               K    
Sbjct: 356 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 415

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           W+S+I+ YG HGKG +A+E F+ M  S  ++P + + +S+LSACSH+GL+ EGL+ +  M
Sbjct: 416 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 475

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           + +Y + P  EH+  +VD+LGR G L  A E  K +P  P P + G +L AC  H + +M
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 535

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            + VA+ LF+LE  + GYY+ +SN+Y   G W++
Sbjct: 536 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 569



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 156/540 (28%), Positives = 262/540 (48%), Gaps = 37/540 (6%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           WNT++         E+ L +F  M    E+ DN +L  A+ A   L E++YG++IH   +
Sbjct: 9   WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGF-V 67

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           K        + V +SLI MY +CG +  A R F  +   D+V+W++++ GF  NG   +A
Sbjct: 68  KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 127

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
            +    M +   V PD  T++TL+S C      R GR VHG+ IRR    DL ++NSL++
Sbjct: 128 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 187

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
            Y+KS +  +A  LF  IA   D++SW+++I+             +F +M+   ++ + +
Sbjct: 188 CYAKSRAFKEAVNLFKMIAE-KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVA 246

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T+L +L +C +   LE G+  H   ++ G         AL+ MY+ C     A+++  RI
Sbjct: 247 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI 306

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               D   W  +I   T NG    +I+ F  M  + N  PD++ +V V+ +C  L    +
Sbjct: 307 PRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 365

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            K  H   +K     +  +  +L+ +Y RC  + +AS VF      +   W  +I+ +  
Sbjct: 366 AKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGI 425

Query: 550 NKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           +    +ALE F H+    E +PNE++ +SILSAC+  G++  G +I    F L       
Sbjct: 426 HGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKL------- 474

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
               +++ Y    +   ++ ++   G  G    AIE+   M  S   PT   + +LL AC
Sbjct: 475 ----MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS---PTPQILGTLLGAC 527



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 214/470 (45%), Gaps = 28/470 (5%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV- 65
           L   +SL+  Y        +L +F E    D+VTW++M++   +N      + FF  MV 
Sbjct: 77  LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVM 136

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
              +  D  TL+ +VSA T+++  + GR VH   I+ G   D SL N  +N YAK     
Sbjct: 137 ASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFK 196

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  +   D +SW+T+++  + N    + LL F +M   G + +  ++   + A A
Sbjct: 197 EAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACA 256

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
              +L  G+  H L I+ G E    V V+ +L+ MY +C   E A   F  +  KDVVSW
Sbjct: 257 AAHDLEQGRKTHELAIRKGLETE--VKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSW 314

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            A+I GF LNG    + +    M L  +  PD   +V ++  C++   L + +  H Y I
Sbjct: 315 VALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 374

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------- 355
           +     +  +  SL++ YS+  SL  A  +FN IA + D V W S+I+G           
Sbjct: 375 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA-LKDTVVWTSLITGYGIHGKGTKAL 433

Query: 356 --FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN----- 407
             F  M+     + +  T L+IL +C+    +  G  I     KL  ++  +  N     
Sbjct: 434 ETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEHYA 489

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
            L+ +    GDL  A  + +R+  +        ++ AC   QNG   E +
Sbjct: 490 VLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 3/298 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L    SLL  Y+    F+ ++ LF     KDV++W+ +I   V+N      L  
Sbjct: 173 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 232

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+++G   +  T+L ++ A    + L+QGR  H L+I+ G+  +  +    V+MY K
Sbjct: 233 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 292

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSS 179
           C     +   FS +   D VSW  ++SG   N    + +  F  M   +  + D + +  
Sbjct: 293 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 352

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + + + LG L   K  H+  IK G++ +P++    SL+ +YS+CG +  A + F G+  
Sbjct: 353 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA--SLVELYSRCGSLGNASKVFNGIAL 410

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           KD V W ++I G+ ++GK  +A +  + M     V+P+  T ++++S C+ + L+ EG
Sbjct: 411 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 468


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 194/627 (30%), Positives = 322/627 (51%), Gaps = 47/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+ +HA  IKL    S  + + NSLI+ Y++C  +  A+  F  +  KDV+SWN +I
Sbjct: 23  LQKGRALHAQIIKLA-SSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLI 81

Query: 250 DGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +G++  G    +F ++   Q MR+  + P+  T   + +  ++   +  G+  H  AI+ 
Sbjct: 82  NGYSQQGPTGSSF-VMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------- 354
              YD+ + +SL++ Y K+  L +A  +F+ +   N+ V+W +MISG             
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNE-VTWATMISGYAIQRLAGEAFEV 199

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L +      ++F+F+++L+ L     PE ++ GK IHC  +K G       +NAL+ M
Sbjct: 200 FELMRREEEDVNEFAFTSVLSALAV---PEFVDSGKQIHCLAVKTGLLVFLSILNALVTM 256

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  +  + + +S++ ++  W+ +I    Q+G   +A+K F  M      +P   
Sbjct: 257 YAKCGSLDDSLQVFE-MSNDKNSITWSAMITGYAQSGDSHKALKLFSRM-HFAGINPSEF 314

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFE 530
           TLV V++AC +     EGK +H   LK  +G +++  +  AL+ MY +    + A   F 
Sbjct: 315 TLVGVLNACSDACAVEEGKQVHNYLLK--LGFESQLYIMTALVDMYAKSGVTEDARKGFN 372

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                +L  W  MI+ + QN     AL L+  ++ E   PNE+++ S+L AC+ L     
Sbjct: 373 YLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQ 432

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           G+QIH      G      I SAL  MY+ C               +   +W++MIS    
Sbjct: 433 GRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQ 492

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G EA+ELF EM     +P   + +++LSACSH GLVD G  Y+  M +E+ + P+ E
Sbjct: 493 NGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVE 552

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+L R+GKL EA EFI++  I     +W  +L AC ++ + ++G    E L +L
Sbjct: 553 HYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMEL 612

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
             +    Y+ LS +Y ALGR +D   +
Sbjct: 613 GSQESSAYVLLSGIYTALGRPEDVERV 639



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 273/543 (50%), Gaps = 62/543 (11%)

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLC----NVFVNMYAKCGDLNSSECTFSGMHCAD 138
            T    L++GR +H   IK   +A SS C    N  +N YAKC  L  ++  F  +H  D
Sbjct: 17  FTHQKSLQKGRALHAQIIK---LASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKD 73

Query: 139 TVSWNTIMSGCLHNNYPEK-------CLLYFREMGWSGEQADNV-----SLSSAVAASAC 186
            +SWN     CL N Y ++        +  F+ M     +ADN+     + S    A++ 
Sbjct: 74  VISWN-----CLINGYSQQGPTGSSFVMELFQRM-----RADNILPNAHTFSGIFTAASN 123

Query: 187 LGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           L  + +G+  HA+ IK+  + D   V V +SL++MY + G +  A   F  M  ++ V+W
Sbjct: 124 LSSIFFGQQAHAVAIKMACFYD---VFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTW 180

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA--TVVTLISLCADSLLLREGRSVHGY 303
             +I G+A+     EAF++    +LMR  E D+      +++S  A    +  G+ +H  
Sbjct: 181 ATMISGYAIQRLAGEAFEVF---ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCL 237

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A++  L   L ++N+L+  Y+K  SL  +  +F      N  ++W++MI+G         
Sbjct: 238 AVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNS-ITWSAMITGYAQSGDSHK 296

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF  M +     S  TL+ +L +C+   ++E GK +H + LKLGF +    + AL+ 
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVD 356

Query: 412 MYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           MY   G   D    F+ LQ+     D   W  +I    QNG  ++A+  +  M Q +   
Sbjct: 357 MYAKSGVTEDARKGFNYLQQ----PDLVLWTSMIAGYVQNGENEDALSLYCRM-QMEGIL 411

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+ +T+ +V+ AC NL    +G+ +H   +K  +GL+  + +AL TMY +C +++  + V
Sbjct: 412 PNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIV 471

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVL 585
           F      ++ +WN MIS  SQN     ALELF   R  + +P++++ V++LSAC+ +G++
Sbjct: 472 FRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLV 531

Query: 586 RHG 588
             G
Sbjct: 532 DSG 534



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 268/556 (48%), Gaps = 28/556 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN----RCVVMGLHFFGEMV 65
           + SL+  Y+   +   +  +F    NKDV++WN +I    +        VM L  F  M 
Sbjct: 46  ANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMEL--FQRMR 103

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            + I  ++ T   I +A + ++ +  G+  H ++IK     D  + +  +NMY K G L 
Sbjct: 104 ADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLF 163

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   + V+W T++SG        +    F  M    E  +  + +S ++A A
Sbjct: 164 EAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALA 223

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
               +  GK IH L +K G     ++S+ N+L++MY++CG ++ + + F     K+ ++W
Sbjct: 224 VPEFVDSGKQIHCLAVKTGL--LVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITW 281

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           +A+I G+A +G   +A  L   M     + P   T+V +++ C+D+  + EG+ VH Y +
Sbjct: 282 SAMITGYAQSGDSHKALKLFSRMHFA-GINPSEFTLVGVLNACSDACAVEEGKQVHNYLL 340

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
           +      L +M +L+D Y+KS     A   FN +    DLV W SMI+G  +     + L
Sbjct: 341 KLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQ-QPDLVLWTSMIAGYVQNGENEDAL 399

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L  +           T+ ++L +C++  + + G+ IH   +K G        +AL  MY
Sbjct: 400 SLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMY 459

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG+L     + +R+    D   WN +I   +QNG+ +EA++ F+ M +QQ+  PD VT
Sbjct: 460 AKCGNLEEGNIVFRRMPER-DIISWNAMISGLSQNGYGKEALELFEEM-RQQDTKPDDVT 517

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
            VNV+SAC ++ L   G  L+   +    GL  +V++   ++ +  R   +  A    ES
Sbjct: 518 FVNVLSACSHMGLVDSG-WLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIES 576

Query: 532 -CYNCNLCTWNCMISA 546
              +  LC W  ++ A
Sbjct: 577 TTIDHGLCLWRILLGA 592



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L    +L+T Y+     + SL +F  + +K+ +TW+AMIT   ++      L  F
Sbjct: 242 GLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLF 301

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI     TL+ +++A +    +++G+ VH   +K G  +   +    V+MYAK 
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F+ +   D V W ++++G + N   E  L  +  M   G   + ++++S +
Sbjct: 362 GVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVL 421

Query: 182 AASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A + L     G+ IHA  IK  LG E    V++ ++L +MY++CG++E     F  M  
Sbjct: 422 KACSNLAAFDQGRQIHARTIKYGLGLE----VTIGSALSTMYAKCGNLEEGNIVFRRMPE 477

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +D++SWNA+I G + NG  +EA +L  EM+  +  +PD  T V ++S C+   L+  G
Sbjct: 478 RDIISWNAMISGLSQNGYGKEALELFEEMR-QQDTKPDDVTFVNVLSACSHMGLVDSG 534


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 333/633 (52%), Gaps = 48/633 (7%)

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            A A+ A L EL +G+++ A        DS       +L++  +   D+  A + F GM 
Sbjct: 25  DACASRAHLAEL-HGRLVRAHLTS----DSFVAGRLIALLASPAARHDMRYARKVFDGMA 79

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR--- 295
             +   WN +I G++      +A  +  EM+  R V PD  T+  ++S  A    L+   
Sbjct: 80  QPNAFVWNCMIRGYSSCEAPRDALAVFREMR-RRGVSPDNYTMAAVVSASAAFAGLKWRS 138

Query: 296 EGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            G ++H  A+ R +G+  D+ +M+ L+++Y    S+ +A  +F  +    D+VSW SMIS
Sbjct: 139 NGDAIH--ALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYE-RDVVSWTSMIS 195

Query: 354 -----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                G + ++L + S+           T++++L +C   ++++ G+ ++    K G   
Sbjct: 196 ACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +    NAL+ MY  CG L  A    Q +     T  WN +I    QN   +EA++ F+ M
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARY-TKSWNTLIDGFVQNHEHKEALRIFEEM 314

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 +PD +TLV+V+SAC  L    +G  +H     + +  D  + N+LI MY +C D
Sbjct: 315 LLH-GVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGD 373

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
           + +A  VF++    ++ +W  M+  + +      A  LF  +   E   +E+++VS+LSA
Sbjct: 374 MAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSA 433

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C+QLG L  G++IH ++  +   ++  + SAL+DMY+ C               K   +W
Sbjct: 434 CSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW 493

Query: 624 SSMISAYGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           ++MI     +G G EA+ELF +M      +P   ++ ++L AC+H G+VDEGL+Y+  ++
Sbjct: 494 NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY-LM 552

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
               V P+TEH+ CIVD+LGR+G L EA+ FIK +PI+P P +WG++L+AC  H    +G
Sbjct: 553 SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLG 612

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           K + + +  + P +VG ++ +SN++    +W D
Sbjct: 613 KVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDD 645



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 262/586 (44%), Gaps = 51/586 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F      +   WN MI            L  F EM   G+  D+ T+  +VSA      
Sbjct: 74  VFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAG 133

Query: 89  LK---QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           LK    G  +H L  + G  +D  + +  VN Y     +  +   F  M+  D VSW ++
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSM 193

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S C    + +K L    EM   G   + V++ S ++A      +  G+ ++    K G 
Sbjct: 194 ISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI 253

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           E    V + N+LISMY++CG +  A  AF  M  +   SWN +IDGF  N + +EA  + 
Sbjct: 254 EAD--VDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM L+  V PD  T+V+++S CA    LR+G  VH Y     +  D ++ NSL++ Y+K
Sbjct: 312 EEM-LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              ++ AE +F  +    D+VSW  M+ G            LF+EM           L++
Sbjct: 371 CGDMAAAERVFQTMTK-KDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVS 429

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C+   +L+ G+ IH +  ++  + +    +AL+ MY  CG +  A  + +++ H  
Sbjct: 430 LLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             S WN +I     NG+ +EA++ F  M + Q+  PD +TL  V+ AC ++ +  EG  L
Sbjct: 490 TLS-WNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEG--L 546

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
               L S +G+    ++                             + C++    +    
Sbjct: 547 RYFYLMSSLGVVPDTEH-----------------------------YGCIVDLLGRAGML 577

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
             A    + +  EPN +   S+L+AC     +  GK I  H+ ++ 
Sbjct: 578 DEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVA 623



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 228/460 (49%), Gaps = 23/460 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +   + L+  Y      + +  +F E   +DVV+W +MI+AC +       L   
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI  +  T++ ++SA  Q   + +GR V+    K G+ AD  + N  ++MY KC
Sbjct: 211 SEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKC 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F  M    T SWNT++ G + N+  ++ L  F EM   G   D ++L S +
Sbjct: 271 GCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL 330

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMT 238
           +A A LGEL  G  +H+       +D+       +TNSLI+MY++CGD+ AAER F  MT
Sbjct: 331 SACAQLGELRKGMHVHSY-----IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVVSW  ++ G+    +F  AF+L  EM++   V  ++A +V+L+S C+    L +GR
Sbjct: 386 KKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMA-LVSLLSACSQLGALDKGR 444

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H Y     +  DL + ++L+D Y+K   +  A  +F  +     L SWN+MI G    
Sbjct: 445 EIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL-SWNAMIGGLASN 503

Query: 355 --------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   LF +ML L   +    TL A+L +C     ++ G         LG   +T  
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEH 563

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
              ++ +    G L  AF  ++++    +   W  ++ AC
Sbjct: 564 YGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAAC 603



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 155/602 (25%), Positives = 275/602 (45%), Gaps = 47/602 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCG---DLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           +H   ++A + +DS +    + + A      D+  +   F GM   +   WN ++ G   
Sbjct: 36  LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLGYEDS 208
              P   L  FREM   G   DN ++++ V+ASA    L +   G  IHAL  ++G+   
Sbjct: 96  CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V + L++ Y     ++ A + F  M  +DVVSW ++I   A  G +++   +L EM
Sbjct: 156 --VFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEM 213

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    + P+  T+++L+S C  +  + EGR V+    +  +  D+ + N+L+  Y+K   
Sbjct: 214 Q-AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGC 272

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           LS A   F A+ P     SWN++I G            +F+EML         TL+++L 
Sbjct: 273 LSDALEAFQAM-PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLS 331

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C     L  G  +H +    G   + I  N+L++MY  CGD+ AA  + Q ++   D  
Sbjct: 332 ACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT-KKDVV 390

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W +++    +   F  A   F+ M   +  + + + LV+++SAC  L    +G+ +H  
Sbjct: 391 SWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHE-MALVSLLSACSQLGALDKGREIHSY 449

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +  +  D  +++AL+ MY +C  I +AS +F    +    +WN MI   + N     A
Sbjct: 450 IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEA 509

Query: 557 LELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           +ELF  +    + +P+ I++ ++L AC  +G++  G +    +  LG   ++     ++D
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVD 569

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
           +                    G+     E FH +    I P      SLL+AC     +D
Sbjct: 570 LL-------------------GRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMD 610

Query: 673 EG 674
            G
Sbjct: 611 LG 612


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 333/633 (52%), Gaps = 48/633 (7%)

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            A A+ A L EL +G+++ A        DS       +L++  +   D+  A + F GM 
Sbjct: 25  DACASRAHLAEL-HGRLVRAHLTS----DSFVAGRLIALLASPAARHDMRYARKVFDGMA 79

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR--- 295
             +   WN +I G++      +A  +  EM+  R V PD  T+  ++S  A    L+   
Sbjct: 80  QPNAFVWNCMIRGYSSCEAPRDALAVFREMR-RRGVSPDNYTMAAVVSASAAFAGLKWRS 138

Query: 296 EGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            G ++H  A+ R +G+  D+ +M+ L+++Y    S+ +A  +F  +    D+VSW SMIS
Sbjct: 139 NGDAIH--ALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYE-RDVVSWTSMIS 195

Query: 354 -----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                G + ++L + S+           T++++L +C   ++++ G+ ++    K G   
Sbjct: 196 ACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +    NAL+ MY  CG L  A    Q +     T  WN +I    QN   +EA++ F+ M
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARY-TKSWNTLIDGFVQNHEHKEALRIFEEM 314

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                 +PD +TLV+V+SAC  L    +G  +H     + +  D  + N+LI MY +C D
Sbjct: 315 LLH-GVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGD 373

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
           + +A  VF++    ++ +W  M+  + +      A  LF  +   E   +E+++VS+LSA
Sbjct: 374 MAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSA 433

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C+QLG L  G++IH ++  +   ++  + SAL+DMY+ C               K   +W
Sbjct: 434 CSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSW 493

Query: 624 SSMISAYGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           ++MI     +G G EA+ELF +M      +P   ++ ++L AC+H G+VDEGL+Y+  ++
Sbjct: 494 NAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFY-LM 552

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
               V P+TEH+ CIVD+LGR+G L EA+ FIK +PI+P P +WG++L+AC  H    +G
Sbjct: 553 SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLG 612

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           K + + +  + P +VG ++ +SN++    +W D
Sbjct: 613 KVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDD 645



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/586 (26%), Positives = 262/586 (44%), Gaps = 51/586 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F      +   WN MI            L  F EM   G+  D+ T+  +VSA      
Sbjct: 74  VFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAG 133

Query: 89  LK---QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           LK    G  +H L  + G  +D  + +  VN Y     +  +   F  M+  D VSW ++
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSM 193

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S C    + +K L    EM   G   + V++ S ++A      +  G+ ++    K G 
Sbjct: 194 ISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI 253

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           E    V + N+LISMY++CG +  A  AF  M  +   SWN +IDGF  N + +EA  + 
Sbjct: 254 EAD--VDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIF 311

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM L+  V PD  T+V+++S CA    LR+G  VH Y     +  D ++ NSL++ Y+K
Sbjct: 312 EEM-LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              ++ AE +F  +    D+VSW  M+ G            LF+EM           L++
Sbjct: 371 CGDMAAAERVFQTMTK-KDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVS 429

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C+   +L+ G+ IH +  ++  + +    +AL+ MY  CG +  A  + +++ H  
Sbjct: 430 LLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQ 489

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             S WN +I     NG+ +EA++ F  M + Q+  PD +TL  V+ AC ++ +  EG  L
Sbjct: 490 TLS-WNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEG--L 546

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
               L S +G+    ++                             + C++    +    
Sbjct: 547 RYFYLMSSLGVVPDTEH-----------------------------YGCIVDLLGRAGML 577

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
             A    + +  EPN +   S+L+AC     +  GK I  H+ ++ 
Sbjct: 578 DEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVA 623



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 228/460 (49%), Gaps = 23/460 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +   + L+  Y      E +  +F E   +DVV+W +MI+AC +       L   
Sbjct: 151 GFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKML 210

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI  +  T++ ++SA  Q   + +GR V+    K G+ AD  + N  ++MY KC
Sbjct: 211 SEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKC 270

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F  M    T SWNT++ G + N+  ++ L  F EM   G   D ++L S +
Sbjct: 271 GCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL 330

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMT 238
           +A A LGEL  G  +H+       +D+       +TNSLI+MY++CGD+ AAER F  MT
Sbjct: 331 SACAQLGELRKGMHVHSY-----IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT 385

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVVSW  ++ G+    +F  AF+L  EM++   V  ++A +V+L+S C+    L +GR
Sbjct: 386 KKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMA-LVSLLSACSQLGALDKGR 444

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H Y     +  DL + ++L+D Y+K   +  A  +F  +     L SWN+MI G    
Sbjct: 445 EIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL-SWNAMIGGLASN 503

Query: 355 --------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   LF +ML L   +    TL A+L +C     ++ G         LG   +T  
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEH 563

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
              ++ +    G L  AF  ++++    +   W  ++ AC
Sbjct: 564 YGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAAC 603



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 275/602 (45%), Gaps = 47/602 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCG---DLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           +H   ++A + +DS +    + + A      D+  +   F GM   +   WN ++ G   
Sbjct: 36  LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLGYEDS 208
              P   L  FREM   G   DN ++++ V+ASA    L +   G  IHAL  ++G+   
Sbjct: 96  CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V + L++ Y     +E A + F  M  +DVVSW ++I   A  G +++   +L EM
Sbjct: 156 --VFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEM 213

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q    + P+  T+++L+S C  +  + EGR V+    +  +  D+ + N+L+  Y+K   
Sbjct: 214 Q-AEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGC 272

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           LS A   F A+ P     SWN++I G            +F+EML         TL+++L 
Sbjct: 273 LSDALEAFQAM-PARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLS 331

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C     L  G  +H +    G   + I  N+L++MY  CGD+ AA  + Q ++   D  
Sbjct: 332 ACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMT-KKDVV 390

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W +++    +   F  A   F+ M   +  + + + LV+++SAC  L    +G+ +H  
Sbjct: 391 SWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHE-MALVSLLSACSQLGALDKGREIHSY 449

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +  +  D  +++AL+ MY +C  I +AS +F    +    +WN MI   + N     A
Sbjct: 450 IEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEA 509

Query: 557 LELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           +ELF  +    + +P+ I++ ++L AC  +G++  G +    +  LG   ++     ++D
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIVD 569

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
           +                    G+     E FH +    I P      SLL+AC     +D
Sbjct: 570 LL-------------------GRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMD 610

Query: 673 EG 674
            G
Sbjct: 611 LG 612


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 177/539 (32%), Positives = 278/539 (51%), Gaps = 40/539 (7%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  TV  LI   A +  L +G+ +H   IR     +  + N  ++ YSK   L     LF
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 337 NAIAPMNDLVSWNSMISGL-----FKEML----------YLCSQFSFSTLLAILPSCNSP 381
           + ++  N +VSW S+I+G      F+E L           + +QF+ S+   +L +C S 
Sbjct: 134 DKMSQRN-MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSS---VLQACTSL 189

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +++FG  +HC  +K GF       + L  MY  CG+L  A    + +    D   W  +
Sbjct: 190 GAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP-CKDAVLWTSM 248

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    +NG F++A+  +  M    +   D   L + +SAC  L+ +  GKSLH   LK  
Sbjct: 249 IDGFVKNGDFKKALTAYMKMVTD-DVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG 307

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELF 560
              +T + NAL  MY +  D+ SAS VF+   +C ++ +   +I  + +     +AL  F
Sbjct: 308 FEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTF 367

Query: 561 ---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
              R    EPNE +  S++ AC     L HG Q+HG V    F+ + F+SS L+DMY  C
Sbjct: 368 VDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKC 427

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                              AW++++  +  HG G  AIE F+ M + G++P   + ++LL
Sbjct: 428 GLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLL 487

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
             CSH+G+V++GL Y+++M + Y V P+ EH+ C++D+LGR+GKL+EA +FI N+P +P 
Sbjct: 488 KGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPN 547

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              W + L AC  HGD +  K  A+ L KLEPEN G ++ LSN+Y    +W+D   + K
Sbjct: 548 VFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRK 606



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 159/624 (25%), Positives = 280/624 (44%), Gaps = 91/624 (14%)

Query: 59  HFFGEMVEEGIRF--------------DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM 104
           HF  E VEE I F              D+ T+  ++    +   L +G+ +H + I+ G 
Sbjct: 47  HFVLEGVEEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGC 106

Query: 105 IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
           + ++ L N F+N+Y+KCG+L+ +   F  M   + VSW +I++G  HN+  ++ L  F +
Sbjct: 107 LPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQ 166

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M   GE A   +LSS + A   LG + +G  +H L +K G+    +V   ++L  MYS+C
Sbjct: 167 MRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVG--SNLTDMYSKC 224

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G++  A +AF  M CKD V W ++IDGF  NG F++A     +M +   V  D   + + 
Sbjct: 225 GELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKM-VTDDVFIDQHVLCST 283

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +S C+       G+S+H   ++    Y+  + N+L D YSKS  +  A  +F   +    
Sbjct: 284 LSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCIS 343

Query: 345 LVSWNSMISGLFKEMLYL----------------CSQFSFSTLLAILPSCNSPESLEFGK 388
           +VS  ++I G + EM  +                 ++F+F++L   + +C +   LE G 
Sbjct: 344 IVSLTAIIDG-YVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL---IKACANQAKLEHGS 399

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H   +K  F  +    + L+ MY  CG    +  L   I  N D   WN ++   +Q+
Sbjct: 400 QLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQH 458

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  + AI+TF  M   +   P++VT VN++  C +  +  +G +    +++ + G+  + 
Sbjct: 459 GLGRNAIETFNGMI-HRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFS-SMEKIYGVVPKE 516

Query: 509 QN--ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
           ++   +I + GR   +K A                                +   ++ FE
Sbjct: 517 EHYSCVIDLLGRAGKLKEAE-------------------------------DFINNMPFE 545

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSM 626
           PN     S L AC          +IHG +     +   F +  L+ +      N+    +
Sbjct: 546 PNVFGWCSFLGAC----------KIHGDM-----ERAKFAADKLMKLEP---ENSGAHVL 587

Query: 627 ISAYGYHGKGWEAIELFHEMCNSG 650
           +S      K WE ++   +M   G
Sbjct: 588 LSNIYAKEKQWEDVQSLRKMIKDG 611



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L +   S   L  YS     + ++ LF +   +++V+W ++IT    N      L  F
Sbjct: 105 GCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSF 164

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG       L  ++ A T +  ++ G  VHCL +K G   +  + +   +MY+KC
Sbjct: 165 CQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKC 224

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+ +   F  M C D V W +++ G + N   +K L  + +M       D   L S +
Sbjct: 225 GELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTL 284

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
           +A + L   S+GK +HA  +KLG+E   ++   N+L  MYS+ GD+ +A   F   + C 
Sbjct: 285 SACSALKASSFGKSLHATILKLGFEYETFIG--NALTDMYSKSGDMVSASNVFQIHSDCI 342

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +VS  AIIDG+    + E+A     +++  R +EP+  T  +LI  CA+   L  G  +
Sbjct: 343 SIVSLTAIIDGYVEMDQIEKALSTFVDLR-RRGIEPNEFTFTSLIKACANQAKLEHGSQL 401

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
           HG  ++     D  + ++L+D Y K      +  LF+ I    D ++WN+++ G+F +
Sbjct: 402 HGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN-PDEIAWNTLV-GVFSQ 457


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 323/625 (51%), Gaps = 70/625 (11%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG---DIEAAERAFWGMTCKDVVSWNAII 249
           GK IH   I  GY    Y+     ++ +Y++ G   D+  A + F  M  +++ +WN +I
Sbjct: 90  GKSIHTQMISNGYNPDAYL--MTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMI 147

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +A    + EA+ +   M L   V PD  T  + + +C        G+ VH   I    
Sbjct: 148 LAYARVDDYMEAWGIFDRM-LKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGF 206

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL-- 362
             D  + N+L+D Y+K +       +F+ +   N  V+WNS+IS     G F + L L  
Sbjct: 207 KGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ-VTWNSIISAEAQFGHFNDALVLFL 265

Query: 363 ----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                       QF+F+TLL +   C +  +   G+ IH   ++   + N I    L+HM
Sbjct: 266 RMQESEDGIQPDQFTFTTLLTL---CANQRNDNQGRQIHAHLIRANITKNIIVETELVHM 322

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A  +  R++  +  S WN +I    QNG  QEA++ FK M Q     PD  
Sbjct: 323 YSECGRLNYAKEIFNRMAERNAYS-WNSMIEGYQQNGETQEALRLFKQM-QLNGIKPDCF 380

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           +L +++S+C +L  + +G+ LH   +++ M  +  +Q  L+ MY +C  +  A  V++  
Sbjct: 381 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT 440

Query: 533 Y--NCNLCTWNCMISAFSQNKAEVRALELFRH-LEFEPNEISIVSILSACTQLGVLRHGK 589
              + N   WN +++ ++ NK   +  E F H LE   ++I    +L+  T + +L    
Sbjct: 441 IKKDRNTALWNSILAGYA-NKGLKK--ESFNHFLEMLESDIE-YDVLTMVTIVNLL---- 492

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
                           + +AL+DMYS C               K+  +W++MIS Y  HG
Sbjct: 493 ---------------VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHG 537

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              EA+ L+ EM   G+ P + + +++LSACSH+GLV+EGL+ + +M E+Y++  + EH+
Sbjct: 538 CSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHY 597

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGR+G+L++A EF++ +PI+P+   WGA+L AC  H D  MG+  A+ LF+L+P
Sbjct: 598 TCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDP 657

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
           +N G Y+ +SN+Y A GRWK+  +I
Sbjct: 658 QNPGPYVIMSNIYAAAGRWKEVEDI 682



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 244/552 (44%), Gaps = 66/552 (11%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS---NSLSKAELLFNAI 339
           +LI  C DS   + G+S+H   I      D  +M  ++  Y++S   + L  A  LF  +
Sbjct: 76  SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEM 135

Query: 340 APMNDLVSWNSMIS------------GLFKEMLYL---CSQFSFSTLLAILPSCNSPESL 384
            P  +L +WN+MI             G+F  ML +      F+F++ L +   C +  S 
Sbjct: 136 -PERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV---CGALRSR 191

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           + GK +H   +  GF  +T   NAL+ MY  C D  +   +   +   +  + WN +I A
Sbjct: 192 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT-WNSIISA 250

Query: 445 CTQNGHFQEAIKTFKSMTQQQNA-SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
             Q GHF +A+  F  M + ++   PD  T   +++ C N     +G+ +H   +++ + 
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V+  L+ MY  C  +  A  +F      N  +WN MI  + QN     AL LF+ +
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 370

Query: 564 EF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
           +    +P+  S+ S+LS+C  L   + G+++H  +     +E   +   L+DMY+ C   
Sbjct: 371 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 430

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP---TKSSVIS 660
                         ++ A W+S+++ Y   G   E+   F EM  S I     T  ++++
Sbjct: 431 DYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 490

Query: 661 LL-------SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA--- 710
           LL          S  G + +    ++NM  +  V         ++    + G  +EA   
Sbjct: 491 LLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWN-----AMISGYSKHGCSKEALIL 545

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMY 767
           YE +    + P    + A+LSACSH G  + G ++   +   + +E +   +Y  + ++ 
Sbjct: 546 YEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAK-AEHYTCMVDLL 604

Query: 768 VALGRWKDAVEI 779
              GR +DA E 
Sbjct: 605 GRAGRLEDAKEF 616



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 135/556 (24%), Positives = 256/556 (46%), Gaps = 26/556 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF E   +++  WN MI A       +     F  M++ G+  D+ T    +     +  
Sbjct: 131 LFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRS 190

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
              G+ VH   I  G   D+ + N  ++MYAKC D  S    F  M   + V+WN+I+S 
Sbjct: 191 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 250

Query: 149 CLHNNYPEKCLLYFREMGWS--GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
                +    L+ F  M  S  G Q D  + ++ +   A     + G+ IHA  I+    
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            +  + V   L+ MYS+CG +  A+  F  M  ++  SWN++I+G+  NG+ +EA  L  
Sbjct: 311 KN--IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 368

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +MQL   ++PD  ++ +++S C      ++GR +H + +R  +  + ++   L+D Y+K 
Sbjct: 369 QMQL-NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKC 427

Query: 327 NSLSKAELLFN-AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            S+  A  +++  I    +   WNS+++G   + L    + SF+  L +L S    + L 
Sbjct: 428 GSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGL---KKESFNHFLEMLESDIEYDVLT 484

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
               ++   L+           AL+ MY  CG +  A ++   ++  +  S WN +I   
Sbjct: 485 MVTIVNLLVLE----------TALVDMYSKCGAITKARTVFDNMNGKNIVS-WNAMISGY 533

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +++G  +EA+  ++ M  ++   P+ VT + ++SAC +  L  EG  +   +++    ++
Sbjct: 534 SKHGCSKEALILYEEMP-KKGMYPNEVTFLAILSACSHTGLVEEGLRIF-TSMQEDYNIE 591

Query: 506 TRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFR 561
            + ++   ++ + GR   ++ A    E       + TW  ++ A   +K  ++  L   R
Sbjct: 592 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 651

Query: 562 HLEFEPNEISIVSILS 577
             E +P       I+S
Sbjct: 652 LFELDPQNPGPYVIMS 667



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 231/504 (45%), Gaps = 57/504 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE----NRCVVMG 57
           GF        +L+  Y+     ES L +F E   ++ VTWN++I+A  +    N  +V+ 
Sbjct: 205 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 264

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L    +  E+GI+ D  T   +++         QGR +H   I+A +  +  +    V+M
Sbjct: 265 LRM--QESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM 322

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y++CG LN ++  F+ M   +  SWN+++ G   N   ++ L  F++M  +G + D  SL
Sbjct: 323 YSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSL 382

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           SS +++   L +   G+ +H   ++   E+   + V   L+ MY++CG ++ A + +   
Sbjct: 383 SSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV--LVDMYAKCGSMDYAWKVYDQT 440

Query: 238 TCKD--VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
             KD     WN+I+ G+A  G  +E+F+   EM L   +E D+ T+VT+++L        
Sbjct: 441 IKKDRNTALWNSILAGYANKGLKKESFNHFLEM-LESDIEYDVLTMVTIVNL-------- 491

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
                            L++  +L+D YSK  +++KA  +F+ +   N +VSWN+MISG 
Sbjct: 492 -----------------LVLETALVDMYSKCGAITKARTVFDNMNGKN-IVSWNAMISGY 533

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNN 402
                      L++EM       +  T LAIL +C+    +E G  I    Q        
Sbjct: 534 SKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAK 593

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ----EAIKTF 458
                 ++ +    G L  A   ++++    + S W  ++ AC  +         A + F
Sbjct: 594 AEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLF 653

Query: 459 KSMTQQQNASPDSVTLVNVISACG 482
           +     QN  P  V + N+ +A G
Sbjct: 654 E--LDPQNPGP-YVIMSNIYAAAG 674



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 55/266 (20%), Positives = 97/266 (36%), Gaps = 54/266 (20%)

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNC-------- 617
           N +   S++  C      + GK IH  +   G+  ++++ + +L +Y  S C        
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   ++  AW++MI AY       EA  +F  M   G+ P   +  S L  C    
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189

Query: 670 LVDEGLQYY---------------NNMLEEYDVRPETEHHVCIVDMLGRS---------- 704
             D G Q +               N +++ Y    + E  + + D +G            
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249

Query: 705 -----GKLQEAYEFIKNLP-----IQPKPGVWGAMLSACSHHGDTKMGKQV-AELLFKLE 753
                G   +A      +      IQP    +  +L+ C++  +   G+Q+ A L+    
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 309

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
            +N+     L +MY   GR   A EI
Sbjct: 310 TKNIIVETELVHMYSECGRLNYAKEI 335


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/599 (30%), Positives = 308/599 (51%), Gaps = 35/599 (5%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S   SLI  +   G ++ A  AF G+T       N +I GFA      +A      M L 
Sbjct: 55  SRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAM-LD 113

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
               PD  T   ++  CA +  L EGR+ H   I+  LG D+   NSL+  Y+K   +  
Sbjct: 114 AGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGD 173

Query: 332 AELLFNAIAPMNDLVSWNSMISGL------------FKEM-LYLCSQFSFSTLLAILPSC 378
           AE +F+ + P  D+VSWN+M+ G             F+EM   L        ++A L +C
Sbjct: 174 AERVFDGM-PARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAAC 232

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               +L  G+ IH + ++ G   +     +L+ MY  CG++  A ++  ++   +  + W
Sbjct: 233 CLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVT-W 291

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I     N    +A   F  M +      + VT +N+++AC   E +  G+S+H   +
Sbjct: 292 NCMIGGYALNERPVDAFDCFMQM-RVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVV 350

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +        ++ AL+ MYG+   ++S+  +F    +  L +WN MI+A+   +    A+ 
Sbjct: 351 RRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIA 410

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  L      P+  ++ +++ A   LG +R  KQ+H ++  LG+ +++ I +A++ MY+
Sbjct: 411 LFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYA 470

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K   +W+++I  Y  HG+G  A+E+F EM  SG+ P +S+ +S
Sbjct: 471 RCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVS 530

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +L+ACS SGL  EG + +N+M +EY + P+ EH+ C+ D+LGR+G+L+E   FI+N+PI 
Sbjct: 531 VLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIA 590

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P   +WG++L+A  +  D  + +  AE +F+LE  N G Y+ LS+MY   GRW+D   I
Sbjct: 591 PTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERI 649



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 162/584 (27%), Positives = 276/584 (47%), Gaps = 24/584 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+ ++      + +   F           N MI    +    +  L  +  M++ G R 
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T  +++    +   L +GR  H   IK G+ AD    N  V +YAK G +  +E  F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLGEL 190
            GM   D VSWNT++ G + N      L  FREM  + +   D+V + +A+AA      L
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + G+ IH   I+ G E    V V  SL+ MY +CG++  AE  F  M  + VV+WN +I 
Sbjct: 239 ALGREIHGYAIRHGLEQD--VKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIG 296

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+ALN +  +AFD   +M++    + ++ T + L++ CA +     GRSVH Y +RR   
Sbjct: 297 GYALNERPVDAFDCFMQMRV-DGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFL 355

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKE 358
             +++  +L++ Y K   +  +E +F  I     LVSWN+MI+             LF E
Sbjct: 356 PHVVLETALLEMYGKVGKVESSEKIFGQITD-KTLVSWNNMIAAYMYMEMYQEAIALFLE 414

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +L       + T+  ++P+     S+   K +H + +KLG+ ++T+ +NA+MHMY  CG+
Sbjct: 415 LLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGN 474

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +VA+  +  ++    D   WN +I+    +G  + A++ F  M +     P+  T V+V+
Sbjct: 475 IVASREIFDKMP-GKDVISWNTIIIGYAIHGQGKIALEMFDEM-KCSGMEPNESTFVSVL 532

Query: 479 SACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +AC    L  EG K  + +  +  M         +  + GR  +++      E+      
Sbjct: 533 TACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPT 592

Query: 538 CT-WNCMISAFSQNKAEVRALELF--RHLEFEPNEISIVSILSA 578
              W  +++A S+NK ++   E    R  + E N      +LS+
Sbjct: 593 SRIWGSLLTA-SRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSS 635



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 233/486 (47%), Gaps = 20/486 (4%)

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           +   G ++ +   F+G+        N ++ G    + P   L  +R M  +G + D  + 
Sbjct: 64  HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTF 123

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
              +   A  G L  G+  HA  IKLG     Y +  NSL+++Y++ G +  AER F GM
Sbjct: 124 PVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTA--NSLVALYAKLGLVGDAERVFDGM 181

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +D+VSWN ++DG+  NG    A     EM     V  D   V+  ++ C     L  G
Sbjct: 182 PARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALG 241

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           R +HGYAIR  L  D+ +  SL+D Y K  ++  AE +F A  P+  +V+WN MI G   
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVF-AKMPLRTVVTWNCMIGGYAL 300

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F +M     Q    T + +L +C   ES  FG+S+H + ++  F  + + 
Sbjct: 301 NERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+ MY   G + ++  +  +I+  +  S WN +I A      +QEAI  F  +  Q 
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVS-WNNMIAAYMYMEMYQEAIALFLELLNQP 419

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PD  T+  V+ A   L    + K +H   +K   G  T + NA++ MY RC +I ++
Sbjct: 420 -LYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVAS 478

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
             +F+     ++ +WN +I  ++ +     ALE+F  ++    EPNE + VS+L+AC+  
Sbjct: 479 REIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVS 538

Query: 583 GVLRHG 588
           G+   G
Sbjct: 539 GLEAEG 544



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 215/457 (47%), Gaps = 18/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A + T+ SL+  Y+ +     +  +F     +D+V+WN M+   V N    + L  F
Sbjct: 150 GLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACF 209

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM +   +  DS  ++  ++A    + L  GR +H  +I+ G+  D  +    V+MY K
Sbjct: 210 REMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCK 269

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++  +E  F+ M     V+WN ++ G   N  P      F +M   G Q + V+  + 
Sbjct: 270 CGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINL 329

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A      +G+ +HA  ++  +   P+V +  +L+ MY + G +E++E+ F  +T K
Sbjct: 330 LTACAQTESSLFGRSVHAYVVRRHF--LPHVVLETALLEMYGKVGKVESSEKIFGQITDK 387

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +VSWN +I  +     ++EA  L  E+ L + + PD  T+ T++        +R+ + +
Sbjct: 388 TLVSWNNMIAAYMYMEMYQEAIALFLEL-LNQPLYPDYFTMTTVVPAFVLLGSIRQCKQM 446

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y ++   G   L+MN++M  Y++  ++  +  +F+ + P  D++SWN++I G      
Sbjct: 447 HSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKM-PGKDVISWNTIIIGYAIHGQ 505

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCN-SPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                 +F EM     + + ST +++L +C+ S    E  K  +  Q + G         
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYG 565

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
            +  +    G+L      ++ +     +  W  ++ A
Sbjct: 566 CMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 93/188 (49%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R FL H+   T+LL  Y  V   ESS  +F +  +K +V+WN MI A +        +  
Sbjct: 352 RHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIAL 411

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++ + +  D  T+  +V A   +  ++Q + +H   +K G    + + N  ++MYA+
Sbjct: 412 FLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYAR 471

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ +S   F  M   D +SWNTI+ G   +   +  L  F EM  SG + +  +  S 
Sbjct: 472 CGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSV 531

Query: 181 VAASACLG 188
           + A +  G
Sbjct: 532 LTACSVSG 539


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/657 (29%), Positives = 334/657 (50%), Gaps = 41/657 (6%)

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E C  Y  +M  +G Q  + +L  ++  +     + +GK IHA  +K G++     S  N
Sbjct: 32  EACSRY-HQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDS--LTSTGN 88

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           S++  Y + G +++A   F  M  +D VSWN +I G    G  ++      + +++ + E
Sbjct: 89  SVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVI-AFE 147

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P+++T+V  I  C     + EG  +HGY IR        + NSL+  Y+  N + +AE L
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA-DNDMERAEEL 206

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPSCNSPE 382
           F+ +    D++SW+ MI G            LF EM    S +    T++++L +C +  
Sbjct: 207 FDEMCE-RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG 265

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +  G+S+H   +  G   +    N+++ MY  C D  +AF     +    +T  WN +I
Sbjct: 266 DISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCR-NTVSWNSII 324

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               +     EA+  F SM +      D VTLVN++ +C      F+ K +H + ++   
Sbjct: 325 SGLVRTEKHSEALSLFYSMGKA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY 383

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            L+  V N+LI  Y +C  I+ A  +F+     +  +W+ MI+ F+       A+ LF+ 
Sbjct: 384 ELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 443

Query: 563 L---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +   + +PN ++I+S+L A +    L+  K  HG     G      + +A+LDMY+ C  
Sbjct: 444 MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGE 503

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K+  +W +MI+A G +G   +A+ L  EM   G++P   + +S+LSA
Sbjct: 504 IGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSA 563

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP--IQPK 722
           CSH GLV+EGL ++ NM++++ V P  EH+ C+VDML R+GKL  A   I+ +P  ++  
Sbjct: 564 CSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDG 623

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            G+WGA+LSAC   G++++G   A  + +LEP++   Y   S+MY A G W DA  +
Sbjct: 624 AGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARM 680



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 186/627 (29%), Positives = 299/627 (47%), Gaps = 43/627 (6%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M + G +    TL+  +        ++ G+ +H   +K G  + +S  N  ++ Y K
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMK 96

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L+S+   F  M   D+VSWN ++ G L     +K L +FR+      + +  +L  A
Sbjct: 97  TGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLA 156

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LG +  G  +H   I+ G+ D P  SV NSL+SMY+   D+E AE  F  M  +
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIP--SVQNSLLSMYAD-NDMERAEELFDEMCER 213

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV+SW+ +I G+   G+ + A  L  EM    S+E D  T+V+++  CA++  +  GRSV
Sbjct: 214 DVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSV 273

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
           HG  I R L YDL + NS++D YSK +    A   FN + P  + VSWNS+ISGL +   
Sbjct: 274 HGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEM-PCRNTVSWNSIISGLVRTEK 332

Query: 358 -----EMLYLCSQFSFS----TLLAILPSCN---SPESLEFGKSIHCWQLKLGFSNNTIG 405
                 + Y   +  F     TL+ +L SC     P   +F   IH   ++ G+  N   
Sbjct: 333 HSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHSIVIRWGYELNEFV 389

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           +N+L+  Y  C  +  A+ L  R+    DT  W+ +I      G   EAI  F+ M Q Q
Sbjct: 390 INSLIDAYSKCDLIELAWKLFDRLK-TKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQ 448

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P+ VT+++++ A          K  HG+A++  +  +  V  A++ MY +C +I  +
Sbjct: 449 E-KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLS 507

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
              F+     N+ +W  MI+A   N     AL L   ++    +PN ++ +S+LSAC+  
Sbjct: 508 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHG 567

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G         L F EN      ++  +        +S M+      GK   A+ L
Sbjct: 568 GLVEEG---------LSFFEN------MVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNL 612

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSG 669
             +M    +R       +LLSAC  SG
Sbjct: 613 IEKMPER-MRDGAGLWGALLSACRSSG 638



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 39/474 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL       SLL+ Y++ +  E +  LF E C +DV++W+ MI   V+     M L  F
Sbjct: 180 GFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLF 238

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM     I  D  T++ ++ A      +  GR VH + I  G+  D  + N  ++MY+K
Sbjct: 239 LEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSK 298

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C D  S+   F+ M C +TVSWN+I+SG +      + L  F  MG +G +AD V+L + 
Sbjct: 299 CDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNL 358

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +     +    K IH++ I+ GYE + +  V NSLI  YS+C  IE A + F  +  K
Sbjct: 359 LQSCKYFVDPFQCKFIHSIVIRWGYELNEF--VINSLIDAYSKCDLIELAWKLFDRLKTK 416

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSW+A+I GF   GK +EA  L  EM   +  +P+  T+++L+   + S  L+  +  
Sbjct: 417 DTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE-KPNGVTILSLLEAFSVSADLKRSKWA 475

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HG AIRR L  ++ +  +++D Y+K   +  +   F+ I P  ++VSW +MI+     GL
Sbjct: 476 HGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI-PEKNIVSWGAMIAACGMNGL 534

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI---G 405
            ++ L L S+           T L++L +C+    +E G         L F  N +   G
Sbjct: 535 ARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG---------LSFFENMVQDHG 585

Query: 406 VNA-------LMHMYINCGDLVAAFSLLQRISH--NSDTSCWNIVIVACTQNGH 450
           V         ++ M    G L +A +L++++          W  ++ AC  +G+
Sbjct: 586 VEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGN 639



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 161/589 (27%), Positives = 279/589 (47%), Gaps = 31/589 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +   T  S+L  Y      +S+L +F    ++D V+WN MI   +       GL +
Sbjct: 78  QGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWW 137

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +        + +TL++ + A   +  +++G  +H   I++G +   S+ N  ++MYA 
Sbjct: 138 FRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD 197

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
             D+  +E  F  M   D +SW+ ++ G +     +  L  F EM  +   + D +++ S
Sbjct: 198 -NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVS 256

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A  G++S G+ +H + I  G +   +V   NS+I MYS+C D E+A +AF  M C
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVG--NSIIDMYSKCDDHESAFKAFNEMPC 314

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ VSWN+II G     K  EA  L + M        D  T+V L+  C   +   + + 
Sbjct: 315 RNTVSWNSIISGLVRTEKHSEALSLFYSMG-KAGFRADEVTLVNLLQSCKYFVDPFQCKF 373

Query: 300 VHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +H   IR   GY+L   ++NSL+D YSK + +  A  LF+ +    D VSW++MI+G   
Sbjct: 374 IHSIVIR--WGYELNEFVINSLIDAYSKCDLIELAWKLFDRL-KTKDTVSWSAMIAGFNH 430

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+EM     + +  T+L++L + +    L+  K  H   ++ G +     
Sbjct: 431 CGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAV 490

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             A++ MY  CG++  +     +I   +  S W  +I AC  NG  ++A+     M +  
Sbjct: 491 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMNGLARDALALLSEM-KLH 548

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIK 523
              P+ VT ++V+SAC +  L  EG S     ++   G++  +++   ++ M  R   + 
Sbjct: 549 GLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQD-HGVEPGLEHYSCMVDMLSRAGKLN 607

Query: 524 SASTVFESC---YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPN 568
           SA  + E            W  ++SA  S   + + A   FR LE EP 
Sbjct: 608 SAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQ 656


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 194/648 (29%), Positives = 329/648 (50%), Gaps = 46/648 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+V+ SS + +     +   GK++HA  I+   E  P   + NSLIS+YS+ GD   AE 
Sbjct: 61  DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE--PDSVLYNSLISLYSKSGDSAKAED 118

Query: 233 AFWGMT---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            F  M     +DVVSW+A++  +  NG+  +A  +  E  L   + P+      +I  C+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACS 177

Query: 290 DSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVS 347
           +S  +  GR   G+ ++      D+ +  SL+D + K  NS   A  +F+ ++ +N +V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-VVT 236

Query: 348 WNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL 395
           W  MI+     G  +E +        S       TL ++  +C   E+L  GK +H W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296

Query: 396 KLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF- 451
           + G  ++     +L+ MY  C   G +     +  R+  +S  S W  +I    +N +  
Sbjct: 297 RSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS-WTALITGYMKNCNLA 353

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EAI  F  M  Q +  P+  T  +   ACGNL     GK + G A K  +  ++ V N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
           +I+M+ +   ++ A   FES    NL ++N  +    +N    +A +L   +   E   +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +  S+LS    +G +R G+QIH  V  LG   N  + +AL+ MYS C           
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               ++  +W+SMI+ +  HG     +E F++M   G++P + + +++LSACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G +++N+M E++ ++P+ EH+ C+VD+L R+G L +A+EFI  +P Q    VW   L AC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             H +T++GK  A  + +L+P     YI LSN+Y   G+W+++ E+ +
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 231/478 (48%), Gaps = 33/478 (6%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +DVV+W+AM+     N   +  +  F E +E G+  +      ++ A +  + +  GRV
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 95  VHCLSIKAGMIADSSLCN--VFVNMYAKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLH 151
                +K G   +S +C     ++M+ K  +   ++   F  M   + V+W  +++ C+ 
Sbjct: 188 TLGFLMKTGHF-ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +P + + +F +M  SG ++D  +LSS  +A A L  LS GK +H+  I+ G  D    
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD---- 302

Query: 212 SVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF-EEAFDLLHE 267
            V  SL+ MY++C   G ++   + F  M    V+SW A+I G+  N     EA +L  E
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M     VEP+  T  +    C +    R G+ V G A +R L  +  + NS++  + KS+
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQ----------FSFSTLL 372
            +  A+  F +++  N LVS+N+ + G      F++   L S+          F+F++LL
Sbjct: 423 RMEDAQRAFESLSEKN-LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           + + +     S+  G+ IH   +KLG S N    NAL+ MY  CG +  A S +     N
Sbjct: 482 SGVANVG---SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA-SRVFNFMEN 537

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            +   W  +I    ++G     ++TF  M  ++   P+ VT V ++SAC ++ L  EG
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEG 594



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 227/490 (46%), Gaps = 33/490 (6%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           FE++  +F +    +VVTW  MIT C++       + FF +MV  G   D  TL  + SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADT 139
             ++  L  G+ +H  +I++G++ D   C++ V+MYAKC   G ++     F  M     
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVE-CSL-VDMYAKCSADGSVDDCRKVFDRMEDHSV 336

Query: 140 VSWNTIMSGCLHN-NYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIH 197
           +SW  +++G + N N   + +  F EM   G  + ++ + SSA  A   L +   GK + 
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               K G   +   SV NS+ISM+ +   +E A+RAF  ++ K++VS+N  +DG   N  
Sbjct: 397 GQAFKRGLASNS--SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           FE+AF LL E+   R +     T  +L+S  A+   +R+G  +H   ++  L  +  + N
Sbjct: 455 FEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  YSK  S+  A  +FN +   N ++SW SMI+G             F +M+    +
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572

Query: 366 FSFSTLLAILPSCN-----SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
            +  T +AIL +C+     S     F       ++K    +    V+ L       G L 
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL----CRAGLLT 628

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVIS 479
            AF  +  +   +D   W   + AC  + + +   +   K +    N     + L N+ +
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688

Query: 480 ACGNLELAFE 489
             G  E + E
Sbjct: 689 CAGKWEESTE 698



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/193 (19%), Positives = 93/193 (48%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  ++   + S+++ +      E +   F     K++V++N  +     N         
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             E+ E  +   + T   ++S +  +  +++G  +H   +K G+  +  +CN  ++MY+K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++++   F+ M   + +SW ++++G   + +  + L  F +M   G + + V+  + 
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581

Query: 181 VAASACLGELSYG 193
           ++A + +G +S G
Sbjct: 582 LSACSHVGLVSEG 594


>gi|242082542|ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
 gi|241942389|gb|EES15534.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
          Length = 810

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 213/725 (29%), Positives = 355/725 (48%), Gaps = 55/725 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H  +IK G+ AD+   N  +  YAK G L S+   F      + V+W  ++S  +    P
Sbjct: 74  HASTIKLGVSADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGAP 133

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAA---SACLGELSYGKVIHALGIKLGYED-SPYV 211
           +  L     M  SG   +  +L+SA+ A   SA   ++  G  +H L +K G  D +PYV
Sbjct: 134 DLGLALLSSMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDGNPYV 193

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              +SL+ +Y++ G + A ER F G++   +DV  WN +++G+   G+    +D++  + 
Sbjct: 194 G--SSLMLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLEGYVATGR---GYDVMRTVV 248

Query: 270 LMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           LM    +  D+ T ++ +   + +  L  GR VHG  I      +  +MN+LMD Y K+ 
Sbjct: 249 LMHHSGIAADLFTYISAVKASSITCDLNFGRQVHGLVIHSEFESNTSVMNTLMDMYFKAG 308

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYLC--SQFSFSTLL 372
               A ++F  I    D VSWN+MISGL             F    Y C  +Q +FS +L
Sbjct: 309 QKEAAVVIFGKI-QWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKPNQVTFSVML 367

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +     + ES   G  I     + G+S+N +  NA+++M   CG L  A+     +S  
Sbjct: 368 RL---SGAKESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSVR 424

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            +   WN +I     +G  ++A++ F+S+     A PD  T   V+SA      A   + 
Sbjct: 425 -NVVTWNEMIAGYGLHGCSEDAMRLFRSLVCF-GARPDEFTYPAVLSAFQQDHDARNHEQ 482

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H   LK        V  +LI        +     + E     +L +W   ISAF ++  
Sbjct: 483 IHACVLKQGFASCQFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFVKHDL 542

Query: 553 EVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
           +  AL LF     +    P+E  + +IL+AC    ++R  + IH  V   G  ++  +SS
Sbjct: 543 DKEALFLFNLFRVDCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSKHFCVSS 602

Query: 609 ALLDMYSNC------KSNAA-----------WSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           AL+D Y+ C      KS  A           +++M++AY  HG   E + L+ +M    +
Sbjct: 603 ALVDAYAKCGDITAAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQL 662

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            PT ++ I+++SACSH GLV++G   +++ML  + + P   ++ C++D+L R G L+EA 
Sbjct: 663 APTPATFIAVISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRGLLEEAK 722

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
             I+ +P QP P VW ++++ C  HG+ ++G   AE +  + P + G Y+SLS++Y   G
Sbjct: 723 GVIEAMPFQPWPAVWRSLMNGCRIHGNKELGLLAAEQILTMAPNSDGAYVSLSHVYAEDG 782

Query: 772 RWKDA 776
            W+ A
Sbjct: 783 DWQSA 787



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 234/525 (44%), Gaps = 46/525 (8%)

Query: 35  NKDVVTWNAMITACVEN-------RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMN 87
           ++DV  WN M+   V         R VV+       M   GI  D  T +  V A +   
Sbjct: 221 SRDVACWNTMLEGYVATGRGYDVMRTVVL-------MHHSGIAADLFTYISAVKASSITC 273

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L  GR VH L I +   +++S+ N  ++MY K G   ++   F  +   DTVSWNT++S
Sbjct: 274 DLNFGRQVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEAAVVIFGKIQWKDTVSWNTMIS 333

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G  H+         F +M   G + + V+ S  +  S      S G  I  L  + GY D
Sbjct: 334 GLAHDEDERAAADCFFDMSRYGCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSD 393

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V V N++I+M SQCG +  A   F  ++ ++VV+WN +I G+ L+G  E+A      
Sbjct: 394 N--VLVANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDA------ 445

Query: 268 MQLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           M+L RS+      PD  T   ++S        R    +H   +++       +  SL+  
Sbjct: 446 MRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFASCQFVSTSLIKA 505

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQFSFS-------- 369
                S+     +      M DLVSW   IS      L KE L+L + F           
Sbjct: 506 KVALGSVLDPLKIIEEAGKM-DLVSWGVTISAFVKHDLDKEALFLFNLFRVDCPEKPDEF 564

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
            L  IL +C +   +   + IH   ++ G S +    +AL+  Y  CGD+ AA S    +
Sbjct: 565 ILGTILNACANAALIRQCRCIHALVVRTGHSKHFCVSSALVDAYAKCGDITAAKSTFAEV 624

Query: 430 SHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           S  +D +  +N ++ A   +G   E +  ++ MTQ Q A P   T + VISAC +L L  
Sbjct: 625 SSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLA-PTPATFIAVISACSHLGLVE 683

Query: 489 EGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES 531
           +GK L   ++ S  G++    N   LI +  R   ++ A  V E+
Sbjct: 684 QGKLLFS-SMLSAHGMNPTRANYTCLIDLLARRGLLEEAKGVIEA 727



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/495 (20%), Positives = 215/495 (43%), Gaps = 17/495 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y      E+++ +F +   KD V+WN MI+    +         F +M   G + 
Sbjct: 299 TLMDMYFKAGQKEAAVVIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKP 358

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T  +++           G  +  L+ + G   +  + N  +NM ++CG L  +   F
Sbjct: 359 NQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFF 418

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   + V+WN +++G   +   E  +  FR +   G + D  +  + ++A     +  
Sbjct: 419 CNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDAR 478

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IHA  +K G+    +VS   SLI      G +    +        D+VSW   I  
Sbjct: 479 NHEQIHACVLKQGFASCQFVS--TSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISA 536

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           F  +   +EA  L +  ++    +PD   + T+++ CA++ L+R+ R +H   +R     
Sbjct: 537 FVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSK 596

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKE 358
              + ++L+D Y+K   ++ A+  F  ++ + +D + +N+M++             L+++
Sbjct: 597 HFCVSSALVDAYAKCGDITAAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQD 656

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCG 417
           M  L    + +T +A++ +C+    +E GK +    L   G +        L+ +    G
Sbjct: 657 MTQLQLAPTPATFIAVISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRG 716

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQNASPDSVTLVN 476
            L  A  +++ +      + W  ++  C  +G+ +  +   +  +T   N+    V+L +
Sbjct: 717 LLEEAKGVIEAMPFQPWPAVWRSLMNGCRIHGNKELGLLAAEQILTMAPNSDGAYVSLSH 776

Query: 477 VISACGNLELAFEGK 491
           V +  G+ + A + +
Sbjct: 777 VYAEDGDWQSAEDTR 791



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 121/263 (46%), Gaps = 5/263 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +    STSL+ A   +      L +  E    D+V+W   I+A V++      L  
Sbjct: 490 QGFASCQFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFVKHDLDKEALFL 549

Query: 61  FGEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F    V+   + D   L  I++A      ++Q R +H L ++ G      + +  V+ YA
Sbjct: 550 FNLFRVDCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSKHFCVSSALVDAYA 609

Query: 120 KCGDLNSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           KCGD+ +++ TF+ +     D + +NT+++   ++    + L  +++M          + 
Sbjct: 610 KCGDITAAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPTPATF 669

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + ++A + LG +  GK++ +  +   +  +P  +    LI + ++ G +E A+     M
Sbjct: 670 IAVISACSHLGLVEQGKLLFSSMLS-AHGMNPTRANYTCLIDLLARRGLLEEAKGVIEAM 728

Query: 238 TCKD-VVSWNAIIDGFALNGKFE 259
             +     W ++++G  ++G  E
Sbjct: 729 PFQPWPAVWRSLMNGCRIHGNKE 751


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 210/724 (29%), Positives = 355/724 (49%), Gaps = 76/724 (10%)

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           Q++ LK     H   I +G   +  + +  +++YA     + S   F  +   D   WN+
Sbjct: 44  QISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNS 103

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           I+     N    + L +++ M  S    ++ ++   VA+ A L  ++YG+ IH L  KLG
Sbjct: 104 IIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLG 163

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
              S   +V +S + MYS+CG +E A   F  +  +DVV+W A++ G   NG+ +   + 
Sbjct: 164 L-FSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLEC 222

Query: 265 LHEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           L EM  +      P+  T+      C +   L EGR +HG  ++  + Y  ++ + L+  
Sbjct: 223 LCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSM 282

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           YSK  +  +A   F  +    D++SW SMIS             +F EML          
Sbjct: 283 YSKCGNPEEAHRSFCEVLN-KDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIV 341

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +  +L S ++   +   K+ H   ++  ++ + +  NAL+ MY   G L  A     R++
Sbjct: 342 ISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVN 401

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              +   WN+                                    ++S  G   LA   
Sbjct: 402 EQ-NFEAWNL------------------------------------MVSGYGATHLA--- 421

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           +S+H   +K+LM  +  V N+LI MYG+  ++  A  +F      ++ TWN +IS+++  
Sbjct: 422 RSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHC 480

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL L+  +   + +PN  ++VS+LSAC+ L  L  G+++H ++    F+ N  I+
Sbjct: 481 GHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIA 540

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+DMY+ C               +    W+ MIS YG HG    AIE F +M  S  +
Sbjct: 541 TALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAK 600

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   + +++LSAC+H+GLV EG +Y    +++Y V P  +H+ C+VD+LGRSG LQEA  
Sbjct: 601 PNGLTFLAVLSACAHAGLVKEG-KYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEA 659

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            + ++PI P  GVWGA+LS+C  H + +MG ++A+     + EN GYY+ +SNMY ++G+
Sbjct: 660 LVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGK 719

Query: 773 WKDA 776
           W++A
Sbjct: 720 WEEA 723



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 202/738 (27%), Positives = 346/738 (46%), Gaps = 65/738 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++  ++ L++ Y++      S  LF E  ++D   WN++I A   N      L F+
Sbjct: 62  GYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFY 121

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAK 120
             M       +  T+ +IV++  ++  +  GR +H L  K G+ + SS + + FV MY+K
Sbjct: 122 QWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSK 181

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE---KCLLYFREMGWSGEQADNVSL 177
           CG L  +   F  +   D V+W  ++ GC+ N   +   +CL     +G  GE+ +  +L
Sbjct: 182 CGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTL 241

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
                A   LG L  G+ +H L +K G + S  V   + L+SMYS+CG+ E A R+F  +
Sbjct: 242 EGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQ--SLLLSMYSKCGNPEEAHRSFCEV 299

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KD++SW ++I  ++  G   E  D+  EM L+  + PD   +  ++S  ++S+ + E 
Sbjct: 300 LNKDIISWTSMISAYSRMGWATECIDMFWEM-LVSGIYPDGIVISCMLSSFSNSMRVFEA 358

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
           ++ HG  IRR    D ++ N+L+  Y K   L  AE  F  +   N   +WN M+SG   
Sbjct: 359 KAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQN-FEAWNLMVSGY-- 415

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                                    +    +SIHC+ +K     N    N+L+ MY   G
Sbjct: 416 ------------------------GATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSG 451

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A  +  RI    D   WN +I +    GHF EA+  +  M  + +  P+S TLV+V
Sbjct: 452 NLTIARRIFCRIPR--DIVTWNTLISSYAHCGHFAEALSLYDKMVLE-DLKPNSATLVSV 508

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC +L    EG+ +H          +  +  ALI MY +C  ++ +  +F S +  ++
Sbjct: 509 LSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDV 568

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            TWN MIS +  +     A+E F+ +E    +PN ++ +++LSAC   G+++ GK + G 
Sbjct: 569 ITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGK 628

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                           +  YS   +   ++ M+   G  G   EA  L   M    I P 
Sbjct: 629 ----------------MQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSM---PISPD 669

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE-- 712
                +LLS+C     ++ G++   + ++  DV  +  ++V I +M    GK +EA +  
Sbjct: 670 GGVWGALLSSCKIHNEIEMGIRIAKHAIDS-DVENDG-YYVMISNMYSSIGKWEEAEKAR 727

Query: 713 -FIKNLPIQPKPGVWGAM 729
             +K   ++ K G W A+
Sbjct: 728 GIMKERGVRKKTG-WSAV 744



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 180/412 (43%), Gaps = 30/412 (7%)

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H + +  G+SNN    + L+ +Y +      +  L   I H  D   WN +I A   NG 
Sbjct: 55  HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHR-DAFLWNSIIKAHFSNGE 113

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQ 509
           +  A+  ++ M   + A P+  T+  ++++C  LEL   G+S+HGL  K  L    + V 
Sbjct: 114 YSRALDFYQWMRASE-ALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVG 172

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---- 565
           ++ + MY +C  ++ A  VF+     ++  W  ++    QN      LE    +      
Sbjct: 173 SSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGD 232

Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              PN  ++     AC  LG L  G+ +HG V   G   +  + S LL MYS C      
Sbjct: 233 GERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEA 292

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K   +W+SMISAY   G   E I++F EM  SGI P    +  +LS+ S+S
Sbjct: 293 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNS 352

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
             V E   ++  ++  +    +   +  ++ M  + G L+ A +F   +  Q     W  
Sbjct: 353 MRVFEAKAFHGLIIRRHYTLDQMVQNA-LLSMYCKFGFLKLAEKFFGRVNEQNFEA-WNL 410

Query: 729 MLSACSHHGDTKMGKQVAELLFK-LEPENVGYYISLSNMYVALGRWKDAVEI 779
           M+S    +G T + + +   + K L  ENV    SL +MY   G    A  I
Sbjct: 411 MVSG---YGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRI 459


>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
 gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
          Length = 699

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 203/737 (27%), Positives = 347/737 (47%), Gaps = 78/737 (10%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+  G+  D+ + +  + +  ++  L  G+ +H L I++G++   S+ N  VNMY KCG 
Sbjct: 1   MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGS 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVA 182
           L  +   F GM   D +SWN +++      + ++ +  F+ M   G  + D+V+  + V+
Sbjct: 61  LALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVS 120

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD- 241
           A      L     I AL  + G  DS  V + N+L++MYS+CG +++A   F  M  +D 
Sbjct: 121 ACCDPSALEAANRIFALVEERGLLDSDVV-LGNALVNMYSKCGSLKSATMVFERMKIRDD 179

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV W  +I  +A +G  E A +L  +M+   ++ PD  T+ + ++ C    +L EGR +H
Sbjct: 180 VVLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIH 239

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I R    +L++ N+L+  Y+   +L  A   F  +A  N +VSWN+MI+        
Sbjct: 240 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRN-VVSWNAMIAAYVHHNCD 298

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F +M     Q +  T +  L +C++P + E G        K   S + +  NAL
Sbjct: 299 KEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNAL 358

Query: 410 MHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           +H Y   G L     + QR+     D   WN VI    +NG F+ A++    M Q+    
Sbjct: 359 LHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALEL---MPQK---- 411

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
                  N+ S  G L     G  +H                      GR  D +    +
Sbjct: 412 -------NLGSWNGLL-----GAYIH---------------------VGRLADTRK---L 435

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           FE     ++ TWN ++ A+ +      A+ LFR +     EPN I+  ++L AC     L
Sbjct: 436 FEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGACAGEASL 495

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G+++H  +   G     F+ +AL+DM+  C               K  ++W+ +++A 
Sbjct: 496 AEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAAL 555

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +G   EA++ F  M   GI+PT  + I +  ACSH+G +++    + ++  +Y + P 
Sbjct: 556 AQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPL 615

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
             H+  + D+LGR+G L EA E IK +P       W  +LSAC  HGD + G++VA  + 
Sbjct: 616 PSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVERGRKVAGQVL 675

Query: 751 KLEPENVGYYISLSNMY 767
           +  P +    ++LSN++
Sbjct: 676 RWNPGDSAAGVALSNIF 692



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 189/691 (27%), Positives = 315/691 (45%), Gaps = 65/691 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    +L+  Y        +  +F    ++DV++WNA+ITA  +       +  F
Sbjct: 40  GLLTQISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELF 99

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYA 119
             M E+G I  DS T + +VSA    + L+    +  L  + G++ +D  L N  VNMY+
Sbjct: 100 QAMQEDGRIEPDSVTFVAVVSACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYS 159

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQA---DNV 175
           KCG L S+   F  M   D V  W T++S    + Y E  L  F++M    E+A   D  
Sbjct: 160 KCGSLKSATMVFERMKIRDDVVLWTTMISVYAQDGYSEAALELFQQM--EKEEALLPDGF 217

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L+SA+AA      L  G+ IHAL I+ G E    + V N+L+SMY+ CG ++ A   F 
Sbjct: 218 TLASALAACTGPEMLEEGREIHALVIERGCESE--LVVGNALVSMYANCGTLQDALECFQ 275

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  ++VVSWNA+I  +  +   +EAF + ++MQL   V+P+  T VT +S C+      
Sbjct: 276 KMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQL-EGVQPNSVTFVTFLSTCSTPAAFE 334

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG 354
           +G        +R+   D L+ N+L+  Y+K   L + + +F  +    +D+V+WN++I G
Sbjct: 335 DGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEG 394

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             +          F   L ++P           K++  W             N L+  YI
Sbjct: 395 SVR-------NGEFRNALELMPQ----------KNLGSW-------------NGLLGAYI 424

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           + G L     L + +    D   WN+++ A  +    +EA++ F+ M   +   P+S+T 
Sbjct: 425 HVGRLADTRKLFEEMEER-DVITWNMILGAYVERDMAKEAVRLFRRMI-AEGTEPNSITW 482

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
             ++ AC       EG+ +H L  +     +  V NAL+ M+G+C  +  A   FE    
Sbjct: 483 TTMLGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRA 542

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            +  +WN +++A +QN     AL+ F  ++ E   P +++ + +  AC+  G L   K I
Sbjct: 543 KDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTI 602

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
              + H                Y      + +S M    G  G   EA E+   +  S  
Sbjct: 603 FASLRH---------------DYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFS-- 645

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
              +   ++LLSAC   G V+ G +    +L
Sbjct: 646 -RDELPWMTLLSACKVHGDVERGRKVAGQVL 675



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 176/421 (41%), Gaps = 75/421 (17%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + L    +L++ Y+N    + +L  F +   ++VV+WNAMI A V + C       
Sbjct: 245 RGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRI 304

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYA 119
           F +M  EG++ +S T +  +S  +     + G ++  L ++  + + D+ + N  ++ YA
Sbjct: 305 FYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDG-LIRALEVEKRVESLDALVGNALLHTYA 363

Query: 120 KCGDLNSSECTFSGMHCA--DTVSWNTIMSGCLHNN--------YPEKCL---------- 159
           K G L+  +  F  M     D V+WN ++ G + N          P+K L          
Sbjct: 364 KLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQKNLGSWNGLLGAY 423

Query: 160 ----------LYFREM------GWS-------------------------GEQADNVSLS 178
                       F EM       W+                         G + ++++ +
Sbjct: 424 IHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWT 483

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A A    L+ G+ +H L  + G +   +V   N+L+ M+ +C  +  A +AF  + 
Sbjct: 484 TMLGACAGEASLAEGRRVHELIAERGADSELFVG--NALVDMFGKCASLGGARQAFERIR 541

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD  SWN ++   A NG  EEA      MQ    ++P   T + +   C+ +  L + +
Sbjct: 542 AKDASSWNVLVAALAQNGDAEEALKQFLRMQ-REGIKPTDVTFIVVFWACSHAGRLEQAK 600

Query: 299 SV-----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           ++     H Y I  L  +     + + D   ++  L +AE +   I    D + W +++S
Sbjct: 601 TIFASLRHDYGIAPLPSH----YSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLS 656

Query: 354 G 354
            
Sbjct: 657 A 657



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 4/285 (1%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L +   LL AY +V     +  LF E   +DV+TWN ++ A VE       +  F  M+
Sbjct: 412 NLGSWNGLLGAYIHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMI 471

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG   +S T   ++ A      L +GR VH L  + G  ++  + N  V+M+ KC  L 
Sbjct: 472 AEGTEPNSITWTTMLGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLG 531

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  +   D  SWN +++    N   E+ L  F  M   G +  +V+      A +
Sbjct: 532 GARQAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACS 591

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVS 244
             G L   K I A  ++  Y  +P  S  + +  +  + G ++ AE     +   +D + 
Sbjct: 592 HAGRLEQAKTIFA-SLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELP 650

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           W  ++    ++G  E    +    Q++R    D A  V L ++ A
Sbjct: 651 WMTLLSACKVHGDVERGRKVAG--QVLRWNPGDSAAGVALSNIFA 693



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 4/188 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + L    +L+  +   +    +   F     KD  +WN ++ A  +N      L  
Sbjct: 508 RGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNGDAEEALKQ 567

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC-LSIKAGMIADSSLCNVFVNMYA 119
           F  M  EGI+    T +++  A +    L+Q + +   L    G+    S  +   ++  
Sbjct: 568 FLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLG 627

Query: 120 KCGDLNSSECTFSGMHCA-DTVSWNTIMSGC-LHNNYPEKCLLYFREMGWS-GEQADNVS 176
           + G L+ +E     +  + D + W T++S C +H +      +  + + W+ G+ A  V+
Sbjct: 628 RAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAAGVA 687

Query: 177 LSSAVAAS 184
           LS+  A +
Sbjct: 688 LSNIFAGA 695


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 300/596 (50%), Gaps = 35/596 (5%)

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+S Y+  GD+ +A R        D  ++   +   A  G+  EA  +  +M+     E 
Sbjct: 66  LLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQ 125

Query: 277 DIATVVTL-ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           +   V++L +     S     GR +H   ++   G DL +MN+L+D Y+K   L  A  +
Sbjct: 126 EDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKV 184

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ I P  ++VSW SM+SG            LF EM       S  T+ ++L +C    S
Sbjct: 185 FDRI-PDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGS 243

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L  G+ IH   +K G  +N     A++ MY+ CG+   A  +   +S   D   W  +IV
Sbjct: 244 LHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSF-VDLVLWTTMIV 302

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
             TQNG   +A+  F    +     P+SVT+  V+SA   L     G+S+HG+++K    
Sbjct: 303 GYTQNGSPLDALLLFVD-DKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAV 361

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            +  V NAL+ MY +C+ +  A  +F    N ++ TWN +I+ +++N     AL LF H+
Sbjct: 362 ENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHM 421

Query: 564 EFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
             +   P+ IS+V+ LSAC  LG L  GK  H +     F  N ++++ALL++Y+ C   
Sbjct: 422 RVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADL 481

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       ++   W +MI  YG  G    +I+LF+EM    I+P ++   S+LS C
Sbjct: 482 PSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTC 541

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SH+G+V  G + + +M   +++ P  +H+ C+VD+L R+G L+EA EFI+ +P+Q    +
Sbjct: 542 SHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSI 601

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           W A L  C  H   +  ++    +  L P+   + + +SN+Y + GRW  ++ I K
Sbjct: 602 WQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRK 657



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 250/508 (49%), Gaps = 32/508 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y+     +++  +F    +++VV+W +M++ C++N     GL  F EM +E I  
Sbjct: 167 NLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILP 226

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T+  ++ A T +  L QGR++H   +K G++++  +    ++MY KCG+   +   F
Sbjct: 227 SEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVF 286

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V W T++ G   N  P   LL F +  +     ++V++++ ++ASA L  LS
Sbjct: 287 DELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLS 346

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IH + +KLG  ++    V N+L+ MY++C  +  A+  F  +  KDVV+WN++I G
Sbjct: 347 LGRSIHGISVKLGAVENDV--VMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAG 404

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A N    +A  L   M++  S+ PD  +VV  +S C     L  G+  H YA++     
Sbjct: 405 YAENDMGSDALMLFSHMRVQGSL-PDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMS 463

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG------------LFK 357
           ++ +  +L++ Y+K   L  A+ +F   + MND   V+W +MI G            LF 
Sbjct: 464 NIYVNTALLNLYNKCADLPSAQRVF---SEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFN 520

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN---ALMHMYI 414
           EML    Q + +   +IL +C+    +  GK   C++    + N T  +     ++ +  
Sbjct: 521 EMLKDNIQPNEAVFTSILSTCSHTGMVTVGKK--CFESMAHYFNITPSMKHYACMVDVLA 578

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G+L  A   +Q++   +DTS W   +  C  +   + A +    M      +PD   +
Sbjct: 579 RAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVM 638

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLM 502
           ++      NL  ++ G+    LA++ LM
Sbjct: 639 MS------NLYTSY-GRWDKSLAIRKLM 659



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 237/504 (47%), Gaps = 21/504 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           G L  L   T LL+ Y+ +    S+  +  ET + D  T+   +   A        + +H
Sbjct: 55  GLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVH 114

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
                     + D   L + + A  +      GR +HC  +KAG   D  + N  V+MYA
Sbjct: 115 RDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGG-GDLFVMNNLVDMYA 173

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K GDL ++   F  +   + VSW +++SGCL N   ++ L+ F EM          +++S
Sbjct: 174 KGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMAS 233

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   LG L  G++IH   +K G   + +  +T +++ MY +CG+ E A + F  ++ 
Sbjct: 234 VLMACTMLGSLHQGRLIHGSVMKHGLVSNHF--ITAAMLDMYVKCGEAEDARQVFDELSF 291

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D+V W  +I G+  NG   +A  L  + + MR V P+  T+ T++S  A    L  GRS
Sbjct: 292 VDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIV-PNSVTIATVLSASAQLRNLSLGRS 350

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG +++     + ++MN+L+D Y+K  +LS A+ +F  +    D+V+WNS+I+G     
Sbjct: 351 IHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLN-KDVVTWNSLIAGYAEND 409

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF  M    S     +++  L +C     L  GK  H + +K  F +N     
Sbjct: 410 MGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNT 469

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+++Y  C DL +A  +   ++ + +T  W  +I      G    +I  F  M  + N 
Sbjct: 470 ALLNLYNKCADLPSAQRVFSEMN-DRNTVTWGAMIGGYGMQGDSAGSIDLFNEML-KDNI 527

Query: 468 SPDSVTLVNVISACGNLELAFEGK 491
            P+     +++S C +  +   GK
Sbjct: 528 QPNEAVFTSILSTCSHTGMVTVGK 551


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 194/648 (29%), Positives = 329/648 (50%), Gaps = 46/648 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+V+ SS + +     +   GK++HA  I+   E  P   + NSLIS+YS+ GD   AE 
Sbjct: 61  DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE--PDSVLYNSLISLYSKSGDSAKAED 118

Query: 233 AFWGMT---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            F  M     +DVVSW+A++  +  NG+  +A  +  E  L   + P+      +I  C+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACS 177

Query: 290 DSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVS 347
           +S  +  GR   G+ ++      D+ +  SL+D + K  NS   A  +F+ ++ +N +V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-VVT 236

Query: 348 WNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL 395
           W  MI+     G  +E +        S       TL ++  +C   E+L  GK +H W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296

Query: 396 KLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF- 451
           + G  ++     +L+ MY  C   G +     +  R+  +S  S W  +I    +N +  
Sbjct: 297 RSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS-WTALITGYMKNCNLA 353

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EAI  F  M  Q +  P+  T  +   ACGNL     GK + G A K  +  ++ V N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
           +I+M+ +   ++ A   FES    NL ++N  +    +N    +A +L   +   E   +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
             +  S+LS    +G +R G+QIH  V  LG   N  + +AL+ MYS C           
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               ++  +W+SMI+ +  HG     +E F++M   G++P + + +++LSACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G +++N+M E++ ++P+ EH+ C+VD+L R+G L +A+EFI  +P Q    VW   L AC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             H +T++GK  A  + +L+P     YI LSN+Y   G+W+++ E+ +
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 231/478 (48%), Gaps = 33/478 (6%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +DVV+W+AM+     N   +  +  F E +E G+  +      ++ A +  + +  GRV
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 95  VHCLSIKAGMIADSSLCN--VFVNMYAKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLH 151
                +K G   +S +C     ++M+ K  +   ++   F  M   + V+W  +++ C+ 
Sbjct: 188 TLGFLMKTGHF-ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +P + + +F +M  SG ++D  +LSS  +A A L  LS GK +H+  I+ G  D    
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD---- 302

Query: 212 SVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF-EEAFDLLHE 267
            V  SL+ MY++C   G ++   + F  M    V+SW A+I G+  N     EA +L  E
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M     VEP+  T  +    C +    R G+ V G A +R L  +  + NS++  + KS+
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQ----------FSFSTLL 372
            +  A+  F +++  N LVS+N+ + G      F++   L S+          F+F++LL
Sbjct: 423 RMEDAQRAFESLSEKN-LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           + + +     S+  G+ IH   +KLG S N    NAL+ MY  CG +  A S +     N
Sbjct: 482 SGVANVG---SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA-SRVFNFMEN 537

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
            +   W  +I    ++G     ++TF  M  ++   P+ VT V ++SAC ++ L  EG
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEG 594



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 266/556 (47%), Gaps = 44/556 (7%)

Query: 64  MVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           M  +GIR  DS T   ++ +  +    + G++VH   I+  +  DS L N  +++Y+K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPE----KCLLYFREMGWSGEQADNV 175
           D   +E  F  M      D VSW+ +M+ C  NN  E    K  + F E+G         
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMA-CYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD-IEAAERAF 234
           ++  A + S  +G    G+V     +K G+ +S  V V  SLI M+ +  +  E A + F
Sbjct: 171 AVIRACSNSDFVG---VGRVTLGFLMKTGHFESD-VCVGCSLIDMFVKGENSFENAYKVF 226

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M+  +VV+W  +I      G   EA     +M ++   E D  T+ ++ S CA+   L
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKFTLSSVFSACAELENL 285

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMI 352
             G+ +H +AIR  L  D+    SL+D Y+K ++    +        M D  ++SW ++I
Sbjct: 286 SLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343

Query: 353 SG-------------LFKEMLYL----CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           +G             LF EM+       + F+FS+      +C +      GK +     
Sbjct: 344 TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK---ACGNLSDPRVGKQVLGQAF 400

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K G ++N+   N+++ M++    +  A    + +S  +  S +N  +    +N +F++A 
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS-YNTFLDGTCRNLNFEQAF 459

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           K    +T+++     + T  +++S   N+    +G+ +H   +K  +  +  V NALI+M
Sbjct: 460 KLLSEITERE-LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  I +AS VF    N N+ +W  MI+ F+++   +R LE F  +  E   PNE++ 
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578

Query: 573 VSILSACTQLGVLRHG 588
           V+ILSAC+ +G++  G
Sbjct: 579 VAILSACSHVGLVSEG 594



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 228/491 (46%), Gaps = 35/491 (7%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           FE++  +F +    +VVTW  MIT C++       + FF +MV  G   D  TL  + SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADT 139
             ++  L  G+ +H  +I++G++ D   C++ V+MYAKC   G ++     F  M     
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVE-CSL-VDMYAKCSADGSVDDCRKVFDRMEDHSV 336

Query: 140 VSWNTIMSGCLHN-NYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIH 197
           +SW  +++G + N N   + +  F EM   G  + ++ + SSA  A   L +   GK + 
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
               K G   +   SV NS+ISM+ +   +E A+RAF  ++ K++VS+N  +DG   N  
Sbjct: 397 GQAFKRGLASNS--SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           FE+AF LL E+   R +     T  +L+S  A+   +R+G  +H   ++  L  +  + N
Sbjct: 455 FEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  YSK  S+  A  +FN +   N ++SW SMI+G             F +M+    +
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNA-----LMHMYINCGDL 419
            +  T +AIL +C+       G     W+     + ++ I         ++ +    G L
Sbjct: 573 PNEVTYVAILSACS-----HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLL 627

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVI 478
             AF  +  +   +D   W   + AC  + + +   +   K +    N     + L N+ 
Sbjct: 628 TDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIY 687

Query: 479 SACGNLELAFE 489
           +  G  E + E
Sbjct: 688 ACAGKWEESTE 698



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/193 (19%), Positives = 93/193 (48%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  ++   + S+++ +      E +   F     K++V++N  +     N         
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             E+ E  +   + T   ++S +  +  +++G  +H   +K G+  +  +CN  ++MY+K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++++   F+ M   + +SW ++++G   + +  + L  F +M   G + + V+  + 
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581

Query: 181 VAASACLGELSYG 193
           ++A + +G +S G
Sbjct: 582 LSACSHVGLVSEG 594


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 196/661 (29%), Positives = 323/661 (48%), Gaps = 98/661 (14%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S+   +++ Y  CG  + A      +T    V WN ++      G  + A  +   M L 
Sbjct: 84  SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRM-LR 142

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
              +PD  T+   +  C +      GR++HG         ++ + N+L+  YS+  SL  
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202

Query: 332 AELLFNAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS------TL 371
           A L+F+ I    ++D++SWNS+++             LF EM  +  + + +      ++
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQR 428
           + ILP+C S ++L   K IH + ++ G   +    NAL+  Y  CG   D V  F++++ 
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ------------------------ 464
                D   WN ++   TQ+G+F  A + F++M ++                        
Sbjct: 323 ----KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378

Query: 465 ----------QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR------ 507
                       + P+SVT+++++SAC +L    +G  +H  +LK  L+ LD        
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438

Query: 508 -----VQNALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELF 560
                V NALI MY +CR  K+A ++F+S      N+ TW  MI  ++Q      AL++F
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498

Query: 561 RHL-----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLDM 613
             +        PN  +I  IL AC  L  LR GKQIH +V      E S  F+++ L+DM
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS C               ++  +W+SM+S YG HG+G EA+++F +M  +G  P   S 
Sbjct: 559 YSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           + LL ACSHSG+VD+GL Y++ M  +YDV    EH+ C++D+L R G+L +A++ I+ +P
Sbjct: 619 LVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMP 678

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++P   +W A+LSAC  H + ++ +     L  ++ EN G Y  +SN+Y    RWKD   
Sbjct: 679 MEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVAR 738

Query: 779 I 779
           I
Sbjct: 739 I 739



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 166/664 (25%), Positives = 288/664 (43%), Gaps = 108/664 (16%)

Query: 105 IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
           ++  SL    V  Y  CG    +      +  +  V WN ++   +   + ++ +     
Sbjct: 80  VSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCR 139

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M  +G + D+ +L  A+ A   L     G+ +H L    G+E +  V V N+L++MYS+C
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESN--VFVCNALVAMYSRC 197

Query: 225 GDIEAAERAFWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-----RSVEP 276
           G +E A   F  +T K   DV+SWN+I+           A +L  EM ++      +   
Sbjct: 198 GSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERS 257

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           DI ++V ++  CA    L + + +H YAIR     D  + N+L+D Y+K  S++ A  +F
Sbjct: 258 DIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317

Query: 337 NAIAPMNDLVSWNSMISGL----------------------------------------- 355
           N +    D+VSWN+M++G                                          
Sbjct: 318 N-VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCS 376

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK------------L 397
                 F++M+   S+ +  T++++L +C S  +L  G  IH + LK             
Sbjct: 377 QEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGD 436

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIK 456
           G   + +  NAL+ MY  C    AA S+   I     +   W ++I    Q G   +A+K
Sbjct: 437 GDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALK 496

Query: 457 TFKSMTQQQNA-SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALI 513
            F  M  +  A +P++ T+  ++ AC +L     GK +H    +      +   V N LI
Sbjct: 497 IFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLI 556

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
            MY +C D+ +A  VF+S    N  +W  M+S +  +     AL++F  ++   F P++I
Sbjct: 557 DMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA-----LLDMYSNCKSNAAWSS 625
           S + +L AC+  G++  G     + F +  ++   ++SA     ++D+ + C        
Sbjct: 617 SFLVLLYACSHSGMVDQGL----NYFDIMRRDYDVVASAEHYACVIDLLARC-------- 664

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC---SHSGLVDEGLQYYNNML 682
                G   K W+ I+   EM    + P+    ++LLSAC   S+  L +  L    NM 
Sbjct: 665 -----GRLDKAWKTIQ---EM---PMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713

Query: 683 EEYD 686
            E D
Sbjct: 714 AEND 717



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 154/642 (23%), Positives = 275/642 (42%), Gaps = 108/642 (16%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T ++ +Y      + +L++         V WN ++   ++   +   +     M+  G +
Sbjct: 87  TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL   + A  ++     GR +H L    G  ++  +CN  V MY++CG L  +   
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206

Query: 131 FSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW------SGEQADNVSLSSAV 181
           F  +      D +SWN+I++  +  + P   L  F EM        + E++D +S+ + +
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L   K IH+  I+ G     +  V N+LI  Y++CG +  A + F  M  KD
Sbjct: 267 PACASLKALPQIKEIHSYAIRNGTFADAF--VCNALIDTYAKCGSMNDAVKVFNVMEFKD 324

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQ-------------------------------- 269
           VVSWNA++ G+  +G F  AF+L   M+                                
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384

Query: 270 --LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL------------GYDLLM 315
             ++   EP+  T+++L+S CA    L +G  +H Y++++ L            G DL++
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKEML-- 360
            N+L+D YSK  S   A  +F++I     ++V+W  MI G            +F EM+  
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504

Query: 361 -YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI--GVNALMHMYINCG 417
            Y  +  ++ T+  IL +C    +L  GK IH +  +      ++    N L+ MY  CG
Sbjct: 505 PYAVAPNAY-TISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCG 563

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D+  A ++   +   ++ S W  ++     +G  +EA+  F  M Q+    PD ++ + +
Sbjct: 564 DVDTARNVFDSMPKRNEVS-WTSMMSGYGMHGRGKEALDIFDKM-QKAGFVPDDISFLVL 621

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC +      G    GL    +M  D  V             + SA            
Sbjct: 622 LYACSH-----SGMVDQGLNYFDIMRRDYDV-------------VASAE----------- 652

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
             + C+I   ++     +A +  + +  EP+ +  V++LSAC
Sbjct: 653 -HYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 242/555 (43%), Gaps = 81/555 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVENRCVVMGL 58
           GF +++    +L+  YS     E +  +F E   K   DV++WN+++ A V+       L
Sbjct: 179 GFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238

Query: 59  HFFGEM---VEEGI---RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN 112
             F EM   V E     R D  +++ I+ A   +  L Q + +H  +I+ G  AD+ +CN
Sbjct: 239 ELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCN 298

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN----------------NYP- 155
             ++ YAKCG +N +   F+ M   D VSWN +++G   +                N P 
Sbjct: 299 ALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358

Query: 156 ------------------EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
                             ++ L  F++M   G + ++V++ S ++A A LG LS G  IH
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418

Query: 198 ALGIK----------LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSW 245
           A  +K           G  D   + V N+LI MYS+C   +AA   F  +  ++  VV+W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478

Query: 246 NAIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
             +I G+A  G   +A  +  EM     +V P+  T+  ++  CA    LR G+ +H Y 
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAY- 537

Query: 305 IRRLLGYD---LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           + R   Y+     + N L+D YSK   +  A  +F+++ P  + VSW SM+SG       
Sbjct: 538 VTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM-PKRNEVSWTSMMSGYGMHGRG 596

Query: 355 -----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
                +F +M    ++    SF   L +L +C+    ++ G       +       +   
Sbjct: 597 KEALDIFDKMQKAGFVPDDISF---LVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEH 653

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
              ++ +   CG L  A+  +Q +        W  ++ AC  + + + A      +   +
Sbjct: 654 YACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713

Query: 466 NASPDSVTLVNVISA 480
             +  S TL++ I A
Sbjct: 714 AENDGSYTLISNIYA 728


>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
          Length = 805

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 203/736 (27%), Positives = 369/736 (50%), Gaps = 46/736 (6%)

Query: 82  ALTQMNC--LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           AL   NC  ++  + +H   +  G+  D  L +  +  YA  G L  +   F G    D 
Sbjct: 50  ALLFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNNDL 109

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
             WN++M       YPE+ +L +R +       D  +++  + +   L  L  GK +HA 
Sbjct: 110 AEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKGMHAD 169

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA--LNGK 257
            +KLG     +V   +SL+ +YS+   ++ +++AF  +  KD+VS+ ++I G++  ++  
Sbjct: 170 SVKLGLSRDKFVG--SSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSENMDST 227

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMM 316
              AF ++ +M    ++E +  T+V+L+ +  +   +REG+SVH Y+IRR +G  D ++ 
Sbjct: 228 SWNAFKIVSDMS-WSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLE 286

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE------------MLYLCS 364
            SL+  Y +  +   A  +    A    + SWN+M++GL +             MLY   
Sbjct: 287 TSLVHMYMQCGACQLASAVLKNSA--QSVASWNAMLAGLVRTGQSGNAIHYLYIMLYEHK 344

Query: 365 QFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
               S   A ++ +C    +  +  S+H + ++     + +   AL+ +Y+ C  +  + 
Sbjct: 345 VVPDSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISK 404

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L  ++    DT  +N +I    QNG   EAI   K M  +  A P+ VT++++++A  +
Sbjct: 405 RLFNQLVVK-DTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVA-PNFVTILSLLAAIAD 462

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN-- 541
            +    G+ +HG +++     +  + N +I MY  C  I SA  VF S  N NL +W   
Sbjct: 463 HKDFARGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTM 522

Query: 542 ---CMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
              C+         E+  L + +H + +P+ I++++ + A ++ G L+  KQ+H  V+  
Sbjct: 523 MMGCLFCGHGGQTVELFQLLMQQH-DNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRA 581

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
             ++++   ++L+  Y+ C               +   +W+SMISAYG HG   + +E+F
Sbjct: 582 LLEKDTKTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMF 641

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             M    I P   +  S+LSACSH+GL+ EGL  + +M   Y VRP+ EH+ C VD++ R
Sbjct: 642 KLMEEGNINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSMYSVRPQEEHYGCFVDLMSR 701

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G L+E Y+FIK   +  K  V  A+LSAC  +G+T +G+ ++  L ++  +N G Y  +
Sbjct: 702 AGHLEEGYKFIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLEVGQQNPGTYALI 761

Query: 764 SNMYVALGRWKDAVEI 779
           S ++   G+W  +  I
Sbjct: 762 SEVFAQKGQWNKSASI 777



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 181/718 (25%), Positives = 330/718 (45%), Gaps = 51/718 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + +L  Y+++     +   F    N D+  WN+++            +  +  +    I 
Sbjct: 82  SEILICYASLGVLCKTRLCFQGFLNNDLAEWNSVMVDIFRAGYPEEAILLYRGLKLRQID 141

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T+   + +  ++  L  G+ +H  S+K G+  D  + +  V +Y+K   ++ S+  
Sbjct: 142 LDEKTVTFGLKSCIELRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKA 201

Query: 131 FSGMHCADTVSWNTIMSGCLHN--NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  +   D VS+ ++++G   N  +          +M WS  + + V+L S +  +  LG
Sbjct: 202 FEEILDKDIVSYTSMITGYSENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLG 261

Query: 189 ELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            +  GK +H   I+  +G  D     +  SL+ MY QCG  + A  A    + + V SWN
Sbjct: 262 AIREGKSVHCYSIRRDIGISDEV---LETSLVHMYMQCGACQLAS-AVLKNSAQSVASWN 317

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A++ G    G+   A   L+ M     V PD  T   +IS CA+        SVH Y IR
Sbjct: 318 AMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVISACAELCNSGYAASVHAYIIR 377

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R +  D+++  +L+  Y K   ++ ++ LFN +  + D VS+N+MI G            
Sbjct: 378 RSIPLDVVLATALIKVYLKCTRITISKRLFNQLV-VKDTVSYNAMIYGYLQNGMVNEAIA 436

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L KEM+  C   +F T+L++L +    +    G+ IH + ++ GF +N    N ++ MY 
Sbjct: 437 LLKEMVTECVAPNFVTILSLLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQIIRMYS 496

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG + +A  +      N +   W  +++ C   GH  + ++ F+ + QQ +  PDS+ +
Sbjct: 497 GCGKIASARIVFASF-ENKNLISWTTMMMGCLFCGHGGQTVELFQLLMQQHDNKPDSIAV 555

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           +  I A          K +H    ++L+  DT+  N+LIT Y +C  +  + ++F S  +
Sbjct: 556 MTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLSLEH 615

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            +L +WN MISA+  +    + LE+F+ +E     P+ ++  S+LSAC+  G+++ G   
Sbjct: 616 RDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEGL-- 673

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWS---SMISAYGYHGKGWEAIELFHEMCN 648
             H+F            ++  MYS       +     ++S  G+  +G++ I+L      
Sbjct: 674 --HIFQ-----------SMTSMYSVRPQEEHYGCFVDLMSRAGHLEEGYKFIKL------ 714

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
           S +    S + +LLSAC   G    G    N +LE     P T  +  I ++  + G+
Sbjct: 715 STLNDKSSVLCALLSACRTYGNTMLGQVISNELLEVGQQNPGT--YALISEVFAQKGQ 770



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 148/292 (50%), Gaps = 10/292 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y   +    S  LF +   KD V++NAMI   ++N  V   +    EMV E +
Sbjct: 387 ATALIKVYLKCTRITISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECV 446

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  T+L +++A+       +GR +H  SI+ G  ++  + N  + MY+ CG + S+  
Sbjct: 447 APNFVTILSLLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARI 506

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR-EMGWSGEQADNVSLSSAVAASACLG 188
            F+     + +SW T+M GCL   +  + +  F+  M     + D++++ +A+ A +  G
Sbjct: 507 VFASFENKNLISWTTMMMGCLFCGHGGQTVELFQLLMQQHDNKPDSIAVMTAIQAVSEFG 566

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L   K +H    +   E        NSLI+ Y++CG ++ +   F  +  +D+ SWN++
Sbjct: 567 HLKGVKQVHCFVYRALLEKDT--KTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSM 624

Query: 249 IDGFALNG---KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           I  + ++G   K  E F L+ E     ++ PD  T  +++S C+ + L++EG
Sbjct: 625 ISAYGMHGFYTKVLEMFKLMEE----GNINPDGLTFSSVLSACSHAGLIKEG 672



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 1/193 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  +  ++  YS      S+  +F    NK++++W  M+  C+        +  F
Sbjct: 480 GFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVELF 539

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             ++++   + DS  ++  + A+++   LK  + VHC   +A +  D+   N  +  YAK
Sbjct: 540 QLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAK 599

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ S   F  +   D  SWN+++S    + +  K L  F+ M       D ++ SS 
Sbjct: 600 CGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSV 659

Query: 181 VAASACLGELSYG 193
           ++A +  G +  G
Sbjct: 660 LSACSHAGLIKEG 672


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 194/648 (29%), Positives = 320/648 (49%), Gaps = 56/648 (8%)

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + + ++ S+AV AS    + +    +HA+ +  G     + +VTNSL + Y++ G   +
Sbjct: 32  RRVNPIAFSAAVRAS----DPASLPALHAVAVTTGLHG--FAAVTNSLAARYAKTGSFPS 85

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F     +DV S+N I+  F       EA D    M    +V PD  T    +SL A
Sbjct: 86  AVGVFAAARARDVSSYNTILSAFP---DPAEALDFASWMLRSGAVRPDAVTCTVALSLAA 142

Query: 290 ---DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
              +  L+R+   +H  A R  L  D+ + N+L+  YS+  SL +A  +F+ + P  DLV
Sbjct: 143 GRGEGFLVRQ---LHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDM-PARDLV 198

Query: 347 SWNSMISGL-------------FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHC 392
           SWN++I GL             F  ML     Q    ++ +++P+C     LE G+ +H 
Sbjct: 199 SWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHG 258

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           + +KLG        N L+ MY  CG   +A  L   +S   D   W   I   + +G  +
Sbjct: 259 FAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSER-DVVSWTTAI---SMDG--E 312

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +A+  F  M ++    P+ VT V ++SA      A   + +H   LK+ +  +    N+L
Sbjct: 313 DALTLFNGM-RRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSL 371

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--FEPNEI 570
           ITMY + R +  A  VF+      +  WN +IS ++QN     ALELF  +     PNE 
Sbjct: 372 ITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCLTPNET 431

Query: 571 SIVSILSACTQLGV--LRHGKQIHGHVFHLGFQENSFISSALLDMYSN------------ 616
           +  S+LSA T +    + +G+  H     +GF ++ +++ AL+DMY+             
Sbjct: 432 TFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFH 491

Query: 617 ---CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               +S  AW+++ISA   HG     + LF +M  SG+ P    ++++L+AC + G+VD 
Sbjct: 492 ETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDA 551

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G   +++M  +  V    EH+ C+VDMLGR+G+L EA E +  +P  P      ++L AC
Sbjct: 552 GRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGAC 611

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             HGD ++G+++A +L + EP   G Y+ LSN+Y  +G W    ++ +
Sbjct: 612 RIHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRR 659



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 160/611 (26%), Positives = 278/611 (45%), Gaps = 55/611 (9%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H +++  G+   +++ N     YAK G   S+   F+     D  S+NTI+S       
Sbjct: 54  LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPD--- 110

Query: 155 PEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           P + L +   M  SG  + D V+ + A++ +A  GE    + +HAL  + G     +V  
Sbjct: 111 PAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVG- 169

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK-FEEAFDLLHEMQLMR 272
            N+L++ YS+ G +  A   F  M  +D+VSWNA+I G A +G    E   +   M    
Sbjct: 170 -NALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDG 228

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            V+PD  +V ++I  C     L  GR VHG+A++  +   + + N L+  Y K  +   A
Sbjct: 229 DVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSA 288

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKEMLYL----------CSQFSFSTLLAILPSCNSPE 382
             LF+A++   D+VSW + IS   ++ L L           ++ +F  L++ LP+ + P 
Sbjct: 289 RRLFDAMSE-RDVVSWTTAISMDGEDALTLFNGMRRDGVPPNEVTFVALMSALPA-DCPA 346

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWN 439
                + +H   LK   S      N+L+ MY       D    F L+ R     +   WN
Sbjct: 347 --RGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPR----REIIAWN 400

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE---LAFEGKSLHGL 496
            VI    QNG   +A++ F SM   +  +P+  T  +V+SA   +E   +A+ G+  H  
Sbjct: 401 AVISGYAQNGRCNDALELFSSMA--RCLTPNETTFASVLSAVTAVETVSMAY-GQMYHSR 457

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           AL    G    V  ALI MY +  +++ +   F      +L  W  +ISA +++ +    
Sbjct: 458 ALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAV 517

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           + LF  +      P+ + ++++L+AC   G++  G+ I           +S  +   +++
Sbjct: 518 MSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIF----------DSMAADRGVEL 567

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           +        +S ++   G  G+  EA EL   M      P+ S++ SLL AC   G  + 
Sbjct: 568 WPE-----HYSCVVDMLGRAGRLAEAEELMMRMPAG---PSVSALQSLLGACRIHGDAEI 619

Query: 674 GLQYYNNMLEE 684
           G +    + E+
Sbjct: 620 GERIARILTEK 630



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 223/500 (44%), Gaps = 28/500 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
           G  A +    +L+TAYS       + ++F +   +D+V+WNA+I    ++  C    +  
Sbjct: 161 GLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGV 220

Query: 61  FGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+ +G ++ D  ++  ++ A      L+ GR VH  ++K G+    S+ NV V MY 
Sbjct: 221 FLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYY 280

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG   S+   F  M   D VSW T +S        E  L  F  M   G   + V+  +
Sbjct: 281 KCGAPGSARRLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRDGVPPNEVTFVA 335

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A          +++HA  +K     S   + +NSLI+MY++   ++ A   F  M  
Sbjct: 336 LMSALPADCPARGAQMVHAACLKAAV--SGEAAASNSLITMYAKARRMDDARMVFDLMPR 393

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLREG 297
           +++++WNA+I G+A NG+  +A +L   M   R + P+  T  +++S     +++ +  G
Sbjct: 394 REIIAWNAVISGYAQNGRCNDALELFSSMA--RCLTPNETTFASVLSAVTAVETVSMAYG 451

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +  H  A+    G    +  +L+D Y+K  +L ++   F+       L++W ++IS    
Sbjct: 452 QMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETE-QRSLIAWTAIISANAR 510

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTI 404
                    LF +M           LLA+L +C     ++ G+ I        G      
Sbjct: 511 HGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPE 570

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             + ++ M    G L  A  L+ R+      S    ++ AC  +G  +   +  + +T++
Sbjct: 571 HYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIARILTEK 630

Query: 465 QNASPDS-VTLVNVISACGN 483
           +     + V L N+ +  G+
Sbjct: 631 EPTESGAYVLLSNIYADVGD 650


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 191/666 (28%), Positives = 327/666 (49%), Gaps = 60/666 (9%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+ +L  A  ++A L  L   + IH   ++         +V N+L++ Y++CGD+ AA  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  +D V++N++I    L  ++  A D L +M L          V  L++    + 
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 293 LLREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI----APMNDLV 346
            LR GR  H +A++   L G +    N+L+  Y++   +  A++LF ++    +P   +V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 347 SWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +WN+M+S L +            +M+    +    T  + LP+C+  E L  G+ +H + 
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 395 LK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQ 452
           LK    + N+   +AL+ MY +   +  A  +   +   +     WN ++    Q G  +
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLALKSLMGLDTRVQNA 511
           EA++ F  M  +    P   T+  V+ AC   E  F GK ++HG  LK  M  +  VQNA
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSE-TFAGKEAVHGYVLKRGMADNPFVQNA 416

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----- 566
           L+ +Y R  D+++A  +F +    ++ +WN +I+          A +L R ++ +     
Sbjct: 417 LMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTD 476

Query: 567 ----------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
                           PN ++++++L  C  L     GK+IHG+        +  + SAL
Sbjct: 477 ATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSAL 536

Query: 611 LDMYSNC--------------KSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPT 654
           +DMY+ C              K N   W+ +I AYG HG G EAI LF  M  S   +P 
Sbjct: 537 VDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPN 596

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
           + + I+ L+ACSHSG+VD G++ +++M   + V+P  + H C VD+LGR+G+L EAY  I
Sbjct: 597 EVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSII 656

Query: 715 KNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
            ++ P + +   W + L AC  H +  +G+  AE LF+LEP+   +Y+ L N+Y A G W
Sbjct: 657 TSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLW 716

Query: 774 KDAVEI 779
           + + E+
Sbjct: 717 EKSSEV 722



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 173/704 (24%), Positives = 312/704 (44%), Gaps = 68/704 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + +LLTAY+      ++LALF    ++D VT+N++I A    R  +  L    +M+ EG
Sbjct: 98  VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157

Query: 69  IRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMI-ADSSLC-NVFVNMYAKCGDLN 125
               S TL+ ++ A + +   L+ GR  H  ++K G +  D     N  ++MYA+ G ++
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217

Query: 126 SSECTFSGMHCADT-----VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            ++  F  +   D+     V+WNT++S  + +    + +    +M   G + D ++ +SA
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGM 237
           + A + L  LS G+ +HA  +K    DS   +   V ++L+ MY+    +  A R F  +
Sbjct: 278 LPACSQLEMLSLGREMHAYVLK----DSDLAANSFVASALVDMYASHERVGVARRVFDMV 333

Query: 238 TC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               + +  WNA++ G+A  G  EEA +L   M+    V P   T+  ++  CA S    
Sbjct: 334 PGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFA 393

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
              +VHGY ++R +  +  + N+LMD Y++   +  A  +F AI P  D+VSWN++I+G 
Sbjct: 394 GKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEP-RDVVSWNTLITGC 452

Query: 355 --------LFKEMLYLCSQFSFS---------------------TLLAILPSCNSPESLE 385
                    F+ +  +  Q  F+                     TL+ +LP C    +  
Sbjct: 453 VVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPA 512

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK IH + ++    ++    +AL+ MY  CG L  + ++  R+    +   WN++I+A 
Sbjct: 513 KGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAY 571

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGL 504
             +G   EAI  F  M     A P+ VT +  ++AC +  +   G  L H +     +  
Sbjct: 572 GMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQP 631

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISAFSQNK----AEVRALE 558
              +    + + GR   +  A ++  S       +  W+  + A   ++     E+ A  
Sbjct: 632 TPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAER 691

Query: 559 LFRHLEFEPNEIS-IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD--MYS 615
           LF   + EP+E S  V + +  +  G+     ++   +   G  +    S   LD  ++ 
Sbjct: 692 LF---QLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHR 748

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
                +A       + +    WE       M N G  P  SSV+
Sbjct: 749 FMAGESAHPESTLVHAHMDALWE------RMRNQGYTPDTSSVL 786



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 20/229 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +     +L+  Y+ +   E++  +F     +DVV+WN +IT CV    +      
Sbjct: 405 RGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQL 464

Query: 61  FGEMVEEGIRFDST------------------TLLIIVSALTQMNCLKQGRVVHCLSIKA 102
             EM ++G   D+T                  TL+ ++     +    +G+ +H  +++ 
Sbjct: 465 VREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRH 524

Query: 103 GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLY 161
            + +D ++ +  V+MYAKCG L  S   F  +   + ++WN  IM+  +H    E   L+
Sbjct: 525 ALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALF 584

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYG-KVIHALGIKLGYEDSP 209
            R +  +  + + V+  +A+AA +  G +  G ++ H++    G + +P
Sbjct: 585 DRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTP 633


>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 286/563 (50%), Gaps = 71/563 (12%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           LI  C D L  R G+ +H   +   +  D  + + L+ FYSKS S+  A  +F  I P  
Sbjct: 9   LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKI-PRK 67

Query: 344 DLVSWNSM-----ISGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPESLE 385
           ++ SWN++     +  +  ++L L S             +F+ +  L  L S  S   L 
Sbjct: 68  NIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGL- 126

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             K +H + L+ G   +   VNAL+  Y  C +LV A  +  R+    DT  WN ++   
Sbjct: 127 -AKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPER-DTVSWNAMLAGY 184

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +Q G ++E  + F+ M       P+++T V+V+ AC        G  +H    +S + +D
Sbjct: 185 SQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMD 244

Query: 506 TRVQNALITMYGRCRDIKSASTVFE--------------SCY-----------------N 534
             + NA+I +Y +C  +  A  +FE              S Y                  
Sbjct: 245 VSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQER 304

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQI 591
             L TWN +IS   QN  +  A+++FR ++     PN +++ SIL   +    L+ GK+I
Sbjct: 305 PRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEI 364

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HG+     +  N ++++A++D Y+ C               +S  AW+S+ISAY  HG  
Sbjct: 365 HGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDA 424

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
             A+ LF+EM  +GI+P + +  S+L+AC+HSG +DE  + +N +L EY ++P  EH+ C
Sbjct: 425 NVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYAC 484

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +V +L R+GKL +A EFI  +P++P   VWGA+L+  S  GD ++GK V + LF++EPEN
Sbjct: 485 MVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPEN 544

Query: 757 VGYYISLSNMYVALGRWKDAVEI 779
            G Y+ ++N+Y   GRWKDA  I
Sbjct: 545 TGNYVIMANLYSQSGRWKDADTI 567



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 129/560 (23%), Positives = 233/560 (41%), Gaps = 88/560 (15%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI-MS 147
            + G+ +H   + + ++ D+ L +  ++ Y+K G +  +   F  +   +  SWN + +S
Sbjct: 19  FRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFIS 78

Query: 148 GCLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELS-YGKVIHALGIKLG 204
             LHN + +   L+        +  + D  +++ ++ A A L   S   K +H+  ++ G
Sbjct: 79  YTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRG 138

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            E   +V   N+LI+ YS+C ++  A   F  M  +D VSWNA++ G++  G +EE  +L
Sbjct: 139 LEYDIFV--VNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKEL 196

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
              M     V+P+  T V+++  CA S  L  G  VH +     +  D+ + N+++  Y+
Sbjct: 197 FRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYA 256

Query: 325 KSNSLSKAELLFNAIAPMND-------------------------------LVSWNSMIS 353
           K   L  A  LF  + P  D                               L +WN++IS
Sbjct: 257 KCGILDYARELFEEM-PEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVIS 315

Query: 354 GL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           GL            F+ M     + +  TL +ILP  +   +L+ GK IH + ++  +  
Sbjct: 316 GLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDR 375

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N     A++  Y  CG L  A  +  +I   S  + W  +I A   +G    A+  F  M
Sbjct: 376 NIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIA-WTSIISAYAVHGDANVALSLFYEM 434

Query: 462 TQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
                  PD VT  +V++AC   G L+ A+                  ++ N L+  YG 
Sbjct: 435 L-TNGIQPDQVTFTSVLAACAHSGELDEAW------------------KIFNVLLPEYGI 475

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
              ++                + CM+   S+      A+E    +  EP      ++L+ 
Sbjct: 476 QPLVEH---------------YACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNG 520

Query: 579 CTQLGVLRHGKQIHGHVFHL 598
            +  G +  GK +   +F +
Sbjct: 521 ASVAGDVELGKYVFDRLFEI 540



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 218/535 (40%), Gaps = 78/535 (14%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE---- 66
           + L++ YS       +  +F +   K++ +WNA+  +   +      L  F  +V     
Sbjct: 42  SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNST 101

Query: 67  --EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             +  RF  T  L  +++L   + L   + VH   ++ G+  D  + N  +  Y++C +L
Sbjct: 102 DVKPDRFTVTCSLKALASLFSNSGL--AKEVHSFILRRGLEYDIFVVNALITFYSRCDEL 159

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAA 183
             +   F  M   DTVSWN +++G       E+C   FR M  S E   N ++  S + A
Sbjct: 160 VLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQA 219

Query: 184 SACLGELSYGKVIHAL----GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A   +L++G  +H       IK+       VS+ N++I +Y++CG ++ A   F  M  
Sbjct: 220 CAQSNDLTFGIEVHRFVNESQIKMD------VSLWNAVIGLYAKCGILDYARELFEEMPE 273

Query: 240 KDVV-------------------------------SWNAIIDGFALNGKFEEAFDLLHEM 268
           KD +                               +WNA+I G   N + E A D+   M
Sbjct: 274 KDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAM 333

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q      P+  T+ +++ + +    L+ G+ +HGYAIR     ++ +  +++D Y+K   
Sbjct: 334 Q-SHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGY 392

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A+L+F+ I     L++W S+IS             LF EML    Q    T  ++L 
Sbjct: 393 LHGAQLVFDQIKG-RSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLA 451

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFSLLQRI 429
           +C     L+       W++         G+  L+  Y          G L  A   + ++
Sbjct: 452 ACAHSGELD-----EAWKI-FNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKM 505

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGN 483
                   W  ++   +  G  +     F  + + +   + + V + N+ S  G 
Sbjct: 506 PLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGR 560



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 175/413 (42%), Gaps = 44/413 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +    +L+T YS       +  +F     +D V+WNAM+    +          
Sbjct: 137 RGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKEL 196

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+    ++ ++ T + ++ A  Q N L  G  VH    ++ +  D SL N  + +YA
Sbjct: 197 FRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYA 256

Query: 120 KCGDLNSSECTFSGMHCADTV-------------------------------SWNTIMSG 148
           KCG L+ +   F  M   D +                               +WN ++SG
Sbjct: 257 KCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISG 316

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + NN  E  +  FR M   G + + V+L+S +   +    L  GK IH   I+  Y+ +
Sbjct: 317 LVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRN 376

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            YV+   ++I  Y++CG +  A+  F  +  + +++W +II  +A++G    A  L +EM
Sbjct: 377 IYVA--TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEM 434

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-----YAIRRLLGYDLLMMNSLMDFY 323
            L   ++PD  T  ++++ CA S  L E   +       Y I+ L+ +   M+  L    
Sbjct: 435 -LTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVL---- 489

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILP 376
           S++  LS A    + +        W ++++G          ++ F  L  I P
Sbjct: 490 SRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEP 542


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 199/653 (30%), Positives = 318/653 (48%), Gaps = 92/653 (14%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALNG---KFEEAFDLL 265
           +++T+ LIS Y   G +  A          D  V  WN++I  +  NG   K    F L+
Sbjct: 59  LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           H +    S  PD  T   +   C +   +R G S H  ++      ++ + N+L+  YS+
Sbjct: 119 HSL----SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS--------TLL 372
             SLS A  +F+ ++ + D+VSWNS+I      G  K  L + S+ +          TL+
Sbjct: 175 CRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +LP C S  +   GK +HC+ +      N    N L+ MY  CG +  A ++   +S  
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS-V 292

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--------------------------- 465
            D   WN ++   +Q G F++A++ F+ M +++                           
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352

Query: 466 -------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-------DTRVQNA 511
                     P+ VTL++V+S C ++     GK +H  A+K  + L       +  V N 
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412

Query: 512 LITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELFRHL-----E 564
           LI MY +C+ + +A  +F+S      ++ TW  MI  +SQ+    +ALEL   +     +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS---FISSALLDMYSNC---- 617
             PN  +I   L AC  L  LR GKQIH +   L  Q+N+   F+S+ L+DMY+ C    
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYA--LRNQQNAVPLFVSNCLIDMYAKCGSIS 530

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      K+   W+S+++ YG HG G EA+ +F EM   G +    +++ +L ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           HSG++D+G++Y+N M   + V P  EH+ C+VD+LGR+G+L  A   I+ +P++P P VW
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            A LS C  HG  ++G+  AE + +L   + G Y  LSN+Y   GRWKD   I
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/588 (25%), Positives = 269/588 (45%), Gaps = 71/588 (12%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           L  ++ L++ Y +V     +++L   +   +  V  WN++I +  +N C    L+ FG M
Sbjct: 59  LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
                  D+ T   +  A  +++ ++ G   H LS+  G I++  + N  V MY++C  L
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAA 183
           + +   F  M   D VSWN+I+        P+  L  F  M    G + DN++L + +  
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A LG  S GK +H   +      + +V   N L+ MY++CG ++ A   F  M+ KDVV
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVG--NCLVDMYAKCGMMDEANTVFSNMSVKDVV 296

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQ---------------------------------- 269
           SWNA++ G++  G+FE+A  L  +MQ                                  
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-------GYDLLMMNSLMDF 322
           L   ++P+  T+++++S CA    L  G+ +H YAI+  +       G + +++N L+D 
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416

Query: 323 YSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
           Y+K   +  A  +F++++P   D+V+W  MI G            L  EM     Q   +
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476

Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFS 424
             T+   L +C S  +L  GK IH + L+     N + +   N L+ MY  CG +  A  
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGSISDARL 534

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   +   ++ + W  ++     +G+ +EA+  F  M ++     D VTL+ V+ AC + 
Sbjct: 535 VFDNMMAKNEVT-WTSLMTGYGMHGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHS 592

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
            +  +G       +K++ G+    ++   L+ + GR   + +A  + E
Sbjct: 593 GMIDQGMEYFN-RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 147/598 (24%), Positives = 263/598 (43%), Gaps = 81/598 (13%)

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
           A    WN+++     N    KCL  F  M       DN +      A   +  +  G+  
Sbjct: 90  AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           HAL +  G+  + +V   N+L++MYS+C  +  A + F  M+  DVVSWN+II+ +A  G
Sbjct: 150 HALSLVTGFISNVFVG--NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           K + A ++   M       PD  T+V ++  CA       G+ +H +A+   +  ++ + 
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM----- 359
           N L+D Y+K   + +A  +F+ ++ + D+VSWN+M++G            LF++M     
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMS-VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326

Query: 360 -----------------------LYLCSQFSFS-------TLLAILPSCNSPESLEFGKS 389
                                  L +C Q   S       TL+++L  C S  +L  GK 
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386

Query: 390 IHCWQLKL-------GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIV 441
           IHC+ +K        G  +  + +N L+ MY  C  +  A ++   +S    D   W ++
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           I   +Q+G   +A++    M ++     P++ T+   + AC +L     GK +H  AL++
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506

Query: 501 LM-GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               +   V N LI MY +C  I  A  VF++    N  TW  +++ +  +     AL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 560 F---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F   R + F+ + ++++ +L AC+  G++  G +      +    +  F  S   + Y  
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME------YFNRMKTVFGVSPGPEHY-- 618

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                  + ++   G  G+   A+ L  EM    + P     ++ LS C   G V+ G
Sbjct: 619 -------ACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVELG 666



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 243/539 (45%), Gaps = 63/539 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++++    +L+  YS       +  +F E    DVV+WN++I +  +     + L  F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M  E G R D+ TL+ ++     +     G+ +HC ++ + MI +  + N  V+MYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLH----------------------------- 151
           CG ++ +   FS M   D VSWN +++G                                
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336

Query: 152 -NNYPEKCLLY-----FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL-- 203
            + Y ++ L Y      R+M  SG + + V+L S ++  A +G L +GK IH   IK   
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396

Query: 204 -----GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK--DVVSWNAIIDGFALNG 256
                G+ D     V N LI MY++C  ++ A   F  ++ K  DVV+W  +I G++ +G
Sbjct: 397 DLRKNGHGDENM--VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454

Query: 257 KFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLL 314
              +A +LL EM +      P+  T+   +  CA    LR G+ +H YA+R +     L 
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYL 362
           + N L+D Y+K  S+S A L+F+ +   N+ V+W S+++            G+F EM  +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGIFDEMRRI 573

Query: 363 CSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             +    TLL +L +C+    ++ G +  +  +   G S        L+ +    G L A
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           A  L++ +        W   +  C  +G  +      + +T+  +    S TL++ + A
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 210/515 (40%), Gaps = 88/515 (17%)

Query: 306 RRLLGYDLLMMN---SLMDFYSKSNSLSKAELLFNAIAPMNDLV-SWNSMIS-------- 353
           ++LL + +L +N    L+  Y     LS A  L     P +  V  WNS+I         
Sbjct: 49  QKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCA 108

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                  GL   + +    ++F     +  +C    S+  G+S H   L  GF +N    
Sbjct: 109 NKCLYLFGLMHSLSWTPDNYTFPF---VFKACGEISSVRCGESAHALSLVTGFISNVFVG 165

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ MY  C  L  A  +   +S   D   WN +I +  + G  + A++ F  MT +  
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD++TLVNV+  C +L     GK LH  A+ S M  +  V N L+ MY +C  +  A+
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-------------------- 566
           TVF +    ++ +WN M++ +SQ      A+ LF  ++ E                    
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344

Query: 567 ------------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHL-------GFQ 601
                             PNE++++S+LS C  +G L HGK+IH +           G  
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404

Query: 602 ENSFISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKGWEAIELFH 644
           + + + + L+DMY+ CK                     W+ MI  Y  HG   +A+EL  
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464

Query: 645 EMCNSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           EM       RP   ++   L AC+    +  G Q +   L             C++DM  
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + G + +A     N+ +      W ++++    HG
Sbjct: 525 KCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 201/655 (30%), Positives = 321/655 (49%), Gaps = 96/655 (14%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALNGKFEE---AFDLL 265
           +++T+ LIS Y   G +  A          D  V  WN++I  +  NG+  +   +F L+
Sbjct: 59  LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLM 118

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFY 323
           H +    S  PD  T   +   C +   +R G S H  A+ R+ G+  ++ + N+L+  Y
Sbjct: 119 HSL----SWTPDNYTFPFVFKACGEISSVRCGDSSH--ALSRVTGFMSNVFVGNALVAMY 172

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EML-YLCSQFSFS----T 370
           S+  SLS A  +F+ + P+ D+VSWNS+I    K        EM   + ++F F     T
Sbjct: 173 SRCGSLSDARKVFDEM-PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDIT 231

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L+ +LP C S  +   GK  H + +      N    N L+ MY   G +  A ++   + 
Sbjct: 232 LVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP 291

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ------------------------- 465
              D   WN ++   +Q G F++A++ F+ M +++                         
Sbjct: 292 -VKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350

Query: 466 ---------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-------DTRVQ 509
                       P+ VTL++V+S C ++     GK +H  A+K  M L       +  V 
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVI 410

Query: 510 NALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELFRHL---- 563
           N LI MY +C+ +  A  +F+S      ++ TW  MI  +SQ+    +ALEL   +    
Sbjct: 411 NQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS---FISSALLDMYSNC-- 617
            +  PN  +I   L AC  L  L  GKQIH +   L  Q+N+   F+S+ L+DMY+ C  
Sbjct: 471 CQTRPNAFTISCALVACASLAALSIGKQIHAYA--LRNQQNAVPLFVSNCLIDMYAKCGD 528

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K+   W+S+++ YG HG G EA+ +F EM   G +    +++ +L A
Sbjct: 529 IGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYA 588

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSHSG++D+G++Y+N M  ++ V P  EH+ C+VD+LGR+G+L  A   I+ +P++P P 
Sbjct: 589 CSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           VW A+LS C  HG  ++G+  A+ + +L   N G Y  LSNMY   GRWKD   I
Sbjct: 649 VWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRI 703



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 171/726 (23%), Positives = 315/726 (43%), Gaps = 103/726 (14%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           F ++ L I    + +   + Q +++H   +  G++   +L +  ++ Y   G L+ +   
Sbjct: 23  FSTSALEITPPFIHKCKTISQVKLIHQKLLSFGILT-LNLTSHLISTYISLGCLSHAVSL 81

Query: 131 FSGMHCAD--TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
                 +D     WN+++    +N    KCL  F  M       DN +      A   + 
Sbjct: 82  LRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEIS 141

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G   HAL    G+  + +V   N+L++MYS+CG +  A + F  M   DVVSWN+I
Sbjct: 142 SVRCGDSSHALSRVTGFMSNVFVG--NALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSI 199

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I+ +A  GK + A ++  +M       PD  T+V ++  CA       G+  HG+A+   
Sbjct: 200 IESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSE 259

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +  ++ + N L+D Y+K   + +A  +F+ + P+ D+VSWN+M++G            LF
Sbjct: 260 MIQNMFVGNCLVDMYAKFGMMDEANTVFSNM-PVKDVVSWNAMVAGYSQIGRFEDAVRLF 318

Query: 357 KEM----------------------------LYLCSQFSFS-------TLLAILPSCNSP 381
           ++M                            L +C Q   S       TL+++L  C S 
Sbjct: 319 EQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378

Query: 382 ESLEFGKSIHCWQLKL-------GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNS 433
            +L  GK IHC+ +K        G  +  + +N L+ MY  C  +  A ++   +S    
Sbjct: 379 GALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKER 438

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVISACGNLELAFEGKS 492
           D   W ++I   +Q+G   +A++    M ++     P++ T+   + AC +L     GK 
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQ 498

Query: 493 LHGLALKSLM-GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           +H  AL++    +   V N LI MY +C DI  A  VF++    N  TW  +++ +  + 
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHG 558

Query: 552 AEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL +F   R + F+ + ++++ +L AC+  G++  G +      +    +  F  S
Sbjct: 559 YGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME------YFNRMKTDFGVS 612

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
              + Y         + ++   G  G+   A+ L  EM    + P     ++LLS C   
Sbjct: 613 PGPEHY---------ACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVALLSCCRIH 660

Query: 669 GLVDEGLQYYNNMLEEYDVRPETE-------HHVCIVDMLGRSGKLQEAYE---FIKNLP 718
           G V+ G         EY  +  TE        +  + +M   +G+ ++       +++  
Sbjct: 661 GKVELG---------EYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKG 711

Query: 719 IQPKPG 724
           I+ +PG
Sbjct: 712 IKKRPG 717



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 162/708 (22%), Positives = 303/708 (42%), Gaps = 115/708 (16%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           L  ++ L++ Y ++     +++L   +   +  V  WN++I +   N      L  F  M
Sbjct: 59  LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLM 118

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
                  D+ T   +  A  +++ ++ G   H LS   G +++  + N  V MY++CG L
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSL 178

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAA 183
           + +   F  M   D VSWN+I+        P+  L  F +M    G + D+++L + +  
Sbjct: 179 SDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPP 238

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A +G  S GK  H  G  +  E    + V N L+ MY++ G ++ A   F  M  KDVV
Sbjct: 239 CASVGTRSLGKQFH--GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVV 296

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQ---------------------------------- 269
           SWNA++ G++  G+FE+A  L  +MQ                                  
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-------GYDLLMMNSLMDF 322
           L   ++P+  T+++++S CA    L  G+ +H YAI+  +       G + +++N L+D 
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDM 416

Query: 323 YSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
           Y+K   +  A  +F++++P   D+V+W  MI G            L  EM     Q   +
Sbjct: 417 YAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476

Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFS 424
             T+   L +C S  +L  GK IH + L+     N + +   N L+ MY  CGD+  A  
Sbjct: 477 AFTISCALVACASLAALSIGKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGDIGDARL 534

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   +   ++ + W  ++     +G+ +EA+  F+ M ++     D VTL+ V+ AC + 
Sbjct: 535 VFDNMMEKNEVT-WTSLMTGYGMHGYGEEALGIFEEM-RRIGFKLDGVTLLVVLYACSHS 592

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            +  +G       +K+  G+    ++                             + C++
Sbjct: 593 GMIDQGMEYFN-RMKTDFGVSPGPEH-----------------------------YACLV 622

Query: 545 SAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
               +      AL L   +  EP  +  V++LS C          +IHG V     +   
Sbjct: 623 DLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCC----------RIHGKV-----ELGE 667

Query: 605 FISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           + +  + ++ SN  ++ +++ + + Y   G+  +   +   M + GI+
Sbjct: 668 YAAKKITELASN--NDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIK 713



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/535 (25%), Positives = 238/535 (44%), Gaps = 63/535 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++++    +L+  YS       +  +F E    DVV+WN++I +  +     M L  F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M  E G R D  TL+ ++     +     G+  H  ++ + MI +  + N  V+MYAK
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLH----------------------------- 151
            G ++ +   FS M   D VSWN +++G                                
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336

Query: 152 -NNYPEKCLLYF-----REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL-- 203
            + Y ++ L Y      R+M  SG + + V+L S ++  A +G L +GK IH   IK   
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396

Query: 204 -----GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK--DVVSWNAIIDGFALNG 256
                G+ D     V N LI MY++C  ++ A   F  ++ K  DVV+W  +I G++ +G
Sbjct: 397 DLRKNGHGDENM--VINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHG 454

Query: 257 KFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLL 314
              +A +LL EM +      P+  T+   +  CA    L  G+ +H YA+R +     L 
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYL 362
           + N L+D Y+K   +  A L+F+ +   N+ V+W S+++            G+F+EM  +
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNE-VTWTSLMTGYGMHGYGEEALGIFEEMRRI 573

Query: 363 CSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             +    TLL +L +C+    ++ G +  +  +   G S        L+ +    G L A
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           A  L++ +        W  ++  C  +G  +      K +T+  + +  S TL++
Sbjct: 634 ALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLS 688



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 217/532 (40%), Gaps = 86/532 (16%)

Query: 306 RRLLGYDLLMMN---SLMDFYSKSNSLSKAELLFNAIAPMNDLV-SWNSMISGLF----- 356
           ++LL + +L +N    L+  Y     LS A  L     P +  V  WNS+I         
Sbjct: 49  QKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRA 108

Query: 357 -KEMLYLCSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            K +   C   S S      T   +  +C    S+  G S H      GF +N    NAL
Sbjct: 109 NKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNAL 168

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A  +   +    D   WN +I +  + G  + A++ F  MT +    P
Sbjct: 169 VAMYSRCGSLSDARKVFDEMP-VWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRP 227

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D +TLVNV+  C ++     GK  HG A+ S M  +  V N L+ MY +   +  A+TVF
Sbjct: 228 DDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVF 287

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----------------------- 566
            +    ++ +WN M++ +SQ      A+ LF  ++ E                       
Sbjct: 288 SNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGY 347

Query: 567 ---------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHL-------GFQENS 604
                          PNE++++S+LS C  +G L HGK+IH +           G  + +
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDEN 407

Query: 605 FISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKGWEAIELFHEMC 647
            + + L+DMY+ CK                     W+ MI  Y  HG   +A+EL  EM 
Sbjct: 408 MVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467

Query: 648 NSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
                 RP   ++   L AC+    +  G Q +   L             C++DM  + G
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHH--GDTKMG--KQVAELLFKLE 753
            + +A     N+ ++     W ++++    H  G+  +G  +++  + FKL+
Sbjct: 528 DIGDARLVFDNM-MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLD 578


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 185/606 (30%), Positives = 298/606 (49%), Gaps = 39/606 (6%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P +   NS +    + G I  A   F  M+ +D +SW  +I G+       EA  L   M
Sbjct: 82  PNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM 141

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +   ++ D   V   +  CA  + +  G  +HG++++  L   + + ++L+D Y K   
Sbjct: 142 WVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGK 201

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILP 376
             +   +F  +   N +VSW ++I GL            F EM      +   T    L 
Sbjct: 202 TEQGCSVFENMTTRN-VVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALK 260

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +      L +GK+IH   +K GF+     VN L  MY  C        L  ++S   D  
Sbjct: 261 ASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMS-TPDVV 319

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I+   Q G  + A+  FK M ++ + SP+  T  +VISAC NL +   G+ +HG 
Sbjct: 320 SWTNLIMTYVQMGDEERALDAFKRM-RKSDVSPNEYTFASVISACANLAITKWGEQIHGH 378

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           AL+  +     V N++IT+Y +C  ++ AS VF+     ++ +W+ +IS + Q      A
Sbjct: 379 ALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGS---HA 435

Query: 557 LELFRHLEF------EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            E F +L +      +PNE ++ S+LS C  + +L  GKQ+H +   +G    + + SAL
Sbjct: 436 KEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSAL 495

Query: 611 LDMYS-------------NCKSN--AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           + MYS             + K+N   +W++MI+ Y  HG   EAI LF  + + G+ P  
Sbjct: 496 ISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDY 555

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + I +L+AC+H+GLVD G  YY  M  EY + P  EH+ CI+D+L R+G+L EA   ++
Sbjct: 556 VTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVR 615

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           N+P      VW  +L AC  HGD       AE + +L P + G +I+L+N+Y A GR ++
Sbjct: 616 NMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREE 675

Query: 776 AVEIGK 781
           A  + K
Sbjct: 676 AAHVRK 681



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 247/508 (48%), Gaps = 22/508 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  S++L+  Y  V   E   ++F     ++VV+W A+I   V   C + GL +F
Sbjct: 181 GLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYF 240

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    + +DS T  + + A  +   L  G+ +H  +IK G    + + N    MY+KC
Sbjct: 241 SEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKC 300

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
              +     F  M   D VSW  ++   +     E+ L  F+ M  S    +  + +S +
Sbjct: 301 RKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVI 360

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L    +G+ IH   ++LG  D+  +SV+NS+I++YS+CG ++ A   F GMT KD
Sbjct: 361 SACANLAITKWGEQIHGHALRLGLVDA--LSVSNSIITLYSKCGLLQEASLVFDGMTRKD 418

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW+ II  +      +EAF+ L  M      +P+   + +++S+C    LL  G+ VH
Sbjct: 419 IISWSTIISVYCQGSHAKEAFNYLSWMS-REGPKPNEFALASVLSVCGSMALLEPGKQVH 477

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA+   L ++ ++ ++L+  YS+S +L +A  +F++I   ND+VSW +MI+G       
Sbjct: 478 AYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKN-NDIVSWTAMINGYAEHGYS 536

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG---KSIHCWQLKLGFSNNTIGV 406
                LF+ +  +     + T + IL +CN    ++ G     +   + ++  S    G 
Sbjct: 537 QEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYG- 595

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQ 465
             ++ +    G L  A  +++ +    D   W+ ++ AC  +G    AI   + M +   
Sbjct: 596 -CIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHP 654

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSL 493
           N++   +TL N+ SA G  E A   + L
Sbjct: 655 NSAGAHITLANIYSASGRREEAAHVRKL 682



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 242/502 (48%), Gaps = 22/502 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           ++ ++P   S L     +     +  +F +  ++D ++W  +I   V        L  F 
Sbjct: 80  YVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFS 139

Query: 63  EM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M V+ G++ D   + + + A      +  G ++H  S+K+G+I    + +  V+MY K 
Sbjct: 140 NMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKV 199

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G        F  M   + VSW  ++ G +H       L YF EM  S    D+ + + A+
Sbjct: 200 GKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVAL 259

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ASA  G L YGK IHA  IK G+ ++ Y  V N+L +MYS+C   +   R F  M+  D
Sbjct: 260 KASAESGLLHYGKAIHAQTIKQGFNETAY--VVNTLGTMYSKCRKPDYVMRLFGKMSTPD 317

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  +I  +   G  E A D    M+    V P+  T  ++IS CA+  + + G  +H
Sbjct: 318 VVSWTNLIMTYVQMGDEERALDAFKRMR-KSDVSPNEYTFASVISACANLAITKWGEQIH 376

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G+A+R  L   L + NS++  YSK   L +A L+F+ +    D++SW+++IS        
Sbjct: 377 GHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMT-RKDIISWSTIISVYCQGSHA 435

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           KE     S  S          L ++L  C S   LE GK +H + L +G  + T+  +AL
Sbjct: 436 KEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSAL 495

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY   G+L  A  +   I +N D   W  +I    ++G+ QEAI  F++++      P
Sbjct: 496 ISMYSRSGNLQEASKIFDSIKNN-DIVSWTAMINGYAEHGYSQEAISLFENIS-SVGLMP 553

Query: 470 DSVTLVNVISAC---GNLELAF 488
           D VT + +++AC   G ++L F
Sbjct: 554 DYVTFIGILTACNHAGLVDLGF 575



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 175/359 (48%), Gaps = 16/359 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF        +L T YS     +  + LF +    DVV+W  +I   V+       L  
Sbjct: 281 QGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDA 340

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M +  +  +  T   ++SA   +   K G  +H  +++ G++   S+ N  + +Y+K
Sbjct: 341 FKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSK 400

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  +   F GM   D +SW+TI+S     ++ ++   Y   M   G + +  +L+S 
Sbjct: 401 CGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASV 460

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++    +  L  GK +HA  + +G +    V   ++LISMYS+ G+++ A + F  +   
Sbjct: 461 LSVCGSMALLEPGKQVHAYALCIGLDHETMVH--SALISMYSRSGNLQEASKIFDSIKNN 518

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSW A+I+G+A +G  +EA  L   +  +  + PD  T + +++ C  + L+      
Sbjct: 519 DIVSWTAMINGYAEHGYSQEAISLFENISSV-GLMPDYVTFIGILTACNHAGLVD----- 572

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAE-LLFNAIAPMNDLVSWNSMI 352
            G+   +L+  +  +  S      ++D   ++  LS+AE ++ N   P +D+V W++++
Sbjct: 573 LGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV-WSTLL 630


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 188/622 (30%), Positives = 325/622 (52%), Gaps = 51/622 (8%)

Query: 200 GIKLGYEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           G +  +++ P+ ++  TN++I  Y + G++  A   F  M  +  V+W  +I G+A N +
Sbjct: 119 GARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQ 178

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLM 315
           F EAF L  EM     ++PD  ++ TL+S   +   + E R VH + I+  LGYD  L++
Sbjct: 179 FREAFGLFIEMG-RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIK--LGYDSTLVV 235

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML--------------- 360
            NSL+D Y K+ SL  A  LFN I P  D V++N++++G  KE                 
Sbjct: 236 SNSLLDSYCKTRSLGLAFQLFNDI-PERDSVTFNALLTGYSKEGFNREAINLFFKMQEVG 294

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           Y  ++F+F+   AIL +    + +EFG+ +H + +K  F  N    NAL+  Y     +V
Sbjct: 295 YRPTEFTFA---AILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVV 351

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVI 478
            A  L   +    D   +N+++     NG  +E+++ FK +  T     +    TL+++ 
Sbjct: 352 EASKLFYEMPE-VDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIA 410

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           +   NL++   G+ +H   + +    +  V N+L+ MY +C +   A+ +F      +  
Sbjct: 411 AISLNLDI---GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSV 467

Query: 539 TWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  MIS++ Q       L+LF  ++      +  +  SI+ AC  L  L  GKQ+H H+
Sbjct: 468 PWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              G+  N F  SAL+DMY+ C               +++ +W+++ISAY  +G G   +
Sbjct: 528 IGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTL 587

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF EM  SG++P   S++S+L ACSH GLV+EGLQY+++M   Y + P+ EH+   +DM
Sbjct: 588 RLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDM 647

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP-ENVGY 759
           L R G+  EA + +  +P +P   +W ++L++C  H + ++ K+ A  LF ++   +   
Sbjct: 648 LCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+++SN+Y A G W +  ++ K
Sbjct: 708 YVTMSNIYAAAGEWDNVGKVKK 729



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 250/543 (46%), Gaps = 64/543 (11%)

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLN-------------------------------SSE 128
           IK G   ++   N  V  + + GDLN                                + 
Sbjct: 93  IKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEAR 152

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M     V+W  ++ G   NN   +    F EMG  G   D+VSL++ ++      
Sbjct: 153 TLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFD 212

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            ++  + +H+  IKLGY+ +  + V+NSL+  Y +   +  A + F  +  +D V++NA+
Sbjct: 213 SVNEVRQVHSHVIKLGYDST--LVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNAL 270

Query: 249 IDGFALNGKFEEAFDLLHEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           + G++  G   EA +L  +MQ +  R  E   A ++T      D   +  G+ VHG+ ++
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDD---IEFGQQVHGFVVK 327

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
               +++ + N+L+DFYSK + + +A  LF  + P  D +S+N +++             
Sbjct: 328 CNFVWNVFVANALLDFYSKHDRVVEASKLFYEM-PEVDGISYNVLVTCYAWNGRVKESLE 386

Query: 355 LFKEMLYLC---SQFSFSTLLAILP-SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           LFKE+ +       F F+TLL+I   S N    L+ G+ IH   +     +  +  N+L+
Sbjct: 387 LFKELQFTGFDRRNFPFATLLSIAAISLN----LDIGRQIHSQTIVTDAISEILVGNSLV 442

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG+   A  +   ++  S    W  +I +  Q G  ++ +K F  M Q+     D
Sbjct: 443 DMYAKCGEFGEANRIFSDLAIQSSVP-WTAMISSYVQKGLHEDGLKLFVEM-QRAKIGAD 500

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           + T  +++ AC +L     GK LH   + S    +    +AL+ MY +C  IK A  +F+
Sbjct: 501 AATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQ 560

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
                N  +WN +ISA++QN      L LF  +     +P+ +S++SIL AC+  G++  
Sbjct: 561 EMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEE 620

Query: 588 GKQ 590
           G Q
Sbjct: 621 GLQ 623



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 231/494 (46%), Gaps = 18/494 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           ++ +++  Y        +  LF     +  VTW  +I    +N         F EM   G
Sbjct: 134 STNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHG 193

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  D  +L  ++S  T+ + + + R VH   IK G  +   + N  ++ Y K   L  + 
Sbjct: 194 IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAF 253

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+ +   D+V++N +++G     +  + +  F +M   G +    + ++ + A   L 
Sbjct: 254 QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++ +G+ +H   +K  +  + +V+  N+L+  YS+   +  A + F+ M   D +S+N +
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVA--NALLDFYSKHDRVVEASKLFYEMPEVDGISYNVL 371

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +  +A NG+ +E+ +L  E+Q     +       TL+S+ A SL L  GR +H   I   
Sbjct: 372 VTCYAWNGRVKESLELFKELQFT-GFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD 430

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              ++L+ NSL+D Y+K     +A  +F+ +A +   V W +MIS             LF
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLA-IQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM         +T  +I+ +C S  SL  GK +H   +  G+ +N    +AL+ MY  C
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  + Q +   +  S WN +I A  QNG     ++ F+ M  +    PDSV+L++
Sbjct: 550 GSIKDALQMFQEMPVRNSVS-WNALISAYAQNGDGDCTLRLFEEMV-RSGLQPDSVSLLS 607

Query: 477 VISACGNLELAFEG 490
           ++ AC +  L  EG
Sbjct: 608 ILCACSHCGLVEEG 621



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 225/501 (44%), Gaps = 54/501 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + L  S SLL +Y        +  LF +   +D VT+NA++T   +       ++ F
Sbjct: 228 GYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLF 287

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E G R    T   I++A  Q++ ++ G+ VH   +K   + +  + N  ++ Y+K 
Sbjct: 288 FKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKH 347

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  M   D +S+N +++    N   ++ L  F+E+ ++G    N   ++ +
Sbjct: 348 DRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLL 407

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           + +A    L  G+ IH+  I    +    + V NSL+ MY++CG+   A R F  +  + 
Sbjct: 408 SIAAISLNLDIGRQIHSQTIVT--DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQS 465

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V W A+I  +   G  E+   L  EMQ  + +  D AT  +++  CA    L  G+ +H
Sbjct: 466 SVPWTAMISSYVQKGLHEDGLKLFVEMQRAK-IGADAATYASIVRACASLASLTLGKQLH 524

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + I      ++   ++L+D Y+K  S+  A  +F  + P+ + VSWN++IS        
Sbjct: 525 SHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEM-PVRNSVSWNALISAYAQNGDG 583

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+EM+    Q    +LL+IL +C+           HC  ++ G           
Sbjct: 584 DCTLRLFEEMVRSGLQPDSVSLLSILCACS-----------HCGLVEEGLQ--------- 623

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
              Y +   +   + L+ +  H + T      I    + G F EA K    +  Q    P
Sbjct: 624 ---YFD--SMTRIYKLVPKKEHYAST------IDMLCRGGRFDEAEK----LMAQMPFEP 668

Query: 470 DSVTLVNVISACG---NLELA 487
           D +   +V+++CG   N ELA
Sbjct: 669 DEIMWSSVLNSCGIHKNQELA 689



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 182/433 (42%), Gaps = 65/433 (15%)

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L   ++  C++   +TL A  P  +   S+          +K GF+ NT   N L+  ++
Sbjct: 63  LMNNIIKPCTRNLVTTLTAPKPHLHVDASI----------IKTGFNPNTYRSNFLVKSFL 112

Query: 415 NCGDLVAAFSLLQRISHNSDTS------------------------------CWNIVIVA 444
             GDL  A  L   + H +  S                               W ++I  
Sbjct: 113 QRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGG 172

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             QN  F+EA   F  M  +    PD V+L  ++S     +   E + +H   +K  +G 
Sbjct: 173 YAQNNQFREAFGLFIEMG-RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIK--LGY 229

Query: 505 DTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           D+   V N+L+  Y + R +  A  +F      +  T+N +++ +S+      A+ LF  
Sbjct: 230 DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFK 289

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK- 618
           ++   + P E +  +IL+A  QL  +  G+Q+HG V    F  N F+++ALLD YS    
Sbjct: 290 MQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDR 349

Query: 619 --------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                            +++ +++ Y ++G+  E++ELF E+  +G         +LLS 
Sbjct: 350 VVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI 409

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
            + S  +D G Q ++  +   D   E      +VDM  + G+  EA     +L IQ    
Sbjct: 410 AAISLNLDIGRQIHSQTIVT-DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP 468

Query: 725 VWGAMLSACSHHG 737
            W AM+S+    G
Sbjct: 469 -WTAMISSYVQKG 480



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 5/277 (1%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           ++ +    SL+  Y+    F  +  +F +   +  V W AMI++ V+      GL  F E
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M    I  D+ T   IV A   +  L  G+ +H   I +G I++    +  V+MYAKCG 
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +  +   F  M   ++VSWN ++S    N   +  L  F EM  SG Q D+VSL S + A
Sbjct: 552 IKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCA 611

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DV 242
            +  G +  G        ++ Y+  P      S I M  + G  + AE+    M  + D 
Sbjct: 612 CSHCGLVEEGLQYFDSMTRI-YKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDE 670

Query: 243 VSWNAIIDGFALNGKFE---EAFDLLHEMQLMRSVEP 276
           + W+++++   ++   E   +A + L  M+++R   P
Sbjct: 671 IMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 193/682 (28%), Positives = 344/682 (50%), Gaps = 41/682 (6%)

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +G+  +D +S   I       N+ E   LY  E+  SG Q  +  +  ++  +      +
Sbjct: 8   AGLRLSDLIS--KIKDASYSGNWQEALQLY-HEIRISGAQLSDTWVLPSILKACSNTSFN 64

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   IK G + S   S+ NS I  Y + GD+++A+RAF     KD VSWN ++ G
Sbjct: 65  LGTAMHGCLIKQGCQSS--TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG 122

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              NG          + +     +P+I++++ +I    +  +  +G + HGY  R     
Sbjct: 123 NFSNGSIMAGLCWFIKGRFAH-FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSA 181

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            L + NSL+  Y++ + +  A  LF  ++  ND+VSW+ MI G            +F+ M
Sbjct: 182 ILSVQNSLLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNM 240

Query: 360 LYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +          T++++L +C + + +  G  +H   +  G  ++    N+L+ MY  C +
Sbjct: 241 VTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFN 300

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + +AF   + I   +  S WN+++ A   N    EA+    +M ++  A  D VTL NV+
Sbjct: 301 VHSAFKAFKEIPEKNIIS-WNLMLSAYILNESHLEALALLGTMVRE-GAEKDEVTLANVL 358

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
               +   + + +S+HG+ ++     +  + N++I  Y +C  ++ A  VF+     ++ 
Sbjct: 359 QIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVV 418

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE--PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
            W+ MI+ F++N     A+ +F+ +  E  PN +SI++++ AC     LR  K  HG   
Sbjct: 419 AWSTMIAGFARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV 478

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G      I ++++DMYS C               K+   WS+MISA+  +G   EA+ 
Sbjct: 479 RRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALM 538

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF ++  +G +P   + +SLLSACSH GL++EGL ++ +M++++ + P  EH+ CIVDML
Sbjct: 539 LFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDML 598

Query: 702 GRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
            R+GK  EA E I+ LP + + G  +WG +LS+C  +G+  +G   A  + +LEP +   
Sbjct: 599 SRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAG 658

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+  SN+Y   G   D+ ++ +
Sbjct: 659 YMLASNLYANCGLMIDSAKMRR 680



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 175/640 (27%), Positives = 298/640 (46%), Gaps = 51/640 (7%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L  + E+   G +   T +L  +           G  +H   IK G  + +S+ N  ++
Sbjct: 31  ALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTID 90

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y K GDL+S++  F      D+VSWN ++ G   N      L +F +  ++  Q +  S
Sbjct: 91  FYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISS 150

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L   + A   L   S G   H    + G+  S  +SV NSL+S+Y++   +  A + F  
Sbjct: 151 LLLVIQAFRELKIYSQGFAFHGYIFRSGF--SAILSVQNSLLSLYAEV-HMYFAYKLFGE 207

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M+ + DVVSW+ +I GF   G+ E+ F +   M     + PD  TVV+++  C +   + 
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
            G  VHG  I R L  DL + NSL+D YSK  ++  A   F  I P  +++SWN M+S  
Sbjct: 268 LGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI-PEKNIISWNLMLSAY 326

Query: 354 ----------GLFKEMLYLCSQFSFSTLLAILP-SCNSPESLEFGKSIHCWQLKLGFSNN 402
                      L   M+   ++    TL  +L  + +  +SL+  +S+H   ++ G+ +N
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKGYESN 385

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            + +N+++  Y  C +LV    ++    +  D   W+ +I    +NG   EAI  FK M 
Sbjct: 386 ELLLNSVIDAYAKC-NLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMN 444

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           ++    P++V+++N++ AC       + K  HG+A++  +  +  +  ++I MY +C DI
Sbjct: 445 EE--VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDI 502

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
           +++   F      N+  W+ MISAF  N     AL LF  ++    +PN ++ +S+LSAC
Sbjct: 503 EASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSAC 562

Query: 580 TQLGVLRHG-----KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +  G++  G       +  H    G +  S I    +DM S                  G
Sbjct: 563 SHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCI----VDMLSRA----------------G 602

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           K  EA+EL  ++    +    S   +LLS+C   G +  G
Sbjct: 603 KFNEALELIEKLPKE-MEAGASIWGTLLSSCRSYGNISLG 641



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 248/497 (49%), Gaps = 20/497 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + S +  Y      +S+   F  T NKD V+WN M+     N  ++ GL +F +      
Sbjct: 85  ANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHF 144

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + + ++LL+++ A  ++    QG   H    ++G  A  S+ N  +++YA+   +  +  
Sbjct: 145 QPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYK 203

Query: 130 TFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACL 187
            F  M    D VSW+ ++ G +     E+  L FR M   +G   D V++ S + A   L
Sbjct: 204 LFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNL 263

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            ++S G ++H L I  G ED  +V   NSLI MYS+C ++ +A +AF  +  K+++SWN 
Sbjct: 264 KDISLGTMVHGLVIFRGLEDDLFVG--NSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNL 321

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  + LN    EA  LL  M +    E D  T+  ++ +    L   + RSVHG  IR+
Sbjct: 322 MLSAYILNESHLEALALLGTM-VREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK 380

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYL 362
               + L++NS++D Y+K N +  A ++F+ +    D+V+W++MI+G  +     E + +
Sbjct: 381 GYESNELLLNSVIDAYAKCNLVELARMVFDGMNK-KDVVAWSTMIAGFARNGKPDEAISV 439

Query: 363 CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
             Q +        +++ ++ +C     L   K  H   ++ G ++      +++ MY  C
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKC 499

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           GD+ A+     +I    +  CW+ +I A   NG   EA+  F+ + +Q    P++VT ++
Sbjct: 500 GDIEASIRAFNQIPQK-NVVCWSAMISAFRINGLAHEALMLFEKI-KQNGTKPNAVTALS 557

Query: 477 VISACGNLELAFEGKSL 493
           ++SAC +  L  EG S 
Sbjct: 558 LLSACSHGGLIEEGLSF 574



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 229/467 (49%), Gaps = 25/467 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVS-YFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A L    SLL+ Y+ V  YF  +  LF E +   DVV+W+ MI   V+      G  
Sbjct: 178 GFSAILSVQNSLLSLYAEVHMYF--AYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFL 235

Query: 60  FFGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F  MV E GI  D  T++ ++ A T +  +  G +VH L I  G+  D  + N  ++MY
Sbjct: 236 MFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMY 295

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KC +++S+   F  +   + +SWN ++S  + N    + L     M   G + D V+L+
Sbjct: 296 SKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLA 355

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + +  +    +    + +H + I+ GYE +    + NS+I  Y++C  +E A   F GM 
Sbjct: 356 NVLQIAKHFLDSLKCRSVHGVIIRKGYESNEL--LLNSVIDAYAKCNLVELARMVFDGMN 413

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVV+W+ +I GFA NGK +EA  +  +M     V P+  +++ L+  CA S  LR+ +
Sbjct: 414 KKDVVAWSTMIAGFARNGKPDEAISVFKQMN--EEVIPNNVSIMNLMEACAVSAELRQSK 471

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
             HG A+RR L  ++ +  S++D YSK   +  +   FN I P  ++V W++MIS     
Sbjct: 472 WAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQI-PQKNVVCWSAMISAFRIN 530

Query: 354 GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIG 405
           GL  E L L  +   +       T L++L +C+    +E G S     + K G       
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEH 590

Query: 406 VNALMHMYINCGDLVAAFSLLQRISH--NSDTSCWNIVIVACTQNGH 450
            + ++ M    G    A  L++++     +  S W  ++ +C   G+
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGN 637



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 156/301 (51%), Gaps = 8/301 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L    SL+  YS      S+   F E   K++++WN M++A + N   +  L  
Sbjct: 279 RGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALAL 338

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            G MV EG   D  TL  ++          + R VH + I+ G  ++  L N  ++ YAK
Sbjct: 339 LGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAK 398

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA--DNVSLS 178
           C  +  +   F GM+  D V+W+T+++G   N  P++ +  F++M    E+   +NVS+ 
Sbjct: 399 CNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM---NEEVIPNNVSIM 455

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A A   EL   K  H + ++ G   +  V++  S+I MYS+CGDIEA+ RAF  + 
Sbjct: 456 NLMEACAVSAELRQSKWAHGIAVRRGL--ASEVAIGTSIIDMYSKCGDIEASIRAFNQIP 513

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K+VV W+A+I  F +NG   EA  L  +++     +P+  T ++L+S C+   L+ EG 
Sbjct: 514 QKNVVCWSAMISAFRINGLAHEALMLFEKIK-QNGTKPNAVTALSLLSACSHGGLIEEGL 572

Query: 299 S 299
           S
Sbjct: 573 S 573


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 182/615 (29%), Positives = 310/615 (50%), Gaps = 37/615 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + +G+ +H      G+E +  V     LI MY+QCG +  A++ F  +  KDV +W  +I
Sbjct: 21  VDHGRRVHWHVCDRGFEQNNLV--CGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMI 78

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +   G ++ A  + ++MQ    V P   T V +++ CA +  L++G  +HG  +++  
Sbjct: 79  GIYCQQGDYDRALGMFYQMQ-EEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGF 137

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
             D+ +  +L++ Y+K  S+  A   F  +    D+VSW +MI+   +   +  +++ + 
Sbjct: 138 EGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYR 196

Query: 370 ------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       TL  +  +   P  L  GK I+         ++   +N+ M+M+ N G
Sbjct: 197 RMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAG 256

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A  L + +  + D   WNIVI    QN +F EA++ F  + QQ     + +T V +
Sbjct: 257 LLGDARRLFEDMV-DRDVVTWNIVITFYVQNENFGEAVRLFGRL-QQDGIKANDITFVLM 314

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++   +L    +GK +H L  ++    D  V  AL+++YGRC     A  +F    + ++
Sbjct: 315 LNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDV 374

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            TW  M  A++QN     AL+LF+ ++ E   P   ++V++L  C  L  L+ G+QIH H
Sbjct: 375 ITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSH 434

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEA 639
           +   GF+    + +AL++MY  C   A                W+SM+ AY  HG   E 
Sbjct: 435 IIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDET 494

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++LF++M   G +    S +S+LSA SHSG V +G QY+  ML+++ + P  E + C+VD
Sbjct: 495 LQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 554

Query: 700 MLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           +LGR+G++QEA + +  L    P   +W  +L AC  H  T   K  AE + + +P + G
Sbjct: 555 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 614

Query: 759 YYISLSNMYVALGRW 773
            Y+ LSN+Y A G W
Sbjct: 615 AYVVLSNVYAAAGDW 629



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 239/493 (48%), Gaps = 35/493 (7%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +PD A  V L+  C+ +  +  GR VH +   R    + L+   L+  Y++  S+ +A+ 
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 335 LFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  I    D+ +W  MI             G+F +M       +  T +AIL +C S E
Sbjct: 62  VFE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           SL+ G  IH   L+ GF  +     AL++MY  CG +  A+   +R+ H  D   W  +I
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 179

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
            AC Q+  F  A   ++ M Q     P+ +TL  V +A G+     EGK ++ L    +M
Sbjct: 180 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D RV N+ + M+G    +  A  +FE   + ++ TWN +I+ + QN+    A+ LF  
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           L+    + N+I+ V +L+  T L  L  GK IH  V   G+  +  +++AL+ +Y  C  
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K    W+ M  AY  +G   EA++LF EM   G RPT ++++++L  
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C+H   + +G Q +++++E    R E      +++M G+ GK+ EA    + +  +    
Sbjct: 419 CAHLAALQKGRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDIL 476

Query: 725 VWGAMLSACSHHG 737
           VW +ML A + HG
Sbjct: 477 VWNSMLGAYAQHG 489



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 165/630 (26%), Positives = 288/630 (45%), Gaps = 42/630 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+   + ++   +    +  GR VH      G   ++ +C   + MYA+CG +  ++  F
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 132 SGMHCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             +   D  +W T M G  C   +Y ++ L  F +M         V+  + + A A    
Sbjct: 64  EILERKDVFAW-TRMIGIYCQQGDY-DRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  IH   ++ G+E   +V    +LI+MY++CG +  A  +F  +  +DVVSW A+I
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                + +F  A  L   MQL   V P+  T+ T+ +   D   L EG+ ++     R++
Sbjct: 180 AACVQHDQFALARWLYRRMQL-DGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS 364
             D+ +MNS M+ +  +  L  A  LF  +    D+V+WN +I+       F E + L  
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVD-RDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           T + +L    S  SL  GK IH    + G+  + +   ALM +Y  C 
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               A+ +   +  + D   W ++ VA  QNG  +EA++ F+ M Q +   P S TLV V
Sbjct: 358 APGQAWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEM-QLEGRRPTSATLVAV 415

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C +L    +G+ +H   +++   ++  V+ ALI MYG+C  +  A +VFE     ++
Sbjct: 416 LDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDI 475

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
             WN M+ A++Q+      L+LF  ++ +    + +S VS+LSA +  G +  G Q    
Sbjct: 476 LVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQY--- 532

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                     F+  A+L  +S   +   +  ++   G  G+  EA+++  ++  SG  P 
Sbjct: 533 ----------FV--AMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKL--SGCLPD 578

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
               ++LL AC      D+       +LE 
Sbjct: 579 GILWMTLLGACRTHNKTDQAKAAAEQVLER 608



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 256/593 (43%), Gaps = 22/593 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  +      L+  Y+       +  +F     KDV  W  MI    +       L  
Sbjct: 34  RGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGM 93

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M EE +     T + I++A      LK G  +H   ++ G   D  +    +NMY K
Sbjct: 94  FYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNK 153

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  +  +F  +   D VSW  +++ C+ ++        +R M   G   + ++L + 
Sbjct: 154 CGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 213

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A      LS GK I++L      E    V V NS ++M+   G +  A R F  M  +
Sbjct: 214 FNAYGDPHYLSEGKFIYSLVSSRVMESD--VRVMNSAMNMFGNAGLLGDARRLFEDMVDR 271

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV+WN +I  +  N  F EA  L   +Q    ++ +  T V ++++      L +G+ +
Sbjct: 272 DVVTWNIVITFYVQNENFGEAVRLFGRLQ-QDGIKANDITFVLMLNVYTSLTSLAKGKVI 330

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL 355
           H          D+++  +LM  Y +  +  +A  +F  +    D+++W  M      +G 
Sbjct: 331 HELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGS-KDVITWTVMCVAYAQNGF 389

Query: 356 FKEMLYLCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            KE L L  +          +TL+A+L +C    +L+ G+ IH   ++ GF    +   A
Sbjct: 390 RKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETA 449

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG +  A S+ ++++   D   WN ++ A  Q+G++ E ++ F  M Q     
Sbjct: 450 LINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQM-QLDGEK 507

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT-RVQNALITMYGRCRDIKSAST 527
            D+V+ V+V+SA  +     +G       L+      T  +   ++ + GR   I+ A  
Sbjct: 508 ADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVD 567

Query: 528 VFESCYNC--NLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
           +      C  +   W  ++ A  + NK +       + LE +P+      +LS
Sbjct: 568 IVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLS 620



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/499 (25%), Positives = 229/499 (45%), Gaps = 21/499 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   +   T+L+  Y+       +   F    ++DVV+W AMI ACV++    +    
Sbjct: 135 QGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWL 194

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M  +G+  +  TL  + +A    + L +G+ ++ L     M +D  + N  +NM+  
Sbjct: 195 YRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGN 254

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSS 179
            G L  +   F  M   D V+WN +++  + N N+ E   L+ R +   G +A++++   
Sbjct: 255 AGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR-LQQDGIKANDITFVL 313

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +     L  L+ GKVIH L  + GY+    V V  +L+S+Y +C     A + F  M  
Sbjct: 314 MLNVYTSLTSLAKGKVIHELVKEAGYDRD--VVVATALMSLYGRCEAPGQAWKIFVDMGS 371

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV++W  +   +A NG  +EA  L  EMQL     P  AT+V ++  CA    L++GR 
Sbjct: 372 KDVITWTVMCVAYAQNGFRKEALQLFQEMQL-EGRRPTSATLVAVLDTCAHLAALQKGRQ 430

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
           +H + I      ++++  +L++ Y K   +++A  +F  +A   D++ WNSM+      G
Sbjct: 431 IHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAK-RDILVWNSMLGAYAQHG 489

Query: 355 LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGV 406
            + E L L +Q           + +++L + +   S+  G       L+    +      
Sbjct: 490 YYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELY 549

Query: 407 NALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQQ 464
             ++ +    G +  A  ++ ++S    D   W  ++ AC T N   Q      + + + 
Sbjct: 550 GCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERD 609

Query: 465 QNASPDSVTLVNVISACGN 483
            + S   V L NV +A G+
Sbjct: 610 PSHSGAYVVLSNVYAAAGD 628



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 23/197 (11%)

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           F+P+    V++L  C+    + HG+++H HV   GF++N+ +   L+ MY+ C       
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K   AW+ MI  Y   G    A+ +F++M    + PTK + +++L+AC+ + 
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 670 LVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
            + +G++ +  +L+   E DV   T     +++M  + G ++ A++  K L  +     W
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGT----ALINMYNKCGSVRGAWDSFKRLEHRDVVS-W 175

Query: 727 GAMLSACSHHGDTKMGK 743
            AM++AC  H    + +
Sbjct: 176 TAMIAACVQHDQFALAR 192


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 198/670 (29%), Positives = 324/670 (48%), Gaps = 40/670 (5%)

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           T S+N+++S   +     + L  +  M  +  Q D  +  S   A   L   S+G  +H 
Sbjct: 14  TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +  G     Y+   +SLIS Y++ G I    + F  M  ++VV W  II  ++  G  
Sbjct: 74  SVVVNGLSHDSYIG--SSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDI 131

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           + AF +  +M+    ++P   T VTL+SL      L     +H   I      DL + NS
Sbjct: 132 DIAFSMFKQMR-ESGIQP---TSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNS 187

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF----- 368
           +++ Y K   ++ A  LF +I    D+VSWNS++S     G  +E+L L           
Sbjct: 188 MVNMYGKCGRIADARRLFQSI-DCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKP 246

Query: 369 --STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T  + L +      L  GK +H   LK G + +    +AL+ +Y+ C  L  A+ + 
Sbjct: 247 DKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVF 306

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           +  +   D   W  +I    QN    +A+  F  M +  N  P + TL + ++AC  L  
Sbjct: 307 KSTTEK-DVVMWTAMISGLVQNDCADKALGVFYQMIES-NVKPSTATLASGLAACAQLGC 364

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              G S+HG  L+  + LD   QN+L+TMY +C  ++ + ++F      +L +WN +++ 
Sbjct: 365 CDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAG 424

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            ++N    + +  F  +      P+ I++ S+L AC   G L  GK IH  V        
Sbjct: 425 HAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPC 484

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
               +AL+DMY  C               +   AWS++I  YG++GKG  A+  + E   
Sbjct: 485 IMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLG 544

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +G+ P     IS+LSACSH GL+ +GL  Y +M +++ + P  EH  C+VD+L R+GK+ 
Sbjct: 545 TGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVD 604

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EAY F K +  +P   V G +L AC  +G  ++GK +A  +F+L+P + G ++ L+N Y 
Sbjct: 605 EAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYA 664

Query: 769 ALGRWKDAVE 778
           ++ RW D VE
Sbjct: 665 SMSRW-DGVE 673



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 181/698 (25%), Positives = 318/698 (45%), Gaps = 48/698 (6%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  +  M +   + D+ T   +  A T +N    G  +H   +  G+  DS + +  ++ 
Sbjct: 34  LQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISF 93

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK G ++     F  M   + V W TI+         +     F++M  SG Q  +V+L
Sbjct: 94  YAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTL 153

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +     + +L     +H L I  G+E    ++++NS+++MY +CG I  A R F  +
Sbjct: 154 LSLLPG---ISKLPLLLCLHCLIILHGFESD--LALSNSMVNMYGKCGRIADARRLFQSI 208

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            C+D+VSWN+++  ++  G  EE   LL  M++   ++PD  T  + +S  A    LR G
Sbjct: 209 DCRDIVSWNSLLSAYSKIGATEEILQLLQAMKI-EDIKPDKQTFCSALSASAIKGDLRLG 267

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + VHG  ++  L  D  + ++L+  Y +   L  A  +F +     D+V W +MISGL  
Sbjct: 268 KLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE-KDVVMWTAMISGLVQ 326

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F +M+    + S +TL + L +C      + G SIH + L+ G   +   
Sbjct: 327 NDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPA 386

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N+L+ MY  C  L  + S+  ++    D   WN ++    +NG+  + I  F  M ++ 
Sbjct: 387 QNSLVTMYAKCNKLQQSCSIFNKMVEK-DLVSWNAIVAGHAKNGYLSKGIFFFNEM-RKS 444

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PDS+T+ +++ ACG+     +GK +H   L+S +      + AL+ MY +C ++++A
Sbjct: 445 FLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENA 504

Query: 526 STVFESCYNCNLCTWNCMISAFSQN-KAEV--RALELFRHLEFEPNEISIVSILSACTQL 582
              F+     +L  W+ +I  +  N K E+  R    F     EPN +  +S+LSAC+  
Sbjct: 505 QKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHG 564

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G  I+  +            +    M  N +  A    ++S     GK  EA   
Sbjct: 565 GLISKGLSIYESM------------TKDFRMSPNLEHRACVVDLLSR---AGKVDEAYSF 609

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC-IVDML 701
           +  M      P+   +  LL AC  +G V+ G     +M E   V P     +      +
Sbjct: 610 YKMMFK---EPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASM 666

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            R   +++A+  +++L ++  PG W    S+   HG T
Sbjct: 667 SRWDGVEKAWTQMRSLGLKKYPG-W----SSIEVHGTT 699



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 175/653 (26%), Positives = 296/653 (45%), Gaps = 66/653 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL++ Y+          +F     ++VV W  +I +      + +    F +M E GI+
Sbjct: 88  SSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQ 147

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             S TLL ++  +++   L     +HCL I  G  +D +L N  VNMY KCG +  +   
Sbjct: 148 PTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRL 204

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  + C D VSWN+++S        E+ L   + M     + D  +  SA++ASA  G+L
Sbjct: 205 FQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDL 264

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK++H L +K G     +V   ++L+ +Y +C  ++ A + F   T KDVV W A+I 
Sbjct: 265 RLGKLVHGLMLKDGLNIDQHVE--SALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMIS 322

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G   N   ++A  + ++M +  +V+P  AT+ + ++ CA       G S+HGY +R+ + 
Sbjct: 323 GLVQNDCADKALGVFYQM-IESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIM 381

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+   NSL+  Y+K N L ++  +FN +    DLVSWN++++G             F E
Sbjct: 382 LDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE-KDLVSWNAIVAGHAKNGYLSKGIFFFNE 440

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T+ ++L +C S  +L  GK IH + L+       +   AL+ MY  CG+
Sbjct: 441 MRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGN 500

Query: 419 LVAAFS----LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           L  A      +LQR     D   W+ +IV    NG  + A++ +          P+ V  
Sbjct: 501 LENAQKCFDCMLQR-----DLVAWSTLIVGYGFNGKGEIALRKYSEFL-GTGMEPNHVIF 554

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           ++V+SAC +  L  +     GL++   M  D R+                          
Sbjct: 555 ISVLSACSHGGLISK-----GLSIYESMTKDFRMSP------------------------ 585

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            NL    C++   S+      A   ++ +  EP+ + +  +L AC   G +  GK I   
Sbjct: 586 -NLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARD 644

Query: 595 VFHLG-FQENSFISSALLDMYSNCKS----NAAWSSMISAYGYHGKGWEAIEL 642
           +F L      +F+   L + Y++         AW+ M S       GW +IE+
Sbjct: 645 MFELKPVDPGNFVQ--LANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEV 695



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 221/490 (45%), Gaps = 20/490 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  S S++  Y        +  LF     +D+V+WN++++A  +       L   
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E I+ D  T    +SA      L+ G++VH L +K G+  D  + +  V +Y +C
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L+ +   F      D V W  ++SG + N+  +K L  F +M  S  +    +L+S +
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 182 AASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           AA A LG    G  IH   ++ G   D P     NSL++MY++C  ++ +   F  M  K
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIP---AQNSLVTMYAKCNKLQQSCSIFNKMVEK 413

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWNAI+ G A NG   +     +EM+    + PD  TV +L+  C  +  L +G+ +
Sbjct: 414 DLVSWNAIVAGHAKNGYLSKGIFFFNEMR-KSFLRPDSITVTSLLQACGSAGALCQGKWI 472

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H + +R  L   ++   +L+D Y K  +L  A+  F+ +    DLV+W+++I G      
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCML-QRDLVAWSTLIVGYGFNGK 531

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVN 407
                  + E L    + +    +++L +C+    +  G SI+    K    S N     
Sbjct: 532 GEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRA 591

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            ++ +    G +  A+S  + +          +++ AC  NG  +      + M + +  
Sbjct: 592 CVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPV 651

Query: 468 SPDS-VTLVN 476
            P + V L N
Sbjct: 652 DPGNFVQLAN 661



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 141/278 (50%), Gaps = 4/278 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G +  +P   SL+T Y+  +  + S ++F +   KD+V+WNA++    +N  +  G+ F
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFF 437

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM +  +R DS T+  ++ A      L QG+ +H   +++ +I         V+MY K
Sbjct: 438 FNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFK 497

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L +++  F  M   D V+W+T++ G   N   E  L  + E   +G + ++V   S 
Sbjct: 498 CGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISV 557

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G +S G  I+    K  +  SP +     ++ + S+ G ++ A  +F+ M  K
Sbjct: 558 LSACSHGGLISKGLSIYESMTK-DFRMSPNLEHRACVVDLLSRAGKVDEA-YSFYKMMFK 615

Query: 241 D--VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           +  +V    ++D   +NG+ E    +  +M  ++ V+P
Sbjct: 616 EPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDP 653


>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
 gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
          Length = 682

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 344/698 (49%), Gaps = 55/698 (7%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           M+ KCGD+  +   F G+   +  SW  I++ C  N    + LL  R M   G + D V 
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             + +   A   +L  GKV HA  +  G E S  V + N+LI+MY +C +++ A   F  
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRV-LGNALINMYGKCRNLDLARAQFDR 119

Query: 237 MT----CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           M      +DVV+WN+++  F  NG  EEA  L  EM++   ++P   T+  ++  C+   
Sbjct: 120 MEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEV-EGIKPSSVTLTCVLESCSGD- 177

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             R+G+  H   +   L  D  +MNSL+  Y++   L ++ L+F AI    D++SWN MI
Sbjct: 178 --RQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAI-DQKDIISWNVMI 234

Query: 353 S-----GLFKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           S     G  +E + L  +            T ++++ +C+    L+   +I       GF
Sbjct: 235 SLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGF 294

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            ++ +  NA+++M+   G L AA +   R+   +  S WN +I    QN   +  ++ F+
Sbjct: 295 DDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVS-WNCLISGYAQNLQGRRCLELFR 353

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  Q+    +SVT V+++ AC  +     G+ LH     + + L T V  ALI MYG+C
Sbjct: 354 QM-DQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKC 412

Query: 520 RDIKSASTVFESCYNCNL---CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIV 573
           ++++ A  + E   +  L    TWN + +A++QN   + ALELF  ++       E + V
Sbjct: 413 QELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFV 472

Query: 574 SILSAC-TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
           +IL AC     +L HG+ I      L    +  I  ALL MYS C               
Sbjct: 473 TILDACGDSSSLLAHGRSIA----KLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSS 528

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           +   AW+SM++AY + G+  EA+ +  +M + G+ P   +  +++ ACSH+GL+ E L  
Sbjct: 529 RGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVR 588

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
              +  +Y        + C+VD+L R G+LQEA E +  +P +P    W A+L AC+ HG
Sbjct: 589 LAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHG 648

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           D + G + A     L+  + G Y+ LSNMY +   W+D
Sbjct: 649 DLERGARTAGHEALLDSGS-GRYVLLSNMYAS---WED 682



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 185/680 (27%), Positives = 324/680 (47%), Gaps = 62/680 (9%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            E +  +F+     ++ +W  ++ AC  N   +  L     M+ EG R D    + I+  
Sbjct: 8   IEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVTILDL 67

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGM----HCA 137
                 L+QG+V H   +  G+ + S  L N  +NMY KC +L+ +   F  M    H  
Sbjct: 68  CAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDHGR 127

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D V+WN++++   HN Y E+    F+EM   G +  +V+L+  +   +C G+   GK+ H
Sbjct: 128 DVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVL--ESCSGD-RQGKLFH 184

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + LG +   ++   NSL+ MY++CG +E +   F  +  KD++SWN +I   A  G 
Sbjct: 185 DRVLDLGLQGDEFL--MNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGS 242

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL---GY--D 312
            EEA +LL E+ L    EPD  T ++++  C  S L   G     + I+ L+   G+  D
Sbjct: 243 SEEAVELLREIDLEGFPEPDEVTFISVVDAC--SCL---GDLDLCFTIQELVSSAGFDDD 297

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           LL+ N++++ + KS  L  A   F+ + P+ ++VSWN +ISG            LF++M 
Sbjct: 298 LLLGNAVVNMFGKSGCLDAARATFDRL-PVKNVVSWNCLISGYAQNLQGRRCLELFRQMD 356

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               + +  T +++L +C++  +L+FG+ +H      G   +T+   AL++MY  C +L 
Sbjct: 357 QEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQ 416

Query: 421 AAFSLLQRISHNS--DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
            A  LL+R       D+  WN +  A  QNGH  EA++ F  M QQQ       T V ++
Sbjct: 417 LAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRM-QQQGVRAQEATFVTIL 475

Query: 479 SACGN-LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
            ACG+   L   G+S+  L+  +       ++ AL+ MY +C  +  A    +S  +  L
Sbjct: 476 DACGDSSSLLAHGRSIAKLSSWT----SDAIKGALLGMYSKCGCVDDALAALQSLSSRGL 531

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
             W  M++A++       AL +   ++ +   P++++  +++ AC+  G+L         
Sbjct: 532 LAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLL--------- 582

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
             H      +++S      Y        +  ++      G+  EA EL H M      P 
Sbjct: 583 --HEALVRLAWVSGD----YGTAMGAGLYECVVDVLARMGRLQEAEELMHAM---PYEPD 633

Query: 655 KSSVISLLSACSHSGLVDEG 674
             + ++LL AC+  G ++ G
Sbjct: 634 SLAWMALLGACTVHGDLERG 653



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 206/467 (44%), Gaps = 32/467 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-R 70
           SL+  Y+     E S  +F     KD+++WN MI+           +    E+  EG   
Sbjct: 201 SLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPE 260

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T + +V A + +  L     +  L   AG   D  L N  VNM+ K G L+++  T
Sbjct: 261 PDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARAT 320

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSWN ++SG   N    +CL  FR+M   G +A++V+  S + A + +  L
Sbjct: 321 FDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPAL 380

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE---RAFWGMTCKDVVSWNA 247
            +G+ +H      G E   +  V  +LI+MY +C +++ A+     +     +D V+WNA
Sbjct: 381 DFGRELHLRITAAGLE--LHTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNA 438

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           I   +A NG   EA +L   MQ  + V    AT VT++  C DS  L      HG +I +
Sbjct: 439 IAAAYAQNGHPLEALELFWRMQ-QQGVRAQEATFVTILDACGDSSSLL----AHGRSIAK 493

Query: 308 LLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLY 361
           L  +    +  +L+  YSK   +  A     +++    L++W SM++     G   E L 
Sbjct: 494 LSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRG-LLAWTSMLAAYAHVGRASEALR 552

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKS----IHCWQLKLGFSNNTIGVNALMHMY---- 413
           +  Q        ++P   +  ++ F  S    +H   ++L + +   G      +Y    
Sbjct: 553 VLGQMQHD---GVVPDDVAFSAVVFACSHAGLLHEALVRLAWVSGDYGTAMGAGLYECVV 609

Query: 414 ---INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
                 G L  A  L+  + +  D+  W  ++ ACT +G  +   +T
Sbjct: 610 DVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDLERGART 656



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 172/367 (46%), Gaps = 34/367 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L    +++  +      +++ A F     K+VV+WN +I+   +N      L  F
Sbjct: 293 GFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELF 352

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +EG++ +S T + ++ A + +  L  GR +H     AG+   + +    +NMY KC
Sbjct: 353 RQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKC 412

Query: 122 GDLNSSE---CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF---REMGWSGEQADNV 175
            +L  ++     +      D+V+WN I +    N +P + L  F   ++ G   ++A  V
Sbjct: 413 QELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFV 472

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGDIEAAERA 233
           ++  A   S+ L  L++G+ I  L        S + S  +  +L+ MYS+CG ++ A  A
Sbjct: 473 TILDACGDSSSL--LAHGRSIAKL--------SSWTSDAIKGALLGMYSKCGCVDDALAA 522

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
              ++ + +++W +++  +A  G+  EA  +L +MQ    V PD      ++  C+ + L
Sbjct: 523 LQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQ-HDGVVPDDVAFSAVVFACSHAGL 581

Query: 294 LREGRSVHGYAIRRLL----GYDLLMMNSL----MDFYSKSNSLSKAELLFNAIAPMNDL 345
           L E       A+ RL      Y   M   L    +D  ++   L +AE L +A+    D 
Sbjct: 582 LHE-------ALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDS 634

Query: 346 VSWNSMI 352
           ++W +++
Sbjct: 635 LAWMALL 641


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 198/670 (29%), Positives = 324/670 (48%), Gaps = 40/670 (5%)

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           T S+N+++S   +     + L  +  M  +  Q D  +  S   A   L   S+G  +H 
Sbjct: 14  TKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQ 73

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +  G     Y+   +SLIS Y++ G I    + F  M  ++VV W  II  ++  G  
Sbjct: 74  SVVVNGLSHDSYIG--SSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDI 131

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           + AF +  +M+    ++P   T VTL+SL      L     +H   I      DL + NS
Sbjct: 132 DIAFSMFKQMR-ESGIQP---TSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNS 187

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF----- 368
           +++ Y K   ++ A  LF +I    D+VSWNS++S     G  +E+L L           
Sbjct: 188 MVNMYGKCGRIADARRLFESIG-CRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKP 246

Query: 369 --STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T  + L +      L  GK +H   LK G + +    +AL+ +Y+ C  L  A+ + 
Sbjct: 247 DKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVF 306

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           +  +   D   W  +I    QN    +A+  F  M +  N  P + TL + ++AC  L  
Sbjct: 307 KSTTEK-DVVMWTAMISGLVQNDCADKALGVFYQMIES-NVKPSTATLASGLAACAQLGC 364

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              G S+HG  L+  + LD   QN+L+TMY +C  ++ + ++F      +L +WN +++ 
Sbjct: 365 CDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAG 424

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            ++N    + +  F  +      P+ I++ S+L AC   G L  GK IH  V        
Sbjct: 425 HAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPC 484

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
               +AL+DMY  C               +   AWS++I  YG++GKG  A+  + E   
Sbjct: 485 IMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLG 544

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           +G+ P     IS+LSACSH GL+ +GL  Y +M +++ + P  EH  C+VD+L R+GK+ 
Sbjct: 545 TGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVD 604

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EAY F K +  +P   V G +L AC  +G  ++GK +A  +F+L+P + G ++ L+N Y 
Sbjct: 605 EAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYA 664

Query: 769 ALGRWKDAVE 778
           ++ RW D VE
Sbjct: 665 SMSRW-DGVE 673



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 181/698 (25%), Positives = 318/698 (45%), Gaps = 48/698 (6%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  +  M +   + D+ T   +  A T +N    G  +H   +  G+  DS + +  ++ 
Sbjct: 34  LQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISF 93

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK G ++     F  M   + V W TI+         +     F++M  SG Q  +V+L
Sbjct: 94  YAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTL 153

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +     + +L     +H L I  G+E    ++++NS+++MY +CG I  A R F  +
Sbjct: 154 LSLLPG---ISKLPLLLCLHCLIILHGFESD--LALSNSMVNMYGKCGRIADARRLFESI 208

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            C+D+VSWN+++  ++  G  EE   LL  M++   ++PD  T  + +S  A    LR G
Sbjct: 209 GCRDIVSWNSLLSAYSKIGATEEILQLLQAMKI-EDIKPDKQTFCSALSASAIKGDLRLG 267

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + VHG  ++  L  D  + ++L+  Y +   L  A  +F +     D+V W +MISGL  
Sbjct: 268 KLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE-KDVVMWTAMISGLVQ 326

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F +M+    + S +TL + L +C      + G SIH + L+ G   +   
Sbjct: 327 NDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPA 386

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N+L+ MY  C  L  + S+  ++    D   WN ++    +NG+  + I  F  M ++ 
Sbjct: 387 QNSLVTMYAKCNKLQQSCSIFNKMVEK-DLVSWNAIVAGHAKNGYLSKGIFFFNEM-RKS 444

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              PDS+T+ +++ ACG+     +GK +H   L+S +      + AL+ MY +C ++++A
Sbjct: 445 FLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENA 504

Query: 526 STVFESCYNCNLCTWNCMISAFSQN-KAEV--RALELFRHLEFEPNEISIVSILSACTQL 582
              F+     +L  W+ +I  +  N K E+  R    F     EPN +  +S+LSAC+  
Sbjct: 505 QKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHG 564

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G  I+  +            +    M  N +  A    ++S     GK  EA   
Sbjct: 565 GLISKGLSIYESM------------TKDFRMSPNLEHRACVVDLLSR---AGKVDEAYSF 609

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC-IVDML 701
           +  M      P+   +  LL AC  +G V+ G     +M E   V P     +      +
Sbjct: 610 YKMMFK---EPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASM 666

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            R   +++A+  +++L ++  PG W    S+   HG T
Sbjct: 667 SRWDGVEKAWTQMRSLGLKKYPG-W----SSIEVHGTT 699



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 175/653 (26%), Positives = 296/653 (45%), Gaps = 66/653 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL++ Y+          +F     ++VV W  +I +      + +    F +M E GI+
Sbjct: 88  SSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQ 147

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             S TLL ++  +++   L     +HCL I  G  +D +L N  VNMY KCG +  +   
Sbjct: 148 PTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRL 204

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  + C D VSWN+++S        E+ L   + M     + D  +  SA++ASA  G+L
Sbjct: 205 FESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDL 264

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK++H L +K G     +V   ++L+ +Y +C  ++ A + F   T KDVV W A+I 
Sbjct: 265 RLGKLVHGLMLKDGLNIDQHVE--SALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMIS 322

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G   N   ++A  + ++M +  +V+P  AT+ + ++ CA       G S+HGY +R+ + 
Sbjct: 323 GLVQNDCADKALGVFYQM-IESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIM 381

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D+   NSL+  Y+K N L ++  +FN +    DLVSWN++++G             F E
Sbjct: 382 LDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE-KDLVSWNAIVAGHAKNGYLSKGIFFFNE 440

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T+ ++L +C S  +L  GK IH + L+       +   AL+ MY  CG+
Sbjct: 441 MRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGN 500

Query: 419 LVAAFS----LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
           L  A      +LQR     D   W+ +IV    NG  + A++ +          P+ V  
Sbjct: 501 LENAQKCFDCMLQR-----DLVAWSTLIVGYGFNGKGEIALRKYSEFL-GTGMEPNHVIF 554

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           ++V+SAC +  L  +     GL++   M  D R+                          
Sbjct: 555 ISVLSACSHGGLISK-----GLSIYESMTKDFRMSP------------------------ 585

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            NL    C++   S+      A   ++ +  EP+ + +  +L AC   G +  GK I   
Sbjct: 586 -NLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARD 644

Query: 595 VFHLG-FQENSFISSALLDMYSNCKS----NAAWSSMISAYGYHGKGWEAIEL 642
           +F L      +F+   L + Y++         AW+ M S       GW +IE+
Sbjct: 645 MFELKPVDPGNFVQ--LANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEV 695



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 221/490 (45%), Gaps = 20/490 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  S S++  Y        +  LF     +D+V+WN++++A  +       L   
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E I+ D  T    +SA      L+ G++VH L +K G+  D  + +  V +Y +C
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L+ +   F      D V W  ++SG + N+  +K L  F +M  S  +    +L+S +
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 182 AASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           AA A LG    G  IH   ++ G   D P     NSL++MY++C  ++ +   F  M  K
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIP---AQNSLVTMYAKCNKLQQSCSIFNKMVEK 413

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWNAI+ G A NG   +     +EM+    + PD  TV +L+  C  +  L +G+ +
Sbjct: 414 DLVSWNAIVAGHAKNGYLSKGIFFFNEMR-KSFLRPDSITVTSLLQACGSAGALCQGKWI 472

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H + +R  L   ++   +L+D Y K  +L  A+  F+ +    DLV+W+++I G      
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCML-QRDLVAWSTLIVGYGFNGK 531

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVN 407
                  + E L    + +    +++L +C+    +  G SI+    K    S N     
Sbjct: 532 GEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRA 591

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            ++ +    G +  A+S  + +          +++ AC  NG  +      + M + +  
Sbjct: 592 CVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPV 651

Query: 468 SPDS-VTLVN 476
            P + V L N
Sbjct: 652 DPGNFVQLAN 661



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 141/278 (50%), Gaps = 4/278 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G +  +P   SL+T Y+  +  + S ++F +   KD+V+WNA++    +N  +  G+ F
Sbjct: 378 QGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFF 437

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM +  +R DS T+  ++ A      L QG+ +H   +++ +I         V+MY K
Sbjct: 438 FNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFK 497

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L +++  F  M   D V+W+T++ G   N   E  L  + E   +G + ++V   S 
Sbjct: 498 CGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISV 557

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G +S G  I+    K  +  SP +     ++ + S+ G ++ A  +F+ M  K
Sbjct: 558 LSACSHGGLISKGLSIYESMTK-DFRMSPNLEHRACVVDLLSRAGKVDEA-YSFYKMMFK 615

Query: 241 D--VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           +  +V    ++D   +NG+ E    +  +M  ++ V+P
Sbjct: 616 EPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDP 653


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 202/659 (30%), Positives = 330/659 (50%), Gaps = 51/659 (7%)

Query: 160 LYFREMGWSGEQADNVSLSS---AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           LYFR    S  +A   SL +   A A+ A L EL +G+++ A    LG +      +   
Sbjct: 4   LYFRPNTTSRARACRDSLLAHLDACASRANLAEL-HGRLVRA---HLGSDPCVAGRLVTL 59

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L S  S+  D+  A + F  M     + WN +I G+       +A +L   M+    V P
Sbjct: 60  LASPVSR-HDMPYARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMR-RSGVSP 117

Query: 277 D---IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           D   +A V    +  A       G +VH    R     DL +M+ L++FY  S S+  A 
Sbjct: 118 DNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDAR 177

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F  +    D+VSW  MIS                EM    ++ +  T++++L +C   
Sbjct: 178 KVFEEMHE-RDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQV 236

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +++ G  ++    + G   +    NAL+ MY+ CG +  A+   + +    +T  WN +
Sbjct: 237 RAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIR-NTKSWNTL 295

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    QNG  +EA+  F+ M       PD +TLV+V+S    L    +G+ LH       
Sbjct: 296 IDGFVQNGKHKEALTMFEEMLSD-GVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHE 354

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  +QN+LI MY +C D+ +A  +FE+    ++ +W  M+  + +      A  LF 
Sbjct: 355 IHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFD 414

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            ++      +E+++VS+LSAC+QLG L  G++IH ++     + + ++ SAL+DMY+ C 
Sbjct: 415 DMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCG 474

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL-- 661
                         K   AW++MI      G+G EA+ LF ++    +R  K   I+L  
Sbjct: 475 CIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLK--LRDPKPDAITLKV 532

Query: 662 -LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
            L AC+H G+VDEGL Y+N ML    + P+ EH+ CIVD+LGR+G L EAY FI+ +PIQ
Sbjct: 533 VLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQ 591

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P P +WG++L+AC  H   ++GK + + +  L P +VG ++ +SN++   G+W D  ++
Sbjct: 592 PNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQV 650



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 261/586 (44%), Gaps = 51/586 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIV---SALTQ 85
           +F        + WN MI         +  L  F  M   G+  D+ T+  +    +A   
Sbjct: 75  VFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFAS 134

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
                 G  VH L  + G  +D  + +  +N Y     +  +   F  MH  D VSW  +
Sbjct: 135 WKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLM 194

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S        +  L    EM   G + + +++ S ++A   +  +  G  ++A   + G 
Sbjct: 195 ISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGI 254

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           E    V + N+LI MY +CG +  A + F GM  ++  SWN +IDGF  NGK +EA  + 
Sbjct: 255 EAD--VDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMF 312

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            EM L   V PD+ T+V+++S  A    L++GR +H Y     +  D+++ NSL++ Y+K
Sbjct: 313 EEM-LSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAK 371

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              ++ AE++F  +A   D+VSW +M+ G            LF +M       S   L++
Sbjct: 372 CGDMAAAEIIFENMA-RRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVS 430

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C+   +L+ G+ IH +  +     +    +AL+ MY  CG + AA  +  R+ H  
Sbjct: 431 LLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            T  WN +I      G  +EA+  F+ + + ++  PD++TL  V+ AC ++ +  EG  L
Sbjct: 491 -TLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEG--L 547

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   L   +G+    ++     YG   D+   + + +  YN                   
Sbjct: 548 HYFNLMLTLGIVPDNEH-----YGCIVDLLGRAGLLDEAYN------------------- 583

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
                  + +  +PN +   S+L+AC     +  GK I  H+  L 
Sbjct: 584 -----FIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLA 624



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 227/457 (49%), Gaps = 17/457 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L   + L+  Y      E +  +F E   +DVV+W  MI+A  +       L   
Sbjct: 152 GFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSL 211

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EG + +  T++ ++SA  Q+  + +G  V+    + G+ AD  + N  + MY KC
Sbjct: 212 DEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKC 271

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +  TF GM   +T SWNT++ G + N   ++ L  F EM   G   D ++L S +
Sbjct: 272 GCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVL 331

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  A LG+L  G+ +H   IK  +E    + + NSLI+MY++CGD+ AAE  F  M  +D
Sbjct: 332 STYAQLGDLQQGRYLHNY-IK-DHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRD 389

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW A++ G+    +F  AF+L  +M++ R V      +V+L+S C+    L +GR +H
Sbjct: 390 IVSWTAMVCGYVKGLQFRTAFNLFDDMKV-RDVMASEMALVSLLSACSQLGALDKGREIH 448

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y   + +  D+ + ++L+D Y+K   +  A  +F+ +     L +WN+MI G       
Sbjct: 449 SYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTL-AWNAMIGGLASQGQG 507

Query: 355 -----LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                LF+++L L      + TL  +L +C     ++ G       L LG   +      
Sbjct: 508 KEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHYGC 567

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           ++ +    G L  A++ +Q++    +   W  ++ AC
Sbjct: 568 IVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAAC 604



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 258/593 (43%), Gaps = 47/593 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           +H   ++A + +D  +    V + A      D+  +   F  M     + WN ++ G   
Sbjct: 37  LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNS 96

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE---LSYGKVIHALGIKLGYEDS 208
            + P   L  FR M  SG   DN ++++   +SA        + G  +HAL  ++G+   
Sbjct: 97  CHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASD 156

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +  V + LI+ Y     +E A + F  M  +DVVSW  +I  FA  G+++     L EM
Sbjct: 157 LF--VMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEM 214

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q     +P+  T+++L+S C     + +G  V+       +  D+ + N+L+  Y K   
Sbjct: 215 Q-SEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGC 273

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +S A   F  + P+ +  SWN++I G            +F+EML         TL+++L 
Sbjct: 274 MSDAWKTFKGM-PIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLS 332

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +      L+ G+ +H +        + I  N+L++MY  CGD+ AA  + + ++   D  
Sbjct: 333 TYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARR-DIV 391

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  ++    +   F+ A   F  M + ++     + LV+++SAC  L    +G+ +H  
Sbjct: 392 SWTAMVCGYVKGLQFRTAFNLFDDM-KVRDVMASEMALVSLLSACSQLGALDKGREIHSY 450

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +  +  D  +++AL+ MY +C  I +A+ +F    +     WN MI   +       A
Sbjct: 451 IKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEA 510

Query: 557 LELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           + LF  L    + +P+ I++  +L ACT +G++  G      +  LG             
Sbjct: 511 VALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGI------------ 558

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                  N  +  ++   G  G   EA     +M    I+P      SLL+AC
Sbjct: 559 ----VPDNEHYGCIVDLLGRAGLLDEAYNFIQKM---PIQPNPVIWGSLLAAC 604


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 180/586 (30%), Positives = 311/586 (53%), Gaps = 40/586 (6%)

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           +E AER F+GM  K+ VSWNA+++G+A  G  ++   L  +M+   +      T+ T++ 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKF-TLSTVLK 59

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            CA++  LREG+ +H  A+R     D  +  SL+D YSK  ++  A  +F  I    D+V
Sbjct: 60  GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN-PDVV 118

Query: 347 SWNSMISGLFK--------EMLYLC-------SQFSFSTLLAILPSCNSPESLEFGKSIH 391
           +W++MI+GL +        E+ +L        +QF+ S+L++   +  +   L +G+SIH
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVS---TATNMGDLRYGQSIH 175

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
               K GF ++ +  N L+ MY+    +     + + ++ N D   WN ++     +   
Sbjct: 176 GCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALLSGFYDSQTC 234

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
               + F  M  +    P+  T ++V+ +C +L     GK +H   +K+    D  V  A
Sbjct: 235 GRGPRIFYQMLLE-GFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA 293

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PN 568
           L+ MY + R ++ A   F+   N ++ +W  +IS ++Q     +A++ FR ++ E   PN
Sbjct: 294 LVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPN 353

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
           E ++ S LS C+ +  L +G+Q+H      G   + F+ SAL+D+Y  C           
Sbjct: 354 EYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               +   +W+++IS Y  HG+G +A+E F  M + GI P +++ I +LSACS  GLV+E
Sbjct: 414 GLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G + +++M + Y + P  EH+ C+VD+LGR+GK  E   FI+ + + P   +W  +L AC
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             HG+   G++ A+ LF++EP     YI LSN++ + GRW D   I
Sbjct: 534 KLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNI 579



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 164/572 (28%), Positives = 280/572 (48%), Gaps = 39/572 (6%)

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +E  F GM   + VSWN +++G       +K L  F +M     +    +LS+ +   A 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G L  GKV+HAL ++ G E   ++    SL+ MYS+CG +  A + F  +   DVV+W+
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGC--SLVDMYSKCGTVYDALKVFTKIRNPDVVAWS 121

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G    G  +EA +L H M+  +   P+  T+ +L+S   +   LR G+S+HG   +
Sbjct: 122 AMITGLDQQGHGQEAAELFHLMR-RKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                D L+ N L+  Y KS  +     +F A+    DLVSWN+++SG            
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN-PDLVSWNALLSGFYDSQTCGRGPR 239

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +F +ML    + +  T +++L SC+S    EFGK +H   +K    ++     AL+ MY 
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
               L  A     R+  N D   W ++I    Q    ++A+K F+ M Q++   P+  TL
Sbjct: 300 KARCLEDAGVAFDRLV-NRDIFSWTVIISGYAQTDQAEKAVKYFRQM-QREGIKPNEYTL 357

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
            + +S C ++     G+ LH +A+K+    D  V +AL+ +YG+C  ++ A  +F+   +
Sbjct: 358 ASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLIS 417

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            ++ +WN +IS +SQ+    +ALE FR +  E   P+E + + +LSAC+ +G++  GK+ 
Sbjct: 418 RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKR 477

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                            ++  +Y    S   ++ M+   G  GK +  +++F E  N  +
Sbjct: 478 F---------------DSMSKIYGINPSIEHYACMVDILGRAGK-FNEVKIFIEEMN--L 519

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            P      ++L AC   G VD G +    + E
Sbjct: 520 TPYSLIWETVLGACKLHGNVDFGEKAAKKLFE 551



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 249/504 (49%), Gaps = 21/504 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF+    K+ V+WNA++    +       L  F +M E   +F   TL  ++        
Sbjct: 7   LFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGS 66

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L++G+V+H L++++G   D  L    V+MY+KCG +  +   F+ +   D V+W+ +++G
Sbjct: 67  LREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITG 126

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                + ++    F  M   G + +  +LSS V+ +  +G+L YG+ IH    K G+E  
Sbjct: 127 LDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESD 186

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             VS  N LI MY +   +E   + F  MT  D+VSWNA++ GF  +        + ++M
Sbjct: 187 NLVS--NPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L+   +P++ T ++++  C+  L    G+ VH + I+     D  +  +L+D Y+K+  
Sbjct: 245 -LLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A + F+ +    D+ SW  +ISG             F++M     + +  TL + L 
Sbjct: 304 LEDAGVAFDRLVN-RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            C+   +LE G+ +H   +K G   +    +AL+ +Y  CG +  A ++ + +  + D  
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI-SRDIV 421

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I   +Q+G  ++A++ F+ M   +   PD  T + V+SAC  + L  EGK     
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMML-SEGIMPDEATFIGVLSACSFMGLVEEGKKRFD- 479

Query: 497 ALKSLMGLDTRVQN--ALITMYGR 518
           ++  + G++  +++   ++ + GR
Sbjct: 480 SMSKIYGINPSIEHYACMVDILGR 503



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 216/488 (44%), Gaps = 29/488 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  YS       +L +F +  N DVV W+AMIT   +          F  M  +G R 
Sbjct: 91  SLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARP 150

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TL  +VS  T M  L+ G+ +H    K G  +D+ + N  + MY K   +      F
Sbjct: 151 NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVF 210

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D VSWN ++SG   +    +    F +M   G + +  +  S + + + L +  
Sbjct: 211 EAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPE 270

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +HA  IK   +D  +V    +L+ MY++   +E A  AF  +  +D+ SW  II G
Sbjct: 271 FGKQVHAHIIKNSSDDDDFVGT--ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISG 328

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A   + E+A     +MQ    ++P+  T+ + +S C+    L  GR +H  A++     
Sbjct: 329 YAQTDQAEKAVKYFRQMQ-REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFG 387

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ + ++L+D Y K   +  AE +F  +    D+VSWN++ISG             F+ M
Sbjct: 388 DIFVGSALVDLYGKCGCMEHAEAIFKGLIS-RDIVSWNTIISGYSQHGQGEKALEAFRMM 446

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L        +T + +L +C+    +E GK       +    +   G+N  +  Y    D+
Sbjct: 447 LSEGIMPDEATFIGVLSACSFMGLVEEGKK------RFDSMSKIYGINPSIEHYACMVDI 500

Query: 420 VAAFS-------LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           +            ++ ++    +  W  V+ AC  +G+     K  K + + +     S 
Sbjct: 501 LGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSY 560

Query: 473 TLVNVISA 480
            L++ I A
Sbjct: 561 ILLSNIFA 568



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 152/298 (51%), Gaps = 3/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +    S  L+  Y      E    +F    N D+V+WNA+++   +++    G   F
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ EG + +  T + ++ + + +   + G+ VH   IK     D  +    V+MYAK 
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  +   D  SW  I+SG    +  EK + YFR+M   G + +  +L+S +
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +  + +  L  G+ +HA+ +K G+    +V   ++L+ +Y +CG +E AE  F G+  +D
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVG--SALVDLYGKCGCMEHAEAIFKGLISRD 419

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +VSWN II G++ +G+ E+A +    M L   + PD AT + ++S C+   L+ EG+ 
Sbjct: 420 IVSWNTIISGYSQHGQGEKALEAF-RMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476


>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 563

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 176/571 (30%), Positives = 299/571 (52%), Gaps = 40/571 (7%)

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI--HAL 199
           WN+++    HN    K L  + +M     + D  +  S + A A LG+   G V+  H L
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            I  G++    + + N+L+ MY++ GD+  A   F  MT +D+VSWN++I G++ NG ++
Sbjct: 61  EIGFGFD----LYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWD 116

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA ++ +E+++   ++PD  T+ +++  C   L ++EG  +HG   +  +  D++M N L
Sbjct: 117 EALEIYYELRIA-GLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGL 175

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQF------SF 368
           +  Y K   L  A+ +FN +  + D VSWN++I G     LF+E + L  +         
Sbjct: 176 LSMYFKFGRLMDAQRVFNKMV-VKDYVSWNTLICGYCQMELFEESIQLFREMVKRFRPDL 234

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            T+ ++L +C     LEFGK +H + L+ G   +    N ++  Y  CGDL+A+     R
Sbjct: 235 LTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDR 294

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           I    D+  WN +I    Q+  + E +K FK M  + +  PDS+T V ++S    L    
Sbjct: 295 IKCR-DSVSWNTLINGYIQSRSYGEGVKLFKKM--KMDLKPDSITFVTLLSISTRLADTE 351

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            GK +H    K     D  V NAL+ MY +C ++K +  VFE+    ++ TWN +I+A  
Sbjct: 352 LGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACV 411

Query: 549 QNKA---EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q +      R +   R+ E  P+  +++ IL  C+ +   R GK++H   F  GF+    
Sbjct: 412 QAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVP 471

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + +AL++MYS C               K    W++++SAYG +G+G +A+  F EM  +G
Sbjct: 472 VGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAG 531

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           I P   + ++++ ACSHSG V+EGL  +++M
Sbjct: 532 IIPDHIAFVAIIYACSHSGSVEEGLACFDHM 562



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 178/577 (30%), Positives = 283/577 (49%), Gaps = 37/577 (6%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN++I A   N      L  + +M +  ++ D+ T   +++A   +   + G VV    +
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           + G   D  + N  V+MYA+ GDL  +   F  M   D VSWN+++SG   N Y ++ L 
Sbjct: 61  EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            + E+  +G + DN +LSS + A   L  +  G+VIH L  KLG      V ++N L+SM
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNID--VIMSNGLLSM 178

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y + G +  A+R F  M  KD VSWN +I G+     FEE+  L  EM  ++   PD+ T
Sbjct: 179 YFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM--VKRFRPDLLT 236

Query: 281 VVTLISLCADSLLLRE---GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           + +++  C    LLR+   G+ VH Y +R  + +D+   N ++D Y+K   L  +   F+
Sbjct: 237 ITSVLRACG---LLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFD 293

Query: 338 AIAPMNDLVSWNSMISG------------LFKEML--YLCSQFSFSTLLAILPSCNSPES 383
            I    D VSWN++I+G            LFK+M         +F TLL+I         
Sbjct: 294 RI-KCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLKPDSITFVTLLSI---STRLAD 349

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            E GK IHC   KLGF ++ +  NAL+ MY  CG++  +  + + +    D   WN +I 
Sbjct: 350 TELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVR-DIVTWNTIIA 408

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           AC Q    ++    F+ ++Q +N    PD  TL+ ++  C  +    +GK +H    K  
Sbjct: 409 ACVQA---EDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFG 465

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                 V NALI MY +C ++K    VFE     ++ TW  ++SA+       +AL  F 
Sbjct: 466 FESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFA 525

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            +E     P+ I+ V+I+ AC+  G +  G     H+
Sbjct: 526 EMEEAGIIPDHIAFVAIIYACSHSGSVEEGLACFDHM 562



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 243/492 (49%), Gaps = 20/492 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L    +L+  Y+       +  +F E  ++D+V+WN++I+    N      L  +
Sbjct: 63  GFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIY 122

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E+   G++ D+ TL  ++ A   +  +K+G V+H L  K GM  D  + N  ++MY K 
Sbjct: 123 YELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYFKF 182

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  ++  F+ M   D VSWNT++ G       E+ +  FREM     + D ++++S +
Sbjct: 183 GRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM-VKRFRPDLLTITSVL 241

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L +L +GK +H   ++ G E    V+ +N +I  Y++CGD+ A+ +AF  + C+D
Sbjct: 242 RACGLLRDLEFGKFVHDYILRSGIEFD--VTASNIVIDTYAKCGDLLASRKAFDRIKCRD 299

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN +I+G+  +  + E   L  +M++   ++PD  T VTL+S+         G+ +H
Sbjct: 300 SVSWNTLINGYIQSRSYGEGVKLFKKMKM--DLKPDSITFVTLLSISTRLADTELGKEIH 357

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--- 358
               +     DL++ N+L+D YSK  ++  +  +F  +  + D+V+WN++I+   +    
Sbjct: 358 CDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENM-KVRDIVTWNTIIAACVQAEDC 416

Query: 359 --MLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                + SQ           TLL ILP C+   +   GK +H    K GF +     NAL
Sbjct: 417 TLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNAL 476

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  C +L     + + +    D   W  ++ A    G  ++A++ F  M ++    P
Sbjct: 477 IEMYSKCSNLKYCIRVFEDMK-TKDVVTWTALVSAYGMYGEGKKALRAFAEM-EEAGIIP 534

Query: 470 DSVTLVNVISAC 481
           D +  V +I AC
Sbjct: 535 DHIAFVAIIYAC 546



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 89/192 (46%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  S +L+  YS     + SL +F     +D+VTWN +I ACV+     +     
Sbjct: 364 GFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMI 423

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  E +  D  TLL I+   + +   +QG+ VH  + K G  +   + N  + MY+KC
Sbjct: 424 SQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIEMYSKC 483

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +L      F  M   D V+W  ++S        +K L  F EM  +G   D+++  + +
Sbjct: 484 SNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDHIAFVAII 543

Query: 182 AASACLGELSYG 193
            A +  G +  G
Sbjct: 544 YACSHSGSVEEG 555


>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 284/563 (50%), Gaps = 71/563 (12%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           LI  C D L  R G+ +H   +   +  D  + + L+ FYSKS S+  A  +F  I P  
Sbjct: 9   LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKI-PRK 67

Query: 344 DLVSWNSMI-----SGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPESLE 385
           ++ SWN+++       +  ++L L S             +F+ +  L  L S  S   L 
Sbjct: 68  NIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGL- 126

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             K +H + L+ G   +   VNAL+  Y  C +LV A  +  R+    D   WN ++   
Sbjct: 127 -AKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPER-DIVSWNAMLAGY 184

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           +Q G +++  + F+ M       P+++T V+V+ AC        G  +H    +S + +D
Sbjct: 185 SQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMD 244

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCN----------------------------- 536
             + NA+I +Y +C  +  A  +FE     +                             
Sbjct: 245 VSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQER 304

Query: 537 --LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQI 591
             L TWN +IS   QN  +  A+++FR ++     PN +++ SIL   +    L+ GK+I
Sbjct: 305 PRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEI 364

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           HG+     +  N ++++A++D Y+ C               +S  AW+S+ISAY  HG  
Sbjct: 365 HGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDA 424

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
             A+ LF+EM  +GI+P + +  S+L+AC+HSG +DE  + +N +L EY ++P  EH+ C
Sbjct: 425 NVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYAC 484

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +V +L R+GKL +A EFI  +P++P   VWGA+L+  S  GD ++GK V + LF++EPEN
Sbjct: 485 MVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPEN 544

Query: 757 VGYYISLSNMYVALGRWKDAVEI 779
            G Y+ ++N+Y   GRWKDA  I
Sbjct: 545 TGNYVIMANLYSQSGRWKDADTI 567



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 128/559 (22%), Positives = 234/559 (41%), Gaps = 86/559 (15%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM-S 147
            + G+ +H   + + ++ D+ L +  ++ Y+K G +  +   F  +   +  SWN ++ S
Sbjct: 19  FRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLIS 78

Query: 148 GCLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELS-YGKVIHALGIKLG 204
             LHN + +   L+        +  + D  +++ A+ A A L   S   K +H+  ++ G
Sbjct: 79  YTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRG 138

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            E   +V   N+LI+ YS+C ++  A   F  M  +D+VSWNA++ G++  G +E+  +L
Sbjct: 139 LEYDIFV--VNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKEL 196

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
              M     V+P+  T V+++  CA S  L  G  VH +     +  D+ + N+++  Y+
Sbjct: 197 FRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYA 256

Query: 325 KSNSLSKAELLFNAIAPMN------------------------------DLVSWNSMISG 354
           K  SL  A  LF  +   +                               L +WN++ISG
Sbjct: 257 KCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISG 316

Query: 355 L------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           L            F+ M     + +  TL +ILP  +   +L+ GK IH + ++  +  N
Sbjct: 317 LVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRN 376

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
                A++  Y  CG L  A  +  +I   S  + W  +I A   +G    A+  F  M 
Sbjct: 377 IYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIA-WTSIISAYAVHGDANVALSLFYEML 435

Query: 463 QQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
                 PD VT  +V++AC   G L+ A+                  ++ N L+  YG  
Sbjct: 436 -TNGIQPDQVTFTSVLAACAHSGELDEAW------------------KIFNVLLPEYGIQ 476

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
             ++                + CM+   S+      A+E    +  EP      ++L+  
Sbjct: 477 PLVEH---------------YACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGA 521

Query: 580 TQLGVLRHGKQIHGHVFHL 598
           +  G +  GK +   +F +
Sbjct: 522 SVAGDVELGKYVFDRLFEI 540



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 120/535 (22%), Positives = 217/535 (40%), Gaps = 78/535 (14%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE---- 66
           + L++ YS       +  +F +   K++ +WNA++ +   +      L  F  +V     
Sbjct: 42  SKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNST 101

Query: 67  --EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             +  RF  T  L  +++L   + L   + VH   ++ G+  D  + N  +  Y++C +L
Sbjct: 102 DVKPDRFTVTCALKALASLFSNSGL--AKEVHSFILRRGLEYDIFVVNALITFYSRCDEL 159

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAA 183
             +   F  M   D VSWN +++G       EKC   FR M  S E   N ++  S + A
Sbjct: 160 VLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQA 219

Query: 184 SACLGELSYGKVIHAL----GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A   +L +G  +H       IK+       VS+ N++I +Y++CG ++ A   F  M  
Sbjct: 220 CAQSNDLIFGIEVHRFVNESQIKMD------VSLWNAVIGLYAKCGSLDYARELFEEMLE 273

Query: 240 KDVV-------------------------------SWNAIIDGFALNGKFEEAFDLLHEM 268
           KD +                               +WNA+I G   N + E A D+   M
Sbjct: 274 KDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAM 333

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q      P+  T+ +++ + +    L+ G+ +HGYAIR     ++ +  +++D Y+K   
Sbjct: 334 Q-SHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGY 392

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L  A+L+F+ I     L++W S+IS             LF EML    Q    T  ++L 
Sbjct: 393 LHGAQLVFDQIKG-RSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQVTFTSVLA 451

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFSLLQRI 429
           +C     L+       W++         G+  L+  Y          G L  A   + ++
Sbjct: 452 ACAHSGELD-----EAWKI-FNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFISKM 505

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGN 483
                   W  ++   +  G  +     F  + + +   + + V + N+ S  G 
Sbjct: 506 PLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSGR 560



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 176/413 (42%), Gaps = 44/413 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +    +L+T YS       +  +F     +D+V+WNAM+    +          
Sbjct: 137 RGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKEL 196

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+    ++ ++ T + ++ A  Q N L  G  VH    ++ +  D SL N  + +YA
Sbjct: 197 FRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYA 256

Query: 120 KCGDLNSSECTFSGMHCADTV-------------------------------SWNTIMSG 148
           KCG L+ +   F  M   D +                               +WN ++SG
Sbjct: 257 KCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISG 316

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + NN  E  +  FR M   G + + V+L+S +   +    L  GK IH   I+  Y+ +
Sbjct: 317 LVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRN 376

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            YV+   ++I  Y++CG +  A+  F  +  + +++W +II  +A++G    A  L +EM
Sbjct: 377 IYVA--TAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEM 434

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-----YAIRRLLGYDLLMMNSLMDFY 323
            L   ++PD  T  ++++ CA S  L E   +       Y I+ L+ +   M+  L    
Sbjct: 435 -LTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVL---- 489

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILP 376
           S++  LS A    + +        W ++++G          ++ F  L  I P
Sbjct: 490 SRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEP 542


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 179/589 (30%), Positives = 299/589 (50%), Gaps = 37/589 (6%)

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G +  A + F  +   D  ++NA+I  ++  G F  A DL   M   R V P+  T   +
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFR-VPPNKYTFPFV 105

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  C+    L  GR++H +A    L  DL +  +L+D Y +      A  +F A  PM D
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVF-AKMPMRD 164

Query: 345 LVSWNSMISGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPESLEFGKSIH 391
           +V+WN+M++G     +Y  +             + + STL+++LP      +L  G S+H
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224

Query: 392 CWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            + L+     N   V    AL+ MY  C  LV A  +   ++  ++ + W+ +I      
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT-WSALIGGFVLC 283

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               EA   FK M  +      + ++ + +  C +L     G  LH L  KS +  D   
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
            N+L++MY +   I  A+ +F+     +  ++  ++S + QN     A  +F+ ++    
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           +P+  ++VS++ AC+ L  L+HG+  HG V   G    + I ++L+DMY+ C        
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  +   +W++MI+ YG HG G EA  LF  M N G  P   + I L++ACSHSGL
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V EG  +++ M  +Y + P  EH++C+VD+L R G L EAY+FI+++P++    VWGA+L
Sbjct: 524 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AC  H +  +GKQV+ ++ KL PE  G ++ LSN++ A GR+ +A E+
Sbjct: 584 GACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 632



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 241/514 (46%), Gaps = 37/514 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ST+L+  Y   + F  +  +F +   +DVV WNAM+     +      +   
Sbjct: 129 GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 188

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---LCNVFVNM 117
            +M +  G+R +++TL+ ++  L Q   L QG  VH   ++A +  +     +    ++M
Sbjct: 189 LDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDM 248

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVS 176
           YAKC  L  +   F GM   + V+W+ ++ G +  +   +    F++M   G       S
Sbjct: 249 YAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATS 308

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           ++SA+   A L +L  G  +HAL  K G      ++  NSL+SMY++ G I  A   F  
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHAD--LTAGNSLLSMYAKAGLINEATMLFDE 366

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +S+ A++ G+  NGK EEAF +  +MQ   +V+PDIAT+V+LI  C+    L+ 
Sbjct: 367 IAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQAC-NVQPDIATMVSLIPACSHLAALQH 425

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR  HG  I R L  +  + NSL+D Y+K   +  +  +F+ + P  D+VSWN+MI+G  
Sbjct: 426 GRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKM-PARDIVSWNTMIAGYG 484

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF  M     +    T + ++ +C+    +  GK    W        +  
Sbjct: 485 IHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKH---W---FDTMTHKY 538

Query: 405 GVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G+   M  YI   DL+A       A+  +Q +   +D   W  ++ AC  + +     K 
Sbjct: 539 GILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLG-KQ 597

Query: 458 FKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
              M Q+     + + V L N+ SA G  + A E
Sbjct: 598 VSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAE 631



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 225/478 (47%), Gaps = 19/478 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F      D   +NA+I A          +  +  M+   +  +  T   ++ A + +  
Sbjct: 55  VFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALAD 114

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR +H  +   G+  D  +    +++Y +C     +   F+ M   D V+WN +++G
Sbjct: 115 LCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAG 174

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVS-LSSAVAASACLGELSYGKVIHALGIKLGYED 207
             ++      + +  +M   G    N S L S +   A  G L  G  +HA  ++  Y D
Sbjct: 175 YANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLR-AYLD 233

Query: 208 S--PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
                V +  +L+ MY++C  +  A R F GMT ++ V+W+A+I GF L  +  EAF+L 
Sbjct: 234 QNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLF 293

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            +M +         +V + + +CA    LR G  +H    +  +  DL   NSL+  Y+K
Sbjct: 294 KDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAK 353

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
           +  +++A +LF+ IA + D +S+ +++SG            +FK+M     Q   +T+++
Sbjct: 354 AGLINEATMLFDEIA-IKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVS 412

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           ++P+C+   +L+ G+  H   +  G +  T   N+L+ MY  CG +  +  +  ++    
Sbjct: 413 LIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMP-AR 471

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           D   WN +I     +G  +EA   F SM + Q   PD VT + +I+AC +  L  EGK
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSM-KNQGFEPDDVTFICLIAACSHSGLVTEGK 528



 Score = 43.1 bits (100), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 28/233 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG         SL+  Y+     + S  +F +   +D+V+WN MI           G+H 
Sbjct: 436 RGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAG--------YGIHG 487

Query: 61  FGE--------MVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLC 111
            G+        M  +G   D  T + +++A +    + +G+     ++ K G++      
Sbjct: 488 LGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 547

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNYP--EKCLLYFREMGW 167
              V++ A+ G L+ +      M   AD   W  ++  C +H N    ++     +++G 
Sbjct: 548 ICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGP 607

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP---YVSVTNSL 217
            G   + V LS+  +A+    E +  ++I  +    G++ SP   ++ +  SL
Sbjct: 608 EGT-GNFVLLSNIFSAAGRFDEAAEVRIIQKVK---GFKKSPGCSWIEINGSL 656


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 209/725 (28%), Positives = 355/725 (48%), Gaps = 38/725 (5%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           V +L  +  LK+G  +H   IK G+     L N  +++Y+KC  +  +   F  M C D 
Sbjct: 26  VVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDV 85

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW  I+S  + N   E+ L  F  M  SG   +  + SS + +   LG+ SYGK IHA 
Sbjct: 86  VSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHAS 145

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            IK G+E +  +   +SLI +YS+    E A + F  M   D VSW  +I      GK  
Sbjct: 146 SIKHGFESNQILG--SSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCS 203

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMMNS 318
            A  +  EM L   V  +  T V L  L A S + L+ G+ +H +AI   +  +L++  +
Sbjct: 204 HALRIYMEM-LEAQVSSNEFTFVRL--LAASSFIGLQYGKLIHAHAIVLGVKLNLVLKTA 260

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--------- 369
           L++ YS+   +  A +  + + P  D++ W ++ISGL + M +  +  +F          
Sbjct: 261 LVNMYSRCQRIEDA-IKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSA 319

Query: 370 ---TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              T L++L  C S  SL+ G+ IH   ++ G  ++    NAL+ MY+ C  +V     +
Sbjct: 320 SNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRM 379

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            R   + +   W  +I    ++G  Q+++  F  M +     P+S TL  V+  C  ++ 
Sbjct: 380 FRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEM-RTVGVQPNSFTLSIVLRVCSAIKS 438

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
            ++   LHG  +K+    D  V NAL+  Y     +  A  V +     +  T+  + + 
Sbjct: 439 PYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATR 498

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            +Q      AL +  H+   + + +  S+    SA   LG +  GKQ+H +    G    
Sbjct: 499 LNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCC 558

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             +++ L+D+Y                      +W+ +IS    +G    A+  F +M  
Sbjct: 559 LSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRL 618

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            GI+P   + + +LS CSH GLVD GLQY+++M E +DV P+++H+VC+VD+LGR+G+L+
Sbjct: 619 RGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLE 678

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EA   I+ +P++P   ++  +L+ACS H +  +G+ VA    +L P +  +++ L  +Y 
Sbjct: 679 EAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYD 738

Query: 769 ALGRW 773
             GR+
Sbjct: 739 DCGRY 743



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 187/722 (25%), Positives = 325/722 (45%), Gaps = 47/722 (6%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           E +   F E   +DVV+W  +++A ++N      L  F  MV  G   ++ T   I+ + 
Sbjct: 71  EHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSC 130

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
             +     G+ +H  SIK G  ++  L +  +++Y++      +   FS M   DTVSW 
Sbjct: 131 FALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWT 190

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           T+++ C+        L  + EM  +   ++  +    +AAS+ +G L YGK+IHA  I L
Sbjct: 191 TVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVL 249

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G + +  + +  +L++MYS+C  IE A +        DV+ W AII G A N KF+EA  
Sbjct: 250 GVKLN--LVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVA 307

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
             H+M++   V     T ++++S+C   L L  GR +H   IR  L  D+ + N+L+D Y
Sbjct: 308 AFHKMEI-SGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMY 366

Query: 324 SKSNSLSKAEL-LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
            K + + +  L +F  I   N ++SW S+I+G            LF EM  +  Q +  T
Sbjct: 367 MKCSCIVEHGLRMFRGIKSPN-VISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFT 425

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L  +L  C++ +S      +H   +K     + +  NAL+  Y   G +  A+ +++ ++
Sbjct: 426 LSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMN 485

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D+  +  +     Q G+ + A+     M    +   D  +L    SA  +L     G
Sbjct: 486 QR-DSITYTSLATRLNQMGYHELALSVISHMF-NADVKIDGFSLTCFFSASASLGRIETG 543

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K LH  +LKS +     V N LI +YG+   +  A   F      ++ +WN +IS  + N
Sbjct: 544 KQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASN 603

Query: 551 KAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                AL  F  +     +P+ I+ + +LS C+  G++  G Q     FH          
Sbjct: 604 GHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQ----YFH---------- 649

Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
            ++ +M+     +  +  ++   G  G+  EA+ +   M    + P  S   +LL+ACS 
Sbjct: 650 -SMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETM---PLEPDASIYKTLLAACSI 705

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
              ++ G       LE   + P    H+ +V +    G+    Y+  +      K   W 
Sbjct: 706 HRNMNLGEDVARRGLELNPLDP--AFHLLLVKLYDDCGR----YDLGEKTRRSIKQKGWT 759

Query: 728 AM 729
           AM
Sbjct: 760 AM 761



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 161/671 (23%), Positives = 303/671 (45%), Gaps = 81/671 (12%)

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S V +   L  L  G  IH+  IKLG +D  ++ + N+L+S+YS+C  +E A + F  M 
Sbjct: 24  SKVVSLCNLKSLKEGVCIHSPIIKLGLQD--HLYLNNNLLSLYSKCFSVEHARQFFDEMP 81

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           C+DVVSW  I+     N + EEA D+  +  ++    P+  T  +++  C        G+
Sbjct: 82  CRDVVSWTGILSAHIKNERHEEALDIF-DFMVLSGPYPNAFTFSSILRSCFALGDFSYGK 140

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H  +I+     + ++ +SL+D YS+ +S   A  LF+ +    D VSW ++I+     
Sbjct: 141 RIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDS-GDTVSWTTVIASCVQA 199

Query: 355 --------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                   ++ EML      ++F+F  LLA     +S   L++GK IH   + LG   N 
Sbjct: 200 GKCSHALRIYMEMLEAQVSSNEFTFVRLLA----ASSFIGLQYGKLIHAHAIVLGVKLNL 255

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
           +   AL++MY  C  +  A   + +++   D   W  +I    QN  FQEA+  F  M +
Sbjct: 256 VLKTALVNMYSRCQRIEDAIK-VSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKM-E 313

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI- 522
               S  + T ++++S C ++     G+ +H   +++ +  D  V NAL+ MY +C  I 
Sbjct: 314 ISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIV 373

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSAC 579
           +    +F    + N+ +W  +I+ F+++  +  +L LF   R +  +PN  ++  +L  C
Sbjct: 374 EHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVC 433

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWS 624
           + +       ++HGH+       +  + +AL+D Y+               N + +  ++
Sbjct: 434 SAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYT 493

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY------ 678
           S+ +     G    A+ +   M N+ ++    S+    SA +  G ++ G Q +      
Sbjct: 494 SLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKS 553

Query: 679 ---------NNMLEEYD---------------VRPETEHHVCIVDMLGRSGKLQ---EAY 711
                    N +++ Y                  P+      ++  L  +G +     A+
Sbjct: 554 GLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAF 613

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV---AELLFKLEPENVGYYISLSNMYV 768
           + ++   IQP    +  +LS CSH G   MG Q       +  +EP++  +Y+ L ++  
Sbjct: 614 DDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQS-DHYVCLVDILG 672

Query: 769 ALGRWKDAVEI 779
             GR ++A+ I
Sbjct: 673 RAGRLEEAMNI 683


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 193/682 (28%), Positives = 344/682 (50%), Gaps = 41/682 (6%)

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +G+  +D +S   I       N+ E   LY  E+  SG Q  +  +  ++  +      +
Sbjct: 8   AGLRLSDLIS--KIKDASYSGNWQEALQLY-HEIRISGAQLSDTWVLPSILKACSNTSFN 64

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   IK G + S   S+ NS I  Y + GD+++A+RAF     KD VSWN ++ G
Sbjct: 65  LGTAMHGCLIKQGCQSS--TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHG 122

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              NG          + +     +P+I++++ +I    +  +  +G + HGY  R     
Sbjct: 123 NFSNGSIMAGLCWFIKGRFAH-FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSA 181

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            L + NSL+  Y++ + +  A  LF  ++  ND+VSW+ MI G            +F+ M
Sbjct: 182 ILSVQNSLLSLYAEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNM 240

Query: 360 LYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +          T++++L +C + + +  G  +H   +  G  ++    N+L+ MY  C +
Sbjct: 241 VTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFN 300

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + +AF   + I   +  S WN+++ A   N    EA+    +M ++  A  D VTL NV+
Sbjct: 301 VHSAFKAFKEIPEKNIIS-WNLMLSAYILNESHLEALALLGTMVRE-GAEKDEVTLANVL 358

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
               +   + + +S+HG+ ++     +  + N++I  Y +C  ++ A  VF+     ++ 
Sbjct: 359 QIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVV 418

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE--PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
            W+ MI+ F++N     A+ +F+ +  E  PN +SI++++ AC     LR  K  HG   
Sbjct: 419 AWSTMIAGFARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAV 478

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G      I ++++DMYS C               K+   WS+MISA+  +G   EA+ 
Sbjct: 479 RRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALM 538

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF ++  +G +P   + +SLLSACSH GL++EGL ++ +M++++ + P  EH+ CIVDML
Sbjct: 539 LFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDML 598

Query: 702 GRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
            R+GK  EA E I+ LP + + G  +WG +LS+C  +G+  +G   A  + +LEP +   
Sbjct: 599 SRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAG 658

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+  SN+Y   G   D+ ++ +
Sbjct: 659 YMLASNLYANCGLMIDSAKMRR 680



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 175/640 (27%), Positives = 298/640 (46%), Gaps = 51/640 (7%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L  + E+   G +   T +L  +           G  +H   IK G  + +S+ N  ++
Sbjct: 31  ALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANSTID 90

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y K GDL+S++  F      D+VSWN ++ G   N      L +F +  ++  Q +  S
Sbjct: 91  FYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISS 150

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L   + A   L   S G   H    + G+  S  +SV NSL+S+Y++   +  A + F  
Sbjct: 151 LLLVIQAFRELKIYSQGFAFHGYIFRSGF--SAILSVQNSLLSLYAEV-HMYFAHKLFGE 207

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M+ + DVVSW+ +I GF   G+ E+ F +   M     + PD  TVV+++  C +   + 
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
            G  VHG  I R L  DL + NSL+D YSK  ++  A   F  I P  +++SWN M+S  
Sbjct: 268 LGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEI-PEKNIISWNLMLSAY 326

Query: 354 ----------GLFKEMLYLCSQFSFSTLLAILP-SCNSPESLEFGKSIHCWQLKLGFSNN 402
                      L   M+   ++    TL  +L  + +  +SL+  +S+H   ++ G+ +N
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKGYESN 385

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            + +N+++  Y  C +LV    ++    +  D   W+ +I    +NG   EAI  FK M 
Sbjct: 386 ELLLNSVIDAYAKC-NLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMN 444

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           ++    P++V+++N++ AC       + K  HG+A++  +  +  +  ++I MY +C DI
Sbjct: 445 EE--VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDI 502

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC 579
           +++   F      N+  W+ MISAF  N     AL LF  ++    +PN ++ +S+LSAC
Sbjct: 503 EASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSAC 562

Query: 580 TQLGVLRHG-----KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +  G++  G       +  H    G +  S I    +DM S                  G
Sbjct: 563 SHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCI----VDMLSRA----------------G 602

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           K  EA+EL  ++    +    S   +LLS+C   G +  G
Sbjct: 603 KFNEALELIEKLPKE-MEAGASIWGTLLSSCRSYGNISLG 641



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 248/497 (49%), Gaps = 20/497 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + S +  Y      +S+   F  T NKD V+WN M+     N  ++ GL +F +      
Sbjct: 85  ANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHF 144

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + + ++LL+++ A  ++    QG   H    ++G  A  S+ N  +++YA+   +  +  
Sbjct: 145 QPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHK 203

Query: 130 TFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACL 187
            F  M    D VSW+ ++ G +     E+  L FR M   +G   D V++ S + A   L
Sbjct: 204 LFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNL 263

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            ++S G ++H L I  G ED  +V   NSLI MYS+C ++ +A +AF  +  K+++SWN 
Sbjct: 264 KDISLGTMVHGLVIFRGLEDDLFVG--NSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNL 321

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  + LN    EA  LL  M +    E D  T+  ++ +    L   + RSVHG  IR+
Sbjct: 322 MLSAYILNESHLEALALLGTM-VREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRK 380

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYL 362
               + L++NS++D Y+K N +  A ++F+ +    D+V+W++MI+G  +     E + +
Sbjct: 381 GYESNELLLNSVIDAYAKCNLVELARMVFDGMNK-KDVVAWSTMIAGFARNGKPDEAISV 439

Query: 363 CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
             Q +        +++ ++ +C     L   K  H   ++ G ++      +++ MY  C
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKC 499

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           GD+ A+     +I    +  CW+ +I A   NG   EA+  F+ + +Q    P++VT ++
Sbjct: 500 GDIEASIRAFNQIPQK-NVVCWSAMISAFRINGLAHEALMLFEKI-KQNGTKPNAVTALS 557

Query: 477 VISACGNLELAFEGKSL 493
           ++SAC +  L  EG S 
Sbjct: 558 LLSACSHGGLMEEGLSF 574



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 228/467 (48%), Gaps = 25/467 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVS-YFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A L    SLL+ Y+ V  YF   L  F E +   DVV+W+ MI   V+      G  
Sbjct: 178 GFSAILSVQNSLLSLYAEVHMYFAHKL--FGEMSVRNDVVSWSVMIGGFVQIGEDEQGFL 235

Query: 60  FFGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F  MV E GI  D  T++ ++ A T +  +  G +VH L I  G+  D  + N  ++MY
Sbjct: 236 MFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMY 295

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KC +++S+   F  +   + +SWN ++S  + N    + L     M   G + D V+L+
Sbjct: 296 SKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLA 355

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + +  +    +    + +H + I+ GYE +    + NS+I  Y++C  +E A   F GM 
Sbjct: 356 NVLQIAKHFLDSLKCRSVHGVIIRKGYESNEL--LLNSVIDAYAKCNLVELARMVFDGMN 413

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDVV+W+ +I GFA NGK +EA  +  +M     V P+  +++ L+  CA S  LR+ +
Sbjct: 414 KKDVVAWSTMIAGFARNGKPDEAISVFKQMN--EEVIPNNVSIMNLMEACAVSAELRQSK 471

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
             HG A+RR L  ++ +  S++D YSK   +  +   FN I P  ++V W++MIS     
Sbjct: 472 WAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQI-PQKNVVCWSAMISAFRIN 530

Query: 354 GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIG 405
           GL  E L L  +   +       T L++L +C+    +E G S     + K G       
Sbjct: 531 GLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEH 590

Query: 406 VNALMHMYINCGDLVAAFSLLQRISH--NSDTSCWNIVIVACTQNGH 450
            + ++ M    G    A  L++++     +  S W  ++ +C   G+
Sbjct: 591 YSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGN 637



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 155/301 (51%), Gaps = 8/301 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L    SL+  YS      S+   F E   K++++WN M++A + N   +  L  
Sbjct: 279 RGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALAL 338

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            G MV EG   D  TL  ++          + R VH + I+ G  ++  L N  ++ YAK
Sbjct: 339 LGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAK 398

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA--DNVSLS 178
           C  +  +   F GM+  D V+W+T+++G   N  P++ +  F++M    E+   +NVS+ 
Sbjct: 399 CNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM---NEEVIPNNVSIM 455

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A A   EL   K  H + ++ G   +  V +  S+I MYS+CGDIEA+ RAF  + 
Sbjct: 456 NLMEACAVSAELRQSKWAHGIAVRRGL--ASEVDIGTSIIDMYSKCGDIEASIRAFNQIP 513

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K+VV W+A+I  F +NG   EA  L  +++     +P+  T ++L+S C+   L+ EG 
Sbjct: 514 QKNVVCWSAMISAFRINGLAHEALMLFEKIK-QNGTKPNAVTALSLLSACSHGGLMEEGL 572

Query: 299 S 299
           S
Sbjct: 573 S 573


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 183/572 (31%), Positives = 296/572 (51%), Gaps = 39/572 (6%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + + +WN +I     NG F +  ++   M     V  +  T   L+  CA+   ++ G  
Sbjct: 9   RSLYTWNLMIRDSTNNGFFTQTLNIYSSMA-HSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG+ ++     D  +  +L+D YSK + ++ A  +F+ + P   +VSWN+M+S      
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEM-PQRSVVSWNAMVSAYSRRS 126

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF---GKSIHCWQLKLGFSNNTI 404
                  L KEM  L  + + ST ++IL   ++ +S EF   GKSIHC  +KLG     +
Sbjct: 127 SMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEV 186

Query: 405 GV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
            + N+LM MY+    +  A  +   +   S  S W  +I    + GH  EA   F  M Q
Sbjct: 187 SLANSLMGMYVQFCLMDEARKVFDLMDEKSIIS-WTTMIGGYVKIGHAVEAYGLFYQM-Q 244

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            Q+   D V  +N+IS C  +       S+H L LK        V+N LITMY +C ++ 
Sbjct: 245 HQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLT 304

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           SA  +F+     ++ +W  MI+ +        AL+LFR +   +  PN  ++ +++SAC 
Sbjct: 305 SARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACA 364

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
            LG L  G++I  ++F  G + +  + ++L+ MYS C               K    W+S
Sbjct: 365 DLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTS 424

Query: 626 MISAYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           MI++Y  HG G EAI LFH+M  + GI P      S+  ACSHSGLV+EGL+Y+ +M ++
Sbjct: 425 MINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKD 484

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           + + P  EH  C++D+LGR G+L  A   I+ +P   +  VWG +LSAC  HG+ ++G+ 
Sbjct: 485 FGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGEL 544

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
               L    P + G Y+ ++N+Y +LG+WK+A
Sbjct: 545 ATVRLLDSSPGSSGSYVLMANLYTSLGKWKEA 576



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 249/554 (44%), Gaps = 28/554 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            + + TWN MI     N      L+ +  M   G+  ++ T  +++ A   +  ++ G +
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   +K G  AD+ +    V+MY+KC  + S+   F  M     VSWN ++S     + 
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLG--YEDSP 209
            ++ L   +EM   G +    +  S ++  + L    +   GK IH   IKLG  Y +  
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLE-- 185

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            VS+ NSL+ MY Q   ++ A + F  M  K ++SW  +I G+   G   EA+ L ++MQ
Sbjct: 186 -VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQ 244

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
             +SV  D    + LIS C     L    SVH   ++        + N L+  Y+K  +L
Sbjct: 245 -HQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNL 303

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
           + A  +F+ I     ++SW SMI+G            LF+ M+    + + +TL  ++ +
Sbjct: 304 TSARRIFDLIIE-KSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSA 362

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C    SL  G+ I  +    G  ++     +L+HMY  CG +V A  + +R++ + D + 
Sbjct: 363 CADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVT-DKDLTV 421

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W  +I +   +G   EAI  F  MT  +   PD++   +V  AC +  L  EG      +
Sbjct: 422 WTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFK-S 480

Query: 498 LKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFS-QNKAE 553
           ++   G+   V++   LI + GR   +  A    +    +     W  ++SA       E
Sbjct: 481 MQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVE 540

Query: 554 VRALELFRHLEFEP 567
           +  L   R L+  P
Sbjct: 541 LGELATVRLLDSSP 554



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 226/504 (44%), Gaps = 29/504 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A     T+L+  YS  S+  S+  +F E   + VV+WNAM++A      +   L   
Sbjct: 76  GFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLL 135

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLK---QGRVVHCLSIKAGMI-ADSSLCNVFVNM 117
            EM   G    ++T + I+S  + ++  +    G+ +HC  IK G++  + SL N  + M
Sbjct: 136 KEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGM 195

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y +   ++ +   F  M     +SW T++ G +   +  +    F +M       D V  
Sbjct: 196 YVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVF 255

Query: 178 SSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            + ++    + +L     +H+L +K G  E  P   V N LI+MY++CG++ +A R F  
Sbjct: 256 LNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP---VENLLITMYAKCGNLTSARRIFDL 312

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  K ++SW ++I G+   G   EA DL   M +   + P+ AT+ T++S CAD   L  
Sbjct: 313 IIEKSMLSWTSMIAGYVHLGHPGEALDLFRRM-IRTDIRPNGATLATVVSACADLGSLSI 371

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+ +  Y     L  D  +  SL+  YSK  S+ KA  +F  +    DL  W SMI+   
Sbjct: 372 GQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTD-KDLTVWTSMINSYA 430

Query: 354 --GLFKEMLYLCSQFSFSTLLAILP----------SCNSPESLEFG-KSIHCWQLKLGFS 400
             G+  E + L  +   +T   I+P          +C+    +E G K     Q   G +
Sbjct: 431 IHGMGNEAISLFHK--MTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGIT 488

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFK 459
                   L+ +    G L  A + +Q +  +     W  ++ AC  +G+ +   + T +
Sbjct: 489 PTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVR 548

Query: 460 SMTQQQNASPDSVTLVNVISACGN 483
            +     +S   V + N+ ++ G 
Sbjct: 549 LLDSSPGSSGSYVLMANLYTSLGK 572


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 187/617 (30%), Positives = 324/617 (52%), Gaps = 51/617 (8%)

Query: 205 YEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           +++ P+ +V  TN++I  Y + G++  A   F  M  + VV+W  +I G+A + +F EAF
Sbjct: 65  FDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAF 124

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLM 320
           +L  +M     + PD  T+ TL+S   +   + E   VHG+ ++  +GYD  L++ NSL+
Sbjct: 125 NLFADM-CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVK--VGYDSTLMVCNSLL 181

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE---------------MLYLCSQ 365
           D Y K+ SL  A  LF  +A   D V++N++++G  KE               + +  S+
Sbjct: 182 DSYCKTRSLGLACHLFKHMAE-KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSE 240

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           F+F+   A+L +    + +EFG+ +H + +K  F  N    NAL+  Y     +V A  L
Sbjct: 241 FTFA---AVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKL 297

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGN 483
              +    D   +N++I  C  NG  +E+++ F+ +  T+         TL+++ +   N
Sbjct: 298 FYEMP-EVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLN 356

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           LE+   G+ +H  A+ +    +  V N+L+ MY +C     A+ +F    + +   W  +
Sbjct: 357 LEM---GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTAL 413

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS + Q       L+LF  +   +   +  +  SIL AC  L  L  GKQ+H  +   G 
Sbjct: 414 ISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGC 473

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
             N F  SAL+DMY+ C               +++ +W+++ISAY  +G G  A+  F +
Sbjct: 474 LSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQ 533

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M +SG++P   S +S+L ACSH GLV+EGLQY+N+M + Y + P  EH+  +VDML RSG
Sbjct: 534 MIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSG 593

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP-ENVGYYISLS 764
           +  EA + +  +P +P   +W ++L++C  H + ++  + A+ LF ++   +   Y+S+S
Sbjct: 594 RFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMS 653

Query: 765 NMYVALGRWKDAVEIGK 781
           N+Y A G W    ++ K
Sbjct: 654 NIYAAAGEWDSVGKVKK 670



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 266/583 (45%), Gaps = 48/583 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           ++ +++  Y       ++ +LF     + VVTW  +I    ++   +   + F +M   G
Sbjct: 75  STNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHG 134

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  TL  ++S  T+   + +   VH   +K G  +   +CN  ++ Y K   L  + 
Sbjct: 135 MVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLAC 194

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D V++N +++G     +    +  F +M   G +    + ++ + A   + 
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD 254

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++ +G+ +H+  +K  +  + +V+  N+L+  YS+   I  A + F+ M   D +S+N +
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVA--NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVL 312

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I   A NG+ EE+ +L  E+Q  R  +       TL+S+ A+SL L  GR +H  AI   
Sbjct: 313 ITCCAWNGRVEESLELFRELQFTR-FDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTD 371

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              ++L+ NSL+D Y+K +   +A  +F  +A  +  V W ++ISG            LF
Sbjct: 372 AISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSS-VPWTALISGYVQKGLHEDGLKLF 430

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM         +T  +IL +C +  SL  GK +H   ++ G  +N    +AL+ MY  C
Sbjct: 431 VEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKC 490

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  + Q +   +  S WN +I A  QNG    A+++F+ M       P+SV+ ++
Sbjct: 491 GSIKEALQMFQEMPVRNSVS-WNALISAYAQNGDGGHALRSFEQMI-HSGLQPNSVSFLS 548

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +  L  EG      ++  +  L+ R ++     Y    D+   S  F+      
Sbjct: 549 ILCACSHCGLVEEGLQYFN-SMTQVYKLEPRREH-----YASMVDMLCRSGRFDE----- 597

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                              A +L   + FEP+EI   SIL++C
Sbjct: 598 -------------------AEKLMARMPFEPDEIMWSSILNSC 621



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 233/501 (46%), Gaps = 29/501 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + L    SLL +Y        +  LF     KD VT+NA++T   +       ++ F
Sbjct: 169 GYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLF 228

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + G R    T   +++A  QM+ ++ G+ VH   +K   + +  + N  ++ Y+K 
Sbjct: 229 FKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKH 288

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  M   D +S+N +++ C  N   E+ L  FRE+ ++         ++ +
Sbjct: 289 DRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           + +A    L  G+ IH+  I    +    V V NSL+ MY++C     A R F  +  + 
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVT--DAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS 406

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V W A+I G+   G  E+   L  EM   + +  D AT  +++  CA+   L  G+ +H
Sbjct: 407 SVPWTALISGYVQKGLHEDGLKLFVEMHRAK-IGADSATYASILRACANLASLTLGKQLH 465

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
              IR     ++   ++L+D Y+K  S+ +A  +F  + P+ + VSWN++IS        
Sbjct: 466 SRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEM-PVRNSVSWNALISAYAQNGDG 524

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNS----PESLEFGKSI-HCWQLKLGFSNNTI 404
                 F++M++   Q +  + L+IL +C+      E L++  S+   ++L+    +   
Sbjct: 525 GHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYA- 583

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK---SM 461
              +++ M    G    A  L+ R+    D   W+ ++ +C  + + + AIK      +M
Sbjct: 584 ---SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNM 640

Query: 462 TQQQNASPDSVTLVNVISACG 482
              ++A+P  V++ N+ +A G
Sbjct: 641 KGLRDAAP-YVSMSNIYAAAG 660



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 164/393 (41%), Gaps = 55/393 (13%)

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS------------------ 436
           +K GF  NT   N  +  ++  GDL AA  L   + H +  S                  
Sbjct: 34  IKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTAR 93

Query: 437 ------------CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
                        W ++I    Q+  F EA   F  M  +    PD +TL  ++S     
Sbjct: 94  SLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC-RHGMVPDHITLATLLSGFTEF 152

Query: 485 ELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           E   E   +HG  +K  +G D+   V N+L+  Y + R +  A  +F+     +  T+N 
Sbjct: 153 ESVNEVAQVHGHVVK--VGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNA 210

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +++ +S+      A+ LF   + L F P+E +  ++L+A  Q+  +  G+Q+H  V    
Sbjct: 211 LLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCN 270

Query: 600 FQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFH 644
           F  N F+++ALLD YS                     +++ +I+   ++G+  E++ELF 
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           E+  +     +    +LLS  ++S  ++ G Q ++  +   D   E      +VDM  + 
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVT-DAISEVLVGNSLVDMYAKC 389

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            K  EA     +L  Q     W A++S     G
Sbjct: 390 DKFGEANRIFADLAHQSSVP-WTALISGYVQKG 421



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 31/215 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+++ + ++L+  Y+     + +L +F E   ++ V+WNA+I+A  +N      L  F
Sbjct: 472 GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSF 531

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF------- 114
            +M+  G++ +S + L I+ A +           HC  ++ G+   +S+  V+       
Sbjct: 532 EQMIHSGLQPNSVSFLSILCACS-----------HCGLVEEGLQYFNSMTQVYKLEPRRE 580

Query: 115 -----VNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNYPE--KCLLYFREM 165
                V+M  + G  + +E   + M    D + W++I++ C +H N     K       M
Sbjct: 581 HYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNM 640

Query: 166 GWSGEQADNVSLSSAVAASACLGEL-SYGKVIHAL 199
               + A  VS+S+  AA+   GE  S GKV  AL
Sbjct: 641 KGLRDAAPYVSMSNIYAAA---GEWDSVGKVKKAL 672


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 174/537 (32%), Positives = 289/537 (53%), Gaps = 38/537 (7%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T  +L+ LCA    L  GR+VH     R +  + L   +L + Y+K    + A  +
Sbjct: 57  PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116

Query: 336 FNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS-----TLLAILPSCNSPE 382
           F+ + P+ D V+WN++++G  +        EM+    +         TL+++LP+C +  
Sbjct: 117 FDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANAR 175

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +L   +  H + ++ G         A++  Y  CGD+ AA  +   +   +  S WN +I
Sbjct: 176 ALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVS-WNAMI 234

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               QNG  +EA+  F  M ++     D V+++  + ACG L    EG  +H L ++  +
Sbjct: 235 DGYAQNGDSREALALFNRMVEEGVDVTD-VSVLAALQACGELGCLDEGMRVHELLVR--I 291

Query: 503 GLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
           GLD+ V   NALITMY +C+ +  AS VF+        +WN MI   +QN     A+ LF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             ++ E   P+  ++VS++ A   +      + IHG+   L   ++ ++ +AL+DMY+ C
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411

Query: 618 -KSNAA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
            + N A              W++MI  YG HG G  A+ELF EM + GI P +++ +S+L
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACSH+GLVDEG +Y+ +M E+Y + P  EH+  +VD+LGR+GKL EA+ FI+ +P+ P 
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPG 531

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             V+GAML AC  H + ++ ++ A+ +F+L P+   Y++ L+N+Y     WKD   +
Sbjct: 532 LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARV 588



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 18/459 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +    +T+L   Y+       +  +F     +D V WNA++     N    M +  
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              M EE G R DS TL+ ++ A      L   R  H  +I++G+    ++    ++ Y 
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGD+ ++   F  M   ++VSWN ++ G   N    + L  F  M   G    +VS+ +
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+ A   LG L  G  +H L +++G + +  VSV N+LI+MYS+C  ++ A   F  +  
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSN--VSVMNALITMYSKCKRVDLASHVFDELDR 325

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +  VSWNA+I G A NG  E+A  L   MQL  +V+PD  T+V++I   AD     + R 
Sbjct: 326 RTQVSWNAMILGCAQNGCSEDAVRLFTRMQL-ENVKPDSFTLVSVIPALADISDPLQARW 384

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY+IR  L  D+ ++ +L+D Y+K   ++ A +LFN+ A    +++WN+MI G     
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHG 443

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGV 406
                  LF+EM  +    + +T L++L +C+    ++ G+      +   G        
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             ++ +    G L  A++ +Q++  +   S +  ++ AC
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC 542



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 228/501 (45%), Gaps = 30/501 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH      G+ +++       NMYAKC     +   F  M   D V+WN +++G
Sbjct: 75  LATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAG 134

Query: 149 CLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
              N      + +  R     GE+ D+++L S + A A    L+  +  HA  I+ G E+
Sbjct: 135 YARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEE 194

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
              V+V  +++  Y +CGDI AA   F  M  K+ VSWNA+IDG+A NG   EA  L + 
Sbjct: 195 --LVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNR 252

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   V+    +V+  +  C +   L EG  VH   +R  L  ++ +MN+L+  YSK  
Sbjct: 253 M-VEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A  +F+ +      VSWN+MI G            LF  M     +    TL++++
Sbjct: 312 RVDLASHVFDELDRRTQ-VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           P+          + IH + ++L    +   + AL+ MY  CG +  A  L    +     
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHV 429

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I     +G  + A++ F+ M +     P+  T ++V+SAC +  L  EG+  + 
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEM-KSIGIVPNETTFLSVLSACSHAGLVDEGRE-YF 487

Query: 496 LALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK- 551
            ++K   GL+  +++   ++ + GR   +  A    +    +  L  +  M+ A   +K 
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547

Query: 552 ---AEVRALELFRHLEFEPNE 569
              AE  A ++F   E  P E
Sbjct: 548 VELAEESAQKIF---ELGPQE 565



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 149/339 (43%), Gaps = 37/339 (10%)

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           A         A+  F +M+    A P   T  +++  C        G+++H  A  +  G
Sbjct: 33  ASAARSDLPAALAAFVAMSSA-GAPPVLRTFTSLLKLCAARGDLATGRAVH--AQLAARG 89

Query: 504 LDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +D+      AL  MY +CR    A  VF+     +   WN +++ +++N     A+E+  
Sbjct: 90  IDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149

Query: 562 HLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            ++ E    P+ I++VS+L AC     L   ++ H      G +E   +++A+LD Y  C
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC 209

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K++ +W++MI  Y  +G   EA+ LF+ M   G+  T  SV++ L
Sbjct: 210 GDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLP 718
            AC   G +DEG++ +     E  VR   + +V +    + M  +  ++  A      L 
Sbjct: 270 QACGELGCLDEGMRVH-----ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELD 324

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            + +   W AM+  C+ +G     +    L  +++ ENV
Sbjct: 325 RRTQVS-WNAMILGCAQNG---CSEDAVRLFTRMQLENV 359



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 157/351 (44%), Gaps = 17/351 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++    +L+T YS     + +  +F E   +  V+WNAMI  C +N C    +  F
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E ++ DS TL+ ++ AL  ++   Q R +H  SI+  +  D  +    ++MYAKC
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +N +   F+       ++WN ++ G   + + +  +  F EM   G   +  +  S +
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A +  G +  G+  +   +K  Y   P +    +++ +  + G ++ A    W    K 
Sbjct: 472 SACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA----WAFIQKM 526

Query: 242 VVSWNAIIDGFALNG-KFEEAFDLLHE-MQLMRSVEPD-------IATVVTLISLCADSL 292
            +     + G  L   K  +  +L  E  Q +  + P        +A +    S+  D  
Sbjct: 527 PMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVA 586

Query: 293 LLREGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPM 342
            +R     +G  +++  G+ ++ + N +  FYS S +  +A+ +++ +A +
Sbjct: 587 RVRTAMEKNG--LQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 173/511 (33%), Positives = 272/511 (53%), Gaps = 31/511 (6%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL- 355
            R++HG ++      D  + ++L   Y K +    A  +F+ + P  D + WN++++GL 
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTV-PSPDTILWNTLLAGLP 191

Query: 356 -------FKEMLYLCSQFSFSTLLAI-LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  F  M+        ST LA  L +      +  G+ +H + +K G + +   V 
Sbjct: 192 GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            LM +Y  CGD+ +A  L  R+  N D   +N +I   + NG  + +++ FK +T     
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMD-NPDLVAYNALISGYSVNGMVESSVELFKELTAS-GW 309

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+S TLV VI            + LH   +K+ +  D  V  AL T+Y R  D++SA +
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGV 584
           +F++     + +WN MIS ++QN     A+ LF+    L  +PN I+I S LSAC  LG 
Sbjct: 370 IFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGA 429

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISA 629
           L  GK +H  +     + N ++ +AL+DMY+ C S A               +W++MIS 
Sbjct: 430 LSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           YG HG+G EA++L+ +M ++ I PT S+ +S++ ACSH GLVDEG + +  M  EY + P
Sbjct: 490 YGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITP 549

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHHGDTKMGKQVAEL 748
             EH  C+VD+LGR+GKL EA E I   P     PGVWGA+L AC  H ++ + K  ++ 
Sbjct: 550 GIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQK 609

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           LF+L+ EN GYY+ LSN+Y +   + +A  +
Sbjct: 610 LFELDSENAGYYVLLSNLYTSKKHYSEAAVV 640



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 206/419 (49%), Gaps = 21/419 (5%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           N     R +H LS+ AG  AD+ + +    +Y K    + +   F  +   DT+ WNT++
Sbjct: 128 NDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLL 187

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
           +G   +   E    + R +     + D+ +L+S++ A+A    ++ G+ +H  G+K G  
Sbjct: 188 AGLPGSEALEA---FVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
           +  +  V   L+S+YS+CGD+++A+  F  M   D+V++NA+I G+++NG  E + +L  
Sbjct: 245 EHEH--VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFK 302

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           E+       P+ +T+V +I + +        R +H + ++  L  D L+  +L   Y + 
Sbjct: 303 ELT-ASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRL 361

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
           N +  A  +F+A+     + SWN+MISG            LF+ M  L  Q +  T+ + 
Sbjct: 362 NDMESARSIFDAMLE-KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISST 420

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L +C    +L  GK +H    K     N   + AL+ MY  CG +  A S+  R+  N +
Sbjct: 421 LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMD-NKN 479

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
              WN +I     +G   EA+K +K M   +   P S T ++VI AC +  L  EG+ +
Sbjct: 480 VVSWNAMISGYGLHGQGAEALKLYKDMLDAR-ILPTSSTFLSVIYACSHGGLVDEGQKV 537



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 226/463 (48%), Gaps = 31/463 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ A    +++L   Y  +S  + +  +F    + D + WN ++     +      L  F
Sbjct: 144 GYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSE----ALEAF 199

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MV+ G +R DSTTL   + A  + + +  GR VH   +K G+     +    +++Y+K
Sbjct: 200 VRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSK 259

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD++S++  F  M   D V++N ++SG   N   E  +  F+E+  SG + ++ +L + 
Sbjct: 260 CGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAV 319

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +  G     + +HA  +K   +    VS   +L ++Y +  D+E+A   F  M  K
Sbjct: 320 IPVYSPFGHELLARCLHAFVVKARLDADALVS--TALTTLYCRLNDMESARSIFDAMLEK 377

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            + SWNA+I G+A NG  E A  L   MQ + +V+P+  T+ + +S CA    L  G+ V
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFQLMQEL-NVQPNPITISSTLSACAHLGALSLGKWV 436

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H    +  L  ++ +M +L+D Y+K  S+++A  +F+ +   N +VSWN+MISG      
Sbjct: 437 HRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKN-VVSWNAMISGYGLHGQ 495

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNT 403
                 L+K+ML      + ST L+++ +C+    ++ G+ +     + +++  G  + T
Sbjct: 496 GAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCT 555

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVAC 445
             V+ L       G L  A  L+     ++     W  ++ AC
Sbjct: 556 CMVDLLG----RAGKLNEALELISEFPQSAIGPGVWGALLGAC 594



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 148/347 (42%), Gaps = 59/347 (17%)

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           A   ++LHGL++ +    DT V +AL  +Y +      A  VF++  + +   WN +++ 
Sbjct: 130 AAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAG 189

Query: 547 FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
              ++A    + +       P+  ++ S L A  +   +  G+ +HG+    G  E+  +
Sbjct: 190 LPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHV 249

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L+ +YS C                   A++++IS Y  +G    ++ELF E+  SG 
Sbjct: 250 VTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGW 309

Query: 652 RPTKSSVIS-----------LLSACSHSGLVDEGLQ------------------------ 676
           RP  S++++           LL+ C H+ +V   L                         
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSAC 733
            ++ MLE+       E    ++    ++G  + A   ++ ++ L +QP P    + LSAC
Sbjct: 370 IFDAMLEK-----TMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSAC 424

Query: 734 SHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDAVEI 779
           +H G   +GK V  ++ K + E NV    +L +MY   G   +A  I
Sbjct: 425 AHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSI 471


>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 748

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 190/628 (30%), Positives = 311/628 (49%), Gaps = 22/628 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           H   +  L++ Y      +++  +F     K+V  W  MI    EN      +  + +M 
Sbjct: 39  HPYVANKLMSIYIRCGRLQNTREVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMR 98

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           + G++ +  T   I+ A T    LK GR +H     AG  +D  L N  ++MYA+CG ++
Sbjct: 99  QNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMD 158

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F+GM   D ++WN ++   + +    +    F +M   G   D  +  S + A+A
Sbjct: 159 DARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANA 218

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           C G L + K +H+  ++ G E    V V  +L+ MY++ G I+ A   F  MT +++++W
Sbjct: 219 CTGALGWVKEVHSHALRAGLESD--VRVGTALVHMYARSGSIKDARLVFDKMTERNIITW 276

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-SLCADSLLLREGRSVHGYA 304
           N++I G A +G   EAF L  +MQ    + PD  T V ++ + CA +  L+  R VH  A
Sbjct: 277 NSMIGGLAQHGCGLEAFSLFRQMQ-REGLVPDAITYVNILNNACASTGALQWVRKVHDDA 335

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEM 359
            +  L +D+ + N+L+  Y+K  S+  A  +F  +    D+VSW  MI GL      +E 
Sbjct: 336 AKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVD-RDVVSWTVMIGGLAQHGFGREA 394

Query: 360 LYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L  Q        + +T L+IL    S  +LE+ K +H   +     ++    NAL+HM
Sbjct: 395 FSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHM 454

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG +  A  +  R+  + D   WN +I    QNGH +EA   F  M Q++   PD+ 
Sbjct: 455 YAKCGSIENARLVFDRME-DRDIISWNAMIGGLAQNGHGREAFSHFLEM-QREGFIPDAA 512

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV++++AC +       K +H  AL++ +  D RV +AL+  Y +C  I  A  VFE  
Sbjct: 513 TLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGM 572

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
            + ++ TWN MI   +Q+  E  A  LF  ++   F P+ I+ +SIL     +  L   K
Sbjct: 573 ASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSILGGNVSIEALEWVK 632

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC 617
           ++H H    GF  +  +SSAL+ MY+ C
Sbjct: 633 EVHRHAVRAGFDTDPRVSSALVHMYTKC 660



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 191/719 (26%), Positives = 335/719 (46%), Gaps = 55/719 (7%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  DS T + I+  + +   L   + VH   IK+ M     + N  +++Y +CG L ++ 
Sbjct: 1   ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   +  +W  ++ G   NN+ E  +  + +M  +G Q + ++  + + A     
Sbjct: 61  EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L +G+ IH      G++    + + N+LI MY++CG ++ A   F GM  +D+++WN +
Sbjct: 121 ALKWGRKIHDHIRHAGFQSD--LRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVM 178

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     +G+  EAF L  +MQ    V PD  T +++++  A +  L   + VH +A+R  
Sbjct: 179 IGRLVQHGRGHEAFSLFLQMQREGFV-PDTTTYLSMLNANACTGALGWVKEVHSHALRAG 237

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLC 363
           L  D+ +  +L+  Y++S S+  A L+F+ +   N +++WNSMI GL +     E   L 
Sbjct: 238 LESDVRVGTALVHMYARSGSIKDARLVFDKMTERN-IITWNSMIGGLAQHGCGLEAFSLF 296

Query: 364 SQFSFSTLLA--------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            Q     L+         +  +C S  +L++ + +H    K+G   +    NAL+HMY  
Sbjct: 297 RQMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAK 356

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG +  A  +   +  + D   W ++I    Q+G  +EA   F  M Q++   P+  T +
Sbjct: 357 CGSMDDARRVFYGMV-DRDVVSWTVMIGGLAQHGFGREAFSLFLQM-QREGFVPNLTTYL 414

Query: 476 NVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           +++   ++ G LE     K +H  A+ + +    RV NALI MY +C  I++A  VF+  
Sbjct: 415 SILNGKASTGALEWV---KEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRM 471

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
            + ++ +WN MI   +QN     A   F  ++   F P+  ++VSIL+AC     L   K
Sbjct: 472 EDRDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVK 531

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           ++H H    G + +  + SAL+  Y+ C               +    W+ MI     HG
Sbjct: 532 EVHSHALEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHG 591

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-----YDVRP 689
           +  EA  LF +M + G  P   + +S+L       +  E L++   +        +D  P
Sbjct: 592 REHEAFSLFLQMQDVGFVPDAITYLSILGG----NVSIEALEWVKEVHRHAVRAGFDTDP 647

Query: 690 ETEHHVCIVDMLGRSGKLQEA-YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
                  +V M  + G +  A   F  N+        WG +L AC +HGD +M    AE
Sbjct: 648 RVSS--ALVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHGDVEMAVPTAE 704



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/541 (28%), Positives = 272/541 (50%), Gaps = 19/541 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  Y+     + +  +F    ++D++TWN MI   V++         F
Sbjct: 136 GFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLF 195

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG   D+TT L +++A      L   + VH  +++AG+ +D  +    V+MYA+ 
Sbjct: 196 LQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARS 255

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  M   + ++WN+++ G   +    +    FR+M   G   D ++  + +
Sbjct: 256 GSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNIL 315

Query: 182 -AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A A  G L + + +H    K+G +    V V N+L+ MY++CG ++ A R F+GM  +
Sbjct: 316 NNACASTGALQWVRKVHDDAAKVGLDFD--VRVGNALVHMYAKCGSMDDARRVFYGMVDR 373

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW  +I G A +G   EAF L  +MQ    V P++ T +++++  A +  L   + V
Sbjct: 374 DVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFV-PNLTTYLSILNGKASTGALEWVKEV 432

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H +A+   L   L + N+L+  Y+K  S+  A L+F+ +    D++SWN+MI GL     
Sbjct: 433 HTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMED-RDIISWNAMIGGLAQNGH 491

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F EM         +TL++IL +C S  +L+  K +H   L+ G  ++    +A
Sbjct: 492 GREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSA 551

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+H Y  CG +  A  + + ++ + D   WN++I    Q+G   EA   F  M Q     
Sbjct: 552 LVHTYAKCGRIDDARLVFEGMA-SRDIITWNVMIGGLAQHGREHEAFSLFLQM-QDVGFV 609

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD++T ++++    ++E     K +H  A+++    D RV +AL+ MY +C DI +A   
Sbjct: 610 PDAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDPRVSSALVHMYTKCGDIDNAKLH 669

Query: 529 F 529
           F
Sbjct: 670 F 670



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 233/475 (49%), Gaps = 18/475 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   T+L+  Y+     + +  +F +   ++++TWN+MI    ++ C +     F
Sbjct: 237 GLESDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLF 296

Query: 62  GEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M  EG+  D+ T + I+ +A      L+  R VH  + K G+  D  + N  V+MYAK
Sbjct: 297 RQMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAK 356

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ +   F GM   D VSW  ++ G   + +  +    F +M   G   +  +  S 
Sbjct: 357 CGSMDDARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSI 416

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   A  G L + K +H   +    E   ++ V N+LI MY++CG IE A   F  M  +
Sbjct: 417 LNGKASTGALEWVKEVHTHAVNA--ELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDR 474

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D++SWNA+I G A NG   EAF    EMQ      PD AT+V++++ CA +  L   + V
Sbjct: 475 DIISWNAMIGGLAQNGHGREAFSHFLEMQ-REGFIPDAATLVSILNACASTRALDRVKEV 533

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H +A+   L  DL + ++L+  Y+K   +  A L+F  +A   D+++WN MI GL     
Sbjct: 534 HSHALEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMAS-RDIITWNVMIGGLAQHGR 592

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                  F +M  +       T L+IL    S E+LE+ K +H   ++ GF  +    +A
Sbjct: 593 EHEAFSLFLQMQDVGFVPDAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDPRVSSA 652

Query: 409 LMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           L+HMY  CGD+  A       +  + D + W  ++ AC  +G  + A+ T +  T
Sbjct: 653 LVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHGDVEMAVPTAEGGT 707


>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
          Length = 697

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 179/600 (29%), Positives = 298/600 (49%), Gaps = 35/600 (5%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL-MR 272
           T+S +      G +  A + F  M  +D+ SW AI+ G+    K EEA  L   M++   
Sbjct: 31  THSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPL 90

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            V  D   +   +  C  S  +  G S+H YA +  L   + + ++L+D Y +   + K+
Sbjct: 91  GVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKS 150

Query: 333 ELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQFSFSTL------LAI-LPSCN 379
             +F A  P  + V+W + I+GL      ++ + Y      F  L       AI L +C 
Sbjct: 151 CRVF-AEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACA 209

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
               +++G+ IH   +  GF+      N+L  MY  CG++     L + +S   D   W 
Sbjct: 210 DLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSER-DVVLWT 268

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I A  + G  ++A+ TF  M   Q  SP+  T  +  +AC +L     G+ LHG    
Sbjct: 269 SLITAYIRIGQEEKAVNTFLLMRNSQ-VSPNEQTFASTFAACASLSRLVWGEQLHGNVFS 327

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             +G    V N+++ MY  C  + SAS +F+     ++ +W+ +I  +SQ        + 
Sbjct: 328 LGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKY 387

Query: 560 F---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F   R    +P + ++ S+LS    + VL  G+Q+H    +LG ++N  I SAL++MYS 
Sbjct: 388 FSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSK 447

Query: 617 CKSN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C S                 + ++MI+ Y  HGK  EAI+LF +      RP   + IS+
Sbjct: 448 CGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISV 507

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L+ACSHSG +D G QY+N M E Y++RP  EH+ C+VD+L R+G+L +A + I  +P + 
Sbjct: 508 LTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKK 567

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW  +L AC   GD + G++ A+ + +L+P +    ++L+N++ + G WK+A  + K
Sbjct: 568 DDVVWTTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRK 627



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 163/633 (25%), Positives = 280/633 (44%), Gaps = 54/633 (8%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS--GEQADNVSLSS 179
           G L  +   F  M   D  SW  IM G +    PE+ L+ F  M     G   D   LS 
Sbjct: 42  GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+ A      ++YG+ +HA   K     S +V   ++L+ MY + G I+ + R F  M  
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVG--SALLDMYMRIGKIDKSCRVFAEMPF 159

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ V+W A I G    G   E      +M   + +  D       +  CAD   ++ GR 
Sbjct: 160 RNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGRE 219

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE- 358
           +H + I +     L + NSL   Y++   +     LF +++   D+V W S+I+   +  
Sbjct: 220 IHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSE-RDVVLWTSLITAYIRIG 278

Query: 359 ---------MLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                    +L   SQ S +  T  +   +C S   L +G+ +H     LG  ++    N
Sbjct: 279 QEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSN 338

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           ++M MY  C  L +A  L Q +    D   W+ +I   +Q    +E  K F  M +Q   
Sbjct: 339 SMMKMYSTCAKLDSASVLFQGM-RCRDIISWSTIIGGYSQAAFGEECFKYFSWM-RQAGP 396

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P    L +++S  G + +  +G+ +H LAL   +  +  +++ALI MY +C  I  AS 
Sbjct: 397 QPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASK 456

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGV 584
           VFE     ++ +   MI+ ++++     A++LF     L F P++++ +S+L+AC+  G 
Sbjct: 457 VFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQ 516

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           L  G Q     F+L  QEN          Y+   +   +  M+      G+  +A ++ +
Sbjct: 517 LDLGFQ----YFNL-MQEN----------YNMRPAKEHYGCMVDLLCRAGRLNDAEKMIN 561

Query: 645 EMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPET-EHHVCIVDM 700
           EM      P K   +   +LL AC   G V+ G +    +LE   + P +    V + ++
Sbjct: 562 EM------PWKKDDVVWTTLLRACKEKGDVERGRRAAQRILE---LDPTSFTTLVTLANI 612

Query: 701 LGRSGKLQEAYEFIKNLP---IQPKPGVWGAML 730
              +G  +EA    K++    +  +PG W ++L
Sbjct: 613 HSSTGNWKEAANVRKDMKSKGVIKEPG-WSSIL 644



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 225/500 (45%), Gaps = 19/500 (3%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            L+ +   ++LL  Y  +   + S  +F E   ++ VTW A IT  V       GL +F 
Sbjct: 127 LLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFS 186

Query: 63  EMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           +M   + +  D+    I + A   +  +K GR +H   I  G  A   + N    MY +C
Sbjct: 187 QMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTEC 246

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++      F  M   D V W ++++  +     EK +  F  M  S    +  + +S  
Sbjct: 247 GEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTF 306

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA A L  L +G+ +H     LG  DS  +SV+NS++ MYS C  +++A   F GM C+D
Sbjct: 307 AACASLSRLVWGEQLHGNVFSLGLGDS--LSVSNSMMKMYSTCAKLDSASVLFQGMRCRD 364

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SW+ II G++     EE F     M+       D A + +L+S+     +L +GR VH
Sbjct: 365 IISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFA-LASLLSVSGIMAVLEQGRQVH 423

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             A+   L  +  + ++L++ YSK  S+ +A  +F       D+VS  +MI+G       
Sbjct: 424 ALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEE-KDRTDIVSLTAMINGYAEHGKC 482

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
                LF++ L L  +    T +++L +C+    L+ G +  +  Q              
Sbjct: 483 EEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEHYGC 542

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ +    G L  A  ++  +    D   W  ++ AC + G  +   +  + + +    S
Sbjct: 543 MVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELDPTS 602

Query: 469 PDS-VTLVNVISACGNLELA 487
             + VTL N+ S+ GN + A
Sbjct: 603 FTTLVTLANIHSSTGNWKEA 622



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 229/481 (47%), Gaps = 28/481 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE--GIRFDSTTLLIIVSALTQM 86
           +F +   +D+ +W A++   V        L  F  M  +  G+  D+  L + + A  Q 
Sbjct: 50  VFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQS 109

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           + +  G  +H  + K  +++   + +  ++MY + G ++ S   F+ M   ++V+W   +
Sbjct: 110 SNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFI 169

Query: 147 SGCLHNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +G +H     + L YF +M  +    +D  + + A+ A A L ++ YG+ IH   I  G+
Sbjct: 170 TGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKGF 229

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
             +  + V NSL +MY++CG+++   R F  M+ +DVV W ++I  +   G+ E+A   +
Sbjct: 230 --AAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKA---V 284

Query: 266 HEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +   LMR+  V P+  T  +  + CA    L  G  +HG      LG  L + NS+M  Y
Sbjct: 285 NTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMY 344

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           S    L  A +LF  +    D++SW+++I G             F  M     Q +   L
Sbjct: 345 STCAKLDSASVLFQGMR-CRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFAL 403

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            ++L        LE G+ +H   L LG   N    +AL++MY  CG ++ A  + +    
Sbjct: 404 ASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEE-KD 462

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
            +D      +I    ++G  +EAI  F+  + + +  PD VT ++V++AC   G L+L F
Sbjct: 463 RTDIVSLTAMINGYAEHGKCEEAIDLFEK-SLKLSFRPDDVTFISVLTACSHSGQLDLGF 521

Query: 489 E 489
           +
Sbjct: 522 Q 522



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 177/358 (49%), Gaps = 14/358 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF A L  + SL T Y+     +  L LF     +DVV W ++ITA +        ++ 
Sbjct: 227 KGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNT 286

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M    +  +  T     +A   ++ L  G  +H      G+    S+ N  + MY+ 
Sbjct: 287 FLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYST 346

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  L+S+   F GM C D +SW+TI+ G     + E+C  YF  M  +G Q  + +L+S 
Sbjct: 347 CAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASL 406

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++ S  +  L  G+ +HAL + LG E +P  ++ ++LI+MYS+CG I  A + F      
Sbjct: 407 LSVSGIMAVLEQGRQVHALALYLGLEQNP--TIRSALINMYSKCGSIIEASKVFEEKDRT 464

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VS  A+I+G+A +GK EEA DL  E  L  S  PD  T +++++ C+ S     G+  
Sbjct: 465 DIVSLTAMINGYAEHGKCEEAIDLF-EKSLKLSFRPDDVTFISVLTACSHS-----GQLD 518

Query: 301 HGYAIRRLLGYDLLMMNS------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            G+    L+  +  M  +      ++D   ++  L+ AE + N +    D V W +++
Sbjct: 519 LGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLL 576


>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 205/690 (29%), Positives = 348/690 (50%), Gaps = 58/690 (8%)

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREM--GWSGEQADNVSLSSAVAASACLGELSYGKVI 196
           TV WN+++ G + NN P + LL + +M    S    D  + SS + A A   ++  GK I
Sbjct: 80  TVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAI 139

Query: 197 HA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           H+  L         P   V NSL++MY+ C   E A   F  M  ++VV+WN +I  F  
Sbjct: 140 HSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVK 198

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-YAIRRLLG--- 310
             ++ +A +    M + +SV P   T V L    +    L + R+V   Y   R  G   
Sbjct: 199 MNRYPQAVEAFANM-INQSVMPSPVTFVNLFPALSK---LGDSRTVKMFYGFMRKFGDQY 254

Query: 311 -YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCS 364
             D+ +++S +  +S    +  A ++F+     N  + WN+MI    +     E + +  
Sbjct: 255 VSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEI-WNTMIVAYVQNNCPVEAIDVFI 313

Query: 365 QFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           Q   S        TLL++L + +  + ++  +  H + +K    +  I +NA+M MY  C
Sbjct: 314 QALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRC 373

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
             +  +  +  ++    D   WN +I A  QNG  +EA+     M Q+Q    DSVT   
Sbjct: 374 NHVDTSLKVFDKMLER-DAVSWNTIISAFVQNGFDEEALMLVCEM-QKQKFLIDSVTATA 431

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC- 535
           ++SA  NL   + GK  H   ++  +  +  +++ LI MY +   I++A  +FE   NC 
Sbjct: 432 LLSAASNLRNLYVGKQTHAYLIRRGIQFEG-MESYLIDMYAKSGSIRTAELLFEQ--NCS 488

Query: 536 ---NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              +  TWN +I+ ++QN    +A+ L + +  +   PN +++ SIL AC+ +G +   +
Sbjct: 489 SDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLAR 548

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           Q+HG       ++N ++ ++L D YS C               K++  +++M+  YG HG
Sbjct: 549 QLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHG 608

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G  A+ L+  M  SGIRP   + +++LSAC++SGLVDEGLQ + +M + + ++P  EH+
Sbjct: 609 MGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHY 668

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKP-GVWGAMLSACSHHGDTKMGKQVAELLFK-- 751
            C+ DMLGR G++ EAYEF+K L        +WG++L +C +HG  ++GK VA+ L    
Sbjct: 669 CCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMG 728

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++    GY++ LSN+Y   G W+    + K
Sbjct: 729 MDKRMAGYHVLLSNIYAEEGEWEKVDRVRK 758



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 233/461 (50%), Gaps = 26/461 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE--EG 68
           +S +  +S+V   + +  +F    NK+   WN MI A V+N C V  +  F + +E  EG
Sbjct: 262 SSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEG 321

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  TLL +++A++Q+  +K     H   IK+   +   + N  + MY++C  +++S 
Sbjct: 322 V-CDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSL 380

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSWNTI+S  + N + E+ L+   EM       D+V+ ++ ++A++ L 
Sbjct: 381 KVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLR 440

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC---KDVVSW 245
            L  GK  HA  I+ G +   +  + + LI MY++ G I  AE  F    C   +D  +W
Sbjct: 441 NLYVGKQTHAYLIRRGIQ---FEGMESYLIDMYAKSGSIRTAELLF-EQNCSSDRDQATW 496

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII G+  NG  E+A  LL +M L+++V P+  T+ +++  C+    +   R +HG++I
Sbjct: 497 NAIIAGYTQNGLNEKAILLLKQM-LVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSI 555

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEML 360
           RR L  ++ +  SL D YSK  ++S AE +F    P  + V++ +M+      G+ K  L
Sbjct: 556 RRFLEKNVYVGTSLTDTYSKCGAISYAENVF-LRTPEKNSVTYTTMMMCYGQHGMGKRAL 614

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG-VNALMHM 412
            L      S       T +AIL +CN    ++ G  I     K+     +I     +  M
Sbjct: 615 TLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADM 674

Query: 413 YINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQ 452
               G +V A+  ++ +  +++T   W  ++ +C  +GHF+
Sbjct: 675 LGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFE 715



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 148/578 (25%), Positives = 258/578 (44%), Gaps = 32/578 (5%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVVH 96
           V WN++I   + N      L  + +M        FD  T    + A      +  G+ +H
Sbjct: 81  VVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIH 140

Query: 97  CLSIKAGMIADSS----LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLH 151
              +++    ++     + N  +NMYA C     +   F  M   + V+WNT I+S    
Sbjct: 141 SHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKM 199

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N YP+  +  F  M         V+  +   A + LG+    K+ +    K G +    V
Sbjct: 200 NRYPQ-AVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDV 258

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V +S I M+S  G ++ A   F     K+   WN +I  +  N    EA D+   +Q +
Sbjct: 259 FVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVF--IQAL 316

Query: 272 RSVEP--DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
            S E   D  T++++++  +    ++     H + I+ L G  ++++N++M  YS+ N +
Sbjct: 317 ESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHV 376

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLL-------AILPS 377
             +  +F+ +    D VSWN++IS     G  +E L L  +      L       A+L +
Sbjct: 377 DTSLKVFDKMLE-RDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSA 435

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL-QRISHNSDTS 436
            ++  +L  GK  H + ++ G     +  + L+ MY   G +  A  L  Q  S + D +
Sbjct: 436 ASNLRNLYVGKQTHAYLIRRGIQFEGME-SYLIDMYAKSGSIRTAELLFEQNCSSDRDQA 494

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I   TQNG  ++AI   K M   QN  P++VTL +++ AC ++      + LHG 
Sbjct: 495 TWNAIIAGYTQNGLNEKAILLLKQML-VQNVIPNAVTLASILPACSSMGSMGLARQLHGF 553

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           +++  +  +  V  +L   Y +C  I  A  VF      N  T+  M+  + Q+    RA
Sbjct: 554 SIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRA 613

Query: 557 LELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQI 591
           L L+  +      P+ ++ V+ILSAC   G++  G QI
Sbjct: 614 LTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQI 651



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 170/422 (40%), Gaps = 77/422 (18%)

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-DSVTLVNVISA 480
           A  LL  +   S T  WN VI+    N    +A+  +  M    + S  D  T  + + A
Sbjct: 68  ALHLLDSLPRPS-TVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKA 126

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTR----VQNALITMYGRCRDIKSASTVFESCYNCN 536
           C   +    GK++H   L+S    +T     V N+L+ MY  C+  + A  VF+     N
Sbjct: 127 CALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRN 185

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           +  WN +I +F +     +A+E F ++      P+ ++ V++  A ++LG  R  K  +G
Sbjct: 186 VVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYG 245

Query: 594 HVFHLGFQ--ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
            +   G Q   + F+ S+ + M+S+                K+   W++MI AY  +   
Sbjct: 246 FMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCP 305

Query: 637 WEAIELFHEMCNSG--------------------------------IRPTKSSVISLLSA 664
            EAI++F +   S                                 I+    S+I +L+A
Sbjct: 306 VEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNA 365

Query: 665 -------CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
                  C+H   VD  L+ ++ MLE   V   T     I+    ++G  +EA   +  +
Sbjct: 366 VMVMYSRCNH---VDTSLKVFDKMLERDAVSWNT-----IISAFVQNGFDEEALMLVCEM 417

Query: 718 PIQP---KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
             Q          A+LSA S+  +  +GKQ    L +   +  G    L +MY   G  +
Sbjct: 418 QKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIR 477

Query: 775 DA 776
            A
Sbjct: 478 TA 479


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/537 (32%), Positives = 289/537 (53%), Gaps = 38/537 (7%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T  +L+ LCA    L  GR+VH     R +  + L   +L + Y+K    + A  +
Sbjct: 57  PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116

Query: 336 FNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS-----TLLAILPSCNSPE 382
           F+ + P+ D V+WN++++G  +        EM+    +         TL+++LP+C +  
Sbjct: 117 FDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANAR 175

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +L   +  H + ++ G         A++  Y  CGD+ AA  +   +   +  S WN +I
Sbjct: 176 ALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVS-WNAMI 234

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               QNG  +EA+  F  M ++     D V+++  + ACG L    EG  +H L ++  +
Sbjct: 235 DGYAQNGDSREALALFNRMVEEGVDVTD-VSVLAALQACGELGCLDEGMRVHELLVR--I 291

Query: 503 GLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
           GLD+ V   NALITMY +C+ +  AS VF+        +WN MI   +QN     A+ LF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             ++ E   P+  ++VS++ A   +      + IHG+   L   ++ ++ +AL+DMY+ C
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411

Query: 618 -KSNAA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
            + N A              W++MI  YG HG G  A+ELF EM + GI P +++ +S+L
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACSH+GLVDEG +Y+ +M E+Y + P  EH+  +VD+LGR+GKL EA+ FI+ +P+ P 
Sbjct: 472 SACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPG 531

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             V+GAML AC  H + ++ ++ A+ +F+L P+   Y++ L+N+Y     WKD   +
Sbjct: 532 LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARV 588



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 225/459 (49%), Gaps = 18/459 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +    +T+L   Y+       +  +F     +D V WNA++     N    M +  
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              M EE G R DS TL+ ++ A      L   R  H  +I++G+    ++    ++ Y 
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYC 207

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGD+ ++   F  M   ++VSWN ++ G   N    + L  F  M   G    +VS+ +
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+ A   LG L  G  +H L +++G + +  VSV N+LI+MYS+C  ++ A   F  +  
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSN--VSVMNALITMYSKCKRVDLASHVFDELDR 325

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +  VSWNA+I G A NG  E+A  L   MQL  +V+PD  T+V++I   AD     + R 
Sbjct: 326 RTQVSWNAMILGCAQNGCSEDAVRLFTRMQL-ENVKPDSFTLVSVIPALADISDPLQARW 384

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY+IR  L  D+ ++ +L+D Y+K   ++ A +LFN+ A    +++WN+MI G     
Sbjct: 385 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHVITWNAMIHGYGSHG 443

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGV 406
                  LF+EM  +    + +T L++L +C+    ++ G+      +   G        
Sbjct: 444 FGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHY 503

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             ++ +    G L  A++ +Q++  +   S +  ++ AC
Sbjct: 504 GTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC 542



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 228/501 (45%), Gaps = 30/501 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH      G+ +++       NMYAKC     +   F  M   D V+WN +++G
Sbjct: 75  LATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAG 134

Query: 149 CLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
              N      + +  R     GE+ D+++L S + A A    L+  +  HA  I+ G E+
Sbjct: 135 YARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEE 194

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
              V+V  +++  Y +CGDI AA   F  M  K+ VSWNA+IDG+A NG   EA  L + 
Sbjct: 195 --LVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNR 252

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   V+    +V+  +  C +   L EG  VH   +R  L  ++ +MN+L+  YSK  
Sbjct: 253 M-VEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCK 311

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
            +  A  +F+ +      VSWN+MI G            LF  M     +    TL++++
Sbjct: 312 RVDLASHVFDELDRRTQ-VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVI 370

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           P+          + IH + ++L    +   + AL+ MY  CG +  A  L    +     
Sbjct: 371 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS-ARERHV 429

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I     +G  + A++ F+ M +     P+  T ++V+SAC +  L  EG+  + 
Sbjct: 430 ITWNAMIHGYGSHGFGKAAVELFEEM-KSIGIVPNETTFLSVLSACSHAGLVDEGRE-YF 487

Query: 496 LALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK- 551
            ++K   GL+  +++   ++ + GR   +  A    +    +  L  +  M+ A   +K 
Sbjct: 488 TSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKN 547

Query: 552 ---AEVRALELFRHLEFEPNE 569
              AE  A ++F   E  P E
Sbjct: 548 VELAEESAQKIF---ELGPQE 565



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 148/329 (44%), Gaps = 37/329 (11%)

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNA 511
           A+  F +M+    A P   T  +++  C        G+++H  A  +  G+D+      A
Sbjct: 43  ALAAFVAMSSA-GAPPVLRTFTSLLKLCAARGDLATGRAVH--AQLAARGIDSEALAATA 99

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----P 567
           L  MY +CR    A  VF+     +   WN +++ +++N     A+E+   ++ E    P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           + I++VS+L AC     L   ++ H      G +E   +++A+LD Y  C          
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVF 219

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                K++ +W++MI  Y  +G   EA+ LF+ M   G+  T  SV++ L AC   G +D
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           EG++ +     E  VR   + +V +    + M  +  ++  A      L  + +   W A
Sbjct: 280 EGMRVH-----ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNA 333

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENV 757
           M+  C+ +G     +    L  +++ ENV
Sbjct: 334 MILGCAQNG---CSEDAVRLFTRMQLENV 359



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 157/351 (44%), Gaps = 17/351 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++    +L+T YS     + +  +F E   +  V+WNAMI  C +N C    +  F
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  E ++ DS TL+ ++ AL  ++   Q R +H  SI+  +  D  +    ++MYAKC
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +N +   F+       ++WN ++ G   + + +  +  F EM   G   +  +  S +
Sbjct: 412 GRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVL 471

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A +  G +  G+  +   +K  Y   P +    +++ +  + G ++ A    W    K 
Sbjct: 472 SACSHAGLVDEGRE-YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA----WAFIQKM 526

Query: 242 VVSWNAIIDGFALNG-KFEEAFDLLHE-MQLMRSVEPD-------IATVVTLISLCADSL 292
            +     + G  L   K  +  +L  E  Q +  + P        +A +    S+  D  
Sbjct: 527 PMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVA 586

Query: 293 LLREGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPM 342
            +R     +G  +++  G+ ++ + N +  FYS S +  +A+ +++ +A +
Sbjct: 587 RVRTAMEKNG--LQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 177/548 (32%), Positives = 281/548 (51%), Gaps = 37/548 (6%)

Query: 269 QLMRSVEPDIATVVTLISL---CADSLLLREGRSVHGY-AIRRLLGYDLLMMNSLMDFYS 324
           +L R   PD AT V L SL   C  +  LR GR +H    +         + N L+  YS
Sbjct: 8   RLWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYS 67

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL--LAILPS----- 377
               L+ A  LF A+ P  + VSW +++SGL + +++  +  +F+ +    + P+     
Sbjct: 68  HCADLASALRLFAAM-PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALS 126

Query: 378 -----CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
                  +  +   G  +HC  ++LGF       + L  MY  CG L  A  +  ++   
Sbjct: 127 SAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK 186

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  +I    +NG  + A+ +F+ M ++     D     +V+SA G L+  +  KS
Sbjct: 187 -DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKS 245

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNK 551
           +H    K+   L+  V+NALI MY +  D++SAS V +      N+ +   MI  + +  
Sbjct: 246 IHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETD 305

Query: 552 AEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL ++   R    EPNE +  S++  C    +L  G Q+H  V       +SF+ S
Sbjct: 306 CVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGS 365

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
            L+DMY  C               +++ AW+++I+ +  HG G EAI+ F  M  SGIRP
Sbjct: 366 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 425

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + +SLL+ACSH+GLVDEGL+Y+ +M E + + P+ EH+ CI+D  GR+G+L EAY+F
Sbjct: 426 NHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 485

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I  +PI+P    W ++L AC   G  ++G+  A+ L KLEP N G ++SLS +Y +LG+W
Sbjct: 486 ISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQW 545

Query: 774 KDAVEIGK 781
           +D   + K
Sbjct: 546 EDVKAVRK 553



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 148/582 (25%), Positives = 253/582 (43%), Gaps = 59/582 (10%)

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           + A  V L+S + +    G+L  G+++HA  + L    +    + N LI+MYS C D+ +
Sbjct: 16  DAATTVHLASLLQSCGRAGDLRRGRLLHAR-LVLSGAAAASTFLANHLITMYSHCADLAS 74

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A R F  M  ++ VSW  ++ G + N    +A      M+    V P    + +     A
Sbjct: 75  ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRA-GVAPTRFALSSAARAAA 133

Query: 290 DSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
                  G  +H   +R  LG+D  L + ++L D YSK   LS+A  +F+ + P  D V+
Sbjct: 134 ALGAPLPGAQLHCVGVR--LGFDTELFVASNLADMYSKCGLLSEACRVFDQM-PQKDAVA 190

Query: 348 WNSMISGLFKEMLYLCSQFSFSTLL-------------AILPSCNSPESLEFGKSIHCWQ 394
           W +MI G  K      +  SF  +              ++L +    +     KSIHC  
Sbjct: 191 WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 250

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF--- 451
            K GF       NAL+ MY    D+ +A  +L+      D   WN+V      +G+    
Sbjct: 251 TKAGFELEVAVRNALIDMYAKSMDVESASRVLK-----IDPGGWNVVSGTSMIDGYIETD 305

Query: 452 --QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             +EA+  +  + ++Q   P+  T  ++I  C    L  +G  LH   +K+ +  D+ V 
Sbjct: 306 CVEEALVIYVEL-RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVG 364

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---E 566
           + L+ MYG+C  I  +  +F          WN +I+ F+Q+     A++ F  + +    
Sbjct: 365 STLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIR 424

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSM 626
           PN I+ VS+L+AC+  G++  G +     +    +E   I                +S +
Sbjct: 425 PNHIAFVSLLTACSHAGLVDEGLK-----YFYSMKEAHGIEP----------KEEHYSCI 469

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I  YG  G+  EA +   EM    I+P      SLL AC   G  + G     N+++   
Sbjct: 470 IDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMK--- 523

Query: 687 VRP-ETEHHVCIVDM---LGRSGKLQEAYEFIKNLPIQPKPG 724
           + P  T  HV +  +   LG+   ++   + +++  I+  PG
Sbjct: 524 LEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPG 565



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 254/542 (46%), Gaps = 43/542 (7%)

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSS-LCNVFV 115
           ++G+ +      D+ T + + S L    +   L++GR++H   + +G  A S+ L N  +
Sbjct: 4   YWGQRLWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLI 63

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            MY+ C DL S+   F+ M   + VSW T++SG   N      L  F  M  +G      
Sbjct: 64  TMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRF 123

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +LSSA  A+A LG    G  +H +G++LG++   +V+  ++L  MYS+CG +  A R F 
Sbjct: 124 ALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVA--SNLADMYSKCGLLSEACRVFD 181

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  KD V+W A+IDG+A NG  E A     +M+    V  D     +++S       L+
Sbjct: 182 QMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGG---LK 238

Query: 296 EG---RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +G   +S+H    +     ++ + N+L+D Y+KS  +  A  +        ++VS  SMI
Sbjct: 239 DGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMI 298

Query: 353 SGLFKE-------MLYL--------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
            G  +        ++Y+         ++F+FS+++     C     LE G  +H   +K 
Sbjct: 299 DGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIK---GCAMQALLEQGAQLHAQVIKT 355

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
               ++   + L+ MY  CG +  +  L   I + +D + WN VI    Q+GH +EAI+ 
Sbjct: 356 DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQA 414

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITM 515
           F  M       P+ +  V++++AC +  L  EG   +  ++K   G++ + ++   +I  
Sbjct: 415 FDRMI-YSGIRPNHIAFVSLLTACSHAGLVDEGLK-YFYSMKEAHGIEPKEEHYSCIIDT 472

Query: 516 YGRCRDIKSA-STVFESCYNCNLCTWNCMISA----FSQNKAEVRALELFRHLEFEPNEI 570
           YGR   +  A   + E     N   W  ++ A     S+   EV A  L   ++ EP   
Sbjct: 473 YGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNL---MKLEPGNT 529

Query: 571 SI 572
            I
Sbjct: 530 GI 531



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 206/460 (44%), Gaps = 35/460 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI--- 69
           L+T YS+ +   S+L LF     ++ V+W  +++   +N      L  F  M   G+   
Sbjct: 62  LITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPT 121

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           RF  ++     +AL       Q   +HC+ ++ G   +  + +   +MY+KCG L+ +  
Sbjct: 122 RFALSSAARAAAALGAPLPGAQ---LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACR 178

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLG 188
            F  M   D V+W  ++ G   N   E  +L FR+M   G   AD     S ++AS  L 
Sbjct: 179 VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLK 238

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF------WGMTCKDV 242
           +    K IH    K G+E    V+V N+LI MY++  D+E+A R        W     +V
Sbjct: 239 DGWLSKSIHCCVTKAGFELE--VAVRNALIDMYAKSMDVESASRVLKIDPGGW-----NV 291

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VS  ++IDG+      EEA  +  E++  + VEP+  T  ++I  CA   LL +G  +H 
Sbjct: 292 VSGTSMIDGYIETDCVEEALVIYVELR-RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHA 350

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
             I+  L  D  + ++L+D Y K   +S +  LFN I    D ++WN++I+         
Sbjct: 351 QVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGR 409

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
                F  M+Y   + +    +++L +C+    ++ G K  +  +   G        + +
Sbjct: 410 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 469

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +  Y   G L  A+  +  +    +   W  ++ AC   G
Sbjct: 470 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 509



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +++L   YS       +  +F +   KD V W AMI    +N  +   +  F
Sbjct: 152 GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 211

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        +  S L+    LK G   + +HC   KAG   + ++ N  ++MY
Sbjct: 212 RDMKREGLV--GADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMY 269

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTI-----MSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           AK  D+ S+          D   WN +     + G +  +  E+ L+ + E+   G + +
Sbjct: 270 AKSMDVESASRVLK----IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 325

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             + SS +   A    L  G  +HA  IK       +V  T  L+ MY +CG I  + + 
Sbjct: 326 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST--LVDMYGKCGLISLSMQL 383

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  +  ++WNA+I+ FA +G   EA      M +   + P+    V+L++ C+ + L
Sbjct: 384 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IYSGIRPNHIAFVSLLTACSHAGL 442

Query: 294 LREGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + EG   + Y+++   G +      + ++D Y ++  L +A    + +    +   W S+
Sbjct: 443 VDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 501

Query: 352 I 352
           +
Sbjct: 502 L 502


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 201/672 (29%), Positives = 333/672 (49%), Gaps = 69/672 (10%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+ +L  A+ ++A L +    + IH   ++      P  +V+N+L++ Y++CGD++AA  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 233 AFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-- 288
            F       +D VS+N++I    L  ++  A D L +M  +   E    T+V+++  C  
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDM--LADHEVSSFTLVSVLLACSH 164

Query: 289 -ADSLLLREGRSVHGYAIRRLL---GYDLLMMNSLMDFYSKSNSLSKAE-LLFNAIAPMN 343
            AD    R GR  H +A++      G +    N+L+  Y++   +  A+ L F++ A + 
Sbjct: 165 LADQGH-RLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVG 223

Query: 344 DLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           DLV+WN+MIS L +            +M+ L  +    T  + LP+C+  E L  G+ +H
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVH 283

Query: 392 CWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNG 449
            + LK    + N+   +AL+ MY +   +  A  +   +  H      WN +I    Q+G
Sbjct: 284 AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343

Query: 450 HF-QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLALKSLMGLDTR 507
              +EAI+ F  M  +   +P   T+  V+ AC   E+ F GK ++HG  +K  M  +  
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEV-FTGKEAVHGYVVKRDMASNRF 402

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           VQNAL+ MY R   +  A T+F      ++ +WN +I+          A +L R ++   
Sbjct: 403 VQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPS 462

Query: 567 ----------------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                                 PN I+++++L  C  L     GK+IHG+      + + 
Sbjct: 463 SAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDL 522

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + SAL+DMY+ C               ++   W+ +I AYG HG G EA+ LF  M  +
Sbjct: 523 AVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVAN 582

Query: 650 G-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           G   P + + I+ L+ACSHSGLVD GL+ +  M  +Y   P    H C+VD+LGR+G+L 
Sbjct: 583 GEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLD 642

Query: 709 EAYEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           EAY  I ++ P + +   W  ML AC  H + K+G+  AE LF+LEP+   +Y+ L N+Y
Sbjct: 643 EAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIY 702

Query: 768 VALGRWKDAVEI 779
            A G W+++ E+
Sbjct: 703 SAAGLWENSTEV 714



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 280/611 (45%), Gaps = 71/611 (11%)

Query: 90  KQGRVVHCLSIKAGMI--ADSSLCNVFVNMYAKCG--DLNSSECTFSGMHCADTVSWNTI 145
           +  R +H  S++  ++     ++ N  +  YA+CG  D   +    +     D VS+N++
Sbjct: 65  RSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSL 124

Query: 146 MSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY--GKVIHALGIK 202
           +S  CL   +    L   R+M  +  +  + +L S + A + L +  +  G+  HA  +K
Sbjct: 125 ISALCLFRRW-GHALDALRDM-LADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALK 182

Query: 203 LGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFW--GMTCKDVVSWNAIIDGFALNGKFE 259
            G+ D        N+L+SMY++ G ++ A+R F+  G    D+V+WN +I      G+ E
Sbjct: 183 HGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCE 242

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNS 318
           EA  +L++M  +  V PD  T  + +  C+   LL  GR VH + ++   L  +  + ++
Sbjct: 243 EAVQVLYDMVAL-GVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASA 301

Query: 319 LMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMI------SGLFKEMLYLCSQF----- 366
           L+D Y+ +  +S A  +F+ +      L  WN+MI       G+ +E + L S+      
Sbjct: 302 LVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAG 361

Query: 367 ---SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              S +T+  +LP+C   E     +++H + +K   ++N    NALM MY   G +  A 
Sbjct: 362 CAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAH 421

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--------------- 468
           ++   I    D   WN +I  C   G   EA +  + M    +A+               
Sbjct: 422 TIFAMIDLR-DIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDG 480

Query: 469 ----PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
               P+++TL+ ++  C  L     GK +HG A++  +  D  V +AL+ MY +C  +  
Sbjct: 481 QRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLAL 540

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACT 580
           A  VF+     N+ TWN +I A+  +     AL LF  +    E  PNE++ ++ L+AC+
Sbjct: 541 ARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACS 600

Query: 581 QLGVLRHGKQI-HGHVFHLGFQENSFISSALLD-----------------MYSNCKSNAA 622
             G++  G ++  G     GF+   ++ + ++D                 M       +A
Sbjct: 601 HSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSA 660

Query: 623 WSSMISAYGYH 633
           WS+M+ A   H
Sbjct: 661 WSTMLGACRLH 671



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 284/628 (45%), Gaps = 67/628 (10%)

Query: 1   RGFLAHLPT---STSLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVV 55
           R  L H PT   S +LLTAY+     +++LALF  T    +D V++N++I+A    R   
Sbjct: 76  RRALLHRPTPAVSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWG 135

Query: 56  MGLHFFGEMV--EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI---ADSSL 110
             L    +M+   E   F   ++L+  S L      + GR  H  ++K G +    +   
Sbjct: 136 HALDALRDMLADHEVSSFTLVSVLLACSHLADQG-HRLGREAHAFALKHGFLDKGRERFP 194

Query: 111 CNVFVNMYAKCGDLNSSECTF--SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS 168
            N  ++MYA+ G ++ ++  F  SG    D V+WNT++S  +     E+ +    +M   
Sbjct: 195 FNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVAL 254

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGD 226
           G + D V+ +SA+ A + L  L  G+ +HA  +K   +D    +  V ++L+ MY+    
Sbjct: 255 GVRPDGVTFASALPACSRLELLGVGREVHAFVLK---DDDLAANSFVASALVDMYASNEQ 311

Query: 227 IEAAERAFWGMT--CKDVVSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVT 283
           +  A R F  +    + +  WNA+I G+A +G   EEA +L   M+      P   T+  
Sbjct: 312 VSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAG 371

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           ++  CA S +     +VHGY ++R +  +  + N+LMD Y++   + +A  +F A+  + 
Sbjct: 372 VLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIF-AMIDLR 430

Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFS---------------------------TL 371
           D+VSWN++I+     GL  E   L  +                               TL
Sbjct: 431 DIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITL 490

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           + +LP C    +   GK IH + ++    ++    +AL+ MY  CG L  A ++  R+  
Sbjct: 491 MTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +   WN++I+A   +G   EA+  F  M     A+P+ VT +  ++AC +  L   G 
Sbjct: 551 R-NVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGL 609

Query: 492 SLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISAF 547
            L    +K   G +    +   ++ + GR   +  A  +  S       +  W+ M+ A 
Sbjct: 610 ELFQ-GMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGAC 668

Query: 548 SQNK----AEVRALELFRHLEFEPNEIS 571
             ++      + A  LF   E EP+E S
Sbjct: 669 RLHRNVKLGRIAAERLF---ELEPDEAS 693



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 232/524 (44%), Gaps = 45/524 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK--DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +LL+ Y+ +   + +  LF+ +     D+VTWN MI+  V+       +    +MV  G+
Sbjct: 197 ALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGV 256

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAKCGDLNSSE 128
           R D  T    + A +++  L  GR VH   +K   + A+S + +  V+MYA    ++ + 
Sbjct: 257 RPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHAR 316

Query: 129 CTFSGM--HCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
             F  +  H      WN ++ G   H    E+ +  F  M      A + +  + V  + 
Sbjct: 317 RVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPAC 376

Query: 186 CLGELSYGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
              E+  GK  +H   +K     + +V   N+L+ MY++ G ++ A   F  +  +D+VS
Sbjct: 377 ARSEVFTGKEAVHGYVVKRDMASNRFVQ--NALMDMYARLGRMDEAHTIFAMIDLRDIVS 434

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-------------------PDIATVVTLI 285
           WN +I G  + G   EAF L+ EMQL  S                     P+  T++TL+
Sbjct: 435 WNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLL 494

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
             CA       G+ +HGYA+R  L  DL + ++L+D Y+K   L+ A  +F+ + P  ++
Sbjct: 495 PGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL-PRRNV 553

Query: 346 VSWNSMI-----SGLFKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSI-H 391
           ++WN +I      GL  E L L  +   +        T +A L +C+    ++ G  +  
Sbjct: 554 ITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQ 613

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGH 450
             +   GF         ++ +    G L  A+ ++  ++      S W+ ++ AC  + +
Sbjct: 614 GMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRN 673

Query: 451 FQEA-IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            +   I   +    + + +   V L N+ SA G  E + E + +
Sbjct: 674 VKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGM 717


>gi|302768433|ref|XP_002967636.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
 gi|300164374|gb|EFJ30983.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
          Length = 747

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 190/712 (26%), Positives = 357/712 (50%), Gaps = 44/712 (6%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           SAL     + +G+ +H   + AG+   + + N  + MY + G +  ++  F  +   + +
Sbjct: 20  SALKNCTEVSEGKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEKVFEKNHI 79

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW   ++    N + ++ L  F++M   G +   ++    + A     + + G+ +HA  
Sbjct: 80  SWTLFIAALAQNGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEGRKVHARV 139

Query: 201 IKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           +    ED+   S   ++ +LI+MY +CG ++ AE  F  +  KD  SW ++I  +  + +
Sbjct: 140 L----EDAVLASDVFLSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEE 195

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLM 315
           F+ A ++  E  L+   +PD +T   ++  C   +   L +GR VH   +   LG +L +
Sbjct: 196 FDLALEIYMEF-LVEGGKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLAL 254

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS- 369
           +N L+  Y  S    +A  L + + P  D V WN+M++ L      ++ L L ++ S   
Sbjct: 255 VNRLVYLYGSSGCFEEAMDLLDRMNPPED-VPWNAMVAALSQRGKNRQALELFNRTSLEG 313

Query: 370 ------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                 T ++ + +C+     + G++IH   L+ GF ++ +    L++MY  CG+L  A 
Sbjct: 314 VKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQAR 373

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +L+    N+  SC +++   C Q+G  + A+  F  + +Q     + VTLV+V++A  +
Sbjct: 374 RMLEASGWNNLVSCTSLIWAYC-QHGLLENALDVFHRV-EQGGIKANKVTLVSVVAAFWS 431

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
            +    G+++H   ++     D  V NALI MYG+C  +  A  +F +    N  +WN +
Sbjct: 432 SDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSI 491

Query: 544 ISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I A SQ      AL+LF  ++     P  I++ ++L AC ++  L  GK IH  +     
Sbjct: 492 IGACSQQGDGKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSML 551

Query: 601 QENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHE 645
           + +  + S+LL+MY+ C S                  W+SMI+AY  H +  ++++L   
Sbjct: 552 EHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRR 611

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G++  + + ++++ ACSH+G V++G  Y+ +M  E  + P  E + C+VD+L R+G
Sbjct: 612 MEMEGVKFNEVTFLTVIFACSHAGFVEQGCHYFVSMTRERGMTPSLEQYSCVVDLLARAG 671

Query: 706 KLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
            +++A +FI + + + P    W A+L+AC  H D +    VAE + +L P N
Sbjct: 672 WIEQALDFIERRMHLPPNAATWIALLNACKIHHDLQRAVMVAERIIELSPGN 723



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/594 (26%), Positives = 284/594 (47%), Gaps = 24/594 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L  Y  +   E +   F +   K+ ++W   I A  +N      L  F +M  EG++  
Sbjct: 53  VLEMYGRLGSVEEAQEAFEKVFEKNHISWTLFIAALAQNGHCKEALATFKKMDLEGVKPK 112

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTF 131
               L ++ A        +GR VH   ++  ++A D  L    +NMY KCG L+ +E  F
Sbjct: 113 RLAFLRVIGACCDARDATEGRKVHARVLEDAVLASDVFLSAALINMYGKCGCLDKAEMVF 172

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE-- 189
             +   D  SW +++   + +   +  L  + E    G + D  +  + + A   L E  
Sbjct: 173 GSIASKDDFSWTSMIRAYVEHEEFDLALEIYMEFLVEGGKPDASTFKNILRACTRLEEKS 232

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+++H+  ++ G   +  +++ N L+ +Y   G  E A      M   + V WNA++
Sbjct: 233 LPQGRLVHSQILESGLGSN--LALVNRLVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMV 290

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
              +  GK  +A +L +   L   V+P   T V+ I  C+D    ++GR++H  A+    
Sbjct: 291 AALSQRGKNRQALELFNRTSL-EGVKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGF 349

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCS 364
           G D ++   L++ Y K  +L +A  +  A +  N+LVS  S+I      GL +  L +  
Sbjct: 350 GSDEVVTGCLINMYGKCGNLEQARRMLEA-SGWNNLVSCTSLIWAYCQHGLLENALDVFH 408

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           TL++++ +  S + L+ G+++H   ++LG S++ I  NAL+ MY  CG
Sbjct: 409 RVEQGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCG 468

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A  +       +  S WN +I AC+Q G  + A+  F  M     +SP ++TL NV
Sbjct: 469 SLPDAKMIFANARRKNAVS-WNSIIGACSQQGDGKSALDLFARM-DLSGSSPTTITLANV 526

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC  +     GK +H     S++  D  V+++L+ MY +C  +  A  +F+   +  +
Sbjct: 527 LEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQSSCV 586

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHG 588
            TW  MI+A++++     +L+L R +E E    NE++ ++++ AC+  G +  G
Sbjct: 587 VTWTSMIAAYAKHARFEDSLKLGRRMEMEGVKFNEVTFLTVIFACSHAGFVEQG 640



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 273/595 (45%), Gaps = 27/595 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S +L+  Y      + +  +F    +KD  +W +MI A VE+    + L  + E + EG 
Sbjct: 152 SAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALEIYMEFLVEGG 211

Query: 70  RFDSTTLLIIVSALTQM--NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           + D++T   I+ A T++    L QGR+VH   +++G+ ++ +L N  V +Y   G    +
Sbjct: 212 KPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYLYGSSGCFEEA 271

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
                 M+  + V WN +++         + L  F      G +   V+  S + A +  
Sbjct: 272 MDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGVKPSGVTFVSGIDACSDG 331

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+   G+ IHA  ++ G+       VT  LI+MY +CG++E A R        ++VS  +
Sbjct: 332 GDEQQGRAIHARALEAGFGSDEV--VTGCLINMYGKCGNLEQARRMLEASGWNNLVSCTS 389

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +  +G  E A D+ H ++    ++ +  T+V++++    S  L  GR++H   I  
Sbjct: 390 LIWAYCQHGLLENALDVFHRVE-QGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARLIEL 448

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D+++ N+L+  Y K  SL  A+++F A A   + VSWNS+I              L
Sbjct: 449 GHSSDVIVTNALIGMYGKCGSLPDAKMIF-ANARRKNAVSWNSIIGACSQQGDGKSALDL 507

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  M    S  +  TL  +L +C     L  GK IH         ++    ++L++MY  
Sbjct: 508 FARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSSLLNMYTK 567

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG LV A  + QR   +S    W  +I A  ++  F++++K  + M + +    + VT +
Sbjct: 568 CGSLVDAEKIFQRW-QSSCVVTWTSMIAAYAKHARFEDSLKLGRRM-EMEGVKFNEVTFL 625

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCY 533
            VI AC +     +G   + +++    G+   ++  + ++ +  R   I+ A    E   
Sbjct: 626 TVIFACSHAGFVEQG-CHYFVSMTRERGMTPSLEQYSCVVDLLARAGWIEQALDFIERRM 684

Query: 534 NC--NLCTWNCMISAFSQNKAEVRALELF-RHLEFEPNEISIVSIL-SACTQLGV 584
           +   N  TW  +++A   +    RA+ +  R +E  P   S  S+L   C + G+
Sbjct: 685 HLPPNAATWIALLNACKIHHDLQRAVMVAERIIELSPGNSSACSLLQDVCNEAGI 739



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 206/468 (44%), Gaps = 18/468 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  ++L     L+  Y +   FE ++ L       + V WNAM+ A  +       L  F
Sbjct: 247 GLGSNLALVNRLVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELF 306

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                EG++    T +  + A +     +QGR +H  +++AG  +D  +    +NMY KC
Sbjct: 307 NRTSLEGVKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKC 366

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L  +          + VS  +++     +   E  L  F  +   G +A+ V+L S V
Sbjct: 367 GNLEQARRMLEASGWNNLVSCTSLIWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVV 426

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA      L  G+ +HA  I+LG+  S  V VTN+LI MY +CG +  A+  F     K+
Sbjct: 427 AAFWSSDFLDRGRAMHARLIELGH--SSDVIVTNALIGMYGKCGSLPDAKMIFANARRKN 484

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN+II   +  G  + A DL   M L  S  P   T+  ++  C     L  G+ +H
Sbjct: 485 AVSWNSIIGACSQQGDGKSALDLFARMDLSGS-SPTTITLANVLEACVRINDLPRGKVIH 543

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
                 +L +D  + +SL++ Y+K  SL  AE +F      + +V+W SMI+   K   +
Sbjct: 544 LEIRGSMLEHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQS-SCVVTWTSMIAAYAKHARF 602

Query: 362 LCS------------QFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNA 408
             S            +F+  T L ++ +C+    +E G         + G + +    + 
Sbjct: 603 EDSLKLGRRMEMEGVKFNEVTFLTVIFACSHAGFVEQGCHYFVSMTRERGMTPSLEQYSC 662

Query: 409 LMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAI 455
           ++ +    G +  A   ++R  H   + + W  ++ AC  +   Q A+
Sbjct: 663 VVDLLARAGWIEQALDFIERRMHLPPNAATWIALLNACKIHHDLQRAV 710


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 193/630 (30%), Positives = 312/630 (49%), Gaps = 47/630 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+ +H   I+ G   S  +   N L++ Y++CG +  A   F  + CKDVVSWN++I
Sbjct: 30  LVAGRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLRE--GRSVHGYAI 305
            G++ NG    ++ ++   + MR+ +  P+  T+  +    A+S L     GR  H   +
Sbjct: 88  TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK--AESSLQSSTVGRQAHALVV 145

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML 360
           +     D+ +  SL+  Y K+  +     +F A  P  +  +W++M+SG       +E +
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF-AYMPERNTYTWSTMVSGYATRGRVEEAI 204

Query: 361 YLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            + + F         S     A+L S  +   +  G+ IHC  +K G        NAL+ 
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  L  A  +    S + ++  W+ ++   +QNG   EA+K F  M       P  
Sbjct: 265 MYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA-GIKPSE 322

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVF 529
            T+V V++AC ++    EGK LH   LK  +G +  +    AL+ MY +   +  A   F
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLK--LGFERHLFATTALVDMYAKAGCLADARKGF 380

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
           +     ++  W  +IS + QN     AL L+R ++     PN+ ++ S+L AC+ L  L 
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GKQ+HGH    GF     I SAL  MYS C               K   +W++MIS   
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 500

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
           ++G+G EA+ELF EM   G+ P   + ++++SACSH G V+ G  Y+N M ++  + P+ 
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C+VD+L R+G+L+EA EFI++  I     +W  +LSAC +HG  ++G    E L  
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMA 620

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L       Y+ LS +Y ALGR +D   + K
Sbjct: 621 LGSRESSTYVQLSGIYTALGRMRDVERVWK 650



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 161/539 (29%), Positives = 265/539 (49%), Gaps = 32/539 (5%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           ++TLL  ++  +Q   L  GR VH   I+ G        NV VN YAKCG L  +   F+
Sbjct: 14  TSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFN 73

Query: 133 GMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            + C D VSWN++++G   N   +     +  FREM       +  +L+    A + L  
Sbjct: 74  AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 133

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            + G+  HAL +K+      YV    SL+ MY + G +E   + F  M  ++  +W+ ++
Sbjct: 134 STVGRQAHALVVKMSSFGDIYVD--TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT-LISLCADSLLLREGRSVHGYAIRR- 307
            G+A  G+ EEA  + +     +    D   V T ++S  A ++ +  GR +H   I+  
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
           LLG+ + + N+L+  YSK  SL++A  +F++    N  ++W++M++G            L
Sbjct: 252 LLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNS-ITWSAMVTGYSQNGESLEAVKL 309

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  M     + S  T++ +L +C+    LE GK +H + LKLGF  +     AL+ MY  
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369

Query: 416 CG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
            G   D    F  LQ      D + W  +I    QN   +EA+  ++ M +     P+  
Sbjct: 370 AGCLADARKGFDCLQE----RDVALWTSLISGYVQNSDNEEALILYRRM-KTAGIIPNDP 424

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T+ +V+ AC +L     GK +HG  +K   GL+  + +AL TMY +C  ++  + VF   
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
            N ++ +WN MIS  S N     ALELF  +     EP++++ V+I+SAC+  G +  G
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 167/609 (27%), Positives = 289/609 (47%), Gaps = 37/609 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG---LHFFGEMVEEGI 69
           L+  Y+       + ++F     KDVV+WN++IT   +N  +      +  F EM  + I
Sbjct: 55  LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             ++ TL  I  A + +     GR  H L +K     D  +    V MY K G +     
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCL----LYFREMGWSGEQADNV--SLSSAVAA 183
            F+ M   +T +W+T++SG       E+ +    L+ RE    G  +D V  ++ S++AA
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE-EGSDSDYVFTAVLSSLAA 233

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
           +  +G    G+ IH + IK G     +V+++N+L++MYS+C  +  A + F     ++ +
Sbjct: 234 TIYVG---LGRQIHCITIKNGL--LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W+A++ G++ NG+  EA  L   M     ++P   T+V +++ C+D   L EG+ +H +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF 347

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----E 358
            ++      L    +L+D Y+K+  L+ A   F+ +    D+  W S+ISG  +     E
Sbjct: 348 LLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE-RDVALWTSLISGYVQNSDNEE 406

Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            L L  +   +       T+ ++L +C+S  +LE GK +H   +K GF       +AL  
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L    +L+ R + N D   WN +I   + NG   EA++ F+ M   +   PD 
Sbjct: 467 MYSKCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML-AEGMEPDD 524

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF 529
           VT VN+ISAC +      G     + +   +GLD +V +   ++ +  R   +K A    
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNM-MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI 583

Query: 530 ESC-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILSAC-TQLGVLR 586
           ES   +  LC W  ++SA  +  K E+      + +     E S    LS   T LG +R
Sbjct: 584 ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643

Query: 587 HGKQIHGHV 595
             +++  H+
Sbjct: 644 DVERVWKHM 652



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 253/535 (47%), Gaps = 48/535 (8%)

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           +H       + P  +T++  ++  +    L  GR+VHG  IR      +   N L++FY+
Sbjct: 1   MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG---------------LFKEMLYLCSQFSFS 369
           K   L+KA  +FNAI    D+VSWNS+I+G               LF+EM       +  
Sbjct: 61  KCGKLAKAHSIFNAII-CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLL 426
           TL  I  + +S +S   G+  H   +K+    +     +L+ MY   G   D +  F+ +
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLE 485
                  +T  W+ ++      G  +EAIK F    +++    DS      V+S+     
Sbjct: 180 PE----RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235

Query: 486 LAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               G+ +H + +K+ L+G    + NAL+TMY +C  +  A  +F+S  + N  TW+ M+
Sbjct: 236 YVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           + +SQN   + A++LF  +     +P+E +IV +L+AC+ +  L  GKQ+H  +  LGF+
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            + F ++AL+DMY+                 +  A W+S+IS Y  +    EA+ L+  M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
             +GI P   ++ S+L ACS    ++ G Q + + + ++    E      +  M  + G 
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGS 473

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGY 759
           L++     +  P +     W AM+S  SH+G      ++ E +    +EP++V +
Sbjct: 474 LEDGNLVFRRTPNKDVVS-WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 223/498 (44%), Gaps = 34/498 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV---EE 67
           TSL+  Y      E  L +F     ++  TW+ M++       V   +  F   +   EE
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D      ++S+L     +  GR +HC++IK G++   +L N  V MY+KC  LN +
Sbjct: 217 GSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEA 275

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F      ++++W+ +++G   N    + +  F  M  +G +    ++   + A + +
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  GK +H+  +KLG+E   ++  T +L+ MY++ G +  A + F  +  +DV  W +
Sbjct: 336 CYLEEGKQLHSFLLKLGFE--RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  N   EEA  L   M+    + P+  T+ +++  C+    L  G+ VHG+ I+ 
Sbjct: 394 LISGYVQNSDNEEALILYRRMK-TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
             G ++ + ++L   YSK  SL    L+F    P  D+VSWN+MISG            L
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRR-TPNKDVVSWNAMISGLSHNGQGDEALEL 511

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI- 414
           F+EML    +    T + I+ +C+    +E G     W       ++ IG++  +  Y  
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERG-----W-FYFNMMSDQIGLDPKVDHYAC 565

Query: 415 ------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNA 467
                   G L  A   ++  + +     W I++ AC  +G  +  +    K M      
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRE 625

Query: 468 SPDSVTLVNVISACGNLE 485
           S   V L  + +A G + 
Sbjct: 626 SSTYVQLSGIYTALGRMR 643



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +  S +L+T YS       +  +F  + +++ +TW+AM+T   +N   +  +  F
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI+    T++ +++A + +  L++G+ +H   +K G           V+MYAK 
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   D   W +++SG + N+  E+ L+ +R M  +G   ++ +++S +
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK +H   IK G+     V + ++L +MYS+CG +E     F     KD
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           VVSWNA+I G + NG+ +EA +L  EM L   +EPD  T V +IS C+    +  G
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNIISACSHKGFVERG 543



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 61/374 (16%)

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRC 519
           T Q   +P + TL+  ++          G+++HG  +++  G  T +Q  N L+  Y +C
Sbjct: 5   TFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRT--GASTCIQHANVLVNFYAKC 62

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFE---PNEISIV 573
             +  A ++F +    ++ +WN +I+ +SQN    +    ++LFR +  +   PN  ++ 
Sbjct: 63  GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
            I  A + L     G+Q H  V  +    + ++ ++L+ MY                  +
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS-----SVISLLSACSHSGLVDE 673
           +   WS+M+S Y   G+  EAI++F+         + S     +V+S L+A  + GL  +
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242

Query: 674 -----------GLQYYNNMLEEYDVRPETEHHVC----------------IVDMLGRSGK 706
                      G    +N L     + E+ +  C                +V    ++G+
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302

Query: 707 LQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE-NVGYYIS 762
             EA +    +    I+P       +L+ACS     + GKQ+   L KL  E ++    +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362

Query: 763 LSNMYVALGRWKDA 776
           L +MY   G   DA
Sbjct: 363 LVDMYAKAGCLADA 376


>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
 gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 582

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 195/575 (33%), Positives = 292/575 (50%), Gaps = 43/575 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +D V WNA+I G++ NG   +A+ L   M L +   P   T+V L+  C     + +
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQ 59

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           GRSVHG A +  L  D  + N+L+ FYSK   L  AE+LF  +      VSWN+MI    
Sbjct: 60  GRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYS 118

Query: 353 -SGL-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
            SGL       FK M     + S  T++ +L +  S E L      HC  +K G  N+  
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQ 463
            V +L+  Y  CG LV+A  L    S   D+      IV+C  + G    A+  F S T+
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYF-SKTR 229

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           Q     D+V LV ++  C        G SLHG A+KS +   T V N LITMY +  D++
Sbjct: 230 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVE 289

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSAC 579
           +   +FE      L +WN +IS   Q+     A E+F  +       P+ I+I S+L+ C
Sbjct: 290 TVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 349

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWS 624
           +QL  L  GK++HG+     F+  +F+ +AL+DMY+ C +                A W+
Sbjct: 350 SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWN 409

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           SMIS Y   G    A+  + EM   G++P + + + +LSAC+H G VDEG   +  M++E
Sbjct: 410 SMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKE 469

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           + + P  +H+  +V +LGR+    EA   I  + I+P   VWGA+LSAC  H + ++G+ 
Sbjct: 470 FGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEY 529

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           VA  +F L+ +N G Y+ +SN+Y     W D V +
Sbjct: 530 VARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRV 564



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 25/469 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D V WNA+I     N         F  M+++G    +TTL+ ++    Q   + QGR V
Sbjct: 4   RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H ++ K+G+  DS + N  ++ Y+KC +L S+E  F  M    TVSWNT++     +   
Sbjct: 64  HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 123

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E+ +  F+ M        NV +S     +     +S+ + +H L +K G  +   +SV  
Sbjct: 124 EEAITVFKNM-----FEKNVEISPVTIINLLSAHVSH-EPLHCLVVKCGMVND--ISVVT 175

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+  YS+CG + +AER +       +V   +I+  +A  G  + A     + + +  ++
Sbjct: 176 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL-CMK 234

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D   +V ++  C  S  +  G S+HGYAI+  L    L++N L+  YSK + +     L
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS-TLLAILPSCNSPE 382
           F  +     L+SWNS+ISG            +F +M+        + T+ ++L  C+   
Sbjct: 295 FEQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK +H + L+  F N      AL+ MY  CG+ V A S+ + I     T+ WN +I
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC-TATWNSMI 412

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
              + +G    A+  +  M +++   PD +T + V+SAC +     EGK
Sbjct: 413 SGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGVLSACNHGGFVDEGK 460



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 203/448 (45%), Gaps = 24/448 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ YS  +   S+  LF E  +K  V+WN MI A  ++      +  F  M E+ +  
Sbjct: 81  ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 140

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T++ ++SA      L      HCL +K GM+ D S+    V  Y++CG L S+E  +
Sbjct: 141 SPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 194

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +       V   +I+S        +  ++YF +      + D V+L   +        + 
Sbjct: 195 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 254

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   IK G        V N LI+MYS+  D+E     F  +    ++SWN++I G
Sbjct: 255 IGMSLHGYAIKSGL--CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 312

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G+   AF++ H+M L   + PD  T+ +L++ C+    L  G+ +HGY +R     
Sbjct: 313 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 372

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISGL------------FKE 358
           +  +  +L+D Y+K  +  +AE +F +I AP     +WNSMISG             + E
Sbjct: 373 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT--ATWNSMISGYSLSGLQHRALSCYLE 430

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T L +L +CN    ++ GK      +K    + T+   ALM   +    
Sbjct: 431 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 490

Query: 419 LVA-AFSLLQRISHNSDTSCWNIVIVAC 445
           L   A  L+ ++    D++ W  ++ AC
Sbjct: 491 LFTEALYLIWKMDIKPDSAVWGALLSAC 518



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 4/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   TSL+ AYS      S+  L+       +V   ++++   E   + + + +F
Sbjct: 166 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 225

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +  +  ++ D+  L+ I+    + + +  G  +H  +IK+G+   + + N  + MY+K 
Sbjct: 226 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 285

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
            D+ +    F  +     +SWN+++SGC+ +         F +M  +G    D ++++S 
Sbjct: 286 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 345

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +A  + L  L+ GK +H   ++  +E+  +  V  +LI MY++CG+   AE  F  +   
Sbjct: 346 LAGCSQLCCLNLGKELHGYTLRNNFENENF--VCTALIDMYAKCGNEVQAESVFKSIKAP 403

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
              +WN++I G++L+G    A     EM+  + ++PD  T + ++S C     + EG+
Sbjct: 404 CTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHGGFVDEGK 460


>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
 gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
 gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
 gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
          Length = 748

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 209/729 (28%), Positives = 356/729 (48%), Gaps = 63/729 (8%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K G +A +   N  +  YA+ G L+S+   F  M   + VSW  ++S    N  P     
Sbjct: 17  KLGTLAHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFR 76

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI-----HALGIKLGYEDSPYVSVTN 215
           +F  M  SG   +  SL++ + A   +   S  K++     H + ++ G + +P+V   +
Sbjct: 77  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVG--S 134

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD---LLHEMQLMR 272
           SL+ MY++ G I AA+RAF  +  KD+  WNA+++G+ LNG    A     L+H   L  
Sbjct: 135 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGL-- 192

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              PD  T ++ +  C+ S     GR +H   I  +L  +  +MNSL+D Y ++     A
Sbjct: 193 --APDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETA 250

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKE----MLYLC-----------SQFSFSTLLAILPS 377
             +F  I    D VSWN+MISG   +     ++ C           ++ +FS LL +   
Sbjct: 251 ASVFRKI-RQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRL--- 306

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
             + E+   G  I     + G+++N +  NA+++M   CG L  A+     ++ +++   
Sbjct: 307 SGAKENESLGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLT-STNIVT 365

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I       H +E +K F+S+       PD  T   V+SA    + A + + +H   
Sbjct: 366 WNEMIAGYGLFSHSEETMKLFRSLVCF-GERPDEFTYSAVLSAFQEAQGARDHEQIHATI 424

Query: 498 LK----SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ---N 550
           LK    S   + T +  A +  +G    ++ +  + E      L +W  +ISAF +   N
Sbjct: 425 LKQGFASCQFVSTSLIKANVAAFG---SVQISLKIIEDAGKMELVSWGVVISAFLKHGLN 481

Query: 551 KAEVRALELFR-HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              +    LFR     +P+E  + ++L+AC    ++RH + IH  V   G  ++  ++SA
Sbjct: 482 DEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSKHFCVASA 541

Query: 610 LLDMYSNCKSNAA-----------------WSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           ++D Y+ C    +                 +++M++AY  HG   EA+ L+ EM  + + 
Sbjct: 542 VVDAYAKCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLS 601

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           PT ++ +++LSACSH GLV++G   ++ ML  Y + P   ++ C+VD+L R G L EA  
Sbjct: 602 PTPATFVAILSACSHLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKG 661

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I  +P QP P VW +++  C  HG+ ++G   AE + ++ P + G YISLSN+Y   G 
Sbjct: 662 VIDAMPFQPWPAVWRSLVIGCRIHGNKQLGVLAAEQILRMAPSSDGAYISLSNVYADDGE 721

Query: 773 WKDAVEIGK 781
           W+ A E  +
Sbjct: 722 WQSAEETRR 730



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 228/500 (45%), Gaps = 28/500 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SLL  Y+      ++   F    NKD+  WNAM+   V N      +     M   G+ 
Sbjct: 134 SSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLA 193

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T +  V A +       GR +HCL I + + +++S+ N  V+MY +     ++   
Sbjct: 194 PDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 253

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DTVSWNT++SG  H+   +       +M   G + + V+ S  +  S      
Sbjct: 254 FRKIRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENE 313

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S G  I AL  + GY D+  V V N++I+M S+CG +  A   F  +T  ++V+WN +I 
Sbjct: 314 SLGLQIVALAYRHGYTDN--VLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIA 371

Query: 251 GFALNGKFEEAFDLLHEMQLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           G+ L    EE       M+L RS+      PD  T   ++S   ++   R+   +H   +
Sbjct: 372 GYGLFSHSEET------MKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATIL 425

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEML 360
           ++       +  SL+     +    +  L     A   +LVSW  +IS     GL  E++
Sbjct: 426 KQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVI 485

Query: 361 YLCSQFSFST--------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +L + F   +        L  +L +C +   +   + IH   LK G S +    +A++  
Sbjct: 486 FLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSKHFCVASAVVDA 545

Query: 413 YINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG++ +A S    +S  +D +  +N ++ A   +G   EA+  ++ MT+ +  SP  
Sbjct: 546 YAKCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAK-LSPTP 604

Query: 472 VTLVNVISACGNLELAFEGK 491
            T V ++SAC +L L  +GK
Sbjct: 605 ATFVAILSACSHLGLVEQGK 624


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 165/515 (32%), Positives = 273/515 (53%), Gaps = 38/515 (7%)

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           R +H   +   L +   ++  L+   S    ++ A  +F+ + P   +  WN++I G   
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDL-PRPQVFPWNAIIRGYSR 96

Query: 356 ---FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
              F++ L + S+   +       T   +L +C     L+ G+ +H    +LGF  +   
Sbjct: 97  NNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFV 156

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            N L+ +Y  C  L  A ++ + +     T   W  ++ A  QNG   EA++ F  M ++
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQM-RK 215

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDI 522
            +  PD V LV+V++A   L+   +G+S+H   +K  MGL+T      +L TMY +C  +
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK--MGLETEPDLLISLNTMYAKCGQV 273

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
            +A  +F+   + NL  WN MIS +++N     A++LF  +   +  P+ ISI S +SAC
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISAC 333

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
            Q+G L   + +  +V    ++++ FISSAL+DM++ C               +    WS
Sbjct: 334 AQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWS 393

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           +MI  YG HG+  EAI L+  M   G+ P   + + LL AC+HSG+V EG  ++N M  +
Sbjct: 394 AMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-AD 452

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           + + P+ +H+ CI+D+LGR+G L +AYE IK +P+QP   VWGA+LSAC  H   ++GK 
Sbjct: 453 HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKY 512

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            A+ LF ++P N G+Y+ LSN+Y A   W    E+
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 28/461 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L+ A S+      +  +F +     V  WNA+I     N      L  + +M    + 
Sbjct: 57  TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS T   ++ A   ++ L+ GR VH    + G  AD  + N  + +YAKC  L  +   
Sbjct: 117 PDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTV 176

Query: 131 FSGMHCADT--VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F G+   +   VSW  I+S    N  P + L  F +M     + D V+L S + A  CL 
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQ 236

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ IHA  +K+G E  P + +  SL +MY++CG +  A+  F  M   +++ WNA+
Sbjct: 237 DLEQGRSIHASVMKMGLETEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A NG  ++A DL HEM + + V PD  ++ + IS CA    L + R +  Y  R  
Sbjct: 295 ISGYAKNGFAKDAIDLFHEM-INKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSD 353

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              D+ + ++L+D ++K  S+  A  +F+      D+V W++MI G            L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVECARSVFDRTLD-RDVVVWSAMIVGYGLHGQAREAISLY 412

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-----LMH 411
           + M       +  T L +L +CN    +  G     W      +++ I         ++ 
Sbjct: 413 RAMERDGVHPNDVTFLGLLIACNHSGMVREG-----WWFFNRMADHKINPQQQHYACIID 467

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           +    G L  A+ +++ +      + W  ++ AC ++ H +
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 221/476 (46%), Gaps = 21/476 (4%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           Q R +H   +  G+     L    ++  +  GD+  +   F  +       WN I+ G  
Sbjct: 36  QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            NN+ +  LL + +M  +    D+ +    + A   L  L  G+ +HA   +LG+E    
Sbjct: 96  RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEAD-- 153

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           V V N LI++Y++C  +  A   F G+    + +VSW AI+  +A NG+  EA ++  +M
Sbjct: 154 VFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQM 213

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           + M  V+PD   +V++++       L +GRS+H   ++  L  +  ++ SL   Y+K   
Sbjct: 214 RKM-DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQ 272

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           ++ A++LF+ +   N L+ WN+MISG            LF EM+    +    ++ + + 
Sbjct: 273 VATAKILFDKMKSPN-LILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAIS 331

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C    SLE  + +  +  +  + ++    +AL+ M+  CG +  A S+  R + + D  
Sbjct: 332 ACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDR-TLDRDVV 390

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W+ +IV    +G  +EAI  +++M ++    P+ VT + ++ AC +  +  EG      
Sbjct: 391 VWSAMIVGYGLHGQAREAISLYRAM-ERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNR 449

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK 551
                +    +    +I + GR   +  A  V +       +  W  ++SA  +++
Sbjct: 450 MADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 177/378 (46%), Gaps = 5/378 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A +     L+  Y+       +  +F       + +V+W A+++A  +N   V  L 
Sbjct: 149 GFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALE 208

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F +M +  ++ D   L+ +++A T +  L+QGR +H   +K G+  +  L      MYA
Sbjct: 209 IFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYA 268

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG + +++  F  M   + + WN ++SG   N + +  +  F EM     + D +S++S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITS 328

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A++A A +G L   + +     +  Y D  ++S  ++LI M+++CG +E A   F     
Sbjct: 329 AISACAQVGSLEQARWMDEYVSRSDYRDDVFIS--SALIDMFAKCGSVECARSVFDRTLD 386

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DVV W+A+I G+ L+G+  EA  L   M+    V P+  T + L+  C  S ++REG  
Sbjct: 387 RDVVVWSAMIVGYGLHGQAREAISLYRAME-RDGVHPNDVTFLGLLIACNHSGMVREGWW 445

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
                    +         ++D   ++  L +A  +   +     +  W +++S   K  
Sbjct: 446 FFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505

Query: 360 LYLCSQFSFSTLLAILPS 377
                +++   L +I PS
Sbjct: 506 HVELGKYAAQQLFSIDPS 523


>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
          Length = 583

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 195/575 (33%), Positives = 292/575 (50%), Gaps = 43/575 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +D V WNA+I G++ NG   +A+ L   M L +   P   T+V L+  C     + +
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQ 59

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           GRSVHG A +  L  D  + N+L+ FYSK   L  AE+LF  +      VSWN+MI    
Sbjct: 60  GRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYS 118

Query: 353 -SGL-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
            SGL       FK M     + S  T++ +L +  S E L      HC  +K G  N+  
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDIS 172

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQ 463
            V +L+  Y  CG LV+A  L    S   D+      IV+C  + G    A+  F S T+
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYF-SKTR 229

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           Q     D+V LV ++  C        G SLHG A+KS +   T V N LITMY +  D++
Sbjct: 230 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVE 289

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSAC 579
           +   +FE      L +WN +IS   Q+     A E+F  +       P+ I+I S+L+ C
Sbjct: 290 TVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 349

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWS 624
           +QL  L  GK++HG+     F+  +F+ +AL+DMY+ C +                A W+
Sbjct: 350 SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWN 409

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           SMIS Y   G    A+  + EM   G++P + + + +LSAC+H G VDEG   +  M++E
Sbjct: 410 SMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKE 469

Query: 685 YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           + + P  +H+  +V +LGR+    EA   I  + I+P   VWGA+LSAC  H + ++G+ 
Sbjct: 470 FGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEY 529

Query: 745 VAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           VA  +F L+ +N G Y+ +SN+Y     W D V +
Sbjct: 530 VARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRV 564



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 224/469 (47%), Gaps = 25/469 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D V WNA+I     N         F  M+++G    +TTL+ ++    Q   + QGR V
Sbjct: 4   RDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSV 63

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H ++ K+G+  DS + N  ++ Y+KC +L S+E  F  M    TVSWNT++     +   
Sbjct: 64  HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQ 123

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E+ +  F+ M        NV +S     +     +S+ + +H L +K G  +   +SV  
Sbjct: 124 EEAITVFKNM-----FEKNVEISPVTIINLLSAHVSH-EPLHCLVVKCGMVND--ISVVT 175

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+  YS+CG + +AER +       +V   +I+  +A  G  + A     + + +  ++
Sbjct: 176 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL-CMK 234

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D   +V ++  C  S  +  G S+HGYAI+  L    L++N L+  YSK + +     L
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS-TLLAILPSCNSPE 382
           F  +     L+SWNS+ISG            +F +M+        + T+ ++L  C+   
Sbjct: 295 FEQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK +H + L+  F N      AL+ MY  CG+ V A S+ + I     T+ WN +I
Sbjct: 354 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC-TATWNSMI 412

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
              + +G    A+  +  M +++   PD +T + V+SAC +     EGK
Sbjct: 413 SGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGVLSACNHGGFVDEGK 460



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 203/448 (45%), Gaps = 24/448 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ YS  +   S+  LF E  +K  V+WN MI A  ++      +  F  M E+ +  
Sbjct: 81  ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 140

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T++ ++SA      L      HCL +K GM+ D S+    V  Y++CG L S+E  +
Sbjct: 141 SPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 194

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           +       V   +I+S        +  ++YF +      + D V+L   +        + 
Sbjct: 195 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 254

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   IK G        V N LI+MYS+  D+E     F  +    ++SWN++I G
Sbjct: 255 IGMSLHGYAIKSGL--CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 312

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G+   AF++ H+M L   + PD  T+ +L++ C+    L  G+ +HGY +R     
Sbjct: 313 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 372

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISGL------------FKE 358
           +  +  +L+D Y+K  +  +AE +F +I AP     +WNSMISG             + E
Sbjct: 373 ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT--ATWNSMISGYSLSGLQHRALSCYLE 430

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +    T L +L +CN    ++ GK      +K    + T+   ALM   +    
Sbjct: 431 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 490

Query: 419 LVA-AFSLLQRISHNSDTSCWNIVIVAC 445
           L   A  L+ ++    D++ W  ++ AC
Sbjct: 491 LFTEALYLIWKMDIKPDSAVWGALLSAC 518



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 4/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +   TSL+ AYS      S+  L+       +V   ++++   E   + + + +F
Sbjct: 166 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 225

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +  +  ++ D+  L+ I+    + + +  G  +H  +IK+G+   + + N  + MY+K 
Sbjct: 226 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 285

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
            D+ +    F  +     +SWN+++SGC+ +         F +M  +G    D ++++S 
Sbjct: 286 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 345

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +A  + L  L+ GK +H   ++  +E+  +  V  +LI MY++CG+   AE  F  +   
Sbjct: 346 LAGCSQLCCLNLGKELHGYTLRNNFENENF--VCTALIDMYAKCGNEVQAESVFKSIKAP 403

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
              +WN++I G++L+G    A     EM+  + ++PD  T + ++S C     + EG+
Sbjct: 404 CTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHGGFVDEGK 460


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/535 (31%), Positives = 282/535 (52%), Gaps = 33/535 (6%)

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +L R +  D    V ++  C     L   + VH   I+  +  +  +MN+L+  Y +   
Sbjct: 19  RLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGR 78

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L +A  +F+A+   +   SWN+MI+G            LF+EM +   Q +  T + IL 
Sbjct: 79  LQEARCVFDALVKKSG-ASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILK 137

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C S  +L++GK +H      G  ++     AL+ MY  CG +  A  +   +  N D  
Sbjct: 138 ACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM-NHDII 196

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W ++I A  Q+G+ +EA +    M +Q+   P+++T V++++AC +       K +H  
Sbjct: 197 SWTVMIGAYAQSGNGKEAYRLMLQM-EQEGFKPNAITYVSILNACASEGALKWVKRVHRH 255

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           AL + + LD RV  AL+ MY +   I  A  VF+     ++ +WN MI AF+++     A
Sbjct: 256 ALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEA 315

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
            +LF  ++ E   P+ I  +SIL+AC   G L   K+IH H    G + +  + +AL+ M
Sbjct: 316 YDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHM 375

Query: 614 YSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS                 ++  +W++MIS    HG G +A+E+F  M   G++P + + 
Sbjct: 376 YSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTF 435

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +++LSACSH+GLVDEG   Y  M + Y + P+  H  C+VD+LGR+G+L EA  FI N+ 
Sbjct: 436 VAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMA 495

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           + P    WGA+L +C  +G+ ++G+ VA+   KL+P+N   Y+ LSN+Y   G+W
Sbjct: 496 VDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKW 550



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 255/529 (48%), Gaps = 23/529 (4%)

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           ++ G+  DS   + ++    +   L   + VH   IK+ M  ++ + N  +++Y +CG L
Sbjct: 20  LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             + C F  +      SWN +++G + + + E  +  FREM   G Q +  +    + A 
Sbjct: 80  QEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKAC 139

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L  L +GK +HA     G E    V V  +L+ MY +CG I  A R F  +   D++S
Sbjct: 140 ASLSALKWGKEVHACIRHGGLESD--VRVGTALLRMYGKCGSINEARRIFDNLMNHDIIS 197

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  +I  +A +G  +EA+ L+ +M+     +P+  T V++++ CA    L+  + VH +A
Sbjct: 198 WTVMIGAYAQSGNGKEAYRLMLQME-QEGFKPNAITYVSILNACASEGALKWVKRVHRHA 256

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           +   L  D+ +  +L+  Y+KS S+  A ++F+ +  + D+VSWN MI            
Sbjct: 257 LDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM-KVRDVVSWNVMIGAFAEHGRGHEA 315

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF +M     +      L+IL +C S  +LE+ K IH   L  G   +     AL+HM
Sbjct: 316 YDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHM 375

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G +  A  +  R+   +  S WN +I    Q+G  Q+A++ F+ MT      PD V
Sbjct: 376 YSKSGSIDDARVVFDRMKVRNVVS-WNAMISGLAQHGLGQDALEVFRRMT-AHGVKPDRV 433

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFE 530
           T V V+SAC +  L  EG+S + LA+  + G++  V   N ++ + GR   +  A    +
Sbjct: 434 TFVAVLSACSHAGLVDEGRSQY-LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFID 492

Query: 531 S-CYNCNLCTWNCMI-SAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
           +   + +  TW  ++ S  +    E+  L     L+ +P   +   +LS
Sbjct: 493 NMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLS 541



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 255/544 (46%), Gaps = 29/544 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y      + +  +F     K   +WNAMI   VE++     +  F EM  EG++ 
Sbjct: 68  NLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           ++ T +II+ A   ++ LK G+ VH      G+ +D  +    + MY KCG +N +   F
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D +SW  ++     +   ++      +M   G + + ++  S + A A  G L 
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           + K +H   +  G E    V V  +L+ MY++ G I+ A   F  M  +DVVSWN +I  
Sbjct: 248 WVKRVHRHALDAGLELD--VRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA +G+  EA+DL  +MQ     +PD    +++++ CA +  L   + +H +A+   L  
Sbjct: 306 FAEHGRGHEAYDLFLQMQ-TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
           D+ +  +L+  YSKS S+  A ++F+ +   N +VSWN+MISGL            F+ M
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRN-VVSWNAMISGLAQHGLGQDALEVFRRM 423

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGD 418
                +    T +A+L +C+    ++ G+S +    ++ G   +    N ++ +    G 
Sbjct: 424 TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGR 483

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ--EAIKTFKSMTQQQNASPDSVTLVN 476
           L+ A   +  ++ + D + W  ++ +C   G+ +  E +   +     +NA+   V L N
Sbjct: 484 LMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAAT-YVLLSN 542

Query: 477 VISACGNLELA------FEGKSLHGLALKSLMGLDTRVQNALI--TMYGRCRDI-KSAST 527
           + +  G  ++          + +     +S + +D ++ + L+  + +  C++I +S   
Sbjct: 543 IYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDK 602

Query: 528 VFES 531
           V E 
Sbjct: 603 VIEK 606



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 195/431 (45%), Gaps = 32/431 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   T+LL  Y        +  +F    N D+++W  MI A  ++          
Sbjct: 159 GLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLM 218

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +EG + ++ T + I++A      LK  + VH  ++ AG+  D  +    V MYAK 
Sbjct: 219 LQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKS 278

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F  M   D VSWN ++     +    +    F +M   G + D +   S +
Sbjct: 279 GSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSIL 338

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A  G L + K IH   +  G E    V V  +L+ MYS+ G I+ A   F  M  ++
Sbjct: 339 NACASAGALEWVKKIHRHALDSGLEVD--VRVGTALVHMYSKSGSIDDARVVFDRMKVRN 396

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWNA+I G A +G  ++A ++   M     V+PD  T V ++S C+ + L+ EGRS +
Sbjct: 397 VVSWNAMISGLAQHGLGQDALEVFRRMT-AHGVKPDRVTFVAVLSACSHAGLVDEGRSQY 455

Query: 302 GYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
             A+ ++ G   D+   N ++D   ++  L +A+L  + +A   D  +W           
Sbjct: 456 -LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWG---------- 504

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG-- 417
                        A+L SC +  ++E G+ +   +LKL   N    V  L ++Y   G  
Sbjct: 505 -------------ALLGSCRTYGNVELGELVAKERLKLDPKNAATYV-LLSNIYAEAGKW 550

Query: 418 DLVAAFSLLQR 428
           D+V+    + R
Sbjct: 551 DMVSWVRTMMR 561


>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 230/855 (26%), Positives = 392/855 (45%), Gaps = 93/855 (10%)

Query: 13   LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
            ++T ++     E +  LF     ++VV+W+ MI         V  +  F  M+ EGI   
Sbjct: 161  VITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPS 220

Query: 73   STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              T+L +V AL+ +  +  G  +H    K G++ D  + N  +++YAK G + +S   F 
Sbjct: 221  EITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFD 280

Query: 133  GM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M    + VSW +I+SG   +    K +  F +M  +G + + ++  S + A +  G + 
Sbjct: 281  EMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVE 340

Query: 192  YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIID 250
             G V     +   Y  +P V     +I M  + G +  AE+       + +   W  ++ 
Sbjct: 341  QG-VAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLG 399

Query: 251  GFALNGKFEEAFDLLHE-MQLMRSVEPD---IATVVTLISLCADSLLLR----EGRSVHG 302
              +  G+ E     + + + L R    D   ++ ++T +   +D+ ++R    +  SV  
Sbjct: 400  CCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKS 459

Query: 303  Y-------AIRRLLGYDLL---------MMNSLMDFYSKSNSLSKAELLFNAI-APMNDL 345
            +       AI+RL  Y ++         M   L  +      L  A  +F+ I AP   L
Sbjct: 460  FFNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFL 519

Query: 346  VSWNSMISGLFKE-------MLYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIHCW 393
              WN +I GL +          Y  +Q         T   IL +C    +L  G+ +H  
Sbjct: 520  --WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNH 577

Query: 394  QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
              KLG  ++    N+L+H+Y  CG+L  A S+   +    D   WN +I   +Q   F++
Sbjct: 578  ITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV-VKDVVSWNSLICGYSQCNRFKD 636

Query: 454  AIKTFKSMTQQQNASPDSVTLVNVISACGNL--------------ELAFEGKSLHGLALK 499
             +  FK M Q +    D VT++ V+SAC  L              +   E     G  L 
Sbjct: 637  ILALFKLM-QNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLV 695

Query: 500  SLMGLDTRVQ-----------------NALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
               G   ++Q                 NA+I  Y + +DI SA  +F+     +L +W+ 
Sbjct: 696  DYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSS 755

Query: 543  MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
            MIS +SQ      ALE+FR ++    +P+ I I S++S+C  LG L  GK +H +V    
Sbjct: 756  MISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNN 815

Query: 600  FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
             + ++ + ++L+DMY  C               K   +W+S+I     +G   E++ LF 
Sbjct: 816  IKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQ 875

Query: 645  EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
             M   G RP   + + +L AC+++ LV+EGL ++ +M   Y + P+ +H+ C+VD+LGR+
Sbjct: 876  AMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRA 935

Query: 705  GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
            G+L++A  FI  +PI P P VW  +L +C+ HGD  + + V + L +LEP N G Y  LS
Sbjct: 936  GQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLS 995

Query: 765  NMYVALGRWKDAVEI 779
            N Y +  RW +A+ +
Sbjct: 996  NAYASAHRWSEAMNV 1010



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 211/408 (51%), Gaps = 55/408 (13%)

Query: 427 QRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           Q I+H   +   + W+ ++ A +   H Q+A++ F+    + +A+ D+      + AC  
Sbjct: 44  QLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRH--ARWHAADDTYAFTFALKACAG 101

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR----------------------- 520
           L        LHGL ++      T V  AL+ +Y  C                        
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVV 161

Query: 521 --------DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNE 569
                   +++ A  +FE     N+ +W+ MI  +++    V A+ LFR +  E   P+E
Sbjct: 162 ITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
           I++++++ A + +G +  G+ +HG+    G   +  + ++L+D+Y+              
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDE 281

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               ++  +W+S+IS +  HG   +A+ELF +M  +GIRP + + +S+L ACSH GLV++
Sbjct: 282 MLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQ 341

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G+ ++ +M+ EY++ P+ +H  CI+DMLGR+G+L+EA + I++ P++    VW  +L  C
Sbjct: 342 GVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCC 401

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           S +G+ +MG++  + +  LE E  G ++ LSNM   L R+ DA  + K
Sbjct: 402 SKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRK 449



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 181/828 (21%), Positives = 353/828 (42%), Gaps = 109/828 (13%)

Query: 8   PTS-TSLLTAYSNVSYFESSLALFYET---CNKDVVTWNAMITACVE---NRCVVMGLHF 60
           PT   +LL AYS+  + + +L LF         D   +   + AC      RC  M LH 
Sbjct: 55  PTPWHALLKAYSHGPHPQDALQLFRHARWHAADDTYAFTFALKACAGLGWPRCC-MQLH- 112

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            G +V +G  F +     +V+      CL   R    ++ +   + ++   NV +  +A 
Sbjct: 113 -GLVVRKGFEFQTYVHTALVNVYILCGCLADSR----MAFEEMPVKNAVSWNVVITGFAG 167

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G++  +   F  M C + VSW+ ++ G      P + +  FR M   G     +++ + 
Sbjct: 168 WGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAV 227

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TC 239
           V A + +G++  G+ +H    K G      V V NSLI +Y++ G I+ + R F  M   
Sbjct: 228 VPALSNVGKILIGEALHGYCEKEGLVWD--VRVGNSLIDLYAKIGSIQNSLRVFDEMLDR 285

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +++VSW +II GFA++G   +A +L  +M+    + P+  T ++++  C+   L+ +G +
Sbjct: 286 RNLVSWTSIISGFAMHGLSVKAVELFADMRRA-GIRPNRITFLSVLHACSHGGLVEQGVA 344

Query: 300 VHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------ 352
                I    +  D+     ++D   ++  L +AE +        +   W +++      
Sbjct: 345 FFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKY 404

Query: 353 ------SGLFKEMLYLCSQFS-----FSTLLAILPSCNSPE------------------- 382
                     K++L L  +F       S +L  L   +  E                   
Sbjct: 405 GEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIV 464

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMY-INCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +E  K +H + +  G  N    ++ ++  Y I   DLV A  +  +I   + T  WNI+
Sbjct: 465 RMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPT-TFLWNIL 523

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    Q+    +AI  +K   Q     PD++T   ++ AC  +    EG+ +H    K  
Sbjct: 524 IRGLAQSDAPADAIAFYKK-AQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLG 582

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  V N+LI +Y  C ++  A +VF+     ++ +WN +I  +SQ       L LF+
Sbjct: 583 LLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFK 642

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-- 616
            ++ E    ++++++ ++SACT+LG       +  ++     + + ++ + L+D +    
Sbjct: 643 LMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRG 702

Query: 617 --------------------------------------------CKSNAAWSSMISAYGY 632
                                                        K   +WSSMIS Y  
Sbjct: 703 QLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQ 762

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
                +A+E+F +M  + ++P    + S++S+C+H G +D G ++ +  +   +++ +T 
Sbjct: 763 ANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLG-KWVHEYVRRNNIKADTI 821

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
               ++DM  + G  +EA +  K +  +     W +++   +++G  K
Sbjct: 822 MENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSIIIGLANNGFEK 868



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 182/387 (47%), Gaps = 43/387 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LH 59
           G L+ +  S SL+  Y+       + ++F E   KDVV+WN++I  C  ++C      L 
Sbjct: 582 GLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLI--CGYSQCNRFKDILA 639

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG----RVVHCLSIKAGMIADSSLCN--- 112
            F  M  EG++ D  T++ +VSA T++          R +    I+  +   ++L +   
Sbjct: 640 LFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFG 699

Query: 113 ----------VFVNM--------------YAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
                     VF NM              YAK  D+ S+   F  +   D +SW++++SG
Sbjct: 700 RRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISG 759

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
               N+    L  FR+M  +  + D + ++S V++ A LG L  GK +H    +   +  
Sbjct: 760 YSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKAD 819

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             +   NSLI MY +CG  + A + F  M  KD +SWN+II G A NG  +E+ +L   M
Sbjct: 820 TIME--NSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAM 877

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS--LMDFYSKS 326
            L     P+  T + ++  CA++ L+ EG   H  +++RL   +  M +   ++D   ++
Sbjct: 878 -LTEGFRPNGVTFLGVLIACANAKLVEEGLD-HFESMKRLYSLEPQMKHYGCVVDLLGRA 935

Query: 327 NSLSKAELLFNAIAPMN-DLVSWNSMI 352
             L KA L F    P++ D V W  ++
Sbjct: 936 GQLEKA-LRFITEMPIDPDPVVWRILL 961


>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
 gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
          Length = 597

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 299/601 (49%), Gaps = 53/601 (8%)

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G+  S YVS  N ++ MY +CG ++ A   F  +  ++V SWN II  FA NG  E +  
Sbjct: 9   GHGSSTYVS--NMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVA 66

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L   M  +R     I T +T +        L EGR +H  AI   L  D  +  +++  Y
Sbjct: 67  LFWRM--IREEPGIIPTRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGTAIVTMY 124

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS----------QFSF 368
            KS SL+ A+ +F+ +    D+V+W ++I+     G  +E L L S          Q++F
Sbjct: 125 GKSRSLADAKRVFDQL-KRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTF 183

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           +    ++ +C     L+ G +IH      G  +     N+L+++Y NC  L  A  + QR
Sbjct: 184 TI---VIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQR 240

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   S  S WN +I A   NGH  +AI  +K M    +   D VT VNV+ AC + E   
Sbjct: 241 MPRRSSVS-WNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLA 299

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G+S+H  A+   +G    + +A ++MYGRC  ++ +   FE     +   W+ +I+A +
Sbjct: 300 AGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALA 359

Query: 549 QNKAEVRALELFRHLEF----EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           QN     AL  +R + +     PNE + +S+L AC+       G +IH H+   G   ++
Sbjct: 360 QNGESSSALHFYRRMIWSSSARPNEATFISVLEACS---FADEGIKIHQHIVDSGIVHST 416

Query: 605 FISSALLDMYSNC----------------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            IS+A+ +MY+ C                       ++ +W +MISA   HG   EA+EL
Sbjct: 417 MISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEALEL 476

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F EM   G +P++   IS+L  CSHSG +++GL ++  M++++ + P  EH+ C++D+LG
Sbjct: 477 FREMRLEGGKPSEIVFISILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVEHYGCLIDLLG 536

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R G L  A + +  +P +P    W   L +C  H D    +  A  +F+LEPE    Y+S
Sbjct: 537 RGGHLDLAQDLVDQMPFEPDARAWSNFLGSCRLHSDRDRAEAAAIRVFELEPEKAAIYVS 596

Query: 763 L 763
           L
Sbjct: 597 L 597



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 243/517 (47%), Gaps = 32/517 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +HC   + G  + + + N+ V MY KCG ++ +   FS +   +  SWN I++    N +
Sbjct: 1   LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
           PE+ +  F  M    E     +  + + A   L  L+ G+ IH L I +G E  P  +V 
Sbjct: 61  PERSVALFWRM-IREEPGIIPTRITFLHALEKLKNLAEGRKIHELAITVGLESDP--AVG 117

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            ++++MY +   +  A+R F  +  +DVV+W A+I  +  NG  EEA DL   M     V
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMD-PDGV 176

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+  T   +I  CA+   L  G ++H       L   + + NSL++ Y     L  AE 
Sbjct: 177 APNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAER 236

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPSCNSP 381
           +F  + P    VSWNSMI+             L+K M    S +    T + +L +C S 
Sbjct: 237 IFQRM-PRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQ 295

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           E L  G+SIH   +  G  ++ +  +A + MY  CG +  + +  +R+    D   W+ V
Sbjct: 296 EDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERME-IKDGVAWSAV 354

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I A  QNG    A+  ++ M    +A P+  T ++V+ AC     A EG  +H   + S 
Sbjct: 355 IAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEAC---SFADEGIKIHQHIVDSG 411

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCY-------NCNLCTWNCMISAFSQNKAEV 554
           +   T +  A+  MY +C  +  A  +F S         + N  +W  MISA +++ +  
Sbjct: 412 IVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSID 471

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
            ALELFR +  E   P+EI  +SIL  C+  G +  G
Sbjct: 472 EALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQG 508



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 154/600 (25%), Positives = 277/600 (46%), Gaps = 42/600 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +    S  ++  Y      + +  +F     ++V +WN +I A  +N      +  
Sbjct: 8   RGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVAL 67

Query: 61  FGEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           F  M+ E  GI     T +  + AL ++  L +GR +H L+I  G+ +D ++    V MY
Sbjct: 68  FWRMIREEPGI---IPTRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGTAIVTMY 124

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            K   L  ++  F  +   D V+W  +++    N + E+ L  +  M   G   +  + +
Sbjct: 125 GKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTFT 184

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             + A A LG L  G  IHA     G E   ++ V NSLI++Y  C  +  AER F  M 
Sbjct: 185 IVIDACAELGRLDVGIAIHARITAAGLES--WIEVANSLINLYGNCKRLRDAERIFQRMP 242

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +  VSWN++I  +A NG   +A DL   M+   SV+ D  T V ++  C     L  GR
Sbjct: 243 RRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGR 302

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           S+H  AI R LG  L++ ++ +  Y +  S+ ++   F  +  + D V+W+++I+ L   
Sbjct: 303 SIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERM-EIKDGVAWSAVIAALAQN 361

Query: 356 ---------FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    ++ M++  S + + +T +++L +C+  +    G  IH   +  G  ++T+ 
Sbjct: 362 GESSSALHFYRRMIWSSSARPNEATFISVLEACSFADE---GIKIHQHIVDSGIVHSTMI 418

Query: 406 VNALMHMYINCGDLVAAFSLLQ--RISHNSDTSC----WNIVIVACTQNGHFQEAIKTFK 459
             A+ +MY  CG L  A  +    R S  S  S     W  +I A  ++G   EA++ F+
Sbjct: 419 STAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEALELFR 478

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYG 517
            M + +   P  +  ++++  C +     +G   H LA+    GL  RV++   LI + G
Sbjct: 479 EM-RLEGGKPSEIVFISILHGCSHSGTMEQGLG-HFLAMIQDHGLAPRVEHYGCLIDLLG 536

Query: 518 RCRDIKSASTVFESC-YNCNLCTWNCMISA----FSQNKAEVRALELFRHLEFEPNEISI 572
           R   +  A  + +   +  +   W+  + +      +++AE  A+ +F   E EP + +I
Sbjct: 537 RGGHLDLAQDLVDQMPFEPDARAWSNFLGSCRLHSDRDRAEAAAIRVF---ELEPEKAAI 593


>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
 gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 208/726 (28%), Positives = 352/726 (48%), Gaps = 71/726 (9%)

Query: 87  NCLKQGRVVHCLSIKAG--MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
             L  G+ +H   +K G  +  +  +    V  Y+KC +   +   F  +   +  SW  
Sbjct: 92  RALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAA 151

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           IM       + ++ L+ FREM   G   DN  +  A  AS  L  + +GK +HA  +K+G
Sbjct: 152 IMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMG 211

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
                YV+   SL+ MY +CG  E A++ F  +  K++V+WN++I  F  NG   EA + 
Sbjct: 212 LGGCIYVA--TSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVET 269

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            +EM++   V P   T+ + +S  A+  ++ EG+  H  A+   L    ++ +SL++FYS
Sbjct: 270 FYEMRV-EGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYS 328

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCS-------QFSFSTLL 372
           K   +  AEL+F+ +    D V+WN ++SG     L    L LC        +F   TL 
Sbjct: 329 KVGLVEDAELVFSEMLE-KDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLA 387

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +I+ +     +L+ GK  H + ++    ++    ++++ MY  C  L  A  +    +  
Sbjct: 388 SIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATA-K 446

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN ++ A  + GH  E +K F  M Q +   P+ ++  +VI              
Sbjct: 447 RDLIMWNTLLAAYAEQGHSGETLKLFYQM-QLEGLPPNVISWNSVI-------------- 491

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNK 551
                    +GL  +         G+    K      +S   C NL TW  +I   +QN 
Sbjct: 492 ---------LGLLNK---------GKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNG 533

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               A   F+ +E    +PN +SI S+LSAC+ +  L HG+ IH ++       ++ +  
Sbjct: 534 LGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLC 593

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L++MY+ C               K    +++MIS Y  HG+  EA+ LF  +    I+P
Sbjct: 594 SLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKP 653

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
            + +  S+LSAC H+GLV EGL+ + +M+  + +  + EH+ C+V +L RS  L EA   
Sbjct: 654 DEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRI 713

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I  +P +P   ++G++L+AC  H D ++ +++ E L KLEP+N G Y++LSN Y A G W
Sbjct: 714 ILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMW 773

Query: 774 KDAVEI 779
            +A ++
Sbjct: 774 DEASKV 779



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 170/591 (28%), Positives = 285/591 (48%), Gaps = 50/591 (8%)

Query: 22  YFESSLALFYETCNKDVVTWNAMITACVENR---CVVMGLHF-----------FGEMVEE 67
           Y E+ L +FY  C++  +         V+N      +MGL             F EM E 
Sbjct: 116 YIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEY 175

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+  D+  + I   A   +  +  G+ VH   +K G+     +    ++MY KCG    +
Sbjct: 176 GLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEA 235

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F  +   + V+WN+++     N    + +  F EM   G     V+LSS ++ASA L
Sbjct: 236 KKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANL 295

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             +  GK  HAL +  G E +  +   +SLI+ YS+ G +E AE  F  M  KD V+WN 
Sbjct: 296 SVIDEGKQGHALAVLSGLELTNILG--SSLINFYSKVGLVEDAELVFSEMLEKDTVTWNL 353

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++ G+  NG  + A DL H MQ   ++  D  T+ ++++  ADS  L+ G+  H + +R 
Sbjct: 354 LVSGYVHNGLVDRALDLCHVMQ-SENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRN 412

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS 367
            L  D+ + +S++D Y+K   L  A  +F+A A   DL+ WN++++              
Sbjct: 413 NLESDVAVASSIIDMYAKCEKLECARRVFDATAK-RDLIMWNTLLA-------------- 457

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAA---F 423
                A     +S E+L+       +Q++L G   N I  N+++   +N G +  A   F
Sbjct: 458 -----AYAEQGHSGETLKL-----FYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTF 507

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
             +Q +    +   W  +I    QNG   EA  TF+SM ++    P+S+++ +++SAC  
Sbjct: 508 MEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSM-EEAGIKPNSLSISSLLSACST 566

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           +     G+++H    +  + + T V  +L+ MY +C  I  A  VF+      L  +N M
Sbjct: 567 MASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAM 626

Query: 544 ISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
           IS ++ +   V AL LFR L+ E   P+EI+  SILSAC   G++R G ++
Sbjct: 627 ISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLEL 677



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 266/585 (45%), Gaps = 79/585 (13%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +TSLL  Y      E +  +F +   K++V WN+MI    +N      +  F EM  EG
Sbjct: 218 VATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEG 277

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +     TL   +SA   ++ + +G+  H L++ +G+   + L +  +N Y+K G +  +E
Sbjct: 278 VAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAE 337

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             FS M   DTV+WN ++SG +HN   ++ L     M     + D+V+L+S +AA+A   
Sbjct: 338 LVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSR 397

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK  H+  ++   E    V+V +S+I MY++C  +E A R F     +D++ WN +
Sbjct: 398 NLKLGKEGHSFCVRNNLESD--VAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTL 455

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +  +A  G   E   L ++MQL   + P++ +  ++I       LL +G+          
Sbjct: 456 LAAYAEQGHSGETLKLFYQMQL-EGLPPNVISWNSVI-----LGLLNKGK---------- 499

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
                  ++   D + +  SL         I P  +L++W ++I GL +  L   +  +F
Sbjct: 500 -------VDQAKDTFMEMQSL--------GICP--NLITWTTLICGLAQNGLGDEAFLTF 542

Query: 369 STL--LAILP----------SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            ++    I P          +C++  SL  G++IHC+  +   S +T  + +L++MY  C
Sbjct: 543 QSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKC 602

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  +   I    +   +N +I     +G   EA+  F+ + +++   PD +T  +
Sbjct: 603 GSINQAKRVFDMIL-KKELPVYNAMISGYALHGQAVEALSLFRRL-KEECIKPDEITFTS 660

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++SACG+  L  EG  L                   I M    + +  A           
Sbjct: 661 ILSACGHAGLVREGLEL------------------FIDMVSNHKIVAQAE---------- 692

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQ 581
              + C++S  S++     AL +   + FEP+     S+L+AC +
Sbjct: 693 --HYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACRE 735



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 24/277 (8%)

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVIS 479
           A+FS +      S  S  N +   C Q GH  EA+     +  +     PD      ++ 
Sbjct: 30  ASFSQIASNVQISYKSYLNHISSLCKQ-GHLLEALDLVTDLELEDITIGPD--VYGELLQ 86

Query: 480 ACGNLELAFEGKSLHGLALKS--LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
            C        G+ +HG  LK+   +  +  ++  L+  Y +C + + A+ +F      N 
Sbjct: 87  GCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNE 146

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR---HGKQIHGH 594
            +W  ++   S+      AL  FR +      +    I  A    G LR    GK +H +
Sbjct: 147 FSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAY 206

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           V  +G     +++++LLDMY  C               K+  AW+SMI  +  +G   EA
Sbjct: 207 VVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEA 266

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
           +E F+EM   G+ PT+ ++ S LSA ++  ++DEG Q
Sbjct: 267 VETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQ 303


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 179/615 (29%), Positives = 310/615 (50%), Gaps = 37/615 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + +G+ +H      G+E +  V     LI MY+QCG +  A++ F  +  KDV +W  +I
Sbjct: 20  VDHGRRVHWHVRDRGFEQNNLV--CGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMI 77

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +   G ++ A  + ++MQ    V P   T V +++ CA +  L++G  +HG  +++  
Sbjct: 78  GIYCQQGDYDRALGMFYQMQ-EEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGF 136

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS 369
             D+ +  +L++ Y+K  S+  A   F  +    D+VSW +MI+   +   +  +++ + 
Sbjct: 137 EGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYR 195

Query: 370 ------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       TL  +  +   P  L  GK ++         ++   +N+ ++M+ N G
Sbjct: 196 RMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAG 255

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L  A  L + +  + D   WNIVI    QN +F EA++ F  + QQ     + +T V +
Sbjct: 256 LLGDARRLFEDMV-DRDVVTWNIVITLYVQNENFGEAVRLFGRL-QQDGVKANDITFVLM 313

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++   +L    +GK +H L  ++    D  V  AL+++YGRC     A  +F    + ++
Sbjct: 314 LNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDV 373

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            TW  M  A++QN     AL+LF+ ++ E   P   ++V++L  C  L  L+ G+QIH H
Sbjct: 374 ITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSH 433

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEA 639
           +    F+    + +AL++MY  C   A                W+SM+ AY  HG   E 
Sbjct: 434 IIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDET 493

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++LF++M   G++    S +S+LSA SHSG V +G QY+  ML+++ + P  E + C+VD
Sbjct: 494 LQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 553

Query: 700 MLGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           +LGR+G++QEA + +  L    P   +W  +L AC  H  T   K  AE + + +P + G
Sbjct: 554 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 613

Query: 759 YYISLSNMYVALGRW 773
            Y+ LSN+Y A G W
Sbjct: 614 AYVVLSNVYAAAGDW 628



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 242/493 (49%), Gaps = 35/493 (7%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +PD A  V L+  C+ +  +  GR VH +   R    + L+   L+  Y++  S+ +A+ 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 335 LFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  I    D+ +W  MI             G+F +M       +  T +AIL +C S E
Sbjct: 61  VFE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           SL+ G  IH   L+ GF  +     AL++MY  CG +  A+   +R+ H  D   W  +I
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMI 178

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
            AC Q+  F  A   ++ M Q     P+ +TL  V +A G+     EGK ++GL    +M
Sbjct: 179 AACVQHDQFALARWLYRRM-QLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D RV N+ + M+G    +  A  +FE   + ++ TWN +I+ + QN+    A+ LF  
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGR 297

Query: 563 LE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
           L+    + N+I+ V +L+  T L  L  GK IH  V   G+  ++ +++AL+ +Y  C++
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357

Query: 620 NA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                             W+ M  AY  +G   EA++LF EM   G RPT ++++++L  
Sbjct: 358 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 417

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C+H   + +G Q +++++E    R E      +++M G+ GK+ EA    + +  +    
Sbjct: 418 CAHLAALQKGRQIHSHIIENR-FRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDIL 475

Query: 725 VWGAMLSACSHHG 737
           VW +ML A + HG
Sbjct: 476 VWNSMLGAYAQHG 488



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 165/630 (26%), Positives = 288/630 (45%), Gaps = 42/630 (6%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+   + ++   +    +  GR VH      G   ++ +C   + MYA+CG +  ++  F
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 132 SGMHCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
             +   D  +W T M G  C   +Y ++ L  F +M         V+  + + A A    
Sbjct: 63  EILERKDVFAW-TRMIGIYCQQGDY-DRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  IH   ++ G+E   +V    +LI+MY++CG +  A  +F  +  +DVVSW A+I
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                + +F  A  L   MQL   V P+  T+ T+ +   D   L EG+ V+G     ++
Sbjct: 179 AACVQHDQFALARWLYRRMQL-DGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS 364
             D+ +MNS ++ +  +  L  A  LF  +    D+V+WN +I+       F E + L  
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVD-RDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +           T + +L    S  SL  GK IH    + G+  + +   ALM +Y  C 
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCE 356

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               A+ +   +  + D   W ++ VA  QNG  +EA++ F+ M Q +   P S TLV V
Sbjct: 357 APGQAWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEM-QLEGRRPTSATLVAV 414

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +  C +L    +G+ +H   +++   ++  V+ ALI MYG+C  +  A +VFE     ++
Sbjct: 415 LDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDI 474

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
             WN M+ A++Q+      L+LF  ++ +    + +S VS+LSA +  G +  G Q    
Sbjct: 475 LVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQY--- 531

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
                     F+  A+L  +S   +   +  ++   G  G+  EA+++  ++  SG  P 
Sbjct: 532 ----------FV--AMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKL--SGCLPD 577

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
               ++LL AC      D+       +LE 
Sbjct: 578 GILWMTLLGACRTHNKTDQAKAAAEQVLER 607



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 256/593 (43%), Gaps = 22/593 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  +      L+  Y+       +  +F     KDV  W  MI    +       L  
Sbjct: 33  RGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGM 92

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M EE +     T + I++A      LK G  +H   ++ G   D  +    +NMY K
Sbjct: 93  FYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNK 152

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  +  +F  +   D VSW  +++ C+ ++        +R M   G   + ++L + 
Sbjct: 153 CGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTV 212

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
             A      LS GK ++ L +  G  +S  V V NS ++M+   G +  A R F  M  +
Sbjct: 213 FNAYGDPNYLSEGKFVYGL-VSSGVMESD-VRVMNSAVNMFGNAGLLGDARRLFEDMVDR 270

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV+WN +I  +  N  F EA  L   +Q    V+ +  T V ++++      L +G+ +
Sbjct: 271 DVVTWNIVITLYVQNENFGEAVRLFGRLQ-QDGVKANDITFVLMLNVYTSLTSLAKGKVI 329

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL 355
           H          D ++  +LM  Y +  +  +A  +F  +    D+++W  M      +G 
Sbjct: 330 HELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGS-KDVITWTVMCVAYAQNGF 388

Query: 356 FKEMLYLCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            KE L L  +          +TL+A+L +C    +L+ G+ IH   ++  F    +   A
Sbjct: 389 RKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETA 448

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG +  A S+ ++++   D   WN ++ A  Q+G++ E ++ F  M Q     
Sbjct: 449 LINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQM-QLDGVK 506

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT-RVQNALITMYGRCRDIKSAST 527
            D+V+ V+V+SA  +     +G       L+      T  +   ++ + GR   I+ A  
Sbjct: 507 ADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVD 566

Query: 528 VFESCYNC--NLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
           +      C  +   W  ++ A  + NK +       + LE +P+      +LS
Sbjct: 567 IVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLS 619


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 179/566 (31%), Positives = 291/566 (51%), Gaps = 38/566 (6%)

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I G+++ G      ++ ++M  +  V PD  T   ++  CAD+  +R+GR VHG  
Sbjct: 10  WNTLIRGYSIAG-VGGGLEVYNQMVRI-GVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
           ++     D+ + N+L+ FY     L  A  +F+ + P  DLVSWN+MI            
Sbjct: 68  VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEM-PEKDLVSWNTMIGVFSVNGWHYRD 126

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F+ M+    + +  T+ + LP     E  + G+ +H   +++G  ++    N+L+ 
Sbjct: 127 ALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLID 186

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G    A ++  ++   +  S WN +I    QN     A+   + M Q     P+S
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVS-WNAMIANFAQNRFELVAVGLVRQM-QDYGELPNS 244

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT  NV+ AC  + L   GK +H  ++      D  V NAL  MY +   +K A  VF++
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT 304

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHG 588
               +  ++N +I   SQ      +L LF  ++    + + +S +  LSAC  L  ++ G
Sbjct: 305 SLR-DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG 363

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K+IHG +    F  + F++++LLD Y+ C               K  A+W++MI  YG  
Sbjct: 364 KEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGML 423

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G+   AI+LF  M    +     S I++LSACSH GL+++G +Y++  L+   + P   H
Sbjct: 424 GELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDE-LKARGIEPTQMH 482

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+LGR+G ++EA E IK LPI P   +WGA+L AC  +G+ ++    AE LF+L+
Sbjct: 483 YACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELK 542

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           PE+ GYY  LSNMY   GRW +A  I
Sbjct: 543 PEHSGYYTLLSNMYAETGRWDEANRI 568



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 175/678 (25%), Positives = 296/678 (43%), Gaps = 71/678 (10%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN +I        V  GL  + +MV  G+R D  T   ++ A      +++GR VH   +
Sbjct: 10  WNTLIRG-YSIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK-CL 159
           K G  +D  + N  ++ Y  CG L  +   F  M   D VSWNT++     N +  +  L
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
             FR M   G + +++++SS +     L     G+ +H   I++G E   +++  NSLI 
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIA--NSLID 186

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDI 278
           MY++ G    A   F+ +  K+VVSWNA+I  FA N +FE  A  L+ +MQ    + P+ 
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQN-RFELVAVGLVRQMQDYGEL-PNS 244

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T   ++  CA   L+R G+ +H  +I     +DL + N+L D Y+KS  L  A  +F+ 
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD- 303

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
              + D VS+N +I G            LF EM  +  +    + +  L +C +  +++ 
Sbjct: 304 -TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQ 362

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK IH + L+  F  +    N+L+  Y  CG +  A ++  R++ N D + WN +I+   
Sbjct: 363 GKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMT-NKDVASWNTMILGYG 421

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
             G    AI  F++M ++ +   DSV+ + V+SAC          S  GL  K     D 
Sbjct: 422 MLGELDTAIDLFENM-RKDDVEYDSVSFIAVLSAC----------SHGGLLEKGRKYFDE 470

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
                      + R I+                + CM+    +      A EL + L   
Sbjct: 471 L----------KARGIEPTQM-----------HYACMVDLLGRAGLMEEAAELIKGLPIV 509

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSM 626
           P+     ++L AC   G L        H+F L   E+S   + L +MY+           
Sbjct: 510 PDANIWGALLGACRIYGNLELAAWAAEHLFELK-PEHSGYYTLLSNMYAET--------- 559

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
                  G+  EA  +   M + G++ +       +   +H+ +V E ++  +  L  + 
Sbjct: 560 -------GRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGLDLGLWPFK 612

Query: 687 VRPETEHHVCIVDMLGRS 704
            +      + I+D L +S
Sbjct: 613 SKAVPLFRLTILDFLPKS 630



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 225/466 (48%), Gaps = 18/466 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           GF + +    +LL+ Y N      +  +F E   KD+V+WN MI    V        L  
Sbjct: 71  GFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDM 130

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M++EG++ +S T+   +  L ++   K GR VH  SI+ G+ +D  + N  ++MYAK
Sbjct: 131 FRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAK 190

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G    +   F  +   + VSWN +++    N +    +   R+M   GE  ++V+ ++ 
Sbjct: 191 SGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNV 250

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A +G +  GK IHA  I +G     +VS  N+L  MY++ G ++ A   F   + +
Sbjct: 251 LPACARMGLVRPGKEIHARSIHMGCAFDLFVS--NALTDMYAKSGHLKLARNVF-DTSLR 307

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VS+N +I G +      E+  L  EMQLM  ++ D  + +  +S CA+   +++G+ +
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQLM-GLKQDNVSFMGALSACANLTAIKQGKEI 366

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG+ +R+L    L + NSL+DFY+K   +  A  +F+ +    D+ SWN+MI G      
Sbjct: 367 HGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTN-KDVASWNTMILGYGMLGE 425

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF+ M     ++   + +A+L +C+    LE G+         G     +    
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYAC 485

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++ +    G +  A  L++ +    D + W  ++ AC   G+ + A
Sbjct: 486 MVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELA 531


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 194/618 (31%), Positives = 310/618 (50%), Gaps = 41/618 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L + K IHA  IK       +++    LI +YS  G +  A   F   +  +    NA+I
Sbjct: 60  LIHVKSIHAQIIKNWVSTESFLAA--KLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMI 117

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL--CADSLLLREGRSVHGYAIRR 307
            GF  N +  E   L    ++M S + +I +   + +L  C D L    G  +   A+RR
Sbjct: 118 AGFLRNQQHMEVPRLF---RMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRR 174

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                L + +S+++F  K   L+ A+ +F+ + P  D+V WNS+I G            +
Sbjct: 175 GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGM-PEKDVVCWNSIIGGYVQKGLFWESIQM 233

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F EM+    + S  T+  +L +C      + G   H + L LG  N+   + +L+ MY N
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSN 293

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            GD  +A  +   +   S  S WN +I    QNG   E+   F+ + Q   +  DS TLV
Sbjct: 294 LGDTGSAALVFDSMCSRSLIS-WNAMISGYVQNGMIPESYALFRRLVQS-GSGFDSGTLV 351

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           ++I  C        G+ LH   ++  +     +  A++ MY +C  IK A+ VF      
Sbjct: 352 SLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIH 592
           N+ TW  M+   SQN     AL+LF  ++ E    N +++VS++  C  LG L  G+ +H
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVH 471

Query: 593 GHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKG 636
            H    G+  ++ I+SAL+DMY+ C                K     +SMI  YG HG G
Sbjct: 472 AHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHG 531

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
             A+ ++  M    ++P +++ +SLL+ACSHSGLV+EG   +++M  ++DVRP+ +H+ C
Sbjct: 532 RYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+  R+G+L+EA E +K +P QP   V  A+LS C  H +T MG Q+A+ L  L+  N
Sbjct: 592 LVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLN 651

Query: 757 VGYYISLSNMYVALGRWK 774
            G Y+ LSN+Y    +W+
Sbjct: 652 SGIYVMLSNIYAEARKWE 669



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 215/458 (46%), Gaps = 16/458 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  HL   +S++       Y   +  +F     KDVV WN++I   V+       +  
Sbjct: 174 RGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQM 233

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+  G+R    T+  ++ A  Q    K G   H   +  GM  D  +    V+MY+ 
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSN 293

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            GD  S+   F  M     +SWN ++SG + N    +    FR +  SG   D+ +L S 
Sbjct: 294 LGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSL 353

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +   +L  G+++H+  I+   E   ++ ++ +++ MYS+CG I+ A   F  M  K
Sbjct: 354 IRGCSQTSDLENGRILHSCIIRKELES--HLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V++W A++ G + NG  E+A  L  +MQ    V  +  T+V+L+  CA    L +GR+V
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQ-EEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
           H + IR    +D ++ ++L+D Y+K   +  AE LFN    + D++  NSMI        
Sbjct: 471 HAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGH 530

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVN 407
                G++  M+    + + +T +++L +C+    +E GK++ H  +             
Sbjct: 531 GRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYA 590

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            L+ ++   G L  A  L++++     T     ++  C
Sbjct: 591 CLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGC 628



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 279/631 (44%), Gaps = 55/631 (8%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +  L+  YS++ +   +  +F +    +    NAMI   + N+  +     F  M    I
Sbjct: 82  AAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDI 141

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +S T +  + A T +   + G  +   +++ G      + +  VN   K G L  ++ 
Sbjct: 142 EINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQK 201

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F GM   D V WN+I+ G +      + +  F EM   G +   V++++ + A    G 
Sbjct: 202 VFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              G   H+  + LG  +   V V  SL+ MYS  GD  +A   F  M  + ++SWNA+I
Sbjct: 262 KKVGMCAHSYVLALGMGND--VFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMI 319

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+  NG   E++ L   + +      D  T+V+LI  C+ +  L  GR +H   IR+ L
Sbjct: 320 SGYVQNGMIPESYALFRRL-VQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKEL 378

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCS 364
              L++  +++D YSK  ++ +A ++F  +   N +++W +M+ GL +     + L L  
Sbjct: 379 ESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKN-VITWTAMLVGLSQNGYAEDALKLFC 437

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q           TL++++  C    SL  G+++H   ++ G++ + +  +AL+ MY  CG
Sbjct: 438 QMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCG 497

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            + +A  L     H  D    N +I+    +GH + A+  +  M +++   P+  T V++
Sbjct: 498 KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEER-LKPNQTTFVSL 556

Query: 478 ISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++AC +  L  EGK+L H +        D R Q+                          
Sbjct: 557 LTACSHSGLVEEGKALFHSMERDH----DVRPQHK------------------------- 587

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
              + C++   S+      A EL + + F+P+   + ++LS C        G QI   + 
Sbjct: 588 --HYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLI 645

Query: 597 HLGFQENSFISSALLDMYSNCKSNA-AWSSM 626
            L      +++S +  M SN  + A  W S+
Sbjct: 646 SL-----DYLNSGIYVMLSNIYAEARKWESV 671


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 162/429 (37%), Positives = 246/429 (57%), Gaps = 25/429 (5%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +++IL +C +   +  G+++H   +K      T   N L+ MY  CG L  A  +   +S
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELA 487
             +  + W  +I A  + G   EAI+ F  M  ++  SPD  T+  V+ AC   G+LE  
Sbjct: 61  VRTVVT-WTSLIAAYAREGLSDEAIRLFHEM-DREGVSPDIFTITTVLHACACNGSLE-- 116

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             GK +H    ++ M  +  V NAL+ MY +C  ++ A++VF      ++ +WN MI  +
Sbjct: 117 -NGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGY 175

Query: 548 SQNKAEVRALELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           S+N     AL LF    LE +P+  ++  IL AC  L  L  GK++HGH+   GF  +  
Sbjct: 176 SKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQ 235

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +++AL+DMY  C               K    W+ MI+ YG HG G  AI  F+EM  +G
Sbjct: 236 VANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAG 295

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           I P + S IS+L ACSHSGL+DEG +++N M +E +V+P+ EH+ CIVD+L RSGKL  A
Sbjct: 296 IEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMA 355

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
           Y+FIK++PI+P   +WGA+LS C  H D K+ ++VAE +F+LEPEN GYY+ L+N Y   
Sbjct: 356 YKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEA 415

Query: 771 GRWKDAVEI 779
            +W++  ++
Sbjct: 416 EKWEEVKKL 424



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR VH   +KA +   ++ CN  ++MYAKCG L+ +   F  M     V+W ++++    
Sbjct: 17  GRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAR 76

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
               ++ +  F EM   G   D  ++++ + A AC G L  GK +H    +   + + + 
Sbjct: 77  EGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIF- 135

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V N+L+ MY++CG +E A   F  M  KD++SWN +I G++ N    EA  L  +M L 
Sbjct: 136 -VCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVL- 193

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             ++PD  T+  ++  CA    L  G+ VHG+ +R     D  + N+L+D Y K      
Sbjct: 194 -EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVL 252

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A LLF+ I P  DL++W  MI+G             F EM     +    + ++IL +C+
Sbjct: 253 ARLLFDMI-PTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311

Query: 380 SPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               L+ G +  +  Q +            ++ +    G L  A+  ++ +    D + W
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371

Query: 439 NIVIVAC 445
             ++  C
Sbjct: 372 GALLSGC 378



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 162/344 (47%), Gaps = 5/344 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y+     + ++ +F     + VVTW ++I A          +  F EM  EG+  
Sbjct: 38  TLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSP 97

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+  ++ A      L+ G+ VH    +  M ++  +CN  ++MYAKCG +  +   F
Sbjct: 98  DIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVF 157

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D +SWNT++ G   N+ P + L  F +M     + D  +L+  + A A L  L 
Sbjct: 158 LEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLD 216

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +H   ++ G+     V+  N+L+ MY +CG    A   F  +  KD+++W  +I G
Sbjct: 217 RGKEVHGHILRNGFFSDQQVA--NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAG 274

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RSVHGYAIRRLLG 310
           + ++G    A    +EM+    +EPD  + ++++  C+ S LL EG R  +       + 
Sbjct: 275 YGMHGFGNNAITTFNEMR-QAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVK 333

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             L     ++D  ++S  L+ A     ++    D   W +++SG
Sbjct: 334 PKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377


>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
 gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
          Length = 841

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 205/723 (28%), Positives = 352/723 (48%), Gaps = 51/723 (7%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K G +A +   N     YA+ G L+S+   F  M   + VSW  ++S    N  P     
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI-----HALGIKLGYEDSPYVSVTN 215
           +F  M  SG   +  SL++ + A   +   S  K++     H + ++ G + +P+V   +
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVG--S 132

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+ MY++ G I AA+RAF  +  KD+  WNA+++G+  NG    A   +  M     + 
Sbjct: 133 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMH-HSGLA 191

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T ++ +  C+ S     GR +H   I  +L  +  +MNSL+D Y ++     A  +
Sbjct: 192 PDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 251

Query: 336 FNAIAPMNDLVSWNSMISG---------LFKEML------YLCSQFSFSTLLAILPSCNS 380
           F  I    D VSWN+M SG         +F  ++      +  ++ +FS LL +     +
Sbjct: 252 FRKIR-QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRL---SGA 307

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E+   G  I     + G+++N +  NA+++M   CG L  A+     ++  +  + WN 
Sbjct: 308 KENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVT-WNE 366

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I       H ++A++ F+S+       PD  T   V+SA      A + + +H + LK 
Sbjct: 367 IIAGYGLFSHSEDAMRLFRSLVCI-GERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQ 425

Query: 501 LMGLDTRVQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQ---NKAEVRA 556
                  V  +LI         ++S+  + E      L +W  +ISAF +   N   +  
Sbjct: 426 GFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFL 485

Query: 557 LELFR-HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
             LFR     +P+E  + ++L+AC    ++RH + IH  V   G   +  ++SA++D Y+
Sbjct: 486 FNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYA 545

Query: 616 NC---------------KSNAA--WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
            C                +N A  +++M++AY  HG   EA+ L+ EM  + + PT ++ 
Sbjct: 546 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 605

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +++LSACSH GLV++G   ++ ML  Y + P   ++ C+VD+L R G L EA   I  +P
Sbjct: 606 VAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMP 665

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            QP P VW ++++ C  HG+ ++G   AE + ++ P + G Y+SLSN+Y   G W+ A E
Sbjct: 666 FQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEE 725

Query: 779 IGK 781
             +
Sbjct: 726 TRR 728



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 234/500 (46%), Gaps = 28/500 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SLL  Y+      ++   F    NKD+  WNAM+   V N      +     M   G+ 
Sbjct: 132 SSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLA 191

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T +  V A +       GR +HCL I + + +++S+ N  V+MY +     ++   
Sbjct: 192 PDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 251

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DTVSWNT+ SG  H+   +    Y  +M  +G + + V+ S  +  S      
Sbjct: 252 FRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 311

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S G  I AL  + GY D+  V V N++I+M  +CG ++ A   F  +T +++V+WN II 
Sbjct: 312 SLGLQIFALAYRHGYTDN--VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIA 369

Query: 251 GFALNGKFEEAFDLLHEMQLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           G+ L    E+A      M+L RS+      PD  T   ++S   ++   R+   +H   +
Sbjct: 370 GYGLFSHSEDA------MRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIIL 423

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEML 360
           ++       +  SL+   + +    ++ L     +   +LVSW ++IS     GL  E++
Sbjct: 424 KQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVI 483

Query: 361 YLCSQFSFST--------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +L + F   +        L  +L +C +   +   + IH   LK G SN+    +A++  
Sbjct: 484 FLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDA 543

Query: 413 YINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG++ +A S    +S   +D   +N ++ A   +G   EA+  ++ MT+ +  +P  
Sbjct: 544 YAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK-LNPTP 602

Query: 472 VTLVNVISACGNLELAFEGK 491
            T V ++SAC +L L  +GK
Sbjct: 603 ATFVAILSACSHLGLVEQGK 622



 Score = 43.1 bits (100), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 71/153 (46%), Gaps = 5/153 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           H   +++++ AY+      S+ + F    +   D + +N M+TA   +  +   L+ + E
Sbjct: 533 HFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEE 592

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCG 122
           M +  +     T + I+SA + +  ++QG++     + A GM    +     V++ A+ G
Sbjct: 593 MTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKG 652

Query: 123 DLNSSECTFSGMHCAD-TVSWNTIMSGC-LHNN 153
            L+ ++     M        W ++++GC +H N
Sbjct: 653 LLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGN 685


>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
          Length = 787

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 204/723 (28%), Positives = 353/723 (48%), Gaps = 51/723 (7%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K G +A +   N  +  YA+ G L+S+   F  M   + VSW  ++S    N  P     
Sbjct: 56  KLGTLAHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 115

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKV-----IHALGIKLGYEDSPYVSVTN 215
           +F  M  SG   +  +L++ + A   +   S  K+     +H + ++ G + +P+V   +
Sbjct: 116 FFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVG--S 173

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+ MY++ G I AA+RAF  +  KD+  WNA+++G+  NG    A   +  M     + 
Sbjct: 174 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMH-HSGLA 232

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T ++ +  C+ S     GR +H   I  +L  +  +MNSL+D Y ++     A  +
Sbjct: 233 PDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 292

Query: 336 FNAIAPMNDLVSWNSMISG---------LFKEML------YLCSQFSFSTLLAILPSCNS 380
           F  I    D VSWN+M SG         +F  ++      +  ++ +FS LL +     +
Sbjct: 293 FRKIR-QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRL---SGA 348

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E+   G  I     + G+++N +  NA+++M   CG L  A+     ++  +  + WN 
Sbjct: 349 KENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVT-WNE 407

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I         ++A++ F+S+       PD  T   V+SA      A + + +H + LK 
Sbjct: 408 IIAGYGLFSRSEDAMRLFRSLVCI-GERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQ 466

Query: 501 LMGLDTRVQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQ---NKAEVRA 556
                  V  +LI         ++S+  + E      L +W  +ISAF +   N   +  
Sbjct: 467 GFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFL 526

Query: 557 LELFR-HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
             LFR     +P+E  + ++L+AC    ++RH + IH  V   G   +  ++SA++D Y+
Sbjct: 527 FNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYA 586

Query: 616 NC---------------KSNAA--WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
            C                +N A  +++M++AY  HG   EA+ L+ EM  + + PT ++ 
Sbjct: 587 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 646

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +++LSACSH GLV++G   ++ ML  Y + PE  ++ C+VD+L R G L EA   I  +P
Sbjct: 647 VAILSACSHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMP 706

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            QP P VW ++++ C  HG+ ++G   AE + ++ P + G Y+SLSN+Y   G W+ A E
Sbjct: 707 FQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEE 766

Query: 779 IGK 781
             +
Sbjct: 767 TRR 769



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 234/500 (46%), Gaps = 28/500 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SLL  Y+      ++   F    NKD+  WNAM+   V N      +     M   G+ 
Sbjct: 173 SSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLA 232

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T +  V A +       GR +HCL I + + +++S+ N  V+MY +     ++   
Sbjct: 233 PDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 292

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DTVSWNT+ SG  H+   +    Y  +M  +G + + V+ S  +  S      
Sbjct: 293 FRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 352

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S G  I AL  + GY D+  V V N++I+M  +CG ++ A   F  +T +++V+WN II 
Sbjct: 353 SLGLQIFALAYRHGYTDN--VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIA 410

Query: 251 GFALNGKFEEAFDLLHEMQLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           G+ L  + E+A      M+L RS+      PD  T   ++S   ++   R+   +H   +
Sbjct: 411 GYGLFSRSEDA------MRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIIL 464

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
           ++       +  SL+   + +    ++ L     +   +LVSW ++IS   K     E++
Sbjct: 465 KQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVI 524

Query: 361 YLCSQFSFST--------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +L + F   +        L  +L +C +   +   + IH   LK G SN+    +A++  
Sbjct: 525 FLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDA 584

Query: 413 YINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG++ +A S    +S   +D   +N ++ A   +G   EA+  ++ MT+ +  +P  
Sbjct: 585 YAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK-LNPTP 643

Query: 472 VTLVNVISACGNLELAFEGK 491
            T V ++SAC +L L  +GK
Sbjct: 644 ATFVAILSACSHLGLVEQGK 663



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           H   +++++ AY+      S+ + F    +   D + +N M+TA   +  +   L+ + E
Sbjct: 574 HFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEE 633

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCG 122
           M +  +     T + I+SA + +  ++QG++     + A GM  + +     V++ A+ G
Sbjct: 634 MTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKG 693

Query: 123 DLNSSECTFSGMHCAD-TVSWNTIMSGC-LHNN 153
            L+ ++     M        W ++++GC +H N
Sbjct: 694 LLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGN 726


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 173/554 (31%), Positives = 288/554 (51%), Gaps = 53/554 (9%)

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH---GYAIRRLLGYDLLMMNSL 319
           DL  + ++ RSV  D+  V     + A   L+    +     G++ RR +    ++    
Sbjct: 43  DLCCQQEIERSVSRDLPNV----QITAQHFLIFPEHTAFQFSGFSKRRSICAGAVLRRR- 97

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFS 367
              YS + +L+    LFN      ++ SWNS+I+ L            F  M  L  + +
Sbjct: 98  ---YSNNPNLTT---LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPN 151

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            ST    + SC++   L  G+  H   L  GF  +    +AL+ MY  CG+L  A +L  
Sbjct: 152 RSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD 211

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-------DSVTLVNVISA 480
            ISH +  S W  +I    QN     A+  FK    +++ S        D + +V+V+SA
Sbjct: 212 EISHRNIVS-WTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSA 270

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C  +      + +HG  +K     D  V+N L+  Y +C ++  +  VF+     ++ +W
Sbjct: 271 CSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISW 330

Query: 541 NCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           N +I+ ++QN     ++E+F  +    E   N +++ ++L AC   G  R GK IH  V 
Sbjct: 331 NSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI 390

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
            +G + N F+ ++++DMY  C               K+  +WS+M++ YG HG   EA+E
Sbjct: 391 KMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALE 450

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           +F+EM  +G++P   + +S+L+ACSH+GL++EG  ++  M  E+DV P  EH+ C+VD+L
Sbjct: 451 VFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLL 510

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G L+EA++ IK + ++P   VWGA+L AC  H +  +G+  A  LF+L+P+N GYY+
Sbjct: 511 GRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYV 570

Query: 762 SLSNMYVALGRWKD 775
            LSN+Y   GRW+D
Sbjct: 571 LLSNIYADAGRWED 584



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  S++L+  YS       +  LF E  ++++V+W +MIT  V+N      L  F
Sbjct: 182 GFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLF 241

Query: 62  GE-MVEEG-------IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
            E +VEE        +  D   ++ ++SA ++++       VH   IK G   D  + N 
Sbjct: 242 KEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENT 301

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            ++ YAKCG+L  S   F GM   D +SWN+I++    N    + +  F  M   GE   
Sbjct: 302 LMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 361

Query: 174 N-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           N V+LS+ + A A  G    GK IH   IK+G E + +V    S+I MY +CG +E A +
Sbjct: 362 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG--TSIIDMYCKCGKVEMARK 419

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           AF  M  K+V SW+A++ G+ ++G  +EA ++ +EM  M  V+P+  T V++++ C+ + 
Sbjct: 420 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN-MAGVKPNYITFVSVLAACSHAG 478

Query: 293 LLREG-----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           LL EG        H + +   + +       ++D   ++  L +A  L   +    D V 
Sbjct: 479 LLEEGWHWFKAMSHEFDVEPGVEH----YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 534

Query: 348 WNSMI 352
           W +++
Sbjct: 535 WGALL 539



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 212/443 (47%), Gaps = 33/443 (7%)

Query: 29  LFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMN 87
           LF +  +K +V +WN++I     +   V  L  F  M +  ++ + +T    + + + + 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L  GR  H  ++  G   D  + +  V+MY+KCG+L  +   F  +   + VSW ++++
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 148 GCLHNNYPEKCLLYFREM-----GWSGEQ---ADNVSLSSAVAASACLGELSYGKVIHAL 199
           G + N+   + LL F+E      G  G+     D +++ S ++A + + E S  + +H  
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            IK G+E    + V N+L+  Y++CG++  + R F GM  +DV+SWN+II  +A NG   
Sbjct: 287 LIKRGFEGD--LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMST 344

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           E+ ++ H M     +  +  T+  ++  CA S   R G+ +H   I+  L  ++ +  S+
Sbjct: 345 ESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 404

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D Y K   +  A   F+ +   N + SW++M++G            +F EM     + +
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKN-VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPN 463

Query: 368 FSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
           + T +++L +C+    LE     F    H + ++ G  +    V+ L       G L  A
Sbjct: 464 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG----RAGYLKEA 519

Query: 423 FSLLQRISHNSDTSCWNIVIVAC 445
           F L++ +    D   W  ++ AC
Sbjct: 520 FDLIKGMKLRPDFVVWGALLGAC 542



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 117/252 (46%), Gaps = 5/252 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   L    +L+ AY+       S  +F     +DV++WN++I    +N      +  
Sbjct: 290 RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEI 349

Query: 61  FGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  MV++G I +++ TL  ++ A       + G+ +H   IK G+ ++  +    ++MY 
Sbjct: 350 FHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYC 409

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG +  +   F  M   +  SW+ +++G   + + ++ L  F EM  +G + + ++  S
Sbjct: 410 KCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVS 469

Query: 180 AVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +AA +  G L  G     A+  +   E  P V     ++ +  + G ++ A     GM 
Sbjct: 470 VLAACSHAGLLEEGWHWFKAMSHEFDVE--PGVEHYGCMVDLLGRAGYLKEAFDLIKGMK 527

Query: 239 CK-DVVSWNAII 249
            + D V W A++
Sbjct: 528 LRPDFVVWGALL 539


>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
 gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
          Length = 704

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 177/594 (29%), Positives = 296/594 (49%), Gaps = 50/594 (8%)

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT----VVTLI 285
           A R F GM  +D V++  ++ G A  G F  A  L   +   R+  P +A     V++L+
Sbjct: 20  AHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRL---RASSPPLAPADPFVLSLV 76

Query: 286 ----SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
               +  AD+  L    S+H +A+R      + +  +L D Y+K+  L  A  +F+ + P
Sbjct: 77  FKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEM-P 135

Query: 342 MNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPES------------LEFGKS 389
             ++VSW ++++ L +      +   FS + A    C+S               L  G+ 
Sbjct: 136 HKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGRE 195

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H +  KLG  +     N L  +Y  C D+  A + + R+    D + W  VI A  Q G
Sbjct: 196 VHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMG-TRDVAAWTTVISAYVQTG 254

Query: 450 HFQEAIKTFKSMTQQQN---ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
             +EAI+ F  M ++++   ASP+  T   VI+AC ++     G+ LH  A +       
Sbjct: 255 RAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACAR 314

Query: 507 RVQNALITMYGRCRD-IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
            V N+L+T+Y R    + +A  VF      ++ +W+ +IS ++Q      A  LFR +  
Sbjct: 315 SVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRH 374

Query: 566 -----EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
                 PNE ++ S+LS C     L  G+Q+H      G + ++ I SAL+DMY    S 
Sbjct: 375 HSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSM 434

Query: 621 ---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                           +W++MI  Y  HG   +A+ELF EMC+ G++P   + I +L+AC
Sbjct: 435 LDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNAC 494

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG- 724
            H+G V+ GL+Y N M + Y + P  EH+ C+VD+LGR+G++ EA E I  +    + G 
Sbjct: 495 CHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGV 554

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           VW ++L AC+  G+ + GK+ AE   + EP   G +++++N+Y + G+W +A +
Sbjct: 555 VWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEAAQ 608



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 230/495 (46%), Gaps = 24/495 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L   Y+       +L +F E  +K+VV+W  ++ +          L  F EM   G+
Sbjct: 111 ATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGV 170

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             DS      ++A      L +GR VH    K G+ +   + N    +YA+C D++ +  
Sbjct: 171 HCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALA 230

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF----REMGWSGEQADNVSLSSAVAASA 185
             S M   D  +W T++S  +     ++ +  F    RE        +  + ++ +AA A
Sbjct: 231 AVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACA 290

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTCKDVVS 244
            +  +  G+ +HA   + G+  +   SV NSL+++Y++  G + AA+  F     KDVVS
Sbjct: 291 DIAWVCLGEQLHAQAARKGFACAR--SVANSLVTLYTRAAGCLSAADAVFRESVVKDVVS 348

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           W+AII G+A  G  E+AF L  EM+       P+  T+ +L+S+CA +  L  GR +H  
Sbjct: 349 WSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTL 408

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+   L +  ++ ++L+D Y KS S+  A+++F+     +D+VSW +MI G         
Sbjct: 409 AVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVK-DDVVSWTAMIVGYAEHGHSKK 467

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALM 410
              LF+EM ++  +    T + +L +C     +E G + ++      G          ++
Sbjct: 468 ALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVV 527

Query: 411 HMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNAS 468
            +    G +  A  L+ +I+ N  D   W  ++ AC   G  +   K   ++M  +   +
Sbjct: 528 DLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGA 587

Query: 469 PDSVTLVNVISACGN 483
              V + N+ ++ G 
Sbjct: 588 GAHVAMANLYASKGQ 602



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 33/421 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFV-----NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           H  S+ A  +  S++ +VFV     ++YAK G L  +   F  M   + VSW T+++   
Sbjct: 91  HAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLT 150

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 + L  F EM  SG   D+ + ++A+ A A  G LS G+ +HA   KLG + +PY
Sbjct: 151 RAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPY 210

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+  N+L ++Y++C D++ A  A   M  +DV +W  +I  +   G+ +EA +    M  
Sbjct: 211 VA--NTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLR 268

Query: 271 MRS---VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
             S     P+  T   +I+ CAD   +  G  +H  A R+       + NSL+  Y+++ 
Sbjct: 269 EESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAA 328

Query: 328 S-LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL--CSQFSFSTLL 372
             LS A+ +F   + + D+VSW+++ISG            LF+EM +   C + +  TL 
Sbjct: 329 GCLSAADAVFRE-SVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLA 387

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISH 431
           ++L  C +  SL+ G+ +H   +  G  ++ +  +AL+ MY   G ++ A      R+  
Sbjct: 388 SLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRV-- 445

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
             D   W  +IV   ++GH ++A++ F+ M       PD VT + V++AC   G +EL  
Sbjct: 446 KDDVVSWTAMIVGYAEHGHSKKALELFQEMC-HVGLKPDHVTFIGVLNACCHAGEVELGL 504

Query: 489 E 489
            
Sbjct: 505 R 505



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 8/265 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY-FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF      + SL+T Y+  +    ++ A+F E+  KDVV+W+A+I+   +         
Sbjct: 308 KGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFA 367

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F EM       R +  TL  ++S       L  GR +H L++ AG+   + + +  ++M
Sbjct: 368 LFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDM 427

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G +  ++  FS     D VSW  ++ G   + + +K L  F+EM   G + D+V+ 
Sbjct: 428 YGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTF 487

Query: 178 SSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              + A    GE+  G + ++ +    G    P       ++ +  + G I  AE     
Sbjct: 488 IGVLNACCHAGEVELGLRYLNEMNQIYGL--YPAKEHYGCVVDLLGRAGRINEAEELIGK 545

Query: 237 MTC--KDVVSWNAIIDGFALNGKFE 259
           +    +D V W +++   A  G+ E
Sbjct: 546 IAANERDGVVWTSLLRACAARGEEE 570


>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
 gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
          Length = 623

 Score =  295 bits (756), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 198/627 (31%), Positives = 306/627 (48%), Gaps = 58/627 (9%)

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVS-VTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A A L  L+ G+ IHA  +          + V N LI+MY +CG +E A   F  M   +
Sbjct: 11  ACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASMEHPN 70

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWN II   A  G    A  +   MQL  SV PD  +  ++ + C  +   RE R +H
Sbjct: 71  LVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANACGSA---REARIIH 127

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                R    D+++  SL+  Y+K  S+  A L+F+++A  N+ VSWN+M+SG       
Sbjct: 128 ASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNE-VSWNAMLSGYSQHGHG 186

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF+ ML    Q +  TLL ++ +C+S   L   ++  C     G        NA 
Sbjct: 187 AQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLR--QADEC-----GVEEEVAVRNAC 239

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++M+   GD+  A ++   +    D   WN+++      G   EA+   + M +Q    P
Sbjct: 240 INMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQM-EQHGFHP 298

Query: 470 DSVTLVNVISACGNLELAFEGKSLHG---LALKSLMGLDTRVQNALI-----TMYGRCRD 521
           D VT VN ++AC   E+   G+S+HG   L  +    L  R  NA++     +MY RC  
Sbjct: 299 DRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRT-NAVVGCSLCSMYARCGS 357

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           I  A+ VF      N+ +WN MI A++Q+     AL +F  ++    +P+ I+++S+L A
Sbjct: 358 IDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQQHGVKPDAITLISVLDA 417

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------------- 622
           C   G  R G Q+HG    L  + ++ + +A ++MY+     AA                
Sbjct: 418 CAGAGDARRGSQVHGWSLQLQLR-SAALDNAAVNMYAKSGRVAAAREVFEAMDAQRRTIM 476

Query: 623 -WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            WS+M++AY   G   EA  LFH M   G+RP   ++IS+L ACSH+G++  G   + +M
Sbjct: 477 SWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAGCSCFASM 536

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN--LPIQPKPGVWGAMLSACSHHGDT 739
             +Y V P  EH  C+VDMLGR+G +++A+  ++            W A+L ACS  GDT
Sbjct: 537 AADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQRSGAGGGGDAQAWMAVLGACSQQGDT 596

Query: 740 KMGKQVAELLFKLEPE-NVGYYISLSN 765
             G  VA  L    P+     Y++LSN
Sbjct: 597 LRGTCVASSLISRHPQAAAAAYVALSN 623



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 262/545 (48%), Gaps = 44/545 (8%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHC--LSIKAGMIADSSLC-NVFVNMYAKCGDLNSSE 128
           +++T   ++ A  ++  L QG+ +H   LS  +   + S+L  N  +NMY KCG +  + 
Sbjct: 1   EASTYARLLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEAR 60

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACL 187
             F+ M   + VSWNTI++           L  FR M        D VS +S   A+AC 
Sbjct: 61  AVFASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTS--VANAC- 117

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G     ++IHA     G+ D   V +  SLI+MY++CG IE A   F  M  ++ VSWNA
Sbjct: 118 GSAREARIIHASVAARGFLDD--VIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNA 175

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++ G++ +G   +   L   M L   V+P+  T++ +++ C+    LR+           
Sbjct: 176 MLSGYSQHGHGAQLLHLFRAM-LQGGVQPNAVTLLPVVNACSSLAQLRQADECG------ 228

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  ++ + N+ ++ ++K   + +A  +F ++    D++SWN M++G            L
Sbjct: 229 -VEEEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVL 287

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-------KLGFSNNTIGVNA 408
            ++M          T +  L +C+  E +E G+SIH   +        L    N +   +
Sbjct: 288 LRQMEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTPALSLRTNAVVGCS 347

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L  MY  CG +  A ++   +   +  S WN +I A  Q+G  + A+  F  M QQ    
Sbjct: 348 LCSMYARCGSIDEAAAVFAGMEQRNVVS-WNAMIGAYAQHGRARLALAVFGGM-QQHGVK 405

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD++TL++V+ AC     A  G  +HG +L+ L      + NA + MY +   + +A  V
Sbjct: 406 PDAITLISVLDACAGAGDARRGSQVHGWSLQ-LQLRSAALDNAAVNMYAKSGRVAAAREV 464

Query: 529 FES--CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
           FE+       + +W+ M++A++       A  LF  ++ E   PN ++++SIL AC+  G
Sbjct: 465 FEAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAG 524

Query: 584 VLRHG 588
           +L+ G
Sbjct: 525 MLQAG 529



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 226/491 (46%), Gaps = 38/491 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L+  Y      E + A+F    + ++V+WN +I A          L  F  M +E  +  
Sbjct: 46  LINMYGKCGRVEEARAVFASMEHPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVP 105

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  +   + +A       ++ R++H      G + D  +    + MYAKCG +  +   F
Sbjct: 106 DRVSFTSVANAC---GSAREARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDARLVF 162

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSWN ++SG   + +  + L  FR M   G Q + V+L   V A + L +L 
Sbjct: 163 DSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLR 222

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
                     + G E+   V+V N+ I+M+++ GD++ A   F  M   +DV+SWN ++ 
Sbjct: 223 QAD-------ECGVEEE--VAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMA 273

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A  G+ +EA  LL +M+      PD  T V  ++ C  + ++  GRS+HG  + +   
Sbjct: 274 GYANAGRGDEAVVLLRQME-QHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRD 332

Query: 311 YDLLMMN-------SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
              L +        SL   Y++  S+ +A  +F  +   N +VSWN+MI           
Sbjct: 333 TPALSLRTNAVVGCSLCSMYARCGSIDEAAAVFAGMEQRN-VVSWNAMIGAYAQHGRARL 391

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F  M     +    TL+++L +C        G  +H W L+L   +  +  NA ++
Sbjct: 392 ALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLRSAALD-NAAVN 450

Query: 412 MYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           MY   G + AA  + + +     T   W+ ++ A    GH +EA + F +M Q++   P+
Sbjct: 451 MYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAM-QREGVRPN 509

Query: 471 SVTLVNVISAC 481
            VTL++++ AC
Sbjct: 510 HVTLISILGAC 520



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 235/472 (49%), Gaps = 33/472 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGFL  +   TSL+T Y+     E +  +F     ++ V+WNAM++   ++      LH 
Sbjct: 133 RGFLDDVIIGTSLITMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHL 192

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M++ G++ ++ TLL +V+A + +  L+Q       + + G+  + ++ N  +NM+AK
Sbjct: 193 FRAMLQGGVQPNAVTLLPVVNACSSLAQLRQ-------ADECGVEEEVAVRNACINMHAK 245

Query: 121 CGDLNSSECTFSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            GD++ +   F+ M  A D +SWN +M+G  +    ++ ++  R+M   G   D V+  +
Sbjct: 246 RGDVDRAAAIFASMVAARDVISWNVMMAGYANAGRGDEAVVLLRQMEQHGFHPDRVTYVN 305

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSV-TN-----SLISMYSQCGDIEAAERA 233
            + A      + +G+ IH   I L   D+P +S+ TN     SL SMY++CG I+ A   
Sbjct: 306 FLNACDKAEMVEHGRSIHGR-IVLQSRDTPALSLRTNAVVGCSLCSMYARCGSIDEAAAV 364

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F GM  ++VVSWNA+I  +A +G+   A  +   MQ    V+PD  T+++++  CA +  
Sbjct: 365 FAGMEQRNVVSWNAMIGAYAQHGRARLALAVFGGMQ-QHGVKPDAITLISVLDACAGAGD 423

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMI 352
            R G  VHG++++  L     + N+ ++ Y+KS  ++ A  +F A+ A    ++SW++M+
Sbjct: 424 ARRGSQVHGWSLQLQL-RSAALDNAAVNMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMV 482

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGF 399
           +             LF  M     + +  TL++IL +C+    L+ G S         G 
Sbjct: 483 AAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAGCSCFASMAADYGV 542

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQR--ISHNSDTSCWNIVIVACTQNG 449
                    ++ M    G +  A  L+QR       D   W  V+ AC+Q G
Sbjct: 543 WPREEHTGCVVDMLGRAGWVEQAHRLVQRSGAGGGGDAQAWMAVLGACSQQG 594



 Score = 42.7 bits (99), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 30/185 (16%)

Query: 575 ILSACTQLGVLRHGKQIHGHVF---HLGFQENSFISSALLDMYSNC-------------- 617
           +L AC +L  L  G++IH H+          ++ + + L++MY  C              
Sbjct: 8   LLQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASME 67

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             +  +W+++I+A+   G G  A+ +F  M   + + P + S  S+ +AC   G   E  
Sbjct: 68  HPNLVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANAC---GSAREAR 124

Query: 676 QYYNNMLEEY---DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
             + ++       DV   T     ++ M  + G +++A     ++  + +   W AMLS 
Sbjct: 125 IIHASVAARGFLDDVIIGTS----LITMYAKCGSIEDARLVFDSMAERNEVS-WNAMLSG 179

Query: 733 CSHHG 737
            S HG
Sbjct: 180 YSQHG 184


>gi|302814338|ref|XP_002988853.1| hypothetical protein SELMODRAFT_128850 [Selaginella moellendorffii]
 gi|300143424|gb|EFJ10115.1| hypothetical protein SELMODRAFT_128850 [Selaginella moellendorffii]
          Length = 981

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 214/795 (26%), Positives = 384/795 (48%), Gaps = 66/795 (8%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           F  +  +F     KDV TWNAM+   +        L  F EM    +  D ++ +  ++A
Sbjct: 196 FGHARQVFEGVLAKDVRTWNAMMDVYMRRFDYSEVLRLFQEM---DVVPDRSSFVKALNA 252

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS-GMHCADTVS 141
            + +  L+QGRV+H  +I+ G  AD  +     ++Y+K  +L+     F+   H    V 
Sbjct: 253 CSGLGDLEQGRVLHEQAIEKGFHADVRVEAAIFSLYSKGQNLD---VLFNYAPHHDSVVL 309

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGELSYGKVIHAL 199
           W   M+      +    + YF  M   G + D V+L + V A   +C   L+ G+++H+ 
Sbjct: 310 WTRRMAASTKQGHSATTMQYFGLMQLEGIKPDRVTLLTIVDALDRSCF--LAVGRMVHSH 367

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
             +LG       S+ N++++MY++CG +E A R F  +  KD++SWN II  +     +E
Sbjct: 368 ARELGL--GGLASLMNAVMNMYARCGSLEEAVRVFAEIR-KDLISWNTIIGAYVHYAHYE 424

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR----RLLGYDLLM 315
           EA +L  +MQL +   PD  T++ ++ +C++S    + + +H   +     R    D  +
Sbjct: 425 EAINLFQQMQL-QGFLPDKITLLAMLKVCSNSKFFLKSKLIHACVVELGDERGYARDTFV 483

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMIS-----GLFKEMLYLCSQFSFS 369
             +L+D YSK   L +A  +F  ++  + ++V W +M+S     G F E L         
Sbjct: 484 ATALLDTYSKCGRLEEARCVFETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQ 543

Query: 370 -------TLLAILPSCNSPE--SLEFGKSIHCWQ--LKLGFSNNTIGVNALMHMYINCGD 418
                  T+ A+L +C+  E  + E    +  ++  ++LG     +  NA + ++   G+
Sbjct: 544 GEAPNKVTMAAVLTACSKVELEADELKSVMRVYRCCVELGQDRELVVGNAALSVHAKLGN 603

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  +  R+   +  S WN ++ AC Q G  +E    F+ M  + ++ PD+ T + ++
Sbjct: 604 LREAREIFSRMWTRNVVS-WNSILSACAQVGESRECRCLFRHMLLESDSRPDNYTFITIL 662

Query: 479 SACG-NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
             C  + E    G+ LH LA +S   LD  V  AL+ MY  C  ++ A+T F +    ++
Sbjct: 663 GVCKQSREDLTHGRILHQLARESSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPDV 722

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN MISA S      R  +LF+ ++     P+ ++ V++L+ACT    L  G+++   
Sbjct: 723 VSWNAMISALSHYGEFQRVFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFSE 782

Query: 595 VFHLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGW 637
               GF   + +++A ++++  C                 KS  AW+ + +A  +  +  
Sbjct: 783 AVRAGF--GAEVAAAGINLFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPS 840

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           E I +   M  SGI P   + +S+LS  SH+G V+      ++M  ++ + P   H+ C+
Sbjct: 841 EVIRVLECMRLSGIDPDLVTFVSVLSTLSHAGFVEACCYQLSSMSTDHGLTPSATHYCCV 900

Query: 698 VDMLGRSGKLQEAYEFIKNLPI------QPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +D+LGR+G L EA E + +          P   +W + L+AC  HGD++ GK+  E +  
Sbjct: 901 IDVLGRAGLLDEAEEMLSSSRSSGGSGDDPLVVLWTSFLAACGIHGDSERGKRAVERILA 960

Query: 752 LEPENVGYYISLSNM 766
            +PE+   Y+ LSN+
Sbjct: 961 RQPEDAATYVVLSNI 975



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 204/793 (25%), Positives = 362/793 (45%), Gaps = 84/793 (10%)

Query: 30  FYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM-NC 88
           FY+  N+  V W +MI A             F  M+ EG+  DS TL  ++S    + + 
Sbjct: 104 FYKMPNRGPVPWTSMIGALAREFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCGNLEDR 163

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            +  R++H ++++ G  +++ +    V+M     D   +   F G+   D  +WN +M  
Sbjct: 164 GRASRLLHSIAVETGRDSETIVGTALVSMLP---DFGHARQVFEGVLAKDVRTWNAMMDV 220

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            +      + L  F+EM       D  S   A+ A + LG+L  G+V+H   I+ G+   
Sbjct: 221 YMRRFDYSEVLRLFQEMDVV---PDRSSFVKALNACSGLGDLEQGRVLHEQAIEKGFHAD 277

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V  ++ S+YS+  +++      +      VV W   +      G           M
Sbjct: 278 --VRVEAAIFSLYSKGQNLDVLFN--YAPHHDSVVLWTRRMAASTKQGHSATTMQYFGLM 333

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           QL   ++PD  T++T++     S  L  GR VH +A    LG    +MN++M+ Y++  S
Sbjct: 334 QL-EGIKPDRVTLLTIVDALDRSCFLAVGRMVHSHARELGLGGLASLMNAVMNMYARCGS 392

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILP 376
           L +A  +F  I    DL+SWN++I        ++E + L  Q           TLLA+L 
Sbjct: 393 LEEAVRVFAEI--RKDLISWNTIIGAYVHYAHYEEAINLFQQMQLQGFLPDKITLLAMLK 450

Query: 377 SCNSPESLEFGKSIHCWQLKL----GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-H 431
            C++ +     K IH   ++L    G++ +T    AL+  Y  CG L  A  + + +S  
Sbjct: 451 VCSNSKFFLKSKLIHACVVELGDERGYARDTFVATALLDTYSKCGRLEEARCVFETLSLG 510

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + +  CW  ++ A  Q+G F EA+  F+ M Q Q  +P+ VT+  V++AC  +EL  +  
Sbjct: 511 DRNVVCWTAMVSAYGQHGFFGEALLYFQLM-QLQGEAPNKVTMAAVLTACSKVELEAD-- 567

Query: 492 SLHGLALKSLM---------GLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
                 LKS+M         G D    V NA ++++ +  +++ A  +F   +  N+ +W
Sbjct: 568 -----ELKSVMRVYRCCVELGQDRELVVGNAALSVHAKLGNLREAREIFSRMWTRNVVSW 622

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           N ++SA +Q         LFRH+  E    P+  + ++IL  C Q          HG + 
Sbjct: 623 NSILSACAQVGESRECRCLFRHMLLESDSRPDNYTFITILGVCKQ----SREDLTHGRIL 678

Query: 597 HLGFQENS-----FISSALLDMYSNCKS--NAA-------------WSSMISAYGYHGKG 636
           H   +E+S      +++AL+ MYS C S  +AA             W++MISA  ++G+ 
Sbjct: 679 HQLARESSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEF 738

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
               +LF  M +S + P   + +++L+AC+ +  ++ G + ++   E        E    
Sbjct: 739 QRVFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFS---EAVRAGFGAEVAAA 795

Query: 697 IVDMLGRSGKLQEAYE-FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE--LLFKLE 753
            +++ G+ GKL+ A E F+  +P +     W  + +A +H        +V E   L  ++
Sbjct: 796 GINLFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSGID 855

Query: 754 PENVGYYISLSNM 766
           P+ V +   LS +
Sbjct: 856 PDLVTFVSVLSTL 868



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 174/712 (24%), Positives = 316/712 (44%), Gaps = 61/712 (8%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QG +VH       + ++  L N  V MY  CG  + ++ +F  M     V W +++  
Sbjct: 62  LHQGLLVHARISNLALDSNVFLGNRLVVMYLACGRPDEAQRSFYKMPNRGPVPWTSMIGA 121

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG-KVIHALGIKLGYED 207
                +       F  M   G   D+ +L++ ++    L +     +++H++ ++ G  D
Sbjct: 122 LAREFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCGNLEDRGRASRLLHSIAVETG-RD 180

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S  + V  +L+SM    G    A + F G+  KDV +WNA++D +     + E   L  E
Sbjct: 181 SETI-VGTALVSMLPDFGH---ARQVFEGVLAKDVRTWNAMMDVYMRRFDYSEVLRLFQE 236

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M ++    PD ++ V  ++ C+    L +GR +H  AI +    D+ +  ++   YSK  
Sbjct: 237 MDVV----PDRSSFVKALNACSGLGDLEQGRVLHEQAIEKGFHADVRVEAAIFSLYSKGQ 292

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAIL 375
           +L   ++LFN     + +V W   ++   K+     +   F             TLL I+
Sbjct: 293 NL---DVLFNYAPHHDSVVLWTRRMAASTKQGHSATTMQYFGLMQLEGIKPDRVTLLTIV 349

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            + +    L  G+ +H    +LG       +NA+M+MY  CG L  A  +   I    D 
Sbjct: 350 DALDRSCFLAVGRMVHSHARELGLGGLASLMNAVMNMYARCGSLEEAVRVFAEI--RKDL 407

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I A     H++EAI  F+ M Q Q   PD +TL+ ++  C N +   + K +H 
Sbjct: 408 ISWNTIIGAYVHYAHYEEAINLFQQM-QLQGFLPDKITLLAMLKVCSNSKFFLKSKLIHA 466

Query: 496 ----LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQ 549
               L  +     DT V  AL+  Y +C  ++ A  VFE  S  + N+  W  M+SA+ Q
Sbjct: 467 CVVELGDERGYARDTFVATALLDTYSKCGRLEEARCVFETLSLGDRNVVCWTAMVSAYGQ 526

Query: 550 NKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV----LRHGKQIHGHVFHLGFQE 602
           +     AL  F+ ++ +   PN++++ ++L+AC+++ +    L+   +++     LG   
Sbjct: 527 HGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACSKVELEADELKSVMRVYRCCVELGQDR 586

Query: 603 NSFISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELF-HEM 646
              + +A L +++                 ++  +W+S++SA    G+  E   LF H +
Sbjct: 587 ELVVGNAALSVHAKLGNLREAREIFSRMWTRNVVSWNSILSACAQVGESRECRCLFRHML 646

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
             S  RP   + I++L  C  S       +  + +  E     +      +V M    G 
Sbjct: 647 LESDSRPDNYTFITILGVCKQSREDLTHGRILHQLARESSGSLDLIVATALVHMYSECGS 706

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           L++A      +  QP    W AM+SA SH+G+    ++V +L  +++   V 
Sbjct: 707 LEDAATTFGTIQ-QPDVVSWNAMISALSHYGEF---QRVFDLFQRMKDSKVA 754



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 158/608 (25%), Positives = 273/608 (44%), Gaps = 59/608 (9%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D   L  A AAS    +L  G ++HA    L  + + ++   N L+ MY  CG  + A+R
Sbjct: 48  DYAQLLDACAASK---DLHQGLLVHARISNLALDSNVFLG--NRLVVMYLACGRPDEAQR 102

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-S 291
           +F+ M  +  V W ++I   A    F  AF + H M L+  V PD  T+ T+IS+C +  
Sbjct: 103 SFYKMPNRGPVPWTSMIGALAREFHFHSAFSVFHTM-LLEGVPPDSPTLATVISVCGNLE 161

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
              R  R +H  A+      + ++  +L+   S       A  +F  +    D+ +WN+M
Sbjct: 162 DRGRASRLLHSIAVETGRDSETIVGTALV---SMLPDFGHARQVFEGVLA-KDVRTWNAM 217

Query: 352 IS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           +              LF+EM  +  + SF   +  L +C+    LE G+ +H   ++ GF
Sbjct: 218 MDVYMRRFDYSEVLRLFQEMDVVPDRSSF---VKALNACSGLGDLEQGRVLHEQAIEKGF 274

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +     A+  +Y    +L   F+      H+     W   + A T+ GH    ++ F 
Sbjct: 275 HADVRVEAAIFSLYSKGQNLDVLFNY---APHHDSVVLWTRRMAASTKQGHSATTMQYFG 331

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M Q +   PD VTL+ ++ A         G+ +H  A +  +G    + NA++ MY RC
Sbjct: 332 LM-QLEGIKPDRVTLLTIVDALDRSCFLAVGRMVHSHARELGLGGLASLMNAVMNMYARC 390

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
             ++ A  VF      +L +WN +I A+        A+ LF+ ++   F P++I+++++L
Sbjct: 391 GSLEEAVRVFAEIRK-DLISWNTIIGAYVHYAHYEEAINLFQQMQLQGFLPDKITLLAML 449

Query: 577 SACTQLGVLRHGKQIHGHVFHL----GFQENSFISSALLDMYSNC--------------- 617
             C+        K IH  V  L    G+  ++F+++ALLD YS C               
Sbjct: 450 KVCSNSKFFLKSKLIHACVVELGDERGYARDTFVATALLDTYSKCGRLEEARCVFETLSL 509

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             ++   W++M+SAYG HG   EA+  F  M   G  P K ++ ++L+ACS   L  + L
Sbjct: 510 GDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACSKVELEADEL 569

Query: 676 QYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           +    +     E     E       + +  + G L+EA E    +  +     W ++LSA
Sbjct: 570 KSVMRVYRCCVELGQDRELVVGNAALSVHAKLGNLREAREIFSRMWTRNVVS-WNSILSA 628

Query: 733 CSHHGDTK 740
           C+  G+++
Sbjct: 629 CAQVGESR 636



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/509 (22%), Positives = 222/509 (43%), Gaps = 51/509 (10%)

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           H   + R  E        L+  CA S  L +G  VH       L  ++ + N L+  Y  
Sbjct: 34  HGSSVERRAEISPDDYAQLLDACAASKDLHQGLLVHARISNLALDSNVFLGNRLVVMYLA 93

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF-------------STLL 372
                +A+  F  + P    V W SMI  L +E  +  S FS               TL 
Sbjct: 94  CGRPDEAQRSFYKM-PNRGPVPWTSMIGALARE-FHFHSAFSVFHTMLLEGVPPDSPTLA 151

Query: 373 AILPSCNSPESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS-LLQRIS 430
            ++  C + E      + +H   ++ G  + TI   AL+ M  + G     F  +L +  
Sbjct: 152 TVISVCGNLEDRGRASRLLHSIAVETGRDSETIVGTALVSMLPDFGHARQVFEGVLAK-- 209

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D   WN ++    +   + E ++ F    Q+ +  PD  + V  ++AC  L    +G
Sbjct: 210 ---DVRTWNAMMDVYMRRFDYSEVLRLF----QEMDVVPDRSSFVKALNACSGLGDLEQG 262

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQ 549
           + LH  A++     D RV+ A+ ++Y + +++     +F  + ++ ++  W   ++A ++
Sbjct: 263 RVLHEQAIEKGFHADVRVEAAIFSLYSKGQNL---DVLFNYAPHHDSVVLWTRRMAASTK 319

Query: 550 NKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
                  ++ F  ++ E   P+ +++++I+ A  +   L  G+ +H H   LG    + +
Sbjct: 320 QGHSATTMQYFGLMQLEGIKPDRVTLLTIVDALDRSCFLAVGRMVHSHARELGLGGLASL 379

Query: 607 SSALLDMYSNC--------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            +A+++MY+ C              K   +W+++I AY ++    EAI LF +M   G  
Sbjct: 380 MNAVMNMYARCGSLEEAVRVFAEIRKDLISWNTIIGAYVHYAHYEEAINLFQQMQLQGFL 439

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR---PETEHHVCIVDMLGRSGKLQE 709
           P K +++++L  CS+S    +    +  ++E  D R    +T     ++D   + G+L+E
Sbjct: 440 PDKITLLAMLKVCSNSKFFLKSKLIHACVVELGDERGYARDTFVATALLDTYSKCGRLEE 499

Query: 710 AYEFIKNLPIQPKPGV-WGAMLSACSHHG 737
           A    + L +  +  V W AM+SA   HG
Sbjct: 500 ARCVFETLSLGDRNVVCWTAMVSAYGQHG 528



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 19/289 (6%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV------ENRCVVMGLHF 60
           L    + L+ ++ +     +  +F     ++VV+WN++++AC       E RC+     F
Sbjct: 588 LVVGNAALSVHAKLGNLREAREIFSRMWTRNVVSWNSILSACAQVGESRECRCL-----F 642

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              ++E   R D+ T + I+    Q    L  GR++H L+ ++    D  +    V+MY+
Sbjct: 643 RHMLLESDSRPDNYTFITILGVCKQSREDLTHGRILHQLARESSGSLDLIVATALVHMYS 702

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CG L  +  TF  +   D VSWN ++S   H    ++    F+ M  S    D+++  +
Sbjct: 703 ECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEFQRVFDLFQRMKDSKVAPDSLTFVA 762

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A     EL  G+ + +  ++ G+       V  + I+++ +CG +EAA   F  +  
Sbjct: 763 VLNACTANSELELGQRVFSEAVRAGFG----AEVAAAGINLFGKCGKLEAAVETFLTLVP 818

Query: 240 --KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
             K +++WN +    A   +  E   +L  M+L   ++PD+ T V+++S
Sbjct: 819 HEKSLLAWNGLATALAHGARPSEVIRVLECMRL-SGIDPDLVTFVSVLS 866



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 28/294 (9%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  +T+L+  YS     E +   F      DVV+WNAMI+A             F  M +
Sbjct: 691 LIVATALVHMYSECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEFQRVFDLFQRMKD 750

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
             +  DS T + +++A T  + L+ G+ V   +++AG  A+ +     +N++ KCG L +
Sbjct: 751 SKVAPDSLTFVAVLNACTANSELELGQRVFSEAVRAGFGAEVAAAG--INLFGKCGKLEA 808

Query: 127 SECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-------SL 177
           +  TF  +  H    ++WN + +   H   P + +     M  SG   D V       +L
Sbjct: 809 AVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSGIDPDLVTFVSVLSTL 868

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           S A    AC  +LS     H L        +P  +    +I +  + G ++ AE      
Sbjct: 869 SHAGFVEACCYQLSSMSTDHGL--------TPSATHYCCVIDVLGRAGLLDEAEEMLSSS 920

Query: 238 TCKD-------VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
                      VV W + +    ++G  E     + E  L R  E D AT V L
Sbjct: 921 RSSGGSGDDPLVVLWTSFLAACGIHGDSERGKRAV-ERILARQPE-DAATYVVL 972


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 180/524 (34%), Positives = 285/524 (54%), Gaps = 45/524 (8%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMI 352
           L+    +H   +       L  +N+L+  Y+K  S+    LLFN    P  ++V+W ++I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 353 SGL------FKEMLYL---------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           + L      F+ + +           + F+FS   AILP+C     L  G+ IH    K 
Sbjct: 173 NQLSRSNKPFQALTFFNRMRTTGIYPNHFTFS---AILPACAHAALLSEGQQIHALIHKH 229

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            F N+     AL+ MY  CG ++ A ++   + H +  S WN +IV   +N  +  AI  
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVS-WNSMIVGFVKNKLYGRAIGV 288

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHG-LALKSLMGLDTRVQNALITM 515
           F+ +    +  PD V++ +V+SAC  L EL F GK +HG +  + L+GL   V+N+L+ M
Sbjct: 289 FREVL---SLGPDQVSISSVLSACAGLVELDF-GKQVHGSIVKRGLVGL-VYVKNSLVDM 343

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISI 572
           Y +C   + A+ +F    + ++ TWN MI    + +   +A   F+ +     EP+E S 
Sbjct: 344 YCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASY 403

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN------------ 620
            S+  A   +  L  G  IH HV   G  +NS ISS+L+ MY  C S             
Sbjct: 404 SSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKE 463

Query: 621 ---AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
                W++MI+ +  HG   EAI+LF EM N G+ P   + +S+LSACSH+G +D+G +Y
Sbjct: 464 HNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKY 523

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +N+M   ++++P  EH+ C+VD+LGR G+L+EA  FI+++P +P   VWGA+L AC  H 
Sbjct: 524 FNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHA 583

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + +MG++VAE LFKLEP+N G Y+ LSN+Y+  G  ++A E+ +
Sbjct: 584 NVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRR 627



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 236/528 (44%), Gaps = 52/528 (9%)

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT--VSW 142
           ++  LK    +H   +     A  +  N  + +YAKCG ++ +   F+      T  V+W
Sbjct: 109 KLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTW 168

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
            T+++    +N P + L +F  M  +G   ++ + S+ + A A    LS G+ IHAL  K
Sbjct: 169 TTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHK 228

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
             + + P+V+   +L+ MY++CG +  AE  F  M  +++VSWN++I GF  N  +  A 
Sbjct: 229 HCFLNDPFVAT--ALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAI 286

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            +  E+    S+ PD  ++ +++S CA  + L  G+ VHG  ++R L   + + NSL+D 
Sbjct: 287 GVFREVL---SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDM 343

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF--KEMLYLCSQFSFSTLLAILP---- 376
           Y K      A  LF       D+V+WN MI G F  +     C+ F       + P    
Sbjct: 344 YCKCGLFEDATKLFCGGGD-RDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEAS 402

Query: 377 ------SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
                 +  S  +L  G  IH   LK G   N+   ++L+ MY  CG ++ A+ +  R +
Sbjct: 403 YSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF-RET 461

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              +  CW  +I    Q+G   EAIK F+ M   +   P+ +T V+V+SAC +      G
Sbjct: 462 KEHNVVCWTAMITVFHQHGCANEAIKLFEEML-NEGVVPEYITFVSVLSACSH-----TG 515

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K   G    + M                  +IK             L  + CM+    + 
Sbjct: 516 KIDDGFKYFNSM--------------ANVHNIKPG-----------LEHYACMVDLLGRV 550

Query: 551 KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
                A      + FEP+ +   ++L AC +   +  G+++   +F L
Sbjct: 551 GRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKL 598



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 230/512 (44%), Gaps = 30/512 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           A L    +LL  Y+       +L LF  Y   + +VVTW  +I     +      L FF 
Sbjct: 130 ASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFN 189

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   GI  +  T   I+ A      L +G+ +H L  K   + D  +    ++MYAKCG
Sbjct: 190 RMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCG 249

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +  +E  F  M   + VSWN+++ G + N    + +  FRE+   G   D VS+SS ++
Sbjct: 250 SMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLS 307

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L EL +GK +H   +K G     YV   NSL+ MY +CG  E A + F G   +DV
Sbjct: 308 ACAGLVELDFGKQVHGSIVKRGLVGLVYVK--NSLVDMYCKCGLFEDATKLFCGGGDRDV 365

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V+WN +I G      FE+A      M +   VEPD A+  +L    A    L +G  +H 
Sbjct: 366 VTWNVMIMGCFRCRNFEQACTYFQAM-IREGVEPDEASYSSLFHASASIAALTQGTMIHS 424

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--------- 353
           + ++     +  + +SL+  Y K  S+  A  +F      N +V W +MI+         
Sbjct: 425 HVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHN-VVCWTAMITVFHQHGCAN 483

Query: 354 ---GLFKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTIG 405
               LF+EML       + T +++L +C+    ++     F    +   +K G  +    
Sbjct: 484 EAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACM 543

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           V+ L  +    G L  A   ++ +    D+  W  ++ AC ++ + +   +  + + + +
Sbjct: 544 VDLLGRV----GRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLE 599

Query: 466 NASPDSVTLV-NVISACGNLELAFEGKSLHGL 496
             +P +  L+ N+    G LE A E + L G+
Sbjct: 600 PDNPGNYMLLSNIYIRHGMLEEADEVRRLMGI 631



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 189/431 (43%), Gaps = 21/431 (4%)

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS-FSTLLAILPSCNSPES 383
           K N+ SK    F  + PM+  V++   +   ++  +    QFS    L  +L +    +S
Sbjct: 53  KENARSKPNSNFEGLGPMSREVAFWLQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKS 112

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVI 442
           L+    IH   +      +   +N L+ +Y  CG +     L     H S +   W  +I
Sbjct: 113 LKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLI 172

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
              +++    +A+  F  M +     P+  T   ++ AC +  L  EG+ +H L  K   
Sbjct: 173 NQLSRSNKPFQALTFFNRM-RTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCF 231

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
             D  V  AL+ MY +C  +  A  VF+   + NL +WN MI  F +NK   RA+ +FR 
Sbjct: 232 LNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFRE 291

Query: 563 -LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
            L   P+++SI S+LSAC  L  L  GKQ+HG +   G     ++ ++L+DMY  C    
Sbjct: 292 VLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFE 351

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      +    W+ MI          +A   F  M   G+ P ++S  SL  A +
Sbjct: 352 DATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASA 411

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
               + +G   ++++L+   V+  +     +V M G+ G + +AY+  +    +     W
Sbjct: 412 SIAALTQGTMIHSHVLKTGHVK-NSRISSSLVTMYGKCGSMLDAYQVFRETK-EHNVVCW 469

Query: 727 GAMLSACSHHG 737
            AM++    HG
Sbjct: 470 TAMITVFHQHG 480



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/369 (21%), Positives = 153/369 (41%), Gaps = 29/369 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG +  +    SL+  Y     FE +  LF    ++DVVTWN MI  C   R       +
Sbjct: 328 RGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTY 387

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ EG+  D  +   +  A   +  L QG ++H   +K G + +S + +  V MY K
Sbjct: 388 FQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGK 447

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  +   F      + V W  +++    +    + +  F EM   G   + ++  S 
Sbjct: 448 CGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSV 507

Query: 181 VAASACLGELSYG-KVIHALG----IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           ++A +  G++  G K  +++     IK G E          ++ +  + G +E A R   
Sbjct: 508 LSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYA------CMVDLLGRVGRLEEACRFIE 561

Query: 236 GMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
            M  + D + W A++     +   E   ++    + +  +EPD      L+S    ++ +
Sbjct: 562 SMPFEPDSLVWGALLGACGKHANVEMGREV---AERLFKLEPDNPGNYMLLS----NIYI 614

Query: 295 REGRSVHGYAIRRLLGYD----------LLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           R G       +RRL+G +          + + N    F +   S S+ + ++  +  + +
Sbjct: 615 RHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKE 674

Query: 345 LVSWNSMIS 353
           L+     ++
Sbjct: 675 LIKRRGYVA 683


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 318/615 (51%), Gaps = 50/615 (8%)

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K G++   ++   N+LI++Y + GD  +A + F  M  ++ V+W  +I G+  NG  E+
Sbjct: 27  LKHGFDSDLFL--CNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPED 84

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLG-YDLLMMNS 318
           A  +L EM +     P+     + I  C +S+L  R+GR VHGYAIR  L    + + N 
Sbjct: 85  ACGVLKEM-IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNG 143

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST-------- 370
           L++ Y+K   +  A  +F  +    D VSWNSMI+GL +   +  +  S+++        
Sbjct: 144 LINMYAKCGDIDHARSVFGLMVD-KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 371 ----LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV---AAF 423
               L++ L SC S   +  G+  H   +KLG   +    N L+ +Y     L      F
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 424 S-LLQRISHNSDTSCWNIVIVACTQNG-HFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           S +L+R     D   WN VI A   +G    EAI+ F  M  +   SP+ VT +N+++  
Sbjct: 263 SWMLER-----DQVSWNTVIGALADSGASVSEAIEVFLEM-MRAGWSPNRVTFINLLATV 316

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTW 540
            +L  +     +H L LK  +  D  ++NAL+  YG+  ++++   +F       +  +W
Sbjct: 317 SSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSW 376

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFH 597
           N MIS +  N+   +A++L   +      +   +  ++LSAC  +  L  G ++H     
Sbjct: 377 NSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIR 436

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
              + +  I SAL+DMYS C               ++  +W+SMIS Y  HG G  A+ L
Sbjct: 437 ACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRL 496

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F  M  SG  P   + + +LSACSH GLVDEG +Y+ +M E Y + P  EH+ C+VD+LG
Sbjct: 497 FTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLG 556

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC--SHHGDTKMGKQVAELLFKLEPENVGYY 760
           R+G+L +   FI  +PI+P   +W  +L AC   +   T++G++ AE+LF ++P+N   Y
Sbjct: 557 RAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNY 616

Query: 761 ISLSNMYVALGRWKD 775
           + LSNMY + G+W+D
Sbjct: 617 VLLSNMYASGGKWED 631



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 246/514 (47%), Gaps = 25/514 (4%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           + H   +K G  +D  LCN  +N+Y + GD  S+   F  M   + V+W  ++SG   N 
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY---GKVIHALGIKLGYEDSPY 210
            PE      +EM + G   +  +  SA+   AC   + +   G+ +H   I+ G  D+  
Sbjct: 81  MPEDACGVLKEMIFEGFLPNRFAFGSAI--RACQESMLWRRKGRQVHGYAIRTGLNDAK- 137

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+V N LI+MY++CGDI+ A   F  M  KD VSWN++I G   N  FE+A    + M+ 
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMR- 196

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + P    +++ +S CA    +  G+  HG  I+  L  D+ + N+L+  Y++++ L+
Sbjct: 197 KTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLA 256

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYLCSQFSFSTLLAILPS 377
           + + +F+ +    D VSWN++I  L             F EM+      +  T + +L +
Sbjct: 257 ECQKVFSWMLE-RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
            +S  + +    IH   LK    ++    NAL+  Y   G++     +  R+S   D   
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I     N    +A+     M  Q+    D  T   V+SAC  +     G  +H  A
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLM-MQRGQRLDCFTFATVLSACATVATLECGMEVHACA 434

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +++ +  D  + +AL+ MY +C  I  AS  F      NL +WN MIS ++++     AL
Sbjct: 435 IRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNAL 494

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
            LF  ++     P+ I+ V +LSAC+ +G++  G
Sbjct: 495 RLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 158/583 (27%), Positives = 281/583 (48%), Gaps = 34/583 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L    +L+  Y  +    S+  LF E  +++ VTW  +I+   +N          
Sbjct: 30  GFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVL 89

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYA 119
            EM+ EG   +       + A  + M   ++GR VH  +I+ G+  A  ++ N  +NMYA
Sbjct: 90  KEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYA 149

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGD++ +   F  M   D+VSWN++++G   N   E  +  +  M  +G    N +L S
Sbjct: 150 KCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALIS 209

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A+++ A LG +  G+  H  GIKLG +    VSV+N+L+++Y++   +   ++ F  M  
Sbjct: 210 ALSSCASLGCILLGQQTHGEGIKLGLDMD--VSVSNTLLALYAETSRLAECQKVFSWMLE 267

Query: 240 KDVVSWNAIIDGFALNG-KFEEAFDLLHEMQLMRSV-EPDIATVVTLISLCADSLLLREG 297
           +D VSWN +I   A +G    EA ++  EM  MR+   P+  T + L++  +     +  
Sbjct: 268 RDQVSWNTVIGALADSGASVSEAIEVFLEM--MRAGWSPNRVTFINLLATVSSLSTSKLS 325

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
             +H   ++  +  D  + N+L+  Y KS  +   E +F+ ++   D VSWNSMISG   
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385

Query: 358 --------EMLYLCSQ-------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                   ++++L  Q       F+F+T   +L +C +  +LE G  +H   ++    ++
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFAT---VLSACATVATLECGMEVHACAIRACLESD 442

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            +  +AL+ MY  CG +  A      +   +  S WN +I    ++GH   A++ F  M 
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYS-WNSMISGYARHGHGDNALRLFTRM- 500

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCR 520
           +     PD +T V V+SAC ++ L  EG      ++  + GL  RV++   ++ + GR  
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFK-SMTEVYGLVPRVEHYSCMVDLLGRAG 559

Query: 521 DI-KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           ++ K  + + +     N+  W  ++ A  +     R  EL R 
Sbjct: 560 ELDKIENFINKMPIKPNILIWRTVLGACCRGNG--RKTELGRR 600



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 139/522 (26%), Positives = 240/522 (45%), Gaps = 31/522 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A +     L+  Y+     + + ++F    +KD V+WN+MIT   +N+C    +  +  M
Sbjct: 136 AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSM 195

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
            + G+   +  L+  +S+   + C+  G+  H   IK G+  D S+ N  + +YA+   L
Sbjct: 196 RKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRL 255

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYP-EKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +  FS M   D VSWNT++     +     + +  F EM  +G   + V+  + +A 
Sbjct: 256 AECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDV 242
            + L        IHAL +K   +D    ++ N+L++ Y + G++E  E  F  M+  +D 
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDN--AIENALLACYGKSGEMENCEEIFSRMSERRDE 373

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN++I G+  N    +A DL+  M + R    D  T  T++S CA    L  G  VH 
Sbjct: 374 VSWNSMISGYIHNELLCKAMDLVWLM-MQRGQRLDCFTFATVLSACATVATLECGMEVHA 432

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE---- 358
            AIR  L  D+++ ++L+D YSK   +  A   FN + P+ +L SWNSMISG  +     
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFN-LMPVRNLYSWNSMISGYARHGHGD 491

Query: 359 -MLYLCSQFSFS-------TLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTIGV 406
             L L ++   S       T + +L +C+      E  E+ KS+       G        
Sbjct: 492 NALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSM---TEVYGLVPRVEHY 548

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ-NGHFQEAIKTFKSM---T 462
           + ++ +    G+L    + + ++    +   W  V+ AC + NG   E  +    M    
Sbjct: 549 SCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNM 608

Query: 463 QQQNASPDSVTLVNVISACGNLE-LAFEGKSLHGLALKSLMG 503
             QNA  + V L N+ ++ G  E +A   +++   A+K   G
Sbjct: 609 DPQNAV-NYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAG 649



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 95/455 (20%), Positives = 199/455 (43%), Gaps = 39/455 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETC-NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +LL  Y      E+   +F      +D V+WN+MI+  + N  +   +     M++ G R
Sbjct: 346 ALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQR 405

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T   ++SA   +  L+ G  VH  +I+A + +D  + +  V+MY+KCG ++ +   
Sbjct: 406 LDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRF 465

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ M   +  SWN+++SG   + + +  L  F  M  SG+  D+++    ++A + +G +
Sbjct: 466 FNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLV 525

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
             G   +   +   Y   P V   + ++ +  + G+++  E     M  K +++ W  ++
Sbjct: 526 DEG-FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584

Query: 250 DGFAL-NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS-----LLLREGRSVHGY 303
                 NG+  E      EM  + +++P  A    L+S    S      + R  R++   
Sbjct: 585 GACCRGNGRKTELGRRAAEM--LFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREA 642

Query: 304 AIRRLLGYD-LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
           A+++  G   + M + +  F +  NS  +  L++  +  ++  +     +  +       
Sbjct: 643 AVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQI------- 695

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF---SNNTIGVNALMHMYINCGDL 419
             +F+   L         PE+ E   S H  +L + F    N+ + +  + ++ + CGD 
Sbjct: 696 --KFALYDL--------EPENKEELLSYHSEKLAVAFVLTRNSGLPIRIMKNLRV-CGDC 744

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            +AF  + ++   S      IV+    +  HF++ 
Sbjct: 745 HSAFKYISKVVDRS------IVLRDSNRFHHFEDG 773


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 274/513 (53%), Gaps = 34/513 (6%)

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + +H   +   L +   ++  L+   S    ++ A  +F+ + P   +  WN++I G   
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL-PRPQIFPWNAIIRGYSR 96

Query: 356 ---FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
              F++ L + S    +       T   +L +C+    L+ G+ +H    +LGF  +   
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            N L+ +Y  C  L +A ++ + +     T   W  ++ A  QNG   EA++ F  M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-RK 215

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +  PD V LV+V++A   L+   +G+S+H   +K  + ++  +  +L TMY +C  + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  +F+   + NL  WN MIS +++N     A+++F  +   +  P+ ISI S +SAC Q
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           +G L   + ++ +V    ++++ FISSAL+DM++ C               +    WS+M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I  YG HG+  EAI L+  M   G+ P   + + LL AC+HSG+V EG  ++N M  ++ 
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHK 454

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P+ +H+ C++D+LGR+G L +AYE IK +P+QP   VWGA+LSAC  H   ++G+  A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + LF ++P N G+Y+ LSN+Y A   W    E+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 214/461 (46%), Gaps = 28/461 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L+ A S+      +  +F +     +  WNA+I     N      L  +  M    + 
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS T   ++ A + ++ L+ GR VH    + G  AD  + N  + +YAKC  L S+   
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176

Query: 131 FSGMHCADT--VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F G+   +   VSW  I+S    N  P + L  F +M     + D V+L S + A  CL 
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ IHA  +K+G E  P + +  SL +MY++CG +  A+  F  M   +++ WNA+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A NG   EA D+ HEM + + V PD  ++ + IS CA    L + RS++ Y  R  
Sbjct: 295 ISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              D+ + ++L+D ++K  S+  A L+F+      D+V W++MI G            L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLY 412

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-----LMH 411
           + M       +  T L +L +CN    +  G     W      +++ I         ++ 
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREG-----WWFFNRMADHKINPQQQHYACVID 467

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           +    G L  A+ +++ +      + W  ++ AC ++ H +
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI  DS    +I SA T    LKQ   +H   +  G+     L    ++  +  GD+  +
Sbjct: 17  GIHSDSFYASLIDSA-THKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +       WN I+ G   NN+ +  LL +  M  +    D+ +    + A + L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSW 245
             L  G+ +HA   +LG++    V V N LI++Y++C  + +A   F G+    + +VSW
Sbjct: 133 SHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            AI+  +A NG+  EA ++  +M+ M  V+PD   +V++++       L++GRS+H   +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +  L  +  ++ SL   Y+K   ++ A++LF+ +   N L+ WN+MISG           
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN-LILWNAMISGYAKNGYAREAI 308

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            +F EM+    +    ++ + + +C    SLE  +S++ +  +  + ++    +AL+ M+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +  R + + D   W+ +IV    +G  +EAI  +++M ++    P+ VT
Sbjct: 369 AKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVT 426

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC- 532
            + ++ AC +  +  EG           +    +    +I + GR   +  A  V +   
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486

Query: 533 YNCNLCTWNCMISAFSQNK----AEVRALELF 560
               +  W  ++SA  +++     E  A +LF
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 179/378 (47%), Gaps = 5/378 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A +     L+  Y+      S+  +F       + +V+W A+++A  +N   +  L 
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F +M +  ++ D   L+ +++A T +  LKQGR +H   +K G+  +  L      MYA
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG + +++  F  M   + + WN ++SG   N Y  + +  F EM     + D +S++S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A++A A +G L   + ++    +  Y D  ++S  ++LI M+++CG +E A   F     
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGARLVFDRTLD 386

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DVV W+A+I G+ L+G+  EA  L   M+    V P+  T + L+  C  S ++REG  
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
                    +         ++D   ++  L +A  +   +     +  W +++S   K  
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505

Query: 360 LYLCSQFSFSTLLAILPS 377
                +++   L +I PS
Sbjct: 506 HVELGEYAAQQLFSIDPS 523


>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Brachypodium distachyon]
          Length = 594

 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 170/567 (29%), Positives = 291/567 (51%), Gaps = 39/567 (6%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N+++  +   G + EA  L   M+       D  T       C    L R GR+VH  A+
Sbjct: 11  NSLLRSYTGLGHYREAVALYSGMRSF-----DHLTFPFAAKACGGLRLSRHGRAVHCRAL 65

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
               G D  + N+L+  Y     ++ AE +F A+     +VSWN++I+G           
Sbjct: 66  AAGFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRT-VVSWNAVIAGCVKNDCAERAL 124

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            +F EM    ++   +T++++LP+C   ++L  G+++H    + G ++     NAL+ MY
Sbjct: 125 EVFGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVKNALIDMY 184

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS-PDSV 472
             C +L  A  +     ++ D   W ++I A   N H +EA      M     A  P+ V
Sbjct: 185 GKCRNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGV 244

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T+  ++SAC  L      K +H + ++  +  D  V+ AL+  Y +C ++K      E+ 
Sbjct: 245 TMAYLLSACSRLS-GRHAKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMMELTLENG 303

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
                 TWN  IS ++ N+ E +A+EL + +  E   P+  ++ SIL A  +   +R   
Sbjct: 304 SR-RTETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQAT 362

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            IH ++  LGF  ++ I++ L+++Y+                 K   AW+++I+ YG HG
Sbjct: 363 NIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVIAGYGMHG 422

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           +   +I L++ M   G++P   +  SLL ACSH G+VDEGLQ + +M   + V P  +H+
Sbjct: 423 QAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIHGVMPNADHY 482

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
             +VDM+GR+G+++EAY  I+++P++P   VWGA+L AC  H + K G+  A+ LF+LEP
Sbjct: 483 SSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVAAKHLFELEP 542

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
           +N G ++ L N+Y A  RW D  ++ +
Sbjct: 543 KNTGNHVLLGNIYAAADRWSDVQDVRR 569



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 163/539 (30%), Positives = 255/539 (47%), Gaps = 41/539 (7%)

Query: 57  GLHFFGEMVE--EGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
           GL  + E V    G+R FD  T      A   +   + GR VHC ++ AG   D+ + N 
Sbjct: 19  GLGHYREAVALYSGMRSFDHLTFPFAAKACGGLRLSRHGRAVHCRALAAGFGDDTYVQNA 78

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            ++MY  CGD+ ++E  F  M     VSWN +++GC+ N+  E+ L  F EM   G + D
Sbjct: 79  LISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVKNDCAERALEVFGEMAGDGTEID 138

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             ++ S + A A    LS G+ +H L  + G  D  Y +V N+LI MY +C ++E A + 
Sbjct: 139 RATVVSVLPACAQAKNLSIGRAVHQLVEERGLAD--YAAVKNALIDMYGKCRNLEGARKV 196

Query: 234 FWGMTC-KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADS 291
           F      KDVVSW  +I  + LN   EEAF L HEM +      P+  T+  L+S C+  
Sbjct: 197 FDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGVTMAYLLSACS-R 255

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           L  R  + +H   IR  L  D+++  +LMD Y+K +++   EL     +   +  +WN+ 
Sbjct: 256 LSGRHAKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMMELTLENGSRRTE--TWNAT 313

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           ISG            L K M+   ++   +T+ +ILP+      +    +IHC+ L LGF
Sbjct: 314 ISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAESADVRQATNIHCYLLTLGF 373

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             +T     L+++Y   GDL  ++SL   +    D   W  VI     +G  Q +I  + 
Sbjct: 374 LRSTEITTGLINVYAKAGDLDVSWSLFDGLPEK-DVVAWTTVIAGYGMHGQAQTSILLYN 432

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-----LIT 514
            M  Q    P++VT  +++ AC ++ +  EG  L     + + G+   + NA     L+ 
Sbjct: 433 RMV-QLGVKPNTVTFASLLYACSHVGMVDEGLQL----FEDMRGIHGVMPNADHYSSLVD 487

Query: 515 MYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPN 568
           M GR   I+ A  + E      +   W  ++ A   +K     EV A  LF   E EP 
Sbjct: 488 MVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVAAKHLF---ELEPK 543



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 223/476 (46%), Gaps = 36/476 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L++ Y       ++ A+F    N+ VV+WNA+I  CV+N C    L  F
Sbjct: 68  GFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVKNDCAERALEVF 127

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           GEM  +G   D  T++ ++ A  Q   L  GR VH L  + G+   +++ N  ++MY KC
Sbjct: 128 GEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVKNALIDMYGKC 187

Query: 122 GDLNSSECTFSG-MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            +L  +   F    +  D VSW  ++   + N++ E+      EM  +        ++ A
Sbjct: 188 RNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGAPWPNGVTMA 247

Query: 181 VAASACLGELS--YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
              SAC   LS  + K +HA+ I+LG E    + V  +L+  Y++C +++  E      +
Sbjct: 248 YLLSAC-SRLSGRHAKCMHAMCIRLGLESD--IIVETALMDAYAKCHNMKMMELTLENGS 304

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +   +WNA I G+  N + ++A +LL  M +  S  PD AT+ +++   A+S  +R+  
Sbjct: 305 -RRTETWNATISGYTHNEQEKKAIELLKRM-IAESARPDSATMASILPAYAESADVRQAT 362

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           ++H Y +         +   L++ Y+K+  L  +  LF+ + P  D+V+W ++I+G    
Sbjct: 363 NIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGL-PEKDVVAWTTVIAGYGMH 421

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGF 399
                   L+  M+ L  + +  T  ++L +C+    ++ G       + IH      G 
Sbjct: 422 GQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIH------GV 475

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQE 453
             N    ++L+ M    G +  A+ L++ +     TS W  ++ AC   +N  F E
Sbjct: 476 MPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGE 531


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 209/737 (28%), Positives = 341/737 (46%), Gaps = 102/737 (13%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGC-- 149
           G+  H   I         + N  + MY KC DL  +   F GM   DTVSWN ++ G   
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAG 120

Query: 150 ---------LHNNYP-EKC----LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
                    L +  P   C    L  FR MG  G   D  + +  + + + L +   G  
Sbjct: 121 RGDIGVAQKLFDAMPGTGCGVVELFDFR-MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ 179

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH L +K+G++    V   ++L+ MY++C              C               N
Sbjct: 180 IHGLAVKMGFDCD--VVTGSALLDMYAKC--------------C-------------VQN 210

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
                  +L  EMQ         A V  L               +HG+A++   G D+++
Sbjct: 211 DDLRGGLELFKEMQK--------AGVGAL--------------QLHGHALKTDFGTDVVI 248

Query: 316 MNSLMDFYSKSNSLSK-AELLFNAIAPMNDLVSWNSMISGLFKE--------MLYLCSQF 366
             + +D Y K N+LS  +  LFN++ P ++L S+N++I G  +         M  L  + 
Sbjct: 249 GTATLDMYMKCNNLSDCSNQLFNSL-PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKS 307

Query: 367 SFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
                  +L     +C   +    G  +H   +K    +N    NA++ MY  CG LV A
Sbjct: 308 GLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEA 367

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             + + +  + D   WN +I A  QNG+ ++ +  F  M  Q    PD  T  +V+ AC 
Sbjct: 368 CLVFEEMV-SRDAVSWNAIIAAHEQNGNEEKTLSLFVWML-QSGMEPDEFTYGSVLKACA 425

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
             +    G  +H   +KS MGLD+ V  ALI MY +C  ++ A  + +      + +WN 
Sbjct: 426 GWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNA 485

Query: 543 MISAFSQNKAEVRALELF-RHLEF--EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +IS FS  K    A + F + LE   +P+  +  +IL  C  L  +  GKQIH  +    
Sbjct: 486 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE 545

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
            Q +++ISS L+DMYS C               +    W++M+  Y  HG G EA+++F 
Sbjct: 546 LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFE 605

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            M    ++P  ++ +++L AC H GLV++GL Y+++ML  Y + P+ EH+ C+VD++GRS
Sbjct: 606 YMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRS 665

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G++ +A E I+ +P +    +W  +LS C  HG+ ++ ++ A  + +LEPE+   Y+ LS
Sbjct: 666 GQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 725

Query: 765 NMYVALGRWKDAVEIGK 781
           N+Y   G W +  ++ K
Sbjct: 726 NIYANAGMWNEVTKLRK 742



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 171/652 (26%), Positives = 280/652 (42%), Gaps = 96/652 (14%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMI----------------TACVENRCVVM 56
           L+  Y   S    +  +F     +D V+WNAM+                 A     C V+
Sbjct: 83  LIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVV 142

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L  F  M   G  FD TT  +++ + + +     G  +H L++K G   D    +  ++
Sbjct: 143 ELFDF-RMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLD 201

Query: 117 MYAKC----GDL-----------------------------------------------N 125
           MYAKC     DL                                               N
Sbjct: 202 MYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNN 261

Query: 126 SSECT---FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            S+C+   F+ +   +  S+N I+ G   ++   + L  FR +  SG   D VSLS A  
Sbjct: 262 LSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXR 321

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A +     G  +H L +K   + +  + V N+++ MY +CG +  A   F  M  +D 
Sbjct: 322 ACAVIKGDLEGLQVHGLSMKSLCQSN--ICVANAILDMYGKCGALVEACLVFEEMVSRDA 379

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWNAII     NG  E+   L   M L   +EPD  T  +++  CA    L  G  +H 
Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWM-LQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN 438

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
             I+  +G D  +  +L+D YSK   + KAE L + +A    +VSWN++ISG   +    
Sbjct: 439 RIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT-VVSWNAIISGFSLQKQSE 497

Query: 363 CSQFSFSTLL------------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
            +Q +FS +L             IL +C +  ++E GK IH   +K    ++    + L+
Sbjct: 498 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLV 557

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG++   F L+   + N D   WN ++    Q+G  +EA+K F+ M Q +N  P+
Sbjct: 558 DMYSKCGNM-QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM-QLENVKPN 615

Query: 471 SVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGRCRDIKSAST 527
             T + V+ ACG++ L  +G  LH   ++ S  GLD ++++   ++ + GR   +  A  
Sbjct: 616 HATFLAVLRACGHMGLVEKG--LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 673

Query: 528 VFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           + E   +  +   W  ++S        EV     +  L+ EP + +   +LS
Sbjct: 674 LIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLS 725



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 217/468 (46%), Gaps = 18/468 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF    N ++ ++NA+I     +   +  L  F  + + G+  D  +L     A   +  
Sbjct: 269 LFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKG 328

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
             +G  VH LS+K+   ++  + N  ++MY KCG L  +   F  M   D VSWN I++ 
Sbjct: 329 DLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA 388

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N   EK L  F  M  SG + D  +  S + A A    L+ G  IH   IK      
Sbjct: 389 HEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLD 448

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V +  +LI MYS+CG +E AE+    +  + VVSWNAII GF+L  + EEA     +M
Sbjct: 449 SFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 506

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   V+PD  T  T++  CA+ + +  G+ +H   I++ L  D  + ++L+D YSK  +
Sbjct: 507 -LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGN 565

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +   +L+F   AP  D V+WN+M+ G            +F+ M     + + +T LA+L 
Sbjct: 566 MQDFQLIFEK-APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLR 624

Query: 377 SCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           +C     +E G    H      G        + ++ +    G +  A  L++ +   +D 
Sbjct: 625 ACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADA 684

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACG 482
             W  ++  C  +G+ + A K   S+ Q +   S   V L N+ +  G
Sbjct: 685 VIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAG 732



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 4/346 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + ++L  Y        +  +F E  ++D V+WNA+I A  +N      L  F  M++ G
Sbjct: 350 VANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 409

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  T   ++ A      L  G  +H   IK+ M  DS +    ++MY+KCG +  +E
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAE 469

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
                +     VSWN I+SG       E+    F +M   G   DN + ++ +   A L 
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  GK IHA  IK   +   Y+S T  L+ MYS+CG+++  +  F     +D V+WNA+
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISST--LVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAM 587

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RSVHGYAIRR 307
           + G+A +G  EEA  +   MQL  +V+P+ AT + ++  C    L+ +G    H      
Sbjct: 588 VCGYAQHGLGEEALKIFEYMQL-ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNY 646

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            L   L   + ++D   +S  +SKA  L   +    D V W +++S
Sbjct: 647 GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/513 (21%), Positives = 201/513 (39%), Gaps = 95/513 (18%)

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           Y  +     T   I   C+  ++L  GK  H   +   F       N L+ MYI C DL 
Sbjct: 35  YQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLG 94

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ--------------QQN 466
            AF +   +    DT  WN ++      G    A K F +M                +  
Sbjct: 95  FAFKVFDGMPQR-DTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMG 153

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGL------------------------------ 496
              D  T   V+ +C +LE    G  +HGL                              
Sbjct: 154 TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDL 213

Query: 497 -----------------------ALKSLMGLDTRVQNALITMYGRCRDIKSAST-VFESC 532
                                  ALK+  G D  +  A + MY +C ++   S  +F S 
Sbjct: 214 RGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSL 273

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
            N NL ++N +I  ++++   + AL +FR L+      +E+S+     AC  +     G 
Sbjct: 274 PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGL 333

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           Q+HG       Q N  +++A+LDMY  C               +   +W+++I+A+  +G
Sbjct: 334 QVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG 393

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              + + LF  M  SG+ P + +  S+L AC+    ++ G++ +N +++   +  ++   
Sbjct: 394 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR-MGLDSFVG 452

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-- 752
           + ++DM  + G +++A +    L  Q     W A++S  S    ++  ++    + ++  
Sbjct: 453 IALIDMYSKCGMMEKAEKLHDRLAEQTVVS-WNAIISGFSLQKQSEEAQKTFSKMLEMGV 511

Query: 753 EPENVGYYISLSN----MYVALGRWKDAVEIGK 781
           +P+N  Y   L      + V LG+   A  I K
Sbjct: 512 DPDNFTYATILDTCANLVTVELGKQIHAQIIKK 544


>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 887

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 205/723 (28%), Positives = 351/723 (48%), Gaps = 51/723 (7%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K G +A +   N     YA+ G L+S+   F  M   + VSW  ++S    N  P     
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI-----HALGIKLGYEDSPYVSVTN 215
           +F  M  SG   +  SL++ + A   +   S  K++     H + ++ G + +P+V   +
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVG--S 132

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           SL+ MY++ G I AA+RAF  +  KD+  WNA+++G+  NG    A   +  M     + 
Sbjct: 133 SLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMH-HSGLA 191

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T ++ +  C+ S     GR +H   I  +L  +  +MNSL+D Y ++     A  +
Sbjct: 192 PDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 251

Query: 336 FNAIAPMNDLVSWNSMISG---------LFKEML------YLCSQFSFSTLLAILPSCNS 380
           F  I    D VSWN+M SG         +F  ++      +  ++ +FS LL +     +
Sbjct: 252 FRKIR-QKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRL---SGA 307

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            E+   G  I     + G+++N +  NA+++M   CG L  A+     ++   +   WN 
Sbjct: 308 KENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFR-NIVTWNE 366

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I       H ++A++ F+S+       PD  T   V+SA      A + + +H + LK 
Sbjct: 367 IIAGYGLFSHSEDAMRLFRSLVCI-GERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQ 425

Query: 501 LMGLDTRVQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQ---NKAEVRA 556
                  V  +LI         ++S+  + E      L +W  +ISAF +   N   +  
Sbjct: 426 GFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFL 485

Query: 557 LELFR-HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
             LFR     +P+E  + ++L+AC    ++RH + IH  V   G   +  ++SA++D Y+
Sbjct: 486 FNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYA 545

Query: 616 NC---------------KSNAA--WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
            C                +N A  +++M++AY  HG   EA+ L+ EM  + + PT ++ 
Sbjct: 546 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 605

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +++LSACSH GLV++G   ++ ML  Y + P   ++ C+VD+L R G L EA   I  +P
Sbjct: 606 VAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMP 665

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            QP P VW ++++ C  HG+ ++G   AE + ++ P + G Y+SLSN+Y   G W+ A E
Sbjct: 666 FQPWPAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEE 725

Query: 779 IGK 781
             +
Sbjct: 726 TRR 728



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 234/500 (46%), Gaps = 28/500 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SLL  Y+      ++   F    NKD+  WNAM+   V N      +     M   G+ 
Sbjct: 132 SSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLA 191

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T +  V A +       GR +HCL I + + +++S+ N  V+MY +     ++   
Sbjct: 192 PDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 251

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   DTVSWNT+ SG  H+   +    Y  +M  +G + + V+ S  +  S      
Sbjct: 252 FRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 311

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S G  I AL  + GY D+  V V N++I+M  +CG ++ A   F  +T +++V+WN II 
Sbjct: 312 SLGLQIFALAYRHGYTDN--VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIA 369

Query: 251 GFALNGKFEEAFDLLHEMQLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           G+ L    E+A      M+L RS+      PD  T   ++S   ++   R+   +H   +
Sbjct: 370 GYGLFSHSEDA------MRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIIL 423

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEML 360
           ++       +  SL+   + +    ++ L     +   +LVSW ++IS     GL  E++
Sbjct: 424 KQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVI 483

Query: 361 YLCSQFSFST--------LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           +L + F   +        L  +L +C +   +   + IH   LK G SN+    +A++  
Sbjct: 484 FLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDA 543

Query: 413 YINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG++ +A S    +S   +D   +N ++ A   +G   EA+  ++ MT+ +  +P  
Sbjct: 544 YAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAK-LNPTP 602

Query: 472 VTLVNVISACGNLELAFEGK 491
            T V ++SAC +L L  +GK
Sbjct: 603 ATFVAILSACSHLGLVEQGK 622



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 71/153 (46%), Gaps = 5/153 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           H   +++++ AY+      S+ + F    +   D + +N M+TA   +  +   L+ + E
Sbjct: 533 HFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEE 592

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCG 122
           M +  +     T + I+SA + +  ++QG++     + A GM    +     V++ A+ G
Sbjct: 593 MTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKG 652

Query: 123 DLNSSECTFSGMHCAD-TVSWNTIMSGC-LHNN 153
            L+ ++     M        W ++++GC +H N
Sbjct: 653 LLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGN 685


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 298/589 (50%), Gaps = 37/589 (6%)

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G +  A + F  +   D  ++NA+I  ++  G F  A DL   M   R V P+  T   +
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR-VAPNKYTFPFV 106

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  C+  + LR GR++H +A    L  DL +  +L+D Y +      A  +F A  PM D
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF-AKMPMRD 165

Query: 345 LVSWNSMISGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPESLEFGKSIH 391
           +V+WN+M++G     +Y  +             + + STL+++LP      +L  G SIH
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 392 CWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            + L+     N   V    AL+ MY  C  LV A  +   +   +D + W+ +I      
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-WSALIGGFVLC 284

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               EA   FK M  +      + ++ + +  C +L     G  LH L  KS +  D   
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
            N+L++MY +   I  A+  F+     +  ++  ++S   QN     A  +F+ ++    
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           EP+  ++VS++ AC+ L  L+HGK  HG V   G    + I ++L+DMY+ C        
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  +   +W++MI+ YG HG G EA  LF  M N G  P   + I L++ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V EG  +++ M  +Y + P  EH++C+VD+L R G L EAY+FI+++P++    VWGA+L
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AC  H +  +GKQV+ ++ KL PE  G ++ LSN++ A GR+ +A E+
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 244/517 (47%), Gaps = 43/517 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ST+L+  Y   + F  +  +F +   +DVV WNAM+     +      +   
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---LCNVFVNM 117
            +M +  G+R +++TL+ ++  L Q   L QG  +H   ++A +  +     +    ++M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVS 176
           YAKC  L  +   F GM   + V+W+ ++ G +  +   +    F++M   G       S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           ++SA+   A L +L  G  +HAL  K G      ++ +NSL+SMY++ G I  A   F  
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHAD--LTASNSLLSMYAKAGLINEATMFFDE 367

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +S+ A++ G   NGK EEAF +  +MQ   ++EPDIAT+V+LI  C+    L+ 
Sbjct: 368 IAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC-NMEPDIATMVSLIPACSHLAALQH 426

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+  HG  I R L  +  + NSL+D Y+K   +  +  +F+ + P  D+VSWN+MI+   
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM-PARDVVSWNTMIAGYG 485

Query: 354 --GLFKEMLYL---CSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
             GL KE   L        F+    T + ++ +C+    +  GK    W        +  
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH---W---FDTMTHKY 539

Query: 405 GVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G+   M  YI   DL+A       A+  +Q +   +D   W  ++ AC       + I  
Sbjct: 540 GILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC----RIHKNIDL 595

Query: 458 FKSMTQ-QQNASPDS----VTLVNVISACGNLELAFE 489
            K +++  Q   P+     V L N+ SA G  + A E
Sbjct: 596 GKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAE 632



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 224/477 (46%), Gaps = 17/477 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F      D   +NA+I A          +  +  M+   +  +  T   ++ A + +  
Sbjct: 56  VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ GR +H  +  AG+  D  +    +++Y +C     +   F+ M   D V+WN +++G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVS-LSSAVAASACLGELSYGKVIHALGIKLGYE- 206
             ++      + +  +M   G    N S L S +   A  G L  G  IHA  ++   E 
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
           +   V +  +L+ MY++C  +  A R F GM  ++ V+W+A+I GF L  +  EAF+L  
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +M +         +V + + +CA    L  G  +H    +  +  DL   NSL+  Y+K+
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA 355

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +++A + F+ IA + D +S+ +++SG            +FK+M     +   +T++++
Sbjct: 356 GLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +P+C+   +L+ GK  H   +  G +  T   N+L+ MY  CG +  +  +  ++    D
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMP-ARD 473

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
              WN +I     +G  +EA   F  M + Q  +PD VT + +I+AC +  L  EGK
Sbjct: 474 VVSWNTMIAGYGIHGLGKEATTLFLGM-KNQGFAPDDVTFICLIAACSHSGLVTEGK 529



 Score = 43.9 bits (102), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 28/233 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG         SL+  Y+     + S  +F +   +DVV+WN MI           G+H 
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG--------YGIHG 488

Query: 61  FGE--------MVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLC 111
            G+        M  +G   D  T + +++A +    + +G+     ++ K G++      
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNYP--EKCLLYFREMGW 167
              V++ A+ G L+ +      M   AD   W  ++  C +H N    ++     +++G 
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP---YVSVTNSL 217
            G   + V LS+  +A+    E +  ++I  +    G++ SP   ++ +  SL
Sbjct: 609 EG-TGNFVLLSNIFSAAGRFDEAAEVRIIQKVK---GFKKSPGYSWIEINGSL 657


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 174/571 (30%), Positives = 277/571 (48%), Gaps = 101/571 (17%)

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML-- 360
           L   ++   NSL+  ++KS  L+ A  +F A  P  D VSW  M+ GL     F E +  
Sbjct: 93  LARRNVFTWNSLLSMFAKSGRLADARGVF-AEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 361 --------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                   +  +QF   TL  +L SC   ++   G+ +H + +KLG  +     N++++M
Sbjct: 152 LLDMTADGFTPTQF---TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208

Query: 413 YINCGDLVAAFSLLQRISHNSDTS------------------------------CWNIVI 442
           Y  CGD   A ++ +R+   S +S                               WN +I
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               QNG   +A+K F  M  + + +PD  T+ +V+SAC NL     GK +H   L++ M
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328

Query: 503 GLDTRVQNALITMYGRCR---------------------------------DIKSASTVF 529
             +++V NALI+ Y +                                   D++SA  +F
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
               N ++  W  MI  + QN     A++LFR +     EPN  ++ ++LS C  L  L 
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAY 630
           +GKQIH        +++S +S+A++ MY+                  K    W+SMI A 
Sbjct: 449 YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 508

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG+G EA+ LF EM  +G+ P + + + +LSACSH+G V+EG +YY+ +  E+ + PE
Sbjct: 509 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 568

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
             H+ C+VD+L R+G   EA EFI+ +P++P    WG++LSAC  H + ++ +  AE L 
Sbjct: 569 MSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++P N G Y +++N+Y A GRW DA  I K
Sbjct: 629 SIDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 237/567 (41%), Gaps = 108/567 (19%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVE 66
           T  SLL+ ++       +  +F E   +D V+W  M+     NR    G  +    +M  
Sbjct: 100 TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL--NRAGRFGEAIKTLLDMTA 157

Query: 67  EGIRFDSTTLLIIVS--ALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD- 123
           +G      TL  ++S  A+TQ   +  GR VH   +K G+ +   + N  +NMY KCGD 
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215

Query: 124 ------------------------------LNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
                                         ++ +E  F  M     VSWN +++G   N 
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 154 YPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA--LGIKLGYEDSPY 210
              K L L+ R +  S    D  +++S ++A A LG +  GK +HA  L  ++ Y     
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS--- 332

Query: 211 VSVTNSLISMYSQC---------------------------------GDIEAAERAFWGM 237
             VTN+LIS Y++                                  GD+E+A   F  M
Sbjct: 333 -QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+W A+I G+  NG+ +EA DL   M +    EP+  T+  ++S+CA    L  G
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYG 450

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI----- 352
           + +H  AIR LL     + N+++  Y++S S   A  +F+ +    + ++W SMI     
Sbjct: 451 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510

Query: 353 -------SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GLF+EML    +    T + +L +C+    +  GK  +  Q+K     N   
Sbjct: 511 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD-QIK-----NEHQ 564

Query: 406 VNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIK 456
           +   M  Y    DL+A       A   ++R+    D   W  ++ AC   +N    E + 
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAE-LA 623

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGN 483
             K ++   N S     + NV SACG 
Sbjct: 624 AEKLLSIDPNNSGAYSAIANVYSACGR 650



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 17/327 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y  +   ES+  +F    N+DVV W AMI    +N      +  F  M+  G  
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S TL  ++S    + CL  G+ +HC +I++ +   SS+ N  + MYA+ G    +   
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 488

Query: 131 FSGMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  + C   +T++W +++     +   E+ +  F EM  +G + D ++    ++A +  G
Sbjct: 489 FDQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNA 247
            ++ GK  +   IK  ++ +P +S    ++ + ++ G    A+     M  + D ++W +
Sbjct: 548 FVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPD-------IATVVTLISLCADSLLLREGRSV 300
           ++    ++ K  E  +L  E  L  S++P+       IA V +     +D+  + + R  
Sbjct: 607 LLSACRVH-KNAELAELAAEKLL--SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 663

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSN 327
              A+R+  G+    + S +  +   +
Sbjct: 664 K--AVRKETGFSWTHIRSKIHVFGADD 688


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/598 (29%), Positives = 302/598 (50%), Gaps = 34/598 (5%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-RS 273
           NS +      G++ AA + F  M   D+VSW +II  +      +EA  L   M+++  +
Sbjct: 44  NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V PD + +  ++  C  S  +  G S+H YA++  L   + + +SL+D Y +   + K+ 
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163

Query: 334 LLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSP 381
            +F+ + P  + V+W ++I+GL     +KE L   S+ S S       T    L +C   
Sbjct: 164 RVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
             +++GK+IH   +  GF       N+L  MY  CG++     L + +S   D   W  +
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSL 281

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           IVA  + G   +A++TF  M   Q   P+  T  ++ SAC +L     G+ LH   L   
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQ-VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
           +     V N+++ MY  C ++ SAS +F+     ++ +W+ +I  + Q        + F 
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
             R    +P + ++ S+LS    + V+  G+Q+H      G ++NS + S+L++MYS C 
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460

Query: 619 SN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S                 + ++MI+ Y  HGK  EAI+LF +    G RP   + IS+L+
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           AC+HSG +D G  Y+N M E Y++RP  EH+ C+VD+L R+G+L +A + I  +  +   
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VW  +L AC   GD + G++ AE + +L+P      ++L+N+Y + G  ++A  + K
Sbjct: 581 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 166/632 (26%), Positives = 289/632 (45%), Gaps = 55/632 (8%)

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSS 179
           G+L ++   F  M   D VSW +I+   +  N  ++ L+ F  M         D   LS 
Sbjct: 54  GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A      ++YG+ +HA  +K     S YV   +SL+ MY + G I+ + R F  M  
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVG--SSLLDMYKRVGKIDKSCRVFSEMPF 171

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGR 298
           ++ V+W AII G    G+++E      EM   RS E  D  T    +  CA    ++ G+
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMS--RSEELSDTYTFAIALKACAGLRQVKYGK 229

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
           ++H + I R     L + NSL   Y++   +     LF  ++   D+VSW S+I      
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVSWTSLIVAYKRI 288

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                    F +M       +  T  ++  +C S   L +G+ +HC  L LG +++    
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N++M MY  CG+LV+A  L Q +    D   W+ +I    Q G  +E  K F  M +Q  
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSG 406

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             P    L +++S  GN+ +   G+ +H LAL   +  ++ V+++LI MY +C  IK AS
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLG 583
            +F      ++ +   MI+ ++++     A++LF     + F P+ ++ +S+L+ACT  G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
            L  G     H F++           + + Y+   +   +  M+      G+  +A ++ 
Sbjct: 527 QLDLG----FHYFNM-----------MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571

Query: 644 HEMCNSGIRPTKSSVI--SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDM 700
           +EM        K  V+  +LL AC   G ++ G +    +LE   + P      V + ++
Sbjct: 572 NEMS-----WKKDDVVWTTLLIACKAKGDIERGRRAAERILE---LDPTCATALVTLANI 623

Query: 701 LGRSGKLQEAYEFIKNLPIQ---PKPGVWGAM 729
              +G L+EA    KN+  +    +PG W ++
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPG-WSSI 654



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 229/499 (45%), Gaps = 18/499 (3%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
            L+ +   +SLL  Y  V   + S  +F E   ++ VTW A+IT  V       GL +F 
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM       D+ T  I + A   +  +K G+ +H   I  G +    + N    MY +CG
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           ++    C F  M   D VSW +++          K +  F +M  S    +  + +S  +
Sbjct: 259 EMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L  L +G+ +H   + LG  DS  +SV+NS++ MYS CG++ +A   F GM C+D+
Sbjct: 319 ACASLSRLVWGEQLHCNVLSLGLNDS--LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SW+ II G+   G  EE F     M+   +   D A + +L+S+  +  ++  GR VH 
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA-LASLLSVSGNMAVIEGGRQVHA 435

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
            A+   L  +  + +SL++ YSK  S+ +A ++F      +D+VS  +MI+G        
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE-TDRDDIVSLTAMINGYAEHGKSK 494

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
               LF++ L +  +    T +++L +C     L+ G    +  Q              +
Sbjct: 495 EAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCM 554

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +    G L  A  ++  +S   D   W  +++AC   G  +   +  + + +      
Sbjct: 555 VDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCA 614

Query: 470 DS-VTLVNVISACGNLELA 487
            + VTL N+ S+ GNLE A
Sbjct: 615 TALVTLANIYSSTGNLEEA 633



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 244/497 (49%), Gaps = 29/497 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEEGI 69
           S L +  N     ++  +F +  + D+V+W ++I   V        L  F  M  V+  +
Sbjct: 45  SHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D++ L +++ A  Q + +  G  +H  ++K  +++   + +  ++MY + G ++ S  
Sbjct: 105 SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR 164

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            FS M   + V+W  I++G +H    ++ L YF EM  S E +D  + + A+ A A L +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           + YGK IH   I  G+  +  + V NSL +MY++CG+++     F  M+ +DVVSW ++I
Sbjct: 225 VKYGKAIHTHVIVRGFVTT--LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +   G+  +A +   +M+    V P+  T  ++ S CA    L  G  +H   +   L
Sbjct: 283 VAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEML 360
              L + NS+M  YS   +L  A +LF  +    D++SW+++I G          FK   
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFS 400

Query: 361 YL------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           ++       + F+ ++LL++     +   +E G+ +H   L  G   N+   ++L++MY 
Sbjct: 401 WMRQSGTKPTDFALASLLSV---SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG +  A S++   +   D      +I    ++G  +EAI  F+  + +    PDSVT 
Sbjct: 458 KCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTF 515

Query: 475 VNVISAC---GNLELAF 488
           ++V++AC   G L+L F
Sbjct: 516 ISVLTACTHSGQLDLGF 532



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 177/356 (49%), Gaps = 10/356 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF+  L  + SL T Y+     +  L LF     +DVV+W ++I A       V  +  
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M    +  +  T   + SA   ++ L  G  +HC  +  G+    S+ N  + MY+ 
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST 357

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L S+   F GM C D +SW+TI+ G     + E+   YF  M  SG +  + +L+S 
Sbjct: 358 CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASL 417

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++ S  +  +  G+ +HAL +  G E +   +V +SLI+MYS+CG I+ A   F      
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNS--TVRSSLINMYSKCGSIKEASMIFGETDRD 475

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VS  A+I+G+A +GK +EA DL  E  L     PD  T +++++ C  S  L  G   
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISVLTACTHSGQLDLG--F 532

Query: 301 HGYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           H + + +   Y++         ++D   ++  LS AE + N ++   D V W +++
Sbjct: 533 HYFNMMQET-YNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 193/663 (29%), Positives = 325/663 (49%), Gaps = 49/663 (7%)

Query: 141 SWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           S N  M   L  N   + L L+ +++ W G   +   ++ A+   AC G+   G  IHA 
Sbjct: 45  SLNRSMLTALRRNLSLEALDLFKKQLQW-GFVGNIDQVTVAIVLKACCGDSKLGCQIHAF 103

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            I  G+    +V+V NSL++MY + G  + A   F  +   D+VSWN ++ GF    + +
Sbjct: 104 AISSGF--ISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQ---RSD 158

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           +A +    M     V  D  T  T+++ C+D      G  +H   ++  L  ++ + N+L
Sbjct: 159 DALNFALRMNFT-GVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNAL 217

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--FKEMLYLCSQFSFSTLLAILPS 377
           +  YS+   L +A                NS +  +  F EML    +    +    + +
Sbjct: 218 ITMYSRCCRLVEAR-------------RGNSGLEAILVFLEMLKEGMKLDHVSFTGAISA 264

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C   +  E G+ IH   +K+G+  +    N L+  Y  C D+  A  + + I  + +   
Sbjct: 265 CGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESII-DRNVVS 323

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W  +I    ++     A   F  M ++    P+ VT V +I A     L  EG+ +HG+ 
Sbjct: 324 WTTMISISEED-----ATSLFNEM-RRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVC 377

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K+    +  V N+LITMY +   +  +  VFE      + +WN +IS ++QN     AL
Sbjct: 378 VKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEAL 437

Query: 558 ELFRH--LEFEPNEISIVSILS--ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           + F    +E  PNE +  S+LS  A  +   +RHG++ H H+  LG   N  +SSALLDM
Sbjct: 438 QTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDM 497

Query: 614 YSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+                 K+  AW+++ISA+  HG     + LF +M   G++P   + 
Sbjct: 498 YAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITF 557

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +++++AC   G+VD G Q +N+M++++ + P  EH+  +VDMLGR+G+L+EA EF+  +P
Sbjct: 558 LAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIP 617

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
                 V  ++L AC  HG+  M K+VA+ L ++EP   G Y+ +SN+Y   G W+   +
Sbjct: 618 GGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAK 677

Query: 779 IGK 781
           I K
Sbjct: 678 IRK 680



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 261/539 (48%), Gaps = 52/539 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++H+    SL+  Y     F+ +L +F    N D+V+WN +++    +      L+F 
Sbjct: 108 GFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDD---ALNFA 164

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+ FD+ T   +++  +       G  +H   +K G+  +  + N  + MY++C
Sbjct: 165 LRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRC 224

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +    SG+                      + +L F EM   G + D+VS + A+
Sbjct: 225 CRLVEARRGNSGL----------------------EAILVFLEMLKEGMKLDHVSFTGAI 262

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A     E   G+ IH+L +K+GY+   +V V N LIS YS+C DIE A+  F  +  ++
Sbjct: 263 SACGHGKEFELGRQIHSLAVKIGYD--THVKVCNVLISTYSKCEDIEDAKLVFESIIDRN 320

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  +I     +   E+A  L +EM+    V P+  T V LI       L+ EG+ +H
Sbjct: 321 VVSWTTMI-----SISEEDATSLFNEMR-RDGVYPNDVTFVGLIHAITMKNLVEEGQMIH 374

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           G  ++     +L + NSL+  Y+K  S+S +  +F  +    +++SWNS+IS     GL+
Sbjct: 375 GVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELN-YREIISWNSLISGYAQNGLW 433

Query: 357 KEML--YLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
           +E L  +L +       +F+F ++L+ + S  +  S+  G+  H   LKLG + N I  +
Sbjct: 434 QEALQTFLSALMESRPNEFTFGSVLSSIASAEAI-SMRHGQRCHSHILKLGLNTNPIVSS 492

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY   G +  +  +       ++ + W  +I A  ++G ++  +  FK M +++  
Sbjct: 493 ALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARHGDYEAVMNLFKDM-EREGV 550

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSA 525
            PDS+T + VI+ACG   +   G  L    +K  L+       ++++ M GR   +K A
Sbjct: 551 KPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEA 609



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 302/661 (45%), Gaps = 77/661 (11%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
            +M+TA   N   +  L  F + ++ G     D  T+ I++ A    +  K G  +H  +
Sbjct: 48  RSMLTALRRN-LSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDS--KLGCQIHAFA 104

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           I +G I+  ++ N  +NMY K G  + +   F  ++  D VSWNT++SG       +  L
Sbjct: 105 ISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGF---QRSDDAL 161

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            +   M ++G   D V+ ++ +A  +      +G  +H+  +K G +   +V   N+LI+
Sbjct: 162 NFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVG--NALIT 219

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MYS+C  +  A R   G+                      EA  +  EM L   ++ D  
Sbjct: 220 MYSRCCRLVEARRGNSGL----------------------EAILVFLEM-LKEGMKLDHV 256

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFN 337
           +    IS C        GR +H  A++  +GYD  + + N L+  YSK   +  A+L+F 
Sbjct: 257 SFTGAISACGHGKEFELGRQIHSLAVK--IGYDTHVKVCNVLISTYSKCEDIEDAKLVFE 314

Query: 338 AIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           +I   N +VSW +MIS        LF EM       +  T + ++ +      +E G+ I
Sbjct: 315 SIIDRN-VVSWTTMISISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMI 373

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   +K  F +     N+L+ MY     +  +  + + +++    S WN +I    QNG 
Sbjct: 374 HGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIIS-WNSLISGYAQNGL 432

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL--AFEGKSLHGLALKSLMGLDTR- 507
           +QEA++TF S   +  + P+  T  +V+S+  + E      G+  H   LK  +GL+T  
Sbjct: 433 WQEALQTFLSALME--SRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILK--LGLNTNP 488

Query: 508 -VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            V +AL+ MY +   I  +  VF      N   W  +ISA +++      + LF+ +E E
Sbjct: 489 IVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMERE 548

Query: 567 ---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
              P+ I+ +++++AC + G++  G Q+           NS +   L++      S   +
Sbjct: 549 GVKPDSITFLAVITACGRKGMVDTGYQLF----------NSMVKDHLIE-----PSPEHY 593

Query: 624 SSMISAYGYHGKGWEAIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           SSM+   G  G+  EA E   ++   +G+    S + SLL AC   G VD   +  ++++
Sbjct: 594 SSMVDMLGRAGRLKEAEEFVGQIPGGAGL----SVLQSLLGACRIHGNVDMAKRVADDLI 649

Query: 683 E 683
           E
Sbjct: 650 E 650



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 220/467 (47%), Gaps = 32/467 (6%)

Query: 37  DVVTWNAMIT------ACVENRCVVMGLH---FFGEMVEEGIRFDSTTLLIIVSALTQMN 87
           +V   NA+IT        VE R    GL     F EM++EG++ D  +    +SA     
Sbjct: 210 EVFVGNALITMYSRCCRLVEARRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGK 269

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
             + GR +H L++K G      +CNV ++ Y+KC D+  ++  F  +   + VSW T++S
Sbjct: 270 EFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS 329

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
                   E     F EM   G   ++V+    + A      +  G++IH + +K  +  
Sbjct: 330 IS-----EEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLS 384

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD-LLH 266
              ++V+NSLI+MY++   +  + + F  +  ++++SWN++I G+A NG ++EA    L 
Sbjct: 385 E--LNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLS 442

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
            +   R  E    +V++ I+  A+++ +R G+  H + ++  L  + ++ ++L+D Y+K 
Sbjct: 443 ALMESRPNEFTFGSVLSSIA-SAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKR 501

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
            S+ ++  +F+   P+ + V+W ++IS             LFK+M     +    T LA+
Sbjct: 502 GSICESLGVFSE-TPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAV 560

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           + +C     ++ G  +    +K      +    ++++ M    G L  A   + +I   +
Sbjct: 561 ITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGA 620

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
             S    ++ AC  +G+   A +    + + +     S  L++ + A
Sbjct: 621 GLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYA 667



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 170/346 (49%), Gaps = 22/346 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  H+     L++ YS     E +  +F    +++VV+W  MI+   E+         F
Sbjct: 285 GYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLF 339

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  +G+  +  T + ++ A+T  N +++G+++H + +K   +++ ++ N  + MYAK 
Sbjct: 340 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 399

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE--MGWSGEQADNVSLSS 179
             ++ S   F  ++  + +SWN+++SG   N   ++ L  F    M     +    S+ S
Sbjct: 400 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLS 459

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A++  +  + +G+  H+  +KLG   +P VS  ++L+ MY++ G I  +   F     
Sbjct: 460 SIASAEAIS-MRHGQRCHSHILKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPL 516

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+ V+W AII   A +G +E   +L  +M+    V+PD  T + +I+ C      R+G  
Sbjct: 517 KNEVAWTAIISAHARHGDYEAVMNLFKDME-REGVKPDSITFLAVITACG-----RKGMV 570

Query: 300 VHGYAIRRLLGYDLLM------MNSLMDFYSKSNSLSKAELLFNAI 339
             GY +   +  D L+       +S++D   ++  L +AE     I
Sbjct: 571 DTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI 616


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 200/675 (29%), Positives = 330/675 (48%), Gaps = 69/675 (10%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           Q D+ +L  A+ ++A L +    + +HA  ++      P  +V N+L++ Y++CGD++AA
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 231 ERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
              F       +D VS+N++I    L  ++E A D L +M  +     D+++   +  L 
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDM--LAEGRHDVSSFTLVSVLL 177

Query: 289 ADSLL-----LREGRSVHGYAIRRLL---GYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           A S L      R GR  H +A++R     G +    N+L+  Y++   +  A+ LF   A
Sbjct: 178 ACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTA 237

Query: 341 PM-----NDLVSWNSMISGLFK------------EMLYLCSQFSFSTLLAILPSCNSPES 383
                   D+V+WN+MIS L +            +M+ L  +    T  + LP+C+  E 
Sbjct: 238 AAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEM 297

Query: 384 LEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIV 441
           L  G+ +H   LK    + N+   +AL+ MY     + +A  +   +   S     WN +
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAM 357

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLALKS 500
           I    Q G  +EA++ F  M  +   +P   T+  V+ AC   E  F GK ++HG  +K 
Sbjct: 358 ICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSE-GFAGKEAMHGYVVKR 416

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
            M  +  VQNAL+ MY R  ++  A  +F      ++ +WN +I+          A +L 
Sbjct: 417 GMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLV 476

Query: 561 RHLEFE-------------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
             ++                     PN I+++++L  C  L     GK+IHG+      +
Sbjct: 477 TEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALE 536

Query: 602 ENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEM 646
            +  + SAL+DMY+ C   AA               W+ +I AYG HG G EA+ LF EM
Sbjct: 537 SDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEM 596

Query: 647 CNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
              G   P + + I+ L+ACSHSGLVD GL+ ++ M  ++ V+P  + H C+VD+LGR+G
Sbjct: 597 AAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAG 656

Query: 706 KLQEAYEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           +L EAY  I ++ P + +   W ++L AC  H + ++G+  AE LF+LEP    +Y+ L 
Sbjct: 657 RLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLC 716

Query: 765 NMYVALGRWKDAVEI 779
           N+Y A G W  +V +
Sbjct: 717 NIYSAAGMWDKSVAV 731



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 156/609 (25%), Positives = 279/609 (45%), Gaps = 75/609 (12%)

Query: 95  VHCLSIKAGMIADSS--LCNVFVNMYAKCG--DLNSSECTFSGMHCADTVSWNTIMSG-C 149
           +H  +++  ++   S  + N  +  YA+CG  D   +    +     D VS+N+++S  C
Sbjct: 85  LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVS----LSSAVAASACLGE--LSYGKVIHALGIKL 203
           L   + E+ L   R+M   G    +VS    +S  +A S   G+     G+  HA  +K 
Sbjct: 145 LFRQW-ERALDALRDMLAEGRH--DVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKR 201

Query: 204 GYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGMTCK------DVVSWNAIIDGFALNG 256
           G+ D        N+L+SMY++ G ++ A+  F            DVV+WN +I      G
Sbjct: 202 GFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGG 261

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLM 315
           +  EA ++L++M  +  V PD  T  + +  C+   +L  GR +H   ++   L  +  +
Sbjct: 262 RCAEAVEVLYDMVSL-GVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFV 320

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMI-----SGLFKEMLYLCSQF--- 366
            ++L+D Y+ +  ++ A  +F+ +  P   L  WN+MI     +G+ +E L L S+    
Sbjct: 321 ASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAE 380

Query: 367 -----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                S +T+  +LP+C   E     +++H + +K G + N    NALM MY   G++  
Sbjct: 381 AGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDV 440

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM------------TQQQNAS- 468
           A  +   I    D   WN +I  C   GH  EA +    M            T++  A  
Sbjct: 441 ARRIFAMIDPR-DVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHR 499

Query: 469 --PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             P+++TL+ ++  C  L     GK +HG A++  +  D  V +AL+ MY +C  + ++ 
Sbjct: 500 CMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASR 559

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQL 582
            VF+     N+ TWN +I A+  +     A+ LF  +    E  PNE++ ++ L+AC+  
Sbjct: 560 AVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHS 619

Query: 583 GVLRHGKQI-HGHVFHLGFQENSFISSALLD-----------------MYSNCKSNAAWS 624
           G++  G ++ HG     G +    + + ++D                 M    +  +AWS
Sbjct: 620 GLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWS 679

Query: 625 SMISAYGYH 633
           S++ A   H
Sbjct: 680 SLLGACRLH 688



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 160/629 (25%), Positives = 284/629 (45%), Gaps = 67/629 (10%)

Query: 1   RGFLAHLPTST---SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVV 55
           R  L H P+     +LLTAY+     +++LALF  T    +D V++N++I+A    R   
Sbjct: 91  RRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWE 150

Query: 56  MGLHFFGEMVEEGIR----FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS-- 109
             L    +M+ EG      F   ++L+  S L   +  + GR  H  ++K G + +    
Sbjct: 151 RALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRER 210

Query: 110 -LCNVFVNMYAKCGDLNSSECTFSGMHCA------DTVSWNTIMSGCLHNNYPEKCLLYF 162
              N  ++MYA+ G ++ ++  F     A      D V+WNT++S  +      + +   
Sbjct: 211 FPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVL 270

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLIS 219
            +M   G + D V+ +SA+ A + L  L+ G+ +HA+ +K    D+   +   V ++L+ 
Sbjct: 271 YDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK----DADLAANSFVASALVD 326

Query: 220 MYSQCGDIEAAERAF--WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           MY+    + +A R F       + +  WNA+I G+A  G  EEA +L   M+      P 
Sbjct: 327 MYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPS 386

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
             T+  ++  CA S       ++HGY ++R +  +  + N+LMD Y++   +  A  +F 
Sbjct: 387 ETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFA 446

Query: 338 AIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS----------------------- 369
            I P  D+VSWN++I+G        E   L ++                           
Sbjct: 447 MIDP-RDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNI 505

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           TL+ +LP C +  +   GK IH + ++    ++    +AL+ MY  CG L A+ ++  R+
Sbjct: 506 TLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRL 565

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               +   WN++I+A   +G   EA+  F  M     A+P+ VT +  ++AC +  L   
Sbjct: 566 PRR-NVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624

Query: 490 GKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY--NCNLCTWNCMISA 546
           G  L HG+     +     +   ++ + GR   +  A ++  S       +  W+ ++ A
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684

Query: 547 FSQNK----AEVRALELFRHLEFEPNEIS 571
              ++     EV A  LF   E EP E S
Sbjct: 685 CRLHRNVELGEVAAERLF---ELEPGEAS 710



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 234/534 (43%), Gaps = 63/534 (11%)

Query: 1   RGFL----AHLPTSTSLLTAYSNVSYFESSLALFYETC------NKDVVTWNAMITACVE 50
           RGFL       P + +LL+ Y+ +   + + +LF  T         DVVTWN MI+  V+
Sbjct: 201 RGFLDEGRERFPFN-ALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQ 259

Query: 51  NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSS 109
                  +    +MV  G+R D  T    + A +++  L  GR +H + +K A + A+S 
Sbjct: 260 GGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSF 319

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVS--------WNTIMSGCLHNNYPEKCLLY 161
           + +  V+MYA    + S+   F      D V         WN ++ G       E+ L  
Sbjct: 320 VASALVDMYAGNEKVASARRVF------DMVPEPSRQLGMWNAMICGYAQAGMDEEALEL 373

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGK-VIHALGIKLGYEDSPYVSVTNSLISM 220
           F  M      A + +  S V  +    E   GK  +H   +K G   + +V   N+L+ M
Sbjct: 374 FSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQ--NALMDM 431

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE----- 275
           Y++ G+++ A R F  +  +DVVSWN +I G  + G   EAF L+ EMQL          
Sbjct: 432 YARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSST 491

Query: 276 ----------PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
                     P+  T++TL+  CA       G+ +HGYA+R  L  D+ + ++L+D Y+K
Sbjct: 492 TEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAK 551

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS--------TLL 372
              L+ +  +F+ + P  ++++WN +I      GL  E + L  + +          T +
Sbjct: 552 CGCLAASRAVFDRL-PRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFI 610

Query: 373 AILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           A L +C+    ++ G  + H  +   G          ++ +    G L  A+S++  +  
Sbjct: 611 AALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEP 670

Query: 432 N-SDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
                S W+ ++ AC   +N    E +   +    +   +   V L N+ SA G
Sbjct: 671 GEQQVSAWSSLLGACRLHRNVELGE-VAAERLFELEPGEASHYVLLCNIYSAAG 723


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 181/610 (29%), Positives = 290/610 (47%), Gaps = 126/610 (20%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GRSVH   I++ L   + +MN+LM FY+K+ SL  A  +F+ + P+    SWN++ISG  
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEM-PLKSTFSWNTLISGYA 87

Query: 357 KE--------MLYL---CSQFSFSTLLA-------------------------------- 373
           K+        +LY    C   S++ ++                                 
Sbjct: 88  KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS--- 430
           +L SC + ++L+ G+ IH + +KLG  +      +L++MY  CGD V A  +  R++   
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 431 ---------------------------HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                                       + D   WN +I   +Q G+  EA+  F  M  
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR--- 520
           + +  PD+ TL +++SAC NLE    GK +H   L++       V NALI+MY +     
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 521 ------------------------------DIKSASTVFESCYNCNLCTWNCMISAFSQN 550
                                         ++K A  +F    + ++  W  MI  + QN
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                ALELFR +     EPN  ++ ++LS  + L +L HGKQIH      G      ++
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 608 SALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           +AL+ MY+                  K   +W+SMI A   HG G EAI LF  M + G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P   + + +LSAC+H GLV++G +YYN M E +++ P   H+ C++D+ GR+G LQEAY
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
            FI+++PI+P    WG++L++C  H +  + K  AE L  ++P N G Y++L+N+Y A G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 772 RWKDAVEIGK 781
           +W++A +  K
Sbjct: 628 KWENAAQTRK 637



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 249/602 (41%), Gaps = 114/602 (18%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR VHC  IK G+     L N  +  YAK G L  +   F  M    T SWNT++SG   
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 152 NNYPE--KCLLY-----------------------------FREMGWSGEQADNVSLSSA 180
               E  + LLY                             F +M          ++S+ 
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 181 VAASACLGELSYGKVIHALGIKLGYED----------------SPYV------------- 211
           +++ A    L  G+ IH+  +KLG                    P +             
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S  N+LIS+Y Q G  E A   F  M  +D+VSWN++I G++  G   EA  +  +M   
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR------------------------- 306
            S++PD  T+ +++S CA+   L  G+ +H Y +R                         
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 307 --------RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
                   R    +++   SL+D Y+K  ++  A  +FN +    D+V+W +MI G    
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD-RDVVAWTAMIVGYVQN 387

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF+ M+    + +  TL A+L   +S   LE GK IH   +K G S+     
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ MY   G++  A  +    +   +   W  +I+A  Q+G  +EAI  F+ M     
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERML-SVG 506

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKSA 525
             PD +T V V+SAC ++ L  +G+  + +  +      T    A +I +YGR   ++ A
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE----ISIVSILSAC 579
               ES     +   W  ++++   +K A++  +   R L  +P      +++ ++ SAC
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626

Query: 580 TQ 581
            +
Sbjct: 627 GK 628



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 239/561 (42%), Gaps = 82/561 (14%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ Y+    FE S  L YE  + D V+W A+I    +       +  F +M+ E +  
Sbjct: 81  TLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPP 140

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T+  ++S+      L  GR +H   +K G+ +   +    +NMYAKCGD   ++  F
Sbjct: 141 SQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVF 200

Query: 132 SGMHCA-------------------------------DTVSWNTIMSGCLHNNYPEKCLL 160
             M                                  D VSWN+++SG     Y  + L 
Sbjct: 201 DRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALA 260

Query: 161 YFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            F +M      + DN +L+S ++A A L +L+ GK IHA  ++   E S   +V N+LIS
Sbjct: 261 IFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG--AVGNALIS 318

Query: 220 MYSQCGDIE---------------------------------AAERAFWGMTCKDVVSWN 246
           MY++ G +E                                  A   F  +  +DVV+W 
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G+  NG + +A +L   M +    EP+  T+  ++S+ +   +L  G+ +H  AI+
Sbjct: 379 AMIVGYVQNGLWNDALELFRLM-VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK 437

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                   + N+L+  Y+K+ +++ A+ +F+      ++VSW SMI              
Sbjct: 438 AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAIN 497

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMY 413
           LF+ ML +  +    T + +L +C     +E G+  +    ++     T+   A ++ +Y
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMTQQQNASPDSV 472
              G L  A+  ++ +    D   W  ++ +C  + +   A +   + +      S   +
Sbjct: 558 GRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYL 617

Query: 473 TLVNVISACGNLELAFEGKSL 493
            L NV SACG  E A + + L
Sbjct: 618 ALANVYSACGKWENAAQTRKL 638



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 187/393 (47%), Gaps = 47/393 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  + ++ T  +L++ Y     FE + + F +  ++D+V+WN+MI+   +    +  L  
Sbjct: 202 RMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAI 261

Query: 61  FGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+ E  ++ D+ TL  I+SA   +  L  G+ +H   ++A      ++ N  ++MYA
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321

Query: 120 KC---------------------------------GDLNSSECTFSGMHCADTVSWNTIM 146
           K                                  G++  +   F+ +   D V+W  ++
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            G + N      L  FR M   G + ++ +L++ ++ S+ L  L +GK IHA  IK G  
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            +P  SVTN+LI+MY++ G+I  A+R F      K++VSW ++I   A +G  +EA +L 
Sbjct: 442 STP--SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLF 499

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-----YAIRRLLGYDLLMMNSLM 320
             M L   ++PD  T V ++S C    L+ +GR  +      + I   L +   M    +
Sbjct: 500 ERM-LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACM----I 554

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           D Y ++  L +A L   ++    D ++W S+++
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 102/404 (25%)

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N+   S    +++     ++  F G+S+H   +K  + L   + N L+T Y +   ++ A
Sbjct: 5   NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64

Query: 526 STVFESCYNCNLCTWNCMISAFS-QNKAEV------------------------------ 554
             VF+     +  +WN +IS ++ Q   EV                              
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+ +F  +      P++ ++ ++LS+C     L  G++IH  V  LG      ++++LL
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 612 DMYSNC----------------------------------------------KSNAAWSS 625
           +MY+ C                                              +   +W+S
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244

Query: 626 MISAYGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           MIS Y   G   EA+ +F +M N   ++P   ++ S+LSAC++   ++ G Q     +  
Sbjct: 245 MISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ-----IHA 299

Query: 685 YDVRPETEHHVCI----VDMLGRSGKLQEAYEFIK-----NLPIQPKPGVWGAMLSACSH 735
           Y +R ETE    +    + M  +SG ++ A   ++     NL I      + ++L   + 
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII----AFTSLLDGYTK 355

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            G+ K  +   E+  KL   +V  + ++   YV  G W DA+E+
Sbjct: 356 LGNVKPAR---EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALEL 396


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 174/571 (30%), Positives = 276/571 (48%), Gaps = 101/571 (17%)

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML-- 360
           L   ++   NSL+  ++KS  L+ A  +F A  P  D VSW  M+ GL     F E +  
Sbjct: 93  LARRNVFTWNSLLSMFAKSGRLADARGVF-AEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 361 --------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                   +  +QF   TL  +L SC   ++   G+ +H + +KLG  +     N++++M
Sbjct: 152 LLDMTADGFTPTQF---TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208

Query: 413 YINCGDLVAAFSLLQRISHNSDTS------------------------------CWNIVI 442
           Y  CGD   A ++ +R+   S +S                               WN +I
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               QNG   +A+K F  M  + + +PD  T+ +V+SAC NL     GK +H   L++ M
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328

Query: 503 GLDTRVQNALITMYGRCR---------------------------------DIKSASTVF 529
             +++V NALI+ Y +                                   D++SA  +F
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
               N ++  W  MI  + QN     A++LFR +     EPN  ++ ++LS C  L  L 
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAY 630
           +GKQIH        + +S +S+A++ MY+                  K    W+SMI A 
Sbjct: 449 YGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 508

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG+G EA+ LF EM  +G+ P + + + +LSACSH+G V+EG +YY+ +  E+ + PE
Sbjct: 509 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 568

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
             H+ C+VD+L R+G   EA EFI+ +P++P    WG++LSAC  H + ++ +  AE L 
Sbjct: 569 MSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++P N G Y +++N+Y A GRW DA  I K
Sbjct: 629 SIDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 237/567 (41%), Gaps = 108/567 (19%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVE 66
           T  SLL+ ++       +  +F E   +D V+W  M+     NR    G  +    +M  
Sbjct: 100 TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGL--NRAGRFGEAIKTLLDMTA 157

Query: 67  EGIRFDSTTLLIIVS--ALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD- 123
           +G      TL  ++S  A+TQ   +  GR VH   +K G+ +   + N  +NMY KCGD 
Sbjct: 158 DGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215

Query: 124 ------------------------------LNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
                                         ++ +E  F  M     VSWN +++G   N 
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 154 YPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA--LGIKLGYEDSPY 210
              K L L+ R +  S    D  +++S ++A A LG +  GK +HA  L  ++ Y     
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS--- 332

Query: 211 VSVTNSLISMYSQC---------------------------------GDIEAAERAFWGM 237
             VTN+LIS Y++                                  GD+E+A   F  M
Sbjct: 333 -QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+W A+I G+  NG+ +EA DL   M +    EP+  T+  ++S+CA    L  G
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYG 450

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI----- 352
           + +H  AIR LL     + N+++  Y++S S   A  +F+ +    + ++W SMI     
Sbjct: 451 KQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510

Query: 353 -------SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   GLF+EML    +    T + +L +C+    +  GK  +  Q+K     N   
Sbjct: 511 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYD-QIK-----NEHQ 564

Query: 406 VNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIK 456
           +   M  Y    DL+A       A   ++R+    D   W  ++ AC   +N    E + 
Sbjct: 565 IAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAE-LA 623

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGN 483
             K ++   N S     + NV SACG 
Sbjct: 624 AEKLLSIDPNNSGAYSAIANVYSACGR 650



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 17/327 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y  +   ES+  +F    N+DVV W AMI    +N      +  F  M+  G  
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S TL  ++S    + CL  G+ +HC +I++ +   SS+ N  + MYA+ G    +   
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRM 488

Query: 131 FSGMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  + C   +T++W +++     +   E+ +  F EM  +G + D ++    ++A +  G
Sbjct: 489 FDQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNA 247
            ++ GK  +   IK  ++ +P +S    ++ + ++ G    A+     M  + D ++W +
Sbjct: 548 FVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 606

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPD-------IATVVTLISLCADSLLLREGRSV 300
           ++    ++ K  E  +L  E  L  S++P+       IA V +     +D+  + + R  
Sbjct: 607 LLSACRVH-KNAELAELAAEKLL--SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 663

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSN 327
              A+R+  G+    + S +  +   +
Sbjct: 664 K--AVRKETGFSWTHIRSKIHVFGADD 688


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 275/513 (53%), Gaps = 34/513 (6%)

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           + +H   +   L +   ++  L+   S    ++ A  +F+ + P   +  WN++I G   
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL-PRPQIFPWNAIIRGYSR 96

Query: 356 ---FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
              F++ L + S    +       T   +L +C+    L+ G+ +H    +LGF  +   
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            N L+ +Y  C  L +A ++ + +     T   W  ++ A  QNG   EA++ F  M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHM-RK 215

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            +  PD V LV+V++A   L+   +G+S+H   +K  + ++  +  +L TMY +C  + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  +F+   + NL  WN MIS +++N     A+++F  +   +  P+ ISI S +SAC Q
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           +G L   + ++ +V    ++++ FISSAL+DM++ C               +    WS+M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I  YG HG+  EAI L+  M   G+ P   + + LL AC+HSG+V EG  ++N ++ ++ 
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFN-LMADHK 454

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P+ +H+ C++D+LGR+G L +AYE IK +P+QP   VWGA+LSAC  H   ++G+  A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + LF ++P N G+Y+ LSN+Y A   W    E+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 214/461 (46%), Gaps = 28/461 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T L+ A S+      +  +F +     +  WNA+I     N      L  +  M    + 
Sbjct: 57  TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS T   ++ A + ++ L+ GR VH    + G  AD  + N  + +YAKC  L S+   
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176

Query: 131 FSGMHCADT--VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F G+   +   VSW  I+S    N  P + L  F  M     + D V+L S + A  CL 
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQ 236

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+ IHA  +K+G E  P + +  SL +MY++CG +  A+  F  M   +++ WNA+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A NG   EA D+ HEM + + V PD  ++ + IS CA    L + RS++ Y  R  
Sbjct: 295 ISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              D+ + ++L+D ++K  S+  A L+F+      D+V W++MI G            L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLY 412

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-----LMH 411
           + M       +  T L +L +CN    +  G     W   L  +++ I         ++ 
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREG----WWFFNL-MADHKINPQQQHYACVID 467

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           +    G L  A+ +++ +      + W  ++ AC ++ H +
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 239/512 (46%), Gaps = 29/512 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI  DS    +I SA T    LKQ   +H   +  G+     L    ++  +  GD+  +
Sbjct: 17  GIHSDSFYASLIDSA-THKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +       WN I+ G   NN+ +  LL +  M  +    D+ +    + A + L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSW 245
             L  G+ +HA   +LG++    V V N LI++Y++C  + +A   F G+    + +VSW
Sbjct: 133 SHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            AI+  +A NG+  EA ++   M+ M  V+PD   +V++++       L++GRS+H   +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSHMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +  L  +  ++ SL   Y+K   ++ A++LF+ +   N L+ WN+MISG           
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN-LILWNAMISGYAKNGYAREAI 308

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            +F EM+    +    ++ + + +C    SLE  +S++ +  +  + ++    +AL+ M+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG +  A  +  R + + D   W+ +IV    +G  +EAI  +++M ++    P+ VT
Sbjct: 369 AKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVT 426

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC- 532
            + ++ AC +  +  EG     L     +    +    +I + GR   +  A  V +   
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486

Query: 533 YNCNLCTWNCMISAFSQNK----AEVRALELF 560
               +  W  ++SA  +++     E  A +LF
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 178/378 (47%), Gaps = 5/378 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A +     L+  Y+      S+  +F       + +V+W A+++A  +N   +  L 
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M +  ++ D   L+ +++A T +  LKQGR +H   +K G+  +  L      MYA
Sbjct: 209 IFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG + +++  F  M   + + WN ++SG   N Y  + +  F EM     + D +S++S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           A++A A +G L   + ++    +  Y D  ++S  ++LI M+++CG +E A   F     
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGARLVFDRTLD 386

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DVV W+A+I G+ L+G+  EA  L   M+    V P+  T + L+  C  S ++REG  
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
                    +         ++D   ++  L +A  +   +     +  W +++S   K  
Sbjct: 446 FFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505

Query: 360 LYLCSQFSFSTLLAILPS 377
                +++   L +I PS
Sbjct: 506 HVELGEYAAQQLFSIDPS 523


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 191/568 (33%), Positives = 292/568 (51%), Gaps = 82/568 (14%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF--YSKSNSLSKAELLFNAI 339
           +TL+S C     L++   +H   I+  L      ++ L++F   S   +LS A LLF +I
Sbjct: 36  LTLLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              N  + WN+MI G             +  ML    + +  T   +L SC    + + G
Sbjct: 93  EQPNQFI-WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDL------VAAFSLLQRISHNS-------- 433
           K IH   LKLG  ++     +L++MY   G+L       +  SL   +S  +        
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211

Query: 434 ----------------DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
                           D   WN +I    Q+G F+EA+  F+ M ++ N +P+  T+V V
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANVAPNESTMVTV 270

Query: 478 ISAC---GNLELAFEGKSL---HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +SAC   G+LEL    +S    HGL      G + R+ NALI MY +C D+  A  +FE 
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGL------GSNLRLVNALIDMYSKCGDLDKARDLFEG 324

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
               ++ +WN MI  +S   +   AL LFR ++    EPN+++ VSIL AC  LG L  G
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 589 KQIHGHVFH--LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           K IH ++    LG    S  +S L+DMY+ C               KS  +W++MIS   
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTS-LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLA 443

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG    A+ELF +M + G  P   + + +LSACSH+GLV+ G Q +++M+E+YD+ P+ 
Sbjct: 444 MHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKL 503

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C++D+LGR+G   EA   +KN+ ++P   +WG++L AC  HG+ ++G+  A+ LF+
Sbjct: 504 QHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFE 563

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           LEPEN G Y+ LSN+Y   GRW D   I
Sbjct: 564 LEPENPGAYVLLSNIYATAGRWDDVARI 591



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 179/352 (50%), Gaps = 21/352 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+T Y+     + +  LF E   +D V+WNAMI    ++      L FF EM    + 
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            + +T++ ++SA  Q   L+ G  V       G+ ++  L N  ++MY+KCGDL+ +   
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+   D +SWN ++ G  H N  ++ L  FR+M  S  + ++V+  S + A A LG L
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTN-----SLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             GK IHA      Y D  ++ +TN     SLI MY++CG+IEAA++ F GM  K + SW
Sbjct: 382 DLGKWIHA------YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----V 300
           NA+I G A++G    A +L  +M+     EPD  T V ++S C+ + L+  GR      V
Sbjct: 436 NAMISGLAMHGHANMALELFRQMR-DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             Y I   L +       ++D   ++    +AE L   +    D   W S++
Sbjct: 495 EDYDISPKLQH----YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 235/522 (45%), Gaps = 65/522 (12%)

Query: 14  LTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDS 73
           ++ + N+SY   +L LF      +   WN MI     +   V  + F+  M+  G+  +S
Sbjct: 76  ISPFGNLSY---ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNS 132

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            T   ++ +  ++   ++G+ +H   +K G+ +D  +    +NMYA+ G+L  +E  FS 
Sbjct: 133 YTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSK 192

Query: 134 -------------------------------MHCADTVSWNTIMSGCLHNNYPEKCLLYF 162
                                          +   D VSWN +++G   +   E+ L +F
Sbjct: 193 SSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFF 252

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVI------HALGIKLGYEDSPYVSVTNS 216
           +EM  +    +  ++ + ++A A  G L  G  +      H LG  L         + N+
Sbjct: 253 QEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL--------RLVNA 304

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           LI MYS+CGD++ A   F G+  KD++SWN +I G++    ++EA  L  +MQ   +VEP
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ-QSNVEP 363

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELL 335
           +  T V+++  CA    L  G+ +H Y  ++ LG  +  +  SL+D Y+K  ++  A+ +
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  + P   L SWN+MISG            LF++M     +    T + +L +C+    
Sbjct: 424 FAGMKP-KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482

Query: 384 LEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +E G+      ++    S        ++ +    G    A +L++ +    D + W  ++
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGN 483
            AC  +G+ +      K + + +  +P + V L N+ +  G 
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGR 584



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 3/260 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  ++L    +L+  YS     + +  LF   C KD+++WN MI            L  F
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
            +M +  +  +  T + I+ A   +  L  G+ +H    K  + + ++SL    ++MYAK
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ +++  F+GM      SWN ++SG   + +    L  FR+M   G + D+++    
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G +  G+   +  ++  Y+ SP +     +I +  + G  + AE     M  K
Sbjct: 474 LSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532

Query: 241 -DVVSWNAIIDGFALNGKFE 259
            D   W +++    ++G  E
Sbjct: 533 PDGAIWGSLLGACRVHGNVE 552


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 183/617 (29%), Positives = 300/617 (48%), Gaps = 81/617 (13%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WN +I      G  E+   L   MQ +    PD  T   ++  C +    R G SVH
Sbjct: 91  VFWWNQLIRRSVHLGFLEDVLQLYRRMQRL-GWRPDHYTFPFVLKACGEIPSFRCGASVH 149

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP--MNDLVSWNSMISG----- 354
                    +++ + N L+  Y +  +   A  +F+ +    + DLVSWNS+++      
Sbjct: 150 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 209

Query: 355 -------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                  +F+ M   L  +    +L+ +LP+C S  +   GK +H + L+ G   +    
Sbjct: 210 DSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG 269

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ- 465
           NA++ MY  CG +  A  + +R+    D   WN ++   +Q G F +A+  F+ + +++ 
Sbjct: 270 NAVVDMYAKCGMMEEANKVFERMK-VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKI 328

Query: 466 ---------------------------------NASPDSVTLVNVISACGNLELAFEGKS 492
                                             + P+ VTLV+++S C        GK 
Sbjct: 329 ELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKE 388

Query: 493 LHGLALKSLMGLDTR-------VQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCM 543
            H  A+K ++ LD         V NALI MY +C+  K+A  +F+     + ++ TW  +
Sbjct: 389 THCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVL 448

Query: 544 ISAFSQNKAEVRALELFRHLE-----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
           I   +Q+     ALELF  +        PN  +I   L AC +LG LR G+QIH +V   
Sbjct: 449 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 508

Query: 599 GFQENS-FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            F+    F+++ L+DMYS                 ++  +W+S+++ YG HG+G EA+++
Sbjct: 509 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 568

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F+EM   G+ P   + + +L ACSHSG+VD+G+ Y+N M +++ V P  EH+ C+VD+L 
Sbjct: 569 FYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 628

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L EA E I+ +P++P P VW A+LSAC  + + ++G+  A  L +LE  N G Y  
Sbjct: 629 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTL 688

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN+Y     WKD   I
Sbjct: 689 LSNIYANARCWKDVARI 705



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 170/641 (26%), Positives = 281/641 (43%), Gaps = 103/641 (16%)

Query: 4   LAHLPTST-SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L H PT   S+   +++ +   S L   + + +  V  WN +I   V    +   L  + 
Sbjct: 57  LPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHT-VFWWNQLIRRSVHLGFLEDVLQLYR 115

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   G R D  T   ++ A  ++   + G  VH +   +G   +  + N  V+MY +CG
Sbjct: 116 RMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 175

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLS 178
              ++   F  M      D VSWN+I++  +      + +  F  M    G + D VSL 
Sbjct: 176 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 235

Query: 179 SAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           + + A A +G  S GK +H   ++ G +ED   V V N+++ MY++CG +E A + F  M
Sbjct: 236 NVLPACASVGAWSRGKQVHGYALRSGLFED---VFVGNAVVDMYAKCGMMEEANKVFERM 292

Query: 238 TCKDVVSWNAIIDGFALNGKFE-----------------------------------EAF 262
             KDVVSWNA++ G++  G+F+                                   EA 
Sbjct: 293 KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEAL 352

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-------GYDLLM 315
           D+  +M+L  S EP++ T+V+L+S CA +  L  G+  H +AI+ +L       G DL++
Sbjct: 353 DVFRQMRLCGS-EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 411

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------------LFKEMLYL 362
           +N+L+D YSK  S   A  +F+ I P +  +V+W  +I G            LF +ML  
Sbjct: 412 INALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQ- 470

Query: 363 CSQFSFSTLLAI---LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGD 418
              F       I   L +C    +L FG+ IH + L+  F +  + V N L+ MY   GD
Sbjct: 471 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGD 530

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + AA  +   + H  +   W  ++     +G  +EA++ F  M Q+    PD VT V V+
Sbjct: 531 VDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEM-QKVGLVPDGVTFVVVL 588

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC +  +  +G +                 N +   +G     +               
Sbjct: 589 YACSHSGMVDQGINYF---------------NGMNKDFGVVPGAEH-------------- 619

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
            + CM+   S+      A+EL R +  +P     V++LSAC
Sbjct: 620 -YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 659



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 239/540 (44%), Gaps = 62/540 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVENRCVVMGL 58
           GF  ++     L++ Y     +E++  +F E   +   D+V+WN+++ A ++    +  +
Sbjct: 156 GFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAM 215

Query: 59  HFFGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             F  M E+ GIR D+ +L+ ++ A   +    +G+ VH  ++++G+  D  + N  V+M
Sbjct: 216 KMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDM 275

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSG----------------------------- 148
           YAKCG +  +   F  M   D VSWN +++G                             
Sbjct: 276 YAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTW 335

Query: 149 -CLHNNYPEKCLLY-----FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
             +   Y ++ L +     FR+M   G + + V+L S ++  A  G L +GK  H   IK
Sbjct: 336 SAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIK 395

Query: 203 LGY---EDSP--YVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALN 255
                 E+ P   + V N+LI MYS+C   +AA   F  +  KD  VV+W  +I G A +
Sbjct: 396 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 455

Query: 256 GKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDL 313
           G+  EA +L  +M Q    V P+  T+   +  CA    LR GR +H Y +R R     L
Sbjct: 456 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 515

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + N L+D YSKS  +  A ++F+ +   N  VSW S+++G            +F EM  
Sbjct: 516 FVANCLIDMYSKSGDVDAARVVFDNMHQRNG-VSWTSLMTGYGMHGRGEEALQIFYEMQK 574

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           +       T + +L +C+    ++ G    +      G          ++ +    G L 
Sbjct: 575 VGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLD 634

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  L++ +      + W  ++ AC    + +        + + ++ +  S TL++ I A
Sbjct: 635 EAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYA 694



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/473 (24%), Positives = 205/473 (43%), Gaps = 83/473 (17%)

Query: 357 KEMLYLCSQFSFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           K  L   + F FST  +       +   C S  S E    IH   L  G  ++   +   
Sbjct: 11  KPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAEL---IHQQLLVQGLPHDPTHI--- 64

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           + MY+       A S+L+R+  +S T   WN +I      G  ++ ++ ++ M Q+    
Sbjct: 65  ISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRM-QRLGWR 123

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD  T   V+ ACG +     G S+H +   S    +  V N L++MYGRC   ++A  V
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183

Query: 529 FESCYN---CNLCTWNCMISAFSQNKAEVRALELFRH----LEFEPNEISIVSILSACTQ 581
           F+        +L +WN +++A+ Q    +RA+++F      L   P+ +S+V++L AC  
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----KSN----------------- 620
           +G    GKQ+HG+    G  E+ F+ +A++DMY+ C    ++N                 
Sbjct: 244 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 303

Query: 621 -----------------------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                                          WS++I+ Y   G G+EA+++F +M   G 
Sbjct: 304 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGS 363

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNM------LEEYDVRPETEHHVCIVDMLGRSG 705
            P   +++SLLS C+ +G +  G + + +       L+E D   +      ++DM  +  
Sbjct: 364 EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 423

Query: 706 KLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFK-LEPEN 756
             + A      +P + +  V W  ++   + HG+     +  EL  + L+P+N
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEA---NEALELFSQMLQPDN 473


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 292/603 (48%), Gaps = 100/603 (16%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  +NA I  F   G  E A +L+   Q     E +  T  +++ LCA    L +G+ VH
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELVCMCQ---KSELETKTYGSVLQLCAGLKSLTDGKKVH 122

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN------------------ 343
                  +G D  +   L+ FY+    L +   +F+ +   N                  
Sbjct: 123 SIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFK 182

Query: 344 --------------------------------DLVSWNSMISG------------LFKEM 359
                                           D++SWNSMISG            ++K+M
Sbjct: 183 ESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +YL      +T++++L  C +  +L  GK++H   +K  F       N L+ MY  CGDL
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  + +++   +  S W  +I   T++G    AI   + M +++    D V + +++ 
Sbjct: 303 DGALRVFEKMGERNVVS-WTSMIAGYTRDGWSDGAIILLQQM-EKEGVKLDVVAITSILH 360

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC        GK +H     + M  +  V NAL+ MY +C  ++ A++VF +    ++ +
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIIS 420

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           WN M+                   E +P+  ++  IL AC  L  L  GK+IHG++   G
Sbjct: 421 WNTMVG------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNG 462

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           +  +  +++AL+D+Y  C               K   +W+ MI+ YG HG G EAI  F+
Sbjct: 463 YSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFN 522

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           EM ++GI P + S IS+L ACSHSGL+++G +++  M  ++++ P+ EH+ C+VD+L R+
Sbjct: 523 EMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L +AY+FI+ LPI P   +WGA+L  C  + D ++ ++VAE +F+LEPEN GYY+ L+
Sbjct: 583 GNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLA 642

Query: 765 NMY 767
           N+Y
Sbjct: 643 NIY 645



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 148/600 (24%), Positives = 260/600 (43%), Gaps = 97/600 (16%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD------- 138
           +  L  G+ VH +     +  D +L    V+ YA CGDL      F  M   +       
Sbjct: 112 LKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFM 171

Query: 139 --------------------------------------------TVSWNTIMSGCLHNNY 154
                                                        +SWN+++SG + N  
Sbjct: 172 VSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGL 231

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  +++M + G   D  ++ S +   A  G LS GK +H+L IK  +E    ++ +
Sbjct: 232 TERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR--INFS 289

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L+ MYS+CGD++ A R F  M  ++VVSW ++I G+  +G  + A  LL +M+    V
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME-KEGV 348

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           + D+  + +++  CA S  L  G+ VH Y     +  +L + N+LMD Y+K  S+  A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 408

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +F+ +  + D++SWN+M+  L         +    T+  ILP+C S  +LE GK IH + 
Sbjct: 409 VFSTMV-VKDIISWNTMVGEL---------KPDSRTMACILPACASLSALERGKEIHGYI 458

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           L+ G+S++    NAL+ +Y+ CG L  A  L   I  + D   W ++I     +G+  EA
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGYGNEA 517

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           I TF  M +     PD V+ ++++ AC +  L  +G     + +K+   ++ ++++    
Sbjct: 518 IATFNEM-RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEH---- 571

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                                    + CM+   S+     +A +    L   P+     +
Sbjct: 572 -------------------------YACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +L  C     +   +++   VF L   EN+     L ++Y+  +       M    G  G
Sbjct: 607 LLCGCRIYHDIELAEKVAERVFELE-PENTGYYVLLANIYAEAEKREEVKRMREKIGKKG 665



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 204/441 (46%), Gaps = 50/441 (11%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           ES+  LF + C++DV++WN+MI+  V N     GL  + +M+  GI  D  T++ ++   
Sbjct: 202 ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
                L  G+ VH L+IK+      +  N  ++MY+KCGDL+ +   F  M   + VSW 
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++++G   + + +  ++  ++M   G + D V+++S + A A  G L  GK +H   IK 
Sbjct: 322 SMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKA 380

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
               S  + V N+L+ MY++CG +E A   F  M  KD++SWN ++              
Sbjct: 381 NNMASN-LFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------- 426

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                     ++PD  T+  ++  CA    L  G+ +HGY +R     D  + N+L+D Y
Sbjct: 427 ---------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 477

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
            K   L  A LLF+ I P  DLVSW  MI+G             F EM     +    + 
Sbjct: 478 VKCGVLGLARLLFDMI-PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 536

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFS 424
           ++IL +C+    LE G     W+       N   +   +  Y          G+L  A+ 
Sbjct: 537 ISILYACSHSGLLEQG-----WRF-FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 590

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            ++ +    D + W  ++  C
Sbjct: 591 FIETLPIAPDATIWGALLCGC 611



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 152/628 (24%), Positives = 264/628 (42%), Gaps = 126/628 (20%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNSLISMYSQCGDI 227
           + +  +  S +   A L  L+ GK +H++ IK   +G +++    +   L+S Y+ CGD+
Sbjct: 96  ELETKTYGSVLQLCAGLKSLTDGKKVHSI-IKSNSVGVDEA----LGLKLVSFYATCGDL 150

Query: 228 EAAERAFWGMTCK----------------------------------------------- 240
           +   R F  M  K                                               
Sbjct: 151 KEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDK 210

Query: 241 ----DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
               DV+SWN++I G+  NG  E    +  +M  +  ++ D+AT+++++  CA+S  L  
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYL-GIDVDLATIISVLVGCANSGTLSL 269

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G++VH  AI+      +   N+L+D YSK   L  A  +F  +   N +VSW SMI+G  
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN-VVSWTSMIAGYT 328

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     L ++M     +     + +IL +C    SL+ GK +H +      ++N  
Sbjct: 329 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 388

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NALM MY  CG +  A S+   +    D   WN ++      G  +            
Sbjct: 389 VCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMV------GELK------------ 429

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
               PDS T+  ++ AC +L     GK +HG  L++    D  V NAL+ +Y +C  +  
Sbjct: 430 ----PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQ 581
           A  +F+   + +L +W  MI+ +  +     A+  F   R    EP+E+S +SIL AC+ 
Sbjct: 486 ARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH 545

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE 641
            G+L  G +     F++   +N F     L+ Y      A    ++S  G   K ++ IE
Sbjct: 546 SGLLEQGWRF----FYI--MKNDFNIEPKLEHY------ACMVDLLSRTGNLSKAYKFIE 593

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPE-TEHHVCIVD 699
                    I P  +   +LL  C     +   ++    + E  +++ PE T ++V + +
Sbjct: 594 TLP------IAPDATIWGALLCGCR----IYHDIELAEKVAERVFELEPENTGYYVLLAN 643

Query: 700 MLGRSGKLQEA---YEFIKNLPIQPKPG 724
           +   + K +E     E I    ++  PG
Sbjct: 644 IYAEAEKREEVKRMREKIGKKGLRKNPG 671



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 165/355 (46%), Gaps = 29/355 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +  S +LL  YS     + +L +F +   ++VV+W +MI     +      +    
Sbjct: 282 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 341

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M +EG++ D   +  I+ A  +   L  G+ VH       M ++  +CN  ++MYAKCG
Sbjct: 342 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCG 401

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            +  +   FS M   D +SWNT++                      GE + D+ +++  +
Sbjct: 402 SMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRTMACIL 439

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A L  L  GK IH   ++ GY    +V+  N+L+ +Y +CG +  A   F  +  KD
Sbjct: 440 PACASLSALERGKEIHGYILRNGYSSDRHVA--NALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW  +I G+ ++G   EA    +EM+    +EPD  + ++++  C+ S LL +G    
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDA-GIEPDEVSFISILYACSHSGLLEQGWRFF 556

Query: 302 GYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y ++     +  L     ++D  S++ +LSKA      +    D   W +++ G
Sbjct: 557 -YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 610


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 298/589 (50%), Gaps = 37/589 (6%)

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G +  A + F  +   D  ++NA+I  ++  G F  A DL   M   R V P+  T   +
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFR-VAPNKYTFPFV 106

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  C+  + LR GR++H +A    L  DL +  +L+D Y +      A  +F A  PM D
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF-AKMPMRD 165

Query: 345 LVSWNSMISGLFKEMLYLCS-------------QFSFSTLLAILPSCNSPESLEFGKSIH 391
           +V+WN+M++G     +Y  +             + + STL+++LP      +L  G SIH
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 392 CWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            + L+     N   V    AL+ MY  C  LV A  +   +   +D + W+ +I      
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT-WSALIGGFVLC 284

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               EA   FK M  +      + ++ + +  C +L     G  LH L  KS +  D   
Sbjct: 285 DRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTA 344

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---F 565
            N+L++MY +   I  A+  F+     +  ++  ++S   QN     A  +F+ ++    
Sbjct: 345 SNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
           EP+  ++VS++ AC+ L  L+HGK  HG V   G    + I ++L+DMY+ C        
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  +   +W++MI+ YG HG G EA  LF  M N G  P   + I L++ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V EG  +++ M  +Y + P  EH++C+VD+L R G L EAY+FI+++P++    VWGA+L
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AC  H +  +GKQV+ ++ KL PE  G ++ LSN++ A GR+ +A E+
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 633



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 244/517 (47%), Gaps = 43/517 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  ST+L+  Y   + F  +  +F +   +DVV WNAM+     +      +   
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---LCNVFVNM 117
            +M +  G+R +++TL+ ++  L Q   L QG  +H   ++A +  +     +    ++M
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVS 176
           YAKC  L  +   F GM   + V+W+ ++ G +  +   +    F++M   G       S
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           ++SA+   A L +L  G  +HAL  K G      ++ +NSL+SMY++ G I  A   F  
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHAD--LTASNSLLSMYAKAGLINEATMFFDE 367

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD +S+ A++ G   NGK EEAF +  +MQ   ++EPDIAT+V+LI  C+    L+ 
Sbjct: 368 IAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQAC-NMEPDIATMVSLIPACSHLAALQH 426

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+  HG  I R L  +  + NSL+D Y+K   +  +  +F+ + P  D+VSWN+MI+   
Sbjct: 427 GKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKM-PARDVVSWNTMIAGYG 485

Query: 354 --GLFKEMLYL---CSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
             GL KE   L        F+    T + ++ +C+    +  GK    W        +  
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKH---W---FDTMTHKY 539

Query: 405 GVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G+   M  YI   DL+A       A+  +Q +   +D   W  ++ AC       + I  
Sbjct: 540 GILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC----RIHKNIDL 595

Query: 458 FKSMTQ-QQNASPDS----VTLVNVISACGNLELAFE 489
            K +++  Q   P+     V L N+ SA G  + A E
Sbjct: 596 GKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAE 632



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 224/477 (46%), Gaps = 17/477 (3%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F      D   +NA+I A          +  +  M+   +  +  T   ++ A + +  
Sbjct: 56  VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ GR +H  +  AG+  D  +    +++Y +C     +   F+ M   D V+WN +++G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVS-LSSAVAASACLGELSYGKVIHALGIKLGYE- 206
             ++      + +  +M   G    N S L S +   A  G L  G  IHA  ++   E 
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
           +   V +  +L+ MY++C  +  A R F GM  ++ V+W+A+I GF L  +  EAF+L  
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFK 295

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +M +         +V + + +CA    L  G  +H    +  +  DL   NSL+  Y+K+
Sbjct: 296 DMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA 355

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +++A + F+ IA + D +S+ +++SG            +FK+M     +   +T++++
Sbjct: 356 GLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +P+C+   +L+ GK  H   +  G +  T   N+L+ MY  CG +  +  +  ++    D
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR-D 473

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
              WN +I     +G  +EA   F  M + Q  +PD VT + +I+AC +  L  EGK
Sbjct: 474 VVSWNTMIAGYGIHGLGKEATTLFLGM-KNQGFAPDDVTFICLIAACSHSGLVTEGK 529



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 28/233 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG         SL+  Y+     + S  +F +   +DVV+WN MI           G+H 
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAG--------YGIHG 488

Query: 61  FGE--------MVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-VHCLSIKAGMIADSSLC 111
            G+        M  +G   D  T + +++A +    + +G+     ++ K G++      
Sbjct: 489 LGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 548

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNNYP--EKCLLYFREMGW 167
              V++ A+ G L+ +      M   AD   W  ++  C +H N    ++     +++G 
Sbjct: 549 ICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGP 608

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP---YVSVTNSL 217
            G   + V LS+  +A+    E +  ++I  +    G++ SP   ++ +  SL
Sbjct: 609 EG-TGNFVLLSNIFSAAGRFDEAAEVRIIQKVK---GFKKSPGYSWIEINGSL 657


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 191/568 (33%), Positives = 292/568 (51%), Gaps = 82/568 (14%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF--YSKSNSLSKAELLFNAI 339
           +TL+S C     L++   +H   I+  L      ++ L++F   S   +LS A LLF +I
Sbjct: 36  LTLLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              N  + WN+MI G             +  ML    + +  T   +L SC    + + G
Sbjct: 93  EQPNQFI-WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDL------VAAFSLLQRISHNS-------- 433
           K IH   LKLG  ++     +L++MY   G+L       +  SL   +S  +        
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211

Query: 434 ----------------DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
                           D   WN +I    Q+G F+EA+  F+ M ++ N +P+  T+V V
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM-KRANVAPNESTMVTV 270

Query: 478 ISAC---GNLELAFEGKSL---HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +SAC   G+LEL    +S    HGL      G + R+ NALI MY +C D+  A  +FE 
Sbjct: 271 LSACAQSGSLELGNWVRSWIEDHGL------GSNLRLVNALIDMYSKCGDLDKARDLFEG 324

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
               ++ +WN MI  +S   +   AL LFR ++    EPN+++ VSIL AC  LG L  G
Sbjct: 325 ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 589 KQIHGHVFH--LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
           K IH ++    LG    S  +S L+DMY+ C               KS  +W++MIS   
Sbjct: 385 KWIHAYIDKKFLGLTNTSLWTS-LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLA 443

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG    A+ELF +M + G  P   + + +LSACSH+GLV+ G Q +++M+E+YD+ P+ 
Sbjct: 444 MHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKL 503

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C++D+LGR+G   EA   +KN+ ++P   +WG++L AC  HG+ ++G+  A+ LF+
Sbjct: 504 QHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFE 563

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEI 779
           LEPEN G Y+ LSN+Y   GRW D   I
Sbjct: 564 LEPENPGAYVLLSNIYATAGRWDDVARI 591



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 179/352 (50%), Gaps = 21/352 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+T Y+     + +  LF E   +D V+WNAMI    ++      L FF EM    + 
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            + +T++ ++SA  Q   L+ G  V       G+ ++  L N  ++MY+KCGDL+ +   
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+   D +SWN ++ G  H N  ++ L  FR+M  S  + ++V+  S + A A LG L
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTN-----SLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             GK IHA      Y D  ++ +TN     SLI MY++CG+IEAA++ F GM  K + SW
Sbjct: 382 DLGKWIHA------YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSW 435

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----V 300
           NA+I G A++G    A +L  +M+     EPD  T V ++S C+ + L+  GR      V
Sbjct: 436 NAMISGLAMHGHANMALELFRQMR-DEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMV 494

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             Y I   L +       ++D   ++    +AE L   +    D   W S++
Sbjct: 495 EDYDISPKLQH----YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/518 (24%), Positives = 234/518 (45%), Gaps = 64/518 (12%)

Query: 14  LTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDS 73
           ++ + N+SY   +L LF      +   WN MI     +   V  + F+  M+  G+  +S
Sbjct: 76  ISPFGNLSY---ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNS 132

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
            T   ++ +  ++   ++G+ +H   +K G+ +D  +    +NMYA+ G+L  +E  FS 
Sbjct: 133 YTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSK 192

Query: 134 -------------------------------MHCADTVSWNTIMSGCLHNNYPEKCLLYF 162
                                          +   D VSWN +++G   +   E+ L +F
Sbjct: 193 SSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFF 252

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVI------HALGIKLGYEDSPYVSVTNS 216
           +EM  +    +  ++ + ++A A  G L  G  +      H LG  L         + N+
Sbjct: 253 QEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL--------RLVNA 304

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           LI MYS+CGD++ A   F G+  KD++SWN +I G++    ++EA  L  +MQ   +VEP
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ-QSNVEP 363

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELL 335
           +  T V+++  CA    L  G+ +H Y  ++ LG  +  +  SL+D Y+K  ++  A+ +
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F  + P   L SWN+MISG            LF++M     +    T + +L +C+    
Sbjct: 424 FAGMKP-KSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482

Query: 384 LEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +E G+      ++    S        ++ +    G    A +L++ +    D + W  ++
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            AC  +G+ +      K + + +  +P +  L++ I A
Sbjct: 543 GACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYA 580



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 3/260 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  ++L    +L+  YS     + +  LF   C KD+++WN MI            L  F
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
            +M +  +  +  T + I+ A   +  L  G+ +H    K  + + ++SL    ++MYAK
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ +++  F+GM      SWN ++SG   + +    L  FR+M   G + D+++    
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G +  G+   +  ++  Y+ SP +     +I +  + G  + AE     M  K
Sbjct: 474 LSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532

Query: 241 -DVVSWNAIIDGFALNGKFE 259
            D   W +++    ++G  E
Sbjct: 533 PDGAIWGSLLGACRVHGNVE 552


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 189/617 (30%), Positives = 308/617 (49%), Gaps = 46/617 (7%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIID 250
           G+ +HA  +K G   S YV  TN+ +++Y++   +  A   F  +    KD VSWN++I+
Sbjct: 30  GRTLHARILKTGSISSIYV--TNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLIN 87

Query: 251 GFALNGKFEE---AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
            F+ N        A  L   M    +V P+  T+  + S  ++   +  G+  H  A++ 
Sbjct: 88  AFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKT 147

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------- 354
               D+ + +SL++ Y K+  +  A  LF+ + P  + VSW +MISG             
Sbjct: 148 GCSGDVYVGSSLLNMYCKTGFVFDARKLFDRM-PERNTVSWATMISGYASSDIADKAVEV 206

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             L +    + ++F+ +++L+ L    S   +  G+ +H   +K G        NAL+ M
Sbjct: 207 FELMRREEEIQNEFALTSVLSAL---TSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTM 263

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A    +  S + ++  W+ ++    Q G   +A+K F  M       P   
Sbjct: 264 YAKCGSLDDAVRTFE-FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKM-HSSGVLPSEF 321

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV VI+AC +L    EGK +H  A K   GL   V +A++ MY +C  +  A   FE  
Sbjct: 322 TLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECV 381

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              ++  W  +I+ + QN      L L+  ++ E   PNE+++ S+L AC+ L  L  GK
Sbjct: 382 QQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGK 441

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           Q+H  +   GF+    I SAL  MY+ C               +   +W++MIS    +G
Sbjct: 442 QMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNG 501

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G +A+ELF +M   GI+P   + ++LLSACSH GLVD G +Y+  M +E+++ P  EH+
Sbjct: 502 HGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHY 561

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+L R+GKL EA EFI++  +     +W  +L AC +H + ++G    E L +L  
Sbjct: 562 ACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGS 621

Query: 755 ENVGYYISLSNMYVALG 771
                Y+ LS++Y ALG
Sbjct: 622 PESSAYVLLSSIYTALG 638



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 186/700 (26%), Positives = 325/700 (46%), Gaps = 67/700 (9%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM--HCADTVSWNT 144
           N LK GR +H   +K G I+   + N F+N+YAK   L+ +   F  +  +  D VSWN+
Sbjct: 26  NILK-GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNS 84

Query: 145 IMSGCLHNNYPEK---CLLYFREMGWSGEQADNV-SLSSAVAASACLGELSYGKVIHALG 200
           +++    N+        +  FR M  +     N  +L+   +A++ L ++  GK  H++ 
Sbjct: 85  LINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVA 144

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K G     YV   +SL++MY + G +  A + F  M  ++ VSW  +I G+A +   ++
Sbjct: 145 VKTGCSGDVYVG--SSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADK 202

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A ++   M+    ++ + A    L +L +D + +  GR VH  AI+  L   + + N+L+
Sbjct: 203 AVEVFELMRREEEIQNEFALTSVLSALTSD-VFVYTGRQVHSLAIKNGLLAIVSVANALV 261

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YLCSQ 365
             Y+K  SL  A   F      N  ++W++M++G            LF +M     L S+
Sbjct: 262 TMYAKCGSLDDAVRTFEFSGDKNS-ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           F   TL+ ++ +C+   ++  GK +H +  KLGF      ++A++ MY  CG L  A   
Sbjct: 321 F---TLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            + +    D   W  +I    QNG ++  +  +  M Q +   P+ +T+ +V+ AC +L 
Sbjct: 378 FECV-QQPDVVLWTSIITGYVQNGDYEGGLNLYGKM-QMERVIPNELTMASVLRACSSLA 435

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              +GK +H   +K    L+  + +AL  MY +C  +     +F    + ++ +WN MIS
Sbjct: 436 ALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMIS 495

Query: 546 AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
             SQN    +ALELF  +  E   P+ ++ V++LSAC+ +G++  G +     F + F E
Sbjct: 496 GLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWE----YFKMMFDE 551

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE---LFHEMCNSGIRPTKSSVI 659
             F  + +++ Y      A    ++S  G   +  E IE   + H +C   I        
Sbjct: 552 --FNIAPMVEHY------ACMVDILSRAGKLNEAKEFIESATVDHGLCLWRI-------- 595

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---CIVDMLGRSGKLQEAYEFIKN 716
            LL AC +    + G+ Y    L E    PE+  +V    I   LG    ++     +K 
Sbjct: 596 -LLGACKNHRNYELGV-YAGEKLVELG-SPESSAYVLLSSIYTALGDRENVERVRRIMKA 652

Query: 717 LPIQPKPGVWGAMLSACSH---HGDTKMGKQVAELLFKLE 753
             +  +PG     L    H    GD +   QV E+  +LE
Sbjct: 653 RGVNKEPGCSWIELKGLVHVFVVGDNQH-PQVDEIRLELE 691



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 277/566 (48%), Gaps = 28/566 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVV---M 56
           G ++ +  + + L  Y+  ++   +L LF      +KD V+WN++I A  +N        
Sbjct: 41  GSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSF 100

Query: 57  GLHFFGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
            +  F  M+    +  ++ TL  + SA + ++ +  G+  H +++K G   D  + +  +
Sbjct: 101 AISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLL 160

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           NMY K G +  +   F  M   +TVSW T++SG   ++  +K +  F  M    E  +  
Sbjct: 161 NMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEF 220

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L+S ++A      +  G+ +H+L IK G      VSV N+L++MY++CG ++ A R F 
Sbjct: 221 ALTSVLSALTSDVFVYTGRQVHSLAIKNGL--LAIVSVANALVTMYAKCGSLDDAVRTFE 278

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               K+ ++W+A++ G+A  G  ++A  L ++M     V P   T+V +I+ C+D   + 
Sbjct: 279 FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMH-SSGVLPSEFTLVGVINACSDLCAVV 337

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
           EG+ +H +A +   G  L ++++++D Y+K  SL+ A   F  +    D+V W S+I+G 
Sbjct: 338 EGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ-QPDVVLWTSIITGY 396

Query: 356 FKEMLY-----LCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            +   Y     L  +           T+ ++L +C+S  +L+ GK +H   +K GF    
Sbjct: 397 VQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEV 456

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              +AL  MY  CG L   + +  R+  + D   WN +I   +QNGH  +A++ F+ M  
Sbjct: 457 PIGSALSAMYTKCGSLDDGYLIFWRMP-SRDVISWNAMISGLSQNGHGNKALELFEKML- 514

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRD 521
            +   PD VT VN++SAC ++ L   G     +       +   V++   ++ +  R   
Sbjct: 515 LEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEF-NIAPMVEHYACMVDILSRAGK 573

Query: 522 IKSASTVFESC-YNCNLCTWNCMISA 546
           +  A    ES   +  LC W  ++ A
Sbjct: 574 LNEAKEFIESATVDHGLCLWRILLGA 599



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 251/534 (47%), Gaps = 41/534 (7%)

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M L +   P    ++  +  C  +  + +GR++H   ++      + + N+ ++ Y+K+N
Sbjct: 1   MSLPKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTN 60

Query: 328 SLSKAELLFNAIAPMN-DLVSWNSMISGLFKEMLYLCSQFSFS----------------T 370
            LS A  LF++I   + D VSWNS+I+   +      S F+ S                T
Sbjct: 61  HLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHT 120

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L  +  + ++   +  GK  H   +K G S +    ++L++MY   G +  A  L  R+ 
Sbjct: 121 LAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP 180

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              +T  W  +I     +    +A++ F+ M +++    +   L +V+SA  +    + G
Sbjct: 181 ER-NTVSWATMISGYASSDIADKAVEVFELMRREEEIQ-NEFALTSVLSALTSDVFVYTG 238

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           + +H LA+K+ +     V NAL+TMY +C  +  A   FE   + N  TW+ M++ ++Q 
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQG 298

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               +AL+LF  +      P+E ++V +++AC+ L  +  GKQ+H   F LGF    ++ 
Sbjct: 299 GDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVL 358

Query: 608 SALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           SA++DMY+ C S A                W+S+I+ Y  +G     + L+ +M    + 
Sbjct: 359 SAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI 418

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P + ++ S+L ACS    +D+G Q +  ++ +Y  + E      +  M  + G L + Y 
Sbjct: 419 PNELTMASVLRACSSLAALDQGKQMHARII-KYGFKLEVPIGSALSAMYTKCGSLDDGYL 477

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE--LLFKLEPENVGYYISLS 764
               +P +     W AM+S  S +G      ++ E  LL  ++P+ V +   LS
Sbjct: 478 IFWRMPSRDVIS-WNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLS 530



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 32/496 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SLL  Y    +   +  LF     ++ V+W  MI+    +      +  F  M  E   
Sbjct: 157 SSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEI 216

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +   L  ++SALT    +  GR VH L+IK G++A  S+ N  V MYAKCG L+ +  T
Sbjct: 217 QNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRT 276

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      ++++W+ +++G       +K L  F +M  SG      +L   + A + L  +
Sbjct: 277 FEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAV 336

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +H+   KLG+    Y  V ++++ MY++CG +  A + F  +   DVV W +II 
Sbjct: 337 VEGKQMHSFAFKLGFGLQLY--VLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIIT 394

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  NG +E   +L  +MQ+ R + P+  T+ +++  C+    L +G+ +H   I+    
Sbjct: 395 GYVQNGDYEGGLNLYGKMQMERVI-PNELTMASVLRACSSLAALDQGKQMHARIIKYGFK 453

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + ++L   Y+K  SL    L+F  + P  D++SWN+MISG            LF++
Sbjct: 454 LEVPIGSALSAMYTKCGSLDDGYLIFWRM-PSRDVISWNAMISGLSQNGHGNKALELFEK 512

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNA-----LMHM 412
           ML    +    T + +L +C+    ++ G     W+  K+ F    I         ++ +
Sbjct: 513 MLLEGIKPDPVTFVNLLSACSHMGLVDRG-----WEYFKMMFDEFNIAPMVEHYACMVDI 567

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS- 471
               G L  A   ++  + +     W I++ AC  + +++  +   + + +    SP+S 
Sbjct: 568 LSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVEL--GSPESS 625

Query: 472 --VTLVNVISACGNLE 485
             V L ++ +A G+ E
Sbjct: 626 AYVLLSSIYTALGDRE 641


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/550 (33%), Positives = 287/550 (52%), Gaps = 50/550 (9%)

Query: 275 EPDIATVVTL-ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +P +A + +L  S+   SL L   R  H   +   L  + L+   L+  Y+       + 
Sbjct: 21  DPSLALLQSLHFSVTHKSLKLT--RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSR 78

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKEMLY---------LCS------QFSFSTLLAILPSC 378
           L+F+++   N  + WNS+I+G  K  LY         +CS       F+ STL  +    
Sbjct: 79  LVFDSLQHKNVFL-WNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSEL 137

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +   L  GKSIH   +++GF ++T+  N++M MY  CG+   +  +   ++  +  S W
Sbjct: 138 GA---LFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGS-W 193

Query: 439 NIVIV--ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHG 495
           N++I   A + N +F+E    F    Q     PD+ T+ +++  C   +  ++ G+ LH 
Sbjct: 194 NVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHC 253

Query: 496 LALKS--LMGLDTRVQNA--LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
             +K+  ++GLD+ V     LI MY R   +     VF+     N+ +W  MI+ + +N 
Sbjct: 254 YIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENG 313

Query: 552 AEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               AL LFR ++     EPN +S+VS+L AC+    L  G+QIHG            + 
Sbjct: 314 DSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLC 373

Query: 608 SALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           +AL+DMYS C                K   +WSSMIS YG HGKG EAI L+ +M  +GI
Sbjct: 374 NALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGI 433

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           RP   + + +LSACS SGLV+EGL  Y++++ +Y + P  E   CIVDMLGR+G+L  A 
Sbjct: 434 RPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPAL 493

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           +FIK +P++P P VWGA++S    HGD +M +     L +LEPEN   Y+S+SN+Y +  
Sbjct: 494 DFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSR 553

Query: 772 RWKDAVEIGK 781
           RW    E+ +
Sbjct: 554 RWDAVAEVRR 563



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 229/481 (47%), Gaps = 23/481 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+ AY+   +   S  +F    +K+V  WN++I    +NR        F +M    +
Sbjct: 61  ATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDV 120

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  TL  +    +++  L  G+ +H  SI+ G ++D+ + N  ++MY KCG+   S  
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRK 180

Query: 130 TFSGMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLSSAVA-ASA 185
            F  M   ++ SWN +++G   +   N+ E+   + ++M     + D  ++SS +     
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDG 240

Query: 186 CLGELSYGKVIHALGIK----LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             G+  YG+ +H   +K    LG +    V +   LI MYS+   +    R F  M C++
Sbjct: 241 DKGKWDYGRELHCYIVKNELVLGLDSD--VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRN 298

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V SW A+I+G+  NG  +EA  L  +MQ++  +EP+  ++V+++  C+    L  GR +H
Sbjct: 299 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIH 358

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+A+R+ L  ++ + N+L+D YSK  SL  A  +F   +   D +SW+SMISG       
Sbjct: 359 GFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKG 418

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA- 408
                L+ +ML    +    T + IL +C+    +  G +I+   +       T+ + A 
Sbjct: 419 QEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFAC 478

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ M    G L  A   ++ +      S W  ++     +G  +     ++ + Q +  +
Sbjct: 479 IVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPEN 538

Query: 469 P 469
           P
Sbjct: 539 P 539



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 224/460 (48%), Gaps = 29/460 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK  R  H   +  G+  +S L    +  YA C     S   F  +   +   WN++++G
Sbjct: 39  LKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLING 98

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    +    F +M  S    D+ +LS+    S+ LG L  GK IH   I++G+   
Sbjct: 99  YAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSD 158

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK---FEEAFDLL 265
             V+  NS++SMY +CG+ E + + F  MT ++  SWN +I G+A++G     EE ++ +
Sbjct: 159 TVVA--NSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV 216

Query: 266 HEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSVHGYAIRR--LLGY--DLLMMNSLM 320
            +MQ M  V PD  T+ +L+ LC  D      GR +H Y ++   +LG   D+ +   L+
Sbjct: 217 KQMQ-MDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLI 275

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFS 367
           D YS+SN +     +F+ +   N + SW +MI+G            LF++M  +   + +
Sbjct: 276 DMYSRSNKVVVGRRVFDRMKCRN-VFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPN 334

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             +L+++LP+C+S   L  G+ IH + ++   +N     NAL+ MY  CG L +A  + +
Sbjct: 335 RVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFE 394

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             S   D   W+ +I     +G  QEAI  +  M  Q    PD +T V ++SAC    L 
Sbjct: 395 DDSLCKDAISWSSMISGYGLHGKGQEAILLYDKML-QAGIRPDMITTVGILSACSRSGLV 453

Query: 488 FEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSA 525
            EG +++   +    G++  ++    ++ M GR   +  A
Sbjct: 454 NEGLNIYSSVIND-YGIEPTLEIFACIVDMLGRAGQLDPA 492



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 177/366 (48%), Gaps = 20/366 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVM--GL 58
           GF++    + S+++ Y     FE S  +F E   ++  +WN +I    V   C       
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETW 213

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLK----QGRVVHCLSIK----AGMIADSSL 110
            F  +M  + +R D+ T   I S L   +  K     GR +HC  +K     G+ +D  L
Sbjct: 214 EFVKQMQMDEVRPDAYT---ISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHL 270

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSG 169
               ++MY++   +      F  M C +  SW  +++G + N   ++ L  FR+M    G
Sbjct: 271 GCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDG 330

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
            + + VSL S + A +    L  G+ IH   ++   E +  VS+ N+LI MYS+CG +++
Sbjct: 331 IEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR--KELNNEVSLCNALIDMYSKCGSLDS 388

Query: 230 AERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           A R F   + CKD +SW+++I G+ L+GK +EA  LL++  L   + PD+ T V ++S C
Sbjct: 389 ARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAI-LLYDKMLQAGIRPDMITTVGILSAC 447

Query: 289 ADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           + S L+ EG +++   I    +   L +   ++D   ++  L  A     A+        
Sbjct: 448 SRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSV 507

Query: 348 WNSMIS 353
           W +++S
Sbjct: 508 WGALVS 513


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 181/610 (29%), Positives = 290/610 (47%), Gaps = 126/610 (20%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GRSVH   I++ L   + +MN+LM FY+K+ SL  A  +F+ + P+    SWN++ISG  
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEM-PLKSTFSWNTLISGYA 87

Query: 357 KE--------MLYL---CSQFSFSTLLA-------------------------------- 373
           K+        +LY    C   S++ ++                                 
Sbjct: 88  KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS--- 430
           +L SC + ++L+ G+ IH + +KLG  +      +L++MY  CGD V A  +  R++   
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207

Query: 431 ---------------------------HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                                       + D   WN +I   +Q G+  EA+  F  M  
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR--- 520
           + +  PD+ TL +++SAC NLE    GK +H   L++       V NALI+MY +     
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 521 ------------------------------DIKSASTVFESCYNCNLCTWNCMISAFSQN 550
                                         ++K A  +F    + ++  W  MI  + QN
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                ALELFR +     EPN  ++ ++LS  + L +L HGKQIH      G      ++
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 608 SALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           +AL+ MY+                  K   +W+SMI A   HG G EAI LF  M + G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P   + + +LSAC+H GLV++G +YYN M E +++ P   H+ C++D+ GR+G LQEAY
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
            FI+++PI+P    WG++L++C  H +  + K  AE L  ++P N G Y++L+N+Y A G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 772 RWKDAVEIGK 781
           +W++A +  K
Sbjct: 628 KWENAAQTRK 637



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 152/602 (25%), Positives = 249/602 (41%), Gaps = 114/602 (18%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR VHC  IK G+     L N  +  YAK G L  +   F  M    T SWNT++SG   
Sbjct: 29  GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88

Query: 152 NNYPE--KCLLY-----------------------------FREMGWSGEQADNVSLSSA 180
               E  + LLY                             F +M          ++S+ 
Sbjct: 89  QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 181 VAASACLGELSYGKVIHALGIKLGYED----------------SPYV------------- 211
           +++ A    L  G+ IH+  +KLG                    P +             
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S  N+LIS+Y Q G  E A   F  M  +D+VSWN++I G++  G   EA  +  +M   
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR------------------------- 306
            S++PD  T+ +++S CA+   L  G+ +H Y +R                         
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 307 --------RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
                   R    +++   SL+D Y+K  ++  A  +FN +    D+V+W +MI G    
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD-RDVVAWTAMIVGYVQN 387

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF+ M+    + +  TL A+L   +S   LE GK IH   +K G S+     
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ MY   G++  A  +    +   +   W  +I+A  Q+G  +EAI  F+ M     
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERML-SVG 506

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKSA 525
             PD +T V V+SAC ++ L  +G+  + +  +      T    A +I +YGR   ++ A
Sbjct: 507 MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEA 566

Query: 526 STVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE----ISIVSILSAC 579
               ES     +   W  ++++   +K A++  +   R L  +P      +++ ++ SAC
Sbjct: 567 YLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC 626

Query: 580 TQ 581
            +
Sbjct: 627 GK 628



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 240/561 (42%), Gaps = 82/561 (14%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L++ Y+    FE S  L YE  + D V+W A+I    +       +  F +M+ E +  
Sbjct: 81  TLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPP 140

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
              T+  ++S+      L  GR +H   +K G+ +   +    +NMYAKCGD   ++  F
Sbjct: 141 SQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVF 200

Query: 132 SGMHCA-------------------------------DTVSWNTIMSGCLHNNYPEKCLL 160
             M                                  D VSWN+++SG     Y  + L+
Sbjct: 201 DRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALV 260

Query: 161 YFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            F +M      + DN +L+S ++A A L +L+ GK IHA  ++   E S   +V N+LIS
Sbjct: 261 IFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG--AVGNALIS 318

Query: 220 MYSQCGDIE---------------------------------AAERAFWGMTCKDVVSWN 246
           MY++ G +E                                  A   F  +  +DVV+W 
Sbjct: 319 MYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWT 378

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G+  NG + +A +L   M +    EP+  T+  ++S+ +   +L  G+ +H  AI+
Sbjct: 379 AMIVGYVQNGLWNDALELFRLM-VNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIK 437

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                   + N+L+  Y+K+ +++ A+ +F+      ++VSW SMI              
Sbjct: 438 AGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAIN 497

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMY 413
           LF+ ML +  +    T + +L +C     +E G+  +    ++     T+   A ++ +Y
Sbjct: 498 LFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLY 557

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMTQQQNASPDSV 472
              G L  A+  ++ +    D   W  ++ +C  + +   A +   + +      S   +
Sbjct: 558 GRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYL 617

Query: 473 TLVNVISACGNLELAFEGKSL 493
            L NV SACG  E A + + L
Sbjct: 618 ALANVYSACGKWENAAQTRKL 638



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 187/393 (47%), Gaps = 47/393 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  + ++ T  +L++ Y     FE + + F +  ++D+V+WN+MI+   +    +  L  
Sbjct: 202 RMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVI 261

Query: 61  FGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +M+ E  ++ D+ TL  I+SA   +  L  G+ +H   ++A      ++ N  ++MYA
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321

Query: 120 KCG---------------------------------DLNSSECTFSGMHCADTVSWNTIM 146
           K G                                 ++  +   F+ +   D V+W  ++
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            G + N      L  FR M   G + ++ +L++ ++ S+ L  L +GK IHA  IK G  
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            +P  SVTN+LI+MY++ G+I  A+R F      K++VSW ++I   A +G  +EA +L 
Sbjct: 442 STP--SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLF 499

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-----YAIRRLLGYDLLMMNSLM 320
             M L   ++PD  T V ++S C    L+ +GR  +      + I   L +   M    +
Sbjct: 500 ERM-LSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACM----I 554

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           D Y ++  L +A L   ++    D ++W S+++
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLA 587



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/404 (21%), Positives = 162/404 (40%), Gaps = 102/404 (25%)

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N+   S    +++     ++  F G+S+H   +K  + L   + N L+T Y +   ++ A
Sbjct: 5   NSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFA 64

Query: 526 STVFESCYNCNLCTWNCMISAFS-QNKAEV------------------------------ 554
             VF+     +  +WN +IS ++ Q   EV                              
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A+ +F  +      P++ ++ ++LS+C     L  G++IH  V  LG      ++++LL
Sbjct: 125 NAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLL 184

Query: 612 DMYSNC----------------------------------------------KSNAAWSS 625
           +MY+ C                                              +   +W+S
Sbjct: 185 NMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS 244

Query: 626 MISAYGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
           MIS Y   G   EA+ +F +M N   ++P   ++ S+LSAC++   ++ G Q     +  
Sbjct: 245 MISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQ-----IHA 299

Query: 685 YDVRPETEHHVCI----VDMLGRSGKLQEAYEFIK-----NLPIQPKPGVWGAMLSACSH 735
           Y +R ETE    +    + M  +SG ++ A   ++     NL I      + ++L   + 
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNII----AFTSLLDGYTK 355

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            G+ K  +   E+  KL   +V  + ++   YV  G W DA+E+
Sbjct: 356 LGNVKPAR---EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALEL 396


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 174/533 (32%), Positives = 281/533 (52%), Gaps = 44/533 (8%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T   ++  CA    L +   +H + +       + +  +L+D YSK      A L+F+ +
Sbjct: 30  TFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQM 89

Query: 340 APMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
            P+  LVSWNS+IS            G+ K+M  L  + S +T    L SC+ P+    G
Sbjct: 90  -PIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSLPQ----G 144

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            SIH +  KLG   +    N++M MYI    +  A S+   +   S  S W I++     
Sbjct: 145 LSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVS-WTIILGGYLS 203

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGL 504
            G   +    F  M + Q   PDS+  VN+IS C   GNL LA     +H L LKS    
Sbjct: 204 AGDVAKVFAVFNQM-RCQCVGPDSIVFVNLISCCKLSGNLLLAM---LVHSLLLKSGFDH 259

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
              + N L+ MY +C+D+ SA  VF++ +  ++  W  MIS ++Q      AL LF  L 
Sbjct: 260 KDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLL 319

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
                PNE+++ ++LSAC ++G LR G++I  ++   G   +  + ++L+ M+  C    
Sbjct: 320 RTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIK 379

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLLSAC 665
                      K  A WS+MI+ Y  HG G EA+ LFH+M N  GI+P      S+L AC
Sbjct: 380 KAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC 439

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGL+++GL+Y+ +M +++ + P  +H+ C+VD+LGR+G ++ A   I+ +P+  +  V
Sbjct: 440 SHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARV 499

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           W   LSAC  H + ++G+  A+ LF LEP + G ++ ++N+Y ++G+WK+A +
Sbjct: 500 WAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAK 552



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 169/353 (47%), Gaps = 8/353 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF AH+   T+L+  YS    F S+  +F +   K +V+WN++I+A   +  +       
Sbjct: 58  GFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGIL 117

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+   S T    +++ +    L QG  +H    K G+     L N  ++MY + 
Sbjct: 118 KQMQLLGLELSSATFTGFLASCS----LPQGLSIHGYITKLGLDLHLPLANSIMSMYIRL 173

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ +   F  +H    VSW  I+ G L      K    F +M       D++   + +
Sbjct: 174 NQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLI 233

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +     G L    ++H+L +K G++      + N L++MY++C D+ +A R F  +  K 
Sbjct: 234 SCCKLSGNLLLAMLVHSLLLKSGFDHKD--PIDNLLVAMYAKCKDLVSARRVFDAVHEKS 291

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  W ++I G+A  G   EA  L + M L  +  P+  T+ T++S CA+   LR G  + 
Sbjct: 292 VFLWTSMISGYAQFGYPNEALHLFN-MLLRTASRPNELTLATVLSACAEMGSLRMGEEIE 350

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y +   LG DL +  SL+  + K  S+ KA+ LF  I P  DL  W++MI+G
Sbjct: 351 QYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERI-PNKDLAVWSAMING 402



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 232/517 (44%), Gaps = 26/517 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+     T   ++ A  ++  L+    +H   +  G  A   +    V++Y+KC   +S+
Sbjct: 23  GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M     VSWN+I+S    + + ++     ++M   G +  + + +  +A+ +  
Sbjct: 83  RLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS-- 140

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  G  IH    KLG +   ++ + NS++SMY +   I+ A   F+ +  K +VSW  
Sbjct: 141 --LPQGLSIHGYITKLGLD--LHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTI 196

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           I+ G+   G   + F + ++M+  + V PD    V LIS C  S  L     VH   ++ 
Sbjct: 197 ILGGYLSAGDVAKVFAVFNQMRC-QCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKS 255

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
              +   + N L+  Y+K   L  A  +F+A+   +  + W SMISG            L
Sbjct: 256 GFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFL-WTSMISGYAQFGYPNEALHL 314

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  +L   S+ +  TL  +L +C    SL  G+ I  + L  G  ++     +L+HM+  
Sbjct: 315 FNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCK 374

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG +  A +L +RI  N D + W+ +I     +G  +EA+  F  M  +    PD++   
Sbjct: 375 CGSIKKAQALFERIP-NKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYT 433

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESC 532
           +V+ AC +  L  +G   +  +++   G++  +Q+   L+ + GR   ++ A  T+ E  
Sbjct: 434 SVLLACSHSGLIEDGLK-YFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMP 492

Query: 533 YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPN 568
                  W   +SA ++ +  E+         + EP 
Sbjct: 493 VLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPR 529



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 150/296 (50%), Gaps = 2/296 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   HLP + S+++ Y  ++  + +L++FY    K +V+W  ++   +    V      F
Sbjct: 155 GLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVF 214

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  + +  DS   + ++S       L    +VH L +K+G      + N+ V MYAKC
Sbjct: 215 NQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKC 274

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL S+   F  +H      W +++SG     YP + L  F  +  +  + + ++L++ +
Sbjct: 275 KDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVL 334

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +G L  G+ I    +  G      + V  SLI M+ +CG I+ A+  F  +  KD
Sbjct: 335 SACAEMGSLRMGEEIEQYILLNGLGSD--LRVQTSLIHMFCKCGSIKKAQALFERIPNKD 392

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +  W+A+I+G+A++G  +EA +L H+MQ    ++PD     +++  C+ S L+ +G
Sbjct: 393 LAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDG 448



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 15/114 (13%)

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           +E +   +L AC +L  L    ++H H+   GFQ + F+ +AL+D+YS C          
Sbjct: 27  SEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVF 86

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                KS  +W+S+ISA+       ++  +  +M   G+  + ++    L++CS
Sbjct: 87  DQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS 140


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 303/599 (50%), Gaps = 33/599 (5%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           + N +I MY +C   E A + F  +  ++  SW+ +++ +  N  ++EA ++  EM + +
Sbjct: 4   LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEM-VRK 62

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            +  D  T+ ++++ C   L + EGR V   A       D+++  SL+  ++K   L +A
Sbjct: 63  EISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEA 122

Query: 333 ELLFNAIAPMNDLVSWNSMISGLF---KEMLYLCSQFSFS---------TLLAILPSCNS 380
           E +F ++  M D++S  +MI       K  L L + +            T  AIL +C+S
Sbjct: 123 ESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSS 182

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
           P+ L  GK IH   L+     N    NAL+ MY  CG L  + SL   +    D   WN 
Sbjct: 183 PDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMD-VKDVVSWNA 241

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I A T  GH ++A   F  M    + +PD  T  +++ AC + +   +G+ LH      
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMCTLGH-TPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               D  +QN LI+M+ RC  ++SA   F S     L  WN M++A++Q      AL L+
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLY 360

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           +++    F P+  +  S++ +C  LG LR GK IH      GF+++  + +AL++MY+ C
Sbjct: 361 KNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKC 420

Query: 618 KSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
            S A               +WS+MI+A   HG   EA+EL H M   GI   + +  S+L
Sbjct: 421 GSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVL 480

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            ACSH G + EG+ Y+  + +++ +  + E+ V  +D+LGR+G L+EA   +  +P +  
Sbjct: 481 HACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVS 540

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
                 +L  C  HGD + GK + + +  LEPEN G Y+ L+NMY A GRW D  ++ +
Sbjct: 541 FVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRR 599



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 159/614 (25%), Positives = 283/614 (46%), Gaps = 64/614 (10%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FLA++     ++  Y      E +  +F     ++  +W+ ++   V+N      L  + 
Sbjct: 3   FLANM-----IIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYK 57

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EMV + I  D+ TL  +++A T++  +++GR+V   + + G   D  +    ++++AKCG
Sbjct: 58  EMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCG 117

Query: 123 DLNSSECTFSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            L  +E  F  M    D +S   ++   + +   +  L  + +M   G + D  + ++ +
Sbjct: 118 CLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L  GK IH   ++  +  +  +SV N+LI+MY++CG ++ ++  F  M  KD
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGN--ISVRNALITMYAKCGSLKDSKSLFLTMDVKD 235

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWNA+I  + L G  ++AF L H M  +    PDI T  +++  CA    L +GR +H
Sbjct: 236 VVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT-PDIYTFSSILGACASPKRLEDGRMLH 294

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
                R    D  M N+L+  +++  SL  A   F +I    +L +WN+M++        
Sbjct: 295 VRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEK-KELGAWNTMLAAYAQFDKG 353

Query: 355 -----LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                L+K ML   +   +F+FS+   ++ SC S  +L  GK IH      GF  + I  
Sbjct: 354 KDALFLYKNMLLEGFTPDRFTFSS---VVDSCASLGALREGKFIHECSTSCGFEKDVILG 410

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL++MY  CG L  A      IS N D   W+ +I A  Q+GH +EA++    +   Q 
Sbjct: 411 TALVNMYAKCGSLADAKKSFDGIS-NKDVVSWSAMIAASAQHGHAEEALE-LSHLMNLQG 468

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
            + + VT  +V+ AC +    +EG   + + L    G++   +N    I + GR   +K 
Sbjct: 469 IAQNEVTASSVLHACSHGGRLYEGID-YFMGLSQDFGIERDEENTVGFIDLLGRAGWLKE 527

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV 584
           A  V  +                               + F+ + +++V++L  C   G 
Sbjct: 528 AEHVLHT-------------------------------MPFKVSFVALVTLLGGCKVHGD 556

Query: 585 LRHGKQIHGHVFHL 598
           +R GK +   +  L
Sbjct: 557 VRRGKALTKRIVAL 570



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 240/498 (48%), Gaps = 22/498 (4%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+ L N+ + MY KC     +   F  +   +  SW+ ++   + N   ++ L  ++EM 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
                 D  +LSS +AA   L ++  G+++     +LG+E    V V  SLI ++++CG 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKD--VVVATSLIHLFAKCGC 118

Query: 227 IEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           +E AE  F  M   +D++S  A+I  +  +GK + A D   +M+  + +EPD  T   ++
Sbjct: 119 LEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMR-SQGLEPDAFTYAAIL 177

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
             C+    L +G+ +H + +      ++ + N+L+  Y+K  SL  ++ LF  +  + D+
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTM-DVKDV 236

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
           VSWN+MI+             LF  M  L       T  +IL +C SP+ LE G+ +H  
Sbjct: 237 VSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVR 296

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
               GF  +    N L+ M+  CG L +A      I    +   WN ++ A  Q    ++
Sbjct: 297 ITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIE-KKELGAWNTMLAAYAQFDKGKD 355

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A+  +K+M   +  +PD  T  +V+ +C +L    EGK +H  +       D  +  AL+
Sbjct: 356 ALFLYKNML-LEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALV 414

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEI 570
            MY +C  +  A   F+   N ++ +W+ MI+A +Q+     ALEL   +  +    NE+
Sbjct: 415 NMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEV 474

Query: 571 SIVSILSACTQLGVLRHG 588
           +  S+L AC+  G L  G
Sbjct: 475 TASSVLHACSHGGRLYEG 492



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 228/521 (43%), Gaps = 68/521 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF   +  +TSL+  ++     E + ++F      +D+++  AMI A V +    + L  
Sbjct: 98  GFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDT 157

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M  +G+  D+ T   I+ A +  + L  G+ +H   +++    + S+ N  + MYAK
Sbjct: 158 YWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAK 217

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  S+  F  M   D VSWN +++      + +     F  M   G   D  + SS 
Sbjct: 218 CGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSI 277

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A    L  G+++H      G++     ++ N+LISM+++CG +E+A R F+ +  K
Sbjct: 278 LGACASPKRLEDGRMLHVRITARGFDRD--FAMQNNLISMFTRCGSLESARRYFYSIEKK 335

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++ +WN ++  +A   K ++A   L++  L+    PD  T  +++  CA    LREG+ +
Sbjct: 336 ELGAWNTMLAAYAQFDKGKDAL-FLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFI 394

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
           H  +       D+++  +L++ Y+K  SL+ A+  F+ I+   D+VSW++MI+       
Sbjct: 395 HECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISN-KDVVSWSAMIA------- 446

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                       A     ++ E+LE     H   L+ G + N +  ++++H         
Sbjct: 447 ------------ASAQHGHAEEALELS---HLMNLQ-GIAQNEVTASSVLH--------- 481

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
                                  AC+  G   E I  F  ++Q      D    V  I  
Sbjct: 482 -----------------------ACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDL 518

Query: 481 CGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYGRCR 520
            G      E +  LH +  K           AL+T+ G C+
Sbjct: 519 LGRAGWLKEAEHVLHTMPFKVSF-------VALVTLLGGCK 552



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 3/249 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF        +L++ ++     ES+   FY    K++  WN M+ A  +       L  
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M+ EG   D  T   +V +   +  L++G+ +H  S   G   D  L    VNMYAK
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAK 419

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L  ++ +F G+   D VSW+ +++    + + E+ L     M   G   + V+ SS 
Sbjct: 420 CGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSV 479

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +  G L Y  + + +G+   +        T   I +  + G ++ AE     M  K
Sbjct: 480 LHACSHGGRL-YEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 538

Query: 241 DVVSWNAII 249
             VS+ A++
Sbjct: 539 --VSFVALV 545



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 16/154 (10%)

Query: 603 NSFISSALLDMYSNCKS--------------NA-AWSSMISAYGYHGKGWEAIELFHEMC 647
           ++F+++ ++ MY  CKS              NA +WS ++  Y  +    EA+E++ EM 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
              I     ++ S+L+AC+    V+EG +      EE     +      ++ +  + G L
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEG-RMVQRKAEELGFEKDVVVATSLIHLFAKCGCL 119

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           +EA    +++          AM+ A   HG   +
Sbjct: 120 EEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDL 153


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 171/518 (33%), Positives = 278/518 (53%), Gaps = 37/518 (7%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI---- 352
           G+ VHG+ ++     D+ + N+L+  YS+  SL+ A LLF+ I    D+VSW++MI    
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIEN-KDVVSWSTMIRSYD 201

Query: 353 -SGLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
            SGL  E L L           S   +++I         L+ GK++H + ++ G    + 
Sbjct: 202 RSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKS- 260

Query: 405 GV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           GV    AL+ MY+ C +L  A  +   +S  S  S W  +I A     +  E ++ F  M
Sbjct: 261 GVPLCTALIDMYVKCENLAYARRVFDGLSKASIIS-WTAMIAAYIHCNNLNEGVRLFVKM 319

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
             +    P+ +T+++++  CG       GK LH   L++   L   +  A I MYG+C D
Sbjct: 320 LGE-GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGD 378

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           ++SA +VF+S  + +L  W+ MIS+++QN     A ++F H+      PNE ++VS+L  
Sbjct: 379 VRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMI 438

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C + G L  GK IH ++   G + +  + ++ +DMY+NC               +  + W
Sbjct: 439 CAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMW 498

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++MIS +  HG G  A+ELF EM   G+ P   + I  L ACSHSGL+ EG + ++ M+ 
Sbjct: 499 NAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVH 558

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
           E+   P+ EH+ C+VD+LGR+G L EA+E IK++P++P   V+G+ L+AC  H + K+G+
Sbjct: 559 EFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGE 618

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             A+    LEP   GY + +SN+Y +  RW D   I +
Sbjct: 619 WAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRR 656



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 244/574 (42%), Gaps = 48/574 (8%)

Query: 18  SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL 77
           SN SY     AL  E+ + +    + +IT+ ++N C       +  M       D+  + 
Sbjct: 71  SNCSYRVPLAAL--ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIP 128

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
            ++ A   +     G+ VH   +K G   D  +CN  + MY++ G L  +   F  +   
Sbjct: 129 SVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENK 188

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D VSW+T++     +   ++ L   R+M     +   + + S     A L +L  GK +H
Sbjct: 189 DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMH 248

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  ++ G      V +  +LI MY +C ++  A R F G++   ++SW A+I  +     
Sbjct: 249 AYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNN 308

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
             E   L  +M L   + P+  T+++L+  C  +  L  G+ +H + +R      L++  
Sbjct: 309 LNEGVRLFVKM-LGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLAT 367

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           + +D Y K   +  A  +F++     DL+ W++MIS             +F  M     +
Sbjct: 368 AFIDMYGKCGDVRSARSVFDSFKS-KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T++++L  C    SLE GK IH +  K G   + I   + + MY NCGD+  A  L
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRL 486

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
               + + D S WN +I     +GH + A++ F+ M +    +P+ +T +  + AC +  
Sbjct: 487 FAEAT-DRDISMWNAMISGFAMHGHGEAALELFEEM-EALGVTPNDITFIGALHACSHSG 544

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L  EGK L    +    G   +V++                             + CM+ 
Sbjct: 545 LLQEGKRLFHKMVHEF-GFTPKVEH-----------------------------YGCMVD 574

Query: 546 AFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
              +      A EL + +   PN     S L+AC
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAAC 608



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 226/485 (46%), Gaps = 24/485 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+  YS V     +  LF +  NKDVV+W+ MI +   +  +   L   
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS--SLCNVFVNMYA 119
            +M    ++     ++ I   L ++  LK G+ +H   ++ G    S   LC   ++MY 
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSLS 178
           KC +L  +   F G+  A  +SW  +++  +H NN  E   L+ + +G  G   + +++ 
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG-EGMFPNEITML 332

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S V      G L  GK++HA  ++ G+  S  + +  + I MY +CGD+ +A   F    
Sbjct: 333 SLVKECGTAGALELGKLLHAFTLRNGFTLS--LVLATAFIDMYGKCGDVRSARSVFDSFK 390

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD++ W+A+I  +A N   +EAFD+   M     + P+  T+V+L+ +CA +  L  G+
Sbjct: 391 SKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC-GIRPNERTMVSLLMICAKAGSLEMGK 449

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H Y  ++ +  D+++  S +D Y+    +  A  LF A A   D+  WN+MISG    
Sbjct: 450 WIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLF-AEATDRDISMWNAMISGFAMH 508

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIG 405
                   LF+EM  L    +  T +  L +C+    L+ GK + H    + GF+     
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEH 568

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQE-AIKTFKSMT 462
              ++ +    G L  A  L++ +    + + +   + AC   +N    E A K F S+ 
Sbjct: 569 YGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLE 628

Query: 463 QQQNA 467
             ++ 
Sbjct: 629 PHKSG 633



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 18/147 (12%)

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGK 589
           Y+ N    + +I+++ +N     A +++ ++     E+    I S+L AC  +     G+
Sbjct: 85  YSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQ 144

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHG 634
           ++HG V   GF  + F+ +AL+ MYS   S A               +WS+MI +Y   G
Sbjct: 145 EVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSG 204

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISL 661
              EA++L  +M    ++P++  +IS+
Sbjct: 205 LLDEALDLLRDMHVMRVKPSEIGMISI 231



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    +   TS +  Y+N    +++  LF E  ++D+  WNAMI+    +      L  
Sbjct: 458 QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALEL 517

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F EM   G+  +  T +  + A +    L++G R+ H +  + G           V++  
Sbjct: 518 FEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLG 577

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
           + G L+ +      M     ++ + + ++ C LH N
Sbjct: 578 RAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKN 613


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 201/729 (27%), Positives = 357/729 (48%), Gaps = 38/729 (5%)

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           RF  T L ++  +L     LK+G  VH   IK G+  D  L N  + +YAKC  +  +  
Sbjct: 15  RFRETCLQVL--SLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARH 72

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D VSW T++S    N +  + L  F  M  SG+  +  +LSSA+ + + LGE
Sbjct: 73  LFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGE 132

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             +G  IHA  +KLG E +  +  T  L+ +Y++C       +    +   DVVSW  +I
Sbjct: 133 FEFGAKIHASVVKLGLELNHVLGTT--LVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMI 190

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRL 308
                  K+ EA  L  +M +   + P+  T V L+ + +   L +  G+ +H   I   
Sbjct: 191 SSLVETSKWSEALQLYVKM-IEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFG 249

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLC 363
           +  +L++  +++  Y+K   +  A +  +   P  D+  W S+ISG       +E +   
Sbjct: 250 VEMNLMLKTAIICMYAKCRRMEDA-IKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNAL 308

Query: 364 SQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                S +L       ++L + +S  SLE G+  H   + +G   +    NAL+ MY+ C
Sbjct: 309 VDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKC 368

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
                      R     +   W  +I    ++G  +E+++ F  M Q     P+S TL  
Sbjct: 369 SHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEM-QAAGVQPNSFTLST 427

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC  ++   + K LHG  +K+ + +D  V NAL+  Y        A +V     + +
Sbjct: 428 ILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRD 487

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + T+  + +  +Q      AL +  H+   E + +E S+ S +SA   LG++  GKQ+H 
Sbjct: 488 IITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHC 547

Query: 594 HVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWE 638
           + F  GF+  + +S++L+  YS C S                 +W+ +IS    +G   +
Sbjct: 548 YSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISD 607

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+  F +M  +G++P   + +SL+ ACS   L+++GL Y+ +M + Y + P+ +H+VC+V
Sbjct: 608 ALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLV 667

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+LGR G+L+EA   I+ +P +P   ++  +L+AC+ HG+  +G+ +A    +L+P +  
Sbjct: 668 DLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPA 727

Query: 759 YYISLSNMY 767
            Y+ L+++Y
Sbjct: 728 IYLLLASLY 736



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 173/699 (24%), Positives = 304/699 (43%), Gaps = 41/699 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L  S +LL  Y+       +  LF E  ++DVV+W  +++A   N+     L  F
Sbjct: 46  GLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLF 105

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G   +  TL   + + + +   + G  +H   +K G+  +  L    V++Y KC
Sbjct: 106 DMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKC 165

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                     + +   D VSW T++S  +  +   + L  + +M  +G   +  +    +
Sbjct: 166 DCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLL 225

Query: 182 AASACLG-ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              + LG    YGKV+H+  I  G E +  + +  ++I MY++C  +E A +        
Sbjct: 226 GMPSFLGLGKGYGKVLHSQLITFGVEMN--LMLKTAIICMYAKCRRMEDAIKVSQQTPKY 283

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV  W +II GF  N +  EA + L +M+L   + P+  T  +L++  +  L L  G   
Sbjct: 284 DVCLWTSIISGFVQNSQVREAVNALVDMEL-SGILPNNFTYASLLNASSSVLSLELGEQF 342

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           H   I   L  D+ + N+L+D Y K S++ +     F  IA + +++SW S+I+G     
Sbjct: 343 HSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIA-LPNVISWTSLIAGFAEHG 401

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF EM     Q +  TL  IL +C+  +S+   K +H + +K     +    N
Sbjct: 402 FEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGN 461

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y   G    A+S++  ++H  D   +  +     Q G  + A++    M   +  
Sbjct: 462 ALVDAYAGGGMADEAWSVIGMMNHR-DIITYTTLAARLNQQGDHEMALRVITHMCNDE-V 519

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D  +L + ISA   L +   GK LH  + KS       V N+L+  Y +C  ++ A  
Sbjct: 520 KMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYR 579

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGV 584
           VF+     +  +WN +IS  + N     AL  F  +     +P+ ++ +S++ AC+Q  +
Sbjct: 580 VFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSL 639

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           L  G      + +    E ++  +  LD Y           ++   G  G+  EA+ +  
Sbjct: 640 LNQG------LDYFYSMEKTYHITPKLDHY---------VCLVDLLGRGGRLEEAMGVIE 684

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
            M     +P      +LL+AC+  G V  G       LE
Sbjct: 685 TM---PFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLE 720



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 2/273 (0%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +    +L+ AY+     + + ++     ++D++T+  +     +     M L     M  
Sbjct: 457 MAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCN 516

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           + ++ D  +L   +SA   +  ++ G+ +HC S K+G    +S+ N  V+ Y+KCG +  
Sbjct: 517 DEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRD 576

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   D VSWN ++SG   N      L  F +M  +G + D+V+  S + A + 
Sbjct: 577 AYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACS- 635

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW 245
            G L    + +   ++  Y  +P +     L+ +  + G +E A      M  K D V +
Sbjct: 636 QGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIY 695

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
             +++   L+G      D+      +   +P I
Sbjct: 696 KTLLNACNLHGNVPLGEDMARRCLELDPCDPAI 728


>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
 gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
          Length = 662

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 186/618 (30%), Positives = 303/618 (49%), Gaps = 46/618 (7%)

Query: 196 IHALGIKLGYE---DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW-NAIIDG 251
           +HAL +K G+    DS ++     L+  Y  CG    A      M     VS  N ++  
Sbjct: 32  LHALLLKSGHLLHCDSIHL-----LLGSYCACGRPFDAHNLLVQMPQPPPVSVSNTLLRS 86

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +   G   +A  L  +M+       D  T       CAD    R GR+VHG A+    G 
Sbjct: 87  YTGLGFNRQALALYSQMRAF-----DHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGG 141

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D  + N+L+  Y +   +  AE +F A+      VSWN++I+G            +F+ M
Sbjct: 142 DGYVQNALVSMYMRCRDVVSAEAVFGALRSRTT-VSWNTVITGCVKDGRAERALEVFETM 200

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +        +T++++LP+C     L  G+++H   +  G  N     NAL+ MY  C  L
Sbjct: 201 VGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGKCRSL 260

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +    S++ D   W  +I A   N H  +A      M     A P++VT+V+++S
Sbjct: 261 EDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLS 320

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L      K  H L ++  +G DT V+ AL+  Y +C  +     V E        T
Sbjct: 321 ACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMGMIDMVVEKGSR-RTET 379

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN  IS ++  +   +AL LF+ +  E   P+  ++ S++ A  +   L   K IH  + 
Sbjct: 380 WNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESADLVQAKNIHCCLL 439

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G   ++ I++ L+++Y+                 K   AW+++I+ YG HG    AI 
Sbjct: 440 IRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAIL 499

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           L+  M   G+ P   ++ SL+ +CSH+G+VDEGL+ +N+M   + + P  EH++C+VDML
Sbjct: 500 LYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGVHGLMPNAEHYLCLVDML 559

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G+++EAY  I+++P +P   VW A+L AC  H + + G+  A+ LF+LEP+NVG Y+
Sbjct: 560 GRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEVAAKHLFELEPDNVGNYV 619

Query: 762 SLSNMYVALGRWKDAVEI 779
            L  +Y A  RW D  ++
Sbjct: 620 LLGKVYAAADRWSDVQDL 637



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 247/523 (47%), Gaps = 36/523 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD  T      A   +   + GR VH  ++ AG   D  + N  V+MY +C D+ S+E  
Sbjct: 106 FDHLTFTFAAKACADLRRRRHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAV 165

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +    TVSWNT+++GC+ +   E+ L  F  M   G   D  ++ S + A A   +L
Sbjct: 166 FGALRSRTTVSWNTVITGCVKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDL 225

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAII 249
             G+ +H L +  G  +  Y +V N+LI MY +C  +E A+R F   +  KDVVSW A+I
Sbjct: 226 HMGRAVHRLAVVRGLGN--YAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMI 283

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             + LN    +AF L  EM +    +P+  T+V L+S C   L  +  +  H   IR  L
Sbjct: 284 GAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGL 343

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G D ++  +L+D Y+K   +   +++    +   +  +WN+ ISG            LFK
Sbjct: 344 GSDTVVETALVDCYAKCGYMGMIDMVVEKGSRRTE--TWNAAISGYTHREQGKKALALFK 401

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +ML    +   +T+ +++P+      L   K+IHC  L  G   +T     L+++Y   G
Sbjct: 402 QMLAESVRPDSATMASVIPAYAESADLVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAG 461

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL  A+ L Q +    D   W  VI     +GH Q AI  +  M  +   +P++VT+ ++
Sbjct: 462 DLGVAWELFQCLPEK-DVVAWTTVIAGYGMHGHAQTAILLYSRMI-EMGVTPNTVTMASL 519

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-----LITMYGRCRDIKSASTVFESC 532
           + +C +  +  EG  L       + G+   + NA     L+ M GR   I+ A  + +  
Sbjct: 520 MYSCSHAGMVDEGLRL----FNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDM 575

Query: 533 -YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEI 570
            +  +   W+ ++ A   ++     EV A  LF   E EP+ +
Sbjct: 576 PFEPSTSVWSALLGACVLHENVEFGEVAAKHLF---ELEPDNV 615



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 160/618 (25%), Positives = 283/618 (45%), Gaps = 62/618 (10%)

Query: 69  IRFDSTTLLIIVSALTQMNCL--KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +R  S+   ++ +   Q++ L  K G ++HC SI           ++ +  Y  CG    
Sbjct: 15  LRSKSSATPLVPTTAAQLHALLLKSGHLLHCDSI-----------HLLLGSYCACGRPFD 63

Query: 127 SECTFSGMHCADTVSW-NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           +      M     VS  NT++       +  + L  + +M       D+++ + A  A A
Sbjct: 64  AHNLLVQMPQPPPVSVSNTLLRSYTGLGFNRQALALYSQM----RAFDHLTFTFAAKACA 119

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L    +G+ +H   +  G+    YV   N+L+SMY +C D+ +AE  F  +  +  VSW
Sbjct: 120 DLRRRRHGRAVHGRALTAGFGGDGYVQ--NALVSMYMRCRDVVSAEAVFGALRSRTTVSW 177

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           N +I G   +G+ E A ++   M + R V  D ATVV+++  CA +  L  GR+VH  A+
Sbjct: 178 NTVITGCVKDGRAERALEVFETM-VGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAV 236

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
            R LG    + N+L+D Y K  SL  A+ +F+  +   D+VSW +MI             
Sbjct: 237 VRGLGNYAAVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAF 296

Query: 354 GLFKEMLYLC-SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            L  EML    +Q +  T++ +L +C S  S +  K  H   ++LG  ++T+   AL+  
Sbjct: 297 ALGSEMLVTSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDC 356

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG +     ++++ S  ++T  WN  I   T     ++A+  FK M   ++  PDS 
Sbjct: 357 YAKCGYMGMIDMVVEKGSRRTET--WNAAISGYTHREQGKKALALFKQML-AESVRPDSA 413

Query: 473 TLVNVISACGNLELAFEGKSLH-GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           T+ +VI A        + K++H  L ++  +G  T +   LI +Y +  D+  A  +F+ 
Sbjct: 414 TMASVIPAYAESADLVQAKNIHCCLLIRGCLG-STDIATGLINVYAKAGDLGVAWELFQC 472

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEF--EPNEISIVSILSACTQLGVLRHG 588
               ++  W  +I+ +  +     A+ L+ R +E    PN +++ S++ +C+  G++  G
Sbjct: 473 LPEKDVVAWTTVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEG 532

Query: 589 KQIHGHVFHL-GFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
            ++   +  + G   N+     L+DM                 G  G+  EA  L  +M 
Sbjct: 533 LRLFNDMRGVHGLMPNAEHYLCLVDM----------------LGRAGRIEEAYRLIQDM- 575

Query: 648 NSGIRPTKSSVISLLSAC 665
                P+ S   +LL AC
Sbjct: 576 --PFEPSTSVWSALLGAC 591



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 218/486 (44%), Gaps = 56/486 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L++ Y       S+ A+F    ++  V+WN +IT CV++      L  F
Sbjct: 138 GFGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCVKDGRAERALEVF 197

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MV  G+  D  T++ ++ A  Q   L  GR VH L++  G+   +++ N  ++MY KC
Sbjct: 198 ETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAAVKNALIDMYGKC 257

Query: 122 GDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
             L  ++  F    +  D VSW  ++   + N++  K      EM  + E Q + V++  
Sbjct: 258 RSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEAQPNAVTMVH 317

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT- 238
            ++A   L    + K  HAL I+LG      V    +L+  Y++CG        + GM  
Sbjct: 318 LLSACTSLLSGKHAKCTHALCIRLGLGSDTVVE--TALVDCYAKCG--------YMGMID 367

Query: 239 ------CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
                  +   +WNA I G+    + ++A  L  +M L  SV PD AT+ ++I   A+S 
Sbjct: 368 MVVEKGSRRTETWNAAISGYTHREQGKKALALFKQM-LAESVRPDSATMASVIPAYAESA 426

Query: 293 LLREGRSVH-GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
            L + +++H    IR  LG    +   L++ Y+K+  L  A  LF  + P  D+V+W ++
Sbjct: 427 DLVQAKNIHCCLLIRGCLG-STDIATGLINVYAKAGDLGVAWELFQCL-PEKDVVAWTTV 484

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           I+G            L+  M+ +    +  T+ +++ SC+    ++ G         L  
Sbjct: 485 IAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEG---------LRL 535

Query: 400 SNNTIGVNALM----------HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--Q 447
            N+  GV+ LM           M    G +  A+ L+Q +     TS W+ ++ AC   +
Sbjct: 536 FNDMRGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHE 595

Query: 448 NGHFQE 453
           N  F E
Sbjct: 596 NVEFGE 601


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/537 (31%), Positives = 277/537 (51%), Gaps = 36/537 (6%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P + T   L+ LCA    L  GR+VH     R L  + +   +L + Y K    + A  +
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--------------TLLAILPSCNSP 381
           F+ + P  D V+WN++++G  +  L   +  +                TL+++LP+C   
Sbjct: 74  FDRM-PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L   + +H + L+ G         A++  Y  CG + AA ++   +   +  S WN +
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVS-WNAM 191

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I     NG+  EA+  F  M Q+     D+  L   + ACG L    E + +H L ++  
Sbjct: 192 IDGYADNGNATEAMALFWRMVQEGVDVTDASVLA-ALQACGELGYLDEVRRVHELLVRVG 250

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL-CTWNCMISAFSQNKAEVRALELF 560
           +  +  V NALIT Y +C+    A+ VF    N     +WN MI  F+QN+    A  LF
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLF 310

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             ++ E   P+  ++VS++ A   +      + IHG+       ++ ++ +AL+DMYS C
Sbjct: 311 ARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKC 370

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +    W++MI  YG HG G  A+ELF EM  +G  P +++ +S+L
Sbjct: 371 GRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVL 430

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           +ACSH+GLVDEG +Y+ +M ++Y + P  EH+  +VD+LGR+GKL EA+ FIKN+PI+P 
Sbjct: 431 AACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPG 490

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             V+GAML AC  H + ++ ++ A+++F+L PE   Y++ L+N+Y     WKD   +
Sbjct: 491 ISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARV 547



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 216/461 (46%), Gaps = 20/461 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +    ST+L   Y        +  +F    ++D V WNA++     N      +  
Sbjct: 45  RGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEA 104

Query: 61  FGEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
              M  E  G R DS TL+ ++ A      L   R VH  +++AG+    ++    ++ Y
Sbjct: 105 VVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAY 164

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            KCG + ++   F  M   ++VSWN ++ G   N    + +  F  M   G    + S+ 
Sbjct: 165 CKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVL 224

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +A+ A   LG L   + +H L +++G   S  VSVTN+LI+ Y++C   + A + F  + 
Sbjct: 225 AALQACGELGYLDEVRRVHELLVRVGL--SSNVSVTNALITTYAKCKRADLAAQVFNELG 282

Query: 239 CKDV-VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            K   +SWNA+I GF  N   E+A  L   MQL  +V PD  T+V++I   AD     + 
Sbjct: 283 NKKTRISWNAMILGFTQNECPEDAERLFARMQL-ENVRPDSFTLVSVIPAVADISDPLQA 341

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           R +HGY+IR  L  D+ ++ +L+D YSK   +S A  LF++ A    +++WN+MI G   
Sbjct: 342 RWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDS-ARDRHVITWNAMIHGYGS 400

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTI 404
                    LF+EM    S  + +T L++L +C+    ++ G K     +   G      
Sbjct: 401 HGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGME 460

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
               ++ +    G L  A+S ++ +      S +  ++ AC
Sbjct: 461 HYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGAC 501



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 214/468 (45%), Gaps = 25/468 (5%)

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
           T LL + +A      L  GR VH      G+ ++S       NMY KC     +   F  
Sbjct: 20  TALLKLCAARAD---LATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDR 76

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS--GEQADNVSLSSAVAASACLGELS 191
           M   D V+WN +++G   N  P   +     M     GE+ D+V+L S + A A    L 
Sbjct: 77  MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + +HA  ++ G ++   V+V+ +++  Y +CG +EAA   F  M  ++ VSWNA+IDG
Sbjct: 137 ACREVHAFALRAGLDE--LVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG   EA  L   M +   V+   A+V+  +  C +   L E R VH   +R  L  
Sbjct: 195 YADNGNATEAMALFWRM-VQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ + N+L+  Y+K      A  +FN +      +SWN+MI G            LF  M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                +    TL++++P+          + IH + ++     +   + AL+ MY  CG +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  L    + +     WN +I     +G  Q A++ F+ M +   + P+  T ++V++
Sbjct: 374 SIARRLFDS-ARDRHVITWNAMIHGYGSHGFGQAAVELFEEM-KGTGSLPNETTFLSVLA 431

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
           AC +  L  EG+     ++K   GL+  +++   ++ + GR   +  A
Sbjct: 432 ACSHAGLVDEGQKYFA-SMKKDYGLEPGMEHYGTMVDLLGRAGKLDEA 478



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 158/351 (45%), Gaps = 16/351 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDV-VTWNAMITACVENRCVVMGLHF 60
           G  +++  + +L+T Y+     + +  +F E  NK   ++WNAMI    +N C       
Sbjct: 250 GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERL 309

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  E +R DS TL+ ++ A+  ++   Q R +H  SI+  +  D  +    ++MY+K
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSK 369

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ +   F        ++WN ++ G   + + +  +  F EM  +G   +  +  S 
Sbjct: 370 CGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSV 429

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +AA +  G +  G+   A  +K  Y   P +    +++ +  + G ++ A      M  +
Sbjct: 430 LAACSHAGLVDEGQKYFA-SMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488

Query: 241 DVVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD-------IATVVTLISLCADSL 292
             +S + A++    L+   E A +     Q++  + P+       +A +    S+  D  
Sbjct: 489 PGISVYGAMLGACKLHKNVELAEE---SAQIIFELGPEEGVYHVLLANIYANASMWKDVA 545

Query: 293 LLREGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPM 342
            +R      G  +++  G+ ++ + N +  FYS S +   A+ ++  +A +
Sbjct: 546 RVRTAMEKKG--LQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKL 594


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 221/831 (26%), Positives = 386/831 (46%), Gaps = 62/831 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L     L+ +Y+  +   ++  +F E   ++ V+W  +++  V +         
Sbjct: 90  RGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRV 149

Query: 61  FGEMVEE---GIRFDSTTLLIIVSALTQMNCLKQGRVV--HCLSIKAGMIADSSLCNVFV 115
           F  M+ E   G R  S T   ++ A       + G  V  H L  K    +++++CN  +
Sbjct: 150 FRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALI 209

Query: 116 NMYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           +MY  C  G    ++  F G    D ++WN +MS              F++M   G+   
Sbjct: 210 SMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM-QRGDSRI 268

Query: 174 NVSLSSAVAASACLGELSYGKVIHALG------IKLGYEDSPYVSVTNSLISMYSQCGDI 227
            +  +     S              L       +K G     YV   ++L+S +++ G  
Sbjct: 269 QLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVG--SALVSAFARHGLT 326

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           + A+  F  +  K+ V+ N +I G       EEA  +   +    +V+ +  T V L+S 
Sbjct: 327 DEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF--VGTRNTVDVNADTYVVLLSA 384

Query: 288 CADSLL----LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
            A+  +    LR GR VHG+ +R  L    + + N L++ Y+K  ++  A  +F  +   
Sbjct: 385 LAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQ-LMEA 443

Query: 343 NDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            D +SWN++IS L            +  M   C   S   L++ L SC   + L  G+ +
Sbjct: 444 TDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQV 503

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI-VACTQNG 449
           HC  +K G   +T   N L+ MY  CG +   + +   ++ + + S WN ++ V  +   
Sbjct: 504 HCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVS-WNTMMGVMASSQT 562

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
              E +K F +M  +    P+ VT +N+++A   L +   GK +H   +K  +  D  V 
Sbjct: 563 PISEIVKVFNNM-MRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVD 621

Query: 510 NALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALE---LFRHLEF 565
           NALI+ Y +  D+ S   +F +  +  +  +WN MIS +  N     A++   L  H   
Sbjct: 622 NALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQ 681

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
             +  +   IL+AC  +  L  G ++H        + +  + SAL+DMYS C        
Sbjct: 682 IMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASK 741

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  ++  +W+SMIS Y  HG G +AIE+F EM  S   P   + +S+LSACSH+GL
Sbjct: 742 LFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGL 801

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V+ GL+Y+  M+ ++ + P+ EH+ C++D+LGR+GK+ +  E+I+ +PI+P   +W  +L
Sbjct: 802 VERGLEYF-EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVL 860

Query: 731 SACSHHGD---TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            AC    D     +G++ + +L ++EP+N   Y+  SN + A G W+D  +
Sbjct: 861 VACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAK 911



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 187/723 (25%), Positives = 345/723 (47%), Gaps = 64/723 (8%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   IK G+  D  LCN  VN YAK   L ++   F  M   + VSW  ++SG + +  
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 155 PEKCLLYFREM---GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            E+    FR M     +G +  + +  + + A    G    G  +   G+    E +   
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202

Query: 212 SVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +V N+LISMY  C  G    A+R F G   +D+++WNA++  +A  G     F L  +MQ
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262

Query: 270 L------MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
                  +R  E    +++T  SL + S  + +   V  + ++     DL + ++L+  +
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLD--QVLVWVLKSGCSSDLYVGSALVSAF 320

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLYLCSQ-------FSFS 369
           ++     +A+ +F ++   N  V+ N +I GL ++        +++ ++        ++ 
Sbjct: 321 ARHGLTDEAKDIFLSLKQKN-AVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYV 379

Query: 370 TLLAILPSCN-SPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQ 427
            LL+ L   + S E L  G+ +H   L+ G ++  I V N L++MY  CG + +A  + Q
Sbjct: 380 VLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQ 439

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +   +D   WN +I A  QNG+ +EA+  + S+ +Q   SP +  L++ +S+C  L+L 
Sbjct: 440 -LMEATDRISWNTIISALDQNGNCEEAVMHY-SLMRQSCISPSNFALISSLSSCAGLKLL 497

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G+ +H  A+K  + LDT V N L+ MYG C  +     VF S    +  +WN M+   
Sbjct: 498 TAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVM 557

Query: 548 SQNKAEVRAL-ELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           + ++  +  + ++F ++      PN+++ +++L+A + L VL  GKQ+H  V   G  E+
Sbjct: 558 ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED 617

Query: 604 SFISSALLDMY----------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           + + +AL+  Y                S+ +   +W+SMIS Y Y+G   EA++    M 
Sbjct: 618 NVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMI 677

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGR 703
           +SG      +   +L+AC+    ++ G++     L  + +R   E  V +    VDM  +
Sbjct: 678 HSGQIMDCCTFSIILNACASVAALERGME-----LHAFGIRSHLESDVVVESALVDMYSK 732

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE--PENVGYYI 761
            G++  A +   ++  Q     W +M+S  + HG  +   ++ E + +    P++V +  
Sbjct: 733 CGRVDYASKLFNSM-TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVS 791

Query: 762 SLS 764
            LS
Sbjct: 792 VLS 794



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 207/478 (43%), Gaps = 58/478 (12%)

Query: 293 LLREG------RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           LLR G       ++H   I+R L +DL + N L++ Y+K   L+ A  +F+ + P  + V
Sbjct: 70  LLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEM-PERNAV 128

Query: 347 SWNSMISG------------LFKEMLYLC------SQFSFSTLLAILPSCNSPESLEFGK 388
           SW  ++SG            +F+ ML         + F+F TLL        P+ L F  
Sbjct: 129 SWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQD-GGPDRLGFAV 187

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS---DTSCWNIVIVAC 445
            +H    K  +++NT   NAL+ MY +C   V    L QR+   +   D   WN ++   
Sbjct: 188 QVHGLVSKTEYASNTTVCNALISMYGSC--TVGPPILAQRVFDGTPIRDLITWNALMSVY 245

Query: 446 TQNGHFQEAIKTFKSMTQQQNA---SPDSVTLVNVISACGNLELAFEG-KSLHGLALKSL 501
            + G        FK M +  +     P   T  ++I+A      +      +    LKS 
Sbjct: 246 AKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG 305

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
              D  V +AL++ + R      A  +F S    N  T N +I    +      A+++F 
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365

Query: 562 HLE--FEPNEISIVSILSACTQLGV----LRHGKQIHGHVFHLGFQENSF-ISSALLDMY 614
                 + N  + V +LSA  +  +    LR G+ +HGH+   G  +    +S+ L++MY
Sbjct: 366 GTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425

Query: 615 SNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C +                 +W+++ISA   +G   EA+  +  M  S I P+  ++I
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           S LS+C+   L+  G Q + + + ++ +  +T     +V M G  G + + ++   ++
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAV-KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM 542


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 296/596 (49%), Gaps = 58/596 (9%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD   WN++I   A     + A      MQ   +V  +  T   L+  CA    L     
Sbjct: 16  KDTFHWNSLIAKNATQNP-QTALTFFTRMQ-AHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISGL--- 355
           VH Y  R  L  D     +L+D Y K      A  +F+ +   + D+VSW ++IS     
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 356 ---------FKEMLYL-------CSQFSFSTLLAILPSCN---SPESLEFGKSIHCWQLK 396
                    F  M ++       C      +L A++ +C        L  G ++H   +K
Sbjct: 134 GCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAI 455
            GF  +T   N+++HMY  C D+  A+ +   I     D   WN +I   T NG  + A+
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERAL 253

Query: 456 KTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHGLALKS----LMGLDTRVQ 509
           +TF+ M  +  ++  P+ VT++ ++ +C  L        +H          L+  D  V 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL------ 563
            AL+ M+ RC ++  A  +F+     N+  W+ MI+ + Q      AL LFR +      
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
              E +PN +++VS+++AC++LG  R    IH +    G  +++ I+SAL+DM + C   
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         ++  +WSSMI A G HG+G  A+ELF EM   G  P + + IS+LS
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+GLV++G   +N+M ++Y + P  +H+ C+VD+LGR+G L EA+  I N+PI+   
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +WG++L+AC  HG+ K+G+ V + +  L+  +VG+++ L+NMY   GRW D V +
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRM 609



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 46/553 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +KD   WN++I            L FF  M    +  ++ T   ++ A   +  L     
Sbjct: 15  HKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH--CADTVSWNTIMSGCLHN 152
           VH    + G+ AD       V+ Y KCG    +   F  M     D VSW  ++S    N
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 153 NYPEKCLLYFREM----GWSGEQ---ADNVSLSSAVAASA--CLGE-LSYGKVIHALGIK 202
              ++    F  M    GW G +    D VSL + V+A A  C    L  G  +H L +K
Sbjct: 134 GCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEE 260
            G+  S ++   NS++ MYS C D+  A R F G+    +DVVSWN++I GF LNG+ E 
Sbjct: 194 YGFGVSTHLG--NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAER 251

Query: 261 AFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR----LLGYDLL 314
           A     +M  +   +VEP+  TV+ L+  CA+   +     VH Y   R    L+  D++
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           ++ +L+D +++  +L+ A  +F+ +   N +V W++MI+G            LF++ML  
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKN-VVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 363 CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +           TL++++ +C+   +      IH + +  G   +    +AL+ M   C
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 417 GDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           GD+     +   +  ++ T   W+ +I A   +G  + A++ F  M +     P+ +T +
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM-RTGGYEPNEITYI 489

Query: 476 NVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCY 533
           +V+SAC +  L  +GKS  + +     M    +    L+ + GR   +  A + +     
Sbjct: 490 SVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPI 549

Query: 534 NCNLCTWNCMISA 546
             +L  W  +++A
Sbjct: 550 KADLALWGSLLAA 562



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 237/530 (44%), Gaps = 53/530 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK--DVVTWNAMITACVENRCVVMGLH 59
           G  A   ++ +L+ AY    +   +  +F E      DVV+W A+I+A   N CV     
Sbjct: 82  GLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFK 141

Query: 60  FFGEMV-------EEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSS 109
            FG M         E    D  +L  +VSA       NCL++G  VH L +K G    + 
Sbjct: 142 AFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTH 201

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREM-- 165
           L N  V+MY+ C D+  +   F+G+     D VSWN+++SG   N   E+ L  F +M  
Sbjct: 202 LGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVS 261

Query: 166 -GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY--------VSVTNS 216
            G S  + + V++ + + + A LG +     +H       Y  S +        V V  +
Sbjct: 262 EGTSAVEPNRVTVIALLKSCAELGCVETSSWVHE------YISSRHSSLLVAKDVVVLTA 315

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--- 273
           L+ M+++CG++  A   F G+  K+VV W+A+I G+      EEA  L  +M LM     
Sbjct: 316 LLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM-LMEGNMV 374

Query: 274 ---VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              V+P+  T+V++I+ C+     R    +H YA+   L  D  + ++L+D  +K   + 
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434

Query: 331 KAELLFNAI-APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
               +F+ +      +VSW+SMI              LF EM     + +  T +++L +
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSA 494

Query: 378 CNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           C+    +E GKS  +  +   G S        L+ +    G L  A +++  +   +D +
Sbjct: 495 CSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLA 554

Query: 437 CWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            W  ++ AC  +G+ +   I   K ++   N+    V L N+    G  +
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWD 604



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/350 (19%), Positives = 158/350 (45%), Gaps = 17/350 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-- 68
           T+LL  ++       +  +F     K+VV W+AMI    +  C    L  F +M+ EG  
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 69  ----IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
               ++ ++ TL+ +++A +++   +   ++H  ++  G+  D+ + +  ++M AKCGD+
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 125 NSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
                 FS M       VSW++++     +   ++ L  F EM   G + + ++  S ++
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-D 241
           A +  G +  GK      ++  Y  SP       L+ +  + G ++ A      M  K D
Sbjct: 494 ACSHAGLVEQGKSCFN-SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS----LLLREG 297
           +  W +++    L+G  +     + E +++      +   V L ++  D+     ++R  
Sbjct: 553 LALWGSLLAACHLHGNCK--LGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 298 RSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
             +    +R++ G   + + N +  F ++  S  ++E+++  +  +++ V
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERV 660


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 180/571 (31%), Positives = 291/571 (50%), Gaps = 46/571 (8%)

Query: 246 NAIIDGFALNGKFEEAFDLL-HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N +I  F+       AF LL H +       PD  T  +LI     +        +H  A
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93

Query: 305 IR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-------- 355
           +R  L+   +    SL+  Y +   +S+A  +F+ ++   D+ +WN+M+SGL        
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSE-RDVPAWNAMLSGLCRNARAAE 152

Query: 356 ----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
               F  M+         T+ ++LP C           +H + +K G        NAL+ 
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212

Query: 412 MYINCGDLVAAFSLLQRISHN---SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           +Y   G L  A    Q + H     D   WN +I  C Q G    A+K F+ M +    S
Sbjct: 213 VYGKLGMLEEA----QCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGM-RGSGVS 267

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSAST 527
           PD +TLV++ SA          KSLH   ++    +D  +  NA++ MY +  +I++A  
Sbjct: 268 PDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQR 327

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLG 583
           +F+S    +  +WN +I+ + QN     A+E + H++     +  + + VS+L A + LG
Sbjct: 328 MFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLG 387

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
            L+ G ++H     +G   + ++ + L+D+Y+ C               +S   W+++IS
Sbjct: 388 ALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
             G HG G EA+ LF  M   GI+P   + +SLL+ACSH+GLVD+G  +++ M   YD+ 
Sbjct: 448 GLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIV 507

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  +H+ C+ DMLGR+G+L EA+ FI+N+PI+P   VWGA+L AC  HG+ +MGK  ++ 
Sbjct: 508 PIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQN 567

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           LF+L+PENVGYY+ +SNMY  +G+W    E+
Sbjct: 568 LFELDPENVGYYVLMSNMYAKVGKWDGVDEV 598



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 216/457 (47%), Gaps = 15/457 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           TS SL+ AY        +  +F E   +DV  WNAM++    N      +  FG MV EG
Sbjct: 105 TSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEG 164

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D+ T+  ++     +       V+H  ++K G+  +  +CN  +++Y K G L  ++
Sbjct: 165 VAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQ 224

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           C F GM C D V+WN+I+SGC         L  F+ M  SG   D ++L S  +A A  G
Sbjct: 225 CVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGG 284

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +    K +H   ++ G+ D   +   N+++ MY++  +IEAA+R F  M  +D VSWN +
Sbjct: 285 DGRSAKSLHCYVMRRGW-DVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTL 343

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG   EA +    MQ    ++    T V+++   +    L++G  +H  +I+  
Sbjct: 344 ITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIG 403

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+ +   L+D Y+K   L++A LLF  + P      WN++ISG            LF
Sbjct: 404 LNVDVYVGTCLIDLYAKCGKLAEAMLLFEKM-PRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
             M     +    T +++L +C+    ++ G+S     Q+             +  M   
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            G L  AF+ +Q +    D++ W  ++ AC  +G+ +
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVE 559



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/590 (25%), Positives = 265/590 (44%), Gaps = 62/590 (10%)

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
           C   FR  G++       + S+A AA            +HA  ++LG    P V  + SL
Sbjct: 62  CAYPFRPDGFTFPSLIRAAPSNASAAQ-----------LHACALRLGLV-RPSVFTSGSL 109

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           +  Y + G I  A + F  M+ +DV +WNA++ G   N +  EA  L   M +   V  D
Sbjct: 110 VHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRM-VGEGVAGD 168

Query: 278 IATVVTLISLC---ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             TV +++ +C    D +L      +H YA++  L  +L + N+L+D Y K   L +A+ 
Sbjct: 169 TVTVSSVLPMCVLLGDQVL---ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQC 225

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ +    DLV+WNS+ISG            +F+ M          TL+++  +     
Sbjct: 226 VFHGME-CRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGG 284

Query: 383 SLEFGKSIHCWQLKLGFS-NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
                KS+HC+ ++ G+  ++ I  NA++ MY    ++ AA  +   +    D+  WN +
Sbjct: 285 DGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMP-VQDSVSWNTL 343

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    QNG   EA++ +  M + +       T V+V+ A  +L    +G  +H L++K  
Sbjct: 344 ITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIG 403

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           + +D  V   LI +Y +C  +  A  +FE     +   WN +IS    +     AL LF 
Sbjct: 404 LNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFS 463

Query: 562 HLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            ++ E   P+ ++ VS+L+AC+  G++  G+                +     D+    K
Sbjct: 464 RMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD------------VMQVTYDIVPIAK 511

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
             A  + M+      G+  +  E F+ + N  I+P  +   +LL AC   G V+ G    
Sbjct: 512 HYACMADML------GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVAS 565

Query: 679 NNMLEEYDVRPE-TEHHVCIVDMLGRSGK---LQEAYEFIKNLPIQPKPG 724
            N+ E   + PE   ++V + +M  + GK   + E    ++   +Q  PG
Sbjct: 566 QNLFE---LDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPG 612


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 182/617 (29%), Positives = 300/617 (48%), Gaps = 81/617 (13%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WN +I      G  E+   L   MQ +    PD  T   ++  C +    R G SVH
Sbjct: 110 VFWWNQLIRRSVHLGFLEDVLQLYRRMQRL-GWRPDHYTFPFVLKACGEIPSFRCGASVH 168

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP--MNDLVSWNSMISG----- 354
                    +++ + N L+  Y +  +   A  +F+ +    + DLVSWNS+++      
Sbjct: 169 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGG 228

Query: 355 -------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                  +F+ M   L  +    +L+ +LP+C S  +   GK +H + L+ G   +    
Sbjct: 229 DSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVG 288

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ- 465
           NA++ MY  CG +  A  + +R+    D   WN ++   +Q G F +A+  F+ + +++ 
Sbjct: 289 NAVVDMYAKCGMMEEANKVFERMK-VKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKI 347

Query: 466 ---------------------------------NASPDSVTLVNVISACGNLELAFEGKS 492
                                             + P+ VTLV+++S C +      GK 
Sbjct: 348 ELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKE 407

Query: 493 LHGLALKSLMGLDTR-------VQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCM 543
            H  A+K ++ LD         V NALI MY +C+  K+A  +F+     + ++ TW  +
Sbjct: 408 THCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVL 467

Query: 544 ISAFSQNKAEVRALELFRHLE-----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
           I   +Q+     ALELF  +        PN  +I   L AC +LG LR G+QIH +V   
Sbjct: 468 IGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRN 527

Query: 599 GFQENS-FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            F+    F+++ L+DMYS                 ++  +W+S+++ YG HG+G EA+++
Sbjct: 528 RFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQI 587

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F+EM    + P   + + +L ACSHSG+VD+G+ Y+N M +++ V P  EH+ C+VD+L 
Sbjct: 588 FYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLS 647

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L EA E I+ +P++P P VW A+LSAC  + + ++G+  A  L +LE  N G Y  
Sbjct: 648 RAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTL 707

Query: 763 LSNMYVALGRWKDAVEI 779
           LSN+Y     WKD   I
Sbjct: 708 LSNIYANARCWKDVARI 724



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 170/641 (26%), Positives = 280/641 (43%), Gaps = 103/641 (16%)

Query: 4   LAHLPTST-SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L H PT   S+   +++ +   S L   + + +  V  WN +I   V    +   L  + 
Sbjct: 76  LPHDPTHIISMYLTFNSPAKALSVLRRLHPSSHT-VFWWNQLIRRSVHLGFLEDVLQLYR 134

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   G R D  T   ++ A  ++   + G  VH +   +G   +  + N  V+MY +CG
Sbjct: 135 RMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 194

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLS 178
              ++   F  M      D VSWN+I++  +      + +  F  M    G + D VSL 
Sbjct: 195 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 254

Query: 179 SAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           + + A A +G  S GK +H   ++ G +ED   V V N+++ MY++CG +E A + F  M
Sbjct: 255 NVLPACASVGAWSRGKQVHGYALRSGLFED---VFVGNAVVDMYAKCGMMEEANKVFERM 311

Query: 238 TCKDVVSWNAIIDGFALNGKFE-----------------------------------EAF 262
             KDVVSWNA++ G++  G+F+                                   EA 
Sbjct: 312 KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEAL 371

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-------GYDLLM 315
           D+  +M L  S EP++ T+V+L+S CA +  L  G+  H +AI+ +L       G DL++
Sbjct: 372 DVFRQMLLCGS-EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMV 430

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------------LFKEMLYL 362
           +N+L+D YSK  S   A  +F+ I P +  +V+W  +I G            LF +ML  
Sbjct: 431 INALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQ- 489

Query: 363 CSQFSFSTLLAI---LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGD 418
              F       I   L +C    +L FG+ IH + L+  F +  + V N L+ MY   GD
Sbjct: 490 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGD 549

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + AA  +   + H  +   W  ++     +G  +EA++ F  M Q+    PD VT V V+
Sbjct: 550 VDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEM-QKVXLVPDGVTFVVVL 607

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC +  +  +G +                 N +   +G     +               
Sbjct: 608 YACSHSGMVDQGINYF---------------NGMNKDFGVVPGAEH-------------- 638

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
            + CM+   S+      A+EL R +  +P     V++LSAC
Sbjct: 639 -YACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 678



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 230/535 (42%), Gaps = 100/535 (18%)

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSW-NSMIS------------GLFKEMLYLCSQ 365
           ++  Y   NS +KA  +   + P +  V W N +I              L++ M  L  +
Sbjct: 83  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               T   +L +C    S   G S+H      GF  N    N L+ MY  CG    A  +
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202

Query: 426 LQRISHNS--DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
              +      D   WN ++ A  Q G    A+K F+ MT+     PD+V+LVNV+ AC +
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           +     GK +HG AL+S +  D  V NA++ MY +C  ++ A+ VFE     ++ +WN M
Sbjct: 263 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 322

Query: 544 ISAFSQ----------------NKAEV-------------------RALELFRHLEF--- 565
           ++ +SQ                 K E+                    AL++FR +     
Sbjct: 323 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGS 382

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFH--LGFQENS-----FISSALLDMYSNCK 618
           EPN +++VS+LS C   G L HGK+ H H     L   EN       + +AL+DMYS CK
Sbjct: 383 EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 442

Query: 619 SNAA-----------------WSSMISAYGYHGKGWEAIELFHEMCNSG--IRPTKSSVI 659
           S  A                 W+ +I     HG+  EA+ELF +M      + P   ++ 
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDMLGRSGKLQEAYEFI 714
             L AC+  G +  G Q     +  Y +R   E  +     C++DM  +SG +  A    
Sbjct: 503 CALMACARLGALRFGRQ-----IHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 557

Query: 715 KNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLE-----PENVGYYISL 763
            N+    + GV W ++++    HG    G++  ++ ++++     P+ V + + L
Sbjct: 558 DNM--HQRNGVSWTSLMTGYGMHG---RGEEALQIFYEMQKVXLVPDGVTFVVVL 607



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 239/540 (44%), Gaps = 62/540 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVENRCVVMGL 58
           GF  ++     L++ Y     +E++  +F E   +   D+V+WN+++ A ++    +  +
Sbjct: 175 GFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAM 234

Query: 59  HFFGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             F  M E+ GIR D+ +L+ ++ A   +    +G+ VH  ++++G+  D  + N  V+M
Sbjct: 235 KMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDM 294

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSG----------------------------- 148
           YAKCG +  +   F  M   D VSWN +++G                             
Sbjct: 295 YAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTW 354

Query: 149 -CLHNNYPEKCLLY-----FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
             +   Y ++ L +     FR+M   G + + V+L S ++  A  G L +GK  H   IK
Sbjct: 355 SAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIK 414

Query: 203 LGY---EDSP--YVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALN 255
                 E+ P   + V N+LI MYS+C   +AA   F  +  KD  VV+W  +I G A +
Sbjct: 415 WILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH 474

Query: 256 GKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDL 313
           G+  EA +L  +M Q    V P+  T+   +  CA    LR GR +H Y +R R     L
Sbjct: 475 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 534

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + N L+D YSKS  +  A ++F+ +   N  VSW S+++G            +F EM  
Sbjct: 535 FVANCLIDMYSKSGDVDAARVVFDNMHQRNG-VSWTSLMTGYGMHGRGEEALQIFYEMQK 593

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           +       T + +L +C+    ++ G    +      G          ++ +    G L 
Sbjct: 594 VXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLD 653

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  L++ +      + W  ++ AC    + +        + + ++ +  S TL++ I A
Sbjct: 654 EAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYA 713


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 191/659 (28%), Positives = 328/659 (49%), Gaps = 44/659 (6%)

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL--SYGKVIHALGIKLGYEDSPYVSV 213
           ++ L  F  +  SG   D+ ++S  +  S C G    + G+ +H   +K G     ++SV
Sbjct: 84  QEALHLFVSLYRSGLSPDSYTMSCVL--SVCAGSFNGTVGEQVHCQCVKCGLVH--HLSV 139

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            NSL+ MY++ G++    R F  M  +DVVSWN+++ G++ N   ++ ++L   MQ+   
Sbjct: 140 GNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQV-EG 198

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
             PD  TV T+I+  A+   +  G  +H   ++     + L+ NSL+   SKS  L  A 
Sbjct: 199 YRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDAR 258

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
           ++F+ +    D VSWNSMI+G             F  M    ++ + +T  +++ SC S 
Sbjct: 259 VVFDNMEN-KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASL 317

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           + L   + +HC  LK G S N   + ALM     C ++  AFSL   +        W  +
Sbjct: 318 KELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAM 377

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I    QNG   +A+  F S+ +++   P+  T   +++    ++ A     +H   +K+ 
Sbjct: 378 ISGYLQNGDTDQAVNLF-SLMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVIKTN 432

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
               + V  AL+  + +  +I  A  VFE     ++  W+ M++ ++Q      A ++F 
Sbjct: 433 YEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFH 492

Query: 562 HLEFE---PNEISIVSILSACT-QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS-- 615
            L  E   PNE +  SI++ACT     +  GKQ H +   L       +SS+L+ +Y+  
Sbjct: 493 QLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKR 552

Query: 616 -NCKSN------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
            N +S              +W+SMIS Y  HG+  +A+E+F EM    +     + I ++
Sbjct: 553 GNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVI 612

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC+H+GLV +G  Y+N M+ ++ + P  EH+ C++D+  R+G L +A + I  +P  P 
Sbjct: 613 SACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPA 672

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             VW  +L+A   H + ++GK  AE +  LEP++   Y+ LSN+Y A G W + V + K
Sbjct: 673 ATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRK 731



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/580 (28%), Positives = 280/580 (48%), Gaps = 31/580 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF +T  +D+   N ++            LH F  +   G+  DS T+  ++S       
Sbjct: 58  LFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFN 117

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
              G  VHC  +K G++   S+ N  V+MY K G++      F  M   D VSWN++++G
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTG 177

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N + ++    F  M   G + D  ++S+ +AA A  G ++ G  IHAL +KLG+E  
Sbjct: 178 YSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETE 237

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
               V NSLISM S+ G +  A   F  M  KD VSWN++I G  +NG+  EAF+  + M
Sbjct: 238 RL--VCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNM 295

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           QL    +P  AT  ++I  CA    L   R +H   ++  L  +  ++ +LM   +K   
Sbjct: 296 QLA-GAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG---------------LFKEMLYLCSQFSFSTLLA 373
           +  A  LF+ +  +  +VSW +MISG               L +      + F++ST+L 
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT 414

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +       +   F   IH   +K  +  ++    AL+  ++  G++  A  + + I    
Sbjct: 415 V-------QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE-TK 466

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKS 492
           D   W+ ++    Q G  +EA K F  +T ++   P+  T  ++I+AC     + E GK 
Sbjct: 467 DVIAWSAMLAGYAQAGETEEAAKIFHQLT-REGIKPNEFTFCSIINACTAPTASVEQGKQ 525

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            H  A+K  +     V ++L+T+Y +  +I+SA  +F+     +L +WN MIS ++Q+  
Sbjct: 526 FHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQ 585

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
             +ALE+F  ++    E + I+ + ++SAC   G++  G+
Sbjct: 586 AKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQ 625



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 250/505 (49%), Gaps = 24/505 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + HL    SL+  Y+          +F E  ++DVV+WN+++T    NR        F
Sbjct: 132 GLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELF 191

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG R D  T+  +++AL     +  G  +H L +K G   +  +CN  ++M +K 
Sbjct: 192 CLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKS 251

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D+VSWN++++G + N    +    F  M  +G +  + + +S +
Sbjct: 252 GMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCK 240
            + A L EL   +V+H   +K G   S   +V  +L+   ++C +I+ A   F  M   +
Sbjct: 312 KSCASLKELGLVRVLHCKTLKSGL--STNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQ 369

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VVSW A+I G+  NG  ++A +L   M+    V+P+  T  T++++   ++ + E   +
Sbjct: 370 SVVSWTAMISGYLQNGDTDQAVNLFSLMR-REGVKPNHFTYSTILTV-QHAVFISE---I 424

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+        +  +L+D + K  ++S A  +F  I    D+++W++M++G      
Sbjct: 425 HAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI-ETKDVIAWSAMLAGYAQAGE 483

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSNNTIGVN 407
                 +F ++     + +  T  +I+ +C +P  S+E GK  H + +KL  +N     +
Sbjct: 484 TEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSS 543

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ +Y   G++ +A  + +R     D   WN +I    Q+G  ++A++ F+ M Q++N 
Sbjct: 544 SLVTLYAKRGNIESAHEIFKR-QKERDLVSWNSMISGYAQHGQAKKALEVFEEM-QKRNL 601

Query: 468 SPDSVTLVNVISACGNLELAFEGKS 492
             D++T + VISAC +  L  +G++
Sbjct: 602 EVDAITFIGVISACAHAGLVGKGQN 626


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 154/447 (34%), Positives = 257/447 (57%), Gaps = 22/447 (4%)

Query: 355 LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           LF EML+  S       T    L SC+   +L+ G+ +  + +K G   +   +++L+HM
Sbjct: 105 LFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHM 164

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y +CGD VAA  L+   +  S    WN ++ A  +NG + E ++ FK M +   A  D V
Sbjct: 165 YASCGD-VAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAF-DEV 222

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TLV+V++ACG +  A  GK + G   +  +  + ++  AL+ MY +C +I  A  +F+  
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM 282

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGK 589
            + ++  W+ MIS ++Q      AL LF  ++    EPN++++VS+LSAC  LG L  GK
Sbjct: 283 QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            +H +V        + + +AL+D Y+ C               K++  W+++I     +G
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 402

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           +G EA+ELF  M  +GI PT  + I +L ACSHS LV+EG +++++M  +Y ++P  EH+
Sbjct: 403 RGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHY 462

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGR+G + EAY+FI+ +PI+P   +W A+LS+C+ H +  +G++  + +  L P
Sbjct: 463 GCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNP 522

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
            + G Y+ LSN+Y + G+WKDA  + K
Sbjct: 523 SHSGDYVLLSNIYASAGQWKDAAMVRK 549



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 206/445 (46%), Gaps = 24/445 (5%)

Query: 57  GLHFFGEMVE--EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
            LH F EM+        D  T    + + ++M  L  GR V   ++K G++AD  + +  
Sbjct: 102 ALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSL 161

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MYA CGD+ ++   F     +  V WN I++  L N    + +  F+ M   G   D 
Sbjct: 162 IHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDE 221

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           V+L S V A   +G+   GK +     + G   +P   +  +L+ MY++CG+I  A R F
Sbjct: 222 VTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP--KLVTALMDMYAKCGEIGKARRLF 279

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
            GM  +DVV+W+A+I G+    +  EA  L  EMQL R VEP+  T+V+++S CA    L
Sbjct: 280 DGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLAR-VEPNDVTMVSVLSACAVLGAL 338

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G+ VH Y  R+ L    ++  +L+DFY+K   +  A   F ++ P+ +  +W ++I G
Sbjct: 339 ETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKG 397

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSN 401
                       LF  M     + +  T + +L +C+    +E G+          G   
Sbjct: 398 MATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKP 457

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN---GHFQEAIKTF 458
                  ++ +    G +  A+  ++ +    +   W  ++ +C  +   G  +EA+K  
Sbjct: 458 RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQI 517

Query: 459 KSMTQQQNASPDSVTLVNVISACGN 483
            S+      S D V L N+ ++ G 
Sbjct: 518 ISLNPSH--SGDYVLLSNIYASAGQ 540



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 177/359 (49%), Gaps = 14/359 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG +A     +SL+  Y++     ++  +F       VV WNA++ A ++N   +  +  
Sbjct: 149 RGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEM 208

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+E G+ FD  TL+ +V+A  ++   K G+ V     + G+  +  L    ++MYAK
Sbjct: 209 FKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAK 268

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++  +   F GM   D V+W+ ++SG    +   + L  F EM  +  + ++V++ S 
Sbjct: 269 CGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSV 328

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVT----NSLISMYSQCGDIEAAERAFWG 236
           ++A A LG L  GK +H+      Y     +S+T     +L+  Y++CG I+ A  AF  
Sbjct: 329 LSACAVLGALETGKWVHS------YVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFES 382

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  K+  +W A+I G A NG+  EA +L   M+    +EP   T + ++  C+ S L+ E
Sbjct: 383 MPVKNSWTWTALIKGMATNGRGREALELFSSMREA-GIEPTDVTFIGVLMACSHSCLVEE 441

Query: 297 GRSVHGYAIRRLLGYDLLM--MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           GR  H  ++ R  G    +     ++D   ++  + +A      +    + V W +++S
Sbjct: 442 GRR-HFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLS 499



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 174/349 (49%), Gaps = 29/349 (8%)

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-DSVTLVNVISACGNLELAFEGKSL 493
           T C+N+++ A    GH ++A+  F  M    +A P D  T    + +C  +     G+ +
Sbjct: 83  TPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGV 142

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
              A+K  +  D  V ++LI MY  C D+ +A  VF++     +  WN +++A+ +N   
Sbjct: 143 QAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDW 202

Query: 554 VRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
           +  +E+F+    +    +E+++VS+++AC ++G  + GK + GHV   G   N  + +AL
Sbjct: 203 MEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTAL 262

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY+ C               +   AWS+MIS Y    +  EA+ LF EM  + + P  
Sbjct: 263 MDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPND 322

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            +++S+LSAC+  G ++ G ++ ++ +    +   T     +VD   + G + +A E  +
Sbjct: 323 VTMVSVLSACAVLGALETG-KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFE 381

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-----EPENVGY 759
           ++P++     W A++   + +G    G++  EL   +     EP +V +
Sbjct: 382 SMPVK-NSWTWTALIKGMATNG---RGREALELFSSMREAGIEPTDVTF 426


>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 611

 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 192/618 (31%), Positives = 304/618 (49%), Gaps = 57/618 (9%)

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  L  GK IH      G+   P++     LI MY+ C  + +A+R F  M   +V +W 
Sbjct: 8   LKSLHAGKQIHQQITVSGWGKDPFM--LTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWT 65

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           AI   +  +G +++       M+    V PD      ++  C   L    G  +H   I 
Sbjct: 66  AIFGFYLRHGMYDKCVQNYGFMKY-SDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIV 124

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
                +L + NSL+D Y K  +   A L+F  +    DL SWNSMISG     L      
Sbjct: 125 CGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEE-RDLFSWNSMISGYVSNGL------ 177

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
                LA+             + ++C +L  GF  + +  N LM  Y   G    A+ +L
Sbjct: 178 ---ADLAV-------------ELLNCMRLD-GFEPDVVTWNTLMDAYCQMGRFDEAWEVL 220

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           ++I   +  S W  +I + ++ G    +++ F+ M  ++  SPD   L +V+ +C ++  
Sbjct: 221 KQIEQPNIIS-WTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGA 279

Query: 487 AFEGKSLHGLALKSLMGLDTRVQN----ALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
              GK +HG   K  M  +T   +    AL+TMY +C  I+ A  VFE     ++ TWN 
Sbjct: 280 LRSGKEIHGYGTK--METNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNA 337

Query: 543 MISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH-L 598
           MI  F +     +A+E FR    ++ + ++ +I +IL  C     L++G  IH +V   +
Sbjct: 338 MILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYGNPIHAYVRKSI 393

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
                  + +A++ MY  C               K   +W++MI  +G HG G  A++L 
Sbjct: 394 TLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLL 453

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            EM  SGI P  ++  S+LSACSHSGLVDEG + + +M E+Y + P  EH+ CIVDML R
Sbjct: 454 KEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLAR 513

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G+  +A  FI  +P++P   +WGA+L+AC  + +   G+  AE L ++EP+  G+Y++L
Sbjct: 514 AGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTL 573

Query: 764 SNMYVALGRWKDAVEIGK 781
           SN+Y   GRW DA  + K
Sbjct: 574 SNIYARAGRWDDAGRVRK 591



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 164/658 (24%), Positives = 283/658 (43%), Gaps = 94/658 (14%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           + +  L  G+ +H     +G   D  +    + MYA C  L S++  F  M   +  +W 
Sbjct: 6   SNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPNVYAWT 65

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            I    L +   +KC+  +  M +S    DN      + A   L     G  IH   I  
Sbjct: 66  AIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVC 125

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G E +  + V NSLI MY +CG+  +A   F  M  +D+ SWN++I G+  NG  + A +
Sbjct: 126 GCESN--LQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVE 183

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           LL+ M+L    EPD+ T                                    N+LMD Y
Sbjct: 184 LLNCMRL-DGFEPDVVT-----------------------------------WNTLMDAY 207

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL-CSQFSFST 370
            +     +A  +   I   N ++SW ++IS             +F++M+           
Sbjct: 208 CQMGRFDEAWEVLKQIEQPN-IISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDC 266

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN----ALMHMYINCGDLVAAFSLL 426
           L ++L SC    +L  GK IH +  K+    NT+  +    AL+ MY  CG +  A ++ 
Sbjct: 267 LCSVLVSCRHIGALRSGKEIHGYGTKM--ETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           + +   SD   WN +I+   +    ++AI+ F+ M Q+ +   D  T+  ++  C   +L
Sbjct: 325 E-LMDKSDIVTWNAMILGFVELDLGKQAIECFREM-QRMDIKNDQTTISTILPVC---DL 379

Query: 487 AFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            + G  +H    KS+ +     V NA+I MY +C  ++SA T+F S  N ++ +WN MI 
Sbjct: 380 QY-GNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIG 438

Query: 546 AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            F  +     AL+L + +      PN  +  S+LSAC+  G++  G ++           
Sbjct: 439 GFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLF---------- 488

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                 ++ + YS       +S ++      G+  +A+   H+M    + P KS   +LL
Sbjct: 489 -----RSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKM---PLEPDKSIWGALL 540

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETE---HHVCIVDMLGRSGKLQEAYEFIKNL 717
           +AC     +D     +  +  E  +R E +   H+V + ++  R+G+  +A    K +
Sbjct: 541 AACRAYQNLD-----FGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEI 593



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 137/595 (23%), Positives = 236/595 (39%), Gaps = 116/595 (19%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNA---------MITACVENRCVVMGLHFF 61
           T L+  Y++  +  S+  LF +    +V  W A         M   CV+N         +
Sbjct: 34  TKLIQMYADCDHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQN---------Y 84

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M    +  D+     ++ A TQ+   + G  +H   I  G  ++  +CN  ++MY KC
Sbjct: 85  GFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKC 144

Query: 122 GDLNSSECTFSGM----------------------------HC-------ADTVSWNTIM 146
           G+  S+   F  M                            +C        D V+WNT+M
Sbjct: 145 GNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLM 204

Query: 147 SG-CLHNNYPE-----KCLLYFREMGWS---------GEQ-----------------ADN 174
              C    + E     K +     + W+         GE                   D 
Sbjct: 205 DAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDL 264

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
             L S + +   +G L  GK IH  G K+      Y S   +L++MY++CG I+ A   F
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M   D+V+WNA+I GF      ++A +   EMQ M  ++ D  T+ T++ +C     L
Sbjct: 325 ELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRM-DIKNDQTTISTILPVCD----L 379

Query: 295 REGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           + G  +H Y  + + L   + + N+++  Y K   +  A  +F ++ P  D+VSWN+MI 
Sbjct: 380 QYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSM-PNKDVVSWNTMIG 438

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFS 400
           G            L KEM+      + +T  ++L +C+    ++ G +           +
Sbjct: 439 GFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSIT 498

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTF 458
                 + ++ M    G    A + + ++    D S W  ++ AC   QN  F   +   
Sbjct: 499 PRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGR-LAAE 557

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELA------FEGKSLHGLALKSLMGLDTR 507
           + +  +   +   VTL N+ +  G  + A       EGK L   + +SL  ++TR
Sbjct: 558 QLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSL--IETR 610



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 174/393 (44%), Gaps = 39/393 (9%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L  C++ +SL  GK IH      G+  +   +  L+ MY +C  L +A  L  ++    
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQ-P 59

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS- 492
           +   W  +     ++G + + ++ +  M +  +  PD+     V+ AC  L L FEG   
Sbjct: 60  NVYAWTAIFGFYLRHGMYDKCVQNYGFM-KYSDVLPDNYVFPKVLRACTQL-LWFEGGIW 117

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H   +      + +V N+LI MY +C + +SA  VFE     +L +WN MIS +  N  
Sbjct: 118 IHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGL 177

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              A+EL   +    FEP+ ++  +++ A  Q+G      ++   +     ++ + IS  
Sbjct: 178 ADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQI-----EQPNIIS-- 230

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHS 668
                        W+++IS+Y   G+   ++ +F +M     + P    + S+L +C H 
Sbjct: 231 -------------WTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHI 277

Query: 669 GLVDEG--LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV- 725
           G +  G  +  Y   +E   V   +     ++ M  + G++Q+A   I    +  K  + 
Sbjct: 278 GALRSGKEIHGYGTKMETNTVF-YSSAGAALLTMYAKCGRIQDA---INVFELMDKSDIV 333

Query: 726 -WGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            W AM+       +  +GKQ  E   +++  ++
Sbjct: 334 TWNAMILG---FVELDLGKQAIECFREMQRMDI 363



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/328 (23%), Positives = 135/328 (41%), Gaps = 30/328 (9%)

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++  C NL+    GK +H     S  G D  +   LI MY  C  + SA  +F+     N
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           +  W  +   + ++    + ++ +  +++    P+      +L ACTQL     G  IH 
Sbjct: 61  VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            V   G + N  + ++L+DMY  C               +   +W+SMIS Y  +G    
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+EL + M   G  P   +  +L+ A    G  DE  +    + +     P       ++
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQ-----PNIISWTTLI 235

Query: 699 DMLGRSGKLQEAYEFIKNLPIQ----PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
               + G+   +    +++ I+    P      ++L +C H G  + GK++     K+E 
Sbjct: 236 SSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMET 295

Query: 755 ENVGYY---ISLSNMYVALGRWKDAVEI 779
             V Y     +L  MY   GR +DA+ +
Sbjct: 296 NTVFYSSAGAALLTMYAKCGRIQDAINV 323


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 264/494 (53%), Gaps = 39/494 (7%)

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA----- 373
           ++  Y+    L +A L+F  +     +++W S+I     + L+  +  SF  + A     
Sbjct: 45  VISIYTNLKLLHEALLVFKTLES-PPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCP 103

Query: 374 -------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY---INCGDLVAAF 423
                  +L SC     L FG+S+H + ++LG   +    NALM+MY   +    +   F
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            L+ R     D   +N VI    Q+G +++A++  + M    +  PD+ TL +V+     
Sbjct: 164 ELMPR----KDVVSYNTVIAGYAQSGMYEDALRMVREMGTS-DLKPDAFTLSSVLPIFSE 218

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
                +GK +HG  ++  +  D  + ++L+ MY +   I+ +  VF   Y  +  +WN +
Sbjct: 219 YVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSL 278

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           ++ + QN     AL LFR +   +  P  ++  S++ AC  L  L  GKQ+HG+V   GF
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
             N FI+SAL+DMYS C                   +W+++I  +  HG G EA+ LF E
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G++P + + +++L+ACSH GLVDE   Y+N+M + Y +  E EH+  + D+LGR+G
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           KL+EAY+FI  + ++P   VW  +LS+CS H + ++ ++VAE +F ++ EN+G Y+ + N
Sbjct: 459 KLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCN 518

Query: 766 MYVALGRWKDAVEI 779
           MY + GRWK+  ++
Sbjct: 519 MYASNGRWKEMAKL 532



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 221/476 (46%), Gaps = 36/476 (7%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L+H   S  +++ Y+N+     +L +F    +  V+ W ++I    +       L  F E
Sbjct: 37  LSHTSASI-VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVE 95

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   G   D      ++ + T M  L+ G  VH   ++ GM  D    N  +NMY+K   
Sbjct: 96  MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLG 155

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           ++S    F  M   D VS+NT+++G   +   E  L   REMG S  + D  +LSS +  
Sbjct: 156 IDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPI 215

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            +   ++  GK IH   I+ G +   Y+   +SL+ MY++   IE +ER F  +  +D +
Sbjct: 216 FSEYVDVLKGKEIHGYVIRKGIDSDVYIG--SSLVDMYAKSARIEDSERVFSHLYRRDSI 273

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWN+++ G+  NG++ EA  L  +M +   V P      ++I  CA    L  G+ +HGY
Sbjct: 274 SWNSLVAGYVQNGRYNEALRLFRQM-VSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGY 332

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            +R   G ++ + ++L+D YSK  ++  A  +F+ +  ++D VSW ++I G         
Sbjct: 333 VLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMN-LHDEVSWTAIIMGHALHGHGHE 391

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN---TIGVNA 408
              LF+EM     + +    +A+L +C+       G     W    G+ N+     G+N 
Sbjct: 392 AVSLFEEMKRQGVKPNQVAFVAVLTACS-----HVGLVDEAW----GYFNSMTKVYGLNQ 442

Query: 409 LMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            +  Y    DL+        A+  + ++      S W+ ++ +C+ + + + A K 
Sbjct: 443 ELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKV 498



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 36/289 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + +   +SL+  Y+  +  E S  +F     +D ++WN+++   V+N      L  
Sbjct: 235 KGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRL 294

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +MV   +R  +     ++ A   +  L  G+ +H   ++ G   +  + +  V+MY+K
Sbjct: 295 FRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSK 354

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ ++   F  M+  D VSW  I+ G   + +  + +  F EM   G + + V+  + 
Sbjct: 355 CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + +G +             GY         NS+  +Y    ++E            
Sbjct: 415 LTACSHVGLVDEA---------WGY--------FNSMTKVYGLNQELE------------ 445

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
               + A+ D     GK EEA+D + +M+    VEP  +   TL+S C+
Sbjct: 446 ---HYAAVADLLGRAGKLEEAYDFISKMR----VEPTGSVWSTLLSSCS 487


>gi|302772569|ref|XP_002969702.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
 gi|300162213|gb|EFJ28826.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
          Length = 689

 Score =  291 bits (746), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 203/701 (28%), Positives = 340/701 (48%), Gaps = 54/701 (7%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           M+ KCGD+  +   F G+   +  SW  I++ C  N    + LL  R M   G + D V 
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             + +   A   +L  GKV HA  +  G E S  V + N+LI+MY +C +++ A   F  
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRV-LGNALINMYGKCRNLDLARAQFDR 119

Query: 237 MT----CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           M      +DVV+WN+++  F  NG  EEA  L  EM++   ++P   T+  ++  C+   
Sbjct: 120 MEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEV-EGIKPSSVTLTCVLESCSGD- 177

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             R+G+  H   +   L  D  +MNSL+  Y++   L ++ L+F AI    D++SWN MI
Sbjct: 178 --RQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAI-DQKDIISWNVMI 234

Query: 353 S-----GLFKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           S     G  +E + L  +            T ++++ +C+    L+   +I       GF
Sbjct: 235 SLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGF 294

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            ++ +  NA+++M+   G L AA +   R+   +  S WN +I    QN   +  ++ F+
Sbjct: 295 DDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVS-WNCLISGYAQNLQGRRCLELFR 353

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M  Q+    +SVT V+++ AC  +     G+ LH     + + L T V  ALI MYG+C
Sbjct: 354 QM-DQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKC 412

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSIL 576
            +++ A  + E   +  L   N MISA++Q     RA++    ++    + + ++ +  L
Sbjct: 413 EELQFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGAL 472

Query: 577 SACTQLGVLRHGKQIHGHVFHLGF-------QENSFISSALLDMYSNC------------ 617
            AC        G+ ++  V   G+         +  I  ALL MYS C            
Sbjct: 473 EACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQS 532

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   AW+SM++AY + G+  EA+ +  +M + G+ P   +  +++ ACSH+GL+ E 
Sbjct: 533 LSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEA 592

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L     +  +Y        + C+VD+LGR G+LQEA E +  +P +P    W A+L AC+
Sbjct: 593 LVRLAWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACT 652

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            HGD + G + A     L+  + G Y+ LSNMY +   W+D
Sbjct: 653 VHGDLERGARTAGHEALLDSGS-GRYVLLSNMYAS---WED 689



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 317/679 (46%), Gaps = 53/679 (7%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            E +  +F+     ++ +W  ++ AC  N   +  L     M+ EG R D    + I+  
Sbjct: 8   IEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVTILDL 67

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGM----HCA 137
                 L+QG+V H   +  G+ + S  L N  +NMY KC +L+ +   F  M    H  
Sbjct: 68  CAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDHGR 127

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D V+WN++++   HN Y E+    F+EM   G +  +V+L+  +   +C G+   GK+ H
Sbjct: 128 DVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVL--ESCSGD-RQGKLFH 184

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              + LG +   +  + NSL+ MY++CG +E +   F  +  KD++SWN +I   A  G 
Sbjct: 185 DRVLDLGLQGDEF--LMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGS 242

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EEA +LL E+ L    EPD  T ++++  C+    L    ++           DLL+ N
Sbjct: 243 SEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGN 302

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           ++++ + KS  L  A   F+ + P+ ++VSWN +ISG            LF++M     +
Sbjct: 303 AVVNMFGKSGCLDAARATFDRL-PVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVK 361

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +  T +++L +C++  +L+FG+ +H      G   +T+   AL++MY  C +L  A  L
Sbjct: 362 ANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEELQFAQEL 421

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
           L+R       +C N++I A  Q GH + A+K    M        D VT +  + AC   +
Sbjct: 422 LERYQSTGLVAC-NVMISAYAQVGHSERAMKFLHGM-DLAGVKADVVTYIGALEACACSK 479

Query: 486 LAFEGKSLHGLALKS-----LMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLC 538
              +G++++   + +     L+   T   ++ AL+ MY +C  +  A    +S  +  L 
Sbjct: 480 DFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLL 539

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
            W  M++A++       AL +   ++ +   P++++  +++ AC+  G+L      H  +
Sbjct: 540 AWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLL------HEAL 593

Query: 596 FHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
             L +             Y        +  ++   G  G+  EA EL H M      P  
Sbjct: 594 VRLAWVYGD---------YGTAMGAGLYECVVDVLGRMGRLQEAEELMHAM---PYEPDS 641

Query: 656 SSVISLLSACSHSGLVDEG 674
            + ++LL AC+  G ++ G
Sbjct: 642 LAWMALLGACTVHGDLERG 660



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 154/608 (25%), Positives = 261/608 (42%), Gaps = 65/608 (10%)

Query: 12  SLLTAYSNVSYFESSLALF----YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           +L+  Y      + + A F    ++   +DVVTWN+++ A   N  +      F EM  E
Sbjct: 99  ALINMYGKCRNLDLARAQFDRMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVE 158

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GI+  S TL  ++ + +     +QG++ H   +  G+  D  L N  V MYA+CG L  S
Sbjct: 159 GIKPSSVTLTCVLESCSGD---RQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEES 215

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASAC 186
              F  +   D +SWN ++S        E+ +   RE+   G  + D V+  S V A +C
Sbjct: 216 RLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSC 275

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LG+L     I  L    G++D   +   N++++M+ + G ++AA   F  +  K+VVSWN
Sbjct: 276 LGDLDLCFTIQELVSSAGFDDDLLLG--NAVVNMFGKSGCLDAARATFDRLPVKNVVSWN 333

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I G+A N +     +L  +M     V+ +  T V+L+  C+    L  GR +H     
Sbjct: 334 CLISGYAQNLQGRRCLELFRQMD-QEGVKANSVTFVSLLDACSTIPALDFGRELHLRITA 392

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------KEML 360
             L    ++  +L++ Y K   L  A+ L         LV+ N MIS         + M 
Sbjct: 393 AGLELHTVVATALINMYGKCEELQFAQELLERYQSTG-LVACNVMISAYAQVGHSERAMK 451

Query: 361 YLCS------QFSFSTLLAILPSCNSPESLEFGKSIH------CW--QLKLGFSNNTIGV 406
           +L        +    T +  L +C   +    G++++       W  QL   ++++ I  
Sbjct: 452 FLHGMDLAGVKADVVTYIGALEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIK- 510

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+ MY  CG +  A + LQ +S     + W  ++ A    G   EA++    M Q   
Sbjct: 511 GALLGMYSKCGCVDDALAALQSLSSRGLLA-WTSMLAAYAHVGRASEALRVLGQM-QHDG 568

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PD V    V+ AC +  L      LH   ++            L  +YG         
Sbjct: 569 VVPDDVAFSAVVFACSHAGL------LHEALVR------------LAWVYGD-------- 602

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
             + +     L  + C++    +      A EL   + +EP+ ++ +++L ACT  G L 
Sbjct: 603 --YGTAMGAGL--YECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDLE 658

Query: 587 HGKQIHGH 594
            G +  GH
Sbjct: 659 RGARTAGH 666



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 210/494 (42%), Gaps = 33/494 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-R 70
           SL+  Y+     E S  +F     KD+++WN MI+           +    E+  EG   
Sbjct: 201 SLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPE 260

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T + +V A + +  L     +  L   AG   D  L N  VNM+ K G L+++  T
Sbjct: 261 PDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARAT 320

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSWN ++SG   N    +CL  FR+M   G +A++V+  S + A + +  L
Sbjct: 321 FDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPAL 380

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            +G+ +H      G E   +  V  +LI+MY +C +++ A+          +V+ N +I 
Sbjct: 381 DFGRELHLRITAAGLE--LHTVVATALINMYGKCEELQFAQELLERYQSTGLVACNVMIS 438

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A  G  E A   LH M L   V+ D+ T +  +  CA S    +G++V+   +     
Sbjct: 439 AYAQVGHSERAMKFLHGMDLA-GVKADVVTYIGALEACACSKDFSKGQAVYDRVVSTGWI 497

Query: 311 YDLL-------MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE 358
             LL       +  +L+  YSK   +  A     +++    L++W SM++     G   E
Sbjct: 498 SQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRG-LLAWTSMLAAYAHVGRASE 556

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKS----IHCWQLKLGFSNNTIGVNALMHMYI 414
            L +  Q        ++P   +  ++ F  S    +H   ++L +     G      +Y 
Sbjct: 557 ALRVLGQMQHD---GVVPDDVAFSAVVFACSHAGLLHEALVRLAWVYGDYGTAMGAGLY- 612

Query: 415 NC--------GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            C        G L  A  L+  + +  D+  W  ++ ACT +G  +   +T        +
Sbjct: 613 ECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDLERGARTAGHEALLDS 672

Query: 467 ASPDSVTLVNVISA 480
            S   V L N+ ++
Sbjct: 673 GSGRYVLLSNMYAS 686



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 169/368 (45%), Gaps = 29/368 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN----RCVVMG 57
           GF   L    +++  +      +++ A F     K+VV+WN +I+   +N    RC    
Sbjct: 293 GFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRC---- 348

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  F +M +EG++ +S T + ++ A + +  L  GR +H     AG+   + +    +NM
Sbjct: 349 LELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINM 408

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y KC +L  ++           V+ N ++S      + E+ + +   M  +G +AD V+ 
Sbjct: 409 YGKCEELQFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTY 468

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS-----VTNSLISMYSQCGDIEAAER 232
             A+ A AC  + S G+ ++   +  G+      S     +  +L+ MYS+CG ++ A  
Sbjct: 469 IGALEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALA 528

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
           A   ++ + +++W +++  +A  G+  EA  +L +MQ    V PD      ++  C+ + 
Sbjct: 529 ALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQ-HDGVVPDDVAFSAVVFACSHAG 587

Query: 293 LLREGRSVHGYAIRRLL----GYDLLMMNSL----MDFYSKSNSLSKAELLFNAIAPMND 344
           LL E       A+ RL      Y   M   L    +D   +   L +AE L +A+    D
Sbjct: 588 LLHE-------ALVRLAWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPD 640

Query: 345 LVSWNSMI 352
            ++W +++
Sbjct: 641 SLAWMALL 648


>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
 gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 197/740 (26%), Positives = 371/740 (50%), Gaps = 48/740 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD + LL        +  LK+   +H      G+  D  L +  ++ YA  G L+ S   
Sbjct: 48  FDKSALLF--QGCADVRFLKK---IHANVFTHGLCWDVILGSKILSCYANLGALHESRLV 102

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D   WN+ M       YPE+ ++ ++ +  +    +  +++  + +   L  L
Sbjct: 103 FQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNL 162

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +HA  +KL    + +V   +SLI +YS+      +   F  +  KD+V++ ++I 
Sbjct: 163 YLGKGVHADSLKLALSGNKFVG--SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMIT 220

Query: 251 GFA--LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           G++  ++     AF++  +M L  ++E +  T+V+L+ +  +   L+EG+S+H Y+IRR 
Sbjct: 221 GYSETVDSIAWNAFEIATDM-LQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRA 279

Query: 309 LGY-DLLMMNSLMDFYSKSNSL-SKAELLFNAIAPMNDLVSWNSMISGL------FKEML 360
           +G  D ++  S+++FY++  +  S A +L N+      + SWN+++SGL      F  + 
Sbjct: 280 IGVSDDILETSIVNFYTRCGAYQSAATVLQNSKGT---VASWNALLSGLNRAGQSFNAIQ 336

Query: 361 YLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           YL              T   +L +C       F  SIH + ++     + +   AL+ +Y
Sbjct: 337 YLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVY 396

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  ++ +  L  ++    D   +N +I    QN    EA      M   +  +PD  T
Sbjct: 397 TKCTRVMRSKYLFDQLIIK-DVVSYNAMIYGYLQNDMANEATSLLNYM-MAEGVAPDFAT 454

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++++++A  +      G+ +HG A++     D  V+N ++ MY  C  I +A  +F+S  
Sbjct: 455 VLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLE 514

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQ 590
             NL +W  M+     N      ++LF+ ++    +P+ +S+V+ + A + LG L   KQ
Sbjct: 515 KKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQ 574

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH  V+    +++   +++L+  Y+ C               ++   W++MISAY  HG 
Sbjct: 575 IHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGF 634

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
               +E+F +M    I+P + +  ++L+ACSH+GLV +G + +N+M   Y V P+ EH+ 
Sbjct: 635 HINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYG 694

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR+G L++ Y+FIK   ++ K  ++ A+LSAC  HG+T++   +++ L +  P+
Sbjct: 695 CMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQ 754

Query: 756 NVGYYISLSNMYVALGRWKD 775
           N G Y  +S +Y   G+W +
Sbjct: 755 NPGIYALISEVYAQEGQWNE 774



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 319/681 (46%), Gaps = 50/681 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + +L+ Y+N+     S  +F +  N D+  WN+ +            +  +  +    I 
Sbjct: 84  SKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIG 143

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           F+  T+  ++ + T++  L  G+ VH  S+K  +  +  + +  + +Y+K    N S   
Sbjct: 144 FNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGV 203

Query: 131 FSGMHCADTVSWNTIMSGCLH--NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  +   D V++ ++++G     ++          +M  +  + + V+L S +  +  LG
Sbjct: 204 FEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQIAGNLG 263

Query: 189 ELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            L  GK +H   I+  +G  D     +  S+++ Y++CG  ++A       +   V SWN
Sbjct: 264 ALQEGKSLHCYSIRRAIGVSDDI---LETSIVNFYTRCGAYQSAATVLQN-SKGTVASWN 319

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A++ G    G+   A   L  M     V PD  T   ++S CA+        S+H Y IR
Sbjct: 320 ALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIR 379

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R +  D+++  +L++ Y+K   + +++ LF+ +  + D+VS+N+MI G            
Sbjct: 380 RFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLI-IKDVVSYNAMIYGYLQNDMANEATS 438

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L   M+       F+T+L++L +      L  G+ IH + ++ GF ++    N +++MY 
Sbjct: 439 LLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYS 498

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG + AA ++   +   +  S W  ++  C  NGH  E ++ F+ M Q+    PDSV+L
Sbjct: 499 ACGKIAAARAIFDSLEKKNLVS-WTAMMKGCLSNGHADEVVQLFQVM-QKYGEKPDSVSL 556

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V  + A  +L      K +H    +SL+  D    N+LI+ Y +C  +  ++ +F S   
Sbjct: 557 VTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKY 616

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            NL TWN MISA++ +   +  LE+F+ +E    +P+E++  ++L+AC+  G+++ G +I
Sbjct: 617 RNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRI 676

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG---KGWEAIELFHEMCN 648
                      NS  S     +YS       +  M+   G  G    G++ I+L      
Sbjct: 677 F----------NSMTS-----VYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKL------ 715

Query: 649 SGIRPTKSSVISLLSACSHSG 669
           S ++   +   +LLSAC   G
Sbjct: 716 STLKDKSTIFCALLSACRTHG 736



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 156/288 (54%), Gaps = 3/288 (1%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y+  +    S  LF +   KDVV++NAMI   ++N            M+ EG+
Sbjct: 389 TTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGV 448

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  T+L +++A      L +GR +H  +I+ G  +D  + N  + MY+ CG + ++  
Sbjct: 449 APDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARA 508

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   + VSW  +M GCL N + ++ +  F+ M   GE+ D+VSL +AV A + LG 
Sbjct: 509 IFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGH 568

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+  K IH    +   E     +  NSLIS Y++CG ++ +   F+ +  +++ +WNA+I
Sbjct: 569 LNGLKQIHCFVYRSLLEKDKITA--NSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMI 626

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +A++G      ++  +M+   +++PD  T  T+++ C+ + L+++G
Sbjct: 627 SAYAMHGFHINVLEMFKQME-EENIQPDELTFSTVLTACSHAGLVKDG 673



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +     +L  YS      ++ A+F     K++V+W AM+  C+ N      +  F
Sbjct: 482 GFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLF 541

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G + DS +L+  V A++ +  L   + +HC   ++ +  D    N  ++ YAKC
Sbjct: 542 QVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKC 601

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ S   F  +   +  +WN ++S    + +    L  F++M     Q D ++ S+ +
Sbjct: 602 GKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVL 661

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYS 222
            A +           HA  +K G+       + NS+ S+YS
Sbjct: 662 TACS-----------HAGLVKDGWR------IFNSMTSVYS 685


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 169/546 (30%), Positives = 279/546 (51%), Gaps = 68/546 (12%)

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
           + + +H   +R  L    L+ ++++  YS  N L  + L+FN++      ++W S+I   
Sbjct: 23  QAKQLHAQILRTSLPSPSLL-STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81

Query: 356 FKEMLYLCSQFSFSTLLA------------ILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
               L+L S   F  +LA            +L SC   + L FG+S+H   ++LG   + 
Sbjct: 82  TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL 141

Query: 404 IGVNALMHMY--------INC------------------------GDLVAAFSLLQRISH 431
              NALM+MY        +N                         G L   F ++ +   
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK--- 198

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             D   WN VI    QNG  ++A+   + M    +  PDS TL +V+          +GK
Sbjct: 199 -RDIVSWNTVISGNAQNGMHEDALMMVREMGNA-DLRPDSFTLSSVLPIFAEYVNLLKGK 256

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +HG A+++    D  + ++LI MY +C  +  +  VF      +  +WN +I+   QN 
Sbjct: 257 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 316

Query: 552 AEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
                L+ F+ +   + +PN +S  SI+ AC  L  L  GKQ+HG++    F  N FI+S
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376

Query: 609 ALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL+DMY+ C +                 +W++MI  Y  HG  ++AI LF  M   G++P
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + +++L+ACSH+GLVDE  +Y+N+M ++Y + P  EH+  + D+LGR G+L+EAYEF
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 496

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I ++ I+P   VW  +L+AC  H + ++ ++V++ LF ++P+N+G Y+ LSN+Y A GRW
Sbjct: 497 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 556

Query: 774 KDAVEI 779
           KDA ++
Sbjct: 557 KDARKL 562



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 230/524 (43%), Gaps = 62/524 (11%)

Query: 11  TSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +++L+ YSN++    SL +F         + W ++I     +   +  L FF +M+  G 
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN---- 125
             D      ++ + T M  L+ G  VH   I+ GM  D   CN  +NMY+K   L     
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 126 -------------------------SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
                                    S    F  M   D VSWNT++SG   N   E  L+
Sbjct: 163 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 222

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
             REMG +  + D+ +LSS +   A    L  GK IH   I+ GY+   ++   +SLI M
Sbjct: 223 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIG--SSLIDM 280

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y++C  ++ + R F+ +   D +SWN+II G   NG F+E      +M L+  ++P+  +
Sbjct: 281 YAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQM-LIAKIKPNHVS 339

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
             +++  CA    L  G+ +HGY IR     ++ + ++L+D Y+K  ++  A  +F+ + 
Sbjct: 340 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 399

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
            + D+VSW +MI G            LFK M     + ++   +A+L +C+       G 
Sbjct: 400 -LYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHA-----GL 453

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIV 441
               W+     + +   +  L H Y    DL+        A+  +  +      S W+ +
Sbjct: 454 VDEAWKYFNSMTQDYRIIPGLEH-YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTL 512

Query: 442 IVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACGN 483
           + AC  + + + A K  K +     QN     V L N+ SA G 
Sbjct: 513 LAACRVHKNIELAEKVSKKLFTVDPQNIGA-YVLLSNIYSAAGR 555



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 174/416 (41%), Gaps = 59/416 (14%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +L + +S +S    K +H   L+    + ++ ++ ++ +Y N   L  +  +   +   
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSL-LSTILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
             T  W  +I   T +G F  ++  F  M       PD     +V+ +C  ++    G+S
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLAS-GKYPDHNVFPSVLKSCTLMKDLRFGES 127

Query: 493 LHGLALKSLMGLDTRVQNALITMY------------------GRCRDIKSAS-------- 526
           +HG  ++  MG D    NAL+ MY                  G+  D+ S          
Sbjct: 128 VHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLG 187

Query: 527 ---TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
               VFE     ++ +WN +IS  +QN     AL + R +   +  P+  ++ S+L    
Sbjct: 188 SLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFA 247

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSS 625
           +   L  GK+IHG+    G+  + FI S+L+DMY+ C                   +W+S
Sbjct: 248 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNS 307

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +I+    +G   E ++ F +M  + I+P   S  S++ AC+H   +  G Q     L  Y
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ-----LHGY 362

Query: 686 DVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            +R   + +V I    VDM  + G ++ A      + +      W AM+   + HG
Sbjct: 363 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS-WTAMIMGYALHG 417



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ A +   +SL+  Y+  +  + S  +FY     D ++WN++I  CV+N     GL FF
Sbjct: 266 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 325

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+   I+ +  +   I+ A   +  L  G+ +H   I++    +  + +  V+MYAKC
Sbjct: 326 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 385

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ ++   F  M   D VSW  ++ G   + +    +  F+ M   G + + V+  + +
Sbjct: 386 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 445

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +           HA     G  D  +    NS+   Y     +E             
Sbjct: 446 TACS-----------HA-----GLVDEAW-KYFNSMTQDYRIIPGLE------------- 475

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
              + A+ D     G+ EEA++ + +M     +EP  +   TL++ C
Sbjct: 476 --HYAAVADLLGRVGRLEEAYEFISDMH----IEPTGSVWSTLLAAC 516


>gi|125539724|gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 212/743 (28%), Positives = 351/743 (47%), Gaps = 43/743 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++ +V W  +++    +      L     MVE  +R D+    + + A      L  GR 
Sbjct: 66  DRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQ 125

Query: 95  VHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           VH  + K G + AD  + N  V MYA C  L  +E  FSG+   D+VSW +++S    N 
Sbjct: 126 VHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENG 185

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
              + L+ F EM   G   D  +LS A+ A++ LG +  G  +H   IK G+  S ++  
Sbjct: 186 CDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLE- 244

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-R 272
            N LI  Y +C +++  ++ F  M  KD+VSWN +I  +A N   EEA  L+H   LM +
Sbjct: 245 -NCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEA--LVHFRDLMYK 301

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
             E D  T+ +++ +         GR +HGY IR  L  D  +M++LMD Y    +L K+
Sbjct: 302 CAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVMSALMDMYVNWATLRKS 361

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
                ++ P+  L  + S + G   + +   S          L SC S   L  G+ +H 
Sbjct: 362 R----SMLPLRMLKYYLS-VQGKLDQFIVASS----------LKSCASDLDLAAGRMLHA 406

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             LK   + +   +++L+ MY  CG L  A  L  R + +  T  W+ +I     NG F+
Sbjct: 407 CVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSR-TKDPCTVAWSAIISGSCLNGQFE 465

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
            AI  F++M Q ++  P+  T  +V++AC  L     G  +H  ++++  G    V  +L
Sbjct: 466 RAIHLFRTM-QLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSL 524

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISI 572
           I+ Y R      A  +  S  N  + +W  +   F++    +  L LF  ++     +  
Sbjct: 525 ISFYLREGQFNQALRLCLSLSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDY 583

Query: 573 VS---ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            +   ILS+C +   L  G Q H ++   G      +   L+DMYS C            
Sbjct: 584 PTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRN 643

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +++++W+S+I A   +G    AI LF +M      P   S +S+L AC+  GLV+E 
Sbjct: 644 TSGRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLSFLSVLKACAEIGLVNEA 703

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN-LPIQPKPGVWGAMLSAC 733
            Q++ +M E Y ++P  EH+  ++++LGR+G  +EA  FI + +P +     W  + SA 
Sbjct: 704 FQFFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFIDSVVPSESGASAWSLLCSAA 763

Query: 734 SHHGDTKMGKQVAELLFKLEPEN 756
             +G+ K  +  A+ L KL P+ 
Sbjct: 764 KQNGNAKTMRLAADRLSKLTPDG 786



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 158/651 (24%), Positives = 272/651 (41%), Gaps = 65/651 (9%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A L  +  L+T Y++      +  +F      D V+W +M++A  EN C    L  F EM
Sbjct: 138 ADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEM 197

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +  G+  D+ TL + + A + +  ++ G  +HC  IK+G +    L N  +  Y +C +L
Sbjct: 198 IHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCREL 257

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
              +  F  M+  D VSWN ++     N   E+ L++FR++ +   + D  +L S +   
Sbjct: 258 QLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVI 317

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                  YG+ IH   I+ G +   Y  V ++L+ MY     +  +         K  +S
Sbjct: 318 TRRCAFDYGREIHGYLIRAGLDSDKY--VMSALMDMYVNWATLRKSRSMLPLRMLKYYLS 375

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
               +D F                            V + +  CA  L L  GR +H   
Sbjct: 376 VQGKLDQF---------------------------IVASSLKSCASDLDLAAGRMLHACV 408

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG--------- 354
           ++  +  D  +++SL+D Y+K  SL +A +LF+    P    V+W+++ISG         
Sbjct: 409 LKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSRTKDPCT--VAWSAIISGSCLNGQFER 466

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF+ M     Q +  T  ++L +C +   +  G  IH   ++ G+  +   + +L+ 
Sbjct: 467 AIHLFRTMQLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLIS 526

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y+  G    A  L   +S NS+ S W  +     + G     +  F  + Q+     D 
Sbjct: 527 FYLREGQFNQALRLCLSLS-NSEIS-WGTLFQEFAELGDHLGILNLFH-VIQRSGGVLDY 583

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T   ++S+CG      EG   H   +K  +     + + LI MY  C  +  A   F +
Sbjct: 584 PTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRN 643

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               N  +W  +I A  +N     A+ LF  +   E  PN +S +S+L AC ++G++   
Sbjct: 644 TSGRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLSFLSVLKACAEIGLVNEA 703

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
            Q              F+S  + ++Y    S   +S MI   G  G   EA
Sbjct: 704 FQF-------------FVS--MTEVYKIQPSEEHYSHMIEVLGRAGMFKEA 739



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 226/501 (45%), Gaps = 45/501 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+        L+  Y      +    +F E   KD+V+WN +I    +N C    L  F
Sbjct: 236 GFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEALVHF 295

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++ +    D  TL  I+  +T+      GR +H   I+AG+ +D  + +  ++MY   
Sbjct: 296 RDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVMSALMDMY--- 352

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                             V+W T+      +  P + L Y+  +     + D   ++S++
Sbjct: 353 ------------------VNWATLRKS--RSMLPLRMLKYYLSV---QGKLDQFIVASSL 389

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A   +L+ G+++HA  +K      P+  V +SL+ MY++CG +E A   F       
Sbjct: 390 KSCASDLDLAAGRMLHACVLKFDVNPDPF--VISSLVDMYAKCGSLEEAHILFSRTKDPC 447

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+W+AII G  LNG+FE A  L   MQL   V+P+  T  ++++ C     +  G  +H
Sbjct: 448 TVAWSAIISGSCLNGQFERAIHLFRTMQL-EHVQPNEFTYTSVLTACMALGDVVSGMEIH 506

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM---------- 351
             +IR   G    ++ SL+ FY +    ++A  L  +++  N  +SW ++          
Sbjct: 507 SNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLS--NSEISWGTLFQEFAELGDH 564

Query: 352 --ISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             I  LF  +        + T   IL SC     L  G   H + +K G S+     + L
Sbjct: 565 LGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYL 624

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  AF   +  S   ++S W  +I+A  +NG  + AI+ F  M +++  SP
Sbjct: 625 IDMYSGCGSLTHAFEAFRNTS-GRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEK-SP 682

Query: 470 DSVTLVNVISACGNLELAFEG 490
           +S++ ++V+ AC  + L  E 
Sbjct: 683 NSLSFLSVLKACAEIGLVNEA 703


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 184/599 (30%), Positives = 302/599 (50%), Gaps = 41/599 (6%)

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+S Y+  GD+ +A R        D  ++   +   A  G+  +A  L    + MR   P
Sbjct: 61  LLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALAL---HRGMRRRCP 117

Query: 277 DIATVVTLISLC----ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           +    V L+SL       S   R GR +H  A++   G D  +MN L+D Y+K+  L  A
Sbjct: 118 EAHDDVVLLSLALKASVRSADFRYGRRLHCNAVK-AGGADGFVMNCLVDMYAKAGDLENA 176

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             +F+ I   N +VSW SM+SG            LF EM       S  T+ ++L +C  
Sbjct: 177 RKVFDRILGRN-VVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTM 235

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             SL  G+ +H   +K G   N     A++ MY+ CG++  A  L   +    D   W  
Sbjct: 236 LGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGF-VDLVLWTT 294

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +IV  TQNG   +A+  F S  +  +  P+SVT+  V+SA   L     G+ +H +++K 
Sbjct: 295 MIVGYTQNGSPLDALLLF-SDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKL 353

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
           L+  +  V NAL+ MY +C+ +  A+ +F    N ++ TWN +I+ + +N     AL LF
Sbjct: 354 LVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLF 413

Query: 561 RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
             +  +   P+ ISIV+ LSAC  LG L  GK  H +     F  N ++++ALL++Y+ C
Sbjct: 414 SQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKC 473

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          +++  W +MI  YG  G    +I+L ++M    I+P +    S+L
Sbjct: 474 ADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSIL 533

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           S CSH+G+V  G   +++M + +++ P  +H+ C+VD+L R+G L+EA EFI+ +P+   
Sbjct: 534 STCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPAD 593

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             +WGA L  C  H   + G++    +  L P+   +Y+ +SN+Y + GRW  ++ I +
Sbjct: 594 ISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRR 652



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/504 (27%), Positives = 238/504 (47%), Gaps = 21/504 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           G L  L   T LL+ Y+ +    S+  +  ET   D  T+   +   A        + LH
Sbjct: 50  GLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALH 109

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
                       D   L + + A  +    + GR +HC ++KAG  AD  + N  V+MYA
Sbjct: 110 RGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGG-ADGFVMNCLVDMYA 168

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K GDL ++   F  +   + VSW +++SGCL N + E+ L  F EM          +++S
Sbjct: 169 KAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMAS 228

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   LG L  G+ +H   IK G   +P+  +T +++ MY +CG++E A R F  +  
Sbjct: 229 VLMACTMLGSLHQGRWVHGSVIKHGMVFNPF--ITAAVLDMYVKCGEVEDARRLFDELGF 286

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D+V W  +I G+  NG   +A  L  + + +  V P+  T+ T++S  A    L  GR 
Sbjct: 287 VDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIV-PNSVTIATVLSASAQLRNLSLGRL 345

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H  +++ L+  + ++MN+L+D Y+K  +LS+A  +F  I+   D+V+WNS+I+G     
Sbjct: 346 IHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISN-KDVVTWNSLIAGYVEND 404

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF +M    S     +++  L +C     L  GK  H + +K  F +N     
Sbjct: 405 MGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNT 464

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+++Y  C DL +A  +   +S  +  + W  +I      G    +I     M  + N 
Sbjct: 465 ALLNLYNKCADLPSAQRVFSEMSERNSVT-WGAMIGGYGMQGDSAGSIDLLNKML-KDNI 522

Query: 468 SPDSVTLVNVISACGNLELAFEGK 491
            P+ V   +++S C +  +   GK
Sbjct: 523 QPNEVVFTSILSTCSHTGMVSVGK 546



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 242/505 (47%), Gaps = 28/505 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+     E++  +F     ++VV+W +M++ C++N     GL  F EM EE +   
Sbjct: 163 LVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPS 222

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T+  ++ A T +  L QGR VH   IK GM+ +  +    ++MY KCG++  +   F 
Sbjct: 223 EYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFD 282

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   D V W T++ G   N  P   LL F +  +     ++V++++ ++ASA L  LS 
Sbjct: 283 ELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSL 342

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G++IHA+ +KL   ++    V N+L+ MY++C  +  A   F  ++ KDVV+WN++I G+
Sbjct: 343 GRLIHAMSVKLLVIENDV--VMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGY 400

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             N    EA  L  +M++  S  PD  ++V  +S C     L  G+  H YA++R    +
Sbjct: 401 VENDMGNEALMLFSQMRVQGS-SPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSN 459

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           + +  +L++ Y+K   L  A+ +F+ ++  N  V+W +MI G            L  +ML
Sbjct: 460 VYVNTALLNLYNKCADLPSAQRVFSEMSERNS-VTWGAMIGGYGMQGDSAGSIDLLNKML 518

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN---ALMHMYINCG 417
               Q +     +IL +C+    +  GK   C+     + N T  +     ++ +    G
Sbjct: 519 KDNIQPNEVVFTSILSTCSHTGMVSVGKM--CFDSMAQYFNITPSMKHYACMVDVLARAG 576

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A   +Q++   +D S W   +  C  +   +   +    M       PD   L++ 
Sbjct: 577 NLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMS- 635

Query: 478 ISACGNLELAFEGKSLHGLALKSLM 502
                NL  ++ G+    LA++ LM
Sbjct: 636 -----NLYTSY-GRWDKSLAIRRLM 654


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/624 (29%), Positives = 309/624 (49%), Gaps = 38/624 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+  + +HA  +  G+     V +   L+  Y++ G+   A     GM  ++  +WNA I
Sbjct: 55  LAEARRLHAALLVGGHHRRGAV-LAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAI 113

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR----SVHGYAI 305
            G   +G+F EA +    M    SV  D  T   +I  CA   ++ +GR    +V    +
Sbjct: 114 KGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVV 173

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
           R ++   + +  +L+D ++K   L +A  +F ++    DL +W +MI G      +L + 
Sbjct: 174 RGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLE-RDLAAWTAMIGGAVHAGDWLDAM 232

Query: 366 FSFSTLLA------------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             FS + +            ++P+C   + L  G  +H   ++ G  ++T   NAL+ MY
Sbjct: 233 SLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMY 292

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A  +   I    D   W+ +I   +QNG    ++  F  M       P+S T
Sbjct: 293 CKCGCLGMADRVFWSIGFK-DVVSWSTLIAGYSQNGKDHVSVNLFTEMVTA-GLKPNSNT 350

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           + +++ +   ++L   GK +HG +L++       + +A I  Y R   I+ A  V E   
Sbjct: 351 MASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMP 410

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
             +L  WN M++ ++ N     AL  FR L+   F P+ +++VS+L  C     L  GK+
Sbjct: 411 KRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKE 470

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H +V          +S+AL+DMY  C               +  A ++++IS++G HG 
Sbjct: 471 LHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGH 530

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             EAI LF  M   GI P K + ++LLS+CSH+GL+++GL +Y+ ML++Y++ P  EH+ 
Sbjct: 531 EDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYS 590

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+  RSGKL +A++F+ +L  + +  V G +L AC  H    + + VA+ +F+  P 
Sbjct: 591 CVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPS 650

Query: 756 NVGYYISLSNMYVALGRWKDAVEI 779
           + GY+I LSN+Y   G W     I
Sbjct: 651 DPGYHILLSNIYANAGMWSHVTRI 674



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/580 (26%), Positives = 279/580 (48%), Gaps = 26/580 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG- 68
           +  L+ AY+ +     +L++      ++   WNA I   V++      L  +  MV +G 
Sbjct: 78  AAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGS 137

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVH---CLSIKAGMIADSSLCN-VFVNMYAKCGDL 124
           +  D  T   ++ A   +  ++QGR+V       +  G++A S       V+M+AKCG L
Sbjct: 138 VAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCL 197

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             +   F  M   D  +W  ++ G +H       +  F  M   G  AD+V +++ + A 
Sbjct: 198 GEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPAC 257

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
               EL  G V+H   ++ G  D   VS  N+L+ MY +CG +  A+R FW +  KDVVS
Sbjct: 258 GRAKELRTGMVLHGCAVRCGVGDDTCVS--NALVDMYCKCGCLGMADRVFWSIGFKDVVS 315

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+ +I G++ NGK   + +L  EM +   ++P+  T+ +++   ++  L R G+ +HG++
Sbjct: 316 WSTLIAGYSQNGKDHVSVNLFTEM-VTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFS 374

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------- 355
           +R        + ++ +DFYS+  S+ +AE++   + P  DLV WNSM++G          
Sbjct: 375 LRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLE-LMPKRDLVIWNSMVAGYAVNGNTDSA 433

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              F+ +  +  +    T++++LP CN    L  GK +H + ++   S+     NAL+ M
Sbjct: 434 LCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDM 493

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  C  L     + Q ++ + DT+ +N +I +  ++GH  EAI  F  M ++   +PD V
Sbjct: 494 YCKCCCLEKGKEIFQLVT-DRDTATYNTLISSFGKHGHEDEAIMLFDLM-KRDGIAPDKV 551

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSASTVFES 531
           T V ++S+C +  L  +G   + + L+   +       + ++ +Y R   +  A     S
Sbjct: 552 TFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSS 611

Query: 532 CYN-CNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNE 569
             +   +    C++ A    N+ ++  L   R  E  P++
Sbjct: 612 LQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSD 651



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 258/535 (48%), Gaps = 34/535 (6%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QA 172
            V+ YA+ G+   +     GM   ++ +WN  + G + +    + L  +  M   G   A
Sbjct: 81  LVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAA 140

Query: 173 DNVSLSSAVAASACLGELSYGKVIHA---LGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           D  +    + A A LG +  G+++       +  G   +P V V  +L+ M+++CG +  
Sbjct: 141 DGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVV-APSVFVQCALVDMFAKCGCLGE 199

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A   F  M  +D+ +W A+I G    G + +A  L   M+       D   + T+I  C 
Sbjct: 200 ARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMR-SEGFLADSVIIATVIPACG 258

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            +  LR G  +HG A+R  +G D  + N+L+D Y K   L  A+ +F +I    D+VSW+
Sbjct: 259 RAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIG-FKDVVSWS 317

Query: 350 SMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           ++I+G            LF EM+    + + +T+ +ILPS +  +    GK IH + L+ 
Sbjct: 318 TLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRN 377

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF  +    +A +  Y   G +  A  +L+ +    D   WN ++     NG+   A+  
Sbjct: 378 GFDQSKFLGSAFIDFYSRQGSIREAEIVLELMP-KRDLVIWNSMVAGYAVNGNTDSALCA 436

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+++ Q+    PD VT+V+V+  C +     +GK LH   ++  M     V NALI MY 
Sbjct: 437 FRAL-QKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYC 495

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
           +C  ++    +F+   + +  T+N +IS+F ++  E  A+ LF  ++ +   P++++ V+
Sbjct: 496 KCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVA 555

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS-----SALLDMYSNC-KSNAAW 623
           +LS+C+  G++  G     H + +  Q+ +        S ++D+YS   K + AW
Sbjct: 556 LLSSCSHAGLIEKGL----HFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAW 606



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 227/484 (46%), Gaps = 21/484 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  ++       + ++F     +D+  W AMI   V     +  +  F  M  EG   
Sbjct: 186 ALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLA 245

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS  +  ++ A  +   L+ G V+H  +++ G+  D+ + N  V+MY KCG L  ++  F
Sbjct: 246 DSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVF 305

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSW+T+++G   N      +  F EM  +G + ++ +++S + + + +    
Sbjct: 306 WSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFR 365

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK IH   ++ G++ S ++   ++ I  YS+ G I  AE     M  +D+V WN+++ G
Sbjct: 366 HGKEIHGFSLRNGFDQSKFLG--SAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAG 423

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A+NG  + A      +Q +    PD  TVV+++ +C     L +G+ +H Y +R  +  
Sbjct: 424 YAVNGNTDSALCAFRALQKV-GFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSS 482

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLY-LC 363
              + N+L+D Y K   L K + +F  +    D  ++N++IS   K        ML+ L 
Sbjct: 483 VCSVSNALIDMYCKCCCLEKGKEIFQLVTD-RDTATYNTLISSFGKHGHEDEAIMLFDLM 541

Query: 364 SQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG---VNALMHMYINC 416
            +   +    T +A+L SC+    +E  K +H + + L   N + G    + ++ +Y   
Sbjct: 542 KRDGIAPDKVTFVALLSSCSHAGLIE--KGLHFYDIMLQDYNISPGKEHYSCVVDLYSRS 599

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A+  +  +   ++      ++ AC  +     A    K + +Q  + P    L++
Sbjct: 600 GKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLS 659

Query: 477 VISA 480
            I A
Sbjct: 660 NIYA 663


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 289/580 (49%), Gaps = 42/580 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  ++ VSW ++I     NG+  +A  L   M L      D   + + +  C +   +  
Sbjct: 95  MYGRNPVSWASVIAAHVQNGRAGDALGLFSSM-LRSGTAADQFALGSAVRACTELGDVGT 153

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR VH +A++   G DL++ N+L+  YSK+  +    +LF  I    DL+SW S+I+G  
Sbjct: 154 GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD-KDLISWGSIIAGFA 212

Query: 355 ----------LFKEMLYLCS----QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                     +F+EM+   S    +F F +      +C +  S E+G+ IH   +K    
Sbjct: 213 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFR---ACGAVGSWEYGEQIHGLSIKYRLD 269

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +     +L  MY  C +L +A     RI    D   WN ++ A +  G   EA+  F  
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M +     PD +T+  ++ AC   +  + G+ +H   +K  +  D  V N+L++MY RC 
Sbjct: 329 M-RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCS 387

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEP--NEISIVSILS 577
           D+ SA  VF    + ++ TWN +++A +Q+      L+LF  L + EP  + IS+ ++LS
Sbjct: 388 DLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 447

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNA 621
           A  +LG     KQ+H + F  G  ++  +S+ L+D Y+ C                +   
Sbjct: 448 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 507

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +WSS+I  Y   G   EA +LF  M + GIRP   + I +L+ACS  G V+EG  YY+ M
Sbjct: 508 SWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIM 567

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
             EY + P  EH  CIVD+L R+GKL EA  FI  +P +P   +W  +L+A   H D +M
Sbjct: 568 EPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEM 627

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           GK+ AE +  ++P +   Y+ L N+Y A G W +   + K
Sbjct: 628 GKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKK 667



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 161/534 (30%), Positives = 257/534 (48%), Gaps = 47/534 (8%)

Query: 79  IVSALTQMNCLKQGRVVH-------CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +VSA +++  L QGR VH         S  A +  ++ L N  + MY +           
Sbjct: 50  LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR----------- 98

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                 + VSW ++++  + N      L  F  M  SG  AD  +L SAV A   LG++ 
Sbjct: 99  ------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 152

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  +K   E    + V N+L++MYS+ G ++     F  +  KD++SW +II G
Sbjct: 153 TGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 210

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA  G   EA  +  EM +  S  P+     +    C        G  +HG +I+  L  
Sbjct: 211 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 270

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
           DL +  SL D Y++  +L  A + F  I AP  DLVSWNS+++     GL  E L L S+
Sbjct: 271 DLYVGCSLSDMYARCKNLDSARVAFYRIEAP--DLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
              S       T+  +L +C   ++L  G+ IH + +KLG   +    N+L+ MY  C D
Sbjct: 329 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 388

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L +A  +   I  + D   WN ++ AC Q+ H +E +K F S+  +   S D ++L NV+
Sbjct: 389 LSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVL 446

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNL 537
           SA   L      K +H  A K+ +  D  + N LI  Y +C  +  A  +FE    N ++
Sbjct: 447 SASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDV 506

Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
            +W+ +I  ++Q      A +LF   R L   PN ++ + +L+AC+++G +  G
Sbjct: 507 FSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG 560



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 248/526 (47%), Gaps = 20/526 (3%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           ++ V+W ++I A V+N      L  F  M+  G   D   L   V A T++  +  GR V
Sbjct: 98  RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H  ++K+   +D  + N  V MY+K G ++     F  +   D +SW +I++G     + 
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217

Query: 156 EKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            + L  FREM   G    N     SA  A   +G   YG+ IH L IK   +   YV   
Sbjct: 218 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGC- 276

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            SL  MY++C ++++A  AF+ +   D+VSWN+I++ +++ G   EA  L  EM+    +
Sbjct: 277 -SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR-DSGL 334

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD  TV  L+  C     L  GR +H Y ++  L  D+ + NSL+  Y++ + LS A  
Sbjct: 335 RPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMD 394

Query: 335 LFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQFSFS-------TLLAILPSCNSPE 382
           +F+ I    D+V+WNS+++   +     E+L L S  + S       +L  +L +     
Sbjct: 395 VFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELG 453

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
             E  K +H +  K G  ++ +  N L+  Y  CG L  A  L + + +N D   W+ +I
Sbjct: 454 YFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLI 513

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
           V   Q G+ +EA   F  M +     P+ VT + V++AC  +    EG   + +      
Sbjct: 514 VGYAQFGYAKEAFDLFSRM-RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYG 572

Query: 503 GLDTRVQ-NALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
            + TR   + ++ +  R   +  A+   +   +  ++  W  +++A
Sbjct: 573 IVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAA 618



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL   Y+     +S+   FY     D+V+WN+++ A      +   L  F EM + G+R 
Sbjct: 277 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 336

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+  ++ A    + L  GR++H   +K G+  D S+CN  ++MYA+C DL+S+   F
Sbjct: 337 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 396

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V+WN+I++ C  +N+PE+ L  F  +  S    D +SL++ ++ASA LG   
Sbjct: 397 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 456

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
             K +HA   K G  D   +S  N+LI  Y++CG ++ A R F  M   +DV SW+++I 
Sbjct: 457 MVKQVHAYAFKAGLVDDRMLS--NTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIV 514

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+A  G  +EAFDL   M+ +  + P+  T + +++ C+    + EG   + Y+I     
Sbjct: 515 GYAQFGYAKEAFDLFSRMRSL-GIRPNHVTFIGVLTACSRVGFVNEG--CYYYSIME-PE 570

Query: 311 YDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           Y ++        ++D  +++  L++A    + +    D++ W ++++
Sbjct: 571 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 617



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 224/503 (44%), Gaps = 40/503 (7%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +L+T YS     +    LF    +KD+++W ++I    +    +  L  F EM+ 
Sbjct: 170 LIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIV 229

Query: 67  EG------IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           EG        F S        A   +   + G  +H LSIK  +  D  +     +MYA+
Sbjct: 230 EGSHHPNEFHFGSA-----FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYAR 284

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C +L+S+   F  +   D VSWN+I++         + L+ F EM  SG + D +++   
Sbjct: 285 CKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGL 344

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      L +G++IH+  +KLG +    VSV NSL+SMY++C D+ +A   F  +  +
Sbjct: 345 LCACVGRDALYHGRLIHSYLVKLGLDGD--VSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGR 298
           DVV+WN+I+   A +   EE   L     L+   EP  D  ++  ++S  A+       +
Sbjct: 403 DVVTWNSILTACAQHNHPEEVLKLF---SLLNKSEPSLDRISLNNVLSASAELGYFEMVK 459

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            VH YA +  L  D ++ N+L+D Y+K  SL  A  LF  +    D+ SW+S+I G    
Sbjct: 460 QVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQF 519

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-----QLKLGFSN 401
                   LF  M  L  + +  T + +L +C+    +  G    C+     + + G   
Sbjct: 520 GYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEG----CYYYSIMEPEYGIVP 575

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                + ++ +    G L  A + + ++    D   W  ++ A   +   +   +  + +
Sbjct: 576 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 635

Query: 462 TQ-QQNASPDSVTLVNVISACGN 483
                + S   V L N+ +A GN
Sbjct: 636 LNIDPSHSAAYVLLCNIYAASGN 658


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/596 (30%), Positives = 295/596 (49%), Gaps = 58/596 (9%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD   WN++I   A     + A      MQ   +V  +  T   L+  CA    L     
Sbjct: 16  KDTFHWNSLIAKNATQNP-QTALTFFTRMQ-AHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISGL--- 355
           VH Y  R  L  D     +L+D Y K      A  +F+ +   + D+VSW ++IS     
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 356 ---------FKEMLYL-------CSQFSFSTLLAILPSCN---SPESLEFGKSIHCWQLK 396
                    F  M ++       C      +L A++ +C        L  G ++H   +K
Sbjct: 134 GCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAI 455
            GF  +T   N+++HMY  C D+  A+ +   I     D   WN +I     NG  + A+
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERAL 253

Query: 456 KTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHGLALKS----LMGLDTRVQ 509
           +TF+ M  +  ++  P+ VT++ ++ +C  L        +H          L+  D  V 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL------ 563
            AL+ M+ RC ++  A  +F+     N+  W+ MI+ + Q      AL LFR +      
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
              E +PN +++VS+++AC++LG  R    IH +    G  +++ I+SAL+DM + C   
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         ++  +WSSMI A G HG+G  A+ELF EM   G  P + + IS+LS
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACSH+GLV++G   +N+M ++Y + P  +H+ C+VD+LGR+G L EA+  I N+PI+   
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +WG++L+AC  HG+ K+G+ V + +  L+  +VG+++ L+NMY   GRW D V +
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRM 609



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 46/553 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +KD   WN++I            L FF  M    +  ++ T   ++ A   +  L     
Sbjct: 15  HKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQ 73

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH--CADTVSWNTIMSGCLHN 152
           VH    + G+ AD       V+ Y KCG    +   F  M     D VSW  ++S    N
Sbjct: 74  VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133

Query: 153 NYPEKCLLYFREM----GWSGEQ---ADNVSLSSAVAASA--CLGE-LSYGKVIHALGIK 202
              ++    F  M    GW G +    D VSL + V+A A  C    L  G  +H L +K
Sbjct: 134 GCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEE 260
            G+  S ++   NS++ MYS C D+  A R F G+    +DVVSWN++I GF LNG+ E 
Sbjct: 194 YGFGVSTHLG--NSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAER 251

Query: 261 AFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR----LLGYDLL 314
           A     +M  +   +VEP+  TV+ L+  CA+   +     VH Y   R    L+  D++
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           ++ +L+D +++  +L+ A  +F+ +   N +V W++MI+G            LF++ML  
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKN-VVCWSAMIAGYEQGSCPEEALRLFRQMLME 370

Query: 363 CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +           TL++++ +C+   +      IH + +  G   +    +AL+ M   C
Sbjct: 371 GNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 417 GDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           GD+     +   +  ++ T   W+ +I A   +G  + A++ F  M +     P+ +T +
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEM-RTGGYEPNEITYI 489

Query: 476 NVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCY 533
           +V+SAC +  L  +GKS  + +     M    +    L+ + GR   +  A + +     
Sbjct: 490 SVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPI 549

Query: 534 NCNLCTWNCMISA 546
             +L  W  +++A
Sbjct: 550 KADLALWGSLLAA 562



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 237/530 (44%), Gaps = 53/530 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK--DVVTWNAMITACVENRCVVMGLH 59
           G  A   ++ +L+ AY    +   +  +F E      DVV+W A+I+A   N CV     
Sbjct: 82  GLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFX 141

Query: 60  FFGEMV-------EEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSS 109
            FG M         E    D  +L  +VSA       NCL++G  VH L +K G    + 
Sbjct: 142 AFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTH 201

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREM-- 165
           L N  V+MY+ C D+  +   F+G+     D VSWN+++SG   N   E+ L  F +M  
Sbjct: 202 LGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVS 261

Query: 166 -GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY--------VSVTNS 216
            G S  + + V++ + + + A LG +     +H       Y  S +        V V  +
Sbjct: 262 EGTSAVEPNRVTVIALLKSCAELGCVETSSWVHE------YISSRHSSLLVAKDVVVLTA 315

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--- 273
           L+ M+++CG++  A   F G+  K+VV W+A+I G+      EEA  L  +M LM     
Sbjct: 316 LLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQM-LMEGNMV 374

Query: 274 ---VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              V+P+  T+V++I+ C+     R    +H YA+   L  D  + ++L+D  +K   + 
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434

Query: 331 KAELLFNAI-APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
               +F+ +      +VSW+SMI              LF EM     + +  T +++L +
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSA 494

Query: 378 CNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           C+    +E GKS  +  +   G S        L+ +    G L  A +++  +   +D +
Sbjct: 495 CSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLA 554

Query: 437 CWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            W  ++ AC  +G+ +   I   K ++   N+    V L N+    G  +
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWD 604



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/350 (19%), Positives = 158/350 (45%), Gaps = 17/350 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-- 68
           T+LL  ++       +  +F     K+VV W+AMI    +  C    L  F +M+ EG  
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 69  ----IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
               ++ ++ TL+ +++A +++   +   ++H  ++  G+  D+ + +  ++M AKCGD+
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 125 NSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
                 FS M       VSW++++     +   ++ L  F EM   G + + ++  S ++
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-D 241
           A +  G +  GK      ++  Y  SP       L+ +  + G ++ A      M  K D
Sbjct: 494 ACSHAGLVEQGKSCFN-SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS----LLLREG 297
           +  W +++    L+G  +     + E +++      +   V L ++  D+     ++R  
Sbjct: 553 LALWGSLLAACHLHGNCK--LGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 298 RSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
             +    +R++ G   + + N +  F ++  S  ++E+++  +  +++ V
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERV 660


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/622 (29%), Positives = 302/622 (48%), Gaps = 89/622 (14%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WNA+I      G  ++      +MQ +  + PD  T   ++  C +   LR G SVH
Sbjct: 92  VFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWL-PDHYTFPFVLKACGEIPSLRHGASVH 150

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI--APMNDLVSWNSMISGL---- 355
                  LG ++ + NS++  Y +  +L  A  +F+ +    + D+VSWNS+++      
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210

Query: 356 -----FKEMLYLCSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                 +    + + +S        TL+ ILP+C S  +L+ GK +H + ++ G  ++  
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVF 270

Query: 405 GVNALMHMYINCGDL----------------------------------VAAFSLLQRIS 430
             NAL+ MY  C  +                                  ++ F ++Q   
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D   W+ VI    Q GH  EA+  F+ M Q     P+ VTL +++S C ++     G
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLSGCASVGALLYG 389

Query: 491 KSLHGLALKSLMGL-------DTRVQNALITMYGRCRDIKSASTVFESC--YNCNLCTWN 541
           K  H   +K+++ L       D  V N LI MY +C+  + A ++F+S    + N+ TW 
Sbjct: 390 KQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWT 449

Query: 542 CMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
            MI  ++Q+     AL+LF  +       +PN  ++   L AC +LG LR G+Q+H +  
Sbjct: 450 VMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYAL 509

Query: 597 HLGFQENS----FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
                EN     ++ + L+DMYS                 ++  +W+S+++ YG HG+G 
Sbjct: 510 R---NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGE 566

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EA+ LF +M   G      + + +L ACSHSG+VD+G+ Y+++M++ + + P  EH+ C+
Sbjct: 567 EALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACM 626

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           VD+LGR+G+L EA E IKN+ ++P   VW A+LSA   H + ++G+  A  L +L  EN 
Sbjct: 627 VDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAEND 686

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
           G Y  LSN+Y    RWKD   I
Sbjct: 687 GSYTLLSNLYANARRWKDVARI 708



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 188/764 (24%), Positives = 320/764 (41%), Gaps = 130/764 (17%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V  WNA+I   V+   +   L F+ +M   G   D  T   ++ A  ++  L+ G  VH 
Sbjct: 92  VFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHA 151

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM---HCADTVSWNTIMSGCLHNNY 154
           +    G+ ++  +CN  V MY +CG L+ +   F  +      D VSWN+I++  +    
Sbjct: 152 IVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQ 211

Query: 155 PEKCLLYFREMG--WSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
               L     MG  +S + + D ++L + + A A +  L +GK +H   ++ G  D  +V
Sbjct: 212 SRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFV 271

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE------------ 259
              N+L+SMY++C  +  A + F G+  KDVVSWNA++ G++  G F+            
Sbjct: 272 G--NALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEE 329

Query: 260 -----------------------EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
                                  EA D+  +MQL   +EP++ T+ +L+S CA    L  
Sbjct: 330 DIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY-GLEPNVVTLASLLSGCASVGALLY 388

Query: 297 GRSVHGYAIRRLLGY-------DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSW 348
           G+  H Y I+ +L         DLL++N L+D Y+K  S   A  +F++I   + ++V+W
Sbjct: 389 GKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTW 448

Query: 349 NSMISG------------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQ 394
             MI G            LF ++    +    +  TL   L +C     L  G+ +H + 
Sbjct: 449 TVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA 508

Query: 395 LKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           L+    +  + V N L+ MY   GD+ AA ++   +   +  S W  ++     +G  +E
Sbjct: 509 LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVS-WTSLMTGYGMHGRGEE 567

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A+  F  M Q+   + D +T + V+ AC          S  G+  + ++     V+   I
Sbjct: 568 ALHLFDQM-QKLGFAVDGITFLVVLYAC----------SHSGMVDQGMIYFHDMVKGFGI 616

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIV 573
           T                         + CM+    +      A+EL +++  EP  +  V
Sbjct: 617 TPGAE--------------------HYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWV 656

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---KSNAAWSSMISAY 630
           ++LSA      +  G+     +  LG  EN    + L ++Y+N    K  A   S++   
Sbjct: 657 ALLSASRIHANIELGEYAASKLTELG-AENDGSYTLLSNLYANARRWKDVARIRSLMKHT 715

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE------E 684
           G   +           C S I+  KS+    +   SH     E  Q YN +L+      +
Sbjct: 716 GIRKR---------PGC-SWIQGKKSTTTFFVGDRSHP----ESEQIYNLLLDLIKRIKD 761

Query: 685 YDVRPETEHHVCIVD-------MLGRSGKLQEAYEFIKNLPIQP 721
               P+T   +  VD       +   S KL  AY  +   P QP
Sbjct: 762 MGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQP 805



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 132/557 (23%), Positives = 243/557 (43%), Gaps = 110/557 (19%)

Query: 273 SVEPDIATVVTLISLCA---DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +  P    +++L+  C    ++ L  +   VHG+           M +  +  Y +  + 
Sbjct: 25  TTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFT---------EMFSYAVGAYIECGAS 75

Query: 330 SKAELLFNAIAPMNDLVSW-NSMIS-----GLFKEML----------YLCSQFSFSTLLA 373
           ++A  L   + P +  V W N++I      GL  + L          +L   ++F     
Sbjct: 76  AEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPF--- 132

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C    SL  G S+H      G  +N    N+++ MY  CG L  A  +   +    
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 434 --DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFE 489
             D   WN ++ A  Q G  + A++    M    +    PD++TLVN++ AC ++     
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           GK +HG ++++ +  D  V NAL++MY +C  +  A+ VFE     ++ +WN M++ +SQ
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312

Query: 550 --------------NKAEVR---------------------ALELFRHLE---FEPNEIS 571
                          + +++                     AL++FR ++    EPN ++
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372

Query: 572 IVSILSACTQLGVLRHGKQIHGHV----FHLGF---QENSFISSALLDMYSNCKSN---- 620
           + S+LS C  +G L +GKQ H +V     +L +   +++  + + L+DMY+ CKS     
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432

Query: 621 -------------AAWSSMISAYGYHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSAC 665
                          W+ MI  Y  HG+  +A++LF ++    + ++P   ++   L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +  G +  G Q     L  Y +R E E  V     C++DM  +SG +  A     N+ ++
Sbjct: 493 ARLGELRLGRQ-----LHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR 547

Query: 721 PKPGVWGAMLSACSHHG 737
                W ++++    HG
Sbjct: 548 NVVS-WTSLMTGYGMHG 563



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 236/532 (44%), Gaps = 64/532 (12%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVE---NRCVVMGLHFFGEMV 65
           S++  Y      + +  +F E   +   D+V+WN+++ A V+   +R  +      G   
Sbjct: 167 SIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHY 226

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
              +R D+ TL+ I+ A   +  L+ G+ VH  S++ G++ D  + N  V+MYAKC  +N
Sbjct: 227 SLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMN 286

Query: 126 SSECTFSGMHCADTVSWNTIMSG------------------------------CLHNNYP 155
            +   F G+   D VSWN +++G                               +   Y 
Sbjct: 287 EANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYA 346

Query: 156 EK-----CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK----LGYE 206
           +K      L  FR+M   G + + V+L+S ++  A +G L YGK  HA  IK    L + 
Sbjct: 347 QKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWN 406

Query: 207 DSP-YVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALNGKFEEAFD 263
           D    + V N LI MY++C     A   F  +  KD  VV+W  +I G+A +G+  +A  
Sbjct: 407 DKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALK 466

Query: 264 LLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM-NSLMD 321
           L  ++ +   S++P+  T+   +  CA    LR GR +H YA+R     ++L + N L+D
Sbjct: 467 LFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLID 526

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
            YSKS  +  A  +F+ +  + ++VSW S+++G            LF +M  L       
Sbjct: 527 MYSKSGDIDAARAVFDNM-KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGI 585

Query: 370 TLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           T L +L +C+    ++ G    H      G +        ++ +    G L  A  L++ 
Sbjct: 586 TFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKN 645

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +S       W  ++ A   + + +        +T+    +  S TL++ + A
Sbjct: 646 MSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYA 697


>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/582 (31%), Positives = 304/582 (52%), Gaps = 45/582 (7%)

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            L++ YS  G +E A + F  +     V  NA+++G+  N ++ +  +LL  M     +E
Sbjct: 94  KLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCH-LE 152

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D  T    +  C   L    G  V G A+ + L     + +S+++F          E L
Sbjct: 153 FDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFL---------EGL 203

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           F           +N     LF +MLY   + S  T+++++ SC    +L FGK +H + L
Sbjct: 204 FRE--------GYN-----LFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 250

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             G S +T  +  L+ MY   GD+ +A  + + +   +  S WN++I    QNG   E +
Sbjct: 251 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVS-WNVMISGYVQNGLLVETL 309

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + F+ +    +   DS T+V++I  C        GK LHG   +  + L+  +  A++ +
Sbjct: 310 RLFQKLIMD-DVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDL 368

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISI 572
           Y +C  +  AS+VFE   N N+ +W  M+   +QN     AL+LF  ++ E    N +++
Sbjct: 369 YAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTL 428

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-KSNAA--------- 622
           VS++  CT LG+LR G+ +H  +    F     + +AL+DMY+ C K N+A         
Sbjct: 429 VSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLT 488

Query: 623 ------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
                 ++SMIS YG HG G +A+ ++H M   G++P +S+ +SLLSACSHSGLV+EG+ 
Sbjct: 489 PKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIA 548

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
            + NM+++++  P  + + CIVD+L R+G+L++A E I  +P  P  G+   +L+ C  H
Sbjct: 549 LFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLH 608

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            D ++G ++A+ L  LE  N   YI+LSN+Y    RW D+V+
Sbjct: 609 KDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRW-DSVK 649



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 211/438 (48%), Gaps = 23/438 (5%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           G + F +M+   I   + T++ ++ +  +M  L  G+ +H   +  GM  D+ +    ++
Sbjct: 207 GYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLID 266

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY K GD+ S+   F  M   + VSWN ++SG + N    + L  F+++       D+ +
Sbjct: 267 MYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGT 326

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + S +   +   +L  GK++H    + G + +  + +  +++ +Y++CG +  A   F  
Sbjct: 327 VVSLIQLCSRTADLDGGKILHGFIYRRGLDLN--LVLPTAIVDLYAKCGSLAYASSVFER 384

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  K+V+SW A++ G A NG   +A  L  +MQ  R V  +  T+V+L+  C    LLRE
Sbjct: 385 MKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNER-VTFNALTLVSLVYCCTLLGLLRE 443

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GRSVH    R     ++++M +L+D Y+K + ++ AE++F       D++ +NSMISG  
Sbjct: 444 GRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYG 503

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     ++  M     Q + ST +++L +C+    +E G ++    +K    +NT 
Sbjct: 504 MHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVK---DHNTT 560

Query: 405 GVNAL----MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
             + L    + +    G L  A  L+ ++     +     ++  C  +   +  +K    
Sbjct: 561 PTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADR 620

Query: 461 MTQQQNASPD-SVTLVNV 477
           +   ++ +P   +TL N+
Sbjct: 621 LLSLESRNPSIYITLSNI 638



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 170/332 (51%), Gaps = 7/332 (2%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y      ES+  +F    ++++V+WN MI+  V+N  +V  L  F +++ + + 
Sbjct: 262 TTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVG 321

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FDS T++ ++   ++   L  G+++H    + G+  +  L    V++YAKCG L  +   
Sbjct: 322 FDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSV 381

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + +SW  ++ G   N +    L  F +M       + ++L S V     LG L
Sbjct: 382 FERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLL 441

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAII 249
             G+ +HA   +  +     V V  +LI MY++C  I +AE  F +G+T KDV+ +N++I
Sbjct: 442 REGRSVHATLTRFHFASE--VVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 499

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR--R 307
            G+ ++G   +A  + H M     ++P+ +T V+L+S C+ S L+ EG ++    ++   
Sbjct: 500 SGYGMHGLGHKALCVYHRMN-REGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHN 558

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
               D L    ++D  S++  L +AE L N +
Sbjct: 559 TTPTDKLYA-CIVDLLSRAGRLRQAEELINQM 589



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 140/317 (44%), Gaps = 9/317 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +L   T+++  Y+       + ++F    NK+V++W AM+    +N      L  
Sbjct: 353 RGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKL 412

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  E + F++ TL+ +V   T +  L++GR VH    +    ++  +    ++MYAK
Sbjct: 413 FDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAK 472

Query: 121 CGDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           C  +NS+E  F  G+   D + +N+++SG   +    K L  +  M   G Q +  +  S
Sbjct: 473 CSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVS 532

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A +  G +  G  +    +K  +  +P   +   ++ + S+ G +  AE     M  
Sbjct: 533 LLSACSHSGLVEEGIALFQNMVK-DHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPF 591

Query: 240 KDVVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
                    +++G  L+   E    L   +  + S  P I   +TL ++ A +      +
Sbjct: 592 TPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSI--YITLSNIYAKASRWDSVK 649

Query: 299 SVHGY----AIRRLLGY 311
            V G      I+++ GY
Sbjct: 650 YVRGLMMEQEIKKIPGY 666


>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
 gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 207/741 (27%), Positives = 370/741 (49%), Gaps = 65/741 (8%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T +  LK+   +H   +  G+  D  L +  +  YA  G L  +   F G    D   WN
Sbjct: 57  TDVRSLKK---LHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFLNDDLAQWN 113

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           +++       YPE+ +L +R +       D  +++  + +   L  L  GK +HA  +KL
Sbjct: 114 SVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKGMHADSLKL 173

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE--A 261
           G     +V   +SL+ +YS+   +  +++AF  +  KD+VS+ ++I G++ N       A
Sbjct: 174 GLNRDKFVG--SSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNA 231

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMMNSLM 320
           F++  +M    ++E +  T+V+L+ +  +   +REG+SVH Y+ RR +G  D ++  SL+
Sbjct: 232 FEIASDMS-QSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDEVLGTSLV 290

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLV----SWNSMISGLFKEMLYLCSQFSFSTLL---A 373
             Y +  +   A       A + +LV    SWN+M++GL +      +   FS +L    
Sbjct: 291 HMYMQCGAYQLAS------ASLKNLVQSVASWNAMLAGLVRTGQSGNAIHHFSVMLHEHK 344

Query: 374 ILPS--------------CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           ++P               CNS     +  S+H + ++     + +   AL+ +Y+ C  +
Sbjct: 345 VVPDSVTYANLISACAELCNSG----YAASVHAYLIRRSIPLDVVLATALIEVYMKCTRI 400

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
           +++  L  ++    D   +N +I    QNG   EAI   K M  +  A P+ VT++++++
Sbjct: 401 MSSKHLFDQLV-VKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVA-PNFVTILSLLA 458

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           A  + +    G+ +HG +++     +  + N +I MY  C  I SA T+F S    NL +
Sbjct: 459 AIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLIS 518

Query: 540 WNCMISA--FSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHG 593
           W  M+    F  +  E   +ELF+ L  +    P+ +++++ + A ++LG L+  KQIH 
Sbjct: 519 WTVMMMGCLFCGHGGET--VELFQLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHC 576

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
            V+    ++++   ++L+  Y+ C               +   +W+SMISAYG HG   +
Sbjct: 577 FVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTK 636

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
            +E+F  M    I P   +  S+LSACSH+GL+ EGL  + +M   Y V P+ EH+ CIV
Sbjct: 637 VLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSIYSVLPQEEHYGCIV 696

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+L R+G L+E Y+ IK   +  K  V  A+LSAC  +G+T +G+ ++  L +L  +N G
Sbjct: 697 DLLSRAGHLEEGYKLIKLSTLNDKSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPG 756

Query: 759 YYISLSNMYVALGRWKDAVEI 779
            Y  +S ++   G+W  +  I
Sbjct: 757 TYALISEVFAQKGQWNKSANI 777



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 333/714 (46%), Gaps = 43/714 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + +L  Y+++     +   F+   N D+  WN++I            +  +  +    I 
Sbjct: 82  SEILICYASLGVLCKTRLCFHGFLNDDLAQWNSVIVDIFRAGYPEEAILLYRGLKLRQIG 141

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T+   + + T++  L  G+ +H  S+K G+  D  + +  V +Y+K   +  S+  
Sbjct: 142 LDEKTVTFGLKSCTELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKA 201

Query: 131 FSGMHCADTVSWNTIMSGCLHN--NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  +   D VS+ ++++G   N  +          +M  S  + + V+L S +  +  LG
Sbjct: 202 FEEILDKDIVSYTSMITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLG 261

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  GK +H    + G   S  V +  SL+ MY QCG  + A  +   +  + V SWNA+
Sbjct: 262 AIREGKSVHCYSTRRGIGVSDEV-LGTSLVHMYMQCGAYQLASASLKNLV-QSVASWNAM 319

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           + G    G+   A      M     V PD  T   LIS CA+        SVH Y IRR 
Sbjct: 320 LAGLVRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLISACAELCNSGYAASVHAYLIRRS 379

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           +  D+++  +L++ Y K   +  ++ LF+ +  + DLVS+N+MI G            L 
Sbjct: 380 IPLDVVLATALIEVYMKCTRIMSSKHLFDQLV-VKDLVSYNTMIYGYLQNGMVNEAIALL 438

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           KEM+  C   +F T+L++L +    +    G+ IH + ++ GF +N    N ++ MY  C
Sbjct: 439 KEMVAECVAPNFVTILSLLAAIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGC 498

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G + +A ++   +   +  S W ++++ C   GH  E ++ F+ + QQ    PDSVT++ 
Sbjct: 499 GKITSARTIFASLEKKNLIS-WTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTVMT 557

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
            I A   L      K +H    ++L+  DT+  N+LIT Y +C  +  +  +F S  + +
Sbjct: 558 AIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLSLEHRD 617

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHG 593
           L +WN MISA+  +    + LE+F+ +E     P+ ++  S+LSAC+  G+++ G  I  
Sbjct: 618 LDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEGLHI-- 675

Query: 594 HVFHLGFQENSFISSAL-LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
                 FQ  + I S L  + +  C  +     ++S  G+  +G++ I+L      S + 
Sbjct: 676 ------FQSMTSIYSVLPQEEHYGCIVD-----LLSRAGHLEEGYKLIKL------STLN 718

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
              S + +LLSAC   G    G    N +LE     P T  +  I ++  + G+
Sbjct: 719 DKSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPGT--YALISEVFAQKGQ 770



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 150/292 (51%), Gaps = 10/292 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y   +   SS  LF +   KD+V++N MI   ++N  V   +    EMV E +
Sbjct: 387 ATALIEVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECV 446

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  T+L +++A+       +GR +H  SI+ G  ++  + N  + MY+ CG + S+  
Sbjct: 447 APNFVTILSLLAAIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSART 506

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNY-PEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
            F+ +   + +SW  +M GCL   +  E   L+   M   G + D+V++ +A+ A + LG
Sbjct: 507 IFASLEKKNLISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELG 566

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L   K IH    +   E        NSLI+ Y++CG ++ +   F  +  +D+ SWN++
Sbjct: 567 HLKGVKQIHCFVYRALLEKDT--KTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSM 624

Query: 249 IDGFALNG---KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           I  + ++G   K  E F L+ E     ++ PD  T  +++S C+ + L++EG
Sbjct: 625 ISAYGMHGFYTKVLEMFKLMEE----GNINPDGLTFSSVLSACSHAGLIKEG 672



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 1/193 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  +  ++  YS      S+  +F     K++++W  M+  C+        +  F
Sbjct: 480 GFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFCGHGGETVELF 539

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             ++++ G + DS T++  + A++++  LK  + +HC   +A +  D+   N  +  YAK
Sbjct: 540 QLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAK 599

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ S   F  +   D  SWN+++S    + +  K L  F+ M       D ++ SS 
Sbjct: 600 CGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSV 659

Query: 181 VAASACLGELSYG 193
           ++A +  G +  G
Sbjct: 660 LSACSHAGLIKEG 672


>gi|115446475|ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
 gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza sativa Japonica Group]
 gi|125582364|gb|EAZ23295.1| hypothetical protein OsJ_06992 [Oryza sativa Japonica Group]
 gi|215696993|dbj|BAG90987.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 787

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 211/743 (28%), Positives = 351/743 (47%), Gaps = 43/743 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++ +V W  +++    +      L     MVE  +R D+    + + A      L  GR 
Sbjct: 66  DRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQ 125

Query: 95  VHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           VH  + K G + AD  + N  V MYA C  L  +E  FSG+   D+VSW +++S    N 
Sbjct: 126 VHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENG 185

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
              + L+ F EM   G   D  +LS A+ A++ LG +  G  +H   IK G+  S ++  
Sbjct: 186 CDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLE- 244

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-R 272
            N LI  Y +C +++  ++ F  M  KD+VSWN +I  +A N   EEA  L+H   LM +
Sbjct: 245 -NCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEA--LVHFRDLMYK 301

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
             E D  T+ +++ +         GR +HGY IR  L  D  +M++LMD Y    +L K+
Sbjct: 302 CAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVMSALMDMYVNWATLRKS 361

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
                ++ P+  L  + S + G   + +   S          L SC S   L  G+ +H 
Sbjct: 362 R----SMLPLRMLKYYLS-VQGKLDQFIVASS----------LKSCASDLDLAAGRMLHA 406

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             LK   + +   +++L+ MY  CG L  A  L  R + +  T  W+ +I     NG F+
Sbjct: 407 CVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSR-TKDPCTVAWSAIISGSCLNGQFE 465

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
            AI  F++M Q ++  P+  T  +V++AC  L     G  +H  ++++  G    V  +L
Sbjct: 466 RAIHLFRTM-QLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSL 524

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISI 572
           I+ Y R      A  +  S  N  + +W  +   F++    +  L LF  ++     +  
Sbjct: 525 ISFYLREGQFNQALRLCLSLSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDY 583

Query: 573 VS---ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            +   ILS+C +   L  G Q H ++   G      +   L+DMYS C            
Sbjct: 584 PTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRN 643

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +++++W+S+I A   +G    AI LF +M      P   + +S+L AC+  GLV+E 
Sbjct: 644 TSGRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEA 703

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN-LPIQPKPGVWGAMLSAC 733
            Q++ +M E Y ++P  EH+  ++++LGR+G  +EA  FI + +P +     W  + SA 
Sbjct: 704 FQFFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFIDSVVPSESGASAWSLLCSAA 763

Query: 734 SHHGDTKMGKQVAELLFKLEPEN 756
             +G+ K  +  A+ L KL P+ 
Sbjct: 764 KQNGNAKTMRLAADRLSKLTPDG 786



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 157/651 (24%), Positives = 272/651 (41%), Gaps = 65/651 (9%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A L  +  L+T Y++      +  +F      D V+W +M++A  EN C    L  F EM
Sbjct: 138 ADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEM 197

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +  G+  D+ TL + + A + +  ++ G  +HC  IK+G +    L N  +  Y +C +L
Sbjct: 198 IHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCREL 257

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
              +  F  M+  D VSWN ++     N   E+ L++FR++ +   + D  +L S +   
Sbjct: 258 QLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVI 317

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                  YG+ IH   I+ G +   Y  V ++L+ MY     +  +         K  +S
Sbjct: 318 TRRCAFDYGREIHGYLIRAGLDSDKY--VMSALMDMYVNWATLRKSRSMLPLRMLKYYLS 375

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
               +D F                            V + +  CA  L L  GR +H   
Sbjct: 376 VQGKLDQF---------------------------IVASSLKSCASDLDLAAGRMLHACV 408

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG--------- 354
           ++  +  D  +++SL+D Y+K  SL +A +LF+    P    V+W+++ISG         
Sbjct: 409 LKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSRTKDPCT--VAWSAIISGSCLNGQFER 466

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF+ M     Q +  T  ++L +C +   +  G  IH   ++ G+  +   + +L+ 
Sbjct: 467 AIHLFRTMQLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLIS 526

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y+  G    A  L   +S NS+ S W  +     + G     +  F  + Q+     D 
Sbjct: 527 FYLREGQFNQALRLCLSLS-NSEIS-WGTLFQEFAELGDHLGILNLFH-VIQRSGGVLDY 583

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T   ++S+CG      EG   H   +K  +     + + LI MY  C  +  A   F +
Sbjct: 584 PTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRN 643

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               N  +W  +I A  +N     A+ LF  +   E  PN ++ +S+L AC ++G++   
Sbjct: 644 TSGRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEA 703

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
            Q              F+S  + ++Y    S   +S MI   G  G   EA
Sbjct: 704 FQF-------------FVS--MTEVYKIQPSEEHYSHMIEVLGRAGMFKEA 739



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 225/501 (44%), Gaps = 45/501 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+        L+  Y      +    +F E   KD+V+WN +I    +N C    L  F
Sbjct: 236 GFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADNLCDEEALVHF 295

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++ +    D  TL  I+  +T+      GR +H   I+AG+ +D  + +  ++MY   
Sbjct: 296 RDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVMSALMDMY--- 352

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
                             V+W T+      +  P + L Y+  +     + D   ++S++
Sbjct: 353 ------------------VNWATLRKS--RSMLPLRMLKYYLSV---QGKLDQFIVASSL 389

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A   +L+ G+++HA  +K      P+  V +SL+ MY++CG +E A   F       
Sbjct: 390 KSCASDLDLAAGRMLHACVLKFDVNPDPF--VISSLVDMYAKCGSLEEAHILFSRTKDPC 447

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+W+AII G  LNG+FE A  L   MQL   V+P+  T  ++++ C     +  G  +H
Sbjct: 448 TVAWSAIISGSCLNGQFERAIHLFRTMQL-EHVQPNEFTYTSVLTACMALGDVVSGMEIH 506

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM---------- 351
             +IR   G    ++ SL+ FY +    ++A  L  +++  N  +SW ++          
Sbjct: 507 SNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLS--NSEISWGTLFQEFAELGDH 564

Query: 352 --ISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             I  LF  +        + T   IL SC     L  G   H + +K G S+     + L
Sbjct: 565 LGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYL 624

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  AF   +  S   ++S W  +I+A  +NG  + AI+ F  M +++  SP
Sbjct: 625 IDMYSGCGSLTHAFEAFRNTS-GRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEK-SP 682

Query: 470 DSVTLVNVISACGNLELAFEG 490
           +S+  ++V+ AC  + L  E 
Sbjct: 683 NSLAFLSVLKACAEIGLVNEA 703


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 269/529 (50%), Gaps = 69/529 (13%)

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------CSQ 365
            +  YS S  L +A  LF+ I P  DL +W  +IS L K    L             C +
Sbjct: 17  FIKVYSNSGDLQRARHLFDKI-PQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
                LL++  +C S   +   K +H   ++ GF ++ +  NAL+ MY  C     A  +
Sbjct: 76  PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            + +    D   W  +       G  +EA+  F+ M       P+SVT+ +++ AC +L+
Sbjct: 136 FEGMPFR-DVISWTSMASCYVNCGLLREALGAFRKMGLN-GERPNSVTVSSILPACTDLK 193

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G+ +HG  +++ MG +  V +AL+ MY  C  I+ A  VF+S    +  +WN +I+
Sbjct: 194 DLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLIT 253

Query: 546 AF-----------------------------------SQNKAEVRALELFRHLE---FEP 567
           A+                                    QN    +ALE+   ++   F+P
Sbjct: 254 AYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKP 313

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           N+I+I S+L ACT L  LR GKQIHG++F   F ++   ++AL+ MY+ C          
Sbjct: 314 NQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVF 373

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                +   +W++MI A   HG G EA+ LF EM +SG+RP   +   +LS CSHS LVD
Sbjct: 374 SMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVD 433

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EGL  +++M  ++ V P+ +HH C+VD+L R+G+L+EAYEFIK +PI+P  G WGA+L  
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           C  + + ++G+  A  LF++E +N G Y+ LSN+ V+   W +A E  K
Sbjct: 494 CRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRK 542



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 242/576 (42%), Gaps = 78/576 (13%)

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           KL     P++++    I +YS  GD++ A   F  +   D+ +W  +I     +G+  EA
Sbjct: 4   KLPTSLPPHLAL--KFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEA 61

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
               ++ +    VEPD   ++++   CA    +   + VH  AIR     D+L+ N+L+D
Sbjct: 62  IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS------- 369
            Y K      A L+F  + P  D++SW SM S     GL +E L    +   +       
Sbjct: 122 MYGKCRCSEGARLVFEGM-PFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSV 180

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T+ +ILP+C   + L+ G+ +H + ++ G   N    +AL++MY +C  +  A  +   +
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240

Query: 430 SHNSDTSCWNIVIVA-----------------------------------CTQNGHFQEA 454
           S   DT  WN++I A                                   C QNG  ++A
Sbjct: 241 SRR-DTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKA 299

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           ++    M Q     P+ +T+ +V+ AC NLE    GK +HG   +     D     AL+ 
Sbjct: 300 LEVLSRM-QNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVF 358

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEIS 571
           MY +C D++ +  VF      +  +WN MI A S +     AL LFR +      PN ++
Sbjct: 359 MYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVT 418

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG 631
              +LS C+   ++  G  I        F   S   S   D   +       S M+    
Sbjct: 419 FTGVLSGCSHSRLVDEGLLI--------FDSMSRDHSVEPDADHH-------SCMVDVLS 463

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
             G+  EA E   +M    I PT  +  +LL  C     V+ G    N + E     P  
Sbjct: 464 RAGRLEEAYEFIKKM---PIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNP-- 518

Query: 692 EHHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPG 724
            ++V + ++L  +    EA E    +++  +   PG
Sbjct: 519 GNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPG 554



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 54/425 (12%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQA 172
           F+ +Y+  GDL  +   F  +   D  +W  ++S    +    + + Y+ +       + 
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D + L S   A A L ++   K +H   I+ G+     V + N+LI MY +C   E A  
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGF--CSDVLLGNALIDMYGKCRCSEGARL 134

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F GM  +DV+SW ++   +   G   EA     +M L     P+  TV +++  C D  
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGL-NGERPNSVTVSSILPACTDLK 193

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L+ GR VHG+ +R  +G ++ + ++L++ Y+   S+ +A+L+F++++   D VSWN +I
Sbjct: 194 DLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMS-RRDTVSWNVLI 252

Query: 353 SGLF----------------------------------------KEMLYLCSQFSFS--- 369
           +  F                                        ++ L + S+   S   
Sbjct: 253 TAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFK 312

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               T+ ++LP+C + ESL  GK IH +  +  F  +     AL+ MY  CGDL  +  +
Sbjct: 313 PNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRV 372

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              ++   DT  WN +I+A + +G+ +EA+  F+ M       P+SVT   V+S C +  
Sbjct: 373 FSMMT-KRDTVSWNTMIIATSMHGNGEEALLLFREMV-DSGVRPNSVTFTGVLSGCSHSR 430

Query: 486 LAFEG 490
           L  EG
Sbjct: 431 LVDEG 435



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 196/438 (44%), Gaps = 58/438 (13%)

Query: 4   LAHLPTST------SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG 57
           L+ LPTS         +  YSN    + +  LF +    D+ TW  +I+A  ++   +  
Sbjct: 2   LSKLPTSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEA 61

Query: 58  LHFFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           + ++ +   +  +  D   LL +  A   +  +   + VH  +I+ G  +D  L N  ++
Sbjct: 62  IQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALID 121

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY KC     +   F GM   D +SW ++ S  ++     + L  FR+MG +GE+ ++V+
Sbjct: 122 MYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVT 181

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           +SS + A   L +L  G+ +H   ++ G   + +VS  ++L++MY+ C  I  A+  F  
Sbjct: 182 VSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS--SALVNMYASCLSIRQAQLVFDS 239

Query: 237 MTCKDVV-----------------------------------SWNAIIDGFALNGKFEEA 261
           M+ +D V                                   SWNA+I G   NG+ E+A
Sbjct: 240 MSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKA 299

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
            ++L  MQ     +P+  T+ +++  C +   LR G+ +HGY  R     DL    +L+ 
Sbjct: 300 LEVLSRMQ-NSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVF 358

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
            Y+K   L  +  +F+ +    D VSWN+MI              LF+EM+    + +  
Sbjct: 359 MYAKCGDLELSRRVFSMMTK-RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSV 417

Query: 370 TLLAILPSCNSPESLEFG 387
           T   +L  C+    ++ G
Sbjct: 418 TFTGVLSGCSHSRLVDEG 435



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 41/390 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+  Y      E +  +F     +DV++W +M +  V    +   L  F
Sbjct: 108 GFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAF 167

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G R +S T+  I+ A T +  LK GR VH   ++ GM  +  + +  VNMYA C
Sbjct: 168 RKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASC 227

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMS---------------------------------- 147
             +  ++  F  M   DTVSWN +++                                  
Sbjct: 228 LSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVI 287

Query: 148 -GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK-LGY 205
            GC+ N   EK L     M  SG + + ++++S + A   L  L  GK IH    +   +
Sbjct: 288 GGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFF 347

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           +D   ++ T +L+ MY++CGD+E + R F  MT +D VSWN +I   +++G  EEA  L 
Sbjct: 348 QD---LTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLF 404

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYS 324
            EM +   V P+  T   ++S C+ S L+ EG  +     R   +  D    + ++D  S
Sbjct: 405 REM-VDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLS 463

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           ++  L +A      +       +W +++ G
Sbjct: 464 RAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493


>gi|255541017|ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550688|gb|EEF52175.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 954

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 200/750 (26%), Positives = 360/750 (48%), Gaps = 50/750 (6%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F ++   + SLL  Y        +L +F    NK+V++WN +I+    N        FF 
Sbjct: 81  FNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFS 140

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   G   +  T   ++SA   +     G  V+ L+ K G  ++  +    +++ A+ G
Sbjct: 141 MMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNG 200

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
               +   F  + C + V WN+I+SG + +      L  F +M       ++ + SS + 
Sbjct: 201 RFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILT 260

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L E+  GK I    IK   +D   + V  ++++MY++CGDI  A + F  M  ++V
Sbjct: 261 ACASLEEVELGKGIQGWVIKCCAKD---IFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNV 317

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSW AI+ GF        A     EM+ M+  E +  TV T+IS CA    ++E   +H 
Sbjct: 318 VSWTAIVSGFIKRDDSISALKFFKEMRKMKE-ETNKFTVTTVISACAKPHFIKEAIQIHC 376

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM--- 359
           + ++     D ++  +L++ Y+K +++S +E++F  +  + +   W  MIS   K     
Sbjct: 377 WILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQ 436

Query: 360 ------------LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                            +F  S++L+++      +SL  G+ IHC+ LK GF  +    +
Sbjct: 437 SAIDLLLKLLQQGLRPDKFCLSSVLSVI------DSLYLGREIHCYILKTGFVLDLSVGS 490

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L  MY  CG +  ++ + ++I    + S W  +I   T++GH  +A +  + M  ++ +
Sbjct: 491 SLFTMYSKCGSIGDSYKVFEQIPVKDNIS-WTSMISGFTEHGHAYQAFELLRKMLTER-S 548

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD  T   ++SA  ++    +GK +HG A ++ +G +  V  AL+ MY +C  ++SA  
Sbjct: 549 KPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARK 608

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           +F+     +  + + ++S ++QN     AL LF  +    F  +  ++ S+L A   L  
Sbjct: 609 MFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNR 668

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISA 629
           L  G Q+H H+  LG   +  + S+L+ +YS C S                 +W++MI++
Sbjct: 669 LDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIAS 728

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
              HGKG EA++++ +M   GIRP   + + +LSACSH+ LV+EG  ++N+M +++ + P
Sbjct: 729 CAQHGKGVEALKIYEQMRREGIRPDSVTFVGVLSACSHANLVEEGYFHFNSMTKDFGLEP 788

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
                 C      RS       E +K + I
Sbjct: 789 NNLDCAC-----RRSEAHNSTKEIVKGIHI 813



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 171/603 (28%), Positives = 293/603 (48%), Gaps = 26/603 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++      ++   +    F  +L +FY+   ++VV WN++I+  V++    + L  F
Sbjct: 181 GFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIF 240

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    +  +S T   I++A   +  ++ G+ +    IK     D  +    VNMYAKC
Sbjct: 241 YQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKC-CAKDIFVGTAIVNMYAKC 299

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD+  +   FS M   + VSW  I+SG +  +     L +F+EM    E+ +  ++++ +
Sbjct: 300 GDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVI 359

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
           +A A    +     IH   +K GY   P V    +LI+MY++   I ++E  F  M   K
Sbjct: 360 SACAKPHFIKEAIQIHCWILKTGYYLDPVVGA--ALINMYAKLHAISSSEMVFREMEGVK 417

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +   W  +I  FA N   + A DLL    L + + PD   + +++S+  DSL L  GR +
Sbjct: 418 NPGIWTIMISSFAKNQDSQSAIDLL-LKLLQQGLRPDKFCLSSVLSVI-DSLYL--GREI 473

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y ++     DL + +SL   YSK  S+  +  +F  I P+ D +SW SMISG      
Sbjct: 474 HCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQI-PVKDNISWTSMISGFTEHGH 532

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 L ++ML   S+   +T  AIL + +S  SL+ GK IH +  +    +  +   A
Sbjct: 533 AYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGA 592

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG L +A  +   ++     SC ++V     QNG  +EA+  F  M    N +
Sbjct: 593 LVNMYSKCGALESARKMFDLLAVKDQVSCSSLV-SGYAQNGWLEEALLLFHEML-ISNFT 650

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            DS  + +V+ A   L     G  LH   +K  +  D  V ++L+T+Y +C  I+     
Sbjct: 651 IDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKA 710

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F    + +L +W  MI++ +Q+   V AL+++  +  E   P+ ++ V +LSAC+   ++
Sbjct: 711 FNQIDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGIRPDSVTFVGVLSACSHANLV 770

Query: 586 RHG 588
             G
Sbjct: 771 EEG 773



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 228/495 (46%), Gaps = 44/495 (8%)

Query: 294 LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           + E + +H + I+  L   + ++ NSL+D+Y KS +L  A  +F+ I P  +++SWN +I
Sbjct: 65  VEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTI-PNKNVISWNVII 123

Query: 353 SG-----LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           SG     LF++     S   FS       T   +L +C + E+   G+ ++    K GF 
Sbjct: 124 SGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFY 183

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           +N      ++ +    G    A  +   +S   +  CWN +I    ++G +  A+  F  
Sbjct: 184 SNGHVRAGMIDLLARNGRFGDALRVFYDVS-CENVVCWNSIISGAVKSGEYWIALDIFYQ 242

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M+ ++   P+S T  ++++AC +LE    GK + G  +K     D  V  A++ MY +C 
Sbjct: 243 MS-RRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCC-AKDIFVGTAIVNMYAKCG 300

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILS 577
           DI  A   F      N+ +W  ++S F +    + AL+ F   R ++ E N+ ++ +++S
Sbjct: 301 DIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVIS 360

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN----------------CKSNA 621
           AC +   ++   QIH  +   G+  +  + +AL++MY+                  K+  
Sbjct: 361 ACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPG 420

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            W+ MIS++  +     AI+L  ++   G+RP K  + S+LS      L  E   Y    
Sbjct: 421 IWTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVIDSLYLGREIHCYILKT 480

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
               D+   +     +  M  + G + ++Y+  + +P++     W +M+S  + HG    
Sbjct: 481 GFVLDLSVGSS----LFTMYSKCGSIGDSYKVFEQIPVKDNIS-WTSMISGFTEHGH--- 532

Query: 742 GKQVAELLFKLEPEN 756
             Q  ELL K+  E 
Sbjct: 533 AYQAFELLRKMLTER 547


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 281/535 (52%), Gaps = 41/535 (7%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T+ +L+  C+ +  LR G S+H   ++     D+ M N +++ Y+K    + A  +F+ +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              N LVSW++MISG            L+ +M  + +++ F++   ++ +C S  ++  G
Sbjct: 65  FEKN-LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFAS---VISACASLSAVTLG 120

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC--WNIVIVAC 445
           + IH   LK G+ + +   N+L+ MY+ C     A S+    ++  + +C  +N +I   
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVF---TNTPEPNCVSYNALITGF 177

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            +N   +  ++ FK M +QQ   PD    + V+  C   E    G  LH   +K  +   
Sbjct: 178 VENQQLERGLEFFKLM-RQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST 236

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
             + N +ITMY     I+ A   F      ++ +WN +I+A S      + L +F+H+  
Sbjct: 237 PFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE 296

Query: 566 E----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
           E    P++ +  S L+AC  L  + HGKQIH H+      ++  + +AL++MY+ C    
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                       +  +W+++I+ +G HG G  A+ELF +M  SGIRP   + I LL+AC+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H+GLVD+G  Y+N+M E Y + P+ EH  C++DMLGR+G+L EA E+++  P    P V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++LSA   HGD  +G+++A+ L KL+P     Y+ LSN+Y + G W    E  K
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARK 531



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 243/538 (45%), Gaps = 64/538 (11%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TL  ++   ++   L+ G  +H   +K G  +D  + N  +NMYAKCG    +   F 
Sbjct: 3   TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW+ ++SG      P+  +  + +M       +    +S ++A A L  ++ 
Sbjct: 63  EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTL 119

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH+  +K GYE   +VS  NSLISMY +C     A   F      + VS+NA+I GF
Sbjct: 120 GQKIHSRSLKFGYESISFVS--NSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             N + E   +    M+  + + PD    + ++ +C  +  L+ G  +H   ++  L   
Sbjct: 178 VENQQLERGLEFFKLMR-QQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST 236

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             + N ++  YS+ N + +AE  F  I    D++SWN++I+             +FK M 
Sbjct: 237 PFIGNVIITMYSELNLIQEAEKAFRLIEE-KDVISWNTLIAACSHCDDHAKGLRVFKHMT 295

Query: 361 ----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                    F+F++ LA   +C    S+  GK IH   ++     +    NAL++MY  C
Sbjct: 296 EETNVRPDDFTFTSALA---ACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKC 352

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS---PDSVT 473
           G +  A+ +  ++ H++  S WN +I     +G  + A++ F    +Q NAS   PDSVT
Sbjct: 353 GCIGYAYDIFSKMVHHNLVS-WNTIIAGFGNHGLGERAVELF----EQMNASGIRPDSVT 407

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + +++AC +  L  +G+                  N++   YG   DI+          
Sbjct: 408 FIGLLTACNHAGLVDKGQLYF---------------NSMEETYGIAPDIEH--------- 443

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
                 ++C+I    +      A E  R   F  + + +VS+LSA    G +  G+++
Sbjct: 444 ------FSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERL 495



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 192/376 (51%), Gaps = 9/376 (2%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S SL++ Y   +    +L++F  T   + V++NA+IT  VEN+ +  GL FF  M ++G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D    + ++   T    LK+G  +HC ++K  + +   + NV + MY++   +  +E 
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLG 188
            F  +   D +SWNT+++ C H +   K L  F+ M   +  + D+ + +SA+AA A L 
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 189 ELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +S+GK IHA  ++   Y+D   + V N+L++MY++CG I  A   F  M   ++VSWN 
Sbjct: 319 SMSHGKQIHAHLMRTRLYQD---LGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II GF  +G  E A +L  +M     + PD  T + L++ C  + L+ +G+ ++  ++  
Sbjct: 376 IIAGFGNHGLGERAVELFEQMN-ASGIRPDSVTFIGLLTACNHAGLVDKGQ-LYFNSMEE 433

Query: 308 LLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
             G   D+   + L+D   ++  L++AE         ND V   S++S        +  +
Sbjct: 434 TYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGE 493

Query: 366 FSFSTLLAILPSCNSP 381
                LL + P   SP
Sbjct: 494 RLAKWLLKLQPVTTSP 509



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 186/393 (47%), Gaps = 22/393 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEE 67
           S  +L  Y+   +   +  +F E   K++V+W+AMI+   +     M +  + +M  V  
Sbjct: 41  SNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPN 100

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
              F S     ++SA   ++ +  G+ +H  S+K G  + S + N  ++MY KC   + +
Sbjct: 101 EYVFAS-----VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDA 155

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F+     + VS+N +++G + N   E+ L +F+ M   G   D  +    +      
Sbjct: 156 LSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTT 215

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  G  +H   +KL  + +P++   N +I+MYS+   I+ AE+AF  +  KDV+SWN 
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIG--NVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   +      +   +   M    +V PD  T  + ++ CA    +  G+ +H + +R 
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  DL + N+L++ Y+K   +  A  +F+ +   N LVSWN++I+G            L
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN-LVSWNTIIAGFGNHGLGERAVEL 392

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
           F++M     +    T + +L +CN    ++ G+
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 192/631 (30%), Positives = 319/631 (50%), Gaps = 53/631 (8%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           GELS  + +        +E  P+ +   TN +IS Y + G++  A + F GM  +  V+W
Sbjct: 66  GELSQARQL--------FEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTW 117

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             +I G++   +F+EAF+L  +MQ     EPD  T VTL+S C    +  +   V    I
Sbjct: 118 TILIGGYSQLNQFKEAFELFVQMQRC-GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQII 176

Query: 306 RRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           +  LGYD  L++ N+L+D Y KSN L  A  LF  + P  D VS+N+MI+G         
Sbjct: 177 K--LGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM-PEIDSVSYNAMITGYSKDGLDEK 233

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LF EM     + +  T  A+L +    + +  G+ IH + +K  F  N    NAL+ 
Sbjct: 234 AVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLD 293

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASP 469
            Y     ++ A  L   +    D   +N++I     +G  + A   F+ +  T       
Sbjct: 294 FYSKHDSVIDARKLFDEMPEQ-DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQF 352

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
              T++++ S   + E+   G+ +H   + +    +  V N+L+ MY +C   + A  +F
Sbjct: 353 PFATMLSIASNTLDWEM---GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIF 409

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLR 586
            +  + +   W  MISA+ Q       L+LF   R      ++ +  S+L A   +  L 
Sbjct: 410 TNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLS 469

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GKQ+H  +   GF  N F  SALLD+Y+ C               ++  +W++MISAY 
Sbjct: 470 LGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYA 529

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            +G+    ++ F EM  SG++P   S + +LSACSHSGLV+EGL ++N+M + Y + P  
Sbjct: 530 QNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR 589

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+  +VDML RSG+  EA + +  +PI P   +W ++L+AC  H + ++ ++ A+ LF 
Sbjct: 590 EHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFN 649

Query: 752 LEP-ENVGYYISLSNMYVALGRWKDAVEIGK 781
           +E   +   Y+++SN+Y A G+W++  ++ K
Sbjct: 650 MEELRDAAPYVNMSNIYAAAGQWENVSKVHK 680



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 170/653 (26%), Positives = 292/653 (44%), Gaps = 66/653 (10%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +++ Y        +  LF     +  VTW  +I    +          F +M   G   D
Sbjct: 89  MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 148

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T + ++S         Q   V    IK G  +   + N  V+ Y K   L+ +   F 
Sbjct: 149 YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFK 208

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   D+VS+N +++G   +   EK +  F EM  SG +    + ++ + A+  L ++  
Sbjct: 209 EMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVL 268

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH+  IK  +  + +VS  N+L+  YS+   +  A + F  M  +D VS+N II G+
Sbjct: 269 GQQIHSFVIKTNFVWNVFVS--NALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A +GK + AFDL  E+Q   + +       T++S+ +++L    GR +H   I      +
Sbjct: 327 AWDGKHKYAFDLFRELQFT-AFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE 385

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFS 367
           +L+ NSL+D Y+K     +AE++F  +      V W +MIS     G ++E L L ++  
Sbjct: 386 ILVGNSLVDMYAKCGKFEEAEMIFTNLT-HRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444

Query: 368 FSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
            ++++A       +L +  S  SL  GK +H + +K GF +N    +AL+ +Y  CG + 
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 504

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A    Q +   +  S WN +I A  QNG  +  +K+FK M       PDSV+ + V+SA
Sbjct: 505 DAVQTFQEMPDRNIVS-WNAMISAYAQNGEAEATLKSFKEMV-LSGLQPDSVSFLGVLSA 562

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +  L  EG   H  ++  +  LD R ++     Y    D+   S  F           
Sbjct: 563 CSHSGLVEEG-LWHFNSMTQIYKLDPRREH-----YASVVDMLCRSGRF----------- 605

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
                    N+AE    +L   +  +P+EI   S+L+AC          +IH +      
Sbjct: 606 ---------NEAE----KLMAEMPIDPDEIMWSSVLNAC----------RIHKN------ 636

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE-MCNSGIR 652
           QE +  ++  L      +  A + +M + Y   G+ WE +   H+ M + G++
Sbjct: 637 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQ-WENVSKVHKAMRDRGVK 688



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 227/504 (45%), Gaps = 29/504 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + L    +L+ +Y   +  + +  LF E    D V++NAMIT   ++      ++ F
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G++    T   ++ A   ++ +  G+ +H   IK   + +  + N  ++ Y+K 
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 298

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  M   D VS+N I+SG   +   +     FRE+ ++         ++ +
Sbjct: 299 DSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML 358

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           + ++   +   G+ IHA  I +   DS  + V NSL+ MY++CG  E AE  F  +T + 
Sbjct: 359 SIASNTLDWEMGRQIHAQTI-VTTADSE-ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRS 416

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V W A+I  +   G +EE   L ++M+   SV  D AT  +L+   A    L  G+ +H
Sbjct: 417 AVPWTAMISAYVQKGFYEEGLQLFNKMR-QASVIADQATFASLLRASASIASLSLGKQLH 475

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
            + I+     ++   ++L+D Y+K  S+  A   F  + P  ++VSWN+MIS        
Sbjct: 476 SFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM-PDRNIVSWNAMISAYAQNGEA 534

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTI 404
                 FKEM+    Q    + L +L +C+    +E     F      ++L     +   
Sbjct: 535 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA- 593

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHF-QEAIKTFKSM 461
              +++ M    G    A  L+  +  + D   W+ V+ AC   +N    + A     +M
Sbjct: 594 ---SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNM 650

Query: 462 TQQQNASPDSVTLVNVISACGNLE 485
            + ++A+P  V + N+ +A G  E
Sbjct: 651 EELRDAAP-YVNMSNIYAAAGQWE 673


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 192/626 (30%), Positives = 313/626 (50%), Gaps = 41/626 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L    V H L IK G   S Y +  N++IS Y++CG+I  A + F   + +D VSWN +I
Sbjct: 15  LYRASVNHCLAIKSGTTASIYTA--NNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMI 72

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF   G FE A + L  M+       D  +  +++   A    +  G+ VH   ++  +
Sbjct: 73  AGFVNLGNFETALEFLKSMK-RYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVK--M 129

Query: 310 GYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
           GY+  +   ++L+D Y+K   +  A  +F +I   N  V+WN++ISG            L
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNS-VTWNALISGYAQVGDRGTAFWL 188

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
              M     +    T   +L   + P+  +    +H   +K G +++T   NA++  Y  
Sbjct: 189 LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSE 248

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG +  A  +        D   WN ++ A   N   +EA + F  M Q     PD  T  
Sbjct: 249 CGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEM-QVLGFEPDIYTYT 307

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY--GRCRDIKSASTVFESCY 533
           +VISA        +GKSLHGL +K  +     + N+LI MY     + +  A  +FES  
Sbjct: 308 SVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
           N +  +WN +++ FSQ+     AL+ F ++  +    +  +  ++L +C+ L  L+ G+Q
Sbjct: 368 NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H  V   GF+ N F++S+L+ MYS C                S+ AW+S+I  Y  HG+
Sbjct: 428 VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGR 487

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G  A++LF  M +  ++    + +++L+ACSH GLV+EG  +  +M  +Y + P  EH+ 
Sbjct: 488 GKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYA 547

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++D+LGR+G+L EA   I+ +P +P   VW  +L AC   GD ++  QVA  L +LEPE
Sbjct: 548 CMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPE 607

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
               Y+ LS+M+  L RW +   I +
Sbjct: 608 EHCTYVLLSSMFGHLRRWNEKASIKR 633



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 181/663 (27%), Positives = 309/663 (46%), Gaps = 49/663 (7%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           +    L +  V HCL+IK+G  A     N  ++ YAKCG++  +   F      D VSWN
Sbjct: 10  SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           T+++G ++    E  L + + M   G   D  S  S +   AC+G +  G+ +H++ +K+
Sbjct: 70  TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           GYE + +    ++L+ MY++C  +E A   F  +  ++ V+WNA+I G+A  G    AF 
Sbjct: 130 GYEGNVFAG--SALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFW 187

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           LL  M+L   VE D  T   L++L  D  L +    VH   ++  L  D  + N+++  Y
Sbjct: 188 LLDCMEL-EGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAY 246

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           S+  S+  AE +F+      DLV+WNSM++             LF EM  L  +    T 
Sbjct: 247 SECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTY 306

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI--NCGDLVAAFSLLQRI 429
            +++ +         GKS+H   +K G        N+L+ MY+  +   +  A ++ + +
Sbjct: 307 TSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL 366

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
             N D   WN ++   +Q+G  ++A+K F++M + Q    D      V+ +C +L     
Sbjct: 367 -ENKDHVSWNSILTGFSQSGLSEDALKFFENM-RSQYVVIDHYAFSAVLRSCSDLATLQL 424

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ +H L LKS    +  V ++LI MY +C  I+ A   F++    +   WN +I  ++Q
Sbjct: 425 GQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQ 484

Query: 550 NKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           +     AL+LF   +    + + I+ V++L+AC+ +G++  G               SF+
Sbjct: 485 HGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGW--------------SFL 530

Query: 607 SSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
            S   D Y        ++ MI   G  G+  EA  L   M      P      +LL AC 
Sbjct: 531 KSMESD-YGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP---FEPDAMVWKTLLGACR 586

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEH--HVCIVDMLGRSGKLQEA---YEFIKNLPIQP 721
             G ++   Q  +++LE   + PE EH  +V +  M G   +  E       +K   ++ 
Sbjct: 587 TCGDIELASQVASHLLE---LEPE-EHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKK 642

Query: 722 KPG 724
            PG
Sbjct: 643 VPG 645



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 168/666 (25%), Positives = 297/666 (44%), Gaps = 60/666 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A + T+ ++++ Y+       +  +F ET  +D V+WN MI   V        L F 
Sbjct: 29  GTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFL 88

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G   D  +   I+  +  +  ++ G+ VH + +K G   +    +  ++MYAKC
Sbjct: 89  KSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKC 148

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  ++  ++V+WN ++SG                M   G + D+ + +  +
Sbjct: 149 ERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLL 208

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG-MTCK 240
                         +HA  +K G       +V N++I+ YS+CG IE AER F G +  +
Sbjct: 209 TLLDDPDLHKLTTQVHAKIVKHGLASD--TTVCNAIITAYSECGSIEDAERVFDGAIETR 266

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+WN+++  + +N + EEAF L  EMQ++   EPDI T  ++IS   +     +G+S+
Sbjct: 267 DLVTWNSMLAAYLVNNQEEEAFQLFLEMQVL-GFEPDIYTYTSVISAAFEGSHQGQGKSL 325

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL--FNAIAPMNDLVSWNSMISGL--- 355
           HG  I+R L + + + NSL+  Y KS+S S  E L  F ++    D VSWNS+++G    
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLEN-KDHVSWNSILTGFSQS 384

Query: 356 ------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                        +    +   ++FS   A+L SC+   +L+ G+ +H   LK GF  N 
Sbjct: 385 GLSEDALKFFENMRSQYVVIDHYAFS---AVLRSCSDLATLQLGQQVHVLVLKSGFEPNG 441

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              ++L+ MY  CG +  A         +S  + WN +I    Q+G  + A+  F  M +
Sbjct: 442 FVASSLIFMYSKCGVIEDARKSFDATPKDSSIA-WNSLIFGYAQHGRGKIALDLFFLM-K 499

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            +    D +T V V++AC ++ L  EG S    +++S  G+  R+++             
Sbjct: 500 DRRVKLDHITFVAVLTACSHIGLVEEGWSFLK-SMESDYGIPPRMEH------------- 545

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
                           + CMI    +      A  L   + FEP+ +   ++L AC   G
Sbjct: 546 ----------------YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCG 589

Query: 584 VLRHGKQIHGHVFHLGFQEN--SFISSALLDMYSNCKSNAAWSSMISAYGYHG-KGWEAI 640
            +    Q+  H+  L  +E+    + S++          A+   ++   G     GW  I
Sbjct: 590 DIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWI 649

Query: 641 ELFHEM 646
           E+ +E+
Sbjct: 650 EVKNEV 655


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 301/598 (50%), Gaps = 45/598 (7%)

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL-LHEMQLMRSVEPDIATVVT 283
           G +  A   F  +   DV ++N +I  ++ +     A  L L+   L   V P+  T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
            +  C+       GR++H +AI   L  DL +  +L+D Y K   L  A  +F A  P  
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF-ATMPAR 189

Query: 344 DLVSWNSMISGLFKEMLY-------LCSQFSF-------STLLAILPSCNSPESLEFGKS 389
           DLV+WN+M++G     +Y       L  Q          STL+A+LP      +L  G S
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 390 IHCWQLKLGFSNN-------TIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +H ++++    +N       T GV    AL+ MY  CG L+ A  +   +   ++ + W+
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WS 308

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I          +A   FK+M  Q        ++ + + AC +L+    G+ LH L  K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S +  D    N+L++MY +   I  A  +F+     +  +++ ++S + QN     A  +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F+ ++    EP+  ++VS++ AC+ L  L+HG+  HG V   G    + I +AL+DMY+ 
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +   +W++MI+ YG HG G EA  LF EM N G  P   + I L
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHSGLV EG  +++ M   Y + P  EH++C+VD+L R G L EAYEFI+++P++ 
Sbjct: 549 LSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              VW A+L AC  + +  +GK+V+ ++ +L PE  G ++ LSN+Y A GR+ +A E+
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 241/516 (46%), Gaps = 33/516 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HF 60
           G  A L  ST+LL  Y   +    +  +F     +D+V WNAM+     +      + H 
Sbjct: 155 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 214

Query: 61  FG-EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---------- 109
              +M    +R +++TL+ ++  L Q   L QG  VH   I+A + ++ +          
Sbjct: 215 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVL 274

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L    ++MYAKCG L  +   F  M   + V+W+ ++ G +  +   +  L F+ M   G
Sbjct: 275 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 334

Query: 170 E-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
                  S++SA+ A A L  L  G+ +HAL  K G      ++  NSL+SMY++ G I+
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD--LTAGNSLLSMYAKAGLID 392

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A   F  M  KD VS++A++ G+  NG+ EEAF +  +MQ   +VEPD AT+V+LI  C
Sbjct: 393 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPAC 451

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +    L+ GR  HG  I R L  +  + N+L+D Y+K   +  +  +FN + P  D+VSW
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN-MMPSRDIVSW 510

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQL 395
           N+MI+G            LF EM  L       T + +L +C+    +  GK   H  + 
Sbjct: 511 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRH 570

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             G +        ++ +    G L  A+  +Q +   +D   W  ++ AC    +     
Sbjct: 571 GYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG- 629

Query: 456 KTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
           K    M Q+     + + V L N+ SA G  + A E
Sbjct: 630 KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 33/490 (6%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVM--GLHFFGEMVEEGIRFDSTTL---LIIVSAL 83
           LF +  + DV T+N +I A   +       GLH +  M+   +  ++ T    L   SAL
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
              +C   GR +H  +I AG+ AD  +    ++MY KC  L  +   F+ M   D V+WN
Sbjct: 139 ADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195

Query: 144 TIMSGCLHNNYPEKCLLYF--REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
            +++G  H+      + +    +M     + +  +L + +   A  G L+ G  +HA  I
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRI 255

Query: 202 KLGYED--------SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           +             +  V +  +L+ MY++CG +  A R F  M  ++ V+W+A+I GF 
Sbjct: 256 RACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFV 315

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           L  +  +AF L   M           ++ + +  CA    LR G  +H    +  +  DL
Sbjct: 316 LCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADL 375

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
              NSL+  Y+K+  + +A  LF+ +A + D VS+++++SG            +FK+M  
Sbjct: 376 TAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              +   +T+++++P+C+   +L+ G+  H   +  G ++ T   NAL+ MY  CG +  
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           +  +   +  + D   WN +I     +G  +EA   F  M       PD VT + ++SAC
Sbjct: 495 SRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMN-NLGFPPDGVTFICLLSAC 552

Query: 482 GNLELAFEGK 491
            +  L  EGK
Sbjct: 553 SHSGLVIEGK 562


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 177/560 (31%), Positives = 292/560 (52%), Gaps = 67/560 (11%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF--YSKSNSLSKAELLFNAI 339
           + L+S C     +R  + +H + I+  L   L  ++ L++F   S+S  +S A  LFN+I
Sbjct: 33  LKLLSKCQS---IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89

Query: 340 APMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              N L  WNSMI GL            F  M+Y   + +  T   +L SC    S   G
Sbjct: 90  EEPN-LFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEG 148

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGD---------------------LVAAFSLL 426
           K IH   LKLGF ++     +L++MY   G+                     L+A ++L 
Sbjct: 149 KQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALW 208

Query: 427 QRISHN---------SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
             +             D   WN +I    Q G  +EA+  F+ M ++ N  P+  T+V+V
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM-RKANVPPNESTIVSV 267

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC        G S+        +  + ++ NALI MY +C D+++A  +F+     ++
Sbjct: 268 LSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDV 327

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN MI  ++   +   AL LFR +     EP EI+ +SIL +C  LG +  GK IH +
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           +       ++ +S++L+D+Y+ C               KS A+W++MI     HG+  +A
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKA 447

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
            ELF +M + GI P + + + +LSAC H+GLVD G Q++++M+++Y + P+++H+ C++D
Sbjct: 448 FELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMID 507

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR+G  +EA   ++N+ ++P   +WG++L AC  HG  ++G+ VAE LF+LEP+N G 
Sbjct: 508 LLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGA 567

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ LSN+Y   G+W D   I
Sbjct: 568 YVLLSNIYAGAGKWDDVARI 587



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 241/527 (45%), Gaps = 68/527 (12%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K IHA  IK G  ++ +        S  S+ GDI  A   F  +   ++  WN++I G +
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 254 LNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           ++     A  L+  ++++ S VEP+  T   L+  CA      EG+ +H + ++     D
Sbjct: 106 MS--LSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSD 163

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFN------AIA------------------------PM 342
           + +  SL++ Y++S  ++ A+L+F+      AI+                        P+
Sbjct: 164 VFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPV 223

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            D+VSWN+MI+G            LF++M       + ST++++L +C    +L+ G S+
Sbjct: 224 KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSM 283

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
             W    G  +N   VNAL+ MY  CGDL  A  L   +    D   WN++I   T    
Sbjct: 284 RSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER-DVISWNVMIGGYTHMCS 342

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
           ++EA+  F+ M       P  +T ++++ +C +L     GK +H    K+   + T +  
Sbjct: 343 YKEALALFREML-ASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLST 401

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           +LI +Y +C +I +A  VF+     +L +WN MI   + +    +A ELF  +     EP
Sbjct: 402 SLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEP 461

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
           NEI+ V ILSAC   G++  G+Q              F SS + D   + KS   +  MI
Sbjct: 462 NEITFVGILSACKHAGLVDLGQQ--------------FFSSMVQDYKISPKSQ-HYGCMI 506

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              G  G   EA  L   M    ++P  +   SLL AC   G V+ G
Sbjct: 507 DLLGRAGLFEEAESLLQNM---EVKPDGAIWGSLLGACRDHGRVELG 550



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 176/347 (50%), Gaps = 12/347 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+   Y + +  LF E   KDVV+WNAMI    +       L  F +M +  + 
Sbjct: 199 TALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            + +T++ ++SA  Q N L  G  +       G+ ++  L N  ++MY+KCGDL ++   
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL 318

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D +SWN ++ G  H    ++ L  FREM  SG +   ++  S + + A LG +
Sbjct: 319 FDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAI 378

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IHA  I   + +S   S++ SLI +Y++CG+I AA + F GM  K + SWNA+I 
Sbjct: 379 DLGKWIHAY-INKNF-NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHGYAI 305
           G A++G+ ++AF+L  +M     +EP+  T V ++S C  + L+  G+      V  Y I
Sbjct: 437 GLAMHGQADKAFELFSKMS-SDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKI 495

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                +       ++D   ++    +AE L   +    D   W S++
Sbjct: 496 SPKSQH----YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 225/520 (43%), Gaps = 58/520 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S ++   ++SY   +++LF      ++  WN+MI     +    + L FF  M+  G+  
Sbjct: 71  SAVSRSGDISY---AISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEP 127

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +S T   ++ +  ++    +G+ +H   +K G ++D  +    +NMYA+ G++N+++  F
Sbjct: 128 NSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVF 187

Query: 132 SG-------------------------------MHCADTVSWNTIMSGCLHNNYPEKCLL 160
                                            M   D VSWN +++G       ++ LL
Sbjct: 188 DQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALL 247

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSL 217
            F +M  +    +  ++ S ++A A    L  G  + +       ED    S   + N+L
Sbjct: 248 LFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSW-----IEDRGLCSNLKLVNAL 302

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           I MYS+CGD++ A   F  M  +DV+SWN +I G+     ++EA  L  EM L   VEP 
Sbjct: 303 IDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREM-LASGVEPT 361

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
             T ++++  CA    +  G+ +H Y  +        +  SL+D Y+K  ++  A  +F+
Sbjct: 362 EITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFD 421

Query: 338 AIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            +  +  L SWN+MI GL            F +M     + +  T + IL +C     ++
Sbjct: 422 GMK-IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480

Query: 386 FGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
            G+      ++    S  +     ++ +    G    A SLLQ +    D + W  ++ A
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGN 483
           C  +G  +      + + + +  +P + V L N+ +  G 
Sbjct: 541 CRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGK 580



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 9/289 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  ++L    +L+  YS     +++  LF +   +DV++WN MI            L  
Sbjct: 290 RGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALAL 349

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+  G+     T L I+ +   +  +  G+ +H    K      +SL    +++YAK
Sbjct: 350 FREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAK 409

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ ++   F GM      SWN ++ G   +   +K    F +M   G + + ++    
Sbjct: 410 CGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGI 469

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A    G +  G+   +  ++  Y+ SP       +I +  + G  E AE     M  K
Sbjct: 470 LSACKHAGLVDLGQQFFSSMVQ-DYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVK 528

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLIS 286
            D   W +++     +G+ E     L E+   R   +EPD      L+S
Sbjct: 529 PDGAIWGSLLGACRDHGRVE-----LGELVAERLFELEPDNPGAYVLLS 572


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 204/745 (27%), Positives = 369/745 (49%), Gaps = 71/745 (9%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QGR +H   +K G+  +  L N  V MY+KC  L+ +   FS +      +WNT+++ 
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG------------KVI 196
               + P      +  M    E+A+N    + +   A LG ++ G            +++
Sbjct: 100 ---QSSPAAVFDLYTRMKLE-ERAEN--RPNRLTIIAVLGAIASGDPSSSSSSRAQARIV 153

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H   I+ G +    + V  +L+  Y +CG +E+A   F  +   D++ WNA I   A N 
Sbjct: 154 HD-DIR-GSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGND 211

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--DLL 314
           +  +   LL     +  + P+ A+ V ++S C D   L   RS+H       LG+  D++
Sbjct: 212 ERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV--EELGFLGDVV 269

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQF 366
           +  +L+  Y +  S+ ++  +F A+A  N  VSWN+MI+   +         + +   Q 
Sbjct: 270 VATALVTMYGRCGSVDESIAVFEAMAVRNH-VSWNAMIAAFAQCGHRSAAFAIYWRMQQE 328

Query: 367 SFS----TLLAILPSCNSPESLEFGKS--IHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
            F     T +  L +  S  S + G+S  +H W    G   + +   AL+ MY + G + 
Sbjct: 329 GFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAID 388

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A +    I   +  S WN ++ A   NG  +EA++ F +M ++Q+ +P+ V+ + V+  
Sbjct: 389 RARAAFDAIPAKNIVS-WNAMLTAYGDNGRAREAMELFAAM-KRQSLAPNKVSYLAVLGC 446

Query: 481 CGNLELAFEGKSLHGLAL-KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           C ++    E +S+H   +   L   ++ + N ++ M+ R   ++ A   F++    +  +
Sbjct: 447 CEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVS 503

Query: 540 WNCMISAFSQNK---AEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV- 595
           WN  ++A S  +     + A    +H  F P++ ++VS++  C  LG L  G+ I   + 
Sbjct: 504 WNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLS 563

Query: 596 FHLGFQENSFISSALLDMYSNCKSNA------------------AWSSMISAYGYHGKGW 637
             +  + +  + SA+++M + C S+                   AW++MI+AY  HG G 
Sbjct: 564 AAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 623

Query: 638 EAIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHV 695
           +A++LF  M   S +RP  S+ +S+LS CSH+GLV++G+  +    E   +  +  EH+ 
Sbjct: 624 KALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYA 683

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-EP 754
           C+VD+LGR G L+EA +FI+ +P+     VW ++L ACS +GD + G++ A    +L   
Sbjct: 684 CLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRS 743

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
           ++VGY + LSN+Y A GRW+D++ +
Sbjct: 744 DSVGYVV-LSNIYAAAGRWEDSIRV 767



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 185/737 (25%), Positives = 333/737 (45%), Gaps = 62/737 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RF 71
           L+  YS     + + A F    ++ + TWN +I A   +   V  L+   ++ E    R 
Sbjct: 65  LVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA-QSSPAAVFDLYTRMKLEERAENRP 123

Query: 72  DSTTLLIIVSALTQMN------CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           +  T++ ++ A+   +         Q R+VH     + +  D  +    ++ Y KCG + 
Sbjct: 124 NRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVE 183

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           S+   FS +   D + WN  +  C  N+  P++ LL  R M   G   +  S  + +++ 
Sbjct: 184 SALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSC 243

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
                L   + IHA   +LG+     V V  +L++MY +CG ++ +   F  M  ++ VS
Sbjct: 244 GDHSSLPLARSIHARVEELGFLGD--VVVATALVTMYGRCGSVDESIAVFEAMAVRNHVS 301

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT-LISLCADSLL-LREGRSVHG 302
           WNA+I  FA  G    AF +   MQ      P+  T VT L + C+ S   L E  ++HG
Sbjct: 302 WNAMIAAFAQCGHRSAAFAIYWRMQ-QEGFRPNKITFVTALKAACSSSSQDLGESAALHG 360

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFK 357
           +     L  D+++  +L+  Y  + ++ +A   F+AI P  ++VSWN+M++     G  +
Sbjct: 361 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI-PAKNIVSWNAMLTAYGDNGRAR 419

Query: 358 EMLYLCSQFSFSTL-------LAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNAL 409
           E + L +     +L       LA+L  C   E +   +SIH   +  G F+  +   N +
Sbjct: 420 EAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSIANGV 476

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + M+   G L  A +     +   D+  WN  + A +       AI  F +M Q +   P
Sbjct: 477 VRMFARSGSLEEAMAAFD-ATVVKDSVSWNTKVAALSAREDLHGAITAFYTM-QHEGFRP 534

Query: 470 DSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRC-RDIKSAST 527
           D  TLV+V+  C +L     G+S+   L+    +  D  V++A++ M  +C   +     
Sbjct: 535 DKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECER 594

Query: 528 VFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQ 581
           +F    +   +L  WN MI+A++Q+    +AL+LFR ++      P+  + VS+LS C+ 
Sbjct: 595 LFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSH 654

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIE 641
            G++  G     H F L  +E   I    ++ Y         + ++   G  G   EA +
Sbjct: 655 AGLVEDGI----HCFFLA-REVLGIEQQPVEHY---------ACLVDVLGRMGYLREAED 700

Query: 642 LFHEMCNSGIRPTKSSV-ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
              +M      P  S V  SLL ACS  G ++ G +     +E Y  R ++  +V + ++
Sbjct: 701 FIRKM----PLPADSVVWTSLLGACSSYGDLEGGERAARAFIELY--RSDSVGYVVLSNI 754

Query: 701 LGRSGKLQEAYEFIKNL 717
              +G+ +++    +++
Sbjct: 755 YAAAGRWEDSIRVREDM 771



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 161/676 (23%), Positives = 295/676 (43%), Gaps = 77/676 (11%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMV 65
           L  +T+LL AY      ES+L +F      D++ WNA I AC  N       L     M 
Sbjct: 166 LFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMW 225

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG+  +  + + I+S+    + L   R +H    + G + D  +    V MY +CG ++
Sbjct: 226 LEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVD 285

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA-- 183
            S   F  M   + VSWN +++      +       +  M   G + + ++  +A+ A  
Sbjct: 286 ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAAC 345

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
           S+   +L     +H      G E    V V  +L++MY   G I+ A  AF  +  K++V
Sbjct: 346 SSSSQDLGESAALHGWIACAGLEGD--VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 403

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA++  +  NG+  EA +L   M+  +S+ P+  + + ++  C D   + E RS+H  
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMK-RQSLAPNKVSYLAVLGCCED---VSEARSIHAE 459

Query: 304 AI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
            +   L   +  + N ++  +++S SL +A   F+A   + D VSWN+ ++ L       
Sbjct: 460 VVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATV-VKDSVSWNTKVAALSAREDLH 518

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNA 408
                F  M +   +    TL++++  C    +LE G+SI   QL   +    + +  +A
Sbjct: 519 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQ-QQLSAAIEVERDVVVESA 577

Query: 409 LMHMYINCGDLVAA-FSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +M+M   CG  V     L  R+  +  D   WN +I A  Q+GH ++A+K F+ M Q+ +
Sbjct: 578 VMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSS 637

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PDS T V+V+S C +  L  +G     LA + ++G    ++   +  Y          
Sbjct: 638 VRPDSSTFVSVLSGCSHAGLVEDGIHCFFLA-REVLG----IEQQPVEHYA--------- 683

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
                          C++    +      A +  R +    + +   S+L AC+  G L 
Sbjct: 684 ---------------CLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLE 728

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G++                + A +++Y +   +  +  + + Y   G+  ++I +  +M
Sbjct: 729 GGER---------------AARAFIELYRS--DSVGYVVLSNIYAAAGRWEDSIRVREDM 771

Query: 647 CNSGIR---PTKSSVI 659
               ++   P KSS++
Sbjct: 772 AERRVKKRAPGKSSIV 787



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 208/471 (44%), Gaps = 43/471 (9%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I T+  L+  C     L +GR +H   +++ L  + L+ N L+  YSK  SL  A   F+
Sbjct: 24  IETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFS 83

Query: 338 AIAPMNDLVSWNSMISG---------LFKEML---YLCSQFSFSTLLAILPSCNSPESLE 385
           A+     + +WN++I+          L+  M       ++ +  T++A+L +  S +   
Sbjct: 84  ALRSRG-IATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 386 F------GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
                   + +H          +     AL+  Y  CG + +A  +  RI    D  CWN
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI-QVPDLICWN 201

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
             I+AC  N    +           +   P+  + V ++S+CG+       +S+H    +
Sbjct: 202 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 261

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                D  V  AL+TMYGRC  +  +  VFE+    N  +WN MI+AF+Q      A  +
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 321

Query: 560 FRHLE---FEPNEISIVSIL-SACTQLGV-LRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           +  ++   F PN+I+ V+ L +AC+     L     +HG +   G + +  + +AL+ MY
Sbjct: 322 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 381

Query: 615 SN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            +                K+  +W++M++AYG +G+  EA+ELF  M    + P K S +
Sbjct: 382 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++L  C     V E    +  ++       E+     +V M  RSG L+EA
Sbjct: 442 AVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 489



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 38/511 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +  +T+L+T Y      + S+A+F     ++ V+WNAMI A  +          +
Sbjct: 263 GFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY 322

Query: 62  GEMVEEGIRFDSTTLLIIVSAL--TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             M +EG R +  T +  + A   +    L +   +H     AG+  D  +    V MY 
Sbjct: 323 WRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 382

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
             G ++ +   F  +   + VSWN +++    N    + +  F  M       + VS   
Sbjct: 383 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY-- 440

Query: 180 AVAASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            +A   C  ++S  + IHA  +G  L  ++S   S+ N ++ M+++ G +E A  AF   
Sbjct: 441 -LAVLGCCEDVSEARSIHAEVVGNGLFAQES---SIANGVVRMFARSGSLEEAMAAFDAT 496

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KD VSWN  +   +       A    + MQ      PD  T+V+++ +CAD   L  G
Sbjct: 497 VVKDSVSWNTKVAALSAREDLHGAITAFYTMQ-HEGFRPDKFTLVSVVDVCADLGTLELG 555

Query: 298 RSVH---GYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIA-PMNDLVSWNSMI 352
           RS+      AI   +  D+++ +++M+  +K  +S+ + E LF  +     DLV+WN+MI
Sbjct: 556 RSIQQQLSAAIE--VERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMI 613

Query: 353 SG------------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--- 396
           +             LF+ M    S +   ST +++L  C+    +E G  IHC+ L    
Sbjct: 614 AAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREV 671

Query: 397 LGFSNNTIGVNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           LG     +   A L+ +    G L  A   ++++   +D+  W  ++ AC+  G  +   
Sbjct: 672 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 731

Query: 456 KTFKSMTQ-QQNASPDSVTLVNVISACGNLE 485
           +  ++  +  ++ S   V L N+ +A G  E
Sbjct: 732 RAARAFIELYRSDSVGYVVLSNIYAAAGRWE 762



 Score = 45.8 bits (107), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 22/193 (11%)

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-- 619
           H ++ P E ++  +L  C     L  G+Q+H  +   G   N  + + L+ MYS C+S  
Sbjct: 18  HDDYIPIE-TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 620 --NAA-----------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
             NAA           W+++I+A       ++          +  RP + ++I++L A +
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIA 136

Query: 667 HSGLVDEGLQYYNNMLEEYDVR-PETEHHV----CIVDMLGRSGKLQEAYEFIKNLPIQP 721
                          +   D+R  + E  +     ++D  G+ G ++ A E    + + P
Sbjct: 137 SGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV-P 195

Query: 722 KPGVWGAMLSACS 734
               W A + AC+
Sbjct: 196 DLICWNAAIMACA 208


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 182/617 (29%), Positives = 310/617 (50%), Gaps = 40/617 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+   G+ +HA  ++ G          N L++ Y++ G +  A R F GM  ++ VS+  
Sbjct: 59  GDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVT 118

Query: 248 IIDGFALNGKFEEAFDLLHEMQLM-RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++ G+AL G+FEEA +L   +Q     V   + T +  + +  D+  L  G  +H  A +
Sbjct: 119 LMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACG--IHACACK 176

Query: 307 RLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
             LG+D    +  +L+D YS   ++  A  +F+ I    D V+W +M+S           
Sbjct: 177 --LGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVG-KDAVTWTAMVSCYSENDIPEYA 233

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              F +M     + +   L + L +     S   GK IH   +K  +        AL+ M
Sbjct: 234 LNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDM 293

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CGD+  A ++ + I H+ D   W+ +I    Q+   ++A + F  M  +    P+  
Sbjct: 294 YAKCGDIEDAHAIFEMIPHD-DVILWSFLISRYAQSCQNEQAFEMFLRM-MRSFVVPNEF 351

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           +L  V+ AC N+     G+ +H LA+K     +  V NAL+ MY +CR+++++  +F S 
Sbjct: 352 SLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSL 411

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK 589
            + N  +WN +I  + Q+     AL +F   R       +++  S+L AC     ++H  
Sbjct: 412 QDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAV 471

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYHG 634
           QIH  +    F  ++ + ++L+D Y+ C                   +W+S+ISAY  HG
Sbjct: 472 QIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHG 531

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           +   A+ELF  M  S I+    + +SLLS C  +GLV++GL  +N+M+ ++ ++P  EH+
Sbjct: 532 RATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHY 591

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            CIV +LGR+G+L +A +FI ++P  P P VW A+LS+C  H +  +G+  AE +  +EP
Sbjct: 592 TCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEP 651

Query: 755 ENVGYYISLSNMYVALG 771
            +   Y+ LSNMY A G
Sbjct: 652 HDETTYVLLSNMYAAAG 668



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 261/532 (49%), Gaps = 37/532 (6%)

Query: 1   RGFLAHLPT--STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG +A L T  +  LL  Y+ +    ++  LF     ++ V++  ++            L
Sbjct: 74  RGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEAL 133

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F  +  EG   +   L  I+  L  M+       +H  + K G   ++ +    ++ Y
Sbjct: 134 ELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAY 193

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           + CG +  + C F G+   D V+W  ++S    N+ PE  L  F +M  +G + +   L+
Sbjct: 194 SLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLT 253

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           SA+ A+ CL     GK IH   +K  Y+  P+V    +L+ MY++CGDIE A   F  + 
Sbjct: 254 SALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVG--GALLDMYAKCGDIEDAHAIFEMIP 311

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREG 297
             DV+ W+ +I  +A + + E+AF++   +++MRS V P+  ++  ++  CA+   L  G
Sbjct: 312 HDDVILWSFLISRYAQSCQNEQAFEMF--LRMMRSFVVPNEFSLSGVLQACANIAFLELG 369

Query: 298 RSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
             +H  AI+  LGY  +L + N+LMD Y+K  ++  +  +F+++   N+ VSWN++I G 
Sbjct: 370 EQIHNLAIK--LGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANE-VSWNTIIVGY 426

Query: 355 -----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                      +F EM     L +Q +FS+   +L +C +  S++    IH    K  F+
Sbjct: 427 CQSGFAEDALSVFHEMRAAHMLSTQVTFSS---VLRACANTSSIKHAVQIHSLIEKSTFN 483

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           N+TI  N+L+  Y  CG +  A  + + I    D   WN +I A   +G    A++ F  
Sbjct: 484 NDTIVCNSLIDTYAKCGFIRDALKVFESIV-ECDVVSWNSIISAYALHGRATNALELFDR 542

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           M +    + D VT V+++S CG+  L  +     GL L + M +D R++ ++
Sbjct: 543 MNKSDIKAND-VTFVSLLSVCGSTGLVNQ-----GLWLFNSMMMDHRIKPSM 588



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 227/518 (43%), Gaps = 37/518 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+ AYS       +  +F     KD VTW AM++   EN      L+ F +M   G +
Sbjct: 187 TALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFK 246

Query: 71  FDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
            +     ++ SAL    CL     G+ +H  S+K     +  +    ++MYAKCGD+  +
Sbjct: 247 PNP---FVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDA 303

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   D + W+ ++S    +   E+    F  M  S    +  SLS  + A A +
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  G+ IH L IKLGYE   +V   N+L+ MY++C ++E +   F  +   + VSWN 
Sbjct: 364 AFLELGEQIHNLAIKLGYESELFVG--NALMDMYAKCRNMENSLEIFSSLQDANEVSWNT 421

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II G+  +G  E+A  + HEM+    +   + T  +++  CA++  ++    +H    + 
Sbjct: 422 IIVGYCQSGFAEDALSVFHEMRAAHMLSTQV-TFSSVLRACANTSSIKHAVQIHSLIEKS 480

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D ++ NSL+D Y+K   +  A  +F +I    D+VSWNS+IS             L
Sbjct: 481 TFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVEC-DVVSWNSIISAYALHGRATNALEL 539

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG-----VNALM 410
           F  M     + +  T +++L  C S   +  G     W       ++ I         ++
Sbjct: 540 FDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG----LWLFNSMMMDHRIKPSMEHYTCIV 595

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF---KSMTQQQNA 467
            +    G L  A   +  I        W  ++ +C    H   A+  +   K +  + + 
Sbjct: 596 RLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVV--HKNVALGRYAAEKVLDIEPHD 653

Query: 468 SPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMGL 504
               V L N+ +A G L E+A   KS+  + +K   GL
Sbjct: 654 ETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGL 691


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 183/601 (30%), Positives = 308/601 (51%), Gaps = 38/601 (6%)

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           S  NS++  Y + G +++A   F  M  +D VSWN +I G    G  ++      + +++
Sbjct: 71  STGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVI 130

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            + EP+++T+V  I  C     + EG  +HGY IR        + NSL+  Y+  N + +
Sbjct: 131 -AFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA-DNDMER 188

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPSC 378
           AE LF+ +    D++SW+ MI G            LF EM    S +    T++++L +C
Sbjct: 189 AEELFDEMCE-RDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKAC 247

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +   +  G+S+H   +  G   +    N+++ MY  C D  +AF     +    +T  W
Sbjct: 248 ANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCR-NTVSW 306

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I    +     EA+  F SM +      D VTLVN++ +C      F+ K +H + +
Sbjct: 307 NSIISGLVRTEKHSEALSLFYSMGKA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVI 365

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +    L+  V N+LI  Y +C  I+ A  +F+     +  +W+ MI+ F+       A+ 
Sbjct: 366 RWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIA 425

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF+ +   + +PN ++I+S+L A +    L+  K  HG     G      + +A+LDMY+
Sbjct: 426 LFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYA 485

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K+  +W +MI+A G +G   +A+ L  EM   G++P   + +S
Sbjct: 486 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLS 545

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP-- 718
           +LSACSH GLV+EGL ++ NM++++ V P  EH+ C+VDML R+GKL  A   I+ +P  
Sbjct: 546 VLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER 605

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           ++   G+WGA+LSAC   G++++G   A  + +LEP++   Y   S+MY A G W DA  
Sbjct: 606 MRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAAR 665

Query: 779 I 779
           +
Sbjct: 666 M 666



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 178/580 (30%), Positives = 279/580 (48%), Gaps = 43/580 (7%)

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
           +S  N  ++ Y K G L+S+   F  M   D+VSWN ++ G L     +K L +FR+   
Sbjct: 70  TSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARV 129

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
              + +  +L  A+ A   LG +  G  +H   I+ G+ D P  SV NSL+SMY+   D+
Sbjct: 130 IAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIP--SVQNSLLSMYAD-NDM 186

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           E AE  F  M  +DV+SW+ +I G+   G+ + A  L  EM    S+E D  T+V+++  
Sbjct: 187 ERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKA 246

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA++  +  GRSVHG  I R L YDL + NS++D YSK +    A   FN + P  + VS
Sbjct: 247 CANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEM-PCRNTVS 305

Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCN---SPESLEFGKSIHC 392
           WNS+ISGL +         + Y   +  F     TL+ +L SC     P   +F   IH 
Sbjct: 306 WNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHS 362

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             ++ G+  N   +N+L+  Y  C  +  A+ L  R+    DT  W+ +I      G   
Sbjct: 363 IVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRL-KTKDTVSWSAMIAGFNHCGKPD 421

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           EAI  F+ M Q Q   P+ VT+++++ A          K  HG+A++  +  +  V  A+
Sbjct: 422 EAIALFQEMNQAQE-KPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAI 480

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNE 569
           + MY +C +I  +   F+     N+ +W  MI+A   N     AL L   ++    +PN 
Sbjct: 481 LDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNV 540

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISA 629
           ++ +S+LSAC+  G++  G         L F EN      ++  +        +S M+  
Sbjct: 541 VTTLSVLSACSHGGLVEEG---------LSFFEN------MVQDHGVEPGLEHYSCMVDM 585

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
               GK   A+ L  +M    +R       +LLSAC  SG
Sbjct: 586 LSRAGKLNSAMNLIEKMPER-MRDGAGLWGALLSACRSSG 624



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 39/474 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL       SLL+ Y++ +  E +  LF E C +DV++W+ MI   V+     M L  F
Sbjct: 166 GFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLF 224

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM     I  D  T++ ++ A      +  GR VH + I  G+  D  + N  ++MY+K
Sbjct: 225 LEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSK 284

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C D  S+   F+ M C +TVSWN+I+SG +      + L  F  MG +G +AD V+L + 
Sbjct: 285 CDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNL 344

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +     +    K IH++ I+ GYE + +  V NSLI  YS+C  IE A + F  +  K
Sbjct: 345 LQSCKYFVDPFQCKFIHSIVIRWGYELNEF--VINSLIDAYSKCDLIELAWKLFDRLKTK 402

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSW+A+I GF   GK +EA  L  EM   +  +P+  T+++L+   + S  L+  +  
Sbjct: 403 DTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE-KPNGVTILSLLEAFSVSADLKRSKWA 461

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HG AIRR L  ++ +  +++D Y+K   +  +   F+ I P  ++VSW +MI+     GL
Sbjct: 462 HGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI-PEKNIVSWGAMIAACGMNGL 520

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI---G 405
            ++ L L S+           T L++L +C+    +E G         L F  N +   G
Sbjct: 521 ARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEG---------LSFFENMVQDHG 571

Query: 406 VNA-------LMHMYINCGDLVAAFSLLQRISH--NSDTSCWNIVIVACTQNGH 450
           V         ++ M    G L +A +L++++          W  ++ AC  +G+
Sbjct: 572 VEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGN 625



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 3/299 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L    S++  YS     ES+   F E   ++ V+WN++I+  V        L  
Sbjct: 266 RGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSL 325

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M + G R D  TL+ ++ +        Q + +H + I+ G   +  + N  ++ Y+K
Sbjct: 326 FYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSK 385

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +  +   F  +   DTVSW+ +++G  H   P++ +  F+EM  + E+ + V++ S 
Sbjct: 386 CDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSL 445

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A +   +L   K  H + I+ G   +  V+V  +++ MY++CG+I  + +AF  +  K
Sbjct: 446 LEAFSVSADLKRSKWAHGIAIRRGL--AAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEK 503

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++VSW A+I    +NG   +A  LL EM+L   ++P++ T ++++S C+   L+ EG S
Sbjct: 504 NIVSWGAMIAACGMNGLARDALALLSEMKL-HGLKPNVVTTLSVLSACSHGGLVEEGLS 561


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 281/535 (52%), Gaps = 41/535 (7%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T+ +L+  C+ +  LR G S+H   ++     D+ M N +++ Y+K    + A  +F+ +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              N LVSW++MISG            L+ +M  + +++ F++   ++ +C S  ++  G
Sbjct: 65  FEKN-LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNEYVFAS---VISACASLSAVTLG 120

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC--WNIVIVAC 445
           + IH   LK G+ + +   N+L+ MY+ C     A S+    ++  + +C  +N +I   
Sbjct: 121 QKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVF---TNTPEPNCVSYNALITGF 177

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            +N   +  ++ FK M +QQ   PD    + V+  C   E    G  LH   +K  +   
Sbjct: 178 VENQQLERGLEFFKLM-RQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST 236

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
             + N +ITMY     I+ A   F      ++ +WN +I+A S      + L +F+H+  
Sbjct: 237 PFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTE 296

Query: 566 E----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
           E    P++ +  S L+AC  L  + HGKQIH H+      ++  + +AL++MY+ C    
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                       +  +W+++I+ +G HG G  A+ELF +M  SGIRP   + I LL+AC+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H+GLVD+G  Y+N+M E Y + P+ EH  C++DMLGR+G+L EA E+++  P    P V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            ++LSA   HGD  +G+++A+ L KL+P     Y+ LSN+Y + G W    E  K
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARK 531



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 243/538 (45%), Gaps = 64/538 (11%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TL  ++   ++   L+ G  +H   +K G  +D  + N  +NMYAKCG    +   F 
Sbjct: 3   TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   + VSW+ ++SG      P+  +  + +M       +    +S ++A A L  ++ 
Sbjct: 63  EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTL 119

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ IH+  +K GYE   +VS  NSLISMY +C     A   F      + VS+NA+I GF
Sbjct: 120 GQKIHSRSLKFGYESISFVS--NSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             N + E   +    M+  + + PD    + ++ +C  +  L+ G  +H   ++  L   
Sbjct: 178 VENQQLERGLEFFKLMR-QQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST 236

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             + N ++  YS+ N + +AE  F  I    D++SWN++I+             +FK M 
Sbjct: 237 PFIGNVIITMYSELNLIQEAEKAFRLIEE-KDVISWNTLIAACSHCDDHAKGLRVFKHMT 295

Query: 361 ----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                    F+F++ LA   +C    S+  GK IH   ++     +    NAL++MY  C
Sbjct: 296 EETNVRPDDFTFTSALA---ACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKC 352

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS---PDSVT 473
           G +  A+ +  ++ H++  S WN +I     +G  + A++ F    +Q NAS   PDSVT
Sbjct: 353 GCIGYAYDIFSKMVHHNLVS-WNTIIAGFGNHGLGERAVELF----EQMNASGIRPDSVT 407

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            + +++AC +  L  +G+                  N++   YG   DI+          
Sbjct: 408 FIGLLTACNHAGLVDKGQLYF---------------NSMEETYGIAPDIEH--------- 443

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
                 ++C+I    +      A E  R   F  + + +VS+LSA    G +  G+++
Sbjct: 444 ------FSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERL 495



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 192/376 (51%), Gaps = 9/376 (2%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S SL++ Y   +    +L++F  T   + V++NA+IT  VEN+ +  GL FF  M ++G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D    + ++   T    LK+G  +HC ++K  + +   + NV + MY++   +  +E 
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLG 188
            F  +   D +SWNT+++ C H +   K L  F+ M   +  + D+ + +SA+AA A L 
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 189 ELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +S+GK IHA  ++   Y+D   + V N+L++MY++CG I  A   F  M   ++VSWN 
Sbjct: 319 SMSHGKQIHAHLMRTRLYQD---LGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNT 375

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II GF  +G  E A +L  +M     + PD  T + L++ C  + L+ +G+ ++  ++  
Sbjct: 376 IIAGFGNHGLGERAVELFEQMN-ASGIRPDSVTFIGLLTACNHAGLVDKGQ-LYFNSMEE 433

Query: 308 LLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
             G   D+   + L+D   ++  L++AE         ND V   S++S        +  +
Sbjct: 434 TYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGE 493

Query: 366 FSFSTLLAILPSCNSP 381
                LL + P   SP
Sbjct: 494 RLAKWLLKLQPVTTSP 509



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 186/393 (47%), Gaps = 22/393 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEE 67
           S  +L  Y+   +   +  +F E   K++V+W+AMI+   +     M +  + +M  V  
Sbjct: 41  SNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPN 100

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
              F S     ++SA   ++ +  G+ +H  S+K G  + S + N  ++MY KC   + +
Sbjct: 101 EYVFAS-----VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDA 155

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F+     + VS+N +++G + N   E+ L +F+ M   G   D  +    +      
Sbjct: 156 LSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTT 215

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  G  +H   +KL  + +P++   N +I+MYS+   I+ AE+AF  +  KDV+SWN 
Sbjct: 216 ENLKRGAELHCQTVKLNLDSTPFIG--NVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I   +      +   +   M    +V PD  T  + ++ CA    +  G+ +H + +R 
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  DL + N+L++ Y+K   +  A  +F+ +   N LVSWN++I+G            L
Sbjct: 334 RLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHN-LVSWNTIIAGFGNHGLGERAVEL 392

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
           F++M     +    T + +L +CN    ++ G+
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQ 425


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 227/800 (28%), Positives = 380/800 (47%), Gaps = 46/800 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+ AY       S+  +F E   ++ V+W  +++    N      L F  +MV+EG+  
Sbjct: 41  NLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFS 100

Query: 72  DSTTLLIIVSALTQMNCLKQ--GRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSE 128
           +    +  + A  +++ +    GR +H L  K     D+ + NV ++MY KCG  L  + 
Sbjct: 101 NHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYAL 160

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +   ++VSWN+I+S              F  M   G +    +  S V  +  L 
Sbjct: 161 RAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLT 220

Query: 189 E--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           E  +   + I     K G+    +V   + L+S +++ G +  A + F  M  ++ V+ N
Sbjct: 221 EPDVRLLEQIMCTIQKSGFLTDLFVG--SGLVSAFAKSGSLIHARKIFNQMETRNAVTLN 278

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL----CADSLLLREGRSVHG 302
            ++ G       EEA  L  +M  M  V P+ + V+ L S      A+ + L++GR VHG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEVGLKKGREVHG 337

Query: 303 YAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
           + I   L+ + + + N L++ Y+K  S++ A  +F       D VSWNSMI+GL +   +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-CFMTEKDSVSWNSMITGLDQNSCF 396

Query: 362 LCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           + +   +             TL++ + SC S +  + G+ IH   LKLG   N    NAL
Sbjct: 397 IEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA-CTQNGHFQEAIKTFKSMTQQQNAS 468
           M +Y   G L     +   +  +   S WN +I A  +      EA+  F +   +    
Sbjct: 457 MTLYAETGCLNECRKIFSSMPEHDQVS-WNSIIGALASSERSLPEAVACFLN-ALRAGQK 514

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            + +T  +V+SA  +L     GK +HGLALK  +  +   +NALI  YG+C ++     +
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKI 574

Query: 529 FES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGV 584
           F       +  TWN MIS +  N+   +AL+L   +      +      ++LSA   +  
Sbjct: 575 FSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVAT 634

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           L  G ++H        + +  + SAL+DMYS C              Y  + +  + LF 
Sbjct: 635 LERGMEVHACSVRACLESDVVVGSALVDMYSKC----------GRLDYALRFFNTMPLFA 684

Query: 645 EMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            M   G   P   + + +LSACSH+GL++EG +++ +M + Y + P  EH  C+ D+LGR
Sbjct: 685 NMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGR 744

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK--MGKQVAELLFKLEPENVGYYI 761
           +G+L +  +FI+ +P++P   +W  +L AC      K  +GK+ AE+LF+LEPEN   Y+
Sbjct: 745 AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYV 804

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            L NMY A GRW+D V+  K
Sbjct: 805 LLGNMYAAGGRWEDLVKARK 824



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 195/706 (27%), Positives = 319/706 (45%), Gaps = 75/706 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            ++ H    K G+  D  LCN  +N Y + GD  S+   F  M   + VSW  ++SG   
Sbjct: 20  AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSR 79

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS--YGKVIHALGIKLGYEDSP 209
           N   ++ L++ R+M   G  +++ +  SA+ A   L  +   +G+ IH L  KL Y    
Sbjct: 80  NGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDA 139

Query: 210 YVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            VS  N LISMY +C G +  A RAF  +  K+ VSWN+II  ++  G    AF + + M
Sbjct: 140 VVS--NVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSM 197

Query: 269 QL--MRSVEPDIATVVTLI-SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           Q    R  E    ++VT   SL    + L E   +     +     DL + + L+  ++K
Sbjct: 198 QCDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGFLTDLFVGSGLVSAFAK 255

Query: 326 SNSLSKAELLFNAIAPMNDLV-----------SWNSMISGLFKEM--LYLCSQFSFSTLL 372
           S SL  A  +FN +   N +             W    + LF +M  +   S  S+  LL
Sbjct: 256 SGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 373 AILPSCNSPES--LEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRI 429
           +  P  +  E   L+ G+ +H   +  G  +  +G+ N L++MY  CG +  A  +   +
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM 375

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           +   D+  WN +I    QN  F EA++ ++SM + +   P S TL++ IS+C +L+ A  
Sbjct: 376 TEK-DSVSWNSMITGLDQNSCFIEAVERYQSMRRHE-ILPGSFTLISSISSCASLKWAKL 433

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ +HG +LK  + L+  V NAL+T+Y     +     +F S    +  +WN +I A + 
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALAS 493

Query: 550 NKAE--------VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           ++          + AL   + L    N I+  S+LSA + L     GKQIHG        
Sbjct: 494 SERSLPEAVACFLNALRAGQKL----NRITFSSVLSAVSSLSFGELGKQIHGLALKYNIA 549

Query: 602 ENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           + +   +AL+  Y  C                + +  W+SMIS Y ++    +A++L   
Sbjct: 550 DEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWF 609

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDML 701
           M  +G R       ++LSA +    ++ G++ +        VR   E  V +    VDM 
Sbjct: 610 MMQTGQRLDSFMYATVLSAFASVATLERGMEVH-----ACSVRACLESDVVVGSALVDMY 664

Query: 702 GRSGKLQEAYEFIKNLPI----------QPKPGVWGAMLSACSHHG 737
            + G+L  A  F   +P+           P    +  +LSACSH G
Sbjct: 665 SKCGRLDYALRFFNTMPLFANMKLDGQTPPDHVTFVGVLSACSHAG 710



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 158/354 (44%), Gaps = 30/354 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
           G   ++  S +L+T Y+          +F      D V+WN++I A   + R +   +  
Sbjct: 445 GIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVAC 504

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F   +  G + +  T   ++SA++ ++  + G+ +H L++K  +  +++  N  +  Y K
Sbjct: 505 FLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGK 564

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG+++  E  FS M    D V+WN+++SG +HN    K L     M  +G++ D+   ++
Sbjct: 565 CGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYAT 624

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A A +  L  G  +HA  ++   E    V V ++L+ MYS+CG ++ A R F  M  
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESD--VVVGSALVDMYSKCGRLDYALRFFNTMP- 681

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-R 298
                                   L   M+L     PD  T V ++S C+ + LL EG +
Sbjct: 682 ------------------------LFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 717

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                +    L   +   + + D   ++  L K E     +    +++ W +++
Sbjct: 718 HFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 771


>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
          Length = 671

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 314/625 (50%), Gaps = 52/625 (8%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S+ + +H   +KLG   S Y+   N+L+  Y   G +  A   F  M  ++VVSW+ +I 
Sbjct: 19  SHPRAVHGAAVKLGCLASTYL--CNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIA 76

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVE---PDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
             +  G   +A  L   M  +R  E   P+  TV  L++ CA +     G  VH  A++ 
Sbjct: 77  ASSRLGVLGDALSLFAGM--LRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKL 134

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--------SG----- 354
            +  D  +  +L+D Y+K   +  +   F  + P   ++SW SMI        SG     
Sbjct: 135 GVDEDESVAGTLVDMYAKCGRVGSSWRAF-VLTPQRSVLSWTSMIACLVNHGDSGYRDTA 193

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LFK+ML L    + +T   IL   + PE L  GK +H   +K+G   +     AL+ M
Sbjct: 194 IVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAM 253

Query: 413 YINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           Y  CG +     L  RI H+  S TS    ++ A  +NG   EA++ F+ M         
Sbjct: 254 YGRCGGMDEITRLACRIRHDAFSRTS----LLTAYARNGCNMEAVRVFRDMLMGHMPIDQ 309

Query: 471 S--VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           S   +L+ V S+ G L +    K +H  ALK+   LDT + NA++T+YG+C DI S+  V
Sbjct: 310 SAITSLLQVCSSLGQLRVV---KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           F +  N +  +W  +++ + QN     AL  FR +     E +   I S+L AC+    L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G QIH  V  LG  +++ + +AL+ MY+ C               +   +W+++I+++
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG    AI+LF  M    + P   + + LLS+CS  GLV EG +Y+  M  +Y++ P+
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+  R+G+  +A +FI  +P QP   VW A+L++C  HG+  +G+  A+ + 
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL 606

Query: 751 KLEPENVGYYISLSNMYVALGRWKD 775
           +++PE+   YI LS+++ ++  W +
Sbjct: 607 EIKPEDPSPYIILSSIHASIDMWDE 631



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 292/617 (47%), Gaps = 46/617 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VH  ++K G +A + LCN  +  Y   G L  +   F  M   + VSW+ +++     
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 153 NYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 L  F  M   GE  + ++ ++++ VA  A   +   G+ +HA  +KLG ++   
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDE- 140

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK--FEEAFDLLHEM 268
            SV  +L+ MY++CG + ++ RAF     + V+SW ++I     +G   + +   +L + 
Sbjct: 141 -SVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKK 199

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L+  V P  AT   ++ +     LL  G+ VHG  ++     D  +  +L+  Y +   
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           + +   L  A    +D  S  S+++             +F++ML        S + ++L 
Sbjct: 260 MDEITRL--ACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQ 317

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            C+S   L   K IHC+ LK  F  +T+ +NA++ +Y  CGD +A+  ++     N DT 
Sbjct: 318 VCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD-IASSEIVFNTLENKDTI 376

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  ++    QN   QEA+  F+ M ++   S     + +V+ AC        G  +H  
Sbjct: 377 SWTALLTCYVQNDLSQEALFFFREMVRKGLES-SIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K  +  DT V+NAL+TMY +C  ++ A  +F S  N  + +WN +I++FSQ+  EV A
Sbjct: 436 VVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAA 495

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           ++LF  ++ E   P++ + V +LS+C+++G++  G +         F++       +   
Sbjct: 496 IQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEY--------FKQ-------MKTK 540

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           Y+       ++ M+  +   G+  +A++    M     +P +    +LL++C   G +D 
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597

Query: 674 GLQYYNNMLEEYDVRPE 690
           G      +LE   ++PE
Sbjct: 598 GRMAAKKILE---IKPE 611



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 292/647 (45%), Gaps = 71/647 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LH 59
           G LA      +LL +Y    +   +  +F E   ++VV+W+ +I A   +R  V+G  L 
Sbjct: 32  GCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAA--SSRLGVLGDALS 89

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F  M+  G   R +S T+  +V+   +      G  VH  ++K G+  D S+    V+M
Sbjct: 90  LFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDM 149

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN----YPEKCLLYFREMGWSGEQAD 173
           YAKCG + SS   F        +SW T M  CL N+    Y +  ++ F++M        
Sbjct: 150 YAKCGRVGSSWRAFVLTPQRSVLSW-TSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPT 208

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           N + S  +        L  GK +H   +K+G E  P  ++  +L++MY +CG ++   R 
Sbjct: 209 NATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDP--ALGTALLAMYGRCGGMDEITR- 265

Query: 234 FWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
              + C+   D  S  +++  +A NG   EA  +  +M LM  +  D + + +L+ +C+ 
Sbjct: 266 ---LACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVCSS 321

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              LR  + +H YA++     D L++N+++  Y K   ++ +E++FN +    D +SW +
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLEN-KDTISWTA 380

Query: 351 MIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           +++              F+EM+    + S   + ++L +C++  SL  G  IH   +KLG
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             ++T   NAL+ MY  CG +  A  +   +  N     WN +I + +Q+G+   AI+ F
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSM-RNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M Q++   PD  T V ++S+C  + L  EG                            
Sbjct: 500 -DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEG---------------------------- 530

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
           C   K   T +       +  + CM+  F++      A++    +  +P+++   ++L++
Sbjct: 531 CEYFKQMKTKYN--LEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENS---FISS--ALLDMYSNCKSN 620
           C   G L  G+     +  +  ++ S    +SS  A +DM+     N
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARN 635


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 204/749 (27%), Positives = 370/749 (49%), Gaps = 75/749 (10%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L QGR +H   +K G+  +  L N  V MY+KC  L+ +   FS +      +WNT+++ 
Sbjct: 40  LAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA 99

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG--------------- 193
               + P      +  M    E+A+N    + +   A LG ++ G               
Sbjct: 100 ---QSSPAAVFDLYTRMKLE-ERAEN--RPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQ 153

Query: 194 -KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            +++H   I+ G +    + V  +L+  Y +CG +E+A   F  +   D++ WNA I   
Sbjct: 154 ARIVHD-DIR-GSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMAC 211

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY- 311
           A N +  +   LL     +  + P+ A+ V ++S C D   L   RS+H       LG+ 
Sbjct: 212 AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV--EELGFL 269

Query: 312 -DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYL 362
            D+++  +L+  Y +  S+ ++  +F A+A  N  VSWN+MI+   +         + + 
Sbjct: 270 GDVVVATALVTMYGRCGSVDESIAVFEAMAVRNH-VSWNAMIAAFAQCGHRSAAFAIYWR 328

Query: 363 CSQFSFS----TLLAILPSCNSPESLEFGKS--IHCWQLKLGFSNNTIGVNALMHMYINC 416
             Q  F     T +  L +  S  S + G+S  +H W    G   + +   AL+ MY + 
Sbjct: 329 MQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST 388

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A +    I   +  S WN ++ A   NG  +EA++ F +M ++Q+ +P+ V+ + 
Sbjct: 389 GAIDRARAAFDAIPAKNIVS-WNAMLTAYGDNGRAREAMELFAAM-KRQSLAPNKVSYLA 446

Query: 477 VISACGNLELAFEGKSLHGLAL-KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           V+  C ++    E +S+H   +   L   ++ + N ++ M+ R   ++ A   F++    
Sbjct: 447 VLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVK 503

Query: 536 NLCTWNCMISAFSQNK---AEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +  +WN  ++A S  +     + A    +H  F P++ ++VS++  C  LG L  G+ I 
Sbjct: 504 DSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQ 563

Query: 593 GHV-FHLGFQENSFISSALLDMYSNCKSNA------------------AWSSMISAYGYH 633
             +   +  + +  ++SA+++M + C S+                   AW++MI+AY  H
Sbjct: 564 QQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQH 623

Query: 634 GKGWEAIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-T 691
           G G +A++LF  M   S +RP  S+ +S+LS CSH+GLV++G+  +    E   +  +  
Sbjct: 624 GHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPV 683

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C+VD+LGR G L+EA +FI+ +P+     VW ++L ACS +GD + G++ A    +
Sbjct: 684 EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIE 743

Query: 752 L-EPENVGYYISLSNMYVALGRWKDAVEI 779
           L   ++VGY + LSN+Y A GRW+D++ +
Sbjct: 744 LYRSDSVGYVV-LSNIYAAAGRWEDSIRV 771



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 188/744 (25%), Positives = 335/744 (45%), Gaps = 72/744 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RF 71
           L+  YS     + + A F    ++ + TWN +I A   +   V  L+   ++ E    R 
Sbjct: 65  LVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAA-QSSPAAVFDLYTRMKLEERAENRP 123

Query: 72  DSTTLLIIVSALT----------QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           +  T++ ++ A+           +   + Q R+VH     + +  D  +    ++ Y KC
Sbjct: 124 NKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKC 183

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSA 180
           G + S+   FS +   D + WN  +  C  N+  P++ LL  R M   G   +  S  + 
Sbjct: 184 GCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAI 243

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++      L   + IHA   +LG+     V V  +L++MY +CG ++ +   F  M  +
Sbjct: 244 LSSCGDHSSLPLARSIHARVEELGFLGD--VVVATALVTMYGRCGSVDESIAVFEAMAVR 301

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT-LISLCADSLL-LREGR 298
           + VSWNA+I  FA  G    AF +   MQ      P+  T VT L + C+ S   L E  
Sbjct: 302 NHVSWNAMIAAFAQCGHRSAAFAIYWRMQ-QEGFRPNKITFVTALKAACSSSSQDLGESA 360

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
           ++HG+     L  D+++  +L+  Y  + ++ +A   F+AI P  ++VSWN+M++     
Sbjct: 361 ALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI-PAKNIVSWNAMLTAYGDN 419

Query: 354 GLFKEMLYLCSQFSFSTL-------LAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIG 405
           G  +E + L +     +L       LA+L  C   E +   +SIH   +  G F+  +  
Sbjct: 420 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCC---EDVSEARSIHAEVVGNGLFAQESSI 476

Query: 406 VNALMHMYINCGDL---VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            N ++ M+   G L   VAAF      +   D+  WN  + A +       AI  F +M 
Sbjct: 477 ANGVVRMFARSGSLEEAVAAFD----ATVVKDSVSWNTKVAALSAREDLHGAITAFYTM- 531

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRC-R 520
           Q +   PD  TLV+V+  C +L     G+S+   L+    +  D  V +A++ M  +C  
Sbjct: 532 QHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGS 591

Query: 521 DIKSASTVFESCYN--CNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVS 574
            +     +F    +   +L  WN MI+A++Q+    +AL+LFR ++      P+  + VS
Sbjct: 592 SVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVS 651

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG 634
           +LS C+  G++  G     H F L  +E   I    ++ Y         + ++   G  G
Sbjct: 652 VLSGCSHAGLVEDGI----HCFFLA-REVLGIEQQPVEHY---------ACLVDVLGRMG 697

Query: 635 KGWEAIELFHEMCNSGIRPTKSSV-ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
              EA +   +M      P  S V  SLL ACS  G ++ G +     +E Y  R ++  
Sbjct: 698 YLREAEDFIRKM----PLPADSVVWTSLLGACSSYGDLEGGERAARAFIELY--RSDSVG 751

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNL 717
           +V + ++   +G+ +++    +++
Sbjct: 752 YVVLSNIYAAAGRWEDSIRVREDM 775



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 161/676 (23%), Positives = 295/676 (43%), Gaps = 77/676 (11%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMV 65
           L  +T+LL AY      ES+L +F      D++ WNA I AC  N       L     M 
Sbjct: 170 LFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMW 229

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG+  +  + + I+S+    + L   R +H    + G + D  +    V MY +CG ++
Sbjct: 230 LEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVD 289

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA-- 183
            S   F  M   + VSWN +++      +       +  M   G + + ++  +A+ A  
Sbjct: 290 ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAAC 349

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
           S+   +L     +H      G E    V V  +L++MY   G I+ A  AF  +  K++V
Sbjct: 350 SSSSQDLGESAALHGWIACAGLEGD--VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 407

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA++  +  NG+  EA +L   M+  +S+ P+  + + ++  C D   + E RS+H  
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMK-RQSLAPNKVSYLAVLGCCED---VSEARSIHAE 463

Query: 304 AI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
            +   L   +  + N ++  +++S SL +A   F+A   + D VSWN+ ++ L       
Sbjct: 464 VVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATV-VKDSVSWNTKVAALSAREDLH 522

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNA 408
                F  M +   +    TL++++  C    +LE G+SI   QL   +    + +  +A
Sbjct: 523 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQ-QQLSAAIEVERDVVVASA 581

Query: 409 LMHMYINCGDLVAA-FSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +M+M   CG  V     L  R+  +  D   WN +I A  Q+GH ++A+K F+ M Q+ +
Sbjct: 582 VMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSS 641

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
             PDS T V+V+S C +  L  +G     LA + ++G    ++   +  Y          
Sbjct: 642 VRPDSSTFVSVLSGCSHAGLVEDGIHCFFLA-REVLG----IEQQPVEHYA--------- 687

Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
                          C++    +      A +  R +    + +   S+L AC+  G L 
Sbjct: 688 ---------------CLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLE 732

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G++                + A +++Y +   +  +  + + Y   G+  ++I +  +M
Sbjct: 733 GGER---------------AARAFIELYRS--DSVGYVVLSNIYAAAGRWEDSIRVREDM 775

Query: 647 CNSGIR---PTKSSVI 659
               ++   P KSS++
Sbjct: 776 AERRVKKRVPGKSSIV 791



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 209/476 (43%), Gaps = 49/476 (10%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I T+  L+  C     L +GR +H   +++ L  + L+ N L+  YSK  SL  A   F+
Sbjct: 24  IETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFS 83

Query: 338 A-----IAPMNDLVSWNSMISGLFKEMLYLCSQFSFS--------TLLAILPSCNS--PE 382
           A     IA  N L++  S  + +F   LY   +            T++A+L +  S  P 
Sbjct: 84  ALRSRGIATWNTLIAAQSSPAAVFD--LYTRMKLEERAENRPNKLTIIAVLGAIASGDPS 141

Query: 383 SLEFGKSIHCWQLKL--------GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           S    ++    Q ++            +     AL+  Y  CG + +A  +  RI    D
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI-QVPD 200

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
             CWN  I+AC  N    +           +   P+  + V ++S+CG+       +S+H
Sbjct: 201 LICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIH 260

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
               +     D  V  AL+TMYGRC  +  +  VFE+    N  +WN MI+AF+Q     
Sbjct: 261 ARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRS 320

Query: 555 RALELFRHLE---FEPNEISIVSIL-SACTQLGV-LRHGKQIHGHVFHLGFQENSFISSA 609
            A  ++  ++   F PN+I+ V+ L +AC+     L     +HG +   G + +  + +A
Sbjct: 321 AAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTA 380

Query: 610 LLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+ MY +                K+  +W++M++AYG +G+  EA+ELF  M    + P 
Sbjct: 381 LVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPN 440

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           K S +++L  C     V E    +  ++       E+     +V M  RSG L+EA
Sbjct: 441 KVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 493



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 228/511 (44%), Gaps = 38/511 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +  +T+L+T Y      + S+A+F     ++ V+WNAMI A  +          +
Sbjct: 267 GFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY 326

Query: 62  GEMVEEGIRFDSTTLLIIVSAL--TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             M +EG R +  T +  + A   +    L +   +H     AG+  D  +    V MY 
Sbjct: 327 WRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 386

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
             G ++ +   F  +   + VSWN +++    N    + +  F  M       + VS   
Sbjct: 387 STGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSY-- 444

Query: 180 AVAASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            +A   C  ++S  + IHA  +G  L  ++S   S+ N ++ M+++ G +E A  AF   
Sbjct: 445 -LAVLGCCEDVSEARSIHAEVVGNGLFAQES---SIANGVVRMFARSGSLEEAVAAFDAT 500

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KD VSWN  +   +       A    + MQ      PD  T+V+++ +CAD   L  G
Sbjct: 501 VVKDSVSWNTKVAALSAREDLHGAITAFYTMQ-HEGFRPDKFTLVSVVDVCADLGTLELG 559

Query: 298 RSVH---GYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIA-PMNDLVSWNSMI 352
           RS+      AI   +  D+++ +++M+  +K  +S+ + E LF  +     DLV+WN+MI
Sbjct: 560 RSIQQQLSAAIE--VERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMI 617

Query: 353 SG------------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLK--- 396
           +             LF+ M    S +   ST +++L  C+    +E G  IHC+ L    
Sbjct: 618 AAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREV 675

Query: 397 LGFSNNTIGVNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           LG     +   A L+ +    G L  A   ++++   +D+  W  ++ AC+  G  +   
Sbjct: 676 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 735

Query: 456 KTFKSMTQ-QQNASPDSVTLVNVISACGNLE 485
           +  ++  +  ++ S   V L N+ +A G  E
Sbjct: 736 RAARAFIELYRSDSVGYVVLSNIYAAAGRWE 766



 Score = 43.1 bits (100), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 26/197 (13%)

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-- 619
           H ++ P E ++  +L  C     L  G+Q+H  +   G   N  + + L+ MYS C+S  
Sbjct: 18  HDDYIPIE-TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 620 --NAA-----------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
             NAA           W+++I+A       ++          +  RP K ++I++L A +
Sbjct: 77  DANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIA 136

Query: 667 HSGLVDEGLQYYNNMLEEY----DVR-PETEHHV----CIVDMLGRSGKLQEAYEFIKNL 717
                        ++ +      D+R  + E  +     ++D  G+ G ++ A E    +
Sbjct: 137 SGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI 196

Query: 718 PIQPKPGVWGAMLSACS 734
            + P    W A + AC+
Sbjct: 197 QV-PDLICWNAAIMACA 212


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 271/518 (52%), Gaps = 35/518 (6%)

Query: 294 LREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            ++G+ +H + I   +L  +  +   L  FY+    +S+AE++F+ I   N  + WN MI
Sbjct: 75  FKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFL-WNFMI 133

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
            G            L++EML    +    T   +L +C     +E G+ +H   +  G  
Sbjct: 134 RGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLE 193

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           ++    N+L+ MY   GD+  A  +  R++   D + WN +I    +N     A   F  
Sbjct: 194 SDIYVGNSLLAMYAKFGDMGTARMVFDRMAER-DLTSWNTMISGYAKNADSGTAFLVFDL 252

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG-LDTRVQNALITMYGRC 519
           M +      D  TL+ ++SAC +L+   EGK +HG A+++ +G  +    N+LI MY  C
Sbjct: 253 MGKA-GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNC 311

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSIL 576
             +  A  +FE     +  +WN MI  +++N     +L LFR +  +   P++++ +++L
Sbjct: 312 NCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVL 371

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            AC Q+  LR+G  IH ++   GF  N+ + +AL+DMYS C               KS  
Sbjct: 372 GACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLV 431

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +WS+M++ YG HG+G EAI +   M  + + P      S+LSACSH+GLV EG + +  M
Sbjct: 432 SWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKM 491

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            +EY+V+P   H+ C+VD+LGR+G L EAY  I+ + I+P   +W A+L+A   H + K+
Sbjct: 492 EKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKL 551

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            +  A+ +F + P+ V  YI LSN+Y A  RW D   +
Sbjct: 552 AEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERV 589



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 172/352 (48%), Gaps = 21/352 (5%)

Query: 19  NVSYFESSLALFYETCN--------------KDVVTWNAMITACVENRCVVMGLHFFGEM 64
           N +Y  + LA FY  C               K+   WN MI     N   +  L  + EM
Sbjct: 93  NNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREM 152

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +  G R D+ T   ++ A   +  ++ GR VH   +  G+ +D  + N  + MYAK GD+
Sbjct: 153 LCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDM 212

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
            ++   F  M   D  SWNT++SG   N       L F  MG +G  AD  +L   ++A 
Sbjct: 213 GTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSAC 272

Query: 185 ACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A L  +  GKVIH   ++  +G  +  +   TNSLI MY  C  +  A R F  +  KD 
Sbjct: 273 ADLKAVKEGKVIHGYAVRNSIGNYNKFF---TNSLIEMYCNCNCMVDARRLFERVRWKDT 329

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN++I G+A NG   E+  L   M L  S  PD  T + ++  C     LR G S+H 
Sbjct: 330 VSWNSMILGYARNGDAFESLRLFRRMALDGS-GPDQVTFIAVLGACDQIAALRYGMSIHS 388

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           Y +++    + ++  +L+D YSK  SL+ +  +F+ + P   LVSW++M++G
Sbjct: 389 YLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEM-PDKSLVSWSAMVAG 439



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 175/361 (48%), Gaps = 17/361 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +    SLL  Y+      ++  +F     +D+ +WN MI+   +N         F
Sbjct: 191 GLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVF 250

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
             M + G+  D TTLL ++SA   +  +K+G+V+H  +++  +   +    N  + MY  
Sbjct: 251 DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCN 310

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +  +   F  +   DTVSWN+++ G   N    + L  FR M   G   D V+  + 
Sbjct: 311 CNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAV 370

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   +  L YG  IH+  +K G++ +  V    +L+ MYS+CG +  + R F  M  K
Sbjct: 371 LGACDQIAALRYGMSIHSYLVKKGFDANTIVGT--ALVDMYSKCGSLACSRRVFDEMPDK 428

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +VSW+A++ G+ L+G+  EA  +L  M+   SV PD     +++S C+ + L+ EG+ +
Sbjct: 429 SLVSWSAMVAGYGLHGRGREAISILDGMK-ANSVIPDNGVFTSILSACSHAGLVVEGKEI 487

Query: 301 -----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA--IAPMNDLVSWNSMIS 353
                  Y ++  L +     + ++D   ++  L +A ++     I P +D+  W ++++
Sbjct: 488 FYKMEKEYNVKPALSH----YSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDI--WAALLT 541

Query: 354 G 354
            
Sbjct: 542 A 542



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 71/164 (43%), Gaps = 21/164 (12%)

Query: 540 WNCMISAFSQNKAEV---RALELFRH--LEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
           +N   S FSQ        R+L +  H   ++    +   ++L + T     + G+Q+H H
Sbjct: 25  YNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAH 84

Query: 595 VFHLGFQE-NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
           +      E N+++++ L   Y+ C               K++  W+ MI  Y  +G   +
Sbjct: 85  MISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMK 144

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           ++ L+ EM   G R    +   +L AC    LV+ G + ++ ++
Sbjct: 145 SLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 193/574 (33%), Positives = 293/574 (51%), Gaps = 51/574 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +HA  IK     S  V + NSL+++Y++C  +  A+  F  +  KDVVSWN II
Sbjct: 22  LQKGKALHAQIIK---SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCII 78

Query: 250 DGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +G++ +G    +  ++   Q MR+    P+  T   + +  +  +    GR  H  AI+ 
Sbjct: 79  NGYSQHGPSGSSH-VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKM 137

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL 362
               D+ + +SLM+ Y K+    +A  +F+ + P  + VSW +MISG     L  E L L
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTM-PERNSVSWATMISGYASQKLAAEALGL 196

Query: 363 C----------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
                      ++F F+++L+ L     PE +  GK IHC  +K G  +     NAL+ M
Sbjct: 197 FRLMRREEEGENEFVFTSVLSAL---TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTM 253

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A    +  S + ++  W+ +I    Q+G   +A+K F SM       P   
Sbjct: 254 YAKCGSLDDALQTFE-TSSDKNSITWSAMITGXAQSGDSDKALKLFSSM-HLSGIRPSEF 311

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFE 530
           T V VI+AC +L  A+EGK +H   LK  +G +++  V  AL+ MY +C  I  A   F+
Sbjct: 312 TFVGVINACSDLGAAWEGKQVHDYLLK--LGFESQIYVMTALVDMYAKCSSIVDARKGFD 369

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  W  MI  + QN     AL L+  +E E   PNE+++ S+L AC+ L  L  
Sbjct: 370 YLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQ 429

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           GKQIH      GF     I SAL  MY+ C               +   +W++MIS    
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQ 489

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G EA+ELF EM   G +P   + +++LSACSH GLV+ G  Y+  M +E+ + P  E
Sbjct: 490 NGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVE 549

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H+ C+VD+L R+GKL+EA EF ++  I    G+W
Sbjct: 550 HYACMVDILSRAGKLKEAIEFTESATID--HGMW 581



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 276/591 (46%), Gaps = 45/591 (7%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLC----NVFVNMYAKCGDLNSSECTFSGMHCADT 139
           T    L++G+ +H     A +I  SS C    N  VN+YAKC  L  ++  F  +   D 
Sbjct: 17  THNRSLQKGKALH-----AQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDV 71

Query: 140 VSWNTIMSGCLHNNY--PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           VSWN I++G   +        +  F+ M       +  + +    A++ L + + G++ H
Sbjct: 72  VSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAH 131

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A+ IK+  +    V V +SL++MY + G    A + F  M  ++ VSW  +I G+A    
Sbjct: 132 AVAIKM--DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKL 189

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAIRRLLGYDLLM 315
             EA  L    +LMR  E      V    L A +L  L+  G+ +H  A++  L   + +
Sbjct: 190 AAEALGLF---RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            N+L+  Y+K  SL  A   F   +  N  ++W++MI+G            LF  M    
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNS-ITWSAMITGXAQSGDSDKALKLFSSMHLSG 305

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA- 422
            + S  T + ++ +C+   +   GK +H + LKLGF +    + AL+ MY  C  +V A 
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365

Query: 423 --FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
             F  LQ      D   W  +I    QNG  ++A+  +  M + +   P+ +T+ +V+ A
Sbjct: 366 KGFDYLQ----EPDIVLWTSMIGGYVQNGENEDALSLYGRM-EMEGILPNELTMASVLKA 420

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +L    +GK +H   +K   GL+  + +AL TMY +C  +K  + VF      ++ +W
Sbjct: 421 CSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISW 480

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVF- 596
           N MIS  SQN     ALELF  ++ E   P+ ++ V+ILSAC+ +G++  G      +F 
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFD 540

Query: 597 HLGFQENSFISSALLDMYSNC-KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
             G        + ++D+ S   K   A     SA   HG  WE +E    M
Sbjct: 541 EFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGM-WEDVERVRRM 590



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 262/542 (48%), Gaps = 29/542 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN----RCVVMGLHFFGEMV 65
           + SL+  Y+       +  +F    NKDVV+WN +I    ++       VM L  F  M 
Sbjct: 43  ANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMEL--FQRMR 100

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            E    ++ T   + +A + +     GR+ H ++IK     D  + +  +NMY K G   
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   ++VSW T++SG        + L  FR M    E+ +N  + ++V ++ 
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE-EEGENEFVFTSVLSAL 219

Query: 186 CLGEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
            L EL + GK IH + +K G      VSV N+L++MY++CG ++ A + F   + K+ ++
Sbjct: 220 TLPELVNNGKQIHCIAVKNGL--LSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSIT 277

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+A+I G A +G  ++A  L   M L   + P   T V +I+ C+D     EG+ VH Y 
Sbjct: 278 WSAMITGXAQSGDSDKALKLFSSMHL-SGIRPSEFTFVGVINACSDLGAAWEGKQVHDYL 336

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EM 359
           ++      + +M +L+D Y+K +S+  A   F+ +    D+V W SMI G  +     + 
Sbjct: 337 LKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDA 395

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L L  +           T+ ++L +C+S  +LE GK IH   +K GF       +AL  M
Sbjct: 396 LSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTM 455

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L     + +R+    D   WN +I   +QNG  +EA++ F+ M Q +   PD V
Sbjct: 456 YAKCGCLKDGTLVFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEEM-QLEGTKPDYV 513

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T VN++SAC ++ L   G     +      G+D RV++   ++ +  R   +K A    E
Sbjct: 514 TFVNILSACSHMGLVERGWGYFRMMFDEF-GMDPRVEHYACMVDILSRAGKLKEAIEFTE 572

Query: 531 SC 532
           S 
Sbjct: 573 SA 574



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 169/339 (49%), Gaps = 10/339 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ +    +L+T Y+     + +L  F  + +K+ +TW+AMIT   ++      L  F
Sbjct: 239 GLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GIR    T + +++A + +    +G+ VH   +K G  +   +    V+MYAKC
Sbjct: 299 SSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKC 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  +   D V W +++ G + N   E  L  +  M   G   + ++++S +
Sbjct: 359 SSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVL 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IHA  +K G+     V + ++L +MY++CG ++     F  M  +D
Sbjct: 419 KACSSLAALEQGKQIHARTVKYGF--GLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SWNA+I G + NG  +EA +L  EMQL    +PD  T V ++S C+   L+       
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQL-EGTKPDYVTFVNILSACSHMGLVE-----R 530

Query: 302 GYAIRRLLGYDLLMMNSLMDFYS-KSNSLSKAELLFNAI 339
           G+   R++ +D   M+  ++ Y+   + LS+A  L  AI
Sbjct: 531 GWGYFRMM-FDEFGMDPRVEHYACMVDILSRAGKLKEAI 568



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 177/403 (43%), Gaps = 66/403 (16%)

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            SL+ GK++H   +K   S   I  N+L+++Y  C  L  A  + +RI  N D   WN +
Sbjct: 20  RSLQKGKALHAQIIKSSSSCVYIA-NSLVNLYAKCQRLREAKFVFERI-QNKDVVSWNCI 77

Query: 442 IVACTQNGHF--QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           I   +Q+G       ++ F+ M + +N +P++ T   V +A   L  A  G+  H +A+K
Sbjct: 78  INGYSQHGPSGSSHVMELFQRM-RAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK 136

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                D  V ++L+ MY +      A  VF++    N  +W  MIS ++  K    AL L
Sbjct: 137 MDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGL 196

Query: 560 FRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           FR +  E    NE    S+LSA T   ++ +GKQIH      G      + +AL+ MY+ 
Sbjct: 197 FRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAK 256

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI--SLLSACSHSGLVDEG 674
           C                G   +A++ F    +      K+S+   ++++  + SG  D+ 
Sbjct: 257 C----------------GSLDDALQTFETSSD------KNSITWSAMITGXAQSGDSDKA 294

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L+ +++M            H+        SG             I+P    +  +++ACS
Sbjct: 295 LKLFSSM------------HL--------SG-------------IRPSEFTFVGVINACS 321

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDA 776
             G    GKQV + L KL  E+  Y ++ L +MY       DA
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 188/617 (30%), Positives = 304/617 (49%), Gaps = 43/617 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L   K IH   IK    +     + N L+  YS+C D  +A + F  +  K V SW  ++
Sbjct: 77  LKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLM 136

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC--ADSLLLREGRSVHGYAIRR 307
            G   NG + +  D   E+ L   + PD   +   I  C   DS+++  G  VH   I R
Sbjct: 137 VGATENGFYRDGIDYFVEI-LGCDIVPDEYALSAAIQACIGVDSIVV--GEMVHAQVITR 193

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS 367
                  +  SL+  Y+K   +  +  +FN++   N  VSWN+MISG     LY  +  S
Sbjct: 194 GFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQ-VSWNAMISGFVSNGLYAEAYNS 252

Query: 368 FSTLLA--ILP----------SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  +L   I P          +      +E G+ I+    ++G  +N     AL+ M+  
Sbjct: 253 FLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAK 312

Query: 416 CGDLVAAFSLLQRISHNSDTSC---WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           CG +  ++S+   +S+ S       WN +I   T +GH +EA+  F  M Q  N   D  
Sbjct: 313 CGCVTESWSVF--VSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQN-NIKRDVY 369

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T  + +++  ++      K LHG+  KS   +   + NAL+  Y +C ++ +   +F++ 
Sbjct: 370 TYCSTLNSIADMRSLEYVKQLHGMIWKS-GSIGVSLCNALMDAYAKCGELDAMRKLFDTW 428

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK 589
              N  +W  +++A+SQ+     AL +F   R + F+PN+++   +L++C  L  L +G+
Sbjct: 429 EESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQ 488

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHG 634
           Q+H      GF  +  + S L+DMY+ C S                 +W++MIS Y  HG
Sbjct: 489 QVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHG 548

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              +A+ELF +M      P  ++ + LL ACSH GLVDEGL+Y++ M E Y + PE EH+
Sbjct: 549 MAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHY 608

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGR G+L EA++FI  +PI+P   VW  +L AC  HG+ ++ K  A+ +    P
Sbjct: 609 ACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNP 668

Query: 755 ENVGYYISLSNMYVALG 771
           ++    + LSN Y   G
Sbjct: 669 DDFAALVLLSNTYREAG 685



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 287/620 (46%), Gaps = 48/620 (7%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS--SLCNVFVNMYAKCGDLNSSE 128
           +  T+L+ ++       CLK+ + +H   IK  +I  S   + N  V  Y+KC D  S+ 
Sbjct: 59  YSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSAR 118

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  +      SW  +M G   N +    + YF E+       D  +LS+A+ A   + 
Sbjct: 119 QVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVD 178

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            +  G+++HA  I  G+    +V+   SL+ MY++ G I  + + F  +  ++ VSWNA+
Sbjct: 179 SIVVGEMVHAQVITRGFSSRTFVN--TSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAM 236

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF  NG + EA++    M L   + P++A  +++         + +GR ++  A    
Sbjct: 237 ISGFVSNGLYAEAYNSFLRM-LGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIG 295

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISG------------L 355
           +  ++ +  +L+D ++K   ++++  +F +  +     + WN+MISG            L
Sbjct: 296 MQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLL 355

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHM 412
           F  M     +    T  + L S     SLE+ K +H    K G    +IGV   NALM  
Sbjct: 356 FLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG----SIGVSLCNALMDA 411

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG+L A   L      ++  S W  ++ A +Q+  +++A+  F  M ++    P+ V
Sbjct: 412 YAKCGELDAMRKLFDTWEESNQIS-WTTLVTAYSQSSEWEDALSVFSQM-REMGFQPNQV 469

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T   V+++C +L     G+ +H L  K+    D  V++ LI MY +C  ++ A  VFES 
Sbjct: 470 TFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESL 529

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGK 589
            + ++ +W  MIS ++Q+     ALELFR +E     PN  + + +L AC+  G++  G 
Sbjct: 530 KDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGL 589

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +     FHL           + + Y        ++ ++   G  G+  EA +   +M   
Sbjct: 590 R----YFHL-----------MEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKM--- 631

Query: 650 GIRPTKSSVISLLSACSHSG 669
            I P +    +LL AC   G
Sbjct: 632 PIEPDEKVWSTLLGACRVHG 651



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 152/615 (24%), Positives = 271/615 (44%), Gaps = 57/615 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+ AYS  S F S+  +F E   K V +W  ++    EN     G+ +F E++   I  D
Sbjct: 104 LVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPD 163

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L   + A   ++ +  G +VH   I  G  + + +    + MYAK G +  S   F+
Sbjct: 164 EYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFN 223

Query: 133 GMHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVS-LSSAVAASACLGEL 190
            +   + VSWN ++SG + N  Y E    + R +G   E   NV+   S   A   LG++
Sbjct: 224 SLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLG--EEIRPNVACFISVSKAIGQLGDV 281

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG--MTCKDVVSWNAI 248
             G+ I+ +  ++G + +  + V  +LI M+++CG +  +   F      C   + WNA+
Sbjct: 282 EKGRYINRIAFEIGMQSN--IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAM 339

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF ++G  EEA  L   M    +++ D+ T  + ++  AD   L   + +HG  I + 
Sbjct: 340 ISGFTISGHGEEAMLLFLRM-CQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGM-IWKS 397

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
               + + N+LMD Y+K   L     LF+     N  +SW ++++             +F
Sbjct: 398 GSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQ-ISWTTLVTAYSQSSEWEDALSVF 456

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +M  +  Q +  T   +L SC S  SLE+G+ +H    K GF+ +    + L+ MY  C
Sbjct: 457 SQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKC 516

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  + + +  + D   W  +I    Q+G  ++A++ F+ M +    +P+S T + 
Sbjct: 517 GSVRDAIKVFESL-KDPDVISWTAMISGYAQHGMAKDALELFRKM-ELVLPNPNSATFLC 574

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +  L  EG       L+    ++ R        YG   +I+             
Sbjct: 575 LLFACSHGGLVDEG-------LRYFHLMEER--------YGLVPEIEH------------ 607

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
              + C++    +      A +    +  EP+E    ++L AC   G ++  K     V 
Sbjct: 608 ---YACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKV- 663

Query: 597 HLGFQENSFISSALL 611
            L +  + F +  LL
Sbjct: 664 -LSYNPDDFAALVLL 677



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 239/503 (47%), Gaps = 25/503 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF +    +TSLL  Y+ +     S  +F    N++ V+WNAMI+  V N       + 
Sbjct: 193 RGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNS 252

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+ E IR +    + +  A+ Q+  +++GR ++ ++ + GM ++  +    ++M+AK
Sbjct: 253 FLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAK 312

Query: 121 CGDLNSS----ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           CG +  S       FSG  C   + WN ++SG   + + E+ +L F  M  +  + D  +
Sbjct: 313 CGCVTESWSVFVSNFSG--CGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYT 370

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + + A +  L Y K +H +  K G   S  VS+ N+L+  Y++CG+++A  + F  
Sbjct: 371 YCSTLNSIADMRSLEYVKQLHGMIWKSG---SIGVSLCNALMDAYAKCGELDAMRKLFDT 427

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
               + +SW  ++  ++ + ++E+A  +  +M+ M   +P+  T   +++ CA    L  
Sbjct: 428 WEESNQISWTTLVTAYSQSSEWEDALSVFSQMREM-GFQPNQVTFSGVLASCASLCSLEY 486

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G+ VH    +     D  + + L+D Y+K  S+  A  +F ++    D++SW +MISG  
Sbjct: 487 GQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKD-PDVISWTAMISGYA 545

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
                     LF++M  +    + +T L +L +C+    ++ G +  H  + + G     
Sbjct: 546 QHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEI 605

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMT 462
                ++ +    G L  A+  + ++    D   W+ ++ AC  +G+ Q A I   K ++
Sbjct: 606 EHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLS 665

Query: 463 QQQNASPDSVTLVNVISACGNLE 485
              +     V L N     GN+E
Sbjct: 666 YNPDDFAALVLLSNTYREAGNIE 688


>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 631

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 185/656 (28%), Positives = 317/656 (48%), Gaps = 65/656 (9%)

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +SW++++S      + E+ LL F +      E  +   L+S ++A   +G  S  K +H 
Sbjct: 7   ISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGG-SIDKQMHG 65

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +K G++ + YV    SL+ +Y++ G+I+ A   F G+  K  V+W  II      G+ 
Sbjct: 66  FAVKSGFDRNVYVG--TSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRS 123

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           E +  L  +M+   +V PD   + +++  C+    ++ G+ +HG+ +RR +  D+  +N 
Sbjct: 124 EVSLQLFSQMR-ETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNV 182

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L+DFY+KS  +  A  LF+ +A  N ++SW +MI+G            LF EM  L  + 
Sbjct: 183 LIDFYTKSGKVQSARKLFDGMADRN-VISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRP 241

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
                 +IL SC S E+LE G+ +H + +K    ++    N L+ MY  CG L  A  + 
Sbjct: 242 DGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVF 301

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             ++  +  S +N +I   +      EA+  F+ M +    SP  +T V+++ A   L  
Sbjct: 302 DDMTIRNVVS-YNALIEGYSTLEQLSEAMNLFREM-RHGMLSPSFLTFVSLLGASATLSA 359

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK +H L  K  + ++    +ALI  Y +C  +  A  VF+     ++  WN M+  
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFG 419

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           ++Q      AL+L+  L   E +PN ++  ++ +A + L  L+HG+Q H H+   G   +
Sbjct: 420 YTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSH 479

Query: 604 SFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
            F +++L+DMY+ C       S+  A    G   + +  F  M    I+P          
Sbjct: 480 PFTTNSLIDMYAKC------GSLEDARKAFGHVKDGLHYFESMPKFSIKPG--------- 524

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
                                      TEH+ C+V +LGRSGKL EA EFI+ +P +P+ 
Sbjct: 525 ---------------------------TEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEA 557

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            VW ++LSAC   G+ ++GK  AE    ++  + G Y  LSN+Y + G W D  ++
Sbjct: 558 VVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKKV 613



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 246/514 (47%), Gaps = 36/514 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   TSL+  Y+     + +  +F     K  VTW  +ITACV+     + L  F
Sbjct: 71  GFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRGRSEVSLQLF 130

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M E  +  D   L  ++ A +Q+  ++ G+ +H   ++ G+  D S  NV ++ Y K 
Sbjct: 131 SQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVNVLIDFYTKS 190

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + S+   F GM   + +SW  +++G + N++  + +  F EM   G + D    +S +
Sbjct: 191 GKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPDGFVCTSIL 250

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +   L  L  G+ +HA  IK   E   ++   N LI MY++CG +  A + F  MT ++
Sbjct: 251 TSCGSLEALELGRQVHAYSIKGNVESDIFLQ--NGLIDMYAKCGSLNDARKVFDDMTIRN 308

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVS+NA+I+G++   +  EA +L  EM+    + P   T V+L+   A    L  G+ +H
Sbjct: 309 VVSYNALIEGYSTLEQLSEAMNLFREMR-HGMLSPSFLTFVSLLGASATLSALELGKQIH 367

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
               +  +  ++   ++L+DFYSK + L  A L+F+ +    D+V WN+M+ G  +    
Sbjct: 368 ALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTE-KDIVVWNAMLFGYTQQLEN 426

Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            E L L ++   S       T  A+  + ++  SL+ G+  H   +K G  ++    N+L
Sbjct: 427 EEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSL 486

Query: 410 MHMYINCGDLVAA-------------FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           + MY  CG L  A             F  + + S    T  +  V+    ++G   EA  
Sbjct: 487 IDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEA-- 544

Query: 457 TFKSMTQQQNASPDSVTLVNVISAC---GNLELA 487
             K   ++    P++V   +++SAC   GN+EL 
Sbjct: 545 --KEFIEKMPTEPEAVVWRSLLSACRVSGNVELG 576



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 247/525 (47%), Gaps = 36/525 (6%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           + +H  ++K+G   +  +    V++YAK G+++ +   F G+     V+W TI++ C+  
Sbjct: 61  KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKR 120

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
              E  L  F +M  +    D   LSS + A + L  +  GK IH   ++ G E    VS
Sbjct: 121 GRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEID--VS 178

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
             N LI  Y++ G +++A + F GM  ++V+SW A+I G+  N    EA  L  EM  + 
Sbjct: 179 FVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRL- 237

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              PD     ++++ C     L  GR VH Y+I+  +  D+ + N L+D Y+K  SL+ A
Sbjct: 238 GRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDA 297

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             +F+ +   N +VS+N++I G            LF+EM +     SF T +++L +  +
Sbjct: 298 RKVFDDMTIRN-VVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASAT 356

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +LE GK IH    K G S      +AL+  Y  C  L+ A  +  +++   D   WN 
Sbjct: 357 LSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEK-DIVVWNA 415

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           ++   TQ    +EA+K +  + Q     P+ VT   + +A  NL     G+  H   +K+
Sbjct: 416 MLFGYTQQLENEEALKLYTEL-QISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKT 474

Query: 501 LMGLDTR--VQNALITMYGRCRDIKSASTV----------FESCYNCNLCT----WNCMI 544
             GLD+     N+LI MY +C  ++ A             FES    ++      + C++
Sbjct: 475 --GLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVV 532

Query: 545 SAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
           S   ++     A E    +  EP  +   S+LSAC   G +  GK
Sbjct: 533 SLLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGK 577



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/500 (24%), Positives = 226/500 (45%), Gaps = 66/500 (13%)

Query: 341 PMNDLVSWNSMIS-----GLFKEMLYL-------CSQFSFSTLLAILPSCNSPESLEFGK 388
           P  +L+SW+S++S     G  +E L +       C++     +LA + S          K
Sbjct: 2   PERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSIDK 61

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H + +K GF  N     +L+ +Y   G++  A  +   +   S  + W  +I AC + 
Sbjct: 62  QMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVT-WTTIITACVKR 120

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  + +++ F  M ++ N  PD   L +V+ AC  LE    GK +HG  L+  + +D   
Sbjct: 121 GRSEVSLQLFSQM-RETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEF 565
            N LI  Y +   ++SA  +F+   + N+ +W  MI+ + QN  +  A++LF     L  
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
            P+     SIL++C  L  L  G+Q+H +      + + F+ + L+DMY+ C        
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  ++  +++++I  Y    +  EA+ LF EM +  + P+  + +SLL A +    
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359

Query: 671 VDEGLQYY---------------NNMLEEY-------DVR----PETEHHVCIVD--MLG 702
           ++ G Q +               + +++ Y       D R      TE  + + +  + G
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFG 419

Query: 703 RSGKL--QEAYEFIKNLPI-QPKPGV--WGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            + +L  +EA +    L I +PKP V  + A+ +A S+    + G+Q    + K   ++ 
Sbjct: 420 YTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSH 479

Query: 758 GYYI-SLSNMYVALGRWKDA 776
            +   SL +MY   G  +DA
Sbjct: 480 PFTTNSLIDMYAKCGSLEDA 499


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/557 (30%), Positives = 270/557 (48%), Gaps = 101/557 (18%)

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML----------YLCSQF 366
            ++KS  L+ A  +F A  P  D VSW  M+ GL     F E +          +  +QF
Sbjct: 1   MFAKSGRLADARGVF-AEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
              TL  +L SC   ++   G+ +H + +KLG  +     N++++MY  CGD   A ++ 
Sbjct: 60  ---TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 116

Query: 427 QRISHNSDTS------------------------------CWNIVIVACTQNGHFQEAIK 456
           +R+   S +S                               WN +I    QNG   +A+K
Sbjct: 117 ERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M  + + +PD  T+ +V+SAC NL     GK +H   L++ M  +++V NALI+ Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236

Query: 517 GRCR---------------------------------DIKSASTVFESCYNCNLCTWNCM 543
            +                                   D++SA  +F    N ++  W  M
Sbjct: 237 AKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I  + QN     A++LFR +     EPN  ++ ++LS C  L  L +GKQIH        
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 356

Query: 601 QENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           +++S +S+A++ MY+                  K    W+SMI A   HG+G EA+ LF 
Sbjct: 357 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 416

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           EM  +G+ P + + + +LSACSH+G V+EG +YY+ +  E+ + PE  H+ C+VD+L R+
Sbjct: 417 EMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARA 476

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G   EA EFI+ +P++P    WG++LSAC  H + ++ +  AE L  ++P N G Y +++
Sbjct: 477 GLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIA 536

Query: 765 NMYVALGRWKDAVEIGK 781
           N+Y A GRW DA  I K
Sbjct: 537 NVYSACGRWSDAARIWK 553



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 224/538 (41%), Gaps = 108/538 (20%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           M+AK G L  +   F+ M   D VSW  ++ G        + +    +M   G      +
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA------ 230
           L++ +++ A     + G+ +H+  +KLG      V V NS+++MY +CGD E A      
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGL--GSCVPVANSVLNMYGKCGDSETATTVFER 118

Query: 231 -------------------------ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
                                    E  F  M  + +VSWNA+I G+  NG   +A  L 
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             M    S+ PD  T+ +++S CA+   +R G+ VH Y +R  + Y+  + N+L+  Y+K
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238

Query: 326 SNSLSKAELL-------------FNAI-----------------APMN--DLVSWNSMIS 353
           S S+  A  +             F A+                   MN  D+V+W +MI 
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF+ M+    + +  TL A+L  C S   L++GK IHC  ++     
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           ++   NA++ MY   G    A  +  ++    +T  W  +IVA  Q+G  +EA+  F+ M
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
             +    PD +T V V+SAC +     EGK  +            +++N           
Sbjct: 419 L-RAGVEPDRITYVGVLSACSHAGFVNEGKRYY-----------DQIKN----------- 455

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                   E      +  + CM+   ++      A E  R +  EP+ I+  S+LSAC
Sbjct: 456 --------EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSAC 505



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 229/547 (41%), Gaps = 108/547 (19%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVEEGIRFDSTTLLIIVS--ALT 84
           +F E   +D V+W  M+     NR    G  +    +M  +G      TL  ++S  A+T
Sbjct: 14  VFAEMPERDAVSWTVMVVGL--NRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 71

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD--------------------- 123
           Q   +  GR VH   +K G+ +   + N  +NMY KCGD                     
Sbjct: 72  QAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNA 129

Query: 124 ----------LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQA 172
                     ++ +E  F  M     VSWN +++G   N    K L L+ R +  S    
Sbjct: 130 MVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP 189

Query: 173 DNVSLSSAVAASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQC------ 224
           D  +++S ++A A LG +  GK +HA  L  ++ Y       VTN+LIS Y++       
Sbjct: 190 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS----QVTNALISTYAKSGSVENA 245

Query: 225 ---------------------------GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
                                      GD+E+A   F  M  +DVV+W A+I G+  NG+
Sbjct: 246 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 305

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            +EA DL   M +    EP+  T+  ++S+CA    L  G+ +H  AIR LL     + N
Sbjct: 306 NDEAIDLFRSM-ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN 364

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFKEMLYLCSQ 365
           +++  Y++S S   A  +F+ +    + ++W SMI             GLF+EML    +
Sbjct: 365 AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVE 424

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA---- 421
               T + +L +C+    +  GK  +  Q+K     N   +   M  Y    DL+A    
Sbjct: 425 PDRITYVGVLSACSHAGFVNEGKRYYD-QIK-----NEHQIAPEMSHYACMVDLLARAGL 478

Query: 422 ---AFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
              A   ++R+    D   W  ++ AC   +N    E +   K ++   N S     + N
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAE-LAAEKLLSIDPNNSGAYSAIAN 537

Query: 477 VISACGN 483
           V SACG 
Sbjct: 538 VYSACGR 544



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 41/387 (10%)

Query: 28  ALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GIRFDSTTLLIIVSALTQM 86
           +LF    ++ +V+WNAMI    +N      L  F  M+ E  +  D  T+  ++SA   +
Sbjct: 145 SLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANL 204

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC------------------------- 121
             ++ G+ VH   ++  M  +S + N  ++ YAK                          
Sbjct: 205 GNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 264

Query: 122 --------GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
                   GD+ S+   F  M+  D V+W  ++ G   N   ++ +  FR M   G + +
Sbjct: 265 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 324

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + +L++ ++  A L  L YGK IH   I+   E S   SV+N++I+MY++ G    A R 
Sbjct: 325 SYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS--SVSNAIITMYARSGSFPWARRM 382

Query: 234 FWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           F    C  K+ ++W ++I   A +G+ EEA  L  EM L   VEPD  T V ++S C+ +
Sbjct: 383 F-DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM-LRAGVEPDRITYVGVLSACSHA 440

Query: 292 LLLREGRSVHGYAI-RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
             + EG+  +        +  ++     ++D  +++   S+A+     +    D ++W S
Sbjct: 441 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 500

Query: 351 MISGLFKEMLYLCSQFSFSTLLAILPS 377
           ++S          ++ +   LL+I P+
Sbjct: 501 LLSACRVHKNAELAELAAEKLLSIDPN 527



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 151/327 (46%), Gaps = 17/327 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y  +   ES+  +F    N+DVV W AMI    +N      +  F  M+  G  
Sbjct: 263 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 322

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S TL  ++S    + CL  G+ +HC +I++ +   SS+ N  + MYA+ G    +   
Sbjct: 323 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 382

Query: 131 FSGMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  + C   +T++W +++     +   E+ +  F EM  +G + D ++    ++A +  G
Sbjct: 383 FDQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 441

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNA 247
            ++ GK  +   IK  ++ +P +S    ++ + ++ G    A+     M  + D ++W +
Sbjct: 442 FVNEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGS 500

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPD-------IATVVTLISLCADSLLLREGRSV 300
           ++    ++ K  E  +L  E  L  S++P+       IA V +     +D+  + + R  
Sbjct: 501 LLSACRVH-KNAELAELAAEKLL--SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 557

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSN 327
              A+R+  G+    + S +  +   +
Sbjct: 558 K--AVRKETGFSWTHIRSKIHVFGADD 582


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 192/626 (30%), Positives = 306/626 (48%), Gaps = 41/626 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNA 247
           L+  + +HA  +  GY  S  ++    L+  Y++   G +  A R F GM  ++  +WNA
Sbjct: 57  LTEVRRLHAALLVRGYRTSTVLAA--QLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNA 114

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH----GY 303
           +I G    G+F EA     +M    SV  D  T   ++  CA   ++ +GR V       
Sbjct: 115 VIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEAD 174

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
             R +   ++ +  +L+D ++K   L +A  +F ++  + DL +W +MI G         
Sbjct: 175 IARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESM-EVRDLAAWTAMIGGTVHGGDWLE 233

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              L K M     +     L  ++P+C   + L  G ++H   +K G   +T  +NAL+ 
Sbjct: 234 VMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVD 293

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  L  A SL   I H  D   W+ +I   +QN  +  ++  F  M       P+S
Sbjct: 294 MYCKCARLDFAASLFWSIDHK-DVISWSTIIAGHSQNRRYHVSVSLFSEMVAS-GVKPNS 351

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            TL +++ +   L L   GK +H  +L++ +     + +ALI  Y R   IK A  VFE 
Sbjct: 352 TTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEF 411

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
               +L   N MI  +  N+    AL L R L  E   P+ +++VS+L  C Q   L  G
Sbjct: 412 TPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQG 471

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K++H +           +S+AL DMY  C               ++   ++++IS+ G H
Sbjct: 472 KELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKH 531

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   +A  LF  M   G+ P K + ++LLS CSH GL+D+GL +Y++ML +Y++ P+ EH
Sbjct: 532 GHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEH 591

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + CIVD+  RSG+L  A+ FI NL   P+  V G +LSAC  H    + + VAE +F+  
Sbjct: 592 YSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIFEQN 651

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P + GY+I LSN+Y + G W +   I
Sbjct: 652 PNDPGYHILLSNIYASAGMWSEVTRI 677



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/598 (25%), Positives = 285/598 (47%), Gaps = 42/598 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG+      +  L+ AY+ +       ++ +F     ++   WNA+I   V+       L
Sbjct: 70  RGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGLVDAGRFSEAL 129

Query: 59  HFFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV-- 115
            ++ +MV +G +  D  T   ++ A   +  ++QGR V   +++A +    + CNVFV  
Sbjct: 130 QWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQ-ENVEADIARGIAKCNVFVQC 188

Query: 116 ---NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
              +M+AKCG L  +   F  M   D  +W  ++ G +H     + +   + M   G + 
Sbjct: 189 ALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRP 248

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D++ L++ + A   + EL  G  +H   +K G        V N+L+ MY +C  ++ A  
Sbjct: 249 DSMILATVIPACGKVKELRTGTALHGCVVKCGV--GVDTCVLNALVDMYCKCARLDFAAS 306

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            FW +  KDV+SW+ II G + N ++  +  L  EM +   V+P+  T+ +++   ++  
Sbjct: 307 LFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEM-VASGVKPNSTTLASILPSLSELR 365

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           L R G+ +H +++R  L +   + ++L+DFYS+  S+ +AE++F    P NDLV  NSMI
Sbjct: 366 LFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFE-FTPKNDLVVSNSMI 424

Query: 353 SGLFKEMLYLCSQFSFS------------------TLLAILPSCNSPESLEFGKSIHCWQ 394
            G      Y+ ++ S S                  T++++LP CN    L  GK +H + 
Sbjct: 425 GG------YVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYA 478

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++   S+     NAL  MY  CG L  AF +   ++   +T  +N +I +  ++GH ++A
Sbjct: 479 IRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTER-NTVTYNTLISSLGKHGHAEQA 537

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALI 513
              F  M ++   SPD VT V ++S C +  L  +G   +   L+   +  D    + ++
Sbjct: 538 FFLFDLM-KRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIV 596

Query: 514 TMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQ-NKAEVRALELFRHLEFEPNE 569
            +Y R   + +A +   +      +    C++SA  + N+ ++  L   R  E  PN+
Sbjct: 597 DLYSRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIFEQNPND 654



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 212/461 (45%), Gaps = 18/461 (3%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D+  W AMI   V     +  +     M  EG R DS  L  ++ A  ++  L+ G  +
Sbjct: 213 RDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTAL 272

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H   +K G+  D+ + N  V+MY KC  L+ +   F  +   D +SW+TI++G   N   
Sbjct: 273 HGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRY 332

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
              +  F EM  SG + ++ +L+S + + + L    YGK IH   ++ G E S +++  +
Sbjct: 333 HVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLA--S 390

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +LI  YS+ G I+ AE  F      D+V  N++I G+ +N +  E+   L    L   + 
Sbjct: 391 ALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVN-EDSESALRLLRALLKEGLR 449

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  TVV+++ LC     L +G+ +H YAIR  +     + N+L D Y K   L  A  +
Sbjct: 450 PDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEI 509

Query: 336 FNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPES 383
           F  +   N  V++N++IS L K      + F F             T +A+L  C+    
Sbjct: 510 FLLMTERNT-VTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGL 568

Query: 384 LEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           ++ G   +   L+    S +    + ++ +Y   G L AA+S +  +    +      ++
Sbjct: 569 IDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGCLL 628

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPD-SVTLVNVISACG 482
            AC ++     A    + + +Q    P   + L N+ ++ G
Sbjct: 629 SACREHNRMDIAELVAERIFEQNPNDPGYHILLSNIYASAG 669


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 197/657 (29%), Positives = 332/657 (50%), Gaps = 60/657 (9%)

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L + V A +CLG L+ G+ IH+      +E++  +   N+LISMYS+CG +  A++AF 
Sbjct: 9   ALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLG--NALISMYSKCGSLIDAKQAFD 66

Query: 236 GM---TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS- 291
            +   + +DVV+WNA+I  F  NG   EA  L  +M    +  P+  T V+++  C ++ 
Sbjct: 67  RLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAG 126

Query: 292 -LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF---NAIAPMNDLVS 347
            L L + R++HG  +   +  +  +  +L+D Y K  SL  A  +F   +   P   LV+
Sbjct: 127 LLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVT 186

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI----- 390
            ++MIS             LF  M    ++ S  TL+++L +C+    L  G +      
Sbjct: 187 CSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSM---LPVGSATAFVLE 243

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
              ++     +N +G   L+  Y    DL  A +    I  + D   WN +  A  Q+  
Sbjct: 244 QAMEVVSATRDNVLGTT-LLTTYARSNDLSRARATFDAI-QSPDVVSWNAMAAAYLQHHR 301

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE---GKSLHGLALKSLMGLDTR 507
            +EA+  F+ M  +    P   T +  ++AC           GK +  L  ++ +  DT 
Sbjct: 302 PREALVLFERMLLE-GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTA 360

Query: 508 VQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
           V NA + MY +C  +  A  VFE  S    +  TWN M++A+  +     A ELF+ +E 
Sbjct: 361 VANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEA 420

Query: 566 E----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
           E    PN+++ V++L A T    +  G++IH  V   GF+ ++ I +ALL+MY+ C    
Sbjct: 421 EKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLD 480

Query: 618 -------KSNA------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                  KS++      AW+S+++ Y  +G+   A++LF  M   G+RP   + IS L+A
Sbjct: 481 DAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTA 540

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C+H G +++G +  + M  ++ + P ++H  CIVD+LGR G+L EA + ++    Q    
Sbjct: 541 CNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVI 599

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            W A+L AC +  + + G++ AE + +L+PE    YI L++MY A GRW +A  I K
Sbjct: 600 TWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 656



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 183/702 (26%), Positives = 317/702 (45%), Gaps = 82/702 (11%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +R +   L+ +V+A + +  L  GR +H          +S L N  ++MY+KCG L  ++
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 129 CTFSGMHCA---DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAAS 184
             F  +  A   D V+WN ++S  L N    + L  FR+M   G    N V+  S + + 
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 185 ACLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD- 241
              G LS   V  IH   +  G E   +V    +L+  Y + G ++ A   F   + ++ 
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRT--ALVDSYGKLGSLDDAWEVFLRKSDEEP 180

Query: 242 ---VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC-------ADS 291
              +V+ +A+I     NG  +E+  L + M L    +P   T+V++++ C       A +
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNL-EGTKPSGVTLVSVLNACSMLPVGSATA 239

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
            +L +   V       +LG  LL        Y++SN LS+A   F+AI    D+VSWN+M
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTT------YARSNDLSRARATFDAIQS-PDVVSWNAM 292

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNS--PESLE-FGKSIHCWQLK 396
            +             LF+ ML    + S +T +  L +C +  P++    GK I     +
Sbjct: 293 AAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEE 352

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAI 455
            G   +T   NA ++MY  CG L  A ++ +RIS    D   WN ++ A   +G  +EA 
Sbjct: 353 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAF 412

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + F++M  ++   P+ VT V V+ A  +     +G+ +H   + +    DT +QNAL+ M
Sbjct: 413 ELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNM 472

Query: 516 YGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
           Y +C  +  A  +F+  S    ++  W  +++ ++Q     RAL+LF  ++     PN I
Sbjct: 473 YAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHI 532

Query: 571 SIVSILSACTQLGVLRHG-KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISA 629
           + +S L+AC   G L  G + + G     G    S   S ++D+   C            
Sbjct: 533 TFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRC------------ 580

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVIS---LLSACSHSGLVDEGLQYYNNMLEEYD 686
               G+  EA +L         R +++ VI+   LL AC +S  ++ G +    +++   
Sbjct: 581 ----GRLDEAEKLLE-------RTSQADVITWMALLDACKNSKELERGERCAERIMQ--- 626

Query: 687 VRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNL---PIQPKPG 724
           + PE    ++ +  M   +G+  EA    K +    I+  PG
Sbjct: 627 LDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 668



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 257/554 (46%), Gaps = 51/554 (9%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RFDSTTLLIIVSALTQMN--CLKQ 91
            +DVVTWNAMI+A + N      L  F +M  +G    +S T + ++ +  +     L+ 
Sbjct: 73  KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLED 132

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT------VSWNTI 145
            R +H   + AG+  ++ +    V+ Y K G L+ +   F  +  +D       V+ + +
Sbjct: 133 VRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF--LRKSDEEPSTSLVTCSAM 190

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL--GELSYGKVIHALGIKL 203
           +S C  N +P++ L  F  M   G +   V+L S + A + L  G  +   +  A+ +  
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVS 250

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
              D+    +  +L++ Y++  D+  A   F  +   DVVSWNA+   +  + +  EA  
Sbjct: 251 ATRDN---VLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREAL- 306

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-----DLLMMNS 318
           +L E  L+  V P +AT +T ++ CA      +  S  G  I+ LL       D  + N+
Sbjct: 307 VLFERMLLEGVRPSVATFITALTACA--AYPPQTASAIGKRIQSLLEEAGLEGDTAVANA 364

Query: 319 LMDFYSKSNSLSKAELLFNAIAPM-NDLVSWNSMIS-----GLFKEMLYLCSQFSFS--- 369
            ++ Y+K  SL+ A  +F  I+P   D ++WNSM++     GL KE   L          
Sbjct: 365 TLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV 424

Query: 370 -----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
                T +A+L +  S  S+  G+ IH   +  GF ++T+  NAL++MY  CG L  A +
Sbjct: 425 KPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQA 484

Query: 425 LLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           +  + S N  D   W  ++    Q G  + A+K F +M QQQ   P+ +T ++ ++AC +
Sbjct: 485 IFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTM-QQQGVRPNHITFISALTACNH 543

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNA------LITMYGRCRDIKSASTVFESCYNCNL 537
                 GK   G  L S M  D  +  A      ++ + GRC  +  A  + E     ++
Sbjct: 544 -----GGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADV 598

Query: 538 CTWNCMISAFSQNK 551
            TW  ++ A   +K
Sbjct: 599 ITWMALLDACKNSK 612



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 230/503 (45%), Gaps = 38/503 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKD----VVTWNAMITACVENRCVVMGLHFFGEMVE 66
           T+L+ +Y  +   + +  +F    +++    +VT +AMI+AC +N      L  F  M  
Sbjct: 153 TALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNL 212

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLN 125
           EG +    TL+ +++A + +        V   +++      D+ L    +  YA+  DL+
Sbjct: 213 EGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLS 272

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +  TF  +   D VSWN + +  L ++ P + L+ F  M   G +    +  +A+ A A
Sbjct: 273 RARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332

Query: 186 CLGELS---YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--TCK 240
                +    GK I +L  + G E     +V N+ ++MY++CG +  A   F  +  T +
Sbjct: 333 AYPPQTASAIGKRIQSLLEEAGLEGD--TAVANATLNMYAKCGSLADARAVFERISPTRR 390

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D ++WN+++  +  +G  +EAF+L   M+  + V+P+  T V ++        + +GR +
Sbjct: 391 DCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREI 450

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN-AIAPMNDLVSWNSMISG----- 354
           H   +      D ++ N+L++ Y+K  SL  A+ +F+ + +   D+++W S+++G     
Sbjct: 451 HARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYG 510

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF  M     + +  T ++ L +CN    LE G    C +L  G + +   V 
Sbjct: 511 QAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQG----C-ELLSGMTPDHGIVP 565

Query: 408 ALMH------MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           A  H      +   CG L  A  LL+R S  +D   W  ++ AC  +   +   +  + +
Sbjct: 566 ASKHFSCIVDLLGRCGRLDEAEKLLERTSQ-ADVITWMALLDACKNSKELERGERCAERI 624

Query: 462 TQ-QQNASPDSVTLVNVISACGN 483
            Q     +   + L ++ +A G 
Sbjct: 625 MQLDPEVASSYIVLASMYAAAGR 647



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 141/314 (44%), Gaps = 15/314 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYE--TCNKDVVTWNAMITACVENRCVVMGLH 59
           G       + + L  Y+       + A+F       +D +TWN+M+ A   +        
Sbjct: 354 GLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFE 413

Query: 60  FFGEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F  M  E+ ++ +  T + ++ A T    + QGR +H   +  G  +D+ + N  +NMY
Sbjct: 414 LFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMY 473

Query: 119 AKCGDLNSSECTF--SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           AKCG L+ ++  F  S  +  D ++W ++++G       E+ L  F  M   G + ++++
Sbjct: 474 AKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHIT 533

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             SA+ A    G+L  G  + + G+   +   P     + ++ +  +CG ++ AE+    
Sbjct: 534 FISALTACNHGGKLEQGCELLS-GMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLER 592

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHE-MQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  DV++W A++D    + + E         MQL    +P++A+   +++    S+   
Sbjct: 593 TSQADVITWMALLDACKNSKELERGERCAERIMQL----DPEVASSYIVLA----SMYAA 644

Query: 296 EGRSVHGYAIRRLL 309
            GR      IR+ +
Sbjct: 645 AGRWNEAATIRKTM 658



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 23/198 (11%)

Query: 563 LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
           +E  PN  +++++++AC+ LG L  G++IH  +    F+ENS + +AL+ MYS C     
Sbjct: 1   MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS-SVISLLS 663
                        +    W++MISA+  +G   EA++LF +M + G  P  S + +S+L 
Sbjct: 61  AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120

Query: 664 ACSHSGLVD-EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE-FIKNLPIQP 721
           +C  +GL+  E ++  +  +    +  E      +VD  G+ G L +A+E F++    +P
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180

Query: 722 KPGVW--GAMLSACSHHG 737
              +    AM+SAC  +G
Sbjct: 181 STSLVTCSAMISACWQNG 198


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 147/433 (33%), Positives = 248/433 (57%), Gaps = 20/433 (4%)

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            ST + +L  C   ++L  GK +H   +K G++++ +  N L+ MY  CG +  A S+  
Sbjct: 24  ISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFD 83

Query: 428 RISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           +I   N+D   WN +I A TQNG  +EA+  FK+M   +    + VTL+N I AC +L  
Sbjct: 84  QIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTM-DLEGVIANQVTLINAIDACASLPS 142

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             EG+ +H +A+   +  DT V  +L+ M+G+C+++ +A  VF+S    NL TWN M++ 
Sbjct: 143 EEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAV 202

Query: 547 FSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +SQN    +A+++FR ++ E   P+ ++ ++I+ AC  L     G+ +H  +   G   +
Sbjct: 203 YSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD 262

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + +A++  Y  C               K+   WS++++AY  +G   EAIEL+HEM  
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G+     + + LL ACSH+G   +G+ Y+ +M+ ++ V P  EH++ ++D+LGRSG+LQ
Sbjct: 323 GGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQ 382

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
            + + I ++P +P    W A+L AC  HGD   G ++AEL+++L+PE+ G YI LSN+Y 
Sbjct: 383 LSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYS 442

Query: 769 ALGRWKDAVEIGK 781
           + GR  +A    K
Sbjct: 443 STGRMDEARRTRK 455



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 230/470 (48%), Gaps = 45/470 (9%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           +I+T V L+  CADS  L EG+ VH   ++     D L+ N L++ Y K   +++A  +F
Sbjct: 23  EISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVF 82

Query: 337 NAIAPMN-DLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAILPSCNSPES 383
           + I   N D++SWN +I     +GL KE L+L              TL+  + +C S  S
Sbjct: 83  DQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPS 142

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
            E G+ +H   +     ++T+   +L++M+  C ++ AA ++   +   +  + WN ++ 
Sbjct: 143 EEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVT-WNNMVA 201

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
             +QN   ++AI+ F+ M   +   PD+VT + +I AC  L    EG+ +H     S + 
Sbjct: 202 VYSQNWQCKKAIQVFRFM-DLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIP 260

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           +D  +  A++  YG+C  + +A  +F+S    N  TW+ +++A++QN  E  A+EL+  +
Sbjct: 261 MDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
                E N I+ + +L AC+       G+ + G  + +    + F    + + Y N    
Sbjct: 321 VQGGLEVNGITFLGLLFACSHA-----GRSMDGVDYFVSMIRD-FGVVPVFEHYLN---- 370

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
                +I   G  G+    ++L  ++ NS    P  S+ ++LL AC   G VD G +   
Sbjct: 371 -----LIDLLGRSGQ----LQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAE 421

Query: 680 NMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGV 725
            +   Y++ PE +  ++ + ++   +G++ EA    K +    I  +PG+
Sbjct: 422 LI---YELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGL 468



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 206/441 (46%), Gaps = 34/441 (7%)

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R + +T ++++        L +G+ VH   +K G  +D  + N+ + MY KCG +  +  
Sbjct: 21  REEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARS 80

Query: 130 TFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
            F  +    AD +SWN I+     N   ++ L  F+ M   G  A+ V+L +A+ A A L
Sbjct: 81  VFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL 140

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                G+++HA+ +    E    V    SL++M+ +C +++AA   F  +  K++V+WN 
Sbjct: 141 PSEEEGRIVHAIAVDKRLESDTMVG--TSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNN 198

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++  ++ N + ++A  +   M L   V+PD  T +T+I  CA      EGR VH      
Sbjct: 199 MVAVYSQNWQCKKAIQVFRFMDL-EGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS 257

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  D+ +  ++M FY K   L  A  +F+++   N  V+W+++++             L
Sbjct: 258 GIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKN-TVTWSAILAAYAQNGYETEAIEL 316

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           + EM+    + +  T L +L +C+       G+S+      +    +  GV  +   Y+N
Sbjct: 317 YHEMVQGGLEVNGITFLGLLFACSHA-----GRSMDGVDYFVSMIRD-FGVVPVFEHYLN 370

Query: 416 CGDLVAAFSLLQ-------RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ--QQN 466
             DL+     LQ        + +  D+S W  ++ AC  +G      +  + + +   ++
Sbjct: 371 LIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPED 430

Query: 467 ASPDSVTLVNVISACGNLELA 487
           + P  + L N+ S+ G ++ A
Sbjct: 431 SGP-YILLSNLYSSTGRMDEA 450



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 166/328 (50%), Gaps = 22/328 (6%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           N DV++WN +I A  +N      LH F  M  EG+  +  TL+  + A   +   ++GR+
Sbjct: 89  NADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRI 148

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           VH +++   + +D+ +    VNM+ KC +++++   F  +   + V+WN +++    N  
Sbjct: 149 VHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQ 208

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH----ALGIKLGYEDSPY 210
            +K +  FR M   G Q D V+  + + A A L   + G+++H    A GI +       
Sbjct: 209 CKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD------ 262

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V++  +++  Y +CG ++ A   F  +  K+ V+W+AI+  +A NG   EA +L HEM +
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEM-V 321

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHG--YAIRRLLGYDLLMMN----SLMDFYS 324
              +E +  T + L+  C+ +     GRS+ G  Y +  +  + ++ +     +L+D   
Sbjct: 322 QGGLEVNGITFLGLLFACSHA-----GRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLG 376

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +S  L  +E L N++    D  +W +++
Sbjct: 377 RSGQLQLSEDLINSMPYEPDSSAWLALL 404



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 127/277 (45%), Gaps = 5/277 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  +      +++ A+F     K++VTWN M+    +N      +  F  M  EG++
Sbjct: 166 TSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQ 225

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D+ T L I+ A   +    +GR+VH     +G+  D +L    ++ Y KCG L+++   
Sbjct: 226 PDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAI 285

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   +TV+W+ I++    N Y  + +  + EM   G + + ++    + A +  G  
Sbjct: 286 FDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGR- 344

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
           S   V + + +   +   P      +LI +  + G ++ +E     M  + D  +W A++
Sbjct: 345 SMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALL 404

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
               ++G  +    +    +L+  ++P+ +    L+S
Sbjct: 405 GACRMHGDVDRGARI---AELIYELDPEDSGPYILLS 438


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 281/537 (52%), Gaps = 52/537 (9%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYD----------LLMMNSLMDFYSKSNSLSKAE 333
           L+SLC     L  G S+H   I+     D          +++ NSL+  YS+   L  A 
Sbjct: 50  LLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDAT 109

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS--QFSFSTLLAILPSCN 379
            +F+ + PM D +SWNS ISGL            FK+ LY     QF  +TL  +L +C+
Sbjct: 110 KVFDHM-PMKDTISWNSRISGLLGNGDIEMGFRVFKQ-LYESGIYQFDQATLTTVLTACD 167

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
            PE     K IH      G+       NAL+  Y  CG   +   +   +S   +   W 
Sbjct: 168 KPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK-NVVTWT 226

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            VI   +Q   ++E++K F  M +     P+S+T ++ + AC  L+   EG+ +HGL  K
Sbjct: 227 AVISGLSQGQFYEESLKLFGKM-RDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWK 285

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             +  D  +++AL+ MY +C  ++ A  +FES    +  +   ++   +QN  E  ++++
Sbjct: 286 LGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQV 345

Query: 560 FRHLE-----FEPNEIS-IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           F  +       +PN IS I+ +    T L +   GKQIH  +    F  N F+++ L++M
Sbjct: 346 FVKMVKNGVVIDPNMISAILGVFGIDTSLAL---GKQIHSLIIKKSFGSNYFVNNGLINM 402

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS C               +++ +W+SMI+A+  HG G  A++L+ EM   G+ PT  + 
Sbjct: 403 YSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTF 462

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +SLL AC+H GLV++G+ +  +M ++Y + P  EH+ C+VDM+GR+G L EA +FI+ LP
Sbjct: 463 LSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLP 522

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P   VW A+L ACS HG+++MGK  A  LF   PE+   YI L+N+Y + G+WK+
Sbjct: 523 EKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKE 579



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 257/574 (44%), Gaps = 58/574 (10%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIK-LGYEDSP-------YVSVTNSLISMYSQC 224
           + V +S  ++     G L  G  +HA  IK  G+ D          + V NSL+SMYS+C
Sbjct: 43  NQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G++  A + F  M  KD +SWN+ I G   NG  E  F +  ++      + D AT+ T+
Sbjct: 103 GELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTV 162

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           ++ C         + +H      L GY  ++ + N+L+  Y +    S    +F+ ++  
Sbjct: 163 LTACDKPEFCYVSKMIHSLVF--LYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK 220

Query: 343 NDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSI 390
           N +V+W ++ISGL +   Y  S   F             T L+ L +C+  +++  G+ I
Sbjct: 221 N-VVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQI 279

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H    KLG   +    +ALM MY  CG L  A+ + +  +   D     +++V   QNG 
Sbjct: 280 HGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFES-AEEVDEVSMTVILVGLAQNGF 338

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQ 509
            +E+I+ F  M   +N       +++ I     ++ +   GK +H L +K   G +  V 
Sbjct: 339 EEESIQVFVKMV--KNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVN 396

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--- 566
           N LI MY +C D+  +  +F      N  +WN MI+AF+++    RAL+L+  +  E   
Sbjct: 397 NGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVW 456

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSM 626
           P +++ +S+L AC  +G++  G         +GF E      ++   Y        ++ +
Sbjct: 457 PTDVTFLSLLHACAHVGLVEKG---------MGFLE------SMAKDYGIGPRMEHYACV 501

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLE 683
           +   G  G   EA +    +      P K  ++   +LL ACS  G  + G    N +  
Sbjct: 502 VDMMGRAGLLNEAKKFIERL------PEKPGILVWQALLGACSIHGNSEMGKYAANQLFL 555

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           +    P    ++ + ++    GK +E    IK +
Sbjct: 556 QAPESPAP--YILLANIYSSEGKWKERARTIKKM 587



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 216/450 (48%), Gaps = 21/450 (4%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-E 170
           N  ++MY++CG+L  +   F  M   DT+SWN+ +SG L N   E     F+++  SG  
Sbjct: 93  NSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIY 152

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           Q D  +L++ + A          K+IH+L    GYE    ++V N+LI+ Y +CG   + 
Sbjct: 153 QFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYERE--ITVGNALITSYFRCGCCSSG 210

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
            R F  M+ K+VV+W A+I G +    +EE+  L  +M+    V+P+  T ++ +  C+ 
Sbjct: 211 RRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMR-DGPVDPNSLTYLSSLMACSG 269

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              +REGR +HG   +  + +DL + ++LMD YSK  SL  A  +F + A   D VS   
Sbjct: 270 LQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFES-AEEVDEVSMTV 328

Query: 351 MISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           ++ GL            F +M+        + + AIL       SL  GK IH   +K  
Sbjct: 329 ILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKS 388

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F +N    N L++MY  CGDL  +  +   +   +  S WN +I A  ++G+   A++ +
Sbjct: 389 FGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVS-WNSMIAAFARHGNGSRALQLY 447

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYG 517
           + M + +   P  VT ++++ AC ++ L  +G   L  +A    +G        ++ M G
Sbjct: 448 EEM-RLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMG 506

Query: 518 RCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           R   +  A    E       +  W  ++ A
Sbjct: 507 RAGLLNEAKKFIERLPEKPGILVWQALLGA 536



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 216/488 (44%), Gaps = 21/488 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-R 70
           SLL+ YS       +  +F     KD ++WN+ I+  + N  + MG   F ++ E GI +
Sbjct: 94  SLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQ 153

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD  TL  +++A  +       +++H L    G   + ++ N  +  Y +CG  +S    
Sbjct: 154 FDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRV 213

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + V+W  ++SG     + E+ L  F +M       ++++  S++ A + L  +
Sbjct: 214 FDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 273

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ IH L  KLG      + + ++L+ MYS+CG +E A + F      D VS   I+ 
Sbjct: 274 REGRQIHGLVWKLGVHFD--LCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILV 331

Query: 251 GFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           G A NG  EE+  +  +M +    ++P++ + +  +     SL L  G+ +H   I++  
Sbjct: 332 GLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLAL--GKQIHSLIIKKSF 389

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G +  + N L++ YSK   L  +  +F    P  + VSWNSMI+             L++
Sbjct: 390 GSNYFVNNGLINMYSKCGDLDDSIKIF-CWMPQRNSVSWNSMIAAFARHGNGSRALQLYE 448

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINC 416
           EM       +  T L++L +C     +E G   +       G          ++ M    
Sbjct: 449 EMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRA 508

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLV 475
           G L  A   ++R+        W  ++ AC+ +G+ +        +  Q   SP   + L 
Sbjct: 509 GLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLA 568

Query: 476 NVISACGN 483
           N+ S+ G 
Sbjct: 569 NIYSSEGK 576



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 4/352 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +    +L+T+Y       S   +F E   K+VVTW A+I+   + +     L  F
Sbjct: 186 GYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLF 245

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G+M +  +  +S T L  + A + +  +++GR +H L  K G+  D  + +  ++MY+KC
Sbjct: 246 GKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKC 305

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F      D VS   I+ G   N + E+ +  F +M  +G   D   +S+ +
Sbjct: 306 GSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAIL 365

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L+ GK IH+L IK  +  + +V+  N LI+MYS+CGD++ + + F  M  ++
Sbjct: 366 GVFGIDTSLALGKQIHSLIIKKSFGSNYFVN--NGLINMYSKCGDLDDSIKIFCWMPQRN 423

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-V 300
            VSWN++I  FA +G    A  L  EM+L   V P   T ++L+  CA   L+ +G   +
Sbjct: 424 SVSWNSMIAAFARHGNGSRALQLYEEMRL-EGVWPTDVTFLSLLHACAHVGLVEKGMGFL 482

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              A    +G  +     ++D   ++  L++A+     +     ++ W +++
Sbjct: 483 ESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 534


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 207/650 (31%), Positives = 328/650 (50%), Gaps = 59/650 (9%)

Query: 177 LSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERA 233
           + S++   AC+  G L  GK++H   I  G    P  SV  NSLI++YS+CGD E A   
Sbjct: 40  IKSSLLLKACIRSGNLELGKLLHHKLIDSGL---PLDSVLLNSLITLYSKCGDWENALSI 96

Query: 234 FWGMT--CKDVVSWNAIIDGFALNGKFEEAF-DLLHEMQLMRSV-EPDIATVVTLISLCA 289
           F  M    +D+VSW+AII  FA N     A    LH +Q  R++  P+      L+  C+
Sbjct: 97  FRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCS 156

Query: 290 DSLLLREGRSVHGYAIRRLLGY---DLLMMNSLMDFYSKSN-SLSKAELLFNAIAPMNDL 345
           + L    G ++  + ++   GY    + +  +L+D ++K    +  A ++F+ +   N L
Sbjct: 157 NPLFFTTGLAIFAFLLKT--GYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKN-L 213

Query: 346 VSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCW 393
           V+W  MI+     GL  + + L  +   S       TL ++L +C   E    GK +H W
Sbjct: 214 VTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSW 273

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            ++ G +++      L+ MY     +  +  +   + H++  S W  +I    Q+   QE
Sbjct: 274 VIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMS-WTALISGYVQSRQEQE 332

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR--VQNA 511
           AIK F +M      +P+  T  +V+ AC +L     GK LHG  +K  +GL T   V N+
Sbjct: 333 AIKLFCNMLHGH-VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK--LGLSTINCVGNS 389

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----- 566
           LI MY R   ++ A   F   +  NL ++N   +A   N   + + E F H E E     
Sbjct: 390 LINMYARSGTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFNH-EVEHTGVG 445

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---- 622
            +  +   +LS    +G +  G+QIH  +   GF  N  I++AL+ MYS C +  A    
Sbjct: 446 ASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505

Query: 623 -----------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                      W+S+IS +  HG   +A+ELF+EM   G++P + + I++LSACSH GL+
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLI 565

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           DE  +++N+M   + + P  EH+ C+VD+LGRSG L EA EFI ++P      VW   L 
Sbjct: 566 DEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLG 625

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +C  H +TK+G+  A+ + + EP +   YI LSN+Y + GRW D   + K
Sbjct: 626 SCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRK 675



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 280/564 (49%), Gaps = 58/564 (10%)

Query: 70  RFD-STTLLIIVSALTQMNCLKQG-----RVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           R D +TT  +I S+L    C++ G     +++H   I +G+  DS L N  + +Y+KCGD
Sbjct: 30  RLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGD 89

Query: 124 LNSSECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++   F  M  H  D VSW+ I+S   +N+   + LL F  M    + + N+   +  
Sbjct: 90  WENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHM---LQCSRNIIYPNEY 146

Query: 182 AASACLGE------LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAAERAF 234
             +A L         + G  I A  +K GY DS +V V  +LI M+++ G DI++A   F
Sbjct: 147 CFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDS-HVCVGCALIDMFTKGGLDIQSARMVF 205

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M  K++V+W  +I  ++  G  ++A DL   + L+    PD  T+ +L+S C +    
Sbjct: 206 DKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRL-LVSEYTPDKFTLTSLLSACVELEFF 264

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G+ +H + IR  L  D+ +  +L+D Y+KS ++  +  +FN +   N ++SW ++ISG
Sbjct: 265 SLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHN-VMSWTALISG 323

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN- 401
                       LF  ML+     +  T  ++L +C S      GK +H   +KLG S  
Sbjct: 324 YVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTI 383

Query: 402 NTIGVNALMHMYINCGDL---VAAFSLL---QRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           N +G N+L++MY   G +     AF++L     IS+N+          A   N    ++ 
Sbjct: 384 NCVG-NSLINMYARSGTMECARKAFNILFEKNLISYNT----------AADANAKALDSD 432

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           ++F    +         T   ++S    +    +G+ +H L +KS  G +  + NALI+M
Sbjct: 433 ESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISM 492

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISI 572
           Y +C + ++A  VF      N+ TW  +IS F+++    +ALELF  +     +PNE++ 
Sbjct: 493 YSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTY 552

Query: 573 VSILSACTQLGVL----RHGKQIH 592
           +++LSAC+ +G++    +H   +H
Sbjct: 553 IAVLSACSHVGLIDEAWKHFNSMH 576



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 228/501 (45%), Gaps = 33/501 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITA----CVENRCVVMGLHFFGEMV 65
           SL+T YS    +E++L++F    +  +D+V+W+A+I+      +E+R ++  LH   +  
Sbjct: 79  SLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHML-QCS 137

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN--VFVNMYAKCG- 122
              I  +      ++ + +       G  +    +K G   DS +C     ++M+ K G 
Sbjct: 138 RNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYF-DSHVCVGCALIDMFTKGGL 196

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           D+ S+   F  M   + V+W  +++        +  +  F  +  S    D  +L+S ++
Sbjct: 197 DIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLS 256

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A   L   S GK +H+  I+ G     +V  T  L+ MY++   +E + + F  M   +V
Sbjct: 257 ACVELEFFSLGKQLHSWVIRSGLASDVFVGCT--LVDMYAKSAAVENSRKIFNTMLHHNV 314

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +SW A+I G+  + + +EA  L   M L   V P+  T  +++  CA       G+ +HG
Sbjct: 315 MSWTALISGYVQSRQEQEAIKLFCNM-LHGHVTPNCFTFSSVLKACASLPDFGIGKQLHG 373

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
             I+  L     + NSL++ Y++S ++  A   FN +   N L+S+N+      K    L
Sbjct: 374 QTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKN-LISYNTAADANAKA---L 429

Query: 363 CSQFSFS-------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            S  SF+             T   +L       ++  G+ IH   +K GF  N    NAL
Sbjct: 430 DSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNAL 489

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG+  AA  +   + + +  + W  +I    ++G   +A++ F  M  +    P
Sbjct: 490 ISMYSKCGNKEAALQVFNDMGYRNVIT-WTSIISGFAKHGFATKALELFYEML-EIGVKP 547

Query: 470 DSVTLVNVISACGNLELAFEG 490
           + VT + V+SAC ++ L  E 
Sbjct: 548 NEVTYIAVLSACSHVGLIDEA 568



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 216/470 (45%), Gaps = 19/470 (4%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           +S+  +F +  +K++VTW  MIT   +   +   +  F  ++      D  TL  ++SA 
Sbjct: 199 QSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSAC 258

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            ++     G+ +H   I++G+ +D  +    V+MYAK   + +S   F+ M   + +SW 
Sbjct: 259 VELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT 318

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            ++SG + +   ++ +  F  M       +  + SS + A A L +   GK +H   IKL
Sbjct: 319 ALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKL 378

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G   S    V NSLI+MY++ G +E A +AF  +  K+++S+N   D  A     +E+F+
Sbjct: 379 GL--STINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN 436

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
             HE++    V     T   L+S  A    + +G  +H   ++   G +L + N+L+  Y
Sbjct: 437 --HEVE-HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMY 493

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           SK  +   A  +FN +   N +++W S+ISG            LF EML +  + +  T 
Sbjct: 494 SKCGNKEAALQVFNDMGYRN-VITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTY 552

Query: 372 LAILPSCNSPESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +A+L +C+    + E  K  +        S        ++ +    G L+ A   +  + 
Sbjct: 553 IAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMP 612

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            ++D   W   + +C  + + +      K + +++   P +  L++ + A
Sbjct: 613 FDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYA 662


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 176/589 (29%), Positives = 299/589 (50%), Gaps = 44/589 (7%)

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A + L  L +G+ IH   +K   +  P +++ N +++MY +CG ++ A++ F  M  +
Sbjct: 70  ISACSYLRSLEHGRKIHDHMLK--SKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPER 127

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW ++I G++ NG+   A +   +M L   V PD  T  ++I  C+    +  GR +
Sbjct: 128 NVVSWTSVIAGYSQNGQGGNALEFYFQM-LQSGVMPDQFTFGSIIKACSSLGDIGLGRQL 186

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H + ++   G  ++  N+L+  Y+KSN +  A  +F+ +A   DL+SW SMI+G      
Sbjct: 187 HAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMAT-RDLISWGSMIAGFSQLGY 245

Query: 356 -------FKEML----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                  FKEML    YL ++F F +   +  +C+S    E+G+ +H   +K G   +  
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIFGS---VFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              +L  MY  CG L  A  +  +I    D   WN +I      G  +EAI  F  M + 
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWNAIIAGFAYGGDAKEAIAFFSQM-RH 360

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           Q   PD +T+ +++ AC +    ++G  +HG   K  + LD  V N L+TMY +C +++ 
Sbjct: 361 QGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRD 420

Query: 525 ASTVFESCY-NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
           A   FE    N +L +WN +++A   +        L + +   +  P+ I++ ++L A  
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASA 480

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSS 625
           +   +  G Q+H +    G   +  +++ L+D+Y+ C S                 +WSS
Sbjct: 481 ETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSS 540

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +I  Y   G G EA++LF  M    ++P   + + +L+ACSH GLV+EG Q Y  M +E+
Sbjct: 541 LILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEF 600

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
            + P  EH  C+VD+L R+G L EA  FI  +   P   VW  +L+AC 
Sbjct: 601 GIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACK 649



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 268/535 (50%), Gaps = 19/535 (3%)

Query: 74  TTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
           +T   ++SA + +  L+ GR +H   +K+    D +L N  +NMY KCG L  ++  F  
Sbjct: 64  STYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDA 123

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           M   + VSW ++++G   N      L ++ +M  SG   D  +  S + A + LG++  G
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + +HA  +K   E   ++   N+LISMY++   I  A   F  M  +D++SW ++I GF+
Sbjct: 184 RQLHAHVLK--SEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFS 241

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             G   EA     EM       P+     ++ S C+  L    GR +HG +I+  LG D+
Sbjct: 242 QLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDV 301

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSF 368
               SL D Y+K   LS A ++F  I    DLV+WN++I+G       KE +   SQ   
Sbjct: 302 FAGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRH 360

Query: 369 STLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             L+       ++L +C SP  L  G  +H +  K+G   +    N L+ MY  C +L  
Sbjct: 361 QGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRD 420

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A    + +  N+D   WN ++ AC  +   +E     K M   Q+  PD +TL NV+ A 
Sbjct: 421 AIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQH-RPDYITLTNVLGAS 479

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                   G  +H  ALK+ +  D  V N LI +Y +C  +K+A  +F+S  N ++ +W+
Sbjct: 480 AETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWS 539

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHG 593
            +I  ++Q      AL+LF   R L+ +PN ++ V +L+AC+ +G++  G Q++G
Sbjct: 540 SLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYG 594



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 263/555 (47%), Gaps = 20/555 (3%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L     +L  Y      + +  +F     ++VV+W ++I    +N      L F+ +M++
Sbjct: 98  LTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQ 157

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+  D  T   I+ A + +  +  GR +H   +K+   A     N  ++MY K   +  
Sbjct: 158 SGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIID 217

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASA 185
           +   FS M   D +SW ++++G     Y  + L YF+EM   G    N     S  +A +
Sbjct: 218 ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L +  YG+ +H + IK G     +     SL  MY++CG +  A   F+ +   D+V+W
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGC--SLCDMYAKCGLLSCARVVFYQIGRPDLVAW 335

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII GFA  G  +EA     +M+  + + PD  TV +L+  C     L +G  VHGY  
Sbjct: 336 NAIIAGFAYGGDAKEAIAFFSQMR-HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYIN 394

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
           +  L  D+ + N+L+  Y+K + L  A   F  +    DLVSWN++++            
Sbjct: 395 KMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVF 454

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           GL K M     +  + TL  +L +     S+E G  +HC+ LK G + +    N L+ +Y
Sbjct: 455 GLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLY 514

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  A  +   +  N D   W+ +I+   Q G+ +EA+K FK+M ++ +  P+ VT
Sbjct: 515 AKCGSLKTARKIFDSVI-NPDVVSWSSLILGYAQFGYGEEALKLFKTM-RRLDVKPNHVT 572

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSAST-VFES 531
            V V++AC ++ L  EG  L+G   K    + TR   + ++ +  R   +  A   + + 
Sbjct: 573 FVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQM 632

Query: 532 CYNCNLCTWNCMISA 546
            ++ ++  W  +++A
Sbjct: 633 AFDPDIVVWKTLLAA 647



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 250/538 (46%), Gaps = 43/538 (7%)

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F EA      +Q        ++T   LIS C+    L  GR +H + ++     DL + N
Sbjct: 43  FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQN 102

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YL 362
            +++ Y K  SL  A+ +F+A+ P  ++VSW S+I+G             + +ML    +
Sbjct: 103 HILNMYGKCGSLKDAQKVFDAM-PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVM 161

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             QF+F +   I+ +C+S   +  G+ +H   LK  F  + I  NAL+ MY     ++ A
Sbjct: 162 PDQFTFGS---IIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDA 218

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +  R++   D   W  +I   +Q G+  EA+  FK M  Q    P+     +V SAC 
Sbjct: 219 LDVFSRMA-TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +L     G+ LHG+++K  +G D     +L  MY +C  +  A  VF      +L  WN 
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNA 337

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +I+ F+       A+  F   RH    P+EI++ S+L ACT    L  G Q+HG++  +G
Sbjct: 338 IIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG 397

Query: 600 FQENSFISSALLDMYSNC-------------KSNA---AWSSMISAYGYHGKGWEAIELF 643
              +  + + LL MY+ C             + NA   +W+++++A  +H +  E   L 
Sbjct: 398 LDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLL 457

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
             MC S  RP   ++ ++L A + +  ++ G Q +   L+   +  +      ++D+  +
Sbjct: 458 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT-GLNCDISVTNGLIDLYAK 516

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE--PENVGY 759
            G L+ A +   ++ I P    W +++   +  G  +   ++ + + +L+  P +V +
Sbjct: 517 CGSLKTARKIFDSV-INPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTF 573



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 229/468 (48%), Gaps = 39/468 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F AH+    +L++ Y+  +    +L +F     +D+++W +MI    +    +  L +F 
Sbjct: 195 FGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFK 254

Query: 63  EMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGM----IADSSLCNVFVNM 117
           EM+ +G+   +  +   + SA + +   + GR +H +SIK G+     A  SLC    +M
Sbjct: 255 EMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLC----DM 310

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKCG L+ +   F  +   D V+WN I++G  +    ++ + +F +M   G   D +++
Sbjct: 311 YAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITV 370

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            S + A     EL  G  +H    K+G + D P   V N+L++MY++C ++  A   F  
Sbjct: 371 RSLLCACTSPSELYQGMQVHGYINKMGLDLDVP---VCNTLLTMYAKCSELRDAIFFFEE 427

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M C  D+VSWNAI+     + + EE F LL  M + +   PD  T+  ++   A+++ + 
Sbjct: 428 MRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQH-RPDYITLTNVLGASAETVSIE 486

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G  VH YA++  L  D+ + N L+D Y+K  SL  A  +F+++    D+VSW+S+I G 
Sbjct: 487 IGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVIN-PDVVSWSSLILGY 545

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL------KL 397
                      LFK M  L  + +  T + +L +C+    +E G     WQL      + 
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEG-----WQLYGTMEKEF 600

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           G        + ++ +    G L  A + + +++ + D   W  ++ AC
Sbjct: 601 GIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAAC 648



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  +  L+  Y+     +++  +F    N DVV+W+++I    +       L  F
Sbjct: 499 GLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLF 558

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M    ++ +  T + +++A + +  +++G ++   +  + G++     C+  V++ A+
Sbjct: 559 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLAR 618

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
            G LN +E     M    D V W T+++ C
Sbjct: 619 AGCLNEAEAFIHQMAFDPDIVVWKTLLAAC 648


>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 208/726 (28%), Positives = 352/726 (48%), Gaps = 47/726 (6%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G  +H   IK G  +D  + N  +  YAK   L      F GM   + VSW  ++ G + 
Sbjct: 72  GTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQ 131

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGELSYGKVIHALGIKLGYEDSP 209
               E  L  F EM   G   +   L S + A  ++  G + +G  +H   +K+G E +P
Sbjct: 132 CEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRV-FGLCVHCFALKIGMERNP 190

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           +VS   S++S Y++ GDI AAER F  +   DV  WNA+I G+A  G     F+ +    
Sbjct: 191 FVSC--SVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGY---GFEAIVTAS 245

Query: 270 LMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           LMR   +  D  T + +I  C+       GR +HG  IR  L     +MN+LMD Y K+ 
Sbjct: 246 LMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNG 305

Query: 328 SLSKAELLFNAIAPMNDLVSWNSM------------ISGLFKEMLYLCSQFSFSTLLAIL 375
            +    ++F  +    D+V+WN++            I+ LF   L    + +  T   + 
Sbjct: 306 GMKSGLVVFKKMHD-RDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILF 364

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ-RISHNSD 434
             C    +L+ G    C  L  G  +     +AL++M+  CG +  A  + + ++S N  
Sbjct: 365 RECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSEN-- 422

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I     N    EA+KTF  + Q      +  T  NV+  C   E     + +H
Sbjct: 423 IIIWNELISGYKLNCCDAEALKTFYDLLQL-GVEANEYTFSNVLETCSRSENQLMNRQIH 481

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE- 553
           G+A KS       V ++LI  Y +C  +  +  VF      ++  W  MISAF     + 
Sbjct: 482 GVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDC 541

Query: 554 --VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
             +R+L L      +P+E  + SILS+C         K +H  +  LGF+ + F++SA+L
Sbjct: 542 EAIRSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVL 601

Query: 612 DMYS--------------NCKSN--AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           D Y+              +CKS+    +++MI AY +HG+  EA++ + +M  + ++P++
Sbjct: 602 DAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQ 661

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
           ++ +S+++AC H G V++G + + +M + Y + P  + + C+VDM  R+G L++A + I+
Sbjct: 662 ATFVSVIAACGHIGHVEKGCRLFKSM-DLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIE 720

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           +LP    P +  ++LS C  +G+ ++G+  A+ L +L P N   +  L  +Y  LG W+D
Sbjct: 721 SLPYPAWPAILRSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELGNWED 780

Query: 776 AVEIGK 781
           A ++ +
Sbjct: 781 AAKMRR 786



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 165/662 (24%), Positives = 308/662 (46%), Gaps = 37/662 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S +L+  Y+  +       +F     ++VV+W  M+   ++   V +GL  F
Sbjct: 83  GFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVF 142

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV----VHCLSIKAGMIADSSLCNVFVNM 117
            EM+ +G   +   L  ++ A        +GRV    VHC ++K GM  +  +    ++ 
Sbjct: 143 LEMIRDGFVPNEFGLGSVMKACGNS---VEGRVFGLCVHCFALKIGMERNPFVSCSVLSF 199

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK GD+ ++E  F  +   D   WN ++ G     Y  + ++    M   G   D  + 
Sbjct: 200 YAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTF 259

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + +   + LG+ ++G+ IH L I+   E S    V N+L+ MY + G +++    F  M
Sbjct: 260 INVIQGCSLLGDFNFGRQIHGLIIRSELELS--APVMNALMDMYFKNGGMKSGLVVFKKM 317

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +DVV+WN +   F+ +   ++   L H   L+ S+ P+  T   L   C   L L  G
Sbjct: 318 HDRDVVTWNTVFGSFSQHEDPKDIASLFHSF-LLTSMRPNHITFSILFRECGKLLNLDLG 376

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
                 A+   L  +  + ++L++ +S+   +  A L+F +    N ++ WN +ISG   
Sbjct: 377 LQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSEN-IIIWNELISGYKL 435

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F ++L L  + +  T   +L +C+  E+    + IH    K GF+++   
Sbjct: 436 NCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYV 495

Query: 406 VNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            ++L+  YI CG   D +  F++L R     D + W  +I A    G   EAI++  ++ 
Sbjct: 496 CSSLIKGYIKCGLLDDSLKVFNMLDR----PDMAAWGTMISAFVHQGWDCEAIRSL-NLL 550

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            +    PD   L +++S+C +     + KS+H L +K        V +A++  Y +C DI
Sbjct: 551 IEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDI 610

Query: 523 KSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           +SA   F +SC + ++  +N MI A++ +   V AL+ +  ++    +P++ + VS+++A
Sbjct: 611 QSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAA 670

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWE 638
           C  +G +  G ++   +   G + +  I   L+DM+S          +I +  Y    W 
Sbjct: 671 CGHIGHVEKGCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPY--PAWP 728

Query: 639 AI 640
           AI
Sbjct: 729 AI 730



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 189/394 (47%), Gaps = 20/394 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G       +++L+  +S     E +  +F    +++++ WN +I+    N C    L  F
Sbjct: 387 GLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTF 446

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            ++++ G+  +  T   ++   ++       R +H ++ K+G  +   +C+  +  Y KC
Sbjct: 447 YDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKC 506

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ S   F+ +   D  +W T++S  +H  +  + +     +  +GE+ D   L S +
Sbjct: 507 GLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSIL 566

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
           ++ A        K +H+L IKLG+E   +V V ++++  Y++CGDI++A+ AF   +CK 
Sbjct: 567 SSCASTVAYCQTKSVHSLIIKLGFEG--HVFVASAVLDAYAKCGDIQSAKMAF-NQSCKS 623

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            DVV +NA+I  +A +G+  EA D   +M+L  +++P  AT V++I+ C     + +G  
Sbjct: 624 SDVVIYNAMIIAYAHHGRVVEALDTYDKMKLA-NLQPSQATFVSVIAACGHIGHVEKG-- 680

Query: 300 VHGYAIRRLLGYDLLMMNS-------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                 R     DL  M         L+D +S++  L  A+ +  ++          S++
Sbjct: 681 -----CRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSLL 735

Query: 353 SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           SG          +++   LL ++P  ++  +L F
Sbjct: 736 SGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLF 769


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 194/625 (31%), Positives = 310/625 (49%), Gaps = 56/625 (8%)

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  GK IHA  ++ G   S Y+  TNSL+++Y++CG I  A+  F  +T KDVVSWN +
Sbjct: 25  DLQKGKAIHAQLLRTGSFSSVYL--TNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCL 82

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           I+G++  G    +F ++   Q MR+    P+  T   + +  + S     G   H  AI+
Sbjct: 83  INGYSQKGTVGYSF-VMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIK 141

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM------- 359
               YD+ + +SL++ Y K   +  A  +F+ I P  + VSW ++ISG   E        
Sbjct: 142 TSNFYDVFVGSSLINMYCKIGCMLDARKVFDTI-PERNTVSWATIISGYAMERMAFEAWE 200

Query: 360 LYLC--------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           L+L          +F ++++L+ L     P+ + +GK IHC  LK G  +     NAL+ 
Sbjct: 201 LFLLMRREEGAHDKFIYTSVLSAL---TVPDLVHYGKQIHCLALKNGLLSIASVGNALVT 257

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  AF   + +S + D   W+ +I    Q G   EA+  F +M    N  P  
Sbjct: 258 MYGKCGCLDDAFKTFE-LSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN-KPSE 315

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T V VI+AC ++    EGK +HG +LK+        +     +  +C  +  A   F+ 
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDY 375

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
               ++  W                +++ R +   P+E+++ S+L AC+ L  L  GKQI
Sbjct: 376 LKEPDIVLWTSC------------RMQMERIM---PHELTMASVLRACSSLAALEQGKQI 420

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           H      GF     I SAL  MY+ C               +    W++MIS    +G+G
Sbjct: 421 HAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEG 480

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +A+ELF E+ +   +P   + +++LSACSH GLV+ G  Y+  ML+E+ + P  EH+ C
Sbjct: 481 LKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYAC 540

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           +VD+L R+GKL E  EFI++  I     +W  +L AC ++ + ++G    E L +L  + 
Sbjct: 541 MVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQE 600

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              YI LS++Y ALGR  D   + +
Sbjct: 601 SSAYILLSSIYTALGRSDDVERVRR 625



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 243/531 (45%), Gaps = 57/531 (10%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           T+   L++G+ +H   ++ G  +   L N  VN+YAKCG +  ++  F  +   D VSWN
Sbjct: 21  TRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWN 80

Query: 144 TIMSGCLHNNYPEK-------CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
                CL N Y +K        +  F+ M       +  + S    A++   E   G   
Sbjct: 81  -----CLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135

Query: 197 HALGIKL-GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           HAL IK   + D   V V +SLI+MY + G +  A + F  +  ++ VSW  II G+A+ 
Sbjct: 136 HALAIKTSNFYD---VFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 192

Query: 256 GKFEEAFDLLHEMQLMRSVEP--DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
               EA++L     LMR  E   D     +++S      L+  G+ +H  A++  L    
Sbjct: 193 RMAFEAWELF---LLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + N+L+  Y K   L  A   F      +D ++W++MI+G            LF  M  
Sbjct: 250 SVGNALVTMYGKCGCLDDAFKTFELSGDKDD-ITWSAMITGYAQAGDSHEALNLFYNMHL 308

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             ++ S  T + ++ +C+   +LE GK IH + LK G+           ++   CG LV 
Sbjct: 309 NGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVD 368

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A      +    D   W     +C                 Q +   P  +T+ +V+ AC
Sbjct: 369 ARKGFDYLK-EPDIVLW----TSCRM---------------QMERIMPHELTMASVLRAC 408

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            +L    +GK +H   +K    L+  + +AL TMY +C  ++  + VF    + ++ TWN
Sbjct: 409 SSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWN 468

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK 589
            MIS  SQN   ++ALELF   RH   +P+ ++ V++LSAC+ +G++  GK
Sbjct: 469 AMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 519



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 247/546 (45%), Gaps = 26/546 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVEE 67
           + SL+  Y+       +  +F    NKDVV+WN +I    +   V     +  F  M  E
Sbjct: 48  TNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAE 107

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
               +  T   + +A +       G   H L+IK     D  + +  +NMY K G +  +
Sbjct: 108 NTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDA 167

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYP----EKCLLYFREMGWSGEQADNVSLSSAVAA 183
              F  +   +TVSW TI+SG           E  LL  RE G      D    +S ++A
Sbjct: 168 RKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEG----AHDKFIYTSVLSA 223

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
                 + YGK IH L +K G       SV N+L++MY +CG ++ A + F     KD +
Sbjct: 224 LTVPDLVHYGKQIHCLALKNGL--LSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDI 281

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W+A+I G+A  G   EA +L + M L    +P   T V +I+ C+D   L EG+ +HGY
Sbjct: 282 TWSAMITGYAQAGDSHEALNLFYNMHL-NGNKPSEFTFVGVINACSDIGALEEGKQIHGY 340

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
           +++      +          +K  SL  A   F+ +    D+V W S    + + M +  
Sbjct: 341 SLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKE-PDIVLWTSCRMQMERIMPHEL 399

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                 T+ ++L +C+S  +LE GK IH   +K GFS      +AL  MY  CG L    
Sbjct: 400 ------TMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGN 453

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            + +R+  + D   WN +I   +QNG   +A++ F+ + +     PD VT VNV+SAC +
Sbjct: 454 LVFRRMP-SRDIMTWNAMISGLSQNGEGLKALELFEEL-RHGTTKPDYVTFVNVLSACSH 511

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTW 540
           + L   GK    + L    G+  RV++   ++ +  R   +       ES   +  +C W
Sbjct: 512 MGLVERGKVYFRMMLDEF-GIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLW 570

Query: 541 NCMISA 546
             ++ A
Sbjct: 571 RILLGA 576



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 230/503 (45%), Gaps = 40/503 (7%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           + P   + V L+  C     L++G+++H   +R      + + NSL++ Y+K  S+ KA+
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 334 LLFNAIAPMNDLVSWNSMISG--------------LFKEML---YLCSQFSFSTLLAILP 376
           L+F +I    D+VSWN +I+G              LF+ M     L +  +FS +     
Sbjct: 66  LVFESITN-KDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           S  SPE+   G   H   +K     +    ++L++MY   G ++ A  +   I    +T 
Sbjct: 125 S--SPETFG-GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER-NTV 180

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I          EA + F  M +++ A  D     +V+SA    +L   GK +H L
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEGAH-DKFIYTSVLSALTVPDLVHYGKQIHCL 239

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           ALK+ +     V NAL+TMYG+C  +  A   FE   + +  TW+ MI+ ++Q      A
Sbjct: 240 ALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEA 299

Query: 557 LELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L LF ++     +P+E + V +++AC+ +G L  GKQIHG+    G++   +       +
Sbjct: 300 LNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYL 359

Query: 614 YSNCKSNAAWSSMISAY-GYHGKGWEAIELFH--EMCNSGIRPTKSSVISLLSACSHSGL 670
            + C       S++ A  G+       I L+    M    I P + ++ S+L ACS    
Sbjct: 360 KAKC------GSLVDARKGFDYLKEPDIVLWTSCRMQMERIMPHELTMASVLRACSSLAA 413

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           +++G Q +   + +Y    E      +  M  + G L++     + +P +     W AM+
Sbjct: 414 LEQGKQIHAQTI-KYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIM-TWNAMI 471

Query: 731 SACSHHGDTKMGKQVAELLFKLE 753
           S  S +G+   G +  EL  +L 
Sbjct: 472 SGLSQNGE---GLKALELFEELR 491



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 195/455 (42%), Gaps = 35/455 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+  Y  +     +  +F     ++ V+W  +I+     R        F  M  E   
Sbjct: 152 SSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGA 211

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D      ++SALT  + +  G+ +HCL++K G+++ +S+ N  V MY KCG L+ +  T
Sbjct: 212 HDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKT 271

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D ++W+ +++G        + L  F  M  +G +    +    + A + +G L
Sbjct: 272 FELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGAL 331

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK IH   +K GYE   Y         + ++CG +  A + F  +   D+V W +   
Sbjct: 332 EEGKQIHGYSLKAGYECQIYFR--KGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC-- 387

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
                            MQ+ R + P   T+ +++  C+    L +G+ +H   I+    
Sbjct: 388 ----------------RMQMER-IMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 430

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++ + ++L   Y+K  SL    L+F  + P  D+++WN+MISG            LF+E
Sbjct: 431 LEVPIGSALSTMYAKCGSLEDGNLVFRRM-PSRDIMTWNAMISGLSQNGEGLKALELFEE 489

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCG 417
           + +  ++  + T + +L +C+    +E GK      L + G          ++ +    G
Sbjct: 490 LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAG 549

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            L      ++  + +     W I++ AC    +++
Sbjct: 550 KLHETKEFIESATIDHGMCLWRILLGACRNYRNYE 584



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 21/297 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+      +L+T Y      + +   F  + +KD +TW+AMIT   +       L+ F
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G +    T + +++A + +  L++G+ +H  S+KAG          F  + AKC
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKC 363

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   D V W +             C +    +         ++++S +
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTS-------------CRMQMERI-----MPHELTMASVL 405

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK IHA  IK G+  S  V + ++L +MY++CG +E     F  M  +D
Sbjct: 406 RACSSLAALEQGKQIHAQTIKYGF--SLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 463

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           +++WNA+I G + NG+  +A +L  E++   + +PD  T V ++S C+   L+  G+
Sbjct: 464 IMTWNAMISGLSQNGEGLKALELFEELR-HGTTKPDYVTFVNVLSACSHMGLVERGK 519



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 1/128 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +P  ++L T Y+     E    +F    ++D++TWNAMI+   +N   +  L  F
Sbjct: 428 GFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELF 487

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAK 120
            E+     + D  T + ++SA + M  +++G+V   + +   G+I         V++ ++
Sbjct: 488 EELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSR 547

Query: 121 CGDLNSSE 128
            G L+ ++
Sbjct: 548 AGKLHETK 555


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 188/606 (31%), Positives = 294/606 (48%), Gaps = 106/606 (17%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D +    L+ LC      R+ RSVHG  I+     ++ + N L+D Y K   L  A  +F
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 337 N------------------------------AIAPMNDLVSWNSMISGL-----FKEML- 360
           +                              ++ P  D  SWNSMI+G      F+E L 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 361 ---------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
                    ++ + +SF + L+   +C+  + L+ G  IH    K  +S +    + L+ 
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLS---ACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLID 199

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y  CG +  A  +   +   +  S WN +I    QNG   EA++ F  MT+     PD 
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVS-WNCLITCYEQNGPAIEALEAFGRMTEL-GFKPDE 257

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRC----------- 519
           VTL +V+SAC  L    EG  +H   +KS     D  + NAL+ MY +C           
Sbjct: 258 VTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFD 317

Query: 520 --------------------RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                                 +K+A ++F +    ++ +WN +I+ ++QN     AL L
Sbjct: 318 RMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS------FISSAL 610
           FR L+ E   P   +  ++L+A   L  L  G+Q H HV   GF+  S      F+ ++L
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C               K + +W++MI  Y  +G G EA+ELF +M  SG +P  
Sbjct: 438 IDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDH 497

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            ++I  L ACSH+GLV+EG +Y+ +M +E+ + P  +H+ C+VD+LGR+G L+EA + I+
Sbjct: 498 VTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIE 557

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++P QP   VW ++LSAC  H +  +GK VAE +F+++P + G Y+ L+NMY  LGRW D
Sbjct: 558 SMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGD 617

Query: 776 AVEIGK 781
           AV + K
Sbjct: 618 AVSVRK 623



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 181/411 (44%), Gaps = 44/411 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + L+  YS       +  +F     K+VV+WN +IT   +N   +  L  FG M E G +
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSEC 129
            D  TL  +VSA   +   K+G  +H   +K+     D  L N  V+MYAKCG +N + C
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARC 314

Query: 130 TFSGMHC-------------------------------ADTVSWNTIMSGCLHNNYPEKC 158
            F  M                                  D VSWN +++G   N   E+ 
Sbjct: 315 VFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEA 374

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE----DSPYVSVT 214
           L  FR +        + +  + + ASA L +L  G+  H+  +K G+     + P + V 
Sbjct: 375 LGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVG 434

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           NSLI MY +CG +E   R F  M  KD VSWN +I G+A NG   EA +L  +M L    
Sbjct: 435 NSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKM-LESGE 493

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS----LMDFYSKSNSLS 330
           +PD  T++  +  C+ + L+ EGR    Y       + LL +      ++D   ++  L 
Sbjct: 494 KPDHVTMIGTLCACSHAGLVEEGRR---YFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLE 550

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSP 381
           +A+ L  ++    D V W+S++S           ++    +  I P+ + P
Sbjct: 551 EAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGP 601



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 236/561 (42%), Gaps = 95/561 (16%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN------ 125
           DS+    ++    ++   +  R VH   I+     +  + N  +++Y KCG L+      
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 126 -------------------------SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
                                     S   FS M   D  SWN++++G   ++  E+ L 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
           +F  M       ++ S  S ++A + L +L  G  IH L  K  Y  S  V + + LI  
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKY--SLDVFMGSGLIDF 200

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           YS+CG +  A R F GM  K+VVSWN +I  +  NG   EA +    M  +   +PD  T
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTEL-GFKPDEVT 259

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           + +++S CA     +EG  +H   ++      DL++ N+L+D Y+K   +++A  +F+ +
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319

Query: 340 APMN------------------------------DLVSWNSMISG--------------- 354
              N                              D+VSWN++I+G               
Sbjct: 320 PVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFR 379

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT-------IGVN 407
           + K      + ++F  LL    S N  + LE G+  H   +K GF   +       +G N
Sbjct: 380 MLKRESVCPTHYTFGNLLN--ASANLAD-LELGRQAHSHVVKHGFRFQSGEEPDIFVG-N 435

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY+ CG +     + + +      S WN +I+   QNG+  EA++ F+ M  +   
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMVEKDHVS-WNTMIIGYAQNGYGMEALELFQKML-ESGE 493

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSAS 526
            PD VT++  + AC +  L  EG+       K    L  +     ++ + GR   ++ A 
Sbjct: 494 KPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAK 553

Query: 527 TVFESC-YNCNLCTWNCMISA 546
            + ES     +   W+ ++SA
Sbjct: 554 DLIESMPKQPDAVVWSSLLSA 574



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 208/485 (42%), Gaps = 55/485 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S+++      + + S  LF     KD  +WN+MI    ++      L +F  M  +    
Sbjct: 95  SIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVL 154

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  +    +SA +++  LK G  +H L  K+    D  + +  ++ Y+KCG +  +   F
Sbjct: 155 NDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVF 214

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            GM   + VSWN +++ C   N P  + L  F  M   G + D V+L+S V+A A L   
Sbjct: 215 DGMEEKNVVSWNCLIT-CYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAF 273

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG------------------------- 225
             G  IHA  +K     +  + + N+L+ MY++CG                         
Sbjct: 274 KEGVQIHARVVKSDKFRNDLI-LGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVS 332

Query: 226 ------DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
                  ++AA   F  +  KD+VSWNA+I G+  NG+ EEA  L   ++   SV P   
Sbjct: 333 GYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK-RESVCPTHY 391

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLSKAE 333
           T   L++  A+   L  GR  H + ++    +      D+ + NSL+D Y K  S+ +  
Sbjct: 392 TFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGL 451

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F  +    D VSWN+MI G            LF++ML    +    T++  L +C+  
Sbjct: 452 RVFENMVE-KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHA 510

Query: 382 ESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +E G+       K  G          ++ +    G L  A  L++ +    D   W+ 
Sbjct: 511 GLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSS 570

Query: 441 VIVAC 445
           ++ AC
Sbjct: 571 LLSAC 575



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 56/293 (19%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           + T++++ Y+  +  +++ ++F     KD+V+WNA+I    +N      L  F  +  E 
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRES 385

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGR------VVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +     T   +++A   +  L+ GR      V H    ++G   D  + N  ++MY KCG
Sbjct: 386 VCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCG 445

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +      F  M   D VSWNT++ G   N Y  + L  F++M  SGE+ D+V++   + 
Sbjct: 446 SVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLC 505

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT---- 238
           A                                      S  G +E   R F+ MT    
Sbjct: 506 AC-------------------------------------SHAGLVEEGRRYFFSMTKEHG 528

Query: 239 ---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
               KD   +  ++D     G  EEA DL+  M      +PD     +L+S C
Sbjct: 529 LLPVKD--HYTCMVDLLGRAGCLEEAKDLIESM----PKQPDAVVWSSLLSAC 575


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 167/502 (33%), Positives = 273/502 (54%), Gaps = 38/502 (7%)

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAP-MNDLVSWNSMISGLFKEMLYL---------- 362
            + N+L++ Y+K   L++A LLF+        +V+W S+I+ L    ++L          
Sbjct: 178 FLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMR 237

Query: 363 CS-----QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           CS     QF+FS+   IL +  +   +  G+ +H    K GF  N     AL+ MY  C 
Sbjct: 238 CSGPYPNQFTFSS---ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCA 294

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D+ +A  +  ++   +  S WN +IV    N  +  A+  FK + +++   P+ V++ +V
Sbjct: 295 DMHSAVRVFDQMPERNLVS-WNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSV 353

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC N+     G+ +HG+ +K  +   T V N+L+ MY +CR       +F+   + ++
Sbjct: 354 LSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDV 413

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGH 594
            TWN ++  F QN     A   F  +  E   P+E S  ++L +   L  L  G  IH  
Sbjct: 414 VTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQ 473

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEA 639
           +  LG+ +N  I  +L+ MY+ C S                 +W++MISAY  HG   + 
Sbjct: 474 IIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQV 533

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           IELF  M + GI P+  + + +LSACSH+G V+EGL ++N+M + +D+ P  EH+ C+VD
Sbjct: 534 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 593

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR+G L EA  FI+++P++P P VWGA+L AC  +G+ KMG++ AE LF++EP N G 
Sbjct: 594 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 653

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           Y+ L+NM    GR ++A E+ +
Sbjct: 654 YVLLANMCTRSGRLEEANEVRR 675



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 255/537 (47%), Gaps = 35/537 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS--GMHC 136
           +++   Q   LK    +H   I     +   L N  +N+YAKCG LN +   FS    H 
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
              V+W ++++   H N   + L  F +M  SG   +  + SS ++ASA    + +G+ +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H+L  K G++ + +V    +L+ MY++C D+ +A R F  M  +++VSWN++I GF  N 
Sbjct: 268 HSLIHKHGFDANIFVGT--ALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
            ++ A  +  ++   ++V P+  +V +++S CA+   L  GR VHG  ++  L     +M
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY--------------- 361
           NSLMD Y K     +   LF  +    D+V+WN ++ G  +   +               
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           L  + SFST   +L S  S  +L  G +IH   +KLG+  N   + +L+ MY  CG LV 
Sbjct: 445 LPDEASFST---VLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A+ + + I  ++  S W  +I A   +G   + I+ F+ M   +   P  VT V V+SAC
Sbjct: 502 AYQVFEGIEDHNVIS-WTAMISAYQLHGCANQVIELFEHML-SEGIEPSHVTFVCVLSAC 559

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLC 538
            +     EG + H  ++K +  ++   ++   ++ + GR   +  A    ES        
Sbjct: 560 SHTGRVEEGLA-HFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPS 618

Query: 539 TWNCMISA---FSQNKAEVRALELFRHLEFEP-NEISIVSILSACTQLGVLRHGKQI 591
            W  ++ A   +   K    A E  R  E EP N  + V + + CT+ G L    ++
Sbjct: 619 VWGALLGACRKYGNLKMGREAAE--RLFEMEPYNPGNYVLLANMCTRSGRLEEANEV 673



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 242/510 (47%), Gaps = 37/510 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +L+  Y+       +L LF  T +  K +VTW ++IT        +  L  F +M   G 
Sbjct: 182 NLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGP 241

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  T   I+SA      +  G+ +H L  K G  A+  +    V+MYAKC D++S+  
Sbjct: 242 YPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVR 301

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLG 188
            F  M   + VSWN+++ G  HNN  ++ +  F+++        N VS+SS ++A A +G
Sbjct: 302 VFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 361

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L++G+ +H + +K G    P   V NSL+ MY +C   +   + F  +  +DVV+WN +
Sbjct: 362 GLNFGRQVHGVVVKYGL--VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 419

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           + GF  N KFEEA +    M+    + PD A+  T++   A    L +G ++H   I+  
Sbjct: 420 VMGFVQNDKFEEACNYFWVMR-REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK-- 476

Query: 309 LGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           LGY  ++ ++ SL+  Y+K  SL  A  +F  I   N ++SW +MIS             
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHN-VISWTAMISAYQLHGCANQVIE 535

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGFSNNTIGVN 407
           LF+ ML    + S  T + +L +C+    +E G       K IH   +  G  +    V+
Sbjct: 536 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH--DMNPGPEHYACMVD 593

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            L       G L  A   ++ +      S W  ++ AC + G+ +   +  + + + +  
Sbjct: 594 LLG----RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPY 649

Query: 468 SP-DSVTLVNVISACGNLELAFEGKSLHGL 496
           +P + V L N+ +  G LE A E + L G+
Sbjct: 650 NPGNYVLLANMCTRSGRLEEANEVRRLMGV 679



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 4/297 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A++   T+L+  Y+  +   S++ +F +   +++V+WN+MI     N      +  F
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +++ E+ +  +  ++  ++SA   M  L  GR VH + +K G++  + + N  ++MY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C   +     F  +   D V+WN ++ G + N+  E+   YF  M   G   D  S S+ 
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +SA L  L  G  IH   IKLGY  +  + +  SLI+MY++CG +  A + F G+   
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKN--MCILGSLITMYAKCGSLVDAYQVFEGIEDH 512

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +V+SW A+I  + L+G   +  +L   M L   +EP   T V ++S C+ +  + EG
Sbjct: 513 NVISWTAMISAYQLHGCANQVIELFEHM-LSEGIEPSHVTFVCVLSACSHTGRVEEG 568



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 54/258 (20%)

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------- 617
           +L+   Q   L+H  QIH  +    +    F+ + L+++Y+ C                 
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K+   W+S+I+   +     +A+ LF++M  SG  P + +  S+LSA + + +V  G Q 
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP------------------- 718
           + +++ ++           +VDM  +   +  A      +P                   
Sbjct: 268 H-SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326

Query: 719 ----------------IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI- 761
                           + P      ++LSAC++ G    G+QV  ++ K     + Y + 
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386

Query: 762 SLSNMYVALGRWKDAVEI 779
           SL +MY     + + V++
Sbjct: 387 SLMDMYFKCRFFDEGVKL 404



 Score = 42.7 bits (99), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 4/151 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G++ ++    SL+T Y+       +  +F    + +V++W AMI+A   + C    +  F
Sbjct: 478 GYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELF 537

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA--GMIADSSLCNVFVNMYA 119
             M+ EGI     T + ++SA +    +++G + H  S+K    M          V++  
Sbjct: 538 EHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKKIHDMNPGPEHYACMVDLLG 596

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGC 149
           + G L+ ++     M    T S W  ++  C
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGAC 627


>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
 gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
          Length = 721

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 314/625 (50%), Gaps = 52/625 (8%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S+ + +H   +KLG   S Y+   N+L+  Y   G +  A   F  M  ++VVSW+ +I 
Sbjct: 19  SHPRAVHGAAVKLGCLASTYL--CNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIA 76

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVE---PDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
             +  G   +A  L   M  +R  E   P+  TV  L++ CA +     G  VH  A++ 
Sbjct: 77  ASSRLGVLGDALSLFAGM--LRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKL 134

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--------SG----- 354
            +  D  +  +L+D Y+K   +  +   F  + P   ++SW SMI        SG     
Sbjct: 135 GVDEDESVAGTLVDMYAKCGRVGSSWRAF-VLTPQRSVLSWTSMIACLVNHGDSGYRDTA 193

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LFK+ML L    + +T   IL   + PE L  GK +H   +K+G   +     AL+ M
Sbjct: 194 IVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAM 253

Query: 413 YINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           Y  CG +     L  RI H+  S TS    ++ A  +NG   EA++ F+ M         
Sbjct: 254 YGRCGGMDEITRLACRIRHDAFSRTS----LLTAYARNGCNMEAVRVFRDMLMGHMPIDQ 309

Query: 471 S--VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           S   +L+ V S+ G L +    K +H  ALK+   LDT + NA++T+YG+C DI S+  V
Sbjct: 310 SAITSLLQVCSSLGQLRVV---KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           F +  N +  +W  +++ + QN     AL  FR +     E +   I S+L AC+    L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G QIH  V  LG  +++ + +AL+ MY+ C               +   +W+++I+++
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSF 486

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG    AI+LF  M    + P   + + LLS+CS  GLV EG +Y+  M  +Y++ P+
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+  R+G+  +A +FI  +P QP   VW A+L++C  HG+  +G+  A+ + 
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL 606

Query: 751 KLEPENVGYYISLSNMYVALGRWKD 775
           +++PE+   YI LS+++ ++  W +
Sbjct: 607 EIKPEDPSPYIILSSIHASIDMWDE 631



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 180/747 (24%), Positives = 327/747 (43%), Gaps = 102/747 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LH 59
           G LA      +LL +Y    +   +  +F E   ++VV+W+ +I A   +R  V+G  L 
Sbjct: 32  GCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAA--SSRLGVLGDALS 89

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F  M+  G   R +S T+  +V+   +      G  VH  ++K G+  D S+    V+M
Sbjct: 90  LFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDM 149

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN----YPEKCLLYFREMGWSGEQAD 173
           YAKCG + SS   F        +SW T M  CL N+    Y +  ++ F++M        
Sbjct: 150 YAKCGRVGSSWRAFVLTPQRSVLSW-TSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPT 208

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           N + S  +        L  GK +H   +K+G E  P  ++  +L++MY +CG ++   R 
Sbjct: 209 NATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDP--ALGTALLAMYGRCGGMDEITR- 265

Query: 234 FWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
              + C+   D  S  +++  +A NG   EA  +  +M LM  +  D + + +L+ +C+ 
Sbjct: 266 ---LACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVCSS 321

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              LR  + +H YA++     D L++N+++  Y K   ++ +E++FN +    D +SW +
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLEN-KDTISWTA 380

Query: 351 MIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           +++              F+EM+    + S   + ++L +C++  SL  G  IH   +KLG
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             ++T   NAL+ MY  CG +  A  +   +  N     WN +I + +Q+G+   AI+ F
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSM-RNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M Q++   PD  T V ++S+C  + L  EG                            
Sbjct: 500 -DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEG---------------------------- 530

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
           C   K   T +       +  + CM+  F++      A++    +  +P+++   ++L++
Sbjct: 531 CEYFKQMKTKYN--LEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENS---FISS--ALLDMYSNCKSNAAW---------- 623
           C   G L  G+     +  +  ++ S    +SS  A +DM+     N             
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARNRTLLDFQQLRKDV 648

Query: 624 -SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
            SS + + G+    + A++ F+     G R      +S+  ACS +    +      NM 
Sbjct: 649 GSSQLDSQGFSDDIFNALQPFYPTLGQGRRG-----VSIELACSWANSWQQ-----QNMT 698

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQE 709
           EE          + +  MLG+ G + E
Sbjct: 699 EE----------LLVAAMLGQEGAVLE 715



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 292/617 (47%), Gaps = 46/617 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VH  ++K G +A + LCN  +  Y   G L  +   F  M   + VSW+ +++     
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 153 NYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 L  F  M   GE  + ++ ++++ VA  A   +   G+ +HA  +KLG ++   
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDE- 140

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK--FEEAFDLLHEM 268
            SV  +L+ MY++CG + ++ RAF     + V+SW ++I     +G   + +   +L + 
Sbjct: 141 -SVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKK 199

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L+  V P  AT   ++ +     LL  G+ VHG  ++     D  +  +L+  Y +   
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           + +   L  A    +D  S  S+++             +F++ML        S + ++L 
Sbjct: 260 MDEITRL--ACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQ 317

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            C+S   L   K IHC+ LK  F  +T+ +NA++ +Y  CGD +A+  ++     N DT 
Sbjct: 318 VCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD-IASSEIVFNTLENKDTI 376

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  ++    QN   QEA+  F+ M ++   S     + +V+ AC        G  +H  
Sbjct: 377 SWTALLTCYVQNDLSQEALFFFREMVRKGLES-SIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K  +  DT V+NAL+TMY +C  ++ A  +F S  N  + +WN +I++FSQ+  EV A
Sbjct: 436 VVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAA 495

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           ++LF  ++ E   P++ + V +LS+C+++G++  G +         F++       +   
Sbjct: 496 IQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEY--------FKQ-------MKTK 540

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           Y+       ++ M+  +   G+  +A++    M     +P +    +LL++C   G +D 
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597

Query: 674 GLQYYNNMLEEYDVRPE 690
           G      +LE   ++PE
Sbjct: 598 GRMAAKKILE---IKPE 611


>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
 gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
          Length = 660

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 185/663 (27%), Positives = 323/663 (48%), Gaps = 47/663 (7%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI- 196
           + V+WN  +     +      L  FR +   G   D V+  +A   +    E  Y +   
Sbjct: 6   NVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTFINASQGAKTPPEAKYLETCR 65

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
              G++L       +++ N+LI+M+        A R F     K++VSWNA++  ++ NG
Sbjct: 66  QESGVQLD------IALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNG 119

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
            FEE   L  +M   ++V+PD  T  +++S CA+   LREG+  H  A+   L + + + 
Sbjct: 120 HFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVA 179

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCS 364
            +L+  YSK + L +A  +F+  +P +D+V+W  MIS             LF  M     
Sbjct: 180 ATLIQMYSKCHCLEEARDIFSR-SPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVPPD 238

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
             +F+T L    +C S E+LE G+ +    ++LG        NA++ +Y  C ++V    
Sbjct: 239 GVAFATALG---ACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAE 295

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV----NVISA 480
           +  R+    D   WN ++ A  + GH   ++  F++M Q +   P  V+LV    +V+S+
Sbjct: 296 IFGRMRQR-DRVSWNTMVAAYARAGHTAGSLWCFRAM-QLEGVCPSEVSLVSSFTSVLSS 353

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C NLE   EGK  H  A+++ +     V   LI MY +C  ++ A  +F    + ++  W
Sbjct: 354 CANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAW 413

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
             MISA++QN     A+ LF  +   P+ +   + L AC +   L  G  +   +  LG 
Sbjct: 414 TVMISAYAQNGRPQEAIALFFRITVPPDGVGFATALEACARAENLEAGV-VRAKIVELGL 472

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
                ++ A+LD+Y  C               +   +W++M++AY   G    ++  F  
Sbjct: 473 DAERAVADAVLDLYGKCAEIVETAEIFDRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRA 532

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G+ P++ S++S+LS  SH+GLV++G Q + ++  +Y + P  E   C+VD+LGR+G
Sbjct: 533 MQLEGVCPSEVSLVSVLSTYSHAGLVEQGCQCFASIASDYGMVPSREQQGCVVDLLGRAG 592

Query: 706 KLQEAYEFIKNL-PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
               A + I+ + P      +W A+LS+C  H D ++G   A  + +++P +   +I LS
Sbjct: 593 SWI-AEDLIRVVAPSTSSSELWKAVLSSCRIHSDVELGDCAAACVLEMDPGSDSAHIILS 651

Query: 765 NMY 767
           N+Y
Sbjct: 652 NIY 654



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 170/640 (26%), Positives = 294/640 (45%), Gaps = 57/640 (8%)

Query: 33  TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG 92
           T   +VVTWNA I A   +R     L  F  ++ +G+  D+ T    ++A        + 
Sbjct: 2   TDKTNVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTF---INASQGAKTPPEA 58

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           + +     ++G+  D +L N  +NM+        +   F   H  + VSWN ++S    N
Sbjct: 59  KYLETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQN 118

Query: 153 NYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            + E+ +  F++M  +   + D ++ +S +++ A L  L  GK+ HA  ++ G E +  V
Sbjct: 119 GHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFA--V 176

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V  +LI MYS+C  +E A   F      DVV+W  +I  +A NG+ +EA  L   M   
Sbjct: 177 PVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRM--- 233

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            +V PD     T +  CA +  L  GR V    +   L  +  + N+++D Y K   + +
Sbjct: 234 -TVPPDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVE 292

Query: 332 AELLFNAIAPMNDLVSWNSMISGL------------FKEMLY--LC-SQFSF-STLLAIL 375
              +F  +    D VSWN+M++              F+ M    +C S+ S  S+  ++L
Sbjct: 293 TAEIFGRMR-QRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVL 351

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            SC + E+L  GK  H   ++ G          L+ MY  C  L  A  +  R S +SD 
Sbjct: 352 SSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSR-SPSSDV 410

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W ++I A  QNG  QEAI  F  +T      PD V     + AC   E   E   +  
Sbjct: 411 VAWTVMISAYAQNGRPQEAIALFFRIT----VPPDGVGFATALEACARAE-NLEAGVVRA 465

Query: 496 LALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
             ++  +GLD    V +A++ +YG+C +I   + +F+     +  +WN M++A+++    
Sbjct: 466 KIVE--LGLDAERAVADAVLDLYGKCAEIVETAEIFDRMRQRDRVSWNTMVAAYARAGHT 523

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG----------------KQIHGH 594
             +L  FR ++ E   P+E+S+VS+LS  +  G++  G                ++  G 
Sbjct: 524 AGSLWCFRAMQLEGVCPSEVSLVSVLSTYSHAGLVEQGCQCFASIASDYGMVPSREQQGC 583

Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAA-WSSMISAYGYH 633
           V  L  +  S+I+  L+ + +   S++  W +++S+   H
Sbjct: 584 VVDLLGRAGSWIAEDLIRVVAPSTSSSELWKAVLSSCRIH 623



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 240/504 (47%), Gaps = 23/504 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMN 87
           +F  T NK++V+WNAM++A  +N      +  F +M   + ++ D  T   ++S+   + 
Sbjct: 96  VFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLE 155

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L++G++ H  +++AG+     +    + MY+KC  L  +   FS    +D V+W  ++S
Sbjct: 156 NLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMIS 215

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
               N  P++ +  F  M       D V+ ++A+ A A    L  G+V+ A  ++LG + 
Sbjct: 216 AYAQNGRPQEAIALFFRMTVP---PDGVAFATALGACASAENLEAGRVVRAQIVELGLDA 272

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
               +V N+++ +Y +C +I      F  M  +D VSWN ++  +A  G    +      
Sbjct: 273 ER--AVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRA 330

Query: 268 MQLMRSVEPDIATV---VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           MQL      +++ V    +++S CA+   LREG+  H  A+   L + + +  +L+  YS
Sbjct: 331 MQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYS 390

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFST----LLAIL 375
           K + L +A  +F+  +P +D+V+W  MIS     G  +E + L  + +           L
Sbjct: 391 KCHCLEEARDIFSR-SPSSDVVAWTVMISAYAQNGRPQEAIALFFRITVPPDGVGFATAL 449

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C   E+LE G  +    ++LG        +A++ +Y  C ++V    +  R+    D 
Sbjct: 450 EACARAENLEAG-VVRAKIVELGLDAERAVADAVLDLYGKCAEIVETAEIFDRMRQR-DR 507

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG-KSLH 494
             WN ++ A  + GH   ++  F++M Q +   P  V+LV+V+S   +  L  +G +   
Sbjct: 508 VSWNTMVAAYARAGHTAGSLWCFRAM-QLEGVCPSEVSLVSVLSTYSHAGLVEQGCQCFA 566

Query: 495 GLALKSLMGLDTRVQNALITMYGR 518
            +A    M      Q  ++ + GR
Sbjct: 567 SIASDYGMVPSREQQGCVVDLLGR 590



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 163/355 (45%), Gaps = 15/355 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +P + +L+  YS     E +  +F  + + DVV W  MI+A  +N      +  F  M  
Sbjct: 176 VPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMT- 234

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
             +  D       + A      L+ GRVV    ++ G+ A+ ++ N  +++Y KC ++  
Sbjct: 235 --VPPDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVE 292

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL----SSAVA 182
           +   F  M   D VSWNT+++      +    L  FR M   G     VSL    +S ++
Sbjct: 293 TAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLS 352

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           + A L  L  GK+ HA  ++ G E +  V V  +LI MYS+C  +E A   F      DV
Sbjct: 353 SCANLENLREGKLAHAAAVEAGLEFA--VPVAATLIQMYSKCHCLEEARDIFSRSPSSDV 410

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           V+W  +I  +A NG+ +EA  L   +    +V PD     T +  CA +  L  G  V  
Sbjct: 411 VAWTVMISAYAQNGRPQEAIALFFRI----TVPPDGVGFATALEACARAENLEAG-VVRA 465

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
             +   L  +  + ++++D Y K   + +   +F+ +    D VSWN+M++   +
Sbjct: 466 KIVELGLDAERAVADAVLDLYGKCAEIVETAEIFDRMR-QRDRVSWNTMVAAYAR 519


>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
          Length = 671

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 191/625 (30%), Positives = 314/625 (50%), Gaps = 52/625 (8%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S+ + +H   +KLG   S Y+   N+L+  Y   G +  A   F  M  ++VVSW+ +I 
Sbjct: 19  SHPRAVHGAAVKLGCLASTYL--CNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIV 76

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVE---PDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
             +  G   +A  L   M  +R  E   P+  TV  L++ CA +     G  VH  A++ 
Sbjct: 77  ASSRLGVLGDALSLFAGM--LRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKL 134

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--------SG----- 354
            +  D  +  +L+D Y+K   +  +   F  + P   ++SW SMI        SG     
Sbjct: 135 GVDEDESVAGTLVDMYAKCGRVGSSWRAF-VLTPQRSVLSWTSMIACLVNHGDSGYRDTA 193

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LFK+ML L    + +T   IL   + PE L  GK +H   +K+G   +     AL+ M
Sbjct: 194 IVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAM 253

Query: 413 YINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           Y  CG +     L  RI H+  S TS    ++ A  +NG   EA++ F+ M         
Sbjct: 254 YGRCGGMDEITRLACRIRHDAFSRTS----LLTAYARNGCNMEAVRVFRDMLMGHMPIDQ 309

Query: 471 S--VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           S   +L+ V S+ G L +    K +H  ALK+   LDT + NA++T+YG+C DI S+  V
Sbjct: 310 SAITSLLQVCSSLGQLRVV---KEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIV 366

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           F +  N +  +W  +++ + QN     AL  FR +     E +   I S+L AC+    L
Sbjct: 367 FNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSL 426

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             G QIH  V  LG  +++ + +AL+ MY+ C               +   +W+++I+++
Sbjct: 427 SCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSF 486

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG    AI+LF  M    + P   + + LLS+CS  GLV EG +Y+  M  +Y++ P+
Sbjct: 487 SQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPK 546

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH+ C+VD+  R+G+  +A +FI  +P QP   VW A+L++C  HG+  +G+  A+ + 
Sbjct: 547 MEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKIL 606

Query: 751 KLEPENVGYYISLSNMYVALGRWKD 775
           +++PE+   YI LS+++ ++  W +
Sbjct: 607 EIKPEDPSPYIILSSIHASIDMWDE 631



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 291/617 (47%), Gaps = 46/617 (7%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R VH  ++K G +A + LCN  +  Y   G L  +   F  M   + VSW+ ++      
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81

Query: 153 NYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 L  F  M   GE  + ++ ++++ VA  A   +   G+ +HA  +KLG ++   
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDE- 140

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK--FEEAFDLLHEM 268
            SV  +L+ MY++CG + ++ RAF     + V+SW ++I     +G   + +   +L + 
Sbjct: 141 -SVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKK 199

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L+  V P  AT   ++ +     LL  G+ VHG  ++     D  +  +L+  Y +   
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           + +   L  A    +D  S  S+++             +F++ML        S + ++L 
Sbjct: 260 MDEITRL--ACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQ 317

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            C+S   L   K IHC+ LK  F  +T+ +NA++ +Y  CGD +A+  ++     N DT 
Sbjct: 318 VCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGD-IASSEIVFNTLENKDTI 376

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  ++    QN   QEA+  F+ M ++   S     + +V+ AC        G  +H  
Sbjct: 377 SWTALLTCYVQNDLSQEALFFFREMVRKGLES-SIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K  +  DT V+NAL+TMY +C  ++ A  +F S  N  + +WN +I++FSQ+  EV A
Sbjct: 436 VVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAA 495

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           ++LF  ++ E   P++ + V +LS+C+++G++  G +         F++       +   
Sbjct: 496 IQLFDMMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEY--------FKQ-------MKTK 540

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
           Y+       ++ M+  +   G+  +A++    M     +P +    +LL++C   G +D 
Sbjct: 541 YNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAM---PCQPDQLVWEALLASCRVHGNLDL 597

Query: 674 GLQYYNNMLEEYDVRPE 690
           G      +LE   ++PE
Sbjct: 598 GRMAAKKILE---IKPE 611



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 160/647 (24%), Positives = 292/647 (45%), Gaps = 71/647 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LH 59
           G LA      +LL +Y    +   +  +F E   ++VV+W+ +I A   +R  V+G  L 
Sbjct: 32  GCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVA--SSRLGVLGDALS 89

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F  M+  G   R +S T+  +V+   +      G  VH  ++K G+  D S+    V+M
Sbjct: 90  LFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDM 149

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN----YPEKCLLYFREMGWSGEQAD 173
           YAKCG + SS   F        +SW T M  CL N+    Y +  ++ F++M        
Sbjct: 150 YAKCGRVGSSWRAFVLTPQRSVLSW-TSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPT 208

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           N + S  +        L  GK +H   +K+G E  P  ++  +L++MY +CG ++   R 
Sbjct: 209 NATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDP--ALGTALLAMYGRCGGMDEITR- 265

Query: 234 FWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
              + C+   D  S  +++  +A NG   EA  +  +M LM  +  D + + +L+ +C+ 
Sbjct: 266 ---LACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDM-LMGHMPIDQSAITSLLQVCSS 321

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              LR  + +H YA++     D L++N+++  Y K   ++ +E++FN +    D +SW +
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLEN-KDTISWTA 380

Query: 351 MISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           +++              F+EM+    + S   + ++L +C++  SL  G  IH   +KLG
Sbjct: 381 LLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLG 440

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             ++T   NAL+ MY  CG +  A  +    + N     WN +I + +Q+G+   AI+ F
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNS-TRNRGIISWNALITSFSQHGNEVAAIQLF 499

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M Q++   PD  T V ++S+C  + L  EG                            
Sbjct: 500 -DMMQEEMVCPDDYTFVGLLSSCSRMGLVAEG---------------------------- 530

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
           C   K   T +       +  + CM+  F++      A++    +  +P+++   ++L++
Sbjct: 531 CEYFKQMKTKYN--LEPKMEHYTCMVDLFARAGRFSDAMKFIDAMPCQPDQLVWEALLAS 588

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENS---FISS--ALLDMYSNCKSN 620
           C   G L  G+     +  +  ++ S    +SS  A +DM+     N
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKARN 635


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 212/728 (29%), Positives = 353/728 (48%), Gaps = 63/728 (8%)

Query: 109 SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGW 167
           S C+ F+   ++   L  ++  F      D +SW+ +++      N+ +   L+ + MG 
Sbjct: 56  SACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMG- 114

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGD 226
            G Q +  SL+S +  S   GE+   + +H   I+ G+  DS    +  + I+MYS+CG 
Sbjct: 115 EGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDS---GIRAAWITMYSRCGV 171

Query: 227 IEAAERAF--WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           +E A+R F    +   D++ WN+II  +  +G + E   L  +M  +  V P   T  ++
Sbjct: 172 LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASV 231

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           ++ C  S   + G  VHG  I+  L    L  NSL+ FY K  +L  A  LF  I+   D
Sbjct: 232 VNACGSSGEEKYGAMVHGRIIKAGLEATNLW-NSLVTFYGKCGNLQHASQLFERIS-RKD 289

Query: 345 LVSWNSMIS------------GLFKEMLYLCS--QFSFSTLLAILPSCNSPESLEFGKSI 390
           +VSWN+MI+            GLF+ ML +    Q +  T L++L + +   +L  G+ I
Sbjct: 290 VVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI 349

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H    +L    +T   N+L+  Y  C ++  A  + +R+    D   WN ++    QN  
Sbjct: 350 HAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLR-DIISWNSMLAGYEQNEQ 408

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGN----LELAFEGKSLHGLALKSLM--GL 504
                  FK M       PDS +L  + +A       L     GK +HG  L+ +   G+
Sbjct: 409 QGRCFDIFKRMMLS-GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGV 467

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
              V NA++ MY +   I  A  +F+   N +  +WN M+  +S+N      L +F  + 
Sbjct: 468 SLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDIL 527

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL------GFQENSF-ISSALLDMY 614
              F  + +S+  +L++C +L  L+ GKQ H  V  L        Q++   I++AL+ MY
Sbjct: 528 KQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMY 587

Query: 615 SNCKS--NAA-------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C S  +AA             W++MI+   +HG   EA++LF  M   GI+P + + +
Sbjct: 588 SKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFL 647

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +LL AC+H GLV EG  Y+++M  +Y + P  EH+ C++D+ GRSG+   A   ++    
Sbjct: 648 ALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGIT 707

Query: 720 QPKP------GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
             KP       +W  +L AC       +G + A  + +LEPE+   YI L+N+Y + G W
Sbjct: 708 LFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLW 767

Query: 774 KDAVEIGK 781
           +DA+++ K
Sbjct: 768 EDAIKVRK 775



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 193/752 (25%), Positives = 352/752 (46%), Gaps = 62/752 (8%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+      +  L + S     + +  LF    N+DV++W+A+I A             F 
Sbjct: 51  FIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQ 110

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           +M+ EG++ +  +L  ++        +   R +H  SI+ G   DS +   ++ MY++CG
Sbjct: 111 KMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCG 170

Query: 123 DLNSSECTF--SGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            L  ++  F  + +   D + WN+I++    H  + E   L+ + +         ++ +S
Sbjct: 171 VLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYAS 230

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            V A    GE  YG ++H   IK G E +   ++ NSL++ Y +CG+++ A + F  ++ 
Sbjct: 231 VVNACGSSGEEKYGAMVHGRIIKAGLEAT---NLWNSLVTFYGKCGNLQHASQLFERISR 287

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGR 298
           KDVVSWNA+I      G+ E A  L   M ++   V+P+  T ++L+S  +    LR GR
Sbjct: 288 KDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGR 347

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            +H +  R  L  D  + NSL+ FYSK   + KA  +F  +  + D++SWNSM++G    
Sbjct: 348 EIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLL-LRDIISWNSMLAGYEQN 406

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPES----LEFGKSIHCWQL-KLGFSN 401
                   +FK M+    +    +L  I  + +   S       GK IH + L ++    
Sbjct: 407 EQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGG 466

Query: 402 NTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            ++ V NA++ MY     +  A  + + +  N D+  WN ++   ++N  F++ +  F  
Sbjct: 467 VSLSVSNAILKMYAKFNRIADAEKIFKGMK-NRDSYSWNAMMDGYSRNAKFEDVLMIFLD 525

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD-------TRVQNALI 513
           +  +Q    D V+L  ++++CG L     GK  H +  K   G D         + NALI
Sbjct: 526 IL-KQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALI 584

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
           +MY +C  IK A+ VF      ++ +W  MI+  + +   V AL+LF  ++    +PN++
Sbjct: 585 SMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQV 644

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAY 630
           + +++L AC   G++               QE S+   ++ + Y    S   ++ MI  +
Sbjct: 645 TFLALLMACAHGGLV---------------QEGSYYFDSMYNDYGLSPSIEHYACMIDLF 689

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVIS----LLSACSHSGLVDEGLQYYNNMLEEYD 686
           G  G+   A  L  E   +  +P    +++    LL AC  S  +D G++    +LE   
Sbjct: 690 GRSGQFDRAKSLV-EFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILE--- 745

Query: 687 VRPETEH-HVCIVDMLGRSGKLQEAYEFIKNL 717
           + PE E  ++ + ++   SG  ++A +  K +
Sbjct: 746 LEPEDEATYILLANLYASSGLWEDAIKVRKAM 777


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 191/626 (30%), Positives = 313/626 (50%), Gaps = 53/626 (8%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           +H L I  G +   +  VTNSL + Y++      +A + F     +DV S+N I+     
Sbjct: 59  LHGLAIASGLD--AFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPD 116

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG----RSVHGYAIRRLLG 310
            G   EA      M     V PD  T+   +SL A S    +G    R +H  A R  L 
Sbjct: 117 RG---EALAFAAWMLRSGDVRPDAVTLTVALSLAA-SRGEADGVWIVRQLHALASRSGLV 172

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--------MLYL 362
            D+ + N+L+  YS+   L  A  +F+ + P  DLVSWN+MI GL ++        +++L
Sbjct: 173 ADVFVGNALVTAYSRGALLGAARRVFDEM-PARDLVSWNAMICGLAQDGDCPTEVILVFL 231

Query: 363 --------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
                     +    ++ +++P+C S   +E G+ +H + +KLG        N L+ MY 
Sbjct: 232 RLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYY 291

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G    A  LL+ +    D   W   I   + +G  ++AI+ F  M +Q    P+ VT 
Sbjct: 292 KSGAAGCARKLLKSMDER-DVISWTTAI---SMDGE-EDAIELFNGM-RQDGVPPNEVTF 345

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V ++SA      A  G+ +H + LK+ +  +    N+LITMY + R +  A TVF+    
Sbjct: 346 VALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPR 405

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGV--LRHGKQ 590
             +  WN +IS ++QN+    AL++F  +     PNE +  S+LSA T +    + +G+ 
Sbjct: 406 PEIIAWNALISGYAQNELCNEALQVFSCMVRCLRPNETTFASVLSAVTAVETVSMAYGEM 465

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
            H     LG + + ++S AL+DMY+                 +S  AW+++ISA+  HG 
Sbjct: 466 YHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGN 525

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
               + LF +M  SG+ P    ++S+L+AC HSG V+ G + +++M  E+ V P  EH+ 
Sbjct: 526 YDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYA 585

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++DMLGR+G+L+EA E +  +P  P      ++L AC  HG+T + ++VA +L + EP 
Sbjct: 586 CVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERVAGILTETEPT 645

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
             G Y+ LSN+Y   G W    ++ +
Sbjct: 646 ESGAYVLLSNIYAEKGDWGGVAKVRR 671



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 241/495 (48%), Gaps = 37/495 (7%)

Query: 10  STSLLTAYS-NVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           + SL   Y+ + S F S+  +F+    +DV ++N +++A  +       L F   M+  G
Sbjct: 75  TNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRG---EALAFAAWMLRSG 131

Query: 69  -IRFDSTTLLIIVSALTQMNCLKQG----RVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
            +R D+ TL + +S L        G    R +H L+ ++G++AD  + N  V  Y++   
Sbjct: 132 DVRPDAVTLTVALS-LAASRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGAL 190

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREM---GWSGEQADNVSLSS 179
           L ++   F  M   D VSWN ++ G   + + P + +L F  +   G +  + D +S+ S
Sbjct: 191 LGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCS 250

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A    G++  G+ +H+  +KLG E    VS+ N L++MY + G    A +    M  
Sbjct: 251 VIPACGSEGKIELGRQVHSFTVKLGVEGK--VSIGNVLVAMYYKSGAAGCARKLLKSMDE 308

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +DV+SW   I   +++G+ E+A +L + M+    V P+  T V L+S  A     R G+ 
Sbjct: 309 RDVISWTTAI---SMDGE-EDAIELFNGMR-QDGVPPNEVTFVALMSALAAGCPARYGQM 363

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +H   ++  +  +    NSL+  Y+K   +  A  +F+ + P  ++++WN++ISG     
Sbjct: 364 IHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRM-PRPEIIAWNALISGYAQNE 422

Query: 355 LFKEMLYL------CSQFSFSTLLAILPSCNSPE--SLEFGKSIHCWQLKLGFSNNTIGV 406
           L  E L +      C + + +T  ++L +  + E  S+ +G+  HC  LKLG   +    
Sbjct: 423 LCNEALQVFSCMVRCLRPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVS 482

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            AL+ MY   G L  +        H S  + W  +I A  ++G++   +  F  M     
Sbjct: 483 GALIDMYAKRGSLEESRKAFDVTVHRSLIA-WTAIISAHAKHGNYDTVMNLFDDMV-CSG 540

Query: 467 ASPDSVTLVNVISAC 481
            +PD V L++V++AC
Sbjct: 541 VAPDGVVLLSVLTAC 555



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 195/408 (47%), Gaps = 29/408 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
           G +A +    +L+TAYS  +   ++  +F E   +D+V+WNAMI    ++  C    +  
Sbjct: 170 GLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILV 229

Query: 61  FGEMVEEG---IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           F  ++++G   +R D  ++  ++ A      ++ GR VH  ++K G+    S+ NV V M
Sbjct: 230 FLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAM 289

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G    +      M   D +SW T +S     +  E  +  F  M   G   + V+ 
Sbjct: 290 YYKSGAAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMRQDGVPPNEVTF 345

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + ++A A      YG++IH + +K G  D    +  NSLI+MY++   ++ A   F  M
Sbjct: 346 VALMSALAAGCPARYGQMIHTVCLKTGVSDE--AAAANSLITMYAKLRRMDDARTVFDRM 403

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLRE 296
              ++++WNA+I G+A N    EA  +   M + +R  E   A+V++ ++   +++ +  
Sbjct: 404 PRPEIIAWNALISGYAQNELCNEALQVFSCMVRCLRPNETTFASVLSAVT-AVETVSMAY 462

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G   H  +++  L     +  +L+D Y+K  SL ++   F+ +     L++W ++IS   
Sbjct: 463 GEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFD-VTVHRSLIAWTAIISAHA 521

Query: 355 ----------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSI 390
                     LF +M  +CS  +     LL++L +C    ++  G+ I
Sbjct: 522 KHGNYDTVMNLFDDM--VCSGVAPDGVVLLSVLTACRHSGAVNTGREI 567



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 225/524 (42%), Gaps = 56/524 (10%)

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A  LL  +    S  P +A+     +    S +     ++HG AI   L     + NSL 
Sbjct: 20  AHHLLDRIPRPTSTLPLLASSPAAFTAAVPSSVPANLPALHGLAIASGLDAFSFVTNSLA 79

Query: 321 DFYSKS-NSLSKAELLFNAIAPMNDLVSWNSMISGLFK--EMLYLCS-----------QF 366
             Y+KS +S   A  +F+  A   D+ S+N+++S L    E L   +             
Sbjct: 80  ARYAKSASSFPSAAKVFH-TARARDVSSYNTILSALPDRGEALAFAAWMLRSGDVRPDAV 138

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           + +  L++  S    + +   + +H    + G   +    NAL+  Y     L AA  + 
Sbjct: 139 TLTVALSLAASRGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVF 198

Query: 427 QRISHNSDTSCWNIVIVACTQNGH-FQEAIKTFKSMTQQQNAS--PDSVTLVNVISACGN 483
             +    D   WN +I    Q+G    E I  F  + +   A+  PD +++ +VI ACG+
Sbjct: 199 DEMPAR-DLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGS 257

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
                 G+ +H   +K  +G++ +V   N L+ MY +      A  + +S    ++ +W 
Sbjct: 258 EGKIELGRQVHSFTVK--LGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWT 315

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
             IS       E  A+ELF   R     PNE++ V+++SA       R+G+ IH      
Sbjct: 316 TAISM----DGEEDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKT 371

Query: 599 GFQENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELF 643
           G  + +  +++L+ MY+  +                  AW+++IS Y  +    EA+++F
Sbjct: 372 GVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVF 431

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML--EEYDVRPETEHHV--CIVD 699
             M    +RP +++  S+LSA +    V+     Y  M   +   +  +   +V   ++D
Sbjct: 432 SCMVRC-LRPNETTFASVLSAVT---AVETVSMAYGEMYHCQSLKLGLKVSEYVSGALID 487

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG--DTKM 741
           M  + G L+E+ +   ++ +      W A++SA + HG  DT M
Sbjct: 488 MYAKRGSLEESRKAF-DVTVHRSLIAWTAIISAHAKHGNYDTVM 530


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 286/530 (53%), Gaps = 37/530 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +L+  CA       G S+H  A++  +  D+++ N +++ YSK  ++  A  +F+ ++  
Sbjct: 8   SLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR 67

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           N LVSW+++ISG            LF +M  + +++ F++   ++ +C S  +L  G  +
Sbjct: 68  N-LVSWSAIISGYDQTGQPLLALNLFSQMRIVPNEYVFAS---VISACASLTALSQGLQV 123

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   LKLG  + +   NAL+ MY+ CG    A  L+  +    +   +N +I    +N  
Sbjct: 124 HAQSLKLGCVSVSFVSNALISMYMKCGLCTDAL-LVHNVMSEPNAVSYNALIAGFVENQQ 182

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            ++ I+ FK M +Q+  +PD  T   ++  C + +  + G  LH   +K  +     + N
Sbjct: 183 PEKGIEAFKVM-RQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGN 241

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FE 566
            +ITMY +   I+ A  VF      +L +WN +++A    K   RAL +FR +      +
Sbjct: 242 VIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVK 301

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           P++ +   +L+AC  L  +RHGKQIHGH+      ++  +S+AL++MY+ C         
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDV 361

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 ++  +W+++I+A+G HG G  A+E F +M   GI P   + + LL+AC+H+GLV
Sbjct: 362 FRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLV 421

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           +EG  Y+N+M E Y + P  EH  C++D+LGR+G+LQEA E+++ LP    P + G++LS
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AC  HGD  +G+ +A  L KL+P     Y+ LSN+Y +   W    E  K
Sbjct: 482 ACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWK 531



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 241/531 (45%), Gaps = 58/531 (10%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            ++     G  +H  ++K GM++D  + N  +N+Y+KCG++  +   F  M   + VSW+
Sbjct: 14  AKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWS 73

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            I+SG      P   L  F +M       +    +S ++A A L  LS G  +HA  +KL
Sbjct: 74  AIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVHAQSLKL 130

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G     +VS  N+LISMY +CG    A      M+  + VS+NA+I GF  N + E+  +
Sbjct: 131 GCVSVSFVS--NALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIE 188

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
               M+  +   PD  T   L+ +C        G  +H   I+  L     + N ++  Y
Sbjct: 189 AFKVMR-QKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMY 247

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC----SQFS 367
           SK N + +AE +F  I    DL+SWN++++             +F++ML +C      F+
Sbjct: 248 SKFNLIEEAEKVFGLIKE-KDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFT 306

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           F+ +LA   +C    S+  GK IH   ++     +    NAL++MY  CG +  ++ + +
Sbjct: 307 FAGVLA---ACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFR 363

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           R S  +  S WN +I A   +G    A++ F+ M +     PDSVT V +++AC +  L 
Sbjct: 364 RTSDRNLVS-WNTIIAAFGNHGLGARALEHFEKM-KTVGIHPDSVTFVGLLTACNHAGLV 421

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
            EG+                  N++   YG          +F      N+  ++C+I   
Sbjct: 422 EEGQVYF---------------NSMEEAYG----------IFP-----NIEHFSCLIDLL 451

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +      A E    L F  + I + S+LSAC   G +  G+ +   +  L
Sbjct: 452 GRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLKL 502



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 214/461 (46%), Gaps = 19/461 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ +  S  ++  YS       +  +F E  ++++V+W+A+I+   +    ++ L+ F
Sbjct: 33  GMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQPLLALNLF 92

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    I  +      ++SA   +  L QG  VH  S+K G ++ S + N  ++MY KC
Sbjct: 93  SQM---RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKC 149

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +    + M   + VS+N +++G + N  PEK +  F+ M   G   D  + S  +
Sbjct: 150 GLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLL 209

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                  +   G  +H   IKL  EDS ++   N +I+MYS+   IE AE+ F  +  KD
Sbjct: 210 GICTSYDDFWRGMQLHCQMIKLNLEDSAFIG--NVIITMYSKFNLIEEAEKVFGLIKEKD 267

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWN ++         E A  +  +M  +  V+PD  T   +++ CA    +R G+ +H
Sbjct: 268 LISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIH 327

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           G+ IR     D+ + N+L++ Y+K  S+  +  +F   +  N LVSWN++I+        
Sbjct: 328 GHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRN-LVSWNTIIAAFGNHGLG 386

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNA 408
                 F++M  +       T + +L +CN    +E G+   +  +   G   N    + 
Sbjct: 387 ARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSC 446

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           L+ +    G L  A   ++++    D      ++ AC  +G
Sbjct: 447 LIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHG 487



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 18/128 (14%)

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +I S+L  C ++    HG  +H      G   +  +S+ ++++YS C             
Sbjct: 5   AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             ++  +WS++IS Y   G+   A+ LF +M    I P +    S++SAC+    + +GL
Sbjct: 65  SDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGL 121

Query: 676 QYYNNMLE 683
           Q +   L+
Sbjct: 122 QVHAQSLK 129


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 201/726 (27%), Positives = 345/726 (47%), Gaps = 38/726 (5%)

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           I + +  + N  + G  +HC  IK G++ +  LCN  +++Y K   + ++   F  M   
Sbjct: 28  IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
              +W  ++S    +      L  F EM  SG   +  + SS V + A L ++SYG  +H
Sbjct: 88  TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              IK G+E +  V   +SL  +YS+CG  + A   F  +   D +SW  +I       K
Sbjct: 148 GSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMM 316
           + EA     EM +   V P+  T V L  L A S L L  G+++H   I R +  ++++ 
Sbjct: 206 WREALQFYSEM-VKAGVPPNEFTFVKL--LGASSFLGLEFGKTIHSNIIVRGIPLNVVLK 262

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS 364
            SL+DFYS+ + +  A  + N+ +   D+  W S++SG             F EM  L  
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           Q +  T  AIL  C++  SL+FGK IH   +K+GF ++T   NAL+ MY+ C       S
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
            +     + +   W  +I+    +G  Q+       M +++   P+ VTL  V+ AC  L
Sbjct: 382 RVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-VEPNVVTLSGVLRACSKL 440

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                   +H   L+  +  +  V N+L+  Y   R +  A  V  S    +  T+  ++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           + F++      AL +  ++       +++S+   +SA   LG L  GK +H +    GF 
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560

Query: 602 ENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEM 646
             + + ++L+DMYS C S                 +W+ ++S    +G    A+  F EM
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
                 P   + + LLSACS+  L D GL+Y+  M + Y++ P+ EH+V +V +LGR+G+
Sbjct: 621 RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGR 680

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L+EA   ++ + ++P   ++  +L AC + G+  +G+ +A     L P +   YI L+++
Sbjct: 681 LEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADL 740

Query: 767 YVALGR 772
           Y   G+
Sbjct: 741 YDESGK 746



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 180/737 (24%), Positives = 323/737 (43%), Gaps = 44/737 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L +L    +LL+ Y       ++  LF E  ++ V  W  MI+A  +++     L  F
Sbjct: 53  GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLF 112

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+  G   +  T   +V +   +  +  G  VH   IK G   +S + +   ++Y+KC
Sbjct: 113 EEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKC 172

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   FS +  ADT+SW  ++S  +      + L ++ EM  +G   +  +    +
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AS+ LG L +GK IH+  I  G   +  V +  SL+  YSQ   +E A R       +D
Sbjct: 233 GASSFLG-LEFGKTIHSNIIVRGIPLN--VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  W +++ GF  N + +EA     EM+ +  ++P+  T   ++SLC+    L  G+ +H
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGKQIH 348

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMI-------- 352
              I+        + N+L+D Y K S S  +A  +F A+   N +VSW ++I        
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN-VVSWTTLILGLVDHGF 407

Query: 353 ----SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                GL  EM+    + +  TL  +L +C+    +     IH + L+       +  N+
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  Y +   +  A+++++ +    D   +  ++    + G  + A+     M       
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR-DNITYTSLVTRFNELGKHEMALSVINYM-YGDGIR 525

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D ++L   ISA  NL     GK LH  ++KS       V N+L+ MY +C  ++ A  V
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585

Query: 529 FESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
           FE     ++ +WN ++S  + N    + + A E  R  E EP+ ++ + +LSAC+     
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS----- 640

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
                 +G +  LG +        +  +Y+       +  ++   G  G+  EA  +   
Sbjct: 641 ------NGRLTDLGLE----YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVET 690

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M    ++P      +LL AC + G +  G    N  L      P    ++ + D+   SG
Sbjct: 691 M---HLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL--YILLADLYDESG 745

Query: 706 KLQEAYEFIKNLPIQPK 722
           K + A +  +NL  + +
Sbjct: 746 KPELAQK-TRNLMTEKR 761



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 213/468 (45%), Gaps = 24/468 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   ++   TSL+  YS  S  E ++ +   +  +DV  W ++++  V N      +  
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM   G++ ++ T   I+S  + +  L  G+ +H  +IK G    + + N  V+MY K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372

Query: 121 C--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           C   ++ +S   F  M   + VSW T++ G + + + + C     EM     + + V+LS
Sbjct: 373 CSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             + A + L  +     IHA  ++  + D   V V NSL+  Y+    ++ A      M 
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRR-HVDGEMV-VGNSLVDAYASSRKVDYAWNVIRSMK 489

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D +++ +++  F   GK E A  +++ M     +  D  ++   IS  A+   L  G+
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGFISASANLGALETGK 548

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
            +H Y+++        ++NSL+D YSK  SL  A+ +F  IA   D+VSWN ++SGL   
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASN 607

Query: 356 ---------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                    F+EM    ++    T L +L +C++    + G  +  +Q+     N    V
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG--LEYFQVMKKIYNIEPQV 665

Query: 407 NALMHMY---INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              +H+       G L  A  +++ +    +   +  ++ AC   G+ 
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNL 713


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/557 (31%), Positives = 288/557 (51%), Gaps = 40/557 (7%)

Query: 255 NGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
           +G   EA  +L+ +   R S +P      +L+  C  ++    G   H +AI+  L  D 
Sbjct: 38  SGSLFEAIHVLNSIDWTRLSNKPFF--YASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDR 95

Query: 314 LMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
            + NSL+  Y K   +L +A  +F+ +    DL+SW SMI+G            LF EML
Sbjct: 96  FVGNSLLALYFKLGPNLFEARRVFDGLF-YKDLISWTSMITGYVKVEKPKKSLELFLEML 154

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN---CG 417
            L  + +  TL A++ +C+    L  GK  H   +  GF  N +   AL+ MY       
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D +  F  L +     D  CW  +I A T+N  + +A+  F SM ++   SPD  T   V
Sbjct: 215 DAILVFVELPQ----PDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTV 270

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ++ACGNL    +GK +H   + S +  +  V+++L+ MYG+CR +  +  VF+     NL
Sbjct: 271 LTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNL 330

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
            +W  ++  + QN      + +FR  + + +  S  ++L AC  L  +R GK++H     
Sbjct: 331 VSWTALLGGYCQNGDFESVIRIFREGK-KVDTYSFGTVLRACAGLAAVRQGKEVHCQYVK 389

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
                +    SAL+D+Y+ C               ++   W+SMI  +  +G+G E  +L
Sbjct: 390 RCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQL 449

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F EM   GIRP   S + +L ACSH+GLVD+G +Y+  M E Y+++P  EH+ C++D+LG
Sbjct: 450 FDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLG 509

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G L+EA   I+N   + +P +W  +L AC+    +   +++A+   +L+P++   Y+ 
Sbjct: 510 RAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVY 569

Query: 763 LSNMYVALGRWKDAVEI 779
           L+N+Y A+GRW DAV+I
Sbjct: 570 LANVYRAVGRWDDAVKI 586



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 242/502 (48%), Gaps = 27/502 (5%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSECTFSGMHCADTVSW 142
           T+      G   H  +IK+G+  D  + N  + +Y K G +L  +   F G+   D +SW
Sbjct: 71  TKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISW 130

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
            ++++G +    P+K L  F EM   G + +  +LS+ + A + LG+L  GK  H + + 
Sbjct: 131 TSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMV 190

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G++ +  +S   +LI MY +   ++ A   F  +   D + W +II  F  N  +++A 
Sbjct: 191 RGFDLNDVIS--TALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKAL 248

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
              + M     + PD  T  T+++ C +   L++G+ VH   I   L  ++ + +SL+D 
Sbjct: 249 GFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDM 308

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQ------FSFSTL 371
           Y K   +++++ +F+ ++  N LVSW +++ G      F+ ++ +  +      +SF T 
Sbjct: 309 YGKCRLVNQSQCVFDRMSVKN-LVSWTALLGGYCQNGDFESVIRIFREGKKVDTYSFGT- 366

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
             +L +C    ++  GK +HC  +K     + +  +AL+ +Y  CG +  A+ +  R+S 
Sbjct: 367 --VLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVRMSV 424

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
            +  + WN +I    QNG   E  + F  M  ++   PD ++ V V+ AC +  L  +GK
Sbjct: 425 RNLIT-WNSMIYGFAQNGRGGEVFQLFDEMI-EEGIRPDYISFVGVLFACSHAGLVDQGK 482

Query: 492 SLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCN--LCTWNCMISAF 547
                A+  +  +   ++  N +I + GR   ++ A  + E+  NC      W  ++ A 
Sbjct: 483 KYFA-AMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENA-NCRDEPSLWTVLLGAC 540

Query: 548 SQNKAEVRALELFRH-LEFEPN 568
           + +     A  + +  +E +P+
Sbjct: 541 AASPHSATAERIAKKAVELKPD 562



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 226/488 (46%), Gaps = 41/488 (8%)

Query: 28  ALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMN 87
            LFY    KD+++W +MIT  V+       L  F EM+  GI  +  TL  ++ A + + 
Sbjct: 121 GLFY----KDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLG 176

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L+ G+  H + +  G   +  +    ++MY +   ++ +   F  +   D + W +I+S
Sbjct: 177 DLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIIS 236

Query: 148 GCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
               N+  +K L +F  M    G   D  +  + + A   LG L  GK +HA  I  G  
Sbjct: 237 AFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGL- 295

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            S  V V +SL+ MY +C  +  ++  F  M+ K++VSW A++ G+  NG FE    +  
Sbjct: 296 -SGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR 354

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           E +     + D  +  T++  CA    +R+G+ VH   ++R    D++  ++L+D Y+K 
Sbjct: 355 EGK-----KVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKC 409

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A  +F  ++  N L++WNSMI G            LF EM+    +  + + + +
Sbjct: 410 GCIDFAYRIFVRMSVRN-LITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGV 468

Query: 375 LPSCNSPESLEFGKS-----IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           L +C+    ++ GK         +++K G  +     N ++ +    G L  A +L++  
Sbjct: 469 LFACSHAGLVDQGKKYFAAMTEVYEIKPGIEH----YNCMIDLLGRAGLLEEAENLIENA 524

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VTLVNVISACGNLE 485
           +   + S W +++ AC  + H   A +  K   + +   PD     V L NV  A G  +
Sbjct: 525 NCRDEPSLWTVLLGACAASPHSATAERIAKKAVELK---PDHHLSYVYLANVYRAVGRWD 581

Query: 486 LAFEGKSL 493
            A + ++L
Sbjct: 582 DAVKIRNL 589



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 170/342 (49%), Gaps = 19/342 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  +   ST+L+  Y   S  + ++ +F E    D + W ++I+A   N      L F
Sbjct: 191 RGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYDKALGF 250

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M  + G+  D  T   +++A   +  LKQG+ VH   I +G+  +  + +  V+MY 
Sbjct: 251 FYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYG 310

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC  +N S+C F  M   + VSW  ++ G   N   E  +  FRE    G++ D  S  +
Sbjct: 311 KCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKKVDTYSFGT 366

Query: 180 AVAASACLGELSYGKVIHALGIKL-GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            + A A L  +  GK +H   +K   + D   V   ++L+ +Y++CG I+ A R F  M+
Sbjct: 367 VLRACAGLAAVRQGKEVHCQYVKRCCWRD---VVTESALVDLYAKCGCIDFAYRIFVRMS 423

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +++++WN++I GFA NG+  E F L  EM +   + PD  + V ++  C+ + L+ +G+
Sbjct: 424 VRNLITWNSMIYGFAQNGRGGEVFQLFDEM-IEEGIRPDYISFVGVLFACSHAGLVDQGK 482

Query: 299 SVHG-----YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
                    Y I+  + +     N ++D   ++  L +AE L
Sbjct: 483 KYFAAMTEVYEIKPGIEH----YNCMIDLLGRAGLLEEAENL 520


>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/530 (33%), Positives = 274/530 (51%), Gaps = 47/530 (8%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L+  R  H   +   L  +  +   L+  Y+       + L+F+++   N  + WNS+I+
Sbjct: 39  LKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFL-WNSLIN 97

Query: 354 GLFKEMLY---------LCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           G  K  LY         +CS       F+ STL  +     +   L  GKSIH   ++ G
Sbjct: 98  GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGA---LFSGKSIHGKSIRTG 154

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV--ACTQNGHFQEAIK 456
           F ++T+  N++M MY  CG+   +  +   ++  +  S WN++I   A + N +F+E   
Sbjct: 155 FVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGS-WNVLIAGYAVSGNCNFREETW 213

Query: 457 TFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKS--LMGLDTRVQNA-- 511
            F    Q     PD+ T+ +++  C G++     G+ LH   +K+  ++GLD+ V     
Sbjct: 214 EFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCC 273

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF----EP 567
           LI MY R   +     VF+     N+ +W  MI+ + +N     AL LFR ++     EP
Sbjct: 274 LIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEP 333

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           N +S+VS+L AC+    L  G+QIHG            + +AL+DMYS C          
Sbjct: 334 NRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF 393

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 K   +WSSMIS YG HGKG EAI L+ +M  +GIRP   + + +LSAC  SGLV
Sbjct: 394 EDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLV 453

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           +EGL  Y++++ +Y + P  E   CIVDMLGR+G+L  A +FIK +P++P P VWGA++S
Sbjct: 454 NEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVS 513

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
               HGD +M +     L +LEP+N   Y+S+SN+Y +  RW    E+ +
Sbjct: 514 CSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRR 563



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 232/481 (48%), Gaps = 23/481 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+ AY+   +   S  +F    +K+V  WN++I  CV+NR        F +M    +
Sbjct: 61  ATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDV 120

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  TL  +    +++  L  G+ +H  SI+ G ++D+ + N  ++MY KCG+ + S  
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRK 180

Query: 130 TFSGMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLSSAVA-ASA 185
            F  M   ++ SWN +++G   +   N+ E+   + ++M     + D  ++SS +     
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDG 240

Query: 186 CLGELSYGKVIHALGIK----LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            +G+  YG+ +H   +K    LG +   ++     LI MYS+   +    R F  M C++
Sbjct: 241 DMGKWDYGRELHCYIVKNELVLGLDSDVHLGCC--LIDMYSRSNKVVVGRRVFDRMKCRN 298

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V SW A+I+G+  NG  +EA  L  +MQ++  VEP+  ++V+++  C+    L  GR +H
Sbjct: 299 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIH 358

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
           G+A+R+ L  ++ + N+L+D YSK  SL  A  +F   +   D +SW+SMISG       
Sbjct: 359 GFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKG 418

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA- 408
                L+ +ML    +    T + IL +C     +  G +I+   +       T+ + A 
Sbjct: 419 QEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICAC 478

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ M    G L  A   ++ I      S W  ++     +G  +     ++ + Q +  +
Sbjct: 479 IVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKN 538

Query: 469 P 469
           P
Sbjct: 539 P 539



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 226/460 (49%), Gaps = 29/460 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK  R  H   +  G+  +S L    +  YA C     S   F  +   +   WN++++G
Sbjct: 39  LKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLING 98

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           C+ N    +    F +M  S    D+ +LS+    S+ LG L  GK IH   I+ G+   
Sbjct: 99  CVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSD 158

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK---FEEAFDLL 265
             V+  NS++SMY +CG+ + + + F  MT ++  SWN +I G+A++G     EE ++ +
Sbjct: 159 TVVA--NSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV 216

Query: 266 HEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSVHGYAIRR--LLGY--DLLMMNSLM 320
            +MQ M  V PD  T+ +L+ LC  D      GR +H Y ++   +LG   D+ +   L+
Sbjct: 217 KQMQ-MDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLI 275

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFS 367
           D YS+SN +     +F+ +   N + SW +MI+G            LF++M  +   + +
Sbjct: 276 DMYSRSNKVVVGRRVFDRMKCRN-VFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPN 334

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             +L+++LP+C+S   L  G+ IH + ++   +N     NAL+ MY  CG L +A  + +
Sbjct: 335 RVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFE 394

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             S   D   W+ +I     +G  QEAI  +  M  Q    PD +T V ++SACG   L 
Sbjct: 395 DDSLCKDAISWSSMISGYGLHGKGQEAILLYDKML-QAGIRPDMITTVGILSACGRSGLV 453

Query: 488 FEGKSLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSA 525
            EG +++   +    G++  ++    ++ M GR   +  A
Sbjct: 454 NEGLNIYSSVIND-YGIEPTLEICACIVDMLGRAGQLDRA 492



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 176/363 (48%), Gaps = 14/363 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVM--GL 58
           GF++    + S+++ Y     F+ S  +F E   ++  +WN +I    V   C       
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETW 213

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALT-QMNCLKQGRVVHCLSIK----AGMIADSSLCNV 113
            F  +M  + +R D+ T+  ++      M     GR +HC  +K     G+ +D  L   
Sbjct: 214 EFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCC 273

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSGEQA 172
            ++MY++   +      F  M C +  SW  +++G + N   ++ L  FR+M    G + 
Sbjct: 274 LIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEP 333

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           + VSL S + A +    L  G+ IH   ++   E +  VS+ N+LI MYS+CG +++A R
Sbjct: 334 NRVSLVSVLPACSSFSGLLSGRQIHGFAVR--KELNNEVSLCNALIDMYSKCGSLDSARR 391

Query: 233 AFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            F   + CKD +SW+++I G+ L+GK +EA  LL++  L   + PD+ T V ++S C  S
Sbjct: 392 VFEDDSLCKDAISWSSMISGYGLHGKGQEAI-LLYDKMLQAGIRPDMITTVGILSACGRS 450

Query: 292 LLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
            L+ EG +++   I    +   L +   ++D   ++  L +A     AI        W +
Sbjct: 451 GLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGA 510

Query: 351 MIS 353
           ++S
Sbjct: 511 LVS 513


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/566 (29%), Positives = 301/566 (53%), Gaps = 52/566 (9%)

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           +EA  +L E Q ++S     A  V L+  C ++  L   +++HG+ ++     D+ +  S
Sbjct: 64  QEAMAMLKEGQSVQS-----AMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATS 118

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++ Y +  +   A  LF+ + P  ++V+W ++I+G            +F EML L    
Sbjct: 119 LVNVYMRCGNSQDARNLFDEM-PEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYP 177

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  TL  +L +C +  +++ GK +H + +K G ++ T   N+L  +Y   G+L +     
Sbjct: 178 SDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAF 237

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQE-AIKTFKSMTQQQNASPDSVTLVNVISACG-NL 484
           +RI  + +   W  +I AC ++ ++ E  +  F  M + +   P+  TL +V+S CG +L
Sbjct: 238 KRIP-DKNVITWTTMISACAEDENYTELGLNLFLDMLKGE-VMPNEFTLTSVMSLCGTSL 295

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           ++   GK + G   K     +  V+N+ + +Y R  + + A  +FE   + ++ TWN MI
Sbjct: 296 DMNL-GKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMI 354

Query: 545 SAFSQ-----------NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
           S F+Q                +AL++FR L     +P+  +  SILS C+ +  L  G+Q
Sbjct: 355 SGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQ 414

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH      GF  +  ++SAL++MY+ C               ++   W+SMIS Y  HG+
Sbjct: 415 IHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGR 474

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             +AI+LF +M  +G +P + + +SLLSACS++GLV+E ++Y++ M  EY + P  +H+ 
Sbjct: 475 PHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYG 534

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++DM  R G+L +AY FIK    +P   +W ++++ C  HG+ ++    A+ L +L+P+
Sbjct: 535 CMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPK 594

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
            V  Y+ L NMY++ GRW+D   + K
Sbjct: 595 VVETYVLLLNMYISTGRWRDVARVRK 620



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 241/549 (43%), Gaps = 70/549 (12%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M++EG    S   + ++    +   L   + +H   +K G I D  +    VN+Y +CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F  M   + V+W  +++G   N+ P   L  F EM   G    + +L   ++A
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
                 +  GK +H   IK G   +   S+ NSL  +Y++ G++E+  RAF  +  K+V+
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGA--ASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVI 246

Query: 244 SWNAIIDGFALNGKFEE-AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +W  +I   A +  + E   +L  +M L   V P+  T+ +++SLC  SL +  G+ V G
Sbjct: 247 TWTTMISACAEDENYTELGLNLFLDM-LKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQG 305

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           +  +     +L + NS M  Y +     +A  LF  +   N +++WN+MISG        
Sbjct: 306 FCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMED-NSVITWNAMISGFAQIMDSA 364

Query: 355 ---------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
                          +F++++    +    T  +IL  C++  +LE G+ IH   +K GF
Sbjct: 365 KDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGF 424

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            ++ +  +AL++MY  CG +  A      +   +  + W  +I   +Q+G   +AI+ F+
Sbjct: 425 LSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVT-WTSMISGYSQHGRPHDAIQLFE 483

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALIT 514
            M     A P+ +T V+++SAC          S  GL  +++   D  +QN      L+ 
Sbjct: 484 DMI-LAGAKPNEITFVSLLSAC----------SYAGLVEEAMRYFDM-MQNEYHIEPLMD 531

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
            YG                        CMI  F +      A    +   FEPNE    S
Sbjct: 532 HYG------------------------CMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSS 567

Query: 575 ILSACTQLG 583
           +++ C   G
Sbjct: 568 LVAGCRSHG 576



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 231/485 (47%), Gaps = 43/485 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +  +TSL+  Y      + +  LF E   K+VVTW A+IT    N   V+ L  F
Sbjct: 108 GTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVF 167

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM++ G      TL  ++SA    + +  G+ VH  +IK G  + +S+ N    +Y K 
Sbjct: 168 VEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKS 227

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G+L S    F  +   + ++W T++S C  + NY E  L  F +M       +  +L+S 
Sbjct: 228 GNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSV 287

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++      +++ GK +     K+G   +  + V NS + +Y + G+ E A R F  M   
Sbjct: 288 MSLCGTSLDMNLGKQVQGFCFKIGCATN--LPVKNSTMYLYLRKGETEEAMRLFEEMEDN 345

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHE-----------MQLMRS-VEPDIATVVTLISLC 288
            V++WNA+I GFA     + A D LH              L+RS ++PD+ T  +++S+C
Sbjct: 346 SVITWNAMISGFA--QIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVC 403

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +  + L +G  +H   I+     D+++ ++L++ Y+K   +  A   F  + P   LV+W
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEM-PTRTLVTW 462

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
            SMISG            LF++M+   ++ +  T +++L +C+    +E  +++  + + 
Sbjct: 463 TSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVE--EAMRYFDMM 520

Query: 397 LGFSNNTIGVNALM-------HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
                N   +  LM        M++  G L  A++ ++R     + + W+ ++  C  +G
Sbjct: 521 ----QNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576

Query: 450 HFQEA 454
           + + A
Sbjct: 577 NMELA 581


>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
 gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
          Length = 643

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 181/596 (30%), Positives = 304/596 (51%), Gaps = 44/596 (7%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N L+  Y +CG +  A   F  +  +++ SW  ++  +A NG   EA  L  E+Q  R +
Sbjct: 51  NLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQ-SRGM 109

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKA 332
             D  T+V+ +  CA +  L EGR +H  A  R LGY+  +++  +L+  Y K   L +A
Sbjct: 110 AIDNVTLVSALKACAVAGDLEEGRGIHASA--RSLGYESEIIVATALVSMYGKCGHLEEA 167

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
           + +F  +   N  VSWN+M++             L++ M +   +   +T +++L     
Sbjct: 168 KAVFATLVERNR-VSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKG 226

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
               E G  IH   L+ GF +NT   NAL+ MY + G +  A  +   I+  +  S WN 
Sbjct: 227 EG--EHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVS-WNA 283

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNA--SPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           ++ A  QNG + +A+  F  M + + A   P+SVT VN++ AC        G+ +H   +
Sbjct: 284 MLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHA-EV 342

Query: 499 KSLMGLDT-RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            SL  L T  V  ALI MY  C ++  A +VF+S  + NL +WN +I +++ +     AL
Sbjct: 343 ASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEAL 402

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            + + +E E   P++ + +S+L AC+    L  GK IH  +   G + +  I +AL+++Y
Sbjct: 403 GVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLY 462

Query: 615 SNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
             C                ++   W+SM++A    G   + +E+ H M   GI P + + 
Sbjct: 463 GKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTF 522

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           +S+L ACSH G + +GL  + +   +Y +   T+H+VC+VD+LGR G+L+EA E +  +P
Sbjct: 523 LSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMP 582

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
            Q     W  +L AC  H D + G++ A+ + +L+P+N   Y  LS M+   GR +
Sbjct: 583 FQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLSTMFSVAGRGR 638



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 245/507 (48%), Gaps = 27/507 (5%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           + G   D  L N+ V  Y KCG +  +   F  +   +  SW  ++     N +  + L 
Sbjct: 40  RDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALG 99

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            FRE+   G   DNV+L SA+ A A  G+L  G+ IHA    LGYE    + V  +L+SM
Sbjct: 100 LFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESE--IIVATALVSM 157

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y +CG +E A+  F  +  ++ VSWNA++  +A NG  EEA   L+ +     ++PD  T
Sbjct: 158 YGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVR-LYRLMCFEGIKPDATT 216

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
            V+++           G  +H   +    G +  + N+L+  Y     +  A  +F+ IA
Sbjct: 217 FVSVLDGWKGE--GEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIA 274

Query: 341 PMNDLVSWNSMISG------------LF---KEMLYLCSQFSFSTLLAILPSCNSPESLE 385
               +VSWN+M++             LF    EM     + +  T + +L +C +   LE
Sbjct: 275 E-KTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLE 333

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+ IH     LG  +      AL++MY  CG+LV A S+   + H +  S WN++I + 
Sbjct: 334 AGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVS-WNVLIGSY 392

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
             +G  +EA+   + M + +   PD  T ++V+ AC   E   EGK++H L   S +  D
Sbjct: 393 AGDGDGKEALGVHQKM-ELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERD 451

Query: 506 TRVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE 564
             +  ALI +YG+C  ++ A  VF +     NL TWN M++A          +E+   + 
Sbjct: 452 EAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMG 511

Query: 565 FE---PNEISIVSILSACTQLGVLRHG 588
            E   P+E++ +S+L AC+  G ++ G
Sbjct: 512 LEGIMPDELTFLSVLFACSHGGSIQQG 538



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 272/603 (45%), Gaps = 50/603 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+ AY        +  +F     +++ +W  M+ A  +N      L  F E+   G+  D
Sbjct: 53  LVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAID 112

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TL+  + A      L++GR +H  +   G  ++  +    V+MY KCG L  ++  F+
Sbjct: 113 NVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFA 172

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + VSWN +++    N + E+ +  +R M + G + D  +  S +      GE  +
Sbjct: 173 TLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVL--DGWKGEGEH 230

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  IH   ++ G+      ++ N+L+SMY   G ++ A   F G+  K VVSWNA++  +
Sbjct: 231 GTRIHDQVLESGF--GSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAY 288

Query: 253 ALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           A NG++ +A DL  +M  MR   VEP+  T V L+  CA +  L  GR +H       L 
Sbjct: 289 AQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLL 348

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQ 365
             L +  +L++ YS+  +L  A+ +F+++ P  +LVSWN +I      G  KE L +  +
Sbjct: 349 STLSVGGALINMYSECGNLVLAKSVFDSV-PHKNLVSWNVLIGSYAGDGDGKEALGVHQK 407

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
                      T +++L +C++ E+L  GK+IH      G   +     AL+++Y  CG 
Sbjct: 408 MELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGS 467

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A ++   +    +   WN ++ A    G  ++ ++    M   +   PD +T ++V+
Sbjct: 468 LEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIH-MMGLEGIMPDELTFLSVL 526

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC     +  G    GL L    G+D          YG   + K               
Sbjct: 527 FAC-----SHGGSIQQGLDLFLSAGVD----------YGIATNTKH-------------- 557

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            + C++    +      A E+   + F+ N+++ +++L AC        G++   +V  L
Sbjct: 558 -YVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIEL 616

Query: 599 GFQ 601
             Q
Sbjct: 617 DPQ 619



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 234/495 (47%), Gaps = 42/495 (8%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I++  +++  CA +  L   +       R   G D  + N L+  Y K  S+  A  +F+
Sbjct: 12  ISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFD 71

Query: 338 AIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            I   N + SW  M+             GLF+E+          TL++ L +C     LE
Sbjct: 72  RIQRRN-IFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLE 130

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+ IH     LG+ +  I   AL+ MY  CG L  A ++   +   +  S WN ++ A 
Sbjct: 131 EGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVS-WNAMLAAY 189

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA-CGNLELAFEGKSLHGLALKSLMGL 504
            QNGH +EA++ ++ M   +   PD+ T V+V+    G  E    G  +H   L+S  G 
Sbjct: 190 AQNGHCEEAVRLYRLMC-FEGIKPDATTFVSVLDGWKGEGE---HGTRIHDQVLESGFGS 245

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---- 560
           +T + NAL++MYG    +  A  VF+      + +WN M++A++QN    +A++LF    
Sbjct: 246 NTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMD 305

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
             R    EPN ++ V++L AC   G L  G++IH  V  LG      +  AL++MYS C 
Sbjct: 306 EMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECG 365

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K+  +W+ +I +Y   G G EA+ +  +M   G++P K + IS+L 
Sbjct: 366 NLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLH 425

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           ACS S  + EG +  + ++    +  +      ++++ G+ G L++A     ++  +   
Sbjct: 426 ACSASEALAEG-KAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNL 484

Query: 724 GVWGAML-SACSHHG 737
             W +ML +AC+  G
Sbjct: 485 VTWNSMLAAACTKGG 499



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 250/507 (49%), Gaps = 24/507 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + +  +T+L++ Y    + E + A+F     ++ V+WNAM+ A  +N      +  +
Sbjct: 143 GYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLY 202

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EGI+ D+TT + ++         + G  +H   +++G  ++++L N  V+MY   
Sbjct: 203 RLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESGFGSNTTLANALVSMYGSG 260

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFR--EMGWSGEQADNVSLS 178
           G ++ +   F G+     VSWN +++    N  Y +   L+++  EM  +  + ++V+  
Sbjct: 261 GRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFV 320

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           + + A A  G L  G+ IHA    LG   +  +SV  +LI+MYS+CG++  A+  F  + 
Sbjct: 321 NLLVACAATGFLEAGRKIHAEVASLGLLST--LSVGGALINMYSECGNLVLAKSVFDSVP 378

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K++VSWN +I  +A +G  +EA  +  +M+L   ++PD  T ++++  C+ S  L EG+
Sbjct: 379 HKNLVSWNVLIGSYAGDGDGKEALGVHQKMEL-EGLKPDKFTFISVLHACSASEALAEGK 437

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
           ++H       L  D  +  +L++ Y K  SL +A  +F  +    +LV+WNSM++     
Sbjct: 438 AIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTK 497

Query: 354 GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNTIG 405
           G  ++ + +              T L++L +C+   S++ G  +     +  G + NT  
Sbjct: 498 GGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKH 557

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-- 463
              ++ +    G L  A  +L R+   ++   W  ++ AC  +  F++  +    + +  
Sbjct: 558 YVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELD 617

Query: 464 QQNASPDSVTLVNVISACGNLELAFEG 490
            QNA+P ++ L  + S  G   +  +G
Sbjct: 618 PQNAAPYAL-LSTMFSVAGRGRMPAKG 643



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 173/341 (50%), Gaps = 33/341 (9%)

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCGDLVA 421
            +  + S+  +IL  C S   L   K    W++ + GF  +    N L+  Y  CG +  
Sbjct: 7   ATAIAISSHASILRDCASARDLTAAKQAQ-WEIARDGFGGDRYLGNLLVQAYGKCGSVRD 65

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  RI   +  S W I++ A   NGH +EA+  F+ + Q +  + D+VTLV+ + AC
Sbjct: 66  AREVFDRIQRRNIFS-WTIMLGAYADNGHGREALGLFREI-QSRGMAIDNVTLVSALKAC 123

Query: 482 ---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
              G+LE   EG+ +H  A       +  V  AL++MYG+C  ++ A  VF +    N  
Sbjct: 124 AVAGDLE---EGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRV 180

Query: 539 TWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN M++A++QN     A+ L+R + FE   P+  + VS+L      G   HG +IH  V
Sbjct: 181 SWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQV 238

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              GF  N+ +++AL+ MY +                K+  +W++M++AY  +G+  +A+
Sbjct: 239 LESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAV 298

Query: 641 ELF---HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
           +LF    EM  + + P   + ++LL AC+ +G ++ G + +
Sbjct: 299 DLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIH 339


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 182/675 (26%), Positives = 328/675 (48%), Gaps = 40/675 (5%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D  S+ +++ G   +   ++    F  +   G + D    SS +  SA L +  +G+ +H
Sbjct: 57  DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              IK G+ D   VSV  SL+  Y +  + +   + F  M  ++VV+W  +I G+A N  
Sbjct: 117 CQCIKFGFLDD--VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            +E   L   MQ     +P+  T    + + A+  +   G  VH   ++  L   + + N
Sbjct: 175 NDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           SL++ Y K  ++ KA +LF+    +  +V+WNSMISG            +F  M     +
Sbjct: 234 SLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            S S+  +++  C + + L F + +HC  +K GF  +     ALM  Y  C  ++ A  L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            + I    +   W  +I    QN   +EA+  F  M +++   P+  T   +++A   + 
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTALPVIS 411

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            +     +H   +K+     + V  AL+  Y +   ++ A+ VF    + ++  W+ M++
Sbjct: 412 PS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV-LRHGKQIHGHVFHLGFQ 601
            ++Q      A+++F  L     +PNE +  SIL+ C      +  GKQ HG        
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            +  +SSALL MY+                 K   +W+SMIS Y  HG+  +A+++F EM
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
               ++    + I + +AC+H+GLV+EG +Y++ M+ +  + P  EH+ C+VD+  R+G+
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L++A + I+N+P      +W  +L+AC  H  T++G+  AE +  ++PE+   Y+ LSNM
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707

Query: 767 YVALGRWKDAVEIGK 781
           Y   G W++  ++ K
Sbjct: 708 YAESGDWQERAKVRK 722



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 174/662 (26%), Positives = 314/662 (47%), Gaps = 68/662 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR +HC  IK G + D S+    V+ Y K  +       F  M   + V+W T++SG   
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N+  ++ L  F  M   G Q ++ + ++A+   A  G    G  +H + +K G + +  +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--I 229

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL- 270
            V+NSLI++Y +CG++  A   F     K VV+WN++I G+A NG   EA  + + M+L 
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289

Query: 271 -MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
            +R  E   A+V   I LCA+   LR    +H   ++    +D  +  +LM  YSK  ++
Sbjct: 290 YVRLSESSFASV---IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY---LCSQFSFSTLLAI 374
             A  LF  I  + ++VSW +MISG            LF EM       ++F++S +L  
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           LP  +  E       +H   +K  +  ++    AL+  Y+  G +  A  +   I  + D
Sbjct: 407 LPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKD 458

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF-EGKSL 493
              W+ ++    Q G  + AIK F  +T +    P+  T  ++++ C     +  +GK  
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAATNASMGQGKQF 517

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG A+KS +     V +AL+TMY +  +I+SA  VF+     +L +WN MIS ++Q+   
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
           ++AL++F+ +   + + + ++ + + +ACT  G++  G++     F +            
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK----YFDI------------ 621

Query: 611 LDMYSNCK---SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV-ISLLSACS 666
             M  +CK   +    S M+  Y   G+  +A+++   M N    P  S++  ++L+AC 
Sbjct: 622 --MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN----PAGSTIWRTILAACR 675

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQE---AYEFIKNLPIQPK 722
                + G      ++    ++PE +  +V + +M   SG  QE     + +    ++ +
Sbjct: 676 VHKKTELGRLAAEKIIA---MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE 732

Query: 723 PG 724
           PG
Sbjct: 733 PG 734



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 274/595 (46%), Gaps = 31/595 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +   TSL+  Y   S F+    +F E   ++VVTW  +I+    N      L  F
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG + +S T    +  L +     +G  VH + +K G+     + N  +N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +   F        V+WN+++SG   N    + L  F  M  +  +    S +S +
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
              A L EL + + +H   +K G+      ++  +L+  YS+C  +  A R F  + C  
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQ--NIRTALMVAYSKCTAMLDALRLFKEIGCVG 360

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW A+I GF  N   EEA DL  EM+  + V P+  T   +++    +L +     V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMK-RKGVRPNEFTYSVILT----ALPVISPSEV 415

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++        +  +L+D Y K   + +A  +F+ I    D+V+W++M++G      
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGE 474

Query: 355 ------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                 +F E+       ++F+FS++L +  + N+  S+  GK  H + +K    ++   
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA--SMGQGKQFHGFAIKSRLDSSLCV 532

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL+ MY   G++ +A  + +R     D   WN +I    Q+G   +A+  FK M +++
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKR 590

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKS 524
               D VT + V +AC +  L  EG+    + ++      T+  N+ ++ +Y R   ++ 
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650

Query: 525 ASTVFESCYNCNLCT-WNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           A  V E+  N    T W  +++A     K E+  L   + +  +P + +   +LS
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 194/628 (30%), Positives = 316/628 (50%), Gaps = 47/628 (7%)

Query: 193 GKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
           G ++H    KL   D    SVT NSLIS+YS+CG  E A   F  M + +D++SW+A++ 
Sbjct: 85  GTLVHE---KLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVS 141

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LL 309
            FA N     A     +M +     P+          C+ +  +  G S+ G+ I+   L
Sbjct: 142 CFANNNMGFRALLTFVDM-IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYL 200

Query: 310 GYDLLMMNSLMDFYSKSN-SLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
             D+ +   L+D + K    L  A  +F  + P  + V+W  MI+             LF
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKM-PERNAVTWTLMITRLMQFGYAGEAIDLF 259

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +M++   +    TL  ++ +C + E L  G+ +H   ++ G + +      L++MY  C
Sbjct: 260 LDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319

Query: 417 ---GDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHF-QEAIKTFKSMTQQQNASPDS 471
              G + AA  +  +I  HN     W  +I    Q G + +EA+  F+ M    +  P+ 
Sbjct: 320 SVDGSMCAARKIFDQILDHN--VFSWTAMITGYVQKGGYDEEALDLFRGMILT-HVIPNH 376

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T  + + AC NL     G+ +   A+K        V N+LI+MY R   I  A   F+ 
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
            +  NL ++N +I A+++N     ALELF  +E +    +  +  S+LS    +G +  G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           +QIH  V   G + N  + +AL+ MYS C               ++  +W+S+I+ +  H
Sbjct: 497 EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   +A+ELFH+M   G+RP + + I++LSACSH GLV+EG +++ +M  E+ V P  EH
Sbjct: 557 GFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH 616

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + CIVD+LGRSG L EA +FI ++P +    VW   L AC  HG+ ++GK  A+++ + E
Sbjct: 617 YACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P +   YI LSN+Y ++ +W +   I K
Sbjct: 677 PHDPAAYILLSNLYASISKWDEVSNIRK 704



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 283/601 (47%), Gaps = 48/601 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALFY-ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           T  SL++ YS    +E + ++F     ++D+++W+AM++    N      L  F +M+E 
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKC-GDLN 125
           G   +         A +    +  G  +    IK G + +D  +    ++M+ K  GDL 
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLV 222

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           S+   F  M   + V+W  +++  +   Y  + +  F +M +SG + D  +LS  ++A A
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC---GDIEAAERAFWGMTCKDV 242
            +  L  G+ +H+  I+ G      V     LI+MY++C   G + AA + F  +   +V
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCC--LINMYAKCSVDGSMCAARKIFDQILDHNV 340

Query: 243 VSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            SW A+I G+   G + EEA DL   M ++  V P+  T  + +  CA+   LR G  V 
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGM-ILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399

Query: 302 GYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
            +A++  LG+  +  + NSL+  Y++S  +  A   F+ +   N L+S+N++I    K  
Sbjct: 400 THAVK--LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN-LISYNTVIDAYAKNL 456

Query: 358 ---EMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
              E L L           S F+F++LL+      S  ++  G+ IH   +K G   N  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLS---GAASIGTIGKGEQIHARVIKSGLKLNQS 513

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL+ MY  CG++ +AF + + +   +  S W  +I    ++G   +A++ F  M  +
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTSIITGFAKHGFATQALELFHKML-E 571

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           +   P+ VT + V+SAC ++ L  EG   H  ++ +  G+  R+++   ++ + GR   +
Sbjct: 572 EGVRPNEVTYIAVLSACSHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACIVDILGRSGSL 630

Query: 523 KSASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRH-----LEFEPNEISIVSIL 576
             A     S  Y  +   W   + A   +      LEL +H     +E EP++ +   +L
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHG----NLELGKHAAKMIIEQEPHDPAAYILL 686

Query: 577 S 577
           S
Sbjct: 687 S 687



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 225/480 (46%), Gaps = 35/480 (7%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S+  +F +   ++ VTW  MIT  ++       +  F +M+  G   D  TL  ++SA  
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADTVS 141
            M  L  G+ +H  +I+ G+  D  +    +NMYAKC   G + ++   F  +   +  S
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342

Query: 142 WNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           W  +++G +    Y E+ L  FR M  +    ++ + SS + A A L  L  G+ +    
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA 402

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +KLG+  S    V NSLISMY++ G I+ A +AF  +  K+++S+N +ID +A N   EE
Sbjct: 403 VKLGF--SSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A +L +E++  + +     T  +L+S  A    + +G  +H   I+  L  +  + N+L+
Sbjct: 461 ALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             YS+  ++  A  +F  +   N ++SW S+I+G            LF +ML    + + 
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNALMHMYI-------NCGDLV 420
            T +A+L +C+    +  G     W+  K  ++ +  GV   M  Y          G L 
Sbjct: 579 VTYIAVLSACSHVGLVNEG-----WKHFKSMYTEH--GVIPRMEHYACIVDILGRSGSLS 631

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A   +  + + +D   W   + AC  +G+ +      K + +Q+   P +  L++ + A
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 134/284 (47%), Gaps = 8/284 (2%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + SL++ Y+     + +   F     K+++++N +I A  +N      L  F E+ ++G
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +   + T   ++S    +  + +G  +H   IK+G+  + S+CN  ++MY++CG++ S+ 
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + +SW +I++G   + +  + L  F +M   G + + V+  + ++A + +G
Sbjct: 533 QVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVG 592

Query: 189 ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWN 246
            ++ G K   ++  + G    P +     ++ +  + G +  A +    M  K D + W 
Sbjct: 593 LVNEGWKHFKSMYTEHGV--IPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWR 650

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCA 289
             +    ++G  E      H  +++   EP D A  + L +L A
Sbjct: 651 TFLGACRVHGNLELG---KHAAKMIIEQEPHDPAAYILLSNLYA 691


>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
          Length = 564

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 270/530 (50%), Gaps = 42/530 (7%)

Query: 288 CADSLLLREGRSVHGYAIRRLL-----GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           C  +  +R GR++H     RLL          + N L+  YS       A  +F  + P 
Sbjct: 27  CGRTGDIRRGRALHA----RLLLTGAAAASTFLANHLITMYSHCADAVSAVRVF-GVVPR 81

Query: 343 NDLVSWNSMISGLFKEMLYLCSQFSFSTLLA--ILPS----------CNSPESLEFGKSI 390
            +LVSW +++SGL +  ++  +  +F+ +    I P+            +  +   G  +
Sbjct: 82  PNLVSWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQL 141

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           HC  ++LGF N     + L  MY  CG L  A  +  ++    D   W  +I    +NG 
Sbjct: 142 HCIGIRLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQK-DAVTWTTMIDGYAKNGS 200

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            + AI  F+ M  +     D     + +SA G L+  + G+SLH   +K+   L+T V+N
Sbjct: 201 LEAAILIFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRN 260

Query: 511 ALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FE 566
           AL+ MY +  D+++AS V        N+ +   +I  + +      ALE +  L     E
Sbjct: 261 ALLDMYAKSGDLENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVE 320

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           PNE +  S++  C    +L  G Q+H  V       +SF+ S L+ MY NC         
Sbjct: 321 PNEFTFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQL 380

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 ++  AW+++I+ Y  HG GW AI+ F  M +SGIRP   + + LL+ACSH+GLV
Sbjct: 381 FNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLV 440

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           DEGL Y+++M + + + P+ EH+ CI+DM GR+G+L EA +FI  +P++P    W ++L 
Sbjct: 441 DEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLG 500

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AC   G+ ++G+  A+ L KL+P N G +ISLS +Y +LG+W+D   + K
Sbjct: 501 ACRMQGNKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLGQWEDVKAVKK 550



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 241/514 (46%), Gaps = 25/514 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           +++GR +H   +  G  A S+ L N  + MY+ C D  S+   F  +   + VSW T++S
Sbjct: 33  IRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLVSWTTLVS 92

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G + N+     L  F  M  +       +LSSA  A+A L     G  +H +GI+LG+++
Sbjct: 93  GLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCIGIRLGFDN 152

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +V+  ++L  MYS+CG +  A R F  M  KD V+W  +IDG+A NG  E A  +  +
Sbjct: 153 ELFVA--SNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAILIFRD 210

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+    V  D     + +S          GRS+H   I+     + ++ N+L+D Y+KS 
Sbjct: 211 MKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAKSG 270

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS-------TLLAIL 375
            L  A  + +      ++VS  S+I     +G  +E L   ++           T  +++
Sbjct: 271 DLENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPNEFTFASMI 330

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
             C   + LE G  +H   LK    +++   + L++MY NCG +  +  L   I + ++ 
Sbjct: 331 KGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTEI 390

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS-LH 494
           + WN VI    Q+GH   AI+ F  MT      P+ +T V +++AC +  L  EG    H
Sbjct: 391 A-WNAVINVYAQHGHGWGAIQAFDRMT-SSGIRPNHITFVCLLTACSHAGLVDEGLGYFH 448

Query: 495 GLALKSLMGLDTRVQN--ALITMYGRCRDIKSAST-VFESCYNCNLCTWNCMISAFS-QN 550
             ++K   G++ + ++   +I MYGR   +  A   + E     +   W  ++ A   Q 
Sbjct: 449 --SMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQG 506

Query: 551 KAEVRALELFRHLEFEPNEISI-VSILSACTQLG 583
             E+  +     ++ +PN   I +S+    T LG
Sbjct: 507 NKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLG 540



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 226/514 (43%), Gaps = 31/514 (6%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T YS+ +   S++ +F      ++V+W  +++  V+N      L  F  M    I   
Sbjct: 59  LITMYSHCADAVSAVRVFGVVPRPNLVSWTTLVSGLVQNSMHHDALAAFAAMRRAHIAPT 118

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L     A   ++  + G  +HC+ I+ G   +  + +   +MY+KCG L+ +   F 
Sbjct: 119 QFALSSAARAAAALSAPRPGTQLHCIGIRLGFDNELFVASNLADMYSKCGLLHEACRVFD 178

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELS 191
            M   D V+W T++ G   N   E  +L FR+M   G   AD     SA++AS  L +  
Sbjct: 179 QMPQKDAVTWTTMIDGYAKNGSLEAAILIFRDMKCEGLVGADQHVFCSALSASGGLKDGW 238

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF------WGMTCKDVVSW 245
           +G+ +H   IK G+E      V N+L+ MY++ GD+E A R        W     +VVS 
Sbjct: 239 FGRSLHCCIIKAGFELE--TVVRNALLDMYAKSGDLENASRVVSIDPGGW-----NVVSA 291

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            ++IDG+   G+ EEA +   E+   + VEP+  T  ++I  CA   LL +G  +H   +
Sbjct: 292 TSLIDGYVEAGRIEEALETYTELG-RQGVEPNEFTFASMIKGCAMHDLLEQGAQLHAQVL 350

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
           +  L  D  + ++L+  Y     +S +  LFN I    + ++WN++I+            
Sbjct: 351 KTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGYRTE-IAWNAVINVYAQHGHGWGAI 409

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHM 412
             F  M     + +  T + +L +C+    ++ G    H  +   G        + ++ M
Sbjct: 410 QAFDRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDM 469

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMTQQQNASPDS 471
           Y   G L  A   +  +        W  ++ AC   G+ +   +     M    N +   
Sbjct: 470 YGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQGNKELGEVAAQNLMKLDPNNTGIH 529

Query: 472 VTLVNVISACGNLE-LAFEGKSLHGLALKSLMGL 504
           ++L  + ++ G  E +    KS+  +++K L G 
Sbjct: 530 ISLSGIYTSLGQWEDVKAVKKSMKDISIKKLPGF 563



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 158/366 (43%), Gaps = 30/366 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +++L   YS       +  +F +   KD VTW  MI    +N  +   +  F
Sbjct: 149 GFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAILIF 208

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        +  SAL+    LK    GR +HC  IKAG   ++ + N  ++MY
Sbjct: 209 RDMKCEGLV--GADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP-----EKCLLYFREMGWSGEQAD 173
           AK GDL ++    S     D   WN + +  L + Y      E+ L  + E+G  G + +
Sbjct: 267 AKSGDLENASRVVS----IDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPN 322

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             + +S +   A    L  G  +HA  +K       +V  T  L+ MY  CG I  + + 
Sbjct: 323 EFTFASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGST--LVYMYGNCGLISLSLQL 380

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  +  ++WNA+I+ +A +G    A      M     + P+  T V L++ C+ + L
Sbjct: 381 FNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMT-SSGIRPNHITFVCLLTACSHAGL 439

Query: 294 LREG-------RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           + EG       +  HG   +          + ++D Y ++  L +AE   + +       
Sbjct: 440 VDEGLGYFHSMKDAHGIEPK------AEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAY 493

Query: 347 SWNSMI 352
           +W S++
Sbjct: 494 AWCSLL 499



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 2/141 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y N      SL LF E   +  + WNA+I    ++      +  F  M   GIR
Sbjct: 362 STLVYMYGNCGLISLSLQLFNEIGYRTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIR 421

Query: 71  FDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            +  T + +++A +    + +G    H +    G+   +   +  ++MY + G L+ +E 
Sbjct: 422 PNHITFVCLLTACSHAGLVDEGLGYFHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEK 481

Query: 130 TFSGMHCADTV-SWNTIMSGC 149
             S M    +  +W +++  C
Sbjct: 482 FISEMPVKPSAYAWCSLLGAC 502


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 285/547 (52%), Gaps = 36/547 (6%)

Query: 268 MQLMRSVEPDIATV-----VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +QL++S++P   +       +L+  C   L    G  +H + I+  L +D  + NSL+  
Sbjct: 44  LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 103

Query: 323 YSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
           Y K      +   +F+ +  + D++SW SMISG            LF +ML    + +  
Sbjct: 104 YFKLGTDFPETRKVFDGLF-VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           TL A++ +C+    L+ G+  H   L  GF +N +  +AL+ M+     L  A  L   +
Sbjct: 163 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 222

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               D  CW  +I A T+N  F EA++ F SM +     PD  T   V++ACGNL    +
Sbjct: 223 LE-PDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 281

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           GK +H   + +    +  V+++L+ MYG+C  +  +  +F+     N  +W+ ++  + Q
Sbjct: 282 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 341

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
           N      +++FR +E + +     +IL  C  L  +R GK++H      G   +  + SA
Sbjct: 342 NGDFKSVIQIFRKME-KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESA 400

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+D+Y+ C               ++   W+SMI  +  +G+G EA+ +F++M   GI+P 
Sbjct: 401 LVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPD 460

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             S I +L ACSH GLVDEG +Y+ +M ++Y ++   EH+ C+VD+LGR+G L+EA   I
Sbjct: 461 YISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILI 520

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +    +    +W A+L AC+   + ++ +++A+ + +LEP+    Y+ L+N+Y A+GRW 
Sbjct: 521 ETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWN 580

Query: 775 DAVEIGK 781
           DA+ I +
Sbjct: 581 DALRIRR 587



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 248/503 (49%), Gaps = 19/503 (3%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSECTFSGMHCA 137
           ++   T++     G  +H   IK+G+  D  + N  + +Y K G D   +   F G+   
Sbjct: 65  LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 124

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D +SW +++SG +    P   L  F +M   G + +  +LS+ + A + LG+L  G++ H
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 184

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            + +  G+ DS YV + ++LI M+ +   ++ A + F  +   D + W +II     N  
Sbjct: 185 GVVLGRGF-DSNYV-IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 242

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F+EA    + MQ    + PD  T  T+++ C +   L++G+ VH   I      ++++ +
Sbjct: 243 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVES 302

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFSTLL 372
           SL+D Y K  S+ +++ +F+ + P+ + VSW++++ G      FK ++ +  +     L 
Sbjct: 303 SLVDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY 361

Query: 373 ---AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
               IL +C    ++  GK +HC  ++ G   + I  +AL+ +Y  CG +  A ++  ++
Sbjct: 362 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 421

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +  + WN +I    QNG  +EA++ F  M  ++   PD ++ + ++ AC +  L  E
Sbjct: 422 PVRNLIT-WNSMIGGFAQNGRGEEALRIFNQMV-KEGIKPDYISFIGILFACSHRGLVDE 479

Query: 490 GKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISA 546
           G+  + +++    G+   +++   ++ + GR   ++ A  + E S +  +   W  ++ A
Sbjct: 480 GRE-YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGA 538

Query: 547 FSQ-NKAEVRALELFRHLEFEPN 568
            +     E+      R +E EP+
Sbjct: 539 CTTCTNYEIAERIAKRVMELEPD 561



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 245/505 (48%), Gaps = 38/505 (7%)

Query: 12  SLLTAYSNV-SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           SLLT Y  + + F  +  +F     KDV++W +MI+  V     +  L  F +M+  G+ 
Sbjct: 99  SLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE 158

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ TL  ++ A +++  LK GR+ H + +  G  ++  + +  ++M+ +   L+ +   
Sbjct: 159 PNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQL 218

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGE 189
           F  +   D + W +I+S    N++ ++ L +F  M    G   D  +  + + A   LG 
Sbjct: 219 FDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGR 278

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +HA  I  G+  +  V V +SL+ MY +CG +  ++R F  M  K+ VSW+A++
Sbjct: 279 LKQGKEVHAKVITTGFCGN--VVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALL 336

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+  NG F+    +  +M+     + D+    T++  CA    +R+G+ VH   IR+  
Sbjct: 337 GGYCQNGDFKSVIQIFRKME-----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 391

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+++ ++L+D Y+K   +  A+ +F+ + P+ +L++WNSMI G            +F 
Sbjct: 392 WRDVIVESALVDLYAKCGCIEYAQTIFDQM-PVRNLITWNSMIGGFAQNGRGEEALRIFN 450

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-----WQLKLGFSNNTIGVNALMHM 412
           +M+    +  + + + IL +C+    ++ G+         + +K+G  + +  V+ L   
Sbjct: 451 QMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGR- 509

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD-- 470
               G L  A  L++      D+S W  ++ ACT   +++ A +  K + + +   PD  
Sbjct: 510 ---AGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE---PDYH 563

Query: 471 --SVTLVNVISACGNLELAFEGKSL 493
              V L NV  A G    A   + L
Sbjct: 564 LSYVLLANVYKAVGRWNDALRIRRL 588



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 176/358 (49%), Gaps = 17/358 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF ++   +++L+  +      + +  LF E    D + W ++I+A   N      L F
Sbjct: 190 RGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRF 249

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M  + G+  D  T   +++A   +  LKQG+ VH   I  G   +  + +  V+MY 
Sbjct: 250 FYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYG 309

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG +  S+  F  M   ++VSW+ ++ G   N   +  +  FR+M    E+ D     +
Sbjct: 310 KCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGT 365

Query: 180 AVAASACLGELSYGKVIHALGI-KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +   A L  +  GK +H   I K G+ D   V V ++L+ +Y++CG IE A+  F  M 
Sbjct: 366 ILRTCAGLAAVRQGKEVHCQYIRKGGWRD---VIVESALVDLYAKCGCIEYAQTIFDQMP 422

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +++++WN++I GFA NG+ EEA  + ++M +   ++PD  + + ++  C+   L+ EGR
Sbjct: 423 VRNLITWNSMIGGFAQNGRGEEALRIFNQM-VKEGIKPDYISFIGILFACSHRGLVDEGR 481

Query: 299 SVHGYAIRRLLGYDLLM----MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               Y I     Y + +     + ++D   ++  L +AE+L       +D   W +++
Sbjct: 482 E---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 536



 Score = 45.8 bits (107), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 10/155 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    +   ++L+  Y+     E +  +F +   ++++TWN+MI    +N      L  
Sbjct: 389 KGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRI 448

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR-----VVHCLSIKAGMIADSSLCNVFV 115
           F +MV+EGI+ D  + + I+ A +    + +GR     +     IK G+   S +    V
Sbjct: 449 FNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCM----V 504

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGC 149
           ++  + G L  +E         D  S W  ++  C
Sbjct: 505 DLLGRAGLLEEAEILIETSDFRDDSSLWAALLGAC 539


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/653 (28%), Positives = 314/653 (48%), Gaps = 72/653 (11%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            K +H+  IK G+ +  ++ + N++IS+YS+C  I  A   F  M  +++VSW  ++   
Sbjct: 22  AKSLHSHIIKSGFCN--HIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVL 79

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +    EA  L +EM   +  +P+      ++  C     +  G+ VH +  +  L  D
Sbjct: 80  TNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVD 139

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIA------------------------------PM 342
           +++MN+L+D Y K  SL  A+ +F  I                               P 
Sbjct: 140 IVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPE 199

Query: 343 NDLVSWNSMISGL----------FKEMLY----LCSQFSFSTLLAILPSCNSPESLEFGK 388
            D+VSWNS+I+GL          F  M++       +F+F +   +L +C   + L  G+
Sbjct: 200 PDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPS---VLKACGCSDELMLGR 256

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS----CWNIVIVA 444
            IHC+ +K GF ++   ++AL+ MY +C  L  A  +  +   NS  S     WN ++  
Sbjct: 257 EIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSG 316

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
              NG + EA+     M  +     D  T   V+  C N +       +HG  + S   L
Sbjct: 317 HVVNGDYVEALSMISHM-HRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYEL 375

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--- 561
           D  V + LI +Y +   I +A  +FE   + ++  W+ +I+  ++  ++  A  LF    
Sbjct: 376 DCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMI 435

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-- 619
           HL  + +   I  +L AC+ L   +HGKQ+H      G++    +++AL+DMY+ C    
Sbjct: 436 HLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIE 495

Query: 620 -------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                          +W+S+I     +G+  EAI L H+M  SG +P K +++ +L+AC 
Sbjct: 496 DALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACR 555

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           HSGLV+E    +N++   + + P  EH+ C+VD+LG++G+ +EA + I  +P +P   +W
Sbjct: 556 HSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIW 615

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++L AC  + +  +   VAE L    PE+V  YI LSN+Y ALG W    ++
Sbjct: 616 SSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKV 668



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 166/629 (26%), Positives = 276/629 (43%), Gaps = 90/629 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H+    ++++ YS  S    +  +F E  ++++V+W  M++    +      L  +
Sbjct: 33  GFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLY 92

Query: 62  GEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM+E  I   +  L   ++ A   +  ++ G++VH    +A +  D  L N  ++MY K
Sbjct: 93  NEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVK 152

Query: 121 CGDLNSSECTFSGMHC-------------------------------ADTVSWNTIMSGC 149
           CG L  ++  F  + C                                D VSWN+I++G 
Sbjct: 153 CGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAG- 211

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           L +N   + L +   M   G + D  +  S + A  C  EL  G+ IH   IK G+E S 
Sbjct: 212 LVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSC 271

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-----WNAIIDGFALNGKFEEAFDL 264
           Y    ++LI MYS C  +  A + F        VS     WN+++ G  +NG + EA  +
Sbjct: 272 Y--CISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSM 329

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           +  M     V  D  T   ++ +C +   L     VHG+ I      D ++ + L+D Y+
Sbjct: 330 ISHMH-RSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYA 388

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K  S++ A  LF  + P  D+V+W+S+I+G            LF +M++L  Q     + 
Sbjct: 389 KQGSINNALRLFERL-PDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVIS 447

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +L +C+S  S + GK +H   LK G+ +  +   AL+ MY  CGD+  A SL   +S  
Sbjct: 448 IVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLS-E 506

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            DT  W  +IV C QNG  +EAI     M  +    P+ +T++ V++AC +  L  E   
Sbjct: 507 IDTMSWTSIIVGCAQNGRAEEAISLLHKMI-ESGTKPNKITILGVLTACRHSGLVEEAWD 565

Query: 493 LHGLALKSLMGLDTRVQNALITMYG--RCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
                          V N++ T +G   C +                  +NCM+    Q 
Sbjct: 566 ---------------VFNSIETNHGLIPCPE-----------------HYNCMVDILGQA 593

Query: 551 KAEVRALELFRHLEFEPNEISIVSILSAC 579
                A++L   + F+P++    S+L AC
Sbjct: 594 GRFEEAVKLISEMPFKPDKTIWSSLLGAC 622



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 160/646 (24%), Positives = 280/646 (43%), Gaps = 103/646 (15%)

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           +   +K  + +H   IK+G      + N  +++Y+KC  +  +   F  M   + VSW T
Sbjct: 15  RFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTT 74

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELSYGKVI--HALGI 201
           ++S   +++ P + L  + EM  S  EQ +    S+ + A   +  +  GK++  H    
Sbjct: 75  MVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQA 134

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           KL  +    + + N+L+ MY +CG +  A+R F  + CK+  SWN +I G+A  G  ++A
Sbjct: 135 KLDVD----IVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190

Query: 262 FDLLHEMQLMRSVEPDIATVVTLIS----------------------------------- 286
             L  +M      EPDI +  ++I+                                   
Sbjct: 191 MKLFDKMP-----EPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKA 245

Query: 287 -LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI----AP 341
             C+D L+L  GR +H Y I+         +++L+D YS    LS+A  +F+      + 
Sbjct: 246 CGCSDELML--GREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSV 303

Query: 342 MNDLVSWNSMISGL-----FKEMLYLCS-------QFSFSTLLAILPSCNSPESLEFGKS 389
              L  WNSM+SG      + E L + S       +F F T   +L  C + ++L     
Sbjct: 304 SESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQ 363

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +H + +  G+  + +  + L+ +Y   G +  A  L +R+  + D   W+ +I  C + G
Sbjct: 364 VHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFG 422

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             + A   F  M        D   +  V+ AC +L     GK +H L LK     +  V 
Sbjct: 423 SDKLAFSLFMDMI-HLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVT 481

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFE 566
            ALI MY +C DI+ A ++F      +  +W  +I   +QN     A+ L   +     +
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---- 622
           PN+I+I+ +L+AC                 H G  E ++      D++++ ++N      
Sbjct: 542 PNKITILGVLTACR----------------HSGLVEEAW------DVFNSIETNHGLIPC 579

Query: 623 ---WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
              ++ M+   G  G+  EA++L  EM     +P K+   SLL AC
Sbjct: 580 PEHYNCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSSLLGAC 622



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 219/514 (42%), Gaps = 79/514 (15%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           ++  +S+H + I+      + ++N+++  YSK +S+  A  +F+ + P  ++VSW +M+S
Sbjct: 19  IKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEM-PHRNIVSWTTMVS 77

Query: 354 ------------GLFKEM----LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
                        L+ EM    +   +QF +S   A+L +C    ++E GK +H    + 
Sbjct: 78  VLTNSSMPHEALSLYNEMIESKIEQPNQFLYS---AVLKACGLVRNVELGKMVHYHIFQA 134

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
               + + +NAL+ MY+ CG L  A  +   I   + TS WN +I+   + G   +A+K 
Sbjct: 135 KLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATS-WNTLILGYAKQGLIDDAMKL 193

Query: 458 FKSMTQQ-------------QNASP----------------DSVTLVNVISACGNLELAF 488
           F  M +               NAS                 D  T  +V+ ACG  +   
Sbjct: 194 FDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELM 253

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-----SCYNCNLCTWNCM 543
            G+ +H   +KS         +ALI MY  C+ +  A+ +F+     S  + +L  WN M
Sbjct: 254 LGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSM 313

Query: 544 ISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
           +S    N   V AL +  H+      F+    SIV  L  C     L    Q+HG V   
Sbjct: 314 LSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIV--LKICMNFDNLSLASQVHGFVITS 371

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
           G++ +  + S L+D+Y+                 K   AWSS+I+     G    A  LF
Sbjct: 372 GYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLF 431

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            +M + G++     +  +L ACS       G Q ++  L++     E      ++DM  +
Sbjct: 432 MDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKK-GYESEGVVTTALIDMYAK 490

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
            G +++A      L  +     W +++  C+ +G
Sbjct: 491 CGDIEDALSLFGCLS-EIDTMSWTSIIVGCAQNG 523



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 180/424 (42%), Gaps = 68/424 (16%)

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C    S++  KS+H   +K GF N+   +N ++ +Y  C  ++ A ++   + H +  S 
Sbjct: 13  CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVS- 71

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSLH 494
           W  ++   T +    EA+  +  M + +   P+      V+ ACG   N+EL   GK +H
Sbjct: 72  WTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVEL---GKMVH 128

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
               ++ + +D  + NAL+ MY +C  ++ A  VF      N  +WN +I  +++     
Sbjct: 129 YHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLID 188

Query: 555 RALELF------------------------RHLEF---------EPNEISIVSILSACTQ 581
            A++LF                        R L F         + +E +  S+L AC  
Sbjct: 189 DAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK--------------------SNA 621
              L  G++IH ++   GF+ + +  SAL+DMYS+CK                    S A
Sbjct: 249 SDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
            W+SM+S +  +G   EA+ +   M  SG+R    +   +L  C +   +    Q +  +
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV 368

Query: 682 LE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           +    E D    +     ++D+  + G +  A    + LP       W ++++ C+  G 
Sbjct: 369 ITSGYELDCVVGS----ILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFGS 423

Query: 739 TKMG 742
            K+ 
Sbjct: 424 DKLA 427



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 21/357 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+      ++L LF    +KDVV W+++IT C       +    F +M+  G++ D
Sbjct: 383 LIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQID 442

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              + I++ A + +   + G+ VH L +K G  ++  +    ++MYAKCGD+  +   F 
Sbjct: 443 HFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFG 502

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   DT+SW +I+ GC  N   E+ +    +M  SG + + +++   + A    G +  
Sbjct: 503 CLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEE 562

Query: 193 G-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIID 250
              V +++    G    P     N ++ +  Q G  E A +    M  K D   W++++ 
Sbjct: 563 AWDVFNSIETNHGLIPCP--EHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLL- 619

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA-----DSL-LLRE-----GRS 299
           G     K  +  +++ E  L  S E D++  + L ++ A     DS+  +RE     G+ 
Sbjct: 620 GACGTYKNRDLANIVAEHLLATSPE-DVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKK 678

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSN-SLSKAELLFNAIAPMNDLVSWNSMISGL 355
             G  I   + +    M  L   ++K   +    ++++  + P  DLVSWN++I+GL
Sbjct: 679 RAG-KIFYEIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEP--DLVSWNNVIAGL 732



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/273 (18%), Positives = 106/273 (38%), Gaps = 25/273 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G+ +    +T+L+  Y+     E +L+LF      D ++W ++I  C +N      +  
Sbjct: 472 KGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISL 531

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
             +M+E G + +  T+L +++A      +++   V + +    G+I      N  V++  
Sbjct: 532 LHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILG 591

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC---------------LHNNYPEKCLLYFR 163
           + G    +    S M    D   W++++  C               L    PE   +Y  
Sbjct: 592 QAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIM 651

Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ 223
                       S+S        +G+   GK+ + +  K  + +  ++         +++
Sbjct: 652 LSNVYAALGMWDSVSKVRETVKKIGKKRAGKIFYEIPFKFYFMEHLHLG--------HAK 703

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
            G      +  + +   D+VSWN +I G A N 
Sbjct: 704 QGLNGGVVKVIYPILEPDLVSWNNVIAGLADNA 736


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 188/662 (28%), Positives = 323/662 (48%), Gaps = 93/662 (14%)

Query: 209 PYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           P++S   +   +++ Y  CG  + A      +T    V WN +I      G+ + A ++ 
Sbjct: 46  PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 105

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
             M L      D  T+  ++  C +    R G + HG         ++ + N+L+  YS+
Sbjct: 106 CRM-LRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 164

Query: 326 SNSLSKAELLFNAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS-- 369
             SL +A ++F+ I    ++D++SWNS++S             LF +M  +  +   +  
Sbjct: 165 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 224

Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
               +++ ILP+C S +++   K +H   ++ G   +    NAL+  Y  CG +  A  +
Sbjct: 225 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 284

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-------------------- 465
              +    D   WN ++   +Q+G+F+ A + FK+M ++                     
Sbjct: 285 FNMMEFK-DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 343

Query: 466 --------------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR--- 507
                          + P+ VT+++V+SAC +L    +G  +H  +LK+ L+ LD     
Sbjct: 344 SHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGG 403

Query: 508 ------VQNALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALEL 559
                 V NALI MY +CR  K+A ++F+       N+ TW  MI   +Q      AL+L
Sbjct: 404 EDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKL 463

Query: 560 FRHLEFEP-----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLD 612
           F  +  EP     N  +I  IL AC  L  +R GKQIH +V      ++S  F+++ L++
Sbjct: 464 FVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLIN 523

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               KS  +W+SM++ YG HG+G EA+++F +M  +G  P   +
Sbjct: 524 MYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 583

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            + +L ACSH G+VD+GL Y+++M  +Y + P  EH+   +D+L R G+L +A++ +K++
Sbjct: 584 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDM 643

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   VW A+LSAC  H + ++ +     L ++  EN G Y  +SN+Y   GRWKD  
Sbjct: 644 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 703

Query: 778 EI 779
            I
Sbjct: 704 RI 705



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 167/728 (22%), Positives = 311/728 (42%), Gaps = 137/728 (18%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F++     T ++ +Y      + +L +         V WN +I   ++   +   ++   
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M+  G R D  TL  ++ A  ++   + G   H L    G  ++  +CN  V MY++CG
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 123 DLNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW------SGEQAD 173
            L  +   F  +      D +SWN+I+S  + ++     L  F +M        + E++D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAER 232
            +S+ + + A   L  +   K +H   I+ G + D   V V N+LI  Y++CG +E A +
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD---VFVGNALIDAYAKCGLMENAVK 283

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ----------------------- 269
            F  M  KDVVSWNA++ G++ +G F+ AF+L   M+                       
Sbjct: 284 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGC 343

Query: 270 -----------LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL--------- 309
                      +     P+  T+++++S CA      +G  +H Y+++  L         
Sbjct: 344 SHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGG 403

Query: 310 -GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG------------ 354
              DL++ N+L+D YSK  S   A  +F+ I P+ +  +V+W  MI G            
Sbjct: 404 EDEDLMVYNALIDMYSKCRSFKAARSIFDDI-PLEERNVVTWTVMIGGHAQYGDSNDALK 462

Query: 355 LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT--IGVNAL 409
           LF EM+   Y  +  ++ T+  IL +C    ++  GK IH + L+    +++     N L
Sbjct: 463 LFVEMISEPYGVAPNAY-TISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 521

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY  CGD+  A  +   +S  S  S W  ++     +G   EA+  F  M ++    P
Sbjct: 522 INMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKM-RKAGFVP 579

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKS 524
           D +T + V+ AC +  +  +G S    ++ +  GL  R ++      L+  +GR      
Sbjct: 580 DDITFLVVLYACSHCGMVDQGLSYFD-SMSADYGLTPRAEHYAYAIDLLARFGRLD---- 634

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV 584
                                         +A +  + +  EP  +  V++LSAC     
Sbjct: 635 ------------------------------KAWKTVKDMPMEPTAVVWVALLSAC----- 659

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
                ++H +V      E++   + L++M  N +++ +++ + + Y   G+  +   + H
Sbjct: 660 -----RVHSNV---ELAEHAL--NKLVEM--NAENDGSYTLISNIYATAGRWKDVARIRH 707

Query: 645 EMCNSGIR 652
            M  SGI+
Sbjct: 708 LMKKSGIK 715


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 298/582 (51%), Gaps = 56/582 (9%)

Query: 252 FALNGK-----FEEAFDLLHEMQLMRSVEPDIATVV------TLISLCADSLLLREGRSV 300
           F LN K     F++   L+ ++ ++ + EP + T +       L+  C D  L  E R +
Sbjct: 28  FPLNDKDKSVGFQKNHSLI-QLNVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMI 86

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG+ ++     DL +M  L++ YSK   +  A  +F+ + P  ++ +W ++++G      
Sbjct: 87  HGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNL-PRRNVNAWTTLLTGYVQNSH 145

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF +ML   +  S  TL  +L +C+S +S+EFGK +H + +K     +T   N+
Sbjct: 146 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 205

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L   Y     L  A     +I    D   W  VI +C  NG    ++  F  M       
Sbjct: 206 LSSFYSKFRRLEFAIKAF-KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSD-GMK 263

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  TL +V+SAC  +     G  +H L++K   G    ++N+++ +Y +C  +  A  +
Sbjct: 264 PNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKL 323

Query: 529 FESCYNCNLCTWNCMISAFSQ-----------NKAEVRALELFRHLE---FEPNEISIVS 574
           FE     NL TWN MI+  ++           +K+   AL +F+ L     +P+  +  S
Sbjct: 324 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSS 383

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           +LS C+ L  L  G+QIHG +   G   +  + +AL+ MY+ C               ++
Sbjct: 384 VLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRT 443

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W+SMI+ +  HG   +A++LF +M   GI+P + + + +LSACSH+GL DE L Y+ 
Sbjct: 444 MISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFE 503

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            M ++Y+++P  +H  C++DM  R G+++EA++ +  +  +P   +W  +++ C  HG +
Sbjct: 504 LMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKS 563

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +G   AE L KL+P++V  Y+SL NM+++ GRWKD  ++ K
Sbjct: 564 DLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRK 605



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 235/474 (49%), Gaps = 32/474 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   T L+  YS     ES+  +F     ++V  W  ++T  V+N   ++ L  F
Sbjct: 94  GFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLF 153

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+E G    + TL I+++A + +  ++ G+ VH   IK  +  D+S+ N   + Y+K 
Sbjct: 154 IKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKF 213

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  +   D +SW +++S C  N    + L +F +M   G + +  +L+S +
Sbjct: 214 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 273

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   +  L  G  IH+L IKLGY  S  + + NS++ +Y +CG +  A++ F GM   +
Sbjct: 274 SACCVMLTLDLGAQIHSLSIKLGYGSS--ILIKNSIMYLYLKCGWLIEAQKLFEGMETLN 331

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHE---------MQLMRS-VEPDIATVVTLISLCADS 291
           +V+WNA+I G A      E     H+          +L RS ++PD+ T  +++S+C++ 
Sbjct: 332 LVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNL 391

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + L +G  +HG  I+  +  D+++  +L+  Y+K  S+ KA   F  + P   ++SW SM
Sbjct: 392 VALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEM-PSRTMISWTSM 450

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKSIHCWQL 395
           I+G            LF++M  +  + +  T + +L +C+    + E+L +       Q 
Sbjct: 451 ITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY---FELMQK 507

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +            L+ MY+  G +  AF ++ +++   + + W+++I  C  +G
Sbjct: 508 QYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 561



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 256/545 (46%), Gaps = 49/545 (8%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G R +S+    ++      N   + R++H   +K G   D  +    VN+Y+KCG + S+
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   +  +W T+++G + N++P   L  F +M  +G    N +L   + A + L
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             + +GK +HA  IK  Y      S+ NSL S YS+   +E A +AF  +  KDV+SW +
Sbjct: 179 QSIEFGKQVHAYLIK--YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I     NG+   +     +M L   ++P+  T+ +++S C   L L  G  +H  +I+ 
Sbjct: 237 VISSCCDNGQAARSLSFFMDM-LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKL 295

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------- 359
             G  +L+ NS+M  Y K   L +A+ LF  +  +N LV+WN+MI+G  K M        
Sbjct: 296 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLN-LVTWNAMIAGHAKMMDLAEDDVA 354

Query: 360 --------------LYLCSQ----FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                         LY        F+FS++L++   C++  +LE G+ IH   +K G   
Sbjct: 355 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSV---CSNLVALEQGEQIHGQIIKSGVLA 411

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           + +   AL+ MY  CG +  A      +   +  S W  +I    ++G  Q+A++ F+ M
Sbjct: 412 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHGLSQQALQLFEDM 470

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITM 515
            +     P+ VT V V+SAC +  LA E      L    LM     ++        LI M
Sbjct: 471 -RLVGIKPNQVTFVGVLSACSHAGLADE-----ALYYFELMQKQYNIKPVMDHFACLIDM 524

Query: 516 YGRCRDIKSA-STVFESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEI-SI 572
           Y R   ++ A   V +  +  N   W+ +I+   S  K+++      + L+ +P ++ + 
Sbjct: 525 YLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETY 584

Query: 573 VSILS 577
           VS+L+
Sbjct: 585 VSLLN 589


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 173/513 (33%), Positives = 270/513 (52%), Gaps = 37/513 (7%)

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           R +H  A+      D  + ++L   Y   +  + A  +F+A+ P  D V WN++++GL  
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAV-PSPDTVLWNTLLAGLSG 201

Query: 356 ------FKEMLYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 F  M    S    ST LA +LP+     +   G+ +H +  K G + +   V  
Sbjct: 202 SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTG 261

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  CGD+  A  L  R+    D   +N +I   + NG    +++ FK +       
Sbjct: 262 LISLYAKCGDMECARHLFDRM-EGPDLVTYNALISGYSINGMVGSSVELFKELVGM-GLR 319

Query: 469 PDSVTLVNVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           P S TLV +I   S  G+  LA     LH   +K+ +  +  V  AL T+Y R  D+ SA
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLA---GCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSA 376

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
              F++     + +WN MIS ++QN     A+ LF+ ++     PN ++I S LSAC QL
Sbjct: 377 RRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQL 436

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---------------AWSSMI 627
           G L  GK +H  + +   + N ++ +AL+DMY  C S A               +W+ MI
Sbjct: 437 GALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMI 496

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           S YG HG+G EA++L+ +M ++ + PT S+ +S+L ACSH GLV EG   + +M  +Y +
Sbjct: 497 SGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGI 556

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHHGDTKMGKQVA 746
            P  EH  C+VD+LGR+G+L+EA+E I   P     PG+WGA+L AC  H D  + K  +
Sbjct: 557 TPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLAS 616

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + LF+LEPEN GYY+ LSN+Y +  ++ +A  +
Sbjct: 617 QKLFELEPENTGYYVLLSNLYTSKKQYSEAAVV 649



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 235/505 (46%), Gaps = 33/505 (6%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R +H L++ +G  AD+ + +    +Y      N +   F  +   DTV WNT+++G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--- 199

Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
           +  E    + R  G    + D+ +L+S + A+A +   + G+ +HA G K G     +  
Sbjct: 200 SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEH-- 257

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V   LIS+Y++CGD+E A   F  M   D+V++NA+I G+++NG    + +L  E+  M 
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGM- 316

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            + P  +T+V LI + +          +H + ++  L  +  +  +L   Y + N +  A
Sbjct: 317 GLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSA 376

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
              F+A+ P   + SWN+MISG            LF++M  L  + +  T+ + L +C  
Sbjct: 377 RRAFDAM-PEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQ 435

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +L  GK +H          N   + AL+ MY+ CG +  A  +   +  N +   WN+
Sbjct: 436 LGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMD-NKNVVSWNV 494

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I     +G   EA+K +K M    +  P S T ++V+ AC +  L  EG ++   ++ S
Sbjct: 495 MISGYGLHGQGAEALKLYKDM-MDAHLHPTSSTFLSVLYACSHGGLVKEGTTVF-RSMTS 552

Query: 501 LMGLDTRVQN--ALITMYGRCRDIKSASTVFESCYNCNLCT--WNCMISAFSQNK----A 552
             G+   +++   ++ + GR   +K A  +        +    W  ++ A   +K    A
Sbjct: 553 DYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612

Query: 553 EVRALELFRHLEFEPNEISIVSILS 577
           ++ + +LF   E EP       +LS
Sbjct: 613 KLASQKLF---ELEPENTGYYVLLS 634



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 213/459 (46%), Gaps = 23/459 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A    +++L   Y  +S    +  +F    + D V WN ++     +      L  F
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE----ALEAF 208

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M   G +R DSTTL  ++ A  ++     GR VH    K G+     +    +++YAK
Sbjct: 209 VRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAK 268

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD+  +   F  M   D V++N ++SG   N      +  F+E+   G +  + +L + 
Sbjct: 269 CGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVAL 328

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +  G       +HA  +K G + +    V+ +L ++Y +  D+++A RAF  M  K
Sbjct: 329 IPVHSPFGHEPLAGCLHAHVVKAGLDAN--APVSTALTTLYCRFNDMDSARRAFDAMPEK 386

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            + SWNA+I G+A NG  E A  L  +MQ + +V P+  T+ + +S CA    L  G+ V
Sbjct: 387 TMESWNAMISGYAQNGLTEMAVALFQQMQAL-NVRPNPLTISSALSACAQLGALSLGKWV 445

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H       L  ++ +M +L+D Y K  S+++A  +F+++   N +VSWN MISG      
Sbjct: 446 HKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKN-VVSWNVMISGYGLHGQ 504

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVN 407
                 L+K+M+      + ST L++L +C+    ++ G ++        G +       
Sbjct: 505 GAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCT 564

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVAC 445
            ++ +    G L  AF L+     ++     W  ++ AC
Sbjct: 565 CMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGAC 603


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 166/560 (29%), Positives = 291/560 (51%), Gaps = 38/560 (6%)

Query: 255 NGKFEEAFDLLHEMQ---LMRSVEPDIATVVTLISLCADSLLLREGRSVHG-YAIRRLLG 310
           +G  +EA D L       ++ S +   A  V L+  C     +  GR +H   +      
Sbjct: 80  SGNLKEALDFLQRESDDVVLDSAQRSEAMGV-LLQACGQRKDIEVGRRLHEMVSASTQFC 138

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST 370
            D ++   ++  YS   S S + ++F+ +   N L  WN+++S   +  L+  +   FS 
Sbjct: 139 NDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN-LFQWNAIVSAYTRNELFEDAMSIFSE 197

Query: 371 LLAI---------LP----SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           L+++         LP    +C     L  G+ IH    K+   ++    NAL+ MY  CG
Sbjct: 198 LISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCG 257

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A   +  +      S WN ++    QN   ++A+  +  MT      PD  T+ ++
Sbjct: 258 LVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS-GLDPDWFTIGSL 316

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC  ++    G+ +HG AL++ + +D  +  +L+++Y  C    +A  +F+   + +L
Sbjct: 317 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSL 376

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN MI+ +SQN     A+ LFR +     +P EI+I+ +  AC+QL  LR GK++H  
Sbjct: 377 VSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCF 436

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
                  E+ F+SS+++DMY+                 K  A+W+ +I+ YG HG+G EA
Sbjct: 437 ALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEA 496

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +ELF +M   G++P   +   +L ACSH+GLV++GL+Y+N ML  +++ P+ EH+ C+VD
Sbjct: 497 LELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD 556

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           MLGR+G++ +A   I+ +P  P   +W ++LS+C  HG+  +G++VA  L +LEPE    
Sbjct: 557 MLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPEN 616

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ +SN++   G+W D   +
Sbjct: 617 YVLISNLFAGSGKWDDVRRV 636



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 264/587 (44%), Gaps = 60/587 (10%)

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALG----IKLGYEDSPYVSVTNS--------- 216
            ++D+V L SA  + A       G ++ A G    I++G      VS +           
Sbjct: 92  RESDDVVLDSAQRSEA------MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNT 145

Query: 217 -LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
            +I+MYS CG    +   F  +  K++  WNAI+  +  N  FE+A  +  E+  +   +
Sbjct: 146 RIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK 205

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T+  +I  CA  L L  G+ +HG A +  L  D+ + N+L+  Y K   + +A   
Sbjct: 206 PDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKR 265

Query: 336 FNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPSCNSPES 383
              +     + SWN+++ G       ++ L L  Q + S       T+ ++L +C+  +S
Sbjct: 266 VFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKS 325

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L +G+ IH + L+ G + +     +L+ +YI CG   AA  L   + H S  S WN++I 
Sbjct: 326 LHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS-WNVMIA 384

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
             +QNG   EAI  F+ M       P  + ++ V  AC  L     GK LH  ALK+ + 
Sbjct: 385 GYSQNGLPDEAINLFRQML-SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT 443

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR-- 561
            D  V +++I MY +   I  +  +F+     ++ +WN +I+ +  +     ALELF   
Sbjct: 444 EDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKM 503

Query: 562 -HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN 620
             L  +P++ +   IL AC+  G++  G +    + +L   E                  
Sbjct: 504 LRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL--------------- 548

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             ++ ++   G  G+  +A+ L  EM      P      SLLS+C   G +  G +  N 
Sbjct: 549 EHYTCVVDMLGRAGRIDDALRLIEEMPGD---PDSRIWSSLLSSCRIHGNLGLGEKVANK 605

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPG 724
           +LE    +P  E++V I ++   SGK  +       +K++ +Q   G
Sbjct: 606 LLELEPEKP--ENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAG 650



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 234/490 (47%), Gaps = 20/490 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EG 68
           +T ++T YS       S  +F +   K++  WNA+++A   N      +  F E++    
Sbjct: 144 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTE 203

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS- 127
            + D+ TL  ++ A   +  L  G+++H ++ K  +++D  + N  + MY KCG +  + 
Sbjct: 204 HKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAV 263

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F  M      SWN ++ G   N+ P K L  + +M  SG   D  ++ S + A + +
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L YG+ IH   ++ G    P++ +  SL+S+Y  CG   AA+  F GM  + +VSWN 
Sbjct: 324 KSLHYGEEIHGFALRNGLAVDPFIGI--SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 381

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G++ NG  +EA +L  +M L   ++P    ++ +   C+    LR G+ +H +A++ 
Sbjct: 382 MIAGYSQNGLPDEAINLFRQM-LSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 440

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  D+ + +S++D Y+K   +  ++ +F+ +    D+ SWN +I+G            L
Sbjct: 441 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALEL 499

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYI 414
           F++ML L  +    T   IL +C+    +E G       L L            ++ M  
Sbjct: 500 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLG 559

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G +  A  L++ +  + D+  W+ ++ +C  +G+     K    + + +   P++  L
Sbjct: 560 RAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVL 619

Query: 475 V-NVISACGN 483
           + N+ +  G 
Sbjct: 620 ISNLFAGSGK 629



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 226/480 (47%), Gaps = 34/480 (7%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV------NMYAKCGDLNS 126
           S  + +++ A  Q   ++ GR +H +     + A +  CN FV       MY+ CG  + 
Sbjct: 105 SEAMGVLLQACGQRKDIEVGRRLHEM-----VSASTQFCNDFVLNTRIITMYSMCGSPSD 159

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASA 185
           S   F  +   +   WN I+S    N   E  +  F E+   +  + DN +L   + A A
Sbjct: 160 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 219

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
            L +L  G++IH +  K+      +V   N+LI+MY +CG + EA +R F  M  K V S
Sbjct: 220 GLLDLGLGQIIHGMATKMDLVSDVFVG--NALIAMYGKCGLVEEAVKRVFDLMDTKTVSS 277

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WNA++ G+A N    +A DL  +M     ++PD  T+ +L+  C+    L  G  +HG+A
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMT-DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFA 336

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           +R  L  D  +  SL+  Y        A++LF+ +     LVSWN MI+G          
Sbjct: 337 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGME-HRSLVSWNVMIAGYSQNGLPDEA 395

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF++ML    Q     ++ +  +C+   +L  GK +HC+ LK   + +    ++++ M
Sbjct: 396 INLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDM 455

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G +  +  +  R+    D + WN++I     +G  +EA++ F+ M  +    PD  
Sbjct: 456 YAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGRGKEALELFEKML-RLGLKPDDF 513

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T   ++ AC +  L  +G       L +L  ++ ++++   ++ M GR   I  A  + E
Sbjct: 514 TFTGILMACSHAGLVEDGLEYFNQML-NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIE 572


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 183/644 (28%), Positives = 312/644 (48%), Gaps = 44/644 (6%)

Query: 171 QADNVSLSSAVAASACLGEL--SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           Q D  +LS     + C G L    G+ +H   +K G  D  +VSV  SL+ MY +  ++ 
Sbjct: 90  QPDESTLSCVF--NICAGSLDGKLGRQVHCQCVKFGLVD--HVSVGTSLVDMYMKTENVN 145

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
              R F  M  ++VVSW +++ G++ NG +   ++L  +MQ    V P+  TV T+I+  
Sbjct: 146 DGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQY-EGVLPNRYTVSTVIAAL 204

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
            +  ++  G  VH   ++      + + NSL+  YS+   L  A  +F+ +  + D V+W
Sbjct: 205 VNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKME-IRDWVTW 263

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           NSMI+G            +F +M     + +  T  +++ SC S   L   K + C  LK
Sbjct: 264 NSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALK 323

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF+ + I + ALM     C ++  A SL   +    +   W  +I  C QNG   +A+ 
Sbjct: 324 SGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVN 383

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M +++   P+  T     SA   +        +H   +K+     + V  AL+  Y
Sbjct: 384 LFSQM-RREGVKPNHFTY----SAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAY 438

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
            +  +   A  VFE     +L  W+ M++ ++Q      A +LF  L  E   PNE +  
Sbjct: 439 VKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFS 498

Query: 574 SILSAC-TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
           S+++AC +       GKQ H +   +       +SSAL+ MY+                 
Sbjct: 499 SVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKE 558

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           +   +W+SMIS Y  HG+  +A+E+F EM    +     + I +++AC+H+GLV++G +Y
Sbjct: 559 RDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKY 618

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +N+M+ ++ + P  +H+ C++D+  R+G L++A   I  +P  P   VW  +L A   H 
Sbjct: 619 FNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHR 678

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + ++G+  AE L  L+PE+   Y+ LSNMY A G W++   + K
Sbjct: 679 NVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRK 722



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 185/758 (24%), Positives = 350/758 (46%), Gaps = 67/758 (8%)

Query: 42  NAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK 101
           N ++ +   ++     L+ F  ++   ++ D +TL  + +        K GR VHC  +K
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121

Query: 102 AGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLY 161
            G++   S+    V+MY K  ++N     F  M   + VSW ++++G   N         
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           F +M + G   +  ++S+ +AA    G +  G  +HA+ +K G+E++  + V NSLIS+Y
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEA--IPVFNSLISLY 239

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
           S+ G +  A   F  M  +D V+WN++I G+  NG+  E F++ ++MQL   V+P   T 
Sbjct: 240 SRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA-GVKPTHMTF 298

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
            ++I  CA    L   + +   A++     D +++ +LM   SK   +  A  LF+ +  
Sbjct: 299 ASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEE 358

Query: 342 MNDLVSWNSMISG------------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEF 386
             ++VSW +MISG            LF +M       + F++S +L +           F
Sbjct: 359 GKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV-------F 411

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
              +H   +K  +  ++    AL+  Y+  G+ + A  + + I    D   W+ ++    
Sbjct: 412 VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFE-IIEAKDLMAWSAMLAGYA 470

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLD 505
           Q G  +EA K F  +  ++   P+  T  +VI+AC +   A E GK  H  A+K  +   
Sbjct: 471 QTGETEEAAKLFHQLI-KEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNA 529

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE- 564
             V +AL+TMY +  +I SA  VF+     +L +WN MIS +SQ+    +ALE+F  ++ 
Sbjct: 530 LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589

Query: 565 --FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA 622
              + + ++ + +++ACT  G++  G++              + +S + D + N  +   
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQK--------------YFNSMINDHHIN-PTMKH 634

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           +S MI  Y   G   +A+ + +EM      P  +   +LL A      V+ G      ++
Sbjct: 635 YSCMIDLYSRAGMLEKAMGIINEM---PFPPGATVWRTLLGAARVHRNVELGELAAEKLI 691

Query: 683 EEYDVRPE-TEHHVCIVDMLGRSGKLQE---AYEFIKNLPIQPKPG---------VWGAM 729
               ++PE +  +V + +M   +G  QE     + +    ++ +PG          +  +
Sbjct: 692 ---SLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFL 748

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
               +H    ++  +++EL  +L  ++ GY     N++
Sbjct: 749 AGDLTHPLSNQIYSKLSELSIRL--KDAGYQPDTKNVF 784



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 138/596 (23%), Positives = 277/596 (46%), Gaps = 33/596 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + H+   TSL+  Y           +F E   ++VV+W +++     N         F
Sbjct: 123 GLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELF 182

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T+  +++AL     +  G  VH + +K G      + N  +++Y++ 
Sbjct: 183 CQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRL 242

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  M   D V+WN++++G + N    +    F +M  +G +  +++ +S +
Sbjct: 243 GMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVI 302

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCK 240
            + A L EL+  K++    +K G+       V  +L+   S+C +++ A   F  M   K
Sbjct: 303 KSCASLRELALVKLMQCKALKSGFTTDQI--VITALMVALSKCKEMDDALSLFSLMEEGK 360

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW A+I G   NG  ++A +L  +M+    V+P+  T   ++++     +      +
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMR-REGVKPNHFTYSAILTVHYPVFV----SEM 415

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+        +  +L+D Y K  +   A  +F  I    DL++W++M++G      
Sbjct: 416 HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEA-KDLMAWSAMLAGYAQTGE 474

Query: 355 ------LFKEML---YLCSQFSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSNNTI 404
                 LF +++      ++F+FS+   ++ +C SP  + E GK  H + +K+  +N   
Sbjct: 475 TEEAAKLFHQLIKEGIKPNEFTFSS---VINACASPTAAAEQGKQFHAYAIKMRLNNALC 531

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +AL+ MY   G++ +A  + +R     D   WN +I   +Q+G  ++A++ F  M Q+
Sbjct: 532 VSSALVTMYAKRGNIDSAHEVFKR-QKERDLVSWNSMISGYSQHGQAKKALEVFDEM-QK 589

Query: 465 QNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           +N   D+VT + VI+AC +  L  +G K  + +     +    +  + +I +Y R   ++
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649

Query: 524 SASTVF-ESCYNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
            A  +  E  +      W  ++ A   ++  E+  L   + +  +P + +   +LS
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLS 705


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 194/620 (31%), Positives = 308/620 (49%), Gaps = 52/620 (8%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           + H   IKLG     Y   TN+++S Y++C  G +  A   F  M+ +D V+WN +I G+
Sbjct: 20  ITHCQTIKLGRSADIYA--TNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGY 77

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G    A++L   M+    + PD  T  +++   A +  L  G+ VH   ++  +GY+
Sbjct: 78  VNSGSLGSAWELYKSMKSF-GLMPDAYTFGSILKGVACACRLDVGQQVHSLIVK--MGYE 134

Query: 313 --LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLYLC 363
             +   ++L+D Y+K   +  A ++F  I P  + VSWN++I+G   E        L  C
Sbjct: 135 EHVYAGSALLDMYAKCERVRDAFMVFKCI-PRRNSVSWNALIAGFVLEGDHDTAFWLLRC 193

Query: 364 --------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
                      +FS LL +L   +  +  +    +HC  +K G   +    NA +  Y  
Sbjct: 194 MEEEGVRLDDGTFSPLLTLL---DEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQ 250

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG L  A  +      + D   WN ++ A   +   + A K F  M QQ    PD  T  
Sbjct: 251 CGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDM-QQFGFEPDIYTYT 309

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY--GRCRDIKSASTVFESCY 533
            +ISAC + +    GKSLHGL +K  +     + NA+I MY       ++ A  VF S  
Sbjct: 310 TIISACSHKD---NGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSME 366

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQ 590
           + +  +WN +++ FSQ      AL+LF H+ F   +I   +  ++L +C+ L  L+ G+Q
Sbjct: 367 SKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQ 426

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH      GF+ N F++S+L+ MYS C                S+  W+S++ AY  HG+
Sbjct: 427 IHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQ 486

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G  A+ LF +M +  ++    + ++ L+ACSH GLV++G     +M  +Y + P  EH+ 
Sbjct: 487 GDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYA 546

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C VD+ GR+G L EA   I+++P  P   VW  +L AC   GD ++  QVA  L +LEPE
Sbjct: 547 CAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPE 606

Query: 756 NVGYYISLSNMYVALGRWKD 775
               Y+ LSNMY  L RW +
Sbjct: 607 EHCTYVILSNMYGHLKRWDE 626



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 174/659 (26%), Positives = 297/659 (45%), Gaps = 62/659 (9%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           + HC +IK G  AD    N  ++ Y +C  G L  +   F  M   DTV+WNT++SG ++
Sbjct: 20  ITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVN 79

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           +         ++ M   G   D  +  S +   AC   L  G+ +H+L +K+GYE+  Y 
Sbjct: 80  SGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYA 139

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
              ++L+ MY++C  +  A   F  +  ++ VSWNA+I GF L G  + AF LL  M+  
Sbjct: 140 G--SALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCME-E 196

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V  D  T   L++L  +    +    +H   I+  + +D  + N+ +  YS+  SL  
Sbjct: 197 EGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLED 256

Query: 332 AELLFNAIAPMNDLVSWNSMISGL---------FKEMLYLCSQFSFS----TLLAILPSC 378
           AE +F+      DLV+WNSM++           FK  L +  QF F     T   I+ +C
Sbjct: 257 AERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDM-QQFGFEPDIYTYTTIISAC 315

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG-----DLVAAFSLLQRISHNS 433
           +  ++   GKS+H   +K G        NA++ MY+        D +  F  ++    + 
Sbjct: 316 SHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSME----SK 368

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN ++   +Q GH + A+K F  M +      D      V+ +C +L     G+ +
Sbjct: 369 DRVSWNSILTGFSQTGHSENALKLFVHM-RFAVVDIDHYAFSAVLRSCSDLATLQLGQQI 427

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H L +KS    +  V ++LI MY +C  I+ A   FE     +  TWN ++ A++Q+   
Sbjct: 428 HVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQG 487

Query: 554 VRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL LF   R  + + + I+ V+ L+AC+ +G++  G+               ++  ++
Sbjct: 488 DVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGR---------------YLLKSM 532

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
              Y        ++  +  +G  G   EA  L   M      P      +LL AC   G 
Sbjct: 533 ASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESM---PFDPDAMVWKTLLGACRACGD 589

Query: 671 VDEGLQYYNNMLEEYDVRPETEH--HVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPG 724
           ++   Q  +++LE   + PE EH  +V + +M G   +  E       ++   ++  PG
Sbjct: 590 IELAAQVASHLLE---LEPE-EHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPG 644



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 166/600 (27%), Positives = 286/600 (47%), Gaps = 37/600 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLA--LFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           G  A +  + ++L+ Y+  S    + A  LF E  ++D VTWN MI+  V +  +     
Sbjct: 29  GRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWE 88

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +  M   G+  D+ T   I+  +     L  G+ VH L +K G        +  ++MYA
Sbjct: 89  LYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYA 148

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC  +  +   F  +   ++VSWN +++G +     +      R M   G + D+ + S 
Sbjct: 149 KCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSP 208

Query: 180 AVAASACLGELSYGKV---IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            +     L E  + K+   +H   IK G +     +V N+ I+ YSQCG +E AER F G
Sbjct: 209 LL---TLLDEKKFYKLTMQLHCKIIKHGVQFDN--TVCNATITSYSQCGSLEDAERVFDG 263

Query: 237 -MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  +D+V+WN+++  F  + + E AF L  +MQ     EPDI T  T+IS C+      
Sbjct: 264 AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQF-GFEPDIYTYTTIISACSHK---D 319

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFY--SKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            G+S+HG  I+R L   + + N+++  Y  S SNS+  A  +F+++    D VSWNS+++
Sbjct: 320 NGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMES-KDRVSWNSILT 378

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF  M +           A+L SC+   +L+ G+ IH   +K GF +
Sbjct: 379 GFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFES 438

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N    ++L+ MY  CG +  A    ++ + +S  + WN ++ A  Q+G    A+  F  M
Sbjct: 439 NDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSIT-WNSIMFAYAQHGQGDVALGLFFQM 497

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRC 519
            + +    D +T V  ++AC ++ L  +G+ L   ++ S  G+  R+++    + ++GR 
Sbjct: 498 -RDKKVKMDHITFVAALTACSHIGLVEQGRYLLK-SMASDYGISPRMEHYACAVDLFGRA 555

Query: 520 RDIKSASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRH-LEFEPNEISIVSILS 577
             +  A  + ES  ++ +   W  ++ A         A ++  H LE EP E     ILS
Sbjct: 556 GYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILS 615



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/382 (18%), Positives = 167/382 (43%), Gaps = 18/382 (4%)

Query: 1   RGFLAHLPTSTSLLTAY--SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG    +P   +++  Y  S+ +  E +L +F+   +KD V+WN+++T   +       L
Sbjct: 331 RGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENAL 390

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F  M    +  D      ++ + + +  L+ G+ +H L++K+G  ++  + +  + MY
Sbjct: 391 KLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMY 450

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KCG +  +  +F       +++WN+IM     +   +  L  F +M     + D+++  
Sbjct: 451 SKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFV 510

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +A+ A + +G +  G+ +    +   Y  SP +      + ++ + G ++ A+     M 
Sbjct: 511 AALTACSHIGLVEQGRYL-LKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMP 569

Query: 239 CK-DVVSWNAIIDGFALNGKFEEAFDLL-HEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
              D + W  ++      G  E A  +  H ++L    EP+      ++S     L   +
Sbjct: 570 FDPDAMVWKTLLGACRACGDIELAAQVASHLLEL----EPEEHCTYVILSNMYGHLKRWD 625

Query: 297 -----GRSVHGYAIRRLLGYDLL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
                 R +    ++++ G+  + + N +  F +     S  E ++  +  + + + W  
Sbjct: 626 EKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIKWLD 685

Query: 351 MISG---LFKEMLYLCSQFSFS 369
            ++G   L  ++ Y  + F++S
Sbjct: 686 SVAGSDSLLDDVDYSYTYFNYS 707


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 192/649 (29%), Positives = 324/649 (49%), Gaps = 41/649 (6%)

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E C  Y  +M  +G Q  + +L  ++  +     + +GK IHA  +K G++     S  N
Sbjct: 32  EACSRY-HQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDS--LTSTGN 88

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           S    Y + G +++A   F  M  +D VSWN +I G    G  +       + +++ + E
Sbjct: 89  SXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVI-AFE 147

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P+++T+V  I  C     + EG  +HGY IR        + NSL+  Y+  N + +AE L
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA-DNDMERAEEL 206

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPSCNSPE 382
           F+ +    D++SW+ MI G            LF EM      +    T++++L +C +  
Sbjct: 207 FDEMCE-RDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTG 265

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            +  G+S+H   +  G   +    N+++ MY    D  +AF     +    +T  WN +I
Sbjct: 266 DISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEMPCR-NTVSWNSII 324

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               +     EA+  F SM +      D VTLVN++ +C      F+ K +H + ++   
Sbjct: 325 SGLVRTEKHSEALSLFYSMGKA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGY 383

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            L+  V N+LI  Y +C  I+ A  +F+     +  +W+ MI+ F+       A+ LF+ 
Sbjct: 384 ELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 443

Query: 563 L---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +   + +PN ++I+S+L A +    L+  K  HG     G      + +A+LDMY+ C  
Sbjct: 444 MNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGE 503

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K+  +W +MI+A G +G   +A+ L  EM   G++P   + +S+LSA
Sbjct: 504 IGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSA 563

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP--IQPK 722
           CSH GLV+EGL ++ NM++++ V P  EH+ C+VDML R+GKL  A   I+ +P  ++  
Sbjct: 564 CSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDG 623

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
            G+WGA+LSAC   G++++G   A  +  LEP++   Y   S+MY A G
Sbjct: 624 AGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLASSMYAASG 672



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 195/692 (28%), Positives = 318/692 (45%), Gaps = 51/692 (7%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M + G +    TL+  +        ++ G+ +H   +K G  + +S  N   + Y K
Sbjct: 37  YHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMK 96

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L+S+   F  M   D+VSWN ++ G L     +  L +FR+      + +  +L  A
Sbjct: 97  TGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLA 156

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LG +  G  +H   I+ G+ D P  SV NSL+SMY+   D+E AE  F  M  +
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIP--SVQNSLLSMYAD-NDMERAEELFDEMCER 213

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV+SW+ +I G+   G+   A  L  EM     +E D  T+V+++  CA++  +  GRSV
Sbjct: 214 DVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSV 273

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
           HG  I R L YDL + NS++D YSK +    A   FN + P  + VSWNS+ISGL +   
Sbjct: 274 HGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKAFNEM-PCRNTVSWNSIISGLVRTEK 332

Query: 358 -----EMLYLCSQFSFS----TLLAILPSCN---SPESLEFGKSIHCWQLKLGFSNNTIG 405
                 + Y   +  F     TL+ +L SC     P   +F   IH   ++ G+  N   
Sbjct: 333 HSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHSIVIRWGYELNEFV 389

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
           +N+L+  Y  C  +  A+ L  R+    DT  W+ +I      G   EAI  F+ M Q Q
Sbjct: 390 INSLIDAYSKCDLIELAWKLFDRLK-TKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQ 448

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P+ VT+++++ A          K  HG+ ++  +  +  V  A++ MY +C +I  +
Sbjct: 449 E-KPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLS 507

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
              F+     N+ +W  MI+A   N     AL L   ++    +PN ++ +S+LSAC+  
Sbjct: 508 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHG 567

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
           G++  G         L F EN      ++  +        +S M+      GK   A+ L
Sbjct: 568 GLVEEG---------LSFFEN------MVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNL 612

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDML 701
             +M    +R       +LLSAC  SG    G      +L    + P++   +     M 
Sbjct: 613 IEKMPER-MRDGAGLWGALLSACRSSGNSRLGAGAAXRVLX---LEPQSSAGYFLASSMY 668

Query: 702 GRSGKLQ---EAYEFIKNLPIQPKPG-VWGAM 729
             SG +    +A+ F+      P+ G +WG +
Sbjct: 669 AASGLVHVEDKAWRFVAGDESHPRAGEIWGVV 700



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 232/474 (48%), Gaps = 39/474 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL       SLL+ Y++ +  E +  LF E C +DV++W+ MI   V+     M L  F
Sbjct: 180 GFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLF 238

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM     I  D  T++ ++ A      +  GR VH + I  G+  D  + N  ++MY+K
Sbjct: 239 LEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSK 298

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             D  S+   F+ M C +TVSWN+I+SG +      + L  F  MG +G +AD V+L + 
Sbjct: 299 XDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNL 358

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +     +    K IH++ I+ GYE + +  V NSLI  YS+C  IE A + F  +  K
Sbjct: 359 LQSCKYFVDPFQCKFIHSIVIRWGYELNEF--VINSLIDAYSKCDLIELAWKLFDRLKTK 416

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSW+A+I GF   GK +EA  L  EM   +  +P+  T+++L+   + S  L+  +  
Sbjct: 417 DTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQE-KPNGVTILSLLEAFSVSADLKRSKWA 475

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HG  IRR L  ++ +  +++D Y+K   +  +   F+ I P  ++VSW +MI+     GL
Sbjct: 476 HGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI-PEKNIVSWGAMIAACGMNGL 534

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI---G 405
            ++ L L S+           T L++L +C+    +E G         L F  N +   G
Sbjct: 535 ARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEG---------LSFFENMVQDHG 585

Query: 406 VNA-------LMHMYINCGDLVAAFSLLQRISH--NSDTSCWNIVIVACTQNGH 450
           V         ++ M    G L  A +L++++          W  ++ AC  +G+
Sbjct: 586 VEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSGN 639



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 243/508 (47%), Gaps = 24/508 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +   T  S    Y      +S+L +F    ++D V+WN MI   +       GL +
Sbjct: 78  QGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWW 137

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +        + +TL++ + A   +  +++G  +H   I++G +   S+ N  ++MYA 
Sbjct: 138 FRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD 197

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
             D+  +E  F  M   D +SW+ ++ G +        L  F EM  +   + D +++ S
Sbjct: 198 -NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIELDGITMVS 256

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A  G++S G+ +H + I  G +   +V   NS+I MYS+  D E+A +AF  M C
Sbjct: 257 VLKACANTGDISMGRSVHGVVICRGLDYDLFVG--NSIIDMYSKXDDHESAFKAFNEMPC 314

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ VSWN+II G     K  EA  L + M        D  T+V L+  C   +   + + 
Sbjct: 315 RNTVSWNSIISGLVRTEKHSEALSLFYSMG-KAGFRADEVTLVNLLQSCKYFVDPFQCKF 373

Query: 300 VHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +H   IR   GY+L   ++NSL+D YSK + +  A  LF+ +    D VSW++MI+G   
Sbjct: 374 IHSIVIR--WGYELNEFVINSLIDAYSKCDLIELAWKLFDRLK-TKDTVSWSAMIAGFNH 430

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    LF+EM     + +  T+L++L + +    L+  K  H   ++ G +     
Sbjct: 431 CGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEVAV 490

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             A++ MY  CG++  +     +I   +  S W  +I AC  NG  ++A+     M +  
Sbjct: 491 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVS-WGAMIAACGMNGLARDALALLSEM-KLH 548

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSL 493
              P+ VT ++V+SAC +  L  EG S 
Sbjct: 549 GLKPNXVTTLSVLSACSHGGLVEEGLSF 576


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 299/598 (50%), Gaps = 45/598 (7%)

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL-LHEMQLMRSVEPDIATVVT 283
           G +  A   F  +   DV ++N +I  ++ +     A  L L+   L   V P+  T   
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
            +  C+       GR++H +AI   L  DL +  +L+D Y K   L  A  +F A  P  
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF-ATMPAR 189

Query: 344 DLVSWNSMISGLFKEMLY-------LCSQFSF-------STLLAILPSCNSPESLEFGKS 389
           DLV+WN+M++G     +Y       L  Q          STL+A+LP      +L  G S
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 390 IHCWQLKLGFSNN-------TIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +H + ++     N       T GV    AL+ MY  CG L+ A  +   +   ++ + W+
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WS 308

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I          +A   FK+M  Q        ++ + + AC +L+    G+ LH L  K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           S +  D    N+L++MY +   I  A  +F+     +  +++ ++S + QN     A  +
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F+ ++    EP+  ++VS++ AC+ L  L+HG+  HG V   G    + I +AL+DMY+ 
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +   +W++MI+ YG HG G EA  LF EM N G  P   + I L
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHSGLV EG  +++ M   Y + P  EH++C+VD+L R G L EAYEFI+++P++ 
Sbjct: 549 LSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
              VW A+L AC  + +  +GK+V+ ++ +L PE  G ++ LSN+Y A GR+ +A E+
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 244/522 (46%), Gaps = 45/522 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HF 60
           G  A L  ST+LL  Y   +    +  +F     +D+V WNAM+     +      + H 
Sbjct: 155 GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 214

Query: 61  FG-EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---------- 109
              +M    +R +++TL+ ++  L Q   L QG  VH   I+A +  + +          
Sbjct: 215 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 274

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L    ++MYAKCG L  +   F  M   + V+W+ ++ G +  +   +  L F+ M   G
Sbjct: 275 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 334

Query: 170 E-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
                  S++SA+ A A L  L  G+ +HAL  K G      ++  NSL+SMY++ G I+
Sbjct: 335 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD--LTAGNSLLSMYAKAGLID 392

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A   F  M  KD VS++A++ G+  NG+ EEAF +  +MQ   +VEPD AT+V+LI  C
Sbjct: 393 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPAC 451

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +    L+ GR  HG  I R L  +  + N+L+D Y+K   +  +  +FN + P  D+VSW
Sbjct: 452 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN-MMPSRDIVSW 510

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N+MI+G            LF EM  L       T + +L +C+    +  GK    W   
Sbjct: 511 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH---WFHV 567

Query: 397 LGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +G   +  G+   M  YI   DL++       A+  +Q +   +D   W  ++ AC    
Sbjct: 568 MG---HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYK 624

Query: 450 HFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
           +     K    M Q+     + + V L N+ SA G  + A E
Sbjct: 625 NIDLG-KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 37/492 (7%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVM--GLHFFGEMVEEGIRFDSTTL---LIIVSAL 83
           LF +  + DV T+N +I A   +       GLH +  M+   +  ++ T    L   SAL
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
              +C   GR +H  +I AG+ AD  +    ++MY KC  L  +   F+ M   D V+WN
Sbjct: 139 ADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWN 195

Query: 144 TIMSGCLHNNYPEKCLLYF--REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
            +++G  H+      + +    +M     + +  +L + +   A  G L+ G  +HA  I
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCI 255

Query: 202 KLGYED--------SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           +             +  V +  +L+ MY++CG +  A R F  M  ++ V+W+A+I GF 
Sbjct: 256 RACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFV 315

Query: 254 LNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           L  +  +AF L   M  Q +  + P   ++ + +  CA    LR G  +H    +  +  
Sbjct: 316 LCSRMTQAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHALLAKSGVHA 373

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           DL   NSL+  Y+K+  + +A  LF+ +A + D VS+++++SG            +FK+M
Sbjct: 374 DLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAEEAFLVFKKM 432

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                +   +T+++++P+C+   +L+ G+  H   +  G ++ T   NAL+ MY  CG +
Sbjct: 433 QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRI 492

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             +  +   +  + D   WN +I     +G  +EA   F  M       PD VT + ++S
Sbjct: 493 DLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMN-NLGFPPDGVTFICLLS 550

Query: 480 ACGNLELAFEGK 491
           AC +  L  EGK
Sbjct: 551 ACSHSGLVIEGK 562


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 285/547 (52%), Gaps = 36/547 (6%)

Query: 268 MQLMRSVEPDIATV-----VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +QL++S++P   +       +L+  C   L    G  +H + I+  L +D  + NSL+  
Sbjct: 103 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 162

Query: 323 YSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
           Y K      +   +F+ +  + D++SW SMISG            LF +ML    + +  
Sbjct: 163 YFKLGTDFPETRKVFDGLF-VKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           TL A++ +C+    L+ G+  H   L  GF +N +  +AL+ M+     L  A  L   +
Sbjct: 222 TLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL 281

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               D  CW  +I A T+N  F EA++ F SM +     PD  T   V++ACGNL    +
Sbjct: 282 LE-PDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 340

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           GK +H   + +    +  V+++L+ MYG+C  +  +  +F+     N  +W+ ++  + Q
Sbjct: 341 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 400

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
           N      +++FR +E + +     +IL  C  L  +R GK++H      G   +  + SA
Sbjct: 401 NGDFKSVIQIFRKME-KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESA 459

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+D+Y+ C               ++   W+SMI  +  +G+G EA+ +F++M   GI+P 
Sbjct: 460 LVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPD 519

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             S I +L ACSH GLVDEG +Y+ +M ++Y ++   EH+ C+VD+LGR+G L+EA   I
Sbjct: 520 YISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILI 579

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +    +    +W A+L AC+   + ++ +++A+ + +LEP+    Y+ L+N+Y A+GRW 
Sbjct: 580 ETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWN 639

Query: 775 DAVEIGK 781
           DA+ I +
Sbjct: 640 DALRIRR 646



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 248/503 (49%), Gaps = 19/503 (3%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSECTFSGMHCA 137
           ++   T++     G  +H   IK+G+  D  + N  + +Y K G D   +   F G+   
Sbjct: 124 LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 183

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D +SW +++SG +    P   L  F +M   G + +  +LS+ + A + LG+L  G++ H
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 243

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            + +  G+ DS YV + ++LI M+ +   ++ A + F  +   D + W +II     N  
Sbjct: 244 GVVLGRGF-DSNYV-IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDF 301

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           F+EA    + MQ    + PD  T  T+++ C +   L++G+ VH   I      ++++ +
Sbjct: 302 FDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVES 361

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFSTLL 372
           SL+D Y K  S+ +++ +F+ + P+ + VSW++++ G      FK ++ +  +     L 
Sbjct: 362 SLVDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY 420

Query: 373 ---AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
               IL +C    ++  GK +HC  ++ G   + I  +AL+ +Y  CG +  A ++  ++
Sbjct: 421 CFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQM 480

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
              +  + WN +I    QNG  +EA++ F  M  ++   PD ++ + ++ AC +  L  E
Sbjct: 481 PVRNLIT-WNSMIGGFAQNGRGEEALRIFNQMV-KEGIKPDYISFIGILFACSHRGLVDE 538

Query: 490 GKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISA 546
           G+  + +++    G+   +++   ++ + GR   ++ A  + E S +  +   W  ++ A
Sbjct: 539 GRE-YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGA 597

Query: 547 FSQ-NKAEVRALELFRHLEFEPN 568
            +     E+      R +E EP+
Sbjct: 598 CTTCTNYEIAERIAKRVMELEPD 620



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 245/505 (48%), Gaps = 38/505 (7%)

Query: 12  SLLTAYSNV-SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           SLLT Y  + + F  +  +F     KDV++W +MI+  V     +  L  F +M+  G+ 
Sbjct: 158 SLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE 217

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ TL  ++ A +++  LK GR+ H + +  G  ++  + +  ++M+ +   L+ +   
Sbjct: 218 PNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQL 277

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGE 189
           F  +   D + W +I+S    N++ ++ L +F  M    G   D  +  + + A   LG 
Sbjct: 278 FDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGR 337

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +HA  I  G+  +  V V +SL+ MY +CG +  ++R F  M  K+ VSW+A++
Sbjct: 338 LKQGKEVHAKVITTGFCGN--VVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALL 395

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+  NG F+    +  +M+     + D+    T++  CA    +R+G+ VH   IR+  
Sbjct: 396 GGYCQNGDFKSVIQIFRKME-----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 450

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+++ ++L+D Y+K   +  A+ +F+ + P+ +L++WNSMI G            +F 
Sbjct: 451 WRDVIVESALVDLYAKCGCIEYAQTIFDQM-PVRNLITWNSMIGGFAQNGRGEEALRIFN 509

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-----WQLKLGFSNNTIGVNALMHM 412
           +M+    +  + + + IL +C+    ++ G+         + +K+G  + +  V+ L   
Sbjct: 510 QMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGR- 568

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD-- 470
               G L  A  L++      D+S W  ++ ACT   +++ A +  K + + +   PD  
Sbjct: 569 ---AGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELE---PDYH 622

Query: 471 --SVTLVNVISACGNLELAFEGKSL 493
              V L NV  A G    A   + L
Sbjct: 623 LSYVLLANVYKAVGRWNDALRIRRL 647



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 176/358 (49%), Gaps = 17/358 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF ++   +++L+  +      + +  LF E    D + W ++I+A   N      L F
Sbjct: 249 RGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRF 308

Query: 61  FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M  + G+  D  T   +++A   +  LKQG+ VH   I  G   +  + +  V+MY 
Sbjct: 309 FYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYG 368

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG +  S+  F  M   ++VSW+ ++ G   N   +  +  FR+M    E+ D     +
Sbjct: 369 KCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGT 424

Query: 180 AVAASACLGELSYGKVIHALGI-KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +   A L  +  GK +H   I K G+ D   V V ++L+ +Y++CG IE A+  F  M 
Sbjct: 425 ILRTCAGLAAVRQGKEVHCQYIRKGGWRD---VIVESALVDLYAKCGCIEYAQTIFDQMP 481

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +++++WN++I GFA NG+ EEA  + ++M +   ++PD  + + ++  C+   L+ EGR
Sbjct: 482 VRNLITWNSMIGGFAQNGRGEEALRIFNQM-VKEGIKPDYISFIGILFACSHRGLVDEGR 540

Query: 299 SVHGYAIRRLLGYDLLM----MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               Y I     Y + +     + ++D   ++  L +AE+L       +D   W +++
Sbjct: 541 E---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALL 595



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 10/145 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y+     E +  +F +   ++++TWN+MI    +N      L  F +MV+EGI+
Sbjct: 458 SALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIK 517

Query: 71  FDSTTLLIIVSALTQMNCLKQGR-----VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            D  + + I+ A +    + +GR     +     IK G+   S +    V++  + G L 
Sbjct: 518 PDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCM----VDLLGRAGLLE 573

Query: 126 SSECTFSGMHCADTVS-WNTIMSGC 149
            +E         D  S W  ++  C
Sbjct: 574 EAEILIETSDFRDDSSLWAALLGAC 598


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 197/629 (31%), Positives = 321/629 (51%), Gaps = 55/629 (8%)

Query: 194 KVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           K IHA L +  G++    +SV + LI++YSQ  D  +A          + V WN+II   
Sbjct: 68  KRIHASLIVSSGFQP---LSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSH 124

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G F  A      M+ +          +   ++ +    +  G +VH  A++   G D
Sbjct: 125 VDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQD 184

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           +   N++++ Y K  S+  A  LF+ +    DLVSW S+ISG            LF +M 
Sbjct: 185 VYFGNTMLEVYVKCGSIGNASKLFDEMTH-RDLVSWTSIISGYIYGESFSRGFKLFNKMR 243

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG--- 417
                 S  T++ +L +C++ ES+  G+ +H + +K GF  +    N+++ MY   G   
Sbjct: 244 MEMEPNSV-TMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSG 302

Query: 418 -DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV- 475
            ++   FS ++      D   WNI+I   +  G   E  + F  M ++  +S +S+TLV 
Sbjct: 303 EEVETFFSEIEE----RDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVV 358

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYN 534
           + I+ C NL    EG  LH  A+K+  GL DT +   L+ +Y +C  ++ ++ +F    +
Sbjct: 359 SAIANCANLS---EGGMLHCSAIKT--GLHDTVLMTCLLALYAKCGALEISAQLFRDIPH 413

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQI 591
            N  TW+ M+S F+QN     A+EL++ +     +PN   I +++ A T LG L+ GK  
Sbjct: 414 RNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKAT 473

Query: 592 HGHVFH----LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           H            ++++ + ++LL+MY  C               K    W+SMI  +G 
Sbjct: 474 HAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGT 533

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG  +EA++ F  M  S ++P   + +SLLSACSHSGLV EG + +++M   + + P+  
Sbjct: 534 HGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLN 593

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LGRSGKL+EA   I  L   P   +WGA+L+A   H D K+G+  AE L +L
Sbjct: 594 HYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLEL 653

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
           EP+NVGYY   SN+  +L RW +  E+ +
Sbjct: 654 EPDNVGYYTLWSNIEASLERWGEVEEVRR 682



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 263/545 (48%), Gaps = 37/545 (6%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           S L   N L+  + +H   I +      S+ +  + +Y++  D  S+    +     +TV
Sbjct: 56  SLLHSCNNLQALKRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTV 115

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG-ELSYGKVIHAL 199
            WN+I+   + +      LL +  M   G   D+ +      A   LG  + YG+ +H +
Sbjct: 116 IWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCV 175

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            +K+G+    Y    N+++ +Y +CG I  A + F  MT +D+VSW +II G+     F 
Sbjct: 176 AMKMGFGQDVYFG--NTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFS 233

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
             F L ++M++   +EP+  T+V ++  C+    + EGR +H Y I++    D  + NS+
Sbjct: 234 RGFKLFNKMRM--EMEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSI 291

Query: 320 MDFYSKS-NSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFKEMLYLCSQF 366
           +  Y+K+  S  + E  F+ I    D++SWN +I            +  F EM    +  
Sbjct: 292 LRMYTKTGGSGEEVETFFSEIEE-RDIISWNILIAFYSFRGDIAEVAERFNEMRREVTS- 349

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  +L  ++ +  +  +L  G  +HC  +K G  ++T+ +  L+ +Y  CG L  +  L 
Sbjct: 350 SIESLTLVVSAIANCANLSEGGMLHCSAIKTGL-HDTVLMTCLLALYAKCGALEISAQLF 408

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ---QQNASPDSVTLVNVISACGN 483
           + I H +  + W+ ++   TQNG F+EAI+ ++ M     Q N    S TLV   +  G 
Sbjct: 409 RDIPHRNSIT-WSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIIS-TLVIAYTHLGA 466

Query: 484 LELAFEGKSLHGLALKSLMGLDTR----VQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           L+L   GK+ H   +++L          ++ +L+ MY RC  I SA   F      ++ T
Sbjct: 467 LQL---GKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVT 523

Query: 540 WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  MI  F  +     AL+ F+ +   E +PN ++ +S+LSAC+  G++R G ++  H  
Sbjct: 524 WTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVF-HSM 582

Query: 597 HLGFQ 601
             GF+
Sbjct: 583 KWGFR 587



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 160/595 (26%), Positives = 285/595 (47%), Gaps = 36/595 (6%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  ++ L+T YS ++ F S+ ++       + V WN++I + V++      L  +G M E
Sbjct: 83  LSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRE 142

Query: 67  EGIRFDSTTLLIIVSALTQMNC-LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            G+  DS T  II  A+  + C ++ G  VHC+++K G   D    N  + +Y KCG + 
Sbjct: 143 LGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIG 202

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           ++   F  M   D VSW +I+SG ++     +    F +M    E  ++V++   + A +
Sbjct: 203 NASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRMEME-PNSVTMVVMLQACS 261

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
               ++ G+ +H+  IK G+      SV NS++ MY++ G   E  E  F  +  +D++S
Sbjct: 262 AFESVNEGRELHSYVIKKGFMVDR--SVQNSILRMYTKTGGSGEEVETFFSEIEERDIIS 319

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I  ++  G   E  +  +EM+  R V   I ++  ++S  A+   L EG  +H  A
Sbjct: 320 WNILIAFYSFRGDIAEVAERFNEMR--REVTSSIESLTLVVSAIANCANLSEGGMLHCSA 377

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEM 359
           I+  L +D ++M  L+  Y+K  +L  +  LF  I P  + ++W+SM+S     G FKE 
Sbjct: 378 IKTGL-HDTVLMTCLLALYAKCGALEISAQLFRDI-PHRNSITWSSMMSGFTQNGFFKEA 435

Query: 360 LYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLK----LGFSNNTIGVNA 408
           + L  Q   S L         ++ +     +L+ GK+ H + ++        ++     +
Sbjct: 436 IELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETS 495

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MYI CG + +A     R+    D   W  +I     +G   EA+K FKSM + +   
Sbjct: 496 LLNMYIRCGSISSALICFNRVV-VKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESE-VQ 553

Query: 469 PDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           P+SVT ++++SAC +  L  EG +  H +     +  D      ++ + GR   +K A T
Sbjct: 554 PNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALT 613

Query: 528 VFESCYNC-NLCTWNCMISAF----SQNKAEVRALELFRHLEFEPNEISIVSILS 577
           V      C +   W  +++A      +   E  A +L   LE EP+ +   ++ S
Sbjct: 614 VILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKL---LELEPDNVGYYTLWS 665



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 216/462 (46%), Gaps = 27/462 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    ++L  Y       ++  LF E  ++D+V+W ++I+  +       G   F
Sbjct: 180 GFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLF 239

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  E +  +S T+++++ A +    + +GR +H   IK G + D S+ N  + MY K 
Sbjct: 240 NKMRME-MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKT 298

Query: 122 GDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-SLSS 179
           G      E  FS +   D +SWN +++         +    F EM    E   ++ SL+ 
Sbjct: 299 GGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEM--RREVTSSIESLTL 356

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            V+A A    LS G ++H   IK G  D+  ++    L+++Y++CG +E + + F  +  
Sbjct: 357 VVSAIANCANLSEGGMLHCSAIKTGLHDTVLMTC---LLALYAKCGALEISAQLFRDIPH 413

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ ++W++++ GF  NG F+EA +L  +M L   ++P+   + TL+        L+ G++
Sbjct: 414 RNSITWSSMMSGFTQNGFFKEAIELYQQM-LASGLQPNHDIISTLVIAYTHLGALQLGKA 472

Query: 300 VHGYAIRRLLGY----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            H + IR L  +       +  SL++ Y +  S+S A + FN +  + D+V+W SMI G 
Sbjct: 473 THAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVV-VKDVVTWTSMIEGF 531

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNN 402
                       FK ML    Q +  T L++L +C+    +  G +  H  +       +
Sbjct: 532 GTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPD 591

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
                 ++ +    G L  A +++ ++    D+  W  ++ A
Sbjct: 592 LNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAA 633



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 175/358 (48%), Gaps = 7/358 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFY-ETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF+       S+L  Y+        +  F+ E   +D+++WN +I        +     
Sbjct: 279 KGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAE 338

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F EM  E +     +L ++VSA+     L +G ++HC +IK G+  D+ L    + +YA
Sbjct: 339 RFNEMRRE-VTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGL-HDTVLMTCLLALYA 396

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG L  S   F  +   ++++W+++MSG   N + ++ +  +++M  SG Q ++  +S+
Sbjct: 397 KCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIIST 456

Query: 180 AVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            V A   LG L  GK  HA  I+    + +     +  SL++MY +CG I +A   F  +
Sbjct: 457 LVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRV 516

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             KDVV+W ++I+GF  +G   EA      M L   V+P+  T ++L+S C+ S L+REG
Sbjct: 517 VVKDVVTWTSMIEGFGTHGLAFEALKFFKSM-LESEVQPNSVTFLSLLSACSHSGLVREG 575

Query: 298 RSV-HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             V H       +  DL     ++D   +S  L +A  +   +    D   W ++++ 
Sbjct: 576 CEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAA 633


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/600 (28%), Positives = 300/600 (50%), Gaps = 67/600 (11%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++I  Y+  G +  A + F+    +  ++W+++I G+   G   EA +L  EMQ     
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQY-EGE 134

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+  T  +++ +C+  +LL +G+ +H +AI+     +  ++  L+D Y+K   + +AE 
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEY 194

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCN 379
           LF       + V W +M++G             F++M      C+QF+F +   IL +C 
Sbjct: 195 LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPS---ILTACG 251

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S  +  FG  +H   ++ GF  N    +AL+ MY  CGDL  A  +L+ +  +   S WN
Sbjct: 252 SISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVS-WN 310

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +IV C + G  +EA+  F+ M   ++   D  T  +V++    +       S+H L +K
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIM-HLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVK 369

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           +       V NAL+ MY +      A  VFE   + ++ +W  +++    N +   AL L
Sbjct: 370 TGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 429

Query: 560 F---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F   R +   P++I I ++LSAC +L VL  GKQ+H +    G   +  + ++L+ MY+ 
Sbjct: 430 FCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAK 489

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               +    W+++I  Y  +G+G +                       
Sbjct: 490 CGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD----------------------- 526

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
                H+GLV+ G  Y+ +M E Y ++P  EH+ C++D+LGRSGKL EA E +  + +QP
Sbjct: 527 -----HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 581

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
              VW A+L+AC  HG+ ++G++ A  LF+LEP+N   Y+ LSN+Y A G+W++A +  +
Sbjct: 582 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 641



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 168/671 (25%), Positives = 299/671 (44%), Gaps = 73/671 (10%)

Query: 104 MIADSSLC--NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLY 161
           ++ D   C  N  +  YA  G LN +   F        ++W++++SG        + L  
Sbjct: 66  VMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALEL 125

Query: 162 FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY 221
           F EM + GE+ +  +  S +   +    L  GK IHA  IK  ++ + +  V   L+ MY
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAF--VVTGLVDMY 183

Query: 222 SQCGDIEAAERAF-WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           ++C  I  AE  F      ++ V W A++ G++ NG   +A +   +M+    +E +  T
Sbjct: 184 AKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR-GEGIECNQFT 242

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
             ++++ C        G  VHG  +R   G ++ + ++L+D YSK   LS A  +   + 
Sbjct: 243 FPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM- 301

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
            ++D VSWNSMI G            LF+ M     +    T  ++L   +    +    
Sbjct: 302 EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAM 361

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           S+H   +K GF    +  NAL+ MY   G    AF + ++++ + D   W  ++  C  N
Sbjct: 362 SVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCVHN 420

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G ++EA++ F  M +     PD + +  V+SAC  L +   GK +H   LKS +G    V
Sbjct: 421 GSYEEALRLFCEM-RIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSV 479

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPN 568
            N+L++MY +C  I+ A+ VF+S    ++ TW  +I  ++QN                  
Sbjct: 480 DNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG----------------- 522

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMIS 628
                         G++ HG+          FQ       ++ ++Y        ++ MI 
Sbjct: 523 --------RGRDHAGLVEHGRSY--------FQ-------SMEEVYGIKPGPEHYACMID 559

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
             G  GK  EA EL ++M    ++P  +   +LL+AC   G V+ G +  NN+ E   + 
Sbjct: 560 LLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVELGERAANNLFE---LE 613

Query: 689 PETE-HHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPGVWGAMLSACSHH--GDTKMG 742
           P+    +V + ++   +GK +EA +    +K   +  +PG     +S+  H    + +  
Sbjct: 614 PKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSH 673

Query: 743 KQVAELLFKLE 753
            + AE+  K++
Sbjct: 674 PRTAEIYSKVD 684



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 222/502 (44%), Gaps = 25/502 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++ AY+N      +  LFYET  +  +TW+++I+      C V  L  F EM  EG R 
Sbjct: 77  TMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERP 136

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T   ++   +    L++G+ +H  +IK    +++ +    V+MYAKC  +  +E  F
Sbjct: 137 NQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF 196

Query: 132 S-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
                  + V W  +++G   N    K +  FR+M   G + +  +  S + A   +   
Sbjct: 197 ELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISAC 256

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            +G  +H   ++ G+     V V ++L+ MYS+CGD+  A R    M   D VSWN++I 
Sbjct: 257 GFGAQVHGCIVRSGF--GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIV 314

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G    G  EEA  L   M L R ++ D  T  ++++  +  + +R   SVH   ++    
Sbjct: 315 GCVRQGLGEEALSLFRIMHL-RHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFE 373

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
              L+ N+L+D Y+K      A  +F  +    D++SW S+++G            LF E
Sbjct: 374 AYKLVNNALVDMYAKRGYFDYAFDVFEKMTD-KDVISWTSLVTGCVHNGSYEEALRLFCE 432

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M  +        + A+L +C     LEFGK +H   LK G  ++    N+L+ MY  CG 
Sbjct: 433 MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGC 492

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-------FQEAIKTFKSMTQQQNASPDS 471
           +  A  +   +    D   W  +IV   QNG         +     F+SM +     P  
Sbjct: 493 IEDANKVFDSME-IQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGP 551

Query: 472 VTLVNVISACGNLELAFEGKSL 493
                +I   G      E K L
Sbjct: 552 EHYACMIDLLGRSGKLMEAKEL 573



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 149/306 (48%), Gaps = 9/306 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A++   ++L+  YS      ++  +       D V+WN+MI  CV        L  F
Sbjct: 270 GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLF 329

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    ++ D  T   +++  + +  ++    VH L +K G  A   + N  V+MYAK 
Sbjct: 330 RIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKR 389

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  + +   F  M   D +SW ++++GC+HN   E+ L  F EM   G   D + +++ +
Sbjct: 390 GYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVL 449

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  L +GK +HA  +K G   S  +SV NSL+SMY++CG IE A + F  M  +D
Sbjct: 450 SACAELTVLEFGKQVHANFLKSGLGSS--LSVDNSLVSMYAKCGCIEDANKVFDSMEIQD 507

Query: 242 VVSWNAIIDGFALNGK-------FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
           V++W A+I G+A NG+        E        M+ +  ++P       +I L   S  L
Sbjct: 508 VITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKL 567

Query: 295 REGRSV 300
            E + +
Sbjct: 568 MEAKEL 573



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 19/288 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A+   + +L+  Y+   YF+ +  +F +  +KDV++W +++T CV N      L  F
Sbjct: 371 GFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLF 430

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   GI  D   +  ++SA  ++  L+ G+ VH   +K+G+ +  S+ N  V+MYAKC
Sbjct: 431 CEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC 490

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP-------EKCLLYFREMGWSGEQADN 174
           G +  +   F  M   D ++W  ++ G   N          E    YF+ M       + 
Sbjct: 491 GCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSM------EEV 544

Query: 175 VSLSSAVAASACLGEL--SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
             +       AC+ +L    GK++ A  +       P  +V  +L++     G++E  ER
Sbjct: 545 YGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGER 604

Query: 233 A---FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEP 276
           A    + +  K+ V +  + + ++  GK+EEA      M+L   S EP
Sbjct: 605 AANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEP 652


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/446 (34%), Positives = 256/446 (57%), Gaps = 21/446 (4%)

Query: 355 LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           LF EML + S      T+   L SC+   +L+ G+ I  + +K G   +   +++L+HMY
Sbjct: 105 LFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMY 164

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            +C D+ AA  L   +  N     WN +I A  +NG++ E ++ FK M +   A  D +T
Sbjct: 165 ASCRDVAAAQLLFDAVEENG-VVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAF-DEIT 222

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           LV+V++ACG +  A  GK +     +  +  +  +  ALI MY +C ++  A  +F+   
Sbjct: 223 LVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQ 282

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
           + ++  W+ MIS ++Q      AL LF  +   E EPN++++VS+LSAC  LG L  GK 
Sbjct: 283 SRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKW 342

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H ++          + +AL+D Y+ C               K++  W+++I     +G+
Sbjct: 343 VHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGR 402

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G EA+ELF  M  + I PT  + I +L ACSHS LV+EG +++++M ++Y ++P  EH+ 
Sbjct: 403 GREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYG 462

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR+G + EAY+FI+ +PI+P   +W A+LS+C+ H + ++G++  + +  L P 
Sbjct: 463 CVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPS 522

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
           + G YI LSN+Y ++G+WK+A  I K
Sbjct: 523 HSGDYILLSNIYASVGQWKNAAMIRK 548



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 179/362 (49%), Gaps = 20/362 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG +A     +SL+  Y++     ++  LF       VV WNA+ITA ++N   +  +  
Sbjct: 148 RGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEM 207

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+E G+ FD  TL+ +V+A  ++   K G+ V     + G++ + +L    ++MYAK
Sbjct: 208 FKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAK 267

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L  +   F GM   D V+W+ ++SG    +   + L  F EM  +  + ++V++ S 
Sbjct: 268 CGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSV 327

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVT----NSLISMYSQCGDIEAAERAFWG 236
           ++A A LG L  GK +H+      Y     +S+T     +L+  Y++CG I+ A  AF  
Sbjct: 328 LSACAVLGALETGKWVHS------YIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFES 381

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  K+  +W A+I G A NG+  EA +L   M+   S+EP   T + ++  C+ S L+ E
Sbjct: 382 MPVKNSWTWTALIKGMATNGRGREALELFSSMR-KASIEPTDVTFIGVLMACSHSCLVEE 440

Query: 297 GRS-----VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           GR         Y I+    +       ++D   ++  + +A      +    + V W ++
Sbjct: 441 GRRHFDSMTQDYGIKPRAEH----YGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRAL 496

Query: 352 IS 353
           +S
Sbjct: 497 LS 498



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 209/444 (47%), Gaps = 23/444 (5%)

Query: 57  GLHFFGEMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
            LH F EM++   +  D  T+   + + ++M  L  GR +   ++K G++AD  + +  +
Sbjct: 102 ALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLI 161

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           +MYA C D+ +++  F  +     V WN I++  + N    + +  F+ M   G   D +
Sbjct: 162 HMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEI 221

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L S V A   +G+   GK +     + G   +   ++  +LI MY++CG++  A R F 
Sbjct: 222 TLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN--RNLMTALIDMYAKCGELGKARRLFD 279

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           GM  +DVV+W+A+I G+    +  EA  L  EMQL   VEP+  T+V+++S CA    L 
Sbjct: 280 GMQSRDVVAWSAMISGYTQADQCREALALFSEMQLA-EVEPNDVTMVSVLSACAVLGALE 338

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ VH Y  R+ L   +++  +L+DFY+K   +  A   F ++ P+ +  +W ++I G 
Sbjct: 339 TGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKGM 397

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNN 402
                      LF  M     + +  T + +L +C+    +E G+          G    
Sbjct: 398 ATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPR 457

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF---QEAIKTFK 459
                 ++ +    G +  A+  ++ +    +   W  ++ +C  + +    +EA+K   
Sbjct: 458 AEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIV 517

Query: 460 SMTQQQNASPDSVTLVNVISACGN 483
           S+      S D + L N+ ++ G 
Sbjct: 518 SLNPSH--SGDYILLSNIYASVGQ 539



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 154/614 (25%), Positives = 255/614 (41%), Gaps = 90/614 (14%)

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           T  +N +M   LH  +PE  L  F EM   +    D  +++ A+ + + +  L  G+ I 
Sbjct: 83  TPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQ 142

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  +K G     +  V +SLI MY+ C D+ AA+  F  +    VV WNAII  +  NG 
Sbjct: 143 AYAVKRGLMADRF--VLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGN 200

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
           + E  ++   M L   V  D  T+V++++ C      + G+ V  Y   + L  +  +M 
Sbjct: 201 WMEVVEMFKGM-LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMT 259

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           +L+D Y+K   L KA  LF+ +    D+V+W++MISG            LF EM     +
Sbjct: 260 ALIDMYAKCGELGKARRLFDGMQS-RDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAA 422
            +  T++++L +C    +LE GK +H +  +   S   I   AL+  Y  CG   D V A
Sbjct: 319 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEA 378

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           F  +     NS T  W  +I     NG  +EA++ F SM ++ +  P  VT + V+ AC 
Sbjct: 379 FESMP--VKNSWT--WTALIKGMATNGRGREALELFSSM-RKASIEPTDVTFIGVLMACS 433

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +  L  EG+  H  ++    G+  R ++     YG   D+   + + +  Y         
Sbjct: 434 HSCLVEEGRR-HFDSMTQDYGIKPRAEH-----YGCVVDLLGRAGLIDEAY--------- 478

Query: 543 MISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
                          +  R +  EPN +   ++LS+C     +  G++    +  L    
Sbjct: 479 ---------------QFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSL---- 519

Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK------- 655
                        N   +  +  + + Y   G+   A  +  EM + GI  T        
Sbjct: 520 -------------NPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIEL 566

Query: 656 -SSVISLLSACSHSGLVDEGLQYYNNMLEEY----------DVRPETEHHVCIVDMLGRS 704
              V+   +  S    + E  Q    M++            DVR E + H   V +   S
Sbjct: 567 DGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHS 626

Query: 705 GKLQEAYEFIKNLP 718
            KL  A+  +K  P
Sbjct: 627 EKLAIAFGLMKLDP 640



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 173/348 (49%), Gaps = 28/348 (8%)

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
           T C+N+++ A    GH ++A+  F  M    +  PD  T+   + +C  +     G+ + 
Sbjct: 83  TPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQ 142

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
             A+K  +  D  V ++LI MY  CRD+ +A  +F++     +  WN +I+A+ +N   +
Sbjct: 143 AYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWM 202

Query: 555 RALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
             +E+F+    +    +EI++VS+++AC ++G  + GK +  +V   G   N  + +AL+
Sbjct: 203 EVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALI 262

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C               +   AWS+MIS Y    +  EA+ LF EM  + + P   
Sbjct: 263 DMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDV 322

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +++S+LSAC+  G ++ G ++ ++ +    +         +VD   + G + +A E  ++
Sbjct: 323 TMVSVLSACAVLGALETG-KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFES 381

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL-----FKLEPENVGY 759
           +P++     W A++   + +G    G++  EL        +EP +V +
Sbjct: 382 MPVK-NSWTWTALIKGMATNG---RGREALELFSSMRKASIEPTDVTF 425


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 185/638 (28%), Positives = 312/638 (48%), Gaps = 82/638 (12%)

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM------ 271
           +++YS+C     A +     +  D+VSW+A+I G+  NG+ EEA    +EM L+      
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 272 -------------RSVE--------------------PDIATVVTLISLCADSLLLREGR 298
                        R++E                    P+  ++ T+++ CA       G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 299 SVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
            VHGY I+  LGYD      N+L+D Y+KS     A  +F  I P  D+VSWN++I+G  
Sbjct: 209 KVHGYLIK--LGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI-PKPDIVSWNAVIAGCV 265

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     L  +M       S  TL + L +C +   ++ G+ +H   +K+    ++ 
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325

Query: 405 GVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
               L+ MY  CG   D    F L+       D   WN +I   +  G+  EA+  F +M
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMP----XKDVIVWNSIISGYSNCGYDIEAMSLFTNM 381

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
             ++    +  TL  ++ +    +     + +H +++KS    D  V N+L+  YG+C  
Sbjct: 382 -YKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCL 440

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
           ++ A+ VFE C   +L  +  MI+A+SQ      AL+++  ++    +P+     S+ +A
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C  L     GKQIH HV   G   + F  ++L++MY+ C               +   +W
Sbjct: 501 CANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSW 560

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           S+MI     HG G +A++LF++M  +GI P   +++S+LSAC+H+GLV E  +++  M +
Sbjct: 561 SAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEK 620

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
            + + P  EH+ C+VD+LGR G+L EA   +K +P Q    VWGA+L A   H + ++G+
Sbjct: 621 LFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGR 680

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             AE+L  LEPE  G +I L+N+Y + G W +  ++ +
Sbjct: 681 HAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRR 718



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 268/587 (45%), Gaps = 76/587 (12%)

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQ 171
           VN+Y+KC     +          D VSW+ ++SG + N   E+ LL + EM   G  G +
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 172 -------------------------------------ADNVSLSSAVAASACLGELSYGK 194
                                                 +  SLS+ + A A L + +YG 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
            +H   IKLGY+  P+ +  N+L+ MY++ G  EAA   F+ +   D+VSWNA+I G  L
Sbjct: 209 KVHGYLIKLGYDSDPFSA--NALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
           + K + A  LL +M   R V P + T+ + +  CA   L++ GR +H   ++  +  D  
Sbjct: 267 HEKNDLALKLLGKMGSYR-VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           +   L+D YSK   L  A ++F+ + P  D++ WNS+ISG            LF  M   
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFD-LMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE 384

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +F+ +TL  IL S    ++  F + +H   +K G+  +    N+L+  Y  C  L  A
Sbjct: 385 GLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDA 444

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             + + +    D   +  +I A +Q G  +EA+K +  M Q ++  PD+    ++ +AC 
Sbjct: 445 AKVFE-VCPAEDLVAYTSMITAYSQYGLGEEALKMYLRM-QDRDIKPDAFIFSSLFNACA 502

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           NL    +GK +H   LK  +  D    N+L+ MY +C  I  AS +F       + +W+ 
Sbjct: 503 NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSA 562

Query: 543 MISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           MI   +Q+    +AL+LF  +      PN I++VS+LSAC   G++   ++  G      
Sbjct: 563 MIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFG------ 616

Query: 600 FQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
                     +  ++    +   ++ M+   G  G+  EA+ L  EM
Sbjct: 617 ---------LMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM 654



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 277/591 (46%), Gaps = 46/591 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYET----CNKDVVTWNAMITACVENRCVVMG-----LHFF 61
           ++L++ Y      E +L  +YE        +  T+++++  C   R + +G     +   
Sbjct: 117 SALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALV 176

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+  GI  +  +L  +++A   +     G  VH   IK G  +D    N  ++MYAK 
Sbjct: 177 TEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKS 236

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G   ++   F  +   D VSWN +++GC+ +   +  L    +MG         +LSSA+
Sbjct: 237 GCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSAL 296

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +G +  G+ +H+  +K+  E   +V V   LI MYS+CG ++ A   F  M  KD
Sbjct: 297 KACAAIGLVKLGRQLHSALMKMDMEPDSFVGV--GLIDMYSKCGLLQDARMVFDLMPXKD 354

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+ WN+II G++  G   EA  L   M     +E +  T+ T++   A S        VH
Sbjct: 355 VIVWNSIISGYSNCGYDIEAMSLFTNM-YKEGLEFNQTTLSTILKSTAGSQANGFCEQVH 413

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
             +I+    YD  + NSL+D Y K   L  A  +F  + P  DLV++ SMI+     GL 
Sbjct: 414 TISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFE-VCPAEDLVAYTSMITAYSQYGLG 472

Query: 357 KEML--YLCSQ--------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           +E L  YL  Q        F FS+L     +C +  + E GK IH   LK G  ++    
Sbjct: 473 EEALKMYLRMQDRDIKPDAFIFSSLFN---ACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           N+L++MY  CG +  A  +   IS     S W+ +I    Q+GH ++A++ F  M  +  
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIGGLAQHGHGRKALQLFYQML-KNG 587

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKS 524
             P+ +TLV+V+SAC +  L  E +   GL ++ L G+    ++   ++ + GR   +  
Sbjct: 588 ILPNHITLVSVLSACNHAGLVTEARRFFGL-MEKLFGITPTQEHYACMVDILGRVGRLDE 646

Query: 525 AST-VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH-----LEFEPNE 569
           A   V E  +  +   W  ++ A   +K     +EL RH     L  EP +
Sbjct: 647 AMVLVKEMPFQASAAVWGALLGAARIHK----NIELGRHAAEMLLTLEPEK 693



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 231/488 (47%), Gaps = 18/488 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           ++ +LL  Y+     E+++A+FYE    D+V+WNA+I  CV +    + L   G+M    
Sbjct: 225 SANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYR 284

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +     TL   + A   +  +K GR +H   +K  M  DS +    ++MY+KCG L  + 
Sbjct: 285 VAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDAR 344

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D + WN+I+SG  +  Y  + +  F  M   G + +  +LS+ + ++A   
Sbjct: 345 MVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQ 404

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
              + + +H + IK GY+   YV+  NSL+  Y +C  +E A + F     +D+V++ ++
Sbjct: 405 ANGFCEQVHTISIKSGYQYDGYVA--NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSM 462

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  ++  G  EEA  +   MQ  R ++PD     +L + CA+     +G+ +H + ++  
Sbjct: 463 ITAYSQYGLGEEALKMYLRMQ-DRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCG 521

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+   NSL++ Y+K  S+  A  +FN I+    +VSW++MI G            LF
Sbjct: 522 LLSDVFAGNSLVNMYAKCGSIDDASCIFNEIS-WRGIVSWSAMIGGLAQHGHGRKALQLF 580

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYIN 415
            +ML      +  TL+++L +CN    +   +       KL G +        ++ +   
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQNASPDSVTL 474
            G L  A  L++ +   +  + W  ++ A   + + +      +  +T +   S   + L
Sbjct: 641 VGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILL 700

Query: 475 VNVISACG 482
            N+ ++ G
Sbjct: 701 ANIYASTG 708



 Score = 39.3 bits (90), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 64/155 (41%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ +    SL+  Y+     + +  +F E   + +V+W+AMI    ++      L  F
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAK 120
            +M++ GI  +  TL+ ++SA      + + R    L  K  G+          V++  +
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            G L+ +      M   A    W  ++    +H N
Sbjct: 641 VGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKN 675


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 219/826 (26%), Positives = 377/826 (45%), Gaps = 85/826 (10%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    L  S  L+ +Y+  +   ++  +F E   ++ V+W  +++  V           
Sbjct: 89  RGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRV 148

Query: 61  FGEM---VEEGIRFDSTTLLIIVSALTQMNCLKQGRV--VHCLSIKAGMIADSSLCNVFV 115
           F  M   VE G R  S T   ++ A       + G    VH L  K    +++++CN  +
Sbjct: 149 FRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALI 208

Query: 116 NMYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           +MY  C  G    ++  F G    D ++WN +MS              F +M     +  
Sbjct: 209 SMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQ---REDS 265

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYE---DSPYVSVTNS-----------LIS 219
            + L           E ++G +I A  +  G     D  +VSV  S           L+S
Sbjct: 266 RIQLRPT--------EHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVS 317

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
            +++ G I+ A+  F  +  K+ V+ N +I G       EEA  +    +    V  D  
Sbjct: 318 AFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNAD-- 375

Query: 280 TVVTLISLCADSLL----LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           T V L+S  A+  +    LR+G+  HG+ +R  L    + + N L++ Y+K  ++  A  
Sbjct: 376 TYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASK 435

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +F  +    D +SWN++IS L +  L L S                      G+ +HC  
Sbjct: 436 IFQ-LMEATDRISWNTIISALDQNGLKLLSA---------------------GQQVHCDA 473

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +K G   +T   N L+ MY  CG +   + +   ++ + + S  +++ V  +      E 
Sbjct: 474 VKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISET 533

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           ++ F +M  +    P+ VT VN+++A   L +   GK  H   LK  +  D  V NALI+
Sbjct: 534 VEVFNNM-MRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALIS 592

Query: 515 MYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQNKAEVRALE---LFRHLEFEPNEI 570
            Y +  D+ S   +F +     +  +WN MIS +  N     A++   L  H     +  
Sbjct: 593 CYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCC 652

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +   IL+AC  +  L  G ++H        + +  + SAL+DMYS C             
Sbjct: 653 TFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 712

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             ++  +W+SMIS Y  HG G +A+E F EM  S   P   + +S+LSACSH+GLV+ GL
Sbjct: 713 TQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGL 772

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           +Y+  M+ ++ + P+ EH+ C++D+LGR+GK+ +  E+I+ +P++P   +W  +L AC  
Sbjct: 773 EYF-EMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVLVACRQ 831

Query: 736 HGD---TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
             D    ++G++   +L ++EP+N   Y+  SN + A G W+D  +
Sbjct: 832 SKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMWEDTAK 877



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 182/725 (25%), Positives = 316/725 (43%), Gaps = 101/725 (13%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   IK G+  D  L N  VN YAK   L ++   F  M   + VSW  ++SG +    
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 155 PEKCLLYFREMGWSGEQA-DNVSLSSAVAASACL----GELSYGKVIHALGIKLGYEDSP 209
            E+    FR M    E      S +      AC       L +   +H L  K  Y  + 
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASN- 200

Query: 210 YVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +V N+LISMY  C  G    A+R F G   +D+++WNA++  +A  G     F L  +
Sbjct: 201 -TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMD 259

Query: 268 MQL------MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
           MQ       +R  E    +++T  SL + S  + +   V    ++     DL + ++L+ 
Sbjct: 260 MQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLD--QVFVSVLKSGCSSDLYVGSALVS 317

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM--------------LYLCSQFS 367
            +++   + +A+ +F ++   N  V+ N +I GL K+                 + +  +
Sbjct: 318 AFARHGLIDEAKDIFLSLKEKN-AVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVNADT 376

Query: 368 FSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSL 425
           +  LL+ +   + PE  L  GK  H   L+ G ++  I V N L++MY  CG + +A  +
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            Q +   +D   WN +I A  QNG                                  L+
Sbjct: 437 FQ-LMEATDRISWNTIISALDQNG----------------------------------LK 461

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           L   G+ +H  A+K  + LDT V N L+ MYG C  +     VF S  + +  +WN M+ 
Sbjct: 462 LLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMG 521

Query: 546 AFSQNKAEV-RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
             + ++A +   +E+F ++      PN+++ V++L+A + L VL  GKQ H  V   G  
Sbjct: 522 VMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVM 581

Query: 602 ENSFISSALLDMY----------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
           +++ + +AL+  Y                S  +   +W+SMIS Y Y+G   EA++    
Sbjct: 582 DDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWL 641

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDML 701
           M +SG      +   +L+AC+    ++ G++     +  + +R   E  V +    VDM 
Sbjct: 642 MLHSGQIMDCCTFSIILNACASVAALERGME-----MHAFGIRSHLESDVVVESALVDMY 696

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE--PENVGY 759
            + G++  A +   ++  Q     W +M+S  + HG  +   +  E + +    P++V +
Sbjct: 697 SKCGRVDYASKLFNSM-TQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTF 755

Query: 760 YISLS 764
              LS
Sbjct: 756 VSVLS 760



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 169/404 (41%), Gaps = 73/404 (18%)

Query: 292 LLLREG------RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           LL R G       ++H   I+R L +DL + N L++ Y+K   L+ A  +F+ + P  + 
Sbjct: 68  LLRRRGDAANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEM-PQRNA 126

Query: 346 VSWNSMISG------------LFKEMLYLC------SQFSFSTLLAILPSCNS--PESLE 385
           VSW  ++SG            +F+ ML         + F+F TLL    +C    P+ L 
Sbjct: 127 VSWTCLLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLR---ACQDGGPDRLG 183

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS---DTSCWNIVI 442
           F   +H    K  +++NT   NAL+ MY +C   V    L QR+   +   D   WN ++
Sbjct: 184 FATQVHGLLSKTEYASNTTVCNALISMYGSC--TVGPPILAQRVFDGTPIRDLITWNALM 241

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNA---SPDSVTLVNVISAC-------GNLELAFEGKS 492
               + G        F  M ++ +     P   T  ++I+A          L+  F    
Sbjct: 242 SVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVS-- 299

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
                LKS    D  V +AL++ + R   I  A  +F S    N  T N +I    +   
Sbjct: 300 ----VLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHC 355

Query: 553 EVRALELFRHLE--FEPNEISIVSILSACTQLGV----LRHGKQIHGHVFHLGFQENSF- 605
              A+++F         N  + V +LSA  +  +    LR GK+ HGH+   G  +    
Sbjct: 356 SEEAVKIFVGTRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIA 415

Query: 606 ISSALLDMYSNCKS---------------NAAWSSMISAYGYHG 634
           +S+ L++MY+ C +                 +W+++ISA   +G
Sbjct: 416 VSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQNG 459



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           ++LH   +K  +  D  + N L+  Y +   + +AS VF+     N  +W C++S +   
Sbjct: 80  ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139

Query: 551 KAEVRALELFRHLEFE------PNEISIVSILSACTQLGVLRHG--KQIHGHVFHLGFQE 602
                A  +FR +  E      P   +  ++L AC   G  R G   Q+HG +    +  
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199

Query: 603 NSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           N+ + +AL+ MY +C                 +    W++++S Y   G       LF +
Sbjct: 200 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMD 259

Query: 646 MCNSG----IRPTKSSVISLLSACSHS 668
           M        +RPT+ +  SL++A S S
Sbjct: 260 MQREDSRIQLRPTEHTFGSLITATSLS 286


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 180/639 (28%), Positives = 313/639 (48%), Gaps = 46/639 (7%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SWN  ++    N +  + L  FR M   G   D VS  + + A A LG+LS G+  H   
Sbjct: 8   SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            +     S  V V  ++++MY++CG +  A RAF  M  ++VVSW+A+I  +A  G   +
Sbjct: 68  CEASGLGSDVV-VATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGD 126

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSL 319
           A +L   M     V+ +  T V+++  CA    +  G+S+H   +   LLG D+++ N++
Sbjct: 127 ALELFVRMD-HEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTI 185

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQFSFS----- 369
           ++ Y K   +  A  +F  +   N  V+WN+MI+       +KE   L  +         
Sbjct: 186 VNMYGKCGEVDLAREVFERMEAKN-AVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPN 244

Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             TL++++ +C   +S+  G+ +H      G  ++    NAL+++Y  CG L AA   L+
Sbjct: 245 KITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALE 304

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            I    D   W  ++ A  ++GH + AI   K M   +    DS T VN++ +C  +   
Sbjct: 305 GI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRM-DHEGVKLDSFTFVNLLESCVAIAAL 362

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISA 546
             G+ +H    +S + LD  +Q AL+ MYG+C +  +A   F+   +  ++  WN +++A
Sbjct: 363 ALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAA 422

Query: 547 FSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +         L +F  +  +   P+ ++ +SIL AC  L  L  G+  H  +   G  + 
Sbjct: 423 YVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDR 482

Query: 604 SFISSA------LLDMYSNCKSNA------------------AWSSMISAYGYHGKGWEA 639
             ++SA      +++MY+ C S A                  AWS+M++AY   G   EA
Sbjct: 483 QAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEA 542

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +  F+ M   G++P   S +S ++ CSHSGLV E + ++ ++  ++ + P   H  C+VD
Sbjct: 543 LRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVD 602

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           +L R+G ++EA   ++  P+      W  +LSAC  +GD
Sbjct: 603 LLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGD 641



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 147/577 (25%), Positives = 262/577 (45%), Gaps = 29/577 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++   +WN  I     N      L  F  M  EG+  D  + + I+ A   +  L QG  
Sbjct: 3   DRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEF 62

Query: 95  VHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            H    +A G+ +D  +    + MY +CG ++ +   F  M   + VSW+ +++      
Sbjct: 63  FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRG 122

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           +P   L  F  M   G +A+ ++  S + A A +  ++ GK IH   +  G      + +
Sbjct: 123 HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI-L 181

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N++++MY +CG+++ A   F  M  K+ V+WN +I   + + +++EAF LL EM L   
Sbjct: 182 GNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDL-DG 240

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           + P+  T+V++I  CA    +  GR VH       L  D  + N+L++ Y K   L  A 
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300

Query: 334 LLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSP 381
                I    D +SW ++++             + K M +   +    T + +L SC + 
Sbjct: 301 HALEGI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAI 359

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +L  G+ IH    + G   + +   AL+ MY  CG+  AA     R+S   D + WN +
Sbjct: 360 AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNAL 419

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH------G 495
           + A       +E +  F  M+  Q  +PD+VT ++++ AC +L     G+  H      G
Sbjct: 420 LAAYVLRDQGKETLGIFARMS-LQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERG 478

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC---NLCTWNCMISAFSQNKA 552
           L  +  +     +  ++I MY +C  +  A   F         ++  W+ M++A+SQ   
Sbjct: 479 LFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGL 538

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
              AL  F  ++ E   P+ +S VS ++ C+  G++R
Sbjct: 539 SEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVR 575



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 252/526 (47%), Gaps = 36/526 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  +T++LT Y+       +   F     ++VV+W+AMI A  +       L  F
Sbjct: 72  GLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELF 131

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAK 120
             M  EG++ ++ T + ++ A   M  +  G+ +H   +  G++ D   L N  VNMY K
Sbjct: 132 VRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGK 191

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGC-LHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG+++ +   F  M   + V+WNT+++ C  H+ Y E   L   EM   G + + ++L S
Sbjct: 192 CGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFAL-LGEMDLDGLRPNKITLVS 250

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A +  +  G+++H +    G E     +V N+L+++Y +CG + AA  A  G+  
Sbjct: 251 VIDACAWMQSIVRGRIVHEIVAGEGLESDN--TVANALVNLYGKCGKLRAARHALEGIET 308

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D +SW  ++  +A +G  + A  ++  M     V+ D  T V L+  C     L  G  
Sbjct: 309 RDKISWTTLLAAYARHGHGKRAIAVIKRMD-HEGVKLDSFTFVNLLESCVAIAALALGEE 367

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF--- 356
           +H       +  D ++  +L+D Y K  +   A   F+ ++ + D+  WN++++      
Sbjct: 368 IHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRD 427

Query: 357 --KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIG- 405
             KE L + ++ S         T L+IL +C S  +L  G+  H   L+ G F    +  
Sbjct: 428 QGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVAS 487

Query: 406 ----VNALMHMYINCGDLV---AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
                 ++++MY  CG L    A F+  +R +  SD   W+ ++ A +Q G  +EA++ F
Sbjct: 488 ADLLTTSVINMYAKCGSLADAKAEFAKARR-ARASDVVAWSAMVAAYSQFGLSEEALRCF 546

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-------HGLA 497
            SM QQ+   PDSV+ V+ I+ C +  L  E  +        HG+A
Sbjct: 547 YSM-QQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIA 591



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 265/561 (47%), Gaps = 47/561 (8%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +   SWN  I  +A NG    A ++   M L   V PD  + + ++   A    L +
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMAL-EGVAPDRVSCIAILDAFASLGDLSQ 59

Query: 297 GRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           G   H        LG D+++  +++  Y++  S+S A   F+A+   N +VSW++MI+  
Sbjct: 60  GEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRN-VVSWSAMIAAY 118

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNN 402
                      LF  M +   + +  T +++L +C S  ++  GKSIH   +  G   ++
Sbjct: 119 AQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDD 178

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            I  N +++MY  CG++  A  + +R+   +  + WN +I AC+++  ++EA      M 
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVFERMEAKNAVT-WNTMIAACSRHDRYKEAFALLGEM- 236

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
                 P+ +TLV+VI AC  ++    G+ +H +     +  D  V NAL+ +YG+C  +
Sbjct: 237 DLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKL 296

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSAC 579
           ++A    E     +  +W  +++A++++    RA+ + + ++ E    +  + V++L +C
Sbjct: 297 RAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESC 356

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA----------------W 623
             +  L  G++IH  +   G + +  + +AL+DMY  C +  A                W
Sbjct: 357 VAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVW 416

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +++++AY    +G E + +F  M   G+ P   + +S+L AC+    +  G   ++ MLE
Sbjct: 417 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLE 476

Query: 684 E--YDVRPETEHHV---CIVDMLGRSGKLQEAY-EFIKNLPIQPKPGV-WGAMLSACSHH 736
              +D +      +    +++M  + G L +A  EF K    +    V W AM++A S  
Sbjct: 477 RGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQF 536

Query: 737 GDTKMGKQVAELLFKLEPENV 757
           G   + ++     + ++ E V
Sbjct: 537 G---LSEEALRCFYSMQQEGV 554



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 219/467 (46%), Gaps = 33/467 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++  Y      + +  +F     K+ VTWN MI AC  +          GEM  +G+R 
Sbjct: 184 TIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRP 243

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TL+ ++ A   M  + +GR+VH +    G+ +D+++ N  VN+Y KCG L ++    
Sbjct: 244 NKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHAL 303

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+   D +SW T+++    + + ++ +   + M   G + D+ +  + + +   +  L+
Sbjct: 304 EGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALA 363

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIID 250
            G+ IH    + G E  P +    +L+ MY +CG+ +AA RAF  M+  +DV  WNA++ 
Sbjct: 364 LGEEIHDRLAESGIELDPVLQ--TALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLA 421

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            + L  + +E   +   M L + V PD  T ++++  CA    L  GR  H   + R L 
Sbjct: 422 AYVLRDQGKETLGIFARMSL-QGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL- 479

Query: 311 YDL-------LMMNSLMDFYSKSNSL--SKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           +D        L+  S+++ Y+K  SL  +KAE      A  +D+V+W++M++     GL 
Sbjct: 480 FDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLS 539

Query: 357 KEML---YLCSQFSFS----TLLAILPSCNSP----ESLEFGKSIHCWQLKLGFSNNTIG 405
           +E L   Y   Q        + ++ +  C+      E++ F  S+   +   G +     
Sbjct: 540 EEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSL---RHDHGIAPTEAH 596

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              L+ +    G +  A +L++R    +  S W  ++ AC   G  +
Sbjct: 597 FACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLE 643


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 196/665 (29%), Positives = 323/665 (48%), Gaps = 55/665 (8%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M    +Q D+ +L  A+ ++A L +    + IHA  ++ G    P  +V N+L++ Y++C
Sbjct: 50  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 109

Query: 225 GDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           G + AA   F  ++    D VS+N++I    L  ++    D                T  
Sbjct: 110 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW----DHALAALRAMLAGGHPLTSF 165

Query: 283 TLIS-------LCADSLLLREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAE 333
           TL+S       L A +  +R GR  H +A++   L G+     N+L+  Y++   ++ A+
Sbjct: 166 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 225

Query: 334 LLFNAIAP-MNDLVSWNSMIS-----GLFKE-------MLYLCSQFSFSTLLAILPSCNS 380
            LF    P   D+V+WN+M+S     G+F E       M+ L  +    T  + LP+C+ 
Sbjct: 226 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 285

Query: 381 PESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCW 438
            E L+ G+ +H + +K    + N+   +AL+ MY     +  A  +   +  +      W
Sbjct: 286 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 345

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLA 497
           N +I    Q G  +EA++ F  M  +    P   T+ +V+ AC   E AF GK ++HG  
Sbjct: 346 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE-AFAGKEAVHGYV 404

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K  M  +  VQNAL+ MY R      A  +F      ++ +WN +I+          A 
Sbjct: 405 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 464

Query: 558 ELFRHLE------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           +L R ++        PN I+++++L  C  L     GK+IHG+        +  + SAL+
Sbjct: 465 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 524

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTK 655
           DMY+ C               ++   W+ +I AYG HG G EA  LF  M  SG  RP +
Sbjct: 525 DMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNE 584

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + ++ L+ACSHSG+VD GLQ ++ M  ++ V P  +   C+VD+LGR+G+L EAY  + 
Sbjct: 585 VTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVT 644

Query: 716 NLPI-QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           ++   + +   W  ML AC  H +  +G+   E L +LEPE   +Y+ L N+Y A G+W 
Sbjct: 645 SMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWT 704

Query: 775 DAVEI 779
            A E+
Sbjct: 705 RAAEV 709



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 228/509 (44%), Gaps = 35/509 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +LL+ Y+ +     +  LF        DVVTWN M++  V++      +    +MV  G+
Sbjct: 210 ALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV 269

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSSE 128
           R D  T    + A +++  L  GR +H   IK   + A+S + +  V+MYA    +  + 
Sbjct: 270 RPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKAR 329

Query: 129 CTF-----SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVA 182
             F     SG        WN ++ G       E+ L  F  M   +G      +++S + 
Sbjct: 330 QVFDMVPDSGKQLG---MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 386

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A     +  + +H   +K G   + +V   N+L+ MY++ G  + A R F  +   DV
Sbjct: 387 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQ--NALMDMYARLGKTDVARRIFAMVDLPDV 444

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSV 300
           VSWN +I G  + G   +AF L  EMQ +    V P+  T++TL+  CA       G+ +
Sbjct: 445 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 504

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL 355
           HGYA+R  L  D+ + ++L+D Y+K   L+ +  +F+ + P  + ++WN +I      GL
Sbjct: 505 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL-PRRNTITWNVLIMAYGMHGL 563

Query: 356 FKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGV 406
             E   L  + + S        T +A L +C+    ++ G  + H  +   G       +
Sbjct: 564 GGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL 623

Query: 407 NALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
             ++ +    G L  A++++  + +     S W+ ++ AC   +N H  E         +
Sbjct: 624 ACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELE 683

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKS 492
            + AS   V L N+ SA G    A E +S
Sbjct: 684 PEEAS-HYVLLCNIYSAAGQWTRAAEVRS 711



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +     +L+  Y+ +   + +  +F      DVV+WN +IT CV    V      
Sbjct: 407 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 466

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             EM    E G+  ++ TL+ ++     +    +G+ +H  +++  +  D ++ +  V+M
Sbjct: 467 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 526

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSGEQADN-V 175
           YAKCG L  S   F  +   +T++WN  IM+  +H    E  +L+ R M  SGE   N V
Sbjct: 527 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR-MTASGEARPNEV 585

Query: 176 SLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           +  +A+AA +  G +  G ++ HA+    G E +P   +   ++ +  + G ++ A
Sbjct: 586 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP--DILACVVDILGRAGRLDEA 639


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 290/564 (51%), Gaps = 50/564 (8%)

Query: 265 LHEMQLMRSVEPDIATVV------TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           L ++ ++ + EP + T +       L+  C D  L  E R +HG+ ++     DL +M  
Sbjct: 39  LIQLNVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTF 98

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++ YSK   +  A  +F+ + P  ++ +W ++++G            LF +ML   +  
Sbjct: 99  LVNVYSKCGVMESAHKVFDNL-PRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYP 157

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  TL  +L +C+S +S+EFGK +H + +K     +T   N+L   Y     L  A    
Sbjct: 158 SNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF 217

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
            +I    D   W  VI +C  NG    ++  F  M       P+  TL +V+SAC  +  
Sbjct: 218 -KIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSD-GMKPNEYTLTSVLSACCVMLT 275

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              G  +H L++K   G    ++N+++ +Y +C  +  A  +FE     NL TWN MI+ 
Sbjct: 276 LDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAG 335

Query: 547 FSQ-----------NKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
            ++           +K+   AL +F+ L     +P+  +  S+LS C+ L  L  G+QIH
Sbjct: 336 HAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIH 395

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
           G +   G   +  + +AL+ MY+ C               ++  +W+SMI+ +  HG   
Sbjct: 396 GQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQ 455

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +A++LF +M   GI+P + + + +LSACSH+GL DE L Y+  M ++Y+++P  +H  C+
Sbjct: 456 QALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACL 515

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           +DM  R G+++EA++ +  +  +P   +W  +++ C  HG + +G   AE L KL+P++V
Sbjct: 516 IDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDV 575

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
             Y+SL NM+++ GRWKD  ++ K
Sbjct: 576 ETYVSLLNMHISAGRWKDVSKVRK 599



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 235/474 (49%), Gaps = 32/474 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   T L+  YS     ES+  +F     ++V  W  ++T  V+N   ++ L  F
Sbjct: 88  GFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLF 147

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+E G    + TL I+++A + +  ++ G+ VH   IK  +  D+S+ N   + Y+K 
Sbjct: 148 IKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKF 207

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  +   D +SW +++S C  N    + L +F +M   G + +  +L+S +
Sbjct: 208 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 267

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A   +  L  G  IH+L IKLGY  S  + + NS++ +Y +CG +  A++ F GM   +
Sbjct: 268 SACCVMLTLDLGAQIHSLSIKLGYGSS--ILIKNSIMYLYLKCGWLIEAQKLFEGMETLN 325

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHE---------MQLMRS-VEPDIATVVTLISLCADS 291
           +V+WNA+I G A      E     H+          +L RS ++PD+ T  +++S+C++ 
Sbjct: 326 LVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNL 385

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + L +G  +HG  I+  +  D+++  +L+  Y+K  S+ KA   F  + P   ++SW SM
Sbjct: 386 VALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEM-PSRTMISWTSM 444

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKSIHCWQL 395
           I+G            LF++M  +  + +  T + +L +C+    + E+L +       Q 
Sbjct: 445 ITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY---FELMQK 501

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +            L+ MY+  G +  AF ++ +++   + + W+++I  C  +G
Sbjct: 502 QYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 555



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 256/545 (46%), Gaps = 49/545 (8%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G R +S+    ++      N   + R++H   +K G   D  +    VN+Y+KCG + S+
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   +  +W T+++G + N++P   L  F +M  +G    N +L   + A + L
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             + +GK +HA  IK  Y      S+ NSL S YS+   +E A +AF  +  KDV+SW +
Sbjct: 173 QSIEFGKQVHAYLIK--YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 230

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I     NG+   +     +M L   ++P+  T+ +++S C   L L  G  +H  +I+ 
Sbjct: 231 VISSCCDNGQAARSLSFFMDM-LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKL 289

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------- 359
             G  +L+ NS+M  Y K   L +A+ LF  +  +N LV+WN+MI+G  K M        
Sbjct: 290 GYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLN-LVTWNAMIAGHAKMMDLAEDDVA 348

Query: 360 --------------LYLCSQ----FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                         LY        F+FS++L++   C++  +LE G+ IH   +K G   
Sbjct: 349 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSV---CSNLVALEQGEQIHGQIIKSGVLA 405

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           + +   AL+ MY  CG +  A      +   +  S W  +I    ++G  Q+A++ F+ M
Sbjct: 406 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS-WTSMITGFARHGLSQQALQLFEDM 464

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITM 515
            +     P+ VT V V+SAC +  LA E      L    LM     ++        LI M
Sbjct: 465 -RLVGIKPNQVTFVGVLSACSHAGLADE-----ALYYFELMQKQYNIKPVMDHFACLIDM 518

Query: 516 YGRCRDIKSA-STVFESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEI-SI 572
           Y R   ++ A   V +  +  N   W+ +I+   S  K+++      + L+ +P ++ + 
Sbjct: 519 YLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETY 578

Query: 573 VSILS 577
           VS+L+
Sbjct: 579 VSLLN 583


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 196/665 (29%), Positives = 323/665 (48%), Gaps = 55/665 (8%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M    +Q D+ +L  A+ ++A L +    + IHA  ++ G    P  +V N+L++ Y++C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 225 GDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           G + AA   F  ++    D VS+N++I    L  ++    D                T  
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW----DHALAALRAMLAGGHPLTSF 163

Query: 283 TLIS-------LCADSLLLREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAE 333
           TL+S       L A +  +R GR  H +A++   L G+     N+L+  Y++   ++ A+
Sbjct: 164 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 223

Query: 334 LLFNAIAP-MNDLVSWNSMIS-----GLFKE-------MLYLCSQFSFSTLLAILPSCNS 380
            LF    P   D+V+WN+M+S     G+F E       M+ L  +    T  + LP+C+ 
Sbjct: 224 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 283

Query: 381 PESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCW 438
            E L+ G+ +H + +K    + N+   +AL+ MY     +  A  +   +  +      W
Sbjct: 284 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 343

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLA 497
           N +I    Q G  +EA++ F  M  +    P   T+ +V+ AC   E AF GK ++HG  
Sbjct: 344 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE-AFAGKEAVHGYV 402

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K  M  +  VQNAL+ MY R      A  +F      ++ +WN +I+          A 
Sbjct: 403 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 462

Query: 558 ELFRHLE------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           +L R ++        PN I+++++L  C  L     GK+IHG+        +  + SAL+
Sbjct: 463 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 522

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTK 655
           DMY+ C               ++   W+ +I AYG HG G EA  LF  M  SG  RP +
Sbjct: 523 DMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNE 582

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + ++ L+ACSHSG+VD GLQ ++ M  ++ V P  +   C+VD+LGR+G+L EAY  + 
Sbjct: 583 VTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVT 642

Query: 716 NLPI-QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           ++   + +   W  ML AC  H +  +G+   E L +LEPE   +Y+ L N+Y A G+W 
Sbjct: 643 SMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWT 702

Query: 775 DAVEI 779
            A E+
Sbjct: 703 RAAEV 707



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 228/509 (44%), Gaps = 35/509 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +LL+ Y+ +     +  LF        DVVTWN M++  V++      +    +MV  G+
Sbjct: 208 ALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV 267

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSSE 128
           R D  T    + A +++  L  GR +H   IK   + A+S + +  V+MYA    +  + 
Sbjct: 268 RPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKAR 327

Query: 129 CTF-----SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVA 182
             F     SG        WN ++ G       E+ L  F  M   +G      +++S + 
Sbjct: 328 QVFDMVPDSGKQLG---MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 384

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A     +  + +H   +K G   + +V   N+L+ MY++ G  + A R F  +   DV
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQ--NALMDMYARLGKTDVARRIFAMVDLPDV 442

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSV 300
           VSWN +I G  + G   +AF L  EMQ +    V P+  T++TL+  CA       G+ +
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL 355
           HGYA+R  L  D+ + ++L+D Y+K   L+ +  +F+ + P  + ++WN +I      GL
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL-PRRNTITWNVLIMAYGMHGL 561

Query: 356 FKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGV 406
             E   L  + + S        T +A L +C+    ++ G  + H  +   G       +
Sbjct: 562 GGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL 621

Query: 407 NALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
             ++ +    G L  A++++  + +     S W+ ++ AC   +N H  E         +
Sbjct: 622 ACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELE 681

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKS 492
            + AS   V L N+ SA G    A E +S
Sbjct: 682 PEEAS-HYVLLCNIYSAAGQWTRAAEVRS 709



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +     +L+  Y+ +   + +  +F      DVV+WN +IT CV    V      
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             EM    E G+  ++ TL+ ++     +    +G+ +H  +++  +  D ++ +  V+M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSGEQADN-V 175
           YAKCG L  S   F  +   +T++WN  IM+  +H    E  +L+ R M  SGE   N V
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR-MTASGEARPNEV 583

Query: 176 SLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           +  +A+AA +  G +  G ++ HA+    G E +P   +   ++ +  + G ++ A
Sbjct: 584 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP--DILACVVDILGRAGRLDEA 637


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 186/626 (29%), Positives = 309/626 (49%), Gaps = 41/626 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNA 247
           L+  + +HA  +  GY  S  ++    L+  Y++   G +  A R F GM  ++  +WNA
Sbjct: 73  LTEVRRLHAALLVRGYHRSTVLAA--QLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNA 130

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA--- 304
           +I G    G+F EA     +M    SV  D  T   ++  CA    + +GR V       
Sbjct: 131 VIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETD 190

Query: 305 -IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----E 358
             R +   ++ +  +L+D ++K   L +A  +F ++  + DL SW +MI G  +     E
Sbjct: 191 IARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMG-VRDLASWTAMIGGAVRGGDWLE 249

Query: 359 MLYLCSQ-----FSFSTLL--AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           ++ L  +     F   +++   ++P+C   + L  G ++H + +K G  ++    NAL+ 
Sbjct: 250 VMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVD 309

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  C  L  A SL   I H  D   W+ +I   +QN  +  ++  F  M       P+S
Sbjct: 310 MYCKCARLDMAASLFWSIDHK-DVFSWSTIIAGHSQNRIYNVSVSLFTEMVAS-GIKPNS 367

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T+ +++ +   L L   GK +H  +L++ +     + +ALI  Y R   I+ A  VFE 
Sbjct: 368 TTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEF 427

Query: 532 CYNCNLCTWNCMISAFSQNK---AEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
               +L   N MI  +  NK   + +R L         P+ +++VS+L  C Q   L  G
Sbjct: 428 KPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQG 487

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K++H +           +++AL DMY  C               ++   ++++IS+ G H
Sbjct: 488 KELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKH 547

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   +A  LF  M   G+ P K + ++LLS CSH GL+D+GL +Y++ML +Y++ P+ EH
Sbjct: 548 GHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEH 607

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + CIVD+  RSGKL +A+ FI NL   P+  V G +LSAC  H    + + VAE +F+  
Sbjct: 608 YSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFEQN 667

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P + GY+I LSN+Y + G W +   I
Sbjct: 668 PNDPGYHILLSNVYASAGMWSEVTRI 693



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/598 (24%), Positives = 276/598 (46%), Gaps = 42/598 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG+      +  L+ AY+ +       ++ +F     ++   WNA+I   V+       L
Sbjct: 86  RGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLVDAGRFSEAL 145

Query: 59  HFFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV-- 115
            ++ +MV +G +  D  T   ++ A   +  ++QGR V   +++  +    +  NVFV  
Sbjct: 146 RWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQ-ENVETDIARGIAKGNVFVQC 204

Query: 116 ---NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
              +M+AKCG L  +   F  M   D  SW  ++ G +      + +   + M   G + 
Sbjct: 205 ALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRP 264

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D++  ++ + A   + EL  G  +H   +K G  D   + V N+L+ MY +C  ++ A  
Sbjct: 265 DSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDD--ICVPNALVDMYCKCARLDMAAS 322

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            FW +  KDV SW+ II G + N  +  +  L  EM +   ++P+  T+ +++   ++  
Sbjct: 323 LFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEM-VASGIKPNSTTIASILPSISELR 381

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           LLR G+ +H +++R  L +   + ++L+DFY +   +  A+++F    P NDLV  NSMI
Sbjct: 382 LLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFE-FKPKNDLVVLNSMI 440

Query: 353 SGLFKEMLYLCSQFSFS------------------TLLAILPSCNSPESLEFGKSIHCWQ 394
            G      Y+ ++ S S                  T++++LP CN P  L  GK +H + 
Sbjct: 441 RG------YVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYA 494

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++   S+     NAL  MY  CG L  A  +   ++   +T  +N +I +  ++GH  +A
Sbjct: 495 IRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTER-NTVTYNTLISSLGKHGHADQA 553

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALI 513
              F  M ++   SPD VT V ++S C +  L  +G   +   L+   +  D    + ++
Sbjct: 554 FILFDLM-KRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIV 612

Query: 514 TMYGRCRDIKSASTVFESCYNC-NLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNE 569
            +Y R   +  A +   +      +    C++SA    ++ ++  L   R  E  PN+
Sbjct: 613 DLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFEQNPND 670



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 207/461 (44%), Gaps = 18/461 (3%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           +D+ +W AMI   V     +  +     M  EG R DS     ++ A  ++  L+ G  +
Sbjct: 229 RDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMAL 288

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H  ++K G+  D  + N  V+MY KC  L+ +   F  +   D  SW+TI++G   N   
Sbjct: 289 HGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIY 348

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
              +  F EM  SG + ++ +++S + + + L  L YGK IH   ++   E S +++  +
Sbjct: 349 NVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLA--S 406

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +LI  Y + G I  A+  F      D+V  N++I G+ +N K  E+   L    L   + 
Sbjct: 407 ALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVN-KDSESALRLLRALLKEGLR 465

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  TVV+++ LC     L +G+ +H YAIR  +     + N+L D Y K   L  A  +
Sbjct: 466 PDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKI 525

Query: 336 FNAIAPMNDLVSWNSMISGLFKE--------MLYLCSQFSFS----TLLAILPSCNSPES 383
           F  +   N  V++N++IS L K         +  L  +   S    T +A+L  C+    
Sbjct: 526 FLLMTERN-TVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGL 584

Query: 384 LEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           ++ G   +   L+      +    + ++ +Y   G L  A+S +  +    +      ++
Sbjct: 585 IDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGCLL 644

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPD-SVTLVNVISACG 482
            AC  +     A    + + +Q    P   + L NV ++ G
Sbjct: 645 SACRDHHRMDIAELVAERIFEQNPNDPGYHILLSNVYASAG 685


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 192/625 (30%), Positives = 312/625 (49%), Gaps = 47/625 (7%)

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           + H   IK G     YVS  N ++  Y + G +  A   F  M  +D VSWN +I G+  
Sbjct: 21  LTHCYAIKCGSISDIYVS--NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
            GK E+A+ L   M+   S + D  +   L+   A       G  VHG  I+     ++ 
Sbjct: 79  CGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY 137

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF-------- 366
           + +SL+D Y+K   +  A   F  I+  N  VSWN++I+G F ++  + + F        
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNS-VSWNALIAG-FVQVRDIKTAFWLLGLMEM 195

Query: 367 ---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                    +F+ LL +L   + P      K +H   LKLG  +     NA++  Y +CG
Sbjct: 196 KAAVTMDAGTFAPLLTLL---DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  +   +  + D   WN +I   +++   + A + F  M Q+     D  T   +
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGL 311

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR--CRDIKSASTVFESCYNC 535
           +SAC   E    GKSLHG+ +K  +   T   NALI+MY +     ++ A ++FES  + 
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN +I+ F+Q      A++ F +L   E + ++ +  ++L +C+ L  L+ G+QIH
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431

Query: 593 GHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKG 636
                 GF  N F+ S+L+ MYS C                 S  AW++MI  Y  HG G
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLG 491

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
             +++LF +MCN  ++    +  ++L+ACSH+GL+ EGL+  N M   Y ++P  EH+  
Sbjct: 492 QVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAA 551

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
            VD+LGR+G + +A E I+++P+ P P V    L  C   G+ +M  QVA  L ++EPE+
Sbjct: 552 AVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPED 611

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              Y+SLS+MY  L +W++   + K
Sbjct: 612 HFTYVSLSHMYSDLKKWEEKASVKK 636



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 182/653 (27%), Positives = 301/653 (46%), Gaps = 47/653 (7%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           + HC +IK G I+D  + N  ++ Y K G L  +   F  M   D+VSWNT++SG     
Sbjct: 21  LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
             E     F  M  SG   D  S S  +   A +     G+ +H L IK GYE + YV  
Sbjct: 81  KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG- 139

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            +SL+ MY++C  +E A  AF  ++  + VSWNA+I GF      + AF LL  M++  +
Sbjct: 140 -SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  D  T   L++L  D +     + VH   ++  L +++ + N+++  Y+   S+S A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F+ +    DL+SWNSMI+G            LF +M     +    T   +L +C+  
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN--CGDLVAAFSLLQRISHNSDTSCWN 439
           E   FGKS+H   +K G    T   NAL+ MYI    G +  A SL + +  + D   WN
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWN 377

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I    Q G  ++A+K F S  +      D      ++ +C +L     G+ +H LA K
Sbjct: 378 SIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN-LCTWNCMISAFSQNKAEVRALE 558
           S    +  V ++LI MY +C  I+SA   F+   + +    WN MI  ++Q+     +L+
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  +     + + ++  +IL+AC+  G+++ G ++      L   E  +     ++ Y 
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL------LNLMEPVYKIQPRMEHY- 549

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                AA   ++   G   K  E IE      +  + P    + + L  C   G ++   
Sbjct: 550 -----AAAVDLLGRAGLVNKAKELIE------SMPLNPDPMVLKTFLGVCRACGEIEMAT 598

Query: 676 QYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQE---AYEFIKNLPIQPKPG 724
           Q  N++LE   + PE    +V +  M     K +E     + +K   ++  PG
Sbjct: 599 QVANHLLE---IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 176/674 (26%), Positives = 303/674 (44%), Gaps = 74/674 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++ +  S  +L +Y    +   +  LF E   +D V+WN MI+       +      F
Sbjct: 30  GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLF 89

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G   D  +   ++  +  +     G  VH L IK G   +  + +  V+MYAKC
Sbjct: 90  TCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKC 149

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F  +   ++VSWN +++G +     +        M    E    V++ +  
Sbjct: 150 ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM----EMKAAVTMDAGT 205

Query: 182 AAS--ACLGELSYG---KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            A     L +  +    K +HA  +KLG +    +++ N++IS Y+ CG +  A+R F G
Sbjct: 206 FAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE--ITICNAMISSYADCGSVSDAKRVFDG 263

Query: 237 M-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           +   KD++SWN++I GF+ +   E AF+L  +MQ    VE DI T   L+S C+      
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSGEEHQI 322

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSK--SNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            G+S+HG  I++ L       N+L+  Y +  + ++  A  LF ++    DL+SWNS+I+
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS-KDLISWNSIIT 381

Query: 354 GLFKEML---------YLCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           G  ++ L         YL S       ++FS   A+L SC+   +L+ G+ IH    K G
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS---ALLRSCSDLATLQLGQQIHALATKSG 438

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F +N   +++L+ MY  CG + +A    Q+IS    T  WN +I+   Q+G  Q ++  F
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMY 516
             M   QN   D VT   +++AC +  L  EG  L  L ++ +  +  R+++  A + + 
Sbjct: 499 SQMC-NQNVKLDHVTFTAILTACSHTGLIQEGLELLNL-MEPVYKIQPRMEHYAAAVDLL 556

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSIL 576
           GR   +                           NKA+    EL   +   P+ + + + L
Sbjct: 557 GRAGLV---------------------------NKAK----ELIESMPLNPDPMVLKTFL 585

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---NAAWSSMISAYGYH 633
             C   G +    Q+  H+  +   E+ F   +L  MYS+ K     A+   M+   G  
Sbjct: 586 GVCRACGEIEMATQVANHLLEIE-PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVK 644

Query: 634 G-KGWEAIELFHEM 646
              GW  IE+ +++
Sbjct: 645 KVPGWSWIEIRNQV 658


>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 176/546 (32%), Positives = 277/546 (50%), Gaps = 53/546 (9%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           +++ L+ LC D    +  +  H   +      +  +   L+  Y+    L+ +  +F ++
Sbjct: 30  SLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV 89

Query: 340 APMNDLVSWNSMISG------------LFKEMLY---LCSQFSFSTLLAILPSCNSPESL 384
                +  WNS+I+G            LF+EM     L   ++ +T+  +       E L
Sbjct: 90  EA-KSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGEL---EDL 145

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             GK IH   +++GF ++ +  N+LM MY  CG+   A  +     H  +   +N+VI  
Sbjct: 146 VSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHR-NVGSFNVVISG 204

Query: 445 CT--QNGHF--QEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEGKSLH----- 494
           C   +N +F   + +  F    Q +    D+ T+ +++  C G+      G+ LH     
Sbjct: 205 CAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVK 264

Query: 495 -GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            GL LK  M  D  + ++LI MY R + +     VF+   N N+  W  MI+ + QN A 
Sbjct: 265 NGLDLK--MDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAP 322

Query: 554 VRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
             AL L R ++ +    PN++S++S L AC  L  L  GKQIHG    +   ++  + +A
Sbjct: 323 DDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNA 382

Query: 610 LLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           L+DMYS C                K    WSSMISAYG HG+G EAI  +++M   G +P
Sbjct: 383 LIDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKP 442

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              +V+ +LSACS SGLVDEG+  Y +++ +Y+++P  E   C+VDMLGRSG+L +A EF
Sbjct: 443 DMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEF 502

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           IK +P+ P P VWG++L+A   HG+++        L +LEPEN   YISLSN Y +  RW
Sbjct: 503 IKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRW 562

Query: 774 KDAVEI 779
               E+
Sbjct: 563 DVVTEV 568



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 242/523 (46%), Gaps = 31/523 (5%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           +LL ++     +   K  +  H   +  G   ++ L    V+ YA CG+L +S   F  +
Sbjct: 30  SLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV 89

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
                  WN++++G + N+   + L  FREMG +G   D+ +L++       L +L  GK
Sbjct: 90  EAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGK 149

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           +IH  GI++G+     V V NSL+SMY +CG+   A + F     ++V S+N +I G A 
Sbjct: 150 LIHGKGIRIGFVSD--VVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAA 207

Query: 255 --NGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISL-CADSLLLREGRSVHGYAIRRLL 309
             N  F    DL +    M+    + D  TV +L+ + C D+     GR +H Y ++  L
Sbjct: 208 LENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGL 267

Query: 310 GY----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EML 360
                 D+ + +SL+D YS+S  +     +F+ +   N  V W +MI+G  +     + L
Sbjct: 268 DLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYV-WTAMINGYVQNGAPDDAL 326

Query: 361 YLCSQFSFS--------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
            L               +L++ LP+C     L  GK IH + +K+  +++    NAL+ M
Sbjct: 327 VLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDM 386

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A    +  S+  D   W+ +I A   +G  +EAI  +  M  QQ   PD +
Sbjct: 387 YSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKML-QQGFKPDMI 445

Query: 473 TLVNVISACGNLELAFEGKSLH-GLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFE 530
           T+V V+SAC    L  EG S++  L  K  +     +   ++ M GR   +  A   + E
Sbjct: 446 TVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKE 505

Query: 531 SCYNCNLCTWNCMISA-FSQNKAEVRALELFRH-LEFEPNEIS 571
              +     W  +++A      +  R L  +RH LE EP   S
Sbjct: 506 MPLDPGPSVWGSLLTASVIHGNSRTRDLA-YRHLLELEPENPS 547



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 244/515 (47%), Gaps = 24/515 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   +T L++AY+      +S  +F     K V  WN++I   V+N      L  F
Sbjct: 58  GFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALF 117

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G+  D  TL  +     ++  L  G+++H   I+ G ++D  + N  ++MY +C
Sbjct: 118 REMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRC 177

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGC--LHN-NYPEKCLL--YFREMGWSGEQADNVS 176
           G+   +   F      +  S+N ++SGC  L N N+     L  +F  M   G +AD  +
Sbjct: 178 GEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFT 237

Query: 177 LSSAVAAS-ACLGELSYGKVIHALGIKLGYE---DSPYVSVTNSLISMYSQCGDIEAAER 232
           ++S +       G+  YG+ +H   +K G +   DS  V + +SLI MYS+   +    R
Sbjct: 238 VASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSD-VHLGSSLIDMYSRSKKVVLGRR 296

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  ++V  W A+I+G+  NG  ++A  LL  MQ+   + P+  ++++ +  C    
Sbjct: 297 VFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLA 356

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L  G+ +HG++I+  L  D+ + N+L+D YSK  SL  A   F   +   D ++W+SMI
Sbjct: 357 GLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMI 416

Query: 353 S--GL----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           S  GL          + +ML    +    T++ +L +C+    ++ G SI+   +     
Sbjct: 417 SAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEI 476

Query: 401 NNTIGVNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
             T+ + A ++ M    G L  A   ++ +  +   S W  ++ A   +G+ +     ++
Sbjct: 477 KPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYR 536

Query: 460 SMTQQQNASPDS-VTLVNVISACGNLELAFEGKSL 493
            + + +  +P + ++L N  ++    ++  E +++
Sbjct: 537 HLLELEPENPSNYISLSNTYASDRRWDVVTEVRTI 571


>gi|357149296|ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 214/765 (27%), Positives = 366/765 (47%), Gaps = 43/765 (5%)

Query: 12  SLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           SLL A++     E +  +F       + +V W A+++    +      L     M+   +
Sbjct: 43  SLLRAHTRAGRMEPARQVFDAMPPPARSLVAWTAIMSGYATHGPASEALVLLLRMMAWSL 102

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSE 128
           R D     + + A   +   + GR +HC + K G + AD  + N  + MYA C  L  +E
Sbjct: 103 RPDGFVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCAE 162

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+G+   D VSW +++SG   N    + ++ F EM  +G + D  +LS A+ A++ L 
Sbjct: 163 KVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSLA 222

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            LS G  +H   IKLG+ +S ++   N LI  Y +  ++   ++ F  M  KD+VS N +
Sbjct: 223 NLSLGHQLHCCIIKLGFSNSGFLE--NCLIEFYGKSSELHLMQKVFDDMDDKDLVSSNTV 280

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +A N   E+A      M +    E D  T+ +++ +         G  +HGY IR  
Sbjct: 281 IQCYADNMCDEQALSHFRAM-MFEGSECDEFTLGSILHVVTRRGAFDYGMEIHGYLIRAG 339

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
           L  D  +M++LMD Y    +L KA+     + P+  ++ ++ ++ G F + +   S    
Sbjct: 340 LDSDKHVMSALMDMYVNWATLHKAQ----CVLPLR-MLRYHLLVQGKFDQFIVASS---- 390

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
                 L SC S   L  G+ +H + LKL  +++    ++L+ MY  CG L  +  LL  
Sbjct: 391 ------LRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEES-HLLFS 443

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
            +    T+ W+ VI     NG F+ A+  F+ M Q  +  P+  T  +V++AC +L    
Sbjct: 444 TTKYPGTAEWSAVISGNCLNGQFERALHLFRRM-QLDHVRPNEFTYTSVLTACIDLGDVV 502

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G  +HG ++++  G    V  +LI+ Y R      A  +  S  N  + +W+ ++  FS
Sbjct: 503 GGIEIHGNSVRNGYGTHASVVKSLISFYLREGQFHQALKLCLSLSNREI-SWDTLVKEFS 561

Query: 549 QNKAEVRALELFRHLEFEPNEISIVS---ILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q    +  L LF  ++     +   +   IL++C +L +L  G Q H ++   G      
Sbjct: 562 QAGDHIGVLNLFHVIQRSGGVLDYPTACHILTSCGKLKLLCEGLQAHAYLTKRGLASKPC 621

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           ISS L+DMYS C               K+ + W+S+I A+  +G    AI+LF +M    
Sbjct: 622 ISSHLIDMYSKCGTVKDAFDAFRYMSDKNASCWTSVIIAHLENGCPEIAIDLFVQMLRKE 681

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
             PT  + +S+L AC+  GLV E  Q++ +M E Y ++P   H+  ++++LGR+G  +EA
Sbjct: 682 KIPTSLAFLSVLKACAEVGLVSEAFQFFVSMTEVYKIQPSEAHYSHMIEVLGRAGMFREA 741

Query: 711 YEFIKN-LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
             FI + +P +     W  + SA   +G+T++ K   + L  L P
Sbjct: 742 EHFIISVVPSESSASAWSLLCSAAKQNGNTRIMKLAMDKLASLVP 786



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 164/650 (25%), Positives = 275/650 (42%), Gaps = 63/650 (9%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A L  +  LLT Y++      +  +F      D+V+W +M++   EN C    +  F EM
Sbjct: 140 ADLFVANGLLTMYASCRSLGCAEKVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEM 199

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           V  GIR D+ TL + + A + +  L  G  +HC  IK G      L N  +  Y K  +L
Sbjct: 200 VHAGIRCDAFTLSVALRAASSLANLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGKSSEL 259

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           +  +  F  M   D VS NT++     N   E+ L +FR M + G + D  +L S +   
Sbjct: 260 HLMQKVFDDMDDKDLVSSNTVIQCYADNMCDEQALSHFRAMMFEGSECDEFTLGSILHVV 319

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
              G   YG  IH   I+ G +   +  V ++L+ MY     +  A+       C  V+ 
Sbjct: 320 TRRGAFDYGMEIHGYLIRAGLDSDKH--VMSALMDMYVNWATLHKAQ-------C--VLP 368

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
              +     + GKF++                    V + +  CA  L L  GR +H Y 
Sbjct: 369 LRMLRYHLLVQGKFDQFI------------------VASSLRSCASDLDLAAGRMLHAYI 410

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEM 359
           ++  +  D  + +SL+D Y+K   L ++ LLF+          W+++IS     G F+  
Sbjct: 411 LKLNMNSDAFVTSSLVDMYAKCGCLEESHLLFST-TKYPGTAEWSAVISGNCLNGQFERA 469

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L+L  +           T  ++L +C     +  G  IH   ++ G+  +   V +L+  
Sbjct: 470 LHLFRRMQLDHVRPNEFTYTSVLTACIDLGDVVGGIEIHGNSVRNGYGTHASVVKSLISF 529

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y+  G    A  L   +S N + S W+ ++   +Q G     +  F  + Q+     D  
Sbjct: 530 YLREGQFHQALKLCLSLS-NREIS-WDTLVKEFSQAGDHIGVLNLFH-VIQRSGGVLDYP 586

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T  +++++CG L+L  EG   H    K  +     + + LI MY +C  +K A   F   
Sbjct: 587 TACHILTSCGKLKLLCEGLQAHAYLTKRGLASKPCISSHLIDMYSKCGTVKDAFDAFRYM 646

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
            + N   W  +I A  +N     A++LF  +   E  P  ++ +S+L AC ++G++    
Sbjct: 647 SDKNASCWTSVIIAHLENGCPEIAIDLFVQMLRKEKIPTSLAFLSVLKACAEVGLVSEAF 706

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEA 639
           Q              F+S  + ++Y    S A +S MI   G  G   EA
Sbjct: 707 QF-------------FVS--MTEVYKIQPSEAHYSHMIEVLGRAGMFREA 741


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 196/665 (29%), Positives = 323/665 (48%), Gaps = 55/665 (8%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M    +Q D+ +L  A+ ++A L +    + IHA  ++ G    P  +V N+L++ Y++C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 225 GDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           G + AA   F  ++    D VS+N++I    L  ++    D                T  
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRW----DHALAALRAMLAGGHPLTSF 163

Query: 283 TLIS-------LCADSLLLREGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAE 333
           TL+S       L A +  +R GR  H +A++   L G+     N+L+  Y++   ++ A+
Sbjct: 164 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 223

Query: 334 LLFNAIAP-MNDLVSWNSMIS-----GLFKE-------MLYLCSQFSFSTLLAILPSCNS 380
            LF    P   D+V+WN+M+S     G+F E       M+ L  +    T  + LP+C+ 
Sbjct: 224 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 283

Query: 381 PESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT-SCW 438
            E L+ G+ +H + +K    + N+   +AL+ MY     +  A  +   +  +      W
Sbjct: 284 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 343

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK-SLHGLA 497
           N +I    Q G  +EA++ F  M  +    P   T+ +V+ AC   E AF GK ++HG  
Sbjct: 344 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSE-AFAGKEAVHGYV 402

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K  M  +  VQNAL+ MY R      A  +F      ++ +WN +I+          A 
Sbjct: 403 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 462

Query: 558 ELFRHLE------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
           +L R ++        PN I+++++L  C  L     GK+IHG+        +  + SAL+
Sbjct: 463 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 522

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTK 655
           DMY+ C               ++   W+ +I AYG HG G EA  LF  M  SG  RP +
Sbjct: 523 DMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNE 582

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + ++ L+ACSHSG+VD GLQ ++ M  ++ V P  +   C+VD+LGR+G+L EAY  + 
Sbjct: 583 VTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVT 642

Query: 716 NLPI-QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           ++   + +   W  ML AC  H +  +G+   E L +LEPE   +Y+ L N+Y A G+W 
Sbjct: 643 SMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWT 702

Query: 775 DAVEI 779
            A E+
Sbjct: 703 RAAEV 707



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 228/509 (44%), Gaps = 35/509 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +LL+ Y+ +     +  LF        DVVTWN M++  V++      +    +MV  G+
Sbjct: 208 ALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV 267

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG-MIADSSLCNVFVNMYAKCGDLNSSE 128
           R D  T    + A +++  L  GR +H   IK   + A+S + +  V+MYA    +  + 
Sbjct: 268 RPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKAR 327

Query: 129 CTF-----SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVA 182
             F     SG        WN ++ G       E+ L  F  M   +G      +++S + 
Sbjct: 328 QVFDMVPDSGKQLG---MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 384

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A     +  + +H   +K G   + +V   N+L+ MY++ G  + A R F  +   DV
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQ--NALMDMYARLGKTDVARRIFAMVDLPDV 442

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSV 300
           VSWN +I G  + G   +AF L  EMQ +    V P+  T++TL+  CA       G+ +
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL 355
           HGYA+R  L  D+ + ++L+D Y+K   L+ +  +F+ + P  + ++WN +I      GL
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL-PRRNTITWNVLIMAYGMHGL 561

Query: 356 FKEMLYLCSQFSFS--------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGV 406
             E   L  + + S        T +A L +C+    ++ G  + H  +   G       +
Sbjct: 562 GGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL 621

Query: 407 NALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
             ++ +    G L  A++++  + +     S W+ ++ AC   +N H  E         +
Sbjct: 622 ACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELE 681

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKS 492
            + AS   V L N+ SA G    A E +S
Sbjct: 682 PEEAS-HYVLLCNIYSAAGQWTRAAEVRS 709



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 11/257 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +     +L+  Y+ +   + +  +F      DVV+WN +IT CV    V      
Sbjct: 405 RGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQL 464

Query: 61  FGEMV---EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             EM    E G+  ++ TL+ ++     +    +G+ +H  +++  +  D ++ +  V+M
Sbjct: 465 AREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDM 524

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSGEQADN-V 175
           YAKCG L  S   F  +   +T++WN  IM+  +H    E  +L+ R M  SGE   N V
Sbjct: 525 YAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR-MTASGEARPNEV 583

Query: 176 SLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           +  +A+AA +  G +  G ++ HA+    G E +P   +   ++ +  + G ++ A    
Sbjct: 584 TFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP--DILACVVDILGRAGRLDEAYAMV 641

Query: 235 WGMTC--KDVVSWNAII 249
             M    + V +W+ ++
Sbjct: 642 TSMEAGEQQVSAWSTML 658


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 189/609 (31%), Positives = 288/609 (47%), Gaps = 112/609 (18%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D +    L+  C  S  + E R VH   I+     ++ + N L+D Y K   L  A  +F
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 337 -----------NAI-------------------APMNDLVSWNSMISGL-----FKEML- 360
                      NA+                    P  D  SWN+M+SG      F+E L 
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 361 ---------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
                    ++ +++SF + L+   +C     L  G  IH    K  +S +    +AL+ 
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALS---ACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVD 194

Query: 412 MYINCGDLVAAFSLLQRISHNSDTS---CWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           MY  C  + +A    QR   + D      WN +I    QNG   +A++ F  M       
Sbjct: 195 MYSKCRVVASA----QRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNC-GIE 249

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCR------- 520
           PD +TL +V SAC +L    EG  +H   +K      D  + NAL+ MY +CR       
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 521 ------------------------DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
                                    +K+A  +F +    N+ +WN +I+ ++QN     A
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF------QENSFIS 607
           + LF  L+ E   P   +  ++L+AC  L  L+ G+Q H H+   GF        + F+ 
Sbjct: 370 VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG 429

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           ++L+DMY  C               + N +W++MI  Y  +G G EA+E+F EM  SG R
Sbjct: 430 NSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGER 489

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   ++I +LSACSH+GLV+EG  Y+ +M  E+ + P  +H+ C+VD+LGR+G L EA  
Sbjct: 490 PDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANN 549

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I+ +P++P   VWG++L+AC  HG+  +GK VAE L +++P N G Y+ LSNMY  LGR
Sbjct: 550 LIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGR 609

Query: 773 WKDAVEIGK 781
           WKD V + K
Sbjct: 610 WKDVVRVRK 618



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 258/603 (42%), Gaps = 119/603 (19%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            DS+    ++    +   + + R+VH   IK    ++  + N  V++Y KCG L  +   
Sbjct: 17  LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76

Query: 131 FSGMHCADTVSWNTIM-------------------------------SGCLHNNYPEKCL 159
           F  M   +T SWN ++                               SG    +  E+ L
Sbjct: 77  FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
            +  +M       +  S  SA++A A L +LS G  IH L  K  Y    Y+   ++L+ 
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMG--SALVD 194

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MYS+C  + +A+RAF  M  +++VSWN++I  +  NG   +A ++   M +   +EPD  
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM-MNCGIEPDEI 253

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
           T+ ++ S CA    +REG  +H   ++      DL++ N+L+D Y+K   +++A L+F+ 
Sbjct: 254 TLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDR 313

Query: 339 IAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA------------------------- 373
           + P+ D+VS  SM+SG  K      ++  FS ++                          
Sbjct: 314 M-PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRL 372

Query: 374 ------------------ILPSCNSPESLEFGKSIHCWQLKLGF-------SNNTIGVNA 408
                             +L +C +   L+ G+  H   LK GF       S+  +G N+
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG-NS 431

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY+ CG +     + +R+    + S WN +IV   QNG+  EA++ F+ M       
Sbjct: 432 LIDMYMKCGLVEDGRLVFERMLERDNVS-WNAMIVGYAQNGYGTEALEIFREML-VSGER 489

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD VT++ V+SAC +  L  EG+       +S+      +++ L+ +             
Sbjct: 490 PDHVTMIGVLSACSHAGLVEEGRCY----FQSMT-----IEHGLVPVKDH---------- 530

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                      + CM+    +      A  L + +  EP+ +   S+L+AC   G +  G
Sbjct: 531 -----------YTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLG 579

Query: 589 KQI 591
           K +
Sbjct: 580 KYV 582



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 217/493 (44%), Gaps = 59/493 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L A +     + +L LF     +D  +WNAM++   +       L F  +M  E    
Sbjct: 90  AVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVL 149

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  +    +SA   +  L  G  +H L  K+    D  + +  V+MY+KC  + S++  F
Sbjct: 150 NEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAF 209

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
             M   + VSWN++++ C   N P  K L  F  M   G + D ++L+S  +A A L  +
Sbjct: 210 DDMDVRNIVSWNSLIT-CYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAI 268

Query: 191 SYGKVIHALGIK----------------------------LGYEDSPYVSVTN--SLISM 220
             G  IHA  +K                            L ++  P   V +  S++S 
Sbjct: 269 REGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSG 328

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
           Y++   ++AA   F  M  ++VVSWNA+I G+  NG+ EEA  L   ++   S+ P   T
Sbjct: 329 YAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK-RESIWPTHYT 387

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLSKAEL 334
              L++ CA+   L+ GR  H + ++    +      D+ + NSL+D Y K   +    L
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F  +    D VSWN+MI G            +F+EML    +    T++ +L +C+   
Sbjct: 448 VFERMLE-RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAG 506

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNA----LMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +E G+   C+   +   +  + V      ++ +    G L  A +L+Q +    D   W
Sbjct: 507 LVEEGR---CYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVW 563

Query: 439 NIVIVACTQNGHF 451
             ++ AC  +G+ 
Sbjct: 564 GSLLAACKVHGNI 576



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 207/469 (44%), Gaps = 74/469 (15%)

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           GL ++++   S    S    +L +C   +S+   + +H   +K  FS+     N L+ +Y
Sbjct: 5   GLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY 64

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ---------- 463
             CG L  A  +   +    +T  WN V+ A T+ G   EA+  FK M +          
Sbjct: 65  GKCGFLEDARKVFDHMQQR-NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMV 123

Query: 464 ----QQNASPDSVTLV----------------NVISACGNLELAFEGKSLHGLALKSLMG 503
               Q++   +++  V                + +SAC  L     G  +HGL  KS   
Sbjct: 124 SGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYS 183

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           LD  + +AL+ MY +CR + SA   F+     N+ +WN +I+ + QN    +ALE+F  +
Sbjct: 184 LDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM 243

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-HLGFQENSFISSALLDMYSNCKS 619
                EP+EI++ S+ SAC  L  +R G QIH  V  H  ++ +  + +AL+DMY+ C+ 
Sbjct: 244 MNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCR- 302

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV--ISLLSACSHSGLVDEGLQY 677
                          +  EA  +F  M      P +  V   S++S  + +  V      
Sbjct: 303 ---------------RVNEARLVFDRM------PLRDVVSETSMVSGYAKASSVKAARLM 341

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACS 734
           ++NM+E   V         ++    ++G+ +EA   +  +K   I P    +G +L+AC+
Sbjct: 342 FSNMMERNVVSWNA-----LIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACA 396

Query: 735 HHGDTKMGKQVAELLFKL-------EPENVGYYISLSNMYVALGRWKDA 776
           +  D K+G+Q    + K        E  ++    SL +MY+  G  +D 
Sbjct: 397 NLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG 445



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 180/416 (43%), Gaps = 54/416 (12%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  YS      S+   F +   +++V+WN++IT   +N      L  F  M+  GI 
Sbjct: 190 SALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSEC 129
            D  TL  + SA   ++ +++G  +H   +K      D  L N  V+MYAKC  +N +  
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309

Query: 130 TFSGMHCAD-------------------------------TVSWNTIMSGCLHNNYPEKC 158
            F  M   D                                VSWN +++G   N   E+ 
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369

Query: 159 LLYF----REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-----EDSP 209
           +  F    RE  W      + +  + + A A L +L  G+  H   +K G+     EDS 
Sbjct: 370 VRLFLLLKRESIWP----THYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSD 425

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            + V NSLI MY +CG +E     F  M  +D VSWNA+I G+A NG   EA ++  EM 
Sbjct: 426 -IFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREM- 483

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS----LMDFYSK 325
           L+    PD  T++ ++S C+ + L+ EGR    Y     + + L+ +      ++D   +
Sbjct: 484 LVSGERPDHVTMIGVLSACSHAGLVEEGRC---YFQSMTIEHGLVPVKDHYTCMVDLLGR 540

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSP 381
           +  L +A  L   +    D V W S+++           ++    LL I P  + P
Sbjct: 541 AGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGP 596



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 10/264 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L  + + TS+++ Y+  S  +++  +F     ++VV+WNA+I    +N      +  
Sbjct: 313 RMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRL 372

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC------LSIKAGMIADSSLCNVF 114
           F  +  E I     T   +++A   +  LK GR  H          K+G  +D  + N  
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSL 432

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MY KCG +      F  M   D VSWN ++ G   N Y  + L  FREM  SGE+ D+
Sbjct: 433 IDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDH 492

Query: 175 VSLSSAVAASACLGELSYGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           V++   ++A +  G +  G+    ++ I+ G    P       ++ +  + G ++ A   
Sbjct: 493 VTMIGVLSACSHAGLVEEGRCYFQSMTIEHGL--VPVKDHYTCMVDLLGRAGCLDEANNL 550

Query: 234 FWGMTCK-DVVSWNAIIDGFALNG 256
              M  + D V W +++    ++G
Sbjct: 551 IQTMPMEPDAVVWGSLLAACKVHG 574


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 188/721 (26%), Positives = 356/721 (49%), Gaps = 83/721 (11%)

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
           +TQ+   K G++   + +   M   +++  N  ++ +AK G ++ +   F GM   + VS
Sbjct: 22  ITQLG--KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVS 79

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           WN++++  LHN+  E+    F +M       D  S +  +      GEL+  + +  L  
Sbjct: 80  WNSMIAAYLHNDRVEEARQLFDKM----PTRDLYSWTLMITCYTRNGELAKARNLFNL-- 133

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
            L Y+ +P     N++++ Y++    + A R F  M  KD+VSWN+++ G+  NG+    
Sbjct: 134 -LPYKWNPVC--CNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLG 190

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
                EM      E D+ +     +L  D  +     +       ++   + +   +++ 
Sbjct: 191 LQFFEEM-----AERDVVS----WNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLC 241

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +++   +++A  LF+ + P+ ++V+WN+MI+                   A + +C+  
Sbjct: 242 GFARFGKIAEARRLFDQM-PIRNVVAWNAMIA-------------------AYVQNCHVD 281

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           E++     +           N+I    +++ Y+  G L  A  LL ++ +  + +    +
Sbjct: 282 EAISLFMEMP--------EKNSISWTTVINGYVRMGKLDEARQLLNQMPYR-NVAAQTAM 332

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSV---TLVNVISACGNLELAFEGKSLHGLAL 498
           I    QN    +A + F  ++ +     D V   T++   S CG ++     ++LH    
Sbjct: 333 ISGYVQNKRMDDARQIFNQISIR-----DVVCWNTMIAGYSQCGRMD-----EALH--LF 380

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K ++  D    N ++  Y +   + +A  +FE     N+ +WN +IS  +QN + + AL+
Sbjct: 381 KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALK 440

Query: 559 LFR---HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            F    H   +P++ +    LS+C  L  L+ GKQ+H  V   G+  + F+S+AL+ MY+
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYA 500

Query: 616 NCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C S ++               W+S+I+AY  +G G EA++LFH+M   G+ P + + + 
Sbjct: 501 KCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVG 560

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +LSACSH GL+D+GL+ +  M++ Y++ P  EH+ C+VD+LGR+G+L+EA++ ++ + I 
Sbjct: 561 ILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKIN 620

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIG 780
              G+WGA+L AC  HG+ ++ K  AE L + EP     Y+ LSNM    GRW +   + 
Sbjct: 621 ANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVR 680

Query: 781 K 781
           +
Sbjct: 681 R 681



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 156/641 (24%), Positives = 279/641 (43%), Gaps = 96/641 (14%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  S+++A++       +  LF     +++V+WN+MI A + N  V      F +M    
Sbjct: 48  THNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR- 106

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGR-VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
              D  +  ++++  T+   L + R + + L  K   +     CN  V  YAK    + +
Sbjct: 107 ---DLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVC----CNAMVAGYAKNRQFDEA 159

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D VSWN++++G   N      L +F EM     + D VS +  V     +
Sbjct: 160 RRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA----ERDVVSWNLMVDGFVEV 215

Query: 188 GELS--------------------------YGKVIHALGIKLGYEDSPYVSVT--NSLIS 219
           G+L+                          +GK+  A  +   ++  P  +V   N++I+
Sbjct: 216 GDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRL---FDQMPIRNVVAWNAMIA 272

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
            Y Q   ++ A   F  M  K+ +SW  +I+G+   GK +EA  LL++M        ++A
Sbjct: 273 AYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYR-----NVA 327

Query: 280 TVVTLISLCADSLLLREGRSVH----------------GYA-----------IRRLLGYD 312
               +IS    +  + + R +                 GY+            ++++  D
Sbjct: 328 AQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKD 387

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF---- 368
           ++  N+++  Y++   +  A  +F  +   N +VSWNS+ISGL +   YL +  SF    
Sbjct: 388 IVSWNTMVASYAQVGQMDAAIKIFEEMKEKN-IVSWNSLISGLTQNGSYLDALKSFMLMG 446

Query: 369 --------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                   ST    L SC    +L+ GK +H   +K G++ +    NAL+ MY  CG + 
Sbjct: 447 HEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSIS 506

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +A  L + I H  D   WN +I A   NG+ +EA+K F  M + +  +PD VT V ++SA
Sbjct: 507 SAELLFKDIDH-FDVVSWNSLIAAYALNGNGREALKLFHKM-EVEGVAPDEVTFVGILSA 564

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNL 537
           C ++ L  +G  L    +++   ++   ++   ++ + GR   ++ A  +      N N 
Sbjct: 565 CSHVGLIDQGLKLFKCMVQAY-NIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANA 623

Query: 538 CTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
             W  ++ A       E+      + LEFEP++ S   +LS
Sbjct: 624 GIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLS 664



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/344 (20%), Positives = 146/344 (42%), Gaps = 48/344 (13%)

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA-CGNLELAFEGKSLHGLA 497
           N+ I    ++G   EAIK F+ MT +     ++VT  ++ISA   N  ++   +   G+ 
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMTHK-----NTVTHNSMISAFAKNGRISDARQLFDGMP 73

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            ++++       N++I  Y     ++ A  +F+     +L +W  MI+ +++N    +A 
Sbjct: 74  QRNIVSW-----NSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKAR 128

Query: 558 ELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            LF  L ++ N +        C  +        + G+  +  F E   +  A+       
Sbjct: 129 NLFNLLPYKWNPV-------CCNAM--------VAGYAKNRQFDEARRLFDAM-----PA 168

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K   +W+SM++ Y  +G+    ++ F EM    +     S   ++      G ++   ++
Sbjct: 169 KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDLNSSWEF 224

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH-- 735
           +     E    P T   V ++    R GK+ EA      +PI+     W AM++A     
Sbjct: 225 F-----EKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAAYVQNC 278

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           H D     +   L  ++  +N   + ++ N YV +G+  +A ++
Sbjct: 279 HVD-----EAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQL 317



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 7/157 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  S +L+T Y+      S+  LF +  + DVV+WN++I A   N      L  F
Sbjct: 484 GYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLF 543

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCL--SIKAGMIADSSLCNVFVNMY 118
            +M  EG+  D  T + I+SA + +  + QG ++  C+  +     +A+   C   V++ 
Sbjct: 544 HKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYAC--MVDLL 601

Query: 119 AKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            + G L  +     GM   A+   W  ++  C +H N
Sbjct: 602 GRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGN 638


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 168/532 (31%), Positives = 276/532 (51%), Gaps = 37/532 (6%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           V +LI  C+ +  LR+G  +H  AI+     D+++ N +++ Y+K   L +A  +F+ ++
Sbjct: 6   VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
             N LVSW++MISG            LF ++  + +++ +++   ++ +C S + L  GK
Sbjct: 66  ERN-LVSWSAMISGYEQIGEPISALGLFSKLNIVPNEYVYAS---VISACASLKGLVQGK 121

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            IH   LK G  + +   NAL+ MY+ CG    A  L    +   +   +N +I    +N
Sbjct: 122 QIHGQALKFGLDSVSFVSNALITMYMKCGKCSDAL-LAYNEALELNPVAYNALITGFVEN 180

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
               +  +  + M  Q    PD  T V ++  C + +    G+ LH   +K  +     +
Sbjct: 181 QQPDKGFEVLR-MMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFI 239

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----E 564
            N +ITMY +   ++ A   F S    +L +WN  IS+ S      +ALE F+ +     
Sbjct: 240 GNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECR 299

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
             P+E +  S L+AC+ L  + +GKQIHGH+      ++    +AL++MY+ C       
Sbjct: 300 VRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAY 359

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   ++  +W++MI+ +G HG G +A ELF +M   G++P   + + LL+A +H+G
Sbjct: 360 YIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAG 419

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVDEGL Y+N+M E Y + PE EH  C++D+LGR+G+L EA E++K  P      V G++
Sbjct: 420 LVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSL 479

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           LSAC  HGD   GK  A  L KL+P     Y+ LSN+Y +   W    E  K
Sbjct: 480 LSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWK 531



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 235/527 (44%), Gaps = 58/527 (11%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++   ++   L+QG  +H ++IK    +D  + N  +N+YAKC  L  +   F  M   +
Sbjct: 9   LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            VSW+ ++SG      P   L  F ++       +    +S ++A A L  L  GK IH 
Sbjct: 69  LVSWSAMISGYEQIGEPISALGLFSKLNIV---PNEYVYASVISACASLKGLVQGKQIHG 125

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +K G +   +VS  N+LI+MY +CG    A  A+      + V++NA+I GF  N + 
Sbjct: 126 QALKFGLDSVSFVS--NALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQP 183

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           ++ F++L  M       PD  T V L+  C     L+ G  +H   I+  L     + N 
Sbjct: 184 DKGFEVL-RMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNL 242

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC--- 363
           ++  YSK N L +AE  F +I    DL+SWN+ IS              FKEML  C   
Sbjct: 243 IITMYSKLNLLEEAEKAFRSIEE-KDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVR 301

Query: 364 -SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +F+F++ LA   +C+   S+  GK IH   ++     +    NAL++MY  CG +  A
Sbjct: 302 PDEFTFASALA---ACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKA 358

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           + +  ++ H +  S WN +I     +G   +A + F  M +     PDSVT V +++A  
Sbjct: 359 YYIFSKMEHQNLVS-WNTMIAGFGNHGFGGKAFELFAKM-KTMGVKPDSVTFVGLLTASN 416

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +  L  EG                   N++   YG   +I+                ++C
Sbjct: 417 HAGLVDEGLVYF---------------NSMEETYGISPEIEH---------------FSC 446

Query: 543 MISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
           +I    +      A E  +   F  + + + S+LSAC   G +  GK
Sbjct: 447 LIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGK 493



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 227/510 (44%), Gaps = 21/510 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S  +L  Y+       +  +F E   +++V+W+AMI+   +    +  L  F ++    
Sbjct: 40  VSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKL---N 96

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  +      ++SA   +  L QG+ +H  ++K G+ + S + N  + MY KCG  + + 
Sbjct: 97  IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDAL 156

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             ++     + V++N +++G + N  P+K     R M   G   D  +    +       
Sbjct: 157 LAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRD 216

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G+++H   IKL    + ++   N +I+MYS+   +E AE+AF  +  KD++SWN  
Sbjct: 217 DLKRGELLHCQTIKLKLNSTAFIG--NLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTF 274

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I   +     E+A +   EM     V PD  T  + ++ C+    +  G+ +HG+ IR  
Sbjct: 275 ISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTR 334

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+   N+L++ Y+K   ++KA  +F+ +   N LVSWN+MI+G            LF
Sbjct: 335 LYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQN-LVSWNTMIAGFGNHGFGGKAFELF 393

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            +M  +  +    T + +L + N    ++ G    +  +   G S      + L+ +   
Sbjct: 394 AKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGR 453

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G L  A   +++     DT     ++ AC  +G         + + + Q A+     L+
Sbjct: 454 AGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTSPYVLL 513

Query: 476 NVISACGNL--ELAFEGKSLHGLALKSLMG 503
           + + A   +   +A   K L G  LK   G
Sbjct: 514 SNLYASDEMWDGVAEAWKLLKGSGLKKEPG 543


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 184/675 (27%), Positives = 323/675 (47%), Gaps = 40/675 (5%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D  S+ +++ G   +   ++    F  +   G + D    SS +  SA L +  +G+ +H
Sbjct: 61  DRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLH 120

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
              IK G+ D   VSV  SL+  Y +  + +     F  M  ++VV+W  +I G+A N  
Sbjct: 121 CQCIKFGFLDD--VSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSL 178

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            EE   L   MQ     +P+  T    + + A+  +   G  VH   ++  L   + + N
Sbjct: 179 NEEVLTLFMRMQ-DEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 237

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
           SL++ Y K  ++ KA +LF+    +  +V+WNSMISG            +F  M     +
Sbjct: 238 SLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVR 296

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            S S+  +I+  C + + L F + +HC  +K GF  +     ALM  Y  C  ++ A  L
Sbjct: 297 LSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRL 356

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            +      +   W  +I    QN   +EA+  F  M +++   P+  T   +++A   + 
Sbjct: 357 FKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEM-KRKGVRPNEFTYSVILTALPVIS 415

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            +     +H   +K+     + V  AL+  Y +   +  A+ VF    N ++  W+ M++
Sbjct: 416 PS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLA 471

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACT-QLGVLRHGKQIHGHVFHLGFQ 601
            ++Q      A+++F  L     +PNE +  SIL+ C      +  GKQ HG        
Sbjct: 472 GYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLD 531

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            +  +SSALL MY+                 K   +W+SMIS Y  HG+  +A+++F EM
Sbjct: 532 SSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 591

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
               ++    + I + +AC+H+GLV+EG +Y++ M+ +  + P  EH+ C+VD+  R+G+
Sbjct: 592 KKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 651

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L++A + I N+P      +W  +L+AC  H  T++G+  AE +  + PE+   Y+ LSNM
Sbjct: 652 LEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNM 711

Query: 767 YVALGRWKDAVEIGK 781
           Y   G W++  ++ K
Sbjct: 712 YAESGDWQERAKVRK 726



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 256/518 (49%), Gaps = 31/518 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR +HC  IK G + D S+    V+ Y K  +       F  M   + V+W T++SG   
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYAR 175

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N+  E+ L  F  M   G Q ++ + ++A+   A  G    G  +H + +K G + +  +
Sbjct: 176 NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--I 233

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V+NSLI++Y +CG++  A   F     K VV+WN++I G+A NG   EA  + + M+L 
Sbjct: 234 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL- 292

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             V    ++  ++I LCA+   LR    +H   ++    +D  +  +LM  YSK  ++  
Sbjct: 293 NHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD 352

Query: 332 AELLFNAIAPMNDLVSWNSMIS------------GLFKEMLY---LCSQFSFSTLLAILP 376
           A  LF     + ++VSW +MIS            GLF EM       ++F++S +L  LP
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
             +  E       +H   +K  +  ++    AL+  Y+  G +  A  +   I  N D  
Sbjct: 413 VISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID-NKDIV 464

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF-EGKSLHG 495
            W+ ++    Q G  + AIK F  +T +    P+  T  ++++ C     +  +GK  HG
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELT-KGGVKPNEFTFSSILNVCAATTASMGQGKQFHG 523

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            A+KS +     V +AL+TMY +   I+SA  VF+     +L +WN MIS ++Q+   ++
Sbjct: 524 FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 583

Query: 556 ALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
           AL++F+ +   + + + ++ + + +ACT  G++  G++
Sbjct: 584 ALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEK 621



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 258/563 (45%), Gaps = 30/563 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL  +   TSL+  Y   S F+    +F E   ++VVTW  +I+    N      L  F
Sbjct: 127 GFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLF 186

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M +EG + +S T    +  L +     +G  VH + +K G+     + N  +N+Y KC
Sbjct: 187 MRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 246

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  +   F        V+WN+++SG   N    + L  F  M  +  +    S +S +
Sbjct: 247 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASII 306

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
              A L EL + + +H   +K G+      ++  +L+  YS+C  +  A R F       
Sbjct: 307 KLCANLKELRFTEQLHCSVVKYGFVFDQ--NIRTALMVAYSKCMAMLDALRLFKETGFLG 364

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW A+I GF  N   EEA  L  EM+  + V P+  T   +++    +L +     V
Sbjct: 365 NVVSWTAMISGFLQNDGKEEAVGLFSEMK-RKGVRPNEFTYSVILT----ALPVISPSEV 419

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++        +  +L+D Y K   + +A  +F+ I    D+V+W++M++G      
Sbjct: 420 HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGI-DNKDIVAWSAMLAGYAQAGE 478

Query: 355 ------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                 +F E+       ++F+FS++L +  +  +  S+  GK  H + +K    ++   
Sbjct: 479 TEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTA--SMGQGKQFHGFAIKSRLDSSLCV 536

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            +AL+ MY   G + +A  + +R     D   WN +I    Q+G   +A+  FK M +++
Sbjct: 537 SSALLTMYAKKGHIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKR 594

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKS 524
               DSVT + V +AC +  L  EG+    + ++      T+  N+ ++ +Y R   ++ 
Sbjct: 595 KVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 654

Query: 525 ASTVFESCYNCNLCT-WNCMISA 546
           A  V ++  N    T W  +++A
Sbjct: 655 AMKVIDNMPNLAGSTIWRTILAA 677



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 248/542 (45%), Gaps = 66/542 (12%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLRE 296
           +D  S+ +++ GF+ +G+ +EA  L   +Q +  +E D +   +++ + A   D L    
Sbjct: 60  RDRESYTSLLFGFSRDGRTQEATRLFLNIQHL-GMEMDCSIFSSVLKVSATLCDELF--- 115

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR +H   I+     D+ +  SL+D Y K ++      +F+ +   N +V+W ++ISG  
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERN-VVTWTTLISGYA 174

Query: 355 ----------LFKEMLYLCSQ---FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                     LF  M    +Q   F+F+  L +L           G  +H   +K G   
Sbjct: 175 RNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGR---GLQVHTVVVKNGLDK 231

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                N+L+++Y+ CG++  A  L  +    S  + WN +I     NG   EA+  F SM
Sbjct: 232 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMISGYAANGLDLEALGMFYSM 290

Query: 462 TQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
                   +S +  ++I  C NL EL F  + LH   +K     D  ++ AL+  Y +C 
Sbjct: 291 RLNHVRLSES-SFASIIKLCANLKELRFT-EQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348

Query: 521 DIKSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSIL 576
            +  A  +F E+ +  N+ +W  MIS F QN  +  A+ LF  ++     PNE +   IL
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNA 621
           +A   +       ++H  V    ++ +S + +ALLD Y                + K   
Sbjct: 409 TALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV 464

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-SHSGLVDEGLQYYNN 680
           AWS+M++ Y   G+   AI++F E+   G++P + +  S+L+ C + +  + +G Q++  
Sbjct: 465 AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHG- 523

Query: 681 MLEEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSH 735
               + ++   +  +C+    + M  + G ++ A E  K    + K  V W +M+S  + 
Sbjct: 524 ----FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ--REKDLVSWNSMISGYAQ 577

Query: 736 HG 737
           HG
Sbjct: 578 HG 579


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 291/638 (45%), Gaps = 132/638 (20%)

Query: 276 PDIATVVTLISLCADSLLLREGRS--------VHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           P   ++ TL+ LC + L     +S        VH   I+  L + + +MN+LM+ YSK+ 
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 328 SLSKAELLFNAIA------------------------------PMNDLVSWNSMISG--- 354
               A  LF+ +                               P  D VSW +MI G   
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +  EM+    + S  TL  +L S  +   LE GK +H + +KLG   N   
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183

Query: 406 VNALMHMYINCGDLVAAFSLLQRI------SHNS------------------------DT 435
            N+L++MY  CGD + A  +  R+      S N+                        D 
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I    Q G+   A+  F  M +    SPD  TL +V+SAC NLE    G+ +H 
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303

Query: 496 LALKSLMGLDTRVQNALITMYGRC---------------RDIK----------------- 523
             + +   +   V NALI+MY RC               +D+K                 
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 524 -SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
             A  +F+S  + ++  W  MI  + Q+     A+ LFR +   E  PN  ++ ++LS  
Sbjct: 364 NEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVA 423

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAW 623
           + L  L HGKQIHG     G   +  +S+AL+ MY+                  +   +W
Sbjct: 424 SSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSW 483

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +SMI A   HG   EA+ELF  M   G+RP   + + + SAC+H+GLV++G QY++ M +
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
              + P   H+ C+VD+ GR+G LQEA EFI+ +PI+P    WG++LSAC  + +  +GK
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGK 603

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             AE L  LEPEN G Y +L+N+Y A G+W++A +I K
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 179/706 (25%), Positives = 291/706 (41%), Gaps = 157/706 (22%)

Query: 74  TTLLIIVSALTQMNCLK-QGR----VVHCLSIKAGMIADSSLCNVFVNM----------- 117
           +TLL + + L Q +  K  GR    +VHC  IK+G++    L N  +N+           
Sbjct: 10  STLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHAR 69

Query: 118 --------------------YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
                               YAK GD++SS   F  +   D+VSW T++ G  +     K
Sbjct: 70  KLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHK 129

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +    EM   G +    +L++ +A+ A    L  GK +H+  +KLG   +  VSV+NSL
Sbjct: 130 AIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGN--VSVSNSL 187

Query: 218 ISMYSQCGDIEAAERAFWGMTCK-------------------------------DVVSWN 246
           ++MY++CGD   A+  F  M  K                               D+V+WN
Sbjct: 188 LNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I G+   G    A D+  +M     + PD  T+ +++S CA+   L  G  +H + + 
Sbjct: 248 SMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIV- 306

Query: 307 RLLGYDL--LMMNSLMDFYSKSNSLSKAELL-------------FNA-------IAPMN- 343
              G+D+  +++N+L+  YS+   +  A  L             F A       +  MN 
Sbjct: 307 -TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNE 365

Query: 344 -----------DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
                      D+V+W +MI G            LF+ M+    + +  TL A+L   +S
Sbjct: 366 AKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASS 425

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             SL  GK IH   +K G   +    NAL+ MY   G + +A      I    DT  W  
Sbjct: 426 LASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTS 485

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I+A  Q+GH +EA++ F++M   +   PD +T V V SAC +  L  +G+    +    
Sbjct: 486 MIIALAQHGHAEEALELFETML-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM---- 540

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
                                +K    +  +     L  + CM+  F +      A E  
Sbjct: 541 ---------------------MKDVDKIIPT-----LSHYACMVDLFGRAGLLQEAQEFI 574

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
             +  EP+ ++  S+LSAC     +  GK +      L   ENS   SAL ++YS C   
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVYKNIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKW 633

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEM----CNSGIRPTKSSV 658
            ++     SM        +G+  IE+ H++       GI P K+ +
Sbjct: 634 EEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEI 679



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 238/572 (41%), Gaps = 89/572 (15%)

Query: 1   RGFLAHLPTST-----SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV 55
           R     +P  T     ++L+AY+     +SS   F     +D V+W  MI          
Sbjct: 69  RKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYH 128

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
             +   GEM+ EGI     TL  +++++    CL+ G+ VH   +K G+  + S+ N  +
Sbjct: 129 KAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLL 188

Query: 116 NMYAKCGD-------------------------------LNSSECTFSGMHCADTVSWNT 144
           NMYAKCGD                               ++ +   F  M   D V+WN+
Sbjct: 189 NMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248

Query: 145 IMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++SG     Y  + L  F +M   S    D  +L+S ++A A L +L  G+ IH+  +  
Sbjct: 249 MISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTT 308

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAER------------------------------- 232
           G++ S    V N+LISMYS+CG +E A R                               
Sbjct: 309 GFDISGI--VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEA 366

Query: 233 --AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
              F  +  +DVV+W A+I G+  +G + EA +L   M +     P+  T+  ++S+ + 
Sbjct: 367 KNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSM-VGEEQRPNSYTLAAMLSVASS 425

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              L  G+ +HG A++    Y + + N+L+  Y+K+ S++ A   F+ I    D VSW S
Sbjct: 426 LASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTS 485

Query: 351 MISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MI              LF+ ML    +    T + +  +C     +  G+        + 
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545

Query: 399 FSNNTIGVNALM-HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
               T+   A M  ++   G L  A   ++++    D   W  ++ AC   +N    +  
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVA 605

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
                + + +N+   S  L N+ SACG  E A
Sbjct: 606 AERLLLLEPENSGAYS-ALANLYSACGKWEEA 636


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 240/448 (53%), Gaps = 40/448 (8%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++L +C+       GK IH + +K G  ++   VNALM MY  CG LV+A  L  ++S  
Sbjct: 114 SVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSER 173

Query: 433 SDTS---------------------CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
              S                      W  +I    +    +E  + F  M ++ N  P+ 
Sbjct: 174 DVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEE-NVFPND 232

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +T++++I +CG +     GK LH   L++  G+   +  AL+ MYG+C +I+SA  +F+S
Sbjct: 233 ITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDS 292

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
             N ++ TW  MISA++Q      A +LF  +      PNE+++VS+LS C   G L  G
Sbjct: 293 MKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMG 352

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K  H ++   G + +  + +AL+DMY+ C               +    W+ M++ YG H
Sbjct: 353 KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMH 412

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G G +A++LF EM   G++P   + I  L ACSH+GLV EG   +  M+ ++ + P+ EH
Sbjct: 413 GYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH 472

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+LGR+G L EAY+ I+++P+ P   +WGAML+AC  H ++ MG+  A  L  LE
Sbjct: 473 YGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALE 532

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P+N GY + +SN+Y A  RW D   + K
Sbjct: 533 PQNCGYKVLMSNIYAAANRWNDVAGMRK 560



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 207/424 (48%), Gaps = 39/424 (9%)

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            L+ +  M +  I  DS  +  ++ A +Q++  + G+ +H  S+K G+++D  + N  + 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSG--CLHNNYPEKCLLYFREM--GW----- 167
           MY++CG L S+   F  M   D VSW+T++     L   + ++ ++ +  M  G+     
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 168 --SGEQ-----------ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
              GE+            +++++ S + +   +G +  GK +HA  ++ G+  S  +++ 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMS--LALA 270

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            +L+ MY +CG+I +A   F  M  KDV++W A+I  +A     + AF L  +M+    V
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMR-DNGV 329

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            P+  T+V+L+SLCA +  L  G+  H Y  ++ +  D+++  +L+D Y+K   +S A+ 
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LF+  A   D+ +WN M++G            LF EM  L  + +  T +  L +C+   
Sbjct: 390 LFSE-AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAG 448

Query: 383 SLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +  GK +    +   G          ++ +    G L  A+ +++ +    + + W  +
Sbjct: 449 LVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAM 508

Query: 442 IVAC 445
           + AC
Sbjct: 509 LAAC 512



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 160/329 (48%), Gaps = 4/329 (1%)

Query: 27  LALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM 86
           + LFY    + +V+W AMI   +    +  G   F  M+EE +  +  T+L ++ +   +
Sbjct: 186 ITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFV 245

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
             ++ G+ +H   ++ G     +L    V+MY KCG++ S+   F  M   D ++W  ++
Sbjct: 246 GAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMI 305

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
           S     N  +     F +M  +G + + +++ S ++  A  G L  GK  HA   K G E
Sbjct: 306 SAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVE 365

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
               V +  +LI MY++CGDI  A+R F     +D+ +WN ++ G+ ++G  E+A  L  
Sbjct: 366 VD--VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFT 423

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSK 325
           EM+ +  V+P+  T +  +  C+ + L+ EG+ +    I    L   +     ++D   +
Sbjct: 424 EMETL-GVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGR 482

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +  L +A  +  ++    ++  W +M++ 
Sbjct: 483 AGLLDEAYKMIESMPVTPNIAIWGAMLAA 511



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 166/344 (48%), Gaps = 46/344 (13%)

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
           H + A+ T+  M ++ +   DS  + +V+ AC  + +A  GK +HG ++K+ +  D  V 
Sbjct: 89  HPRYALNTYTYM-RKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVV 147

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA-------FSQ------------- 549
           NAL+ MY  C  + SA  +F+     ++ +W+ MI A       FSQ             
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGY 207

Query: 550 ---NKAEVRALELFRHLEFE--PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
              N  E       R +E    PN+I+++S++ +C  +G ++ GK++H ++   GF  + 
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            +++AL+DMY  C               K    W++MISAY        A +LF +M ++
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G+RP + +++SLLS C+ +G +D G ++++  +++  V  +      ++DM  + G +  
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           A        I      W  M++    HG    G++  +L  ++E
Sbjct: 387 AQRLFSE-AIDRDICTWNVMMAGYGMHG---YGEKALKLFTEME 426



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 12/254 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +T+L+  Y       S+ A+F    NKDV+TW AMI+A  +  C+      F
Sbjct: 262 GFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M + G+R +  T++ ++S       L  G+  H    K G+  D  L    ++MYAKC
Sbjct: 322 VQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC 381

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD++ ++  FS     D  +WN +M+G   + Y EK L  F EM   G + ++++   A+
Sbjct: 382 GDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGAL 441

Query: 182 AASACLGELSYG-----KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            A +  G +  G     K+IH  G+       P V     ++ +  + G ++ A +    
Sbjct: 442 HACSHAGLVVEGKGLFEKMIHDFGL------VPKVEHYGCMVDLLGRAGLLDEAYKMIES 495

Query: 237 M-TCKDVVSWNAII 249
           M    ++  W A++
Sbjct: 496 MPVTPNIAIWGAML 509


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/435 (34%), Positives = 250/435 (57%), Gaps = 24/435 (5%)

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           +F  +T++A+LP+    + L+ G  I C  +K GF ++   +  L+ ++  CG++  A  
Sbjct: 28  RFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARL 87

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISACG 482
           L   I      SC N +I   T NG  +++++ FK +  + ++ +S   V L+ V S  G
Sbjct: 88  LFGEIRKKDLISC-NAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFG 146

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           +  L      +HG  +K  +   + V  AL T+Y R  ++  A  +F+      L +WN 
Sbjct: 147 HSYLC---NCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNA 203

Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           MIS  +QN     A+ LF+ ++     PN +++ SILSAC Q+G L  G+ +H  +    
Sbjct: 204 MISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNR 263

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           F+ N ++S+AL+DMY+ C               K+   W++MIS YG HG G EA++LF+
Sbjct: 264 FESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFY 323

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           +M +S ++PT  + +S+L ACSH+GLV EG   ++ M+ ++   P  EH+ C+VD+LGR+
Sbjct: 324 DMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRA 383

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G+L++A EFIK +P++P P VWGA+L AC  H DT +    +E LF+L+PEN+GYY+ +S
Sbjct: 384 GQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMS 443

Query: 765 NMYVALGRWKDAVEI 779
           N+Y    ++  A  +
Sbjct: 444 NIYSVERKYPQAASV 458



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 196/416 (47%), Gaps = 18/416 (4%)

Query: 44  MITACVENRCVVMGLHFFGEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA 102
           MI+  V+N C    +  FG+MV   G RFD TT++ ++ A+ ++  LK G  + CL+IK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 103 GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF 162
           G  +  SL    +++++KCG++  +   F  +   D +S N ++SG   N   E  +  F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 163 REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYS 222
           +E+  SGE+  + ++   +   +  G       IH   +KLG     + SV+ +L ++Y 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVS--HSSVSTALTTVYC 178

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           +  ++  A + F     K + SWNA+I G   NG  + A  L   MQ   +V P+  TV 
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQ-KNNVNPNPVTVT 237

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +++S CA    L  G  VH          ++ +  +L+D Y+K  S++ A  LF+ + P 
Sbjct: 238 SILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFD-LMPE 296

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            + V+WN+MISG            LF +ML    + +  T L++L +C+    ++ G  I
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356

Query: 391 -HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            H      GF         ++ +    G L  A   ++ +        W  ++ AC
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGAC 412



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 175/353 (49%), Gaps = 6/353 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +H+   T L++ +S     E +  LF E   KD+++ NAMI+    N      +  F
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++  G R  S+T++ ++   +          +H   +K G+++ SS+      +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            ++  +   F         SWN ++SGC  N   +  +  F+ M  +    + V+++S +
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A +G LS G+ +H+L     +E + YVS   +LI MY++CG I  A   F  M  K+
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVS--TALIDMYAKCGSITVARELFDLMPEKN 298

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+WNA+I G+ L+G  +EA  L ++M L  SV+P   T ++++  C+ + L++EG  + 
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDM-LSSSVKPTGLTFLSVLYACSHAGLVKEGDGIF 357

Query: 302 GYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            + +    G++ L  +   ++D   ++  L KA     A+        W +++
Sbjct: 358 -HTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 23/330 (6%)

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I    +N  F+++I+ F  M        D  T++ V+ A   L+    G  +  LA+K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
                  +   LI+++ +C +++ A  +F      +L + N MIS F+ N     ++ LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 561 RHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--- 614
           + L      +S   IV ++   +  G       IHG    LG   +S +S+AL  +Y   
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 615 ------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                       S  K+ A+W++MIS    +G    AI LF  M  + + P   +V S+L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC+  G +  G ++ +++++             ++DM  + G +  A E    +P +  
Sbjct: 241 SACAQIGALSLG-EWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMP-EKN 298

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
              W AM+S    HG    G++  +L + +
Sbjct: 299 EVTWNAMISGYGLHGH---GQEALKLFYDM 325


>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
 gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
          Length = 811

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 181/647 (27%), Positives = 320/647 (49%), Gaps = 54/647 (8%)

Query: 176 SLSSAVAASACLGE--LSYGKVIHA-------------LGIKLGYEDSPYVSVTNSLISM 220
           +L S+++A A LG   LS G+ +H              + + +  E+   V+   +L+ M
Sbjct: 12  NLVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVA--TALVDM 69

Query: 221 YSQCGDIEAAERAF--WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           YS+CG ++ A R F  + +  K +  W A++ G+AL+G   +A +L      + S  PD 
Sbjct: 70  YSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVSSEPPDT 129

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
             +++ I+ C+ +  L +GR++H     R L +   + N L++ Y +   L +A   F  
Sbjct: 130 VMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHRARKAFEK 189

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           I   N LVSWN +I              LF+ M          T L +L +C   E+   
Sbjct: 190 ITAKN-LVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVLDACGGVEAAGD 248

Query: 387 GKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            + IH  +L+L G   +    ++L++ Y  CG L  A  +   +    +T     ++ A 
Sbjct: 249 VRRIH-KKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLK-NTVTMTSMLAAY 306

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS--LMG 503
            Q+G  +EA++ ++ M + Q    D VT ++ + AC ++    +G+++H   L S  +  
Sbjct: 307 AQHGLGEEALEIYREM-ESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQ 365

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            D  +  AL+ MYGRC  + +A ++F+   + N  TWN ++ +++Q      AL L+  +
Sbjct: 366 PDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSM 425

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
           + +PN ++ +++L+AC+ +G L  G+  H  +   GF++   +  AL++MY  C      
Sbjct: 426 DAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDA 485

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K+   W+  + A  +HG+  E + LF EM   G+ P   ++++ L ACSHS
Sbjct: 486 LGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHS 545

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           G + EG  Y+ NM+++Y V P   H+ C+VD+L R+G L  A E I ++P +P    W  
Sbjct: 546 GKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTT 605

Query: 729 MLSACSHHGDT-KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +L+AC  H       K  A+   + EP N G Y +LS MY  +  ++
Sbjct: 606 LLAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYSGVRTYR 652



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 165/653 (25%), Positives = 298/653 (45%), Gaps = 63/653 (9%)

Query: 67  EGIRFDSTTLLIIVSALTQMNC--LKQGRVVH---C----------LSIKAGMIADSSLC 111
           EG+   ++ L+  +SA  ++    L QGR +H   C          +++      D  + 
Sbjct: 4   EGVPRSASNLVSSISACARLGSAFLSQGRELHERYCQWWRRGGGGEVAVAVAGEEDDLVA 63

Query: 112 NVFVNMYAKCGDLNSSECTFS--GMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWS 168
              V+MY+KCG L+ +   F    +       W  ++SG  LH +  +   LY R +  S
Sbjct: 64  TALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSVS 123

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
            E  D V L SA+ A +    L  G+ IHA       E   +  + N L++MY +C ++ 
Sbjct: 124 SEPPDTVMLLSAITACSSAEFLDDGRAIHAQ--ISSRELDHHTHLGNGLVNMYGRCKELH 181

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A +AF  +T K++VSWN II  +A  G    A +L   M     V  D  T + ++  C
Sbjct: 182 RARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMD-PEGVAADAVTFLHVLDAC 240

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
                  + R +H       L +D+ + +SL++ Y K   L++A+ +F+ + P+ + V+ 
Sbjct: 241 GGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTM-PLKNTVTM 299

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
            SM++             +++EM     +    T ++ L +C+S  +L  G++IH   L 
Sbjct: 300 TSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLV 359

Query: 397 LGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            G     + +   AL++MY  CG L AA SL   ++ + +T  WN ++ +  Q G+ +EA
Sbjct: 360 SGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMA-DKNTITWNALMGSYAQWGYGKEA 418

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           +  + SM    +A P+S+T + +++AC  +    +G++ H     +    +  V  AL+ 
Sbjct: 419 LNLYHSM----DAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVN 474

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEIS 571
           MYG+C  ++ A   F       + TW   + A + +      L LF  +E +   P+ ++
Sbjct: 475 MYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVA 534

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYG 631
           +++ L AC+  G L+ G+              S+ ++ + D Y    + A +  ++    
Sbjct: 535 LLAALFACSHSGKLKEGR--------------SYFTNMIQD-YGVSPTLAHYDCVVDLLC 579

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-SHSGLVDEGLQYYNNMLE 683
             G    A EL   M      P+  +  +LL+AC +HS L D+     +  LE
Sbjct: 580 RTGLLGRAEELIDSM---PFEPSAVTWTTLLAACRTHSTLYDKAKVAADKALE 629



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 154/631 (24%), Positives = 277/631 (43%), Gaps = 64/631 (10%)

Query: 10  STSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE- 66
           +T+L+  YS     + +  +F  Y   +K +  W AM++    +      L  +   +  
Sbjct: 63  ATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQALELYQRFLSV 122

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
                D+  LL  ++A +    L  GR +H       +   + L N  VNMY +C +L+ 
Sbjct: 123 SSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGRCKELHR 182

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +   + VSWN I+       +    +  F+ M   G  AD V+    +   AC
Sbjct: 183 ARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHVL--DAC 240

Query: 187 LGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
            G  + G V  IH      G E   +V+  +SL++ Y +CG +  A+R F  M  K+ V+
Sbjct: 241 GGVEAAGDVRRIHKKLELSGLEWDVFVA--SSLVNAYGKCGCLAEAKRVFDTMPLKNTVT 298

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
             +++  +A +G  EEA ++  EM+  +  + D  T ++ +  C+    L +GR++H   
Sbjct: 299 MTSMLAAYAQHGLGEEALEIYREME-SQGRKADRVTFISALDACSSIGALSQGRAIHS-- 355

Query: 305 IRRLL------GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
             RLL        D+++  +L++ Y +   L  A+ LF+ +A  N  ++WN+++      
Sbjct: 356 --RLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKN-TITWNALMGSYAQW 412

Query: 354 GLFKEMLYLC----SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT-IGVNA 408
           G  KE L L     +Q +  T LA+L +C++  +L  G++ H      GF     +GV A
Sbjct: 413 GYGKEALNLYHSMDAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGV-A 471

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L++MY  CG L  A     ++   +  + W + ++A   +G F+E ++ F  M +    +
Sbjct: 472 LVNMYGKCGSLEDALGTFAKLERKTVVT-WTVAMLALAHHGEFRETLRLFTEM-ELDGVA 529

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PDSV L+  + AC +     EG+S                   +I  YG           
Sbjct: 530 PDSVALLAALFACSHSGKLKEGRSYF---------------TNMIQDYG----------- 563

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                +  L  ++C++    +     RA EL   + FEP+ ++  ++L+AC     L   
Sbjct: 564 ----VSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVTWTTLLAACRTHSTLYDK 619

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKS 619
            ++           N+ I  AL  MYS  ++
Sbjct: 620 AKVAADKALETEPHNAGIYFALSYMYSGVRT 650



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 209/464 (45%), Gaps = 18/464 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           H      L+  Y        +   F +   K++V+WN +I A  +       +  F  M 
Sbjct: 163 HTHLGNGLVNMYGRCKELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMD 222

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG+  D+ T L ++ A   +      R +H     +G+  D  + +  VN Y KCG L 
Sbjct: 223 PEGVAADAVTFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLA 282

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            ++  F  M   +TV+  ++++    +   E+ L  +REM   G +AD V+  SA+ A +
Sbjct: 283 EAKRVFDTMPLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACS 342

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            +G LS G+ IH+  +  G    P V +  +L++MY +CG ++AA+  F GM  K+ ++W
Sbjct: 343 SIGALSQGRAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITW 402

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NA++  +A  G  +EA +L H M      +P+  T + +++ C+    L +GR+ H    
Sbjct: 403 NALMGSYAQWGYGKEALNLYHSMD----AQPNSLTFLAMLTACSTVGALLQGRAAHARLA 458

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN-SMIS----GLFKEML 360
                 ++ +  +L++ Y K  SL  A   F  +     +V+W  +M++    G F+E L
Sbjct: 459 PAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKL-ERKTVVTWTVAMLALAHHGEFRETL 517

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHM 412
            L ++            LLA L +C+    L+ G+S     ++  G S      + ++ +
Sbjct: 518 RLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDL 577

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
               G L  A  L+  +        W  ++ AC  +    +  K
Sbjct: 578 LCRTGLLGRAEELIDSMPFEPSAVTWTTLLAACRTHSTLYDKAK 621



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 12/155 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+  Y      E +L  F +   K VVTW   + A   +      L  F
Sbjct: 461 GFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLF 520

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC------NVFV 115
            EM  +G+  DS  LL  + A +    LK+GR     S    MI D  +       +  V
Sbjct: 521 TEMELDGVAPDSVALLAALFACSHSGKLKEGR-----SYFTNMIQDYGVSPTLAHYDCVV 575

Query: 116 NMYAKCGDLNSSECTFSGMHCADT-VSWNTIMSGC 149
           ++  + G L  +E     M    + V+W T+++ C
Sbjct: 576 DLLCRTGLLGRAEELIDSMPFEPSAVTWTTLLAAC 610


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 187/626 (29%), Positives = 322/626 (51%), Gaps = 44/626 (7%)

Query: 190 LSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           LSY  GK +HA  IK  ++   + S+ NS+++ Y +CG+++ A   F  M  +D VSWN 
Sbjct: 78  LSYIDGKCLHACLIKTAFDS--FTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNV 135

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G    G   E        ++    EP+I+T+V L+  C      +EG  +HGY I+ 
Sbjct: 136 LIHGCLDYGALVEGLWQFINARVA-GFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQS 194

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L     + NS +  Y+  + +  A +LF+ + P  D++SW++MI G            +
Sbjct: 195 GLWASWSVQNSFLCMYADVD-MDCARILFDEM-PEKDVISWSAMIGGYVQYLEDQIGLQI 252

Query: 356 FKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           F++ML   S+ +     L+++L +C +  ++  G+ +H   +  G  ++    N+L+ MY
Sbjct: 253 FQKMLS-TSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMY 311

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C D  +AF +   +   ++ S WN ++     N  + EA+    SM + +    D VT
Sbjct: 312 SKCKDAGSAFEVFSEMPRRNNVS-WNSLLSGLILNKKYSEALLLVYSM-RTEGIEADEVT 369

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           LVN +  C      +  K++H   ++     +  V N+LI  Y +C  I+ A  VF    
Sbjct: 370 LVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTR 429

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
             ++  W+ MI+ F+       A+ +F+ +      PN ++I+++L AC+    L+    
Sbjct: 430 RRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMW 489

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
            HG     G      + +A++DMYS C               K+   WS+MI+AYG +G 
Sbjct: 490 AHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGL 549

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             EA+ L  +M +  I+P   + +S+L+ACSH GLV+ GL  + +M++++ V PE EH+ 
Sbjct: 550 AHEALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYS 609

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           C+VDML R+GKL +A E I+ +P   + G  VWGA+LSAC  +  + +G++    + +LE
Sbjct: 610 CMVDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELE 669

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P N+  Y+  S+MY + G W +A  +
Sbjct: 670 PLNLAGYLLASSMYASDGLWDNAARM 695



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 166/590 (28%), Positives = 272/590 (46%), Gaps = 37/590 (6%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
            G+ +H   IK    + +S+ N  +N Y KCG+L+++   F  M   D+VSWN ++ GCL
Sbjct: 82  DGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCL 141

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 + L  F     +G + +  +L   V A   L     G  +H   I+ G   S  
Sbjct: 142 DYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWAS-- 199

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            SV NS + MY+   D++ A   F  M  KDV+SW+A+I G+    + +    +  +M  
Sbjct: 200 WSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLS 258

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
              + PD   +V+++  CA+S+ +  GR VHG  I R L  DL + NSL+D YSK     
Sbjct: 259 TSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAG 318

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSC 378
            A  +F+ + P  + VSWNS++SGL     + E L L              TL+  L  C
Sbjct: 319 SAFEVFSEM-PRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQIC 377

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                    K++HC  ++ G  +N I +N+L+  Y  C  +  A+ +  R +   D   W
Sbjct: 378 KYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSR-TRRRDVVLW 436

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           + +I      G   EAI  F+ M +     P++VT++N++ AC            HG A+
Sbjct: 437 STMIAGFAHCGKPDEAIAVFQKMNEGIEV-PNAVTIINLLQACSVSAELKRSMWAHGAAI 495

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +  +  +  V  A++ MY +C +I+++   F      N+ TW+ MI+A+  N     AL 
Sbjct: 496 RRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALA 555

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           L   +   E +PN ++ +S+L+AC+  G++  G  +   +      +  F          
Sbjct: 556 LLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEF---------- 605

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                  +S M+      GK  +A+EL   M  +  R   S   +LLSAC
Sbjct: 606 -----EHYSCMVDMLSRAGKLDDAMELIRMMPET-FRAGASVWGALLSAC 649



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 276/578 (47%), Gaps = 33/578 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S+L  Y      ++++++F    ++D V+WN +I  C++   +V GL  F      G   
Sbjct: 104 SILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEP 163

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           + +TL+++V A   +   ++G  +H   I++G+ A  S+ N F+ MYA   D++ +   F
Sbjct: 164 NISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADV-DMDCARILF 222

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGEL 190
             M   D +SW+ ++ G +     +  L  F++M   S    D V L S + A A    +
Sbjct: 223 DEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNI 282

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + G+++H L I  G +   +V   NSLI MYS+C D  +A   F  M  ++ VSWN+++ 
Sbjct: 283 TMGRLVHGLTICRGLDSDLFVK--NSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLS 340

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G  LN K+ EA  L++ M+    +E D  T+V  + +C         ++VH   IRR   
Sbjct: 341 GLILNKKYSEALLLVYSMR-TEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCE 399

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            + +++NSL+D Y+K N +  A  +F+      D+V W++MI+G            +F++
Sbjct: 400 SNEIVLNSLIDAYAKCNLIELAWEVFSR-TRRRDVVLWSTMIAGFAHCGKPDEAIAVFQK 458

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M       +  T++ +L +C+    L+     H   ++ G +       A++ MY  CG+
Sbjct: 459 MNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGE 518

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           + A+     +I   +  + W+ +I A   NG   EA+     M   +   P+++T ++V+
Sbjct: 519 IEASRKAFNQIPQKNIIT-WSTMIAAYGMNGLAHEALALLAQMKSHE-IKPNALTYLSVL 576

Query: 479 SACGNLELAFEGKSLHGLALKSLM---GLDTRVQN-----ALITMYGRCRDIKSASTVFE 530
           +AC +  L   G S+     KS++   G+D   ++      +++  G+  D      +  
Sbjct: 577 TACSHGGLVEMGLSV----FKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMP 632

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALE-LFRHLEFEP 567
             +      W  ++SA    ++     + +++ LE EP
Sbjct: 633 ETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEP 670



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 6/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A      S L  Y++V   + +  LF E   KDV++W+AMI   V+     +GL  F
Sbjct: 195 GLWASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIF 253

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M+    I  D   L+ ++ A      +  GR+VH L+I  G+ +D  + N  ++MY+K
Sbjct: 254 QKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSK 313

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C D  S+   FS M   + VSWN+++SG + N    + LL    M   G +AD V+L + 
Sbjct: 314 CKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNC 373

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +          + K +H   I+ G E +    V NSLI  Y++C  IE A   F     +
Sbjct: 374 LQICKYFAHPYHCKAVHCATIRRGCESNEI--VLNSLIDAYAKCNLIELAWEVFSRTRRR 431

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV W+ +I GFA  GK +EA  +  +M     V P+  T++ L+  C+ S  L+     
Sbjct: 432 DVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEV-PNAVTIINLLQACSVSAELKRSMWA 490

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           HG AIRR L  ++ +  +++D YSK   +  +   FN I P  ++++W++MI+ 
Sbjct: 491 HGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQI-PQKNIITWSTMIAA 543



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 21/309 (6%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + L    SL+  YS      S+  +F E   ++ V+WN++++  + N+     L  
Sbjct: 295 RGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLL 354

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLK---------QGRVVHCLSIKAGMIADSSLC 111
              M  EGI  D  TL+         NCL+           + VHC +I+ G  ++  + 
Sbjct: 355 VYSMRTEGIEADEVTLV---------NCLQICKYFAHPYHCKAVHCATIRRGCESNEIVL 405

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  ++ YAKC  +  +   FS     D V W+T+++G  H   P++ +  F++M    E 
Sbjct: 406 NSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEV 465

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V++ + + A +   EL      H   I+ G   +  V+V  +++ MYS+CG+IEA+ 
Sbjct: 466 PNAVTIINLLQACSVSAELKRSMWAHGAAIRRGL--AAEVAVGTAIVDMYSKCGEIEASR 523

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           +AF  +  K++++W+ +I  + +NG   EA  LL +M+    ++P+  T +++++ C+  
Sbjct: 524 KAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMK-SHEIKPNALTYLSVLTACSHG 582

Query: 292 LLLREGRSV 300
            L+  G SV
Sbjct: 583 GLVEMGLSV 591



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 14/158 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  A +   T+++  YS     E+S   F +   K+++TW+ MI A   N      L  
Sbjct: 497 RGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALAL 556

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF------ 114
             +M    I+ ++ T L +++A     C   G V   LS+   MI D  +   F      
Sbjct: 557 LAQMKSHEIKPNALTYLSVLTA-----CSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCM 611

Query: 115 VNMYAKCGDLNSSECTFSGM---HCADTVSWNTIMSGC 149
           V+M ++ G L+ +      M     A    W  ++S C
Sbjct: 612 VDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSAC 649


>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 190/672 (28%), Positives = 332/672 (49%), Gaps = 75/672 (11%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           + D+ +LS+ +A  A   ++++G  +H   I+ G +  P+V+  N+++S+Y++  D  + 
Sbjct: 57  KPDHYNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVA--NTVLSLYAKIEDFVSL 114

Query: 231 ERAFWGMTCKDVVSW-------------------------------NAIIDGFALNGKFE 259
           +R F  +   DV SW                               NA+I G A +G   
Sbjct: 115 KRGFQEIEKPDVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDW 174

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
            A +  +EM  M  V+PD  +   ++SLC   +    GR VH   I+        ++N+L
Sbjct: 175 VAMNTFYEMHKM-GVKPDNYSFACILSLCTKEIE-DLGRQVHSSVIKAGYLRKTSVVNAL 232

Query: 320 MDFYSKSNSLSKAELLFNAI-APMNDLVSWNSMISGL------------FKEMLYLCSQF 366
           +  Y    +L  A  +F    + + D +++N MI GL            FK+M   C   
Sbjct: 233 ITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSP 292

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +  T ++I+ SC+    ++  + +H   +KLGF + T+  N+ + MY +CG+  AA ++ 
Sbjct: 293 TELTFVSIMSSCSI---IQVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVF 349

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           Q +    D   WN +I +  Q    + A+  F  M Q+    PD  T  +++     +E+
Sbjct: 350 QMLIEK-DLISWNAIISSYVQGNFGKSAVLAFLQM-QRTGIGPDEFTFGSLLGVSEFIEI 407

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
               + +H    K+ + L   + NAL++ Y +CR +K +  VF    + N+ +WN +I  
Sbjct: 408 V---EMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYG 464

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           F  N   ++ALE F  L   + +P+  ++  +LS C  +  L  GKQIHG++   G    
Sbjct: 465 FLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSE 524

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           + + + L+ MYS C               +   +W+S+ISAY  HG+G EA++ F  M +
Sbjct: 525 TSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQD 584

Query: 649 -SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
              I P +++  ++LSACSH+GLV+E  Q  + ML +Y   P  +   CIVD++GRSG +
Sbjct: 585 MPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYI 644

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            +A   I++        VW A+ SAC+ H + ++G+ VA +L + E +N   Y+ LSN+Y
Sbjct: 645 DQAESVIESAQYGEHTHVWWALFSACAAHENLRLGRIVARILLEKERDNPSVYVVLSNIY 704

Query: 768 VALGRWKDAVEI 779
            + G W++A  +
Sbjct: 705 ASAGCWEEAANV 716



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 270/555 (48%), Gaps = 34/555 (6%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL+A + + + E +  +F      +V  WNAMIT   E+    + ++ F EM + G++
Sbjct: 130 TTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVK 189

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D+ +   I+S  T+      GR VH   IKAG +  +S+ N  + MY    +L  +   
Sbjct: 190 PDNYSFACILSLCTK-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEV 248

Query: 131 FSGM--HCADTVSWNTIMSG--CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           F G      D +++N ++ G  C+  N  E+ L+ F++M  +      ++  S +++ + 
Sbjct: 249 FEGTESEVRDQITYNVMIDGLVCVRRN--EEALIMFKDMKRACLSPTELTFVSIMSSCSI 306

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
              +   + +H+  IKLG+E   +  V NS I+MY+ CG+ +AA   F  +  KD++SWN
Sbjct: 307 ---IQVAQQVHSQAIKLGFES--FTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWN 361

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           AII  + + G F ++  +L  +Q+ R+ + PD  T  +L+ +   S  +     VH Y  
Sbjct: 362 AIISSY-VQGNFGKS-AVLAFLQMQRTGIGPDEFTFGSLLGV---SEFIEIVEMVHAYVY 416

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
           +  L   + ++N+L+  Y+K   + ++  +F+ I   N ++SWN++I G     L L + 
Sbjct: 417 KNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKN-IISWNTVIYGFLLNGLPLQAL 475

Query: 366 FSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             FS            TL  +L  C +  +L+ GK IH + L+ G S+ T   N L+ MY
Sbjct: 476 EHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMY 535

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  +      +    D   WN +I A  Q+G  +EA+  FK+M    +  PD  T
Sbjct: 536 SKCGLLGWSLRTFN-VMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQAT 594

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-NALITMYGRCRDIKSASTVFESC 532
              ++SAC +  L  E   +  + L     + +  Q + ++ + GR   I  A +V ES 
Sbjct: 595 FTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESA 654

Query: 533 -YNCNLCTWNCMISA 546
            Y  +   W  + SA
Sbjct: 655 QYGEHTHVWWALFSA 669



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 156/625 (24%), Positives = 274/625 (43%), Gaps = 77/625 (12%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE---GIRFDSTTLLIIVS 81
           +SL    E+ ++D++ +N ++     +   +  L  F ++       I+ D   L   ++
Sbjct: 9   NSLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLA 68

Query: 82  ALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
                  +  G  +H  +I++G+     + N  +++YAK  D  S +  F  +   D  S
Sbjct: 69  VCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYS 128

Query: 142 WNTIMSGCL---HNNYPEK----------------------------CLLYFREMGWSGE 170
           W T++S C    H  Y  +                             +  F EM   G 
Sbjct: 129 WTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGV 188

Query: 171 QADNVSLSSAVAASACLGEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           + DN S   A   S C  E+   G+ +H+  IK GY      SV N+LI+MY    ++E 
Sbjct: 189 KPDNYSF--ACILSLCTKEIEDLGRQVHSSVIKAGYLRK--TSVVNALITMYFSIENLED 244

Query: 230 AERAFWGM--TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           A   F G     +D +++N +IDG     + EEA  +  +M+    + P   T V+++S 
Sbjct: 245 AYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMK-RACLSPTELTFVSIMSS 303

Query: 288 CADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           C+   +++  + VH  AI+  LG++   L+ NS +  Y+       A  +F  +    DL
Sbjct: 304 CS---IIQVAQQVHSQAIK--LGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIE-KDL 357

Query: 346 VSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNS---PESLEFG------------KSI 390
           +SWN++IS       Y+   F  S +LA L    +   P+   FG            + +
Sbjct: 358 ISWNAIISS------YVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMV 411

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H +  K G       +NAL+  Y  C  +  +  +   I+  +  S WN VI     NG 
Sbjct: 412 HAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIIS-WNTVIYGFLLNGL 470

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
             +A++ F  +   +   P + TL  V+S C N+     GK +HG  L+S    +T + N
Sbjct: 471 PLQALEHFSKLIMSK-LKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCN 529

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FE 566
            LITMY +C  +  +   F      ++ +WN +ISA++Q+     A++ F+ ++      
Sbjct: 530 GLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIM 589

Query: 567 PNEISIVSILSACTQLGVLRHGKQI 591
           P++ +  +ILSAC+  G++    QI
Sbjct: 590 PDQATFTTILSACSHAGLVEEACQI 614



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 9/298 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +      S +T Y++   F+++ A+F     KD+++WNA+I++ V+       +  F
Sbjct: 321 GFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAF 380

Query: 62  GEMVEEGIRFDSTTL--LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +M   GI  D  T   L+ VS   ++       +VH    K G+I    + N  V+ YA
Sbjct: 381 LQMQRTGIGPDEFTFGSLLGVSEFIEI-----VEMVHAYVYKNGLILIIEILNALVSAYA 435

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC  +  S   FS ++  + +SWNT++ G L N  P + L +F ++  S  +    +LS 
Sbjct: 436 KCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSI 495

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++  A +  L  GK IH   ++ G  +S   S+ N LI+MYS+CG +  + R F  M  
Sbjct: 496 VLSICANISTLDIGKQIHGYILRSG--NSSETSLCNGLITMYSKCGLLGWSLRTFNVMIE 553

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +D+VSWN+II  +A +G+ +EA D    MQ M S+ PD AT  T++S C+ + L+ E 
Sbjct: 554 RDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEA 611



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 177/355 (49%), Gaps = 12/355 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           G+L       +L+T Y ++   E +  +F   E+  +D +T+N MI   V  R     L 
Sbjct: 221 GYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALI 280

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F +M    +   S T L  VS ++  + ++  + VH  +IK G  + + + N  + MY 
Sbjct: 281 MFKDMKRACL---SPTELTFVSIMSSCSIIQVAQQVHSQAIKLGFESFTLVGNSTITMYT 337

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            CG+  ++   F  +   D +SWN I+S  +  N+ +  +L F +M  +G   D  +  S
Sbjct: 338 SCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGS 397

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +  S  +  +   +++HA   K G      + + N+L+S Y++C  ++ + + F  +  
Sbjct: 398 LLGVSEFIEIV---EMVHAYVYKNGL--ILIIEILNALVSAYAKCRKVKQSLQVFSEINS 452

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K+++SWN +I GF LNG   +A +   ++ +M  ++P   T+  ++S+CA+   L  G+ 
Sbjct: 453 KNIISWNTVIYGFLLNGLPLQALEHFSKL-IMSKLKPSTFTLSIVLSICANISTLDIGKQ 511

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +HGY +R     +  + N L+  YSK   L  +   FN +    D+VSWNS+IS 
Sbjct: 512 IHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIE-RDIVSWNSIISA 565



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 117/232 (50%), Gaps = 4/232 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  +    +L++AY+     + SL +F E  +K++++WN +I   + N   +  L  F
Sbjct: 419 GLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHF 478

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++   ++  + TL I++S    ++ L  G+ +H   +++G  +++SLCN  + MY+KC
Sbjct: 479 SKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKC 538

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSA 180
           G L  S  TF+ M   D VSWN+I+S    +   ++ +  F+ M        D  + ++ 
Sbjct: 539 GLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTI 598

Query: 181 VAASACLGELSYGKVIHALGIKL-GYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           ++A +  G +   +    L I L  Y   P V   + ++ +  + G I+ AE
Sbjct: 599 LSACSHAGLVE--EACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAE 648



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 123/291 (42%), Gaps = 56/291 (19%)

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--NASPDSVTLVNVISACGNL-EL 486
           S + D   +N ++    ++  + ++++ F  +      N  PD   L   ++ C N  ++
Sbjct: 17  SASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRDI 76

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD------------------------- 521
           AF G  LHG A++S +     V N ++++Y +  D                         
Sbjct: 77  AF-GSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSA 135

Query: 522 ------IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISI 572
                 I+ AS +F+     N+  WN MI+  +++  +  A+  F  +     +P+  S 
Sbjct: 136 CTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSF 195

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY-----------------S 615
             ILS CT+  +   G+Q+H  V   G+   + + +AL+ MY                 S
Sbjct: 196 ACILSLCTK-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTES 254

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
             +    ++ MI       +  EA+ +F +M  + + PT+ + +S++S+CS
Sbjct: 255 EVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCS 305



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/243 (19%), Positives = 98/243 (40%), Gaps = 55/243 (22%)

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE------FEPNEISIVSI 575
           + S  T+ ES    +L  +N +++   ++   + +L+LF  +        +P+  ++ + 
Sbjct: 8   MNSLKTIAESASQ-DLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTT 66

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------------ 617
           L+ C     +  G Q+HG+    G +    +++ +L +Y+                    
Sbjct: 67  LAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDV 126

Query: 618 ---------------------------KSNAA-WSSMISAYGYHGKGWEAIELFHEMCNS 649
                                      K N A W++MI+     G  W A+  F+EM   
Sbjct: 127 YSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKM 186

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G++P   S   +LS C+   + D G Q ++++++   +R +T     ++ M      L++
Sbjct: 187 GVKPDNYSFACILSLCTKE-IEDLGRQVHSSVIKAGYLR-KTSVVNALITMYFSIENLED 244

Query: 710 AYE 712
           AYE
Sbjct: 245 AYE 247


>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 179/572 (31%), Positives = 294/572 (51%), Gaps = 36/572 (6%)

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW + I       + E A  L  +M LM    P+  TV+++I   +   L    R +
Sbjct: 53  NVISWTSKISSLVKQNQSELAVGLF-KMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVI 111

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
            G  I+     ++ +  +L+ FYS  + +     +FN   P+ DLV W++M+S       
Sbjct: 112 CGSVIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQ-TPIKDLVLWSAMVSACVKSGQ 169

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 +F+ M Y   + +  ++++ILP+C +  +L FGK IH + +K  F   T   N+
Sbjct: 170 YGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNS 229

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  C +  A+  +  +I    D   W  +I  C +N   +EA K F  M Q     
Sbjct: 230 LVDMYAKCRNFKASMLVFDQILEK-DLISWTTIIRGCIENDCPREAFKAFSRM-QFSCFG 287

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D   + ++I A    +    G + HG  LK+ +     +  AL+ MY +  +++SA  V
Sbjct: 288 ADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIV 347

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           F+     +  +W+ MIS  + ++    ALE F+ ++     PNEI+ VS+L AC+ +G  
Sbjct: 348 FDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQ 407

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMISAY 630
             G+ I  H    G+  N+F+SSAL+D+Y                  K    WSSMI+ Y
Sbjct: 408 ELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGY 467

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G +G G EA+E F  M   G++P +   IS+LSACSH GL  EG   +++M ++Y + P+
Sbjct: 468 GLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPK 527

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC-SHHGDTKMGKQVAELL 749
             H+ C+VD++ R G ++ A +F+  +P++P   +WGA+L+ C S HG  ++ + VAE L
Sbjct: 528 LPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERL 587

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             L+P+N  YY+ LSN+Y   GRW D   + K
Sbjct: 588 IGLDPQNTSYYVILSNLYAEQGRWGDVERLRK 619



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 210/462 (45%), Gaps = 28/462 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  +T+L+  YS+         +F +T  KD+V W+AM++ACV++         F
Sbjct: 119 GFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIF 177

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  +  +++ I+ A   +  L  G+ +H  SIK      +++ N  V+MYAKC
Sbjct: 178 RAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKC 237

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +  +S   F  +   D +SW TI+ GC+ N+ P +    F  M +S   AD   +   +
Sbjct: 238 RNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLI 297

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A     E  +G   H   +K G     +VS+  +L+ MY++ G++E+A   F  +  KD
Sbjct: 298 VAIIQADEHKFGIAFHGFLLKNGL--LAFVSIGTALLQMYAKFGELESAIIVFDQLNKKD 355

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRS 299
            +SW+A+I   +++      ++ L   + M+S +  P+  T V+L+  C+       G S
Sbjct: 356 YISWSAMI---SVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGES 412

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +  +A +     +  + ++L+D Y K   +++   +FN I P  DLV W+SMI+G     
Sbjct: 413 IQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI-PTKDLVCWSSMINGY---G 468

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSI----HC------W------QLKLGFSNNT 403
           L  C   +  T   +L     P  + F   +    HC      W      + K G     
Sbjct: 469 LNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKL 528

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                ++ +    G++  A   + ++    D   W  ++  C
Sbjct: 529 PHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGC 570


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 183/619 (29%), Positives = 304/619 (49%), Gaps = 84/619 (13%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WN +I      G   + F L  +M+ +    PD  T   +   CA+   L  G S+H
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSL-GWTPDHYTFPFVFKACANLSSLSLGASLH 282

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI--APMNDLVSWNSMISG----- 354
               R     ++ + N+++  Y K  +L  A  +F+ +    + DLVSWNS++S      
Sbjct: 283 ATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWAS 342

Query: 355 -------LFKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                  LF +M   +L S    S L+ ILP+C S  +   G+ +H + ++ G  ++   
Sbjct: 343 DANTALALFHKMTTRHLMSPDVIS-LVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA++ MY  CG +  A  + QR+    D   WN ++   +Q G  + A+  F+ MT++ 
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460

Query: 466 ----------------------------------NASPDSVTLVNVISACGNLELAFEGK 491
                                              + P+ VTLV+++SAC ++     GK
Sbjct: 461 IELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGK 520

Query: 492 SLHGLALKSLMGLD--------TRVQNALITMYGRCRDIKSASTVFESC--YNCNLCTWN 541
             H  A+K ++ LD         +V N LI MY +C+  + A  +F+S    + ++ TW 
Sbjct: 521 ETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWT 580

Query: 542 CMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
            MI  ++Q+     AL+LF  +       +PN+ ++   L AC +L  LR G+Q+H +V 
Sbjct: 581 VMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVL 640

Query: 597 HLGFQENS-FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              +     F+++ L+DMYS                 ++  +W+S+++ YG HG+G +A+
Sbjct: 641 RNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDAL 700

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            +F EM    + P   + + +L ACSHSG+VD G+ ++N M +++ V P  EH+ C+VD+
Sbjct: 701 RVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDL 760

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
            GR+G+L EA + I  +P++P P VW A+LSAC  H + ++G+  A  L +LE  N G Y
Sbjct: 761 WGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSY 820

Query: 761 ISLSNMYVALGRWKDAVEI 779
             LSN+Y    RWKD   I
Sbjct: 821 TLLSNIYANARRWKDVARI 839



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 166/684 (24%), Positives = 294/684 (42%), Gaps = 93/684 (13%)

Query: 70  RFDSTTLL----IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           +F +T LL    I ++AL + N L   +++H  SI  G++    L    +  Y       
Sbjct: 151 QFTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLF--HLATNLIGTYIASNSTA 208

Query: 126 SSECTFSGMHCADTVS--WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
            +      +  + +    WN ++   LH   P      +R+M   G   D+ +      A
Sbjct: 209 YAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKA 268

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TCK 240
            A L  LS G  +HA   + G+  +  V V N+++SMY +CG +  A   F  +     +
Sbjct: 269 CANLSSLSLGASLHATVSRSGFASN--VFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQ 326

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWN+++  +        A  L H+M     + PD+ ++V ++  CA       GR V
Sbjct: 327 DLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQV 386

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           HG++IR  L  D+ + N+++D Y+K   + +A  +F  +    D+VSWN+M++G      
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMK-FKDVVSWNAMVTGYSQAGR 445

Query: 355 -----------------------------------------LFKEMLYLCSQFSFSTLLA 373
                                                    +F++M    S+ +  TL++
Sbjct: 446 LEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVS 505

Query: 374 ILPSCNSPESLEFGKSIHCWQLK--LGFSNNTIG------VNALMHMYINCGDLVAAFSL 425
           +L +C S  +L  GK  HC+ +K  L       G      +N L+ MY  C     A  +
Sbjct: 506 LLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565

Query: 426 LQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGN 483
              +S  + D   W ++I    Q+G    A++ F  M +  ++  P+  TL   + AC  
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625

Query: 484 LELAFEGKSLHGLALKSLMG-LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
           L     G+ +H   L++  G +   V N LI MY +  D+ +A  VF++    N  +W  
Sbjct: 626 LAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTS 685

Query: 543 MISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +++ +  +     AL +F   R +   P+ I+ + +L AC+  G++ HG           
Sbjct: 686 LMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGI---------- 735

Query: 600 FQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
               +F +    D +        ++ M+  +G  G+  EA++L +EM    + PT    +
Sbjct: 736 ----NFFNRMSKD-FGVDPGPEHYACMVDLWGRAGRLGEAMKLINEM---PMEPTPVVWV 787

Query: 660 SLLSACSHSGLVDEGLQYYNNMLE 683
           +LLSAC     V+ G    N +LE
Sbjct: 788 ALLSACRLHSNVELGEFAANRLLE 811



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 157/643 (24%), Positives = 268/643 (41%), Gaps = 100/643 (15%)

Query: 1   RGFLAHLPTSTSLLTAY--SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           +G L HL  +T+L+  Y  SN + +   L          V  WN +I   +         
Sbjct: 187 QGLLFHL--ATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVF 244

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             + +M   G   D  T   +  A   ++ L  G  +H    ++G  ++  +CN  V+MY
Sbjct: 245 TLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMY 304

Query: 119 AKCGDLNSSECTFSGM---HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADN 174
            KCG L  +   F  +      D VSWN+++S  +  +     L  F +M        D 
Sbjct: 305 GKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDV 364

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           +SL + + A A L     G+ +H   I+ G  D  +V   N+++ MY++CG +E A + F
Sbjct: 365 ISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVG--NAVVDMYAKCGKMEEANKVF 422

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM-------------------------- 268
             M  KDVVSWNA++ G++  G+ E A  L   M                          
Sbjct: 423 QRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGC 482

Query: 269 ---QLMRSV-----EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--------D 312
               + R +      P++ T+V+L+S C     L  G+  H YAI+ +L          D
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------------LFKEM 359
           L ++N L+D Y+K  S   A  +F++++P + D+V+W  MI G            LF  M
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602

Query: 360 LYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINC 416
             +      +  TL   L +C    +L FG+ +H + L+  + +  + V N L+ MY   
Sbjct: 603 FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKS 662

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           GD+  A  +   +   +  S W  ++     +G  ++A++ F  M ++    PD +T + 
Sbjct: 663 GDVDTAQIVFDNMPQRNAVS-WTSLMTGYGMHGRGEDALRVFDEM-RKVPLVPDGITFLV 720

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ AC +      G   HG+   + M  D  V                         +  
Sbjct: 721 VLYACSH-----SGMVDHGINFFNRMSKDFGV-------------------------DPG 750

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
              + CM+  + +      A++L   +  EP  +  V++LSAC
Sbjct: 751 PEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSAC 793



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 226/531 (42%), Gaps = 83/531 (15%)

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAP-MNDLVSWNSMIS------------GLFKEMLY 361
           +  +L+  Y  SNS + A LL   + P  + +  WN +I              L+++M  
Sbjct: 193 LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKS 252

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
           L       T   +  +C +  SL  G S+H    + GF++N    NA++ MY  CG L  
Sbjct: 253 LGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRH 312

Query: 422 AFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
           A ++   + H    D   WN V+ A         A+  F  MT +   SPD ++LVN++ 
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILP 372

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC +L  +  G+ +HG +++S +  D  V NA++ MY +C  ++ A+ VF+     ++ +
Sbjct: 373 ACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVS 432

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFE--------------------------------- 566
           WN M++ +SQ      AL LF  +  E                                 
Sbjct: 433 WNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMC 492

Query: 567 -----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ--------ENSFISSALLDM 613
                PN +++VS+LSAC  +G L HGK+ H +               ++  + + L+DM
Sbjct: 493 DCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDM 552

Query: 614 YSNCKSN-----------------AAWSSMISAYGYHGKGWEAIELFHEM--CNSGIRPT 654
           Y+ C+S                    W+ MI  Y  HG    A++LF  M   +  I+P 
Sbjct: 553 YAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPN 612

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
             ++   L AC+    +  G Q +  +L  +          C++DM  +SG +  A    
Sbjct: 613 DFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVF 672

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISL 763
            N+P Q     W ++++    HG  +   +V + + K  L P+ + + + L
Sbjct: 673 DNMP-QRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 205/489 (41%), Gaps = 89/489 (18%)

Query: 362 LCSQFSFSTLL--AILP-----SCNSPESLEFGKSIHCWQLKLGF----SNNTIGVNALM 410
           L SQF+ + LL  A +P      CNS   L   K +H   +  G     + N IG     
Sbjct: 148 LQSQFTNTRLLSCATIPITALKECNS---LAHAKLLHQQSIMQGLLFHLATNLIGT---- 200

Query: 411 HMYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
             YI       A  LL+R+  + S    WN +I      G  ++    ++ M +    +P
Sbjct: 201 --YIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQM-KSLGWTP 257

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T   V  AC NL     G SLH    +S    +  V NA+++MYG+C  ++ A  +F
Sbjct: 258 DHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMF 317

Query: 530 ES-CYNC--NLCTWNCMISAFSQNKAEVRALELF-----RHLEFEPNEISIVSILSACTQ 581
           +  C+    +L +WN ++SA+        AL LF     RHL   P+ IS+V+IL AC  
Sbjct: 318 DDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL-MSPDVISLVNILPACAS 376

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-------------------NA- 621
           L     G+Q+HG     G  ++ F+ +A++DMY+ C                     NA 
Sbjct: 377 LAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAM 436

Query: 622 ------------------------------AWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
                                          W+++I+ Y   G+G EA+++F +MC+ G 
Sbjct: 437 VTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGS 496

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYY----NNMLEEYDVRPETEHHVCI---VDMLGRS 704
           RP   +++SLLSAC   G +  G + +      +L      P  +    I   +DM  + 
Sbjct: 497 RPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKC 556

Query: 705 GKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
              + A +   ++  + +  V W  M+   + HGD     Q+   +FK++        +L
Sbjct: 557 QSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTL 616

Query: 764 SNMYVALGR 772
           S   VA  R
Sbjct: 617 SCALVACAR 625


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 159/482 (32%), Positives = 261/482 (54%), Gaps = 44/482 (9%)

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LFN      D+ SWNS+I+ L            F  M  L  + + ST    + SC++  
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK  H   L  GF ++    +AL+ MY  CG L  A  L   I   +  + W  +I
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVT-WTSLI 155

Query: 443 VACTQNGHFQEAIKTFKSMT--------QQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
               QN    EA+  FK           ++   S DSV +++V+SAC  +      + +H
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215

Query: 495 GLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           G+A+K  +GLD    V+N L+  Y +C ++  +  VF+     ++ +WN MI+ ++QN  
Sbjct: 216 GVAIK--VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGL 273

Query: 553 EVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
              A E+F  +      + NE+++ ++L AC   G LR G  +H  V  +G+  N  +++
Sbjct: 274 STDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMAT 333

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +++DMY  C               K+  +W++MI+ YG HG   EA+++F++M  +G++P
Sbjct: 334 SIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKP 393

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + IS+L+ACSH+G ++EG +++N M  EY+V P  EH+ C+VD+LGR+G ++EAY  
Sbjct: 394 NYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNL 453

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           IK++ ++    +WG++L+AC  H D ++ +  A  LFKL+P N GYY+ L+N+Y   GRW
Sbjct: 454 IKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRW 513

Query: 774 KD 775
           KD
Sbjct: 514 KD 515



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 188/387 (48%), Gaps = 14/387 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + L  S++L+  YS      ++  LF E   +++VTW ++IT  V+N      L  F
Sbjct: 112 GFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVF 171

Query: 62  GEMV---------EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN 112
            E +         E G   DS  ++ ++SA ++++       VH ++IK G+     + N
Sbjct: 172 KEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVEN 231

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQ 171
             ++ YAKCG+++ S   F  M   D VSWN++++    N         F  M    G +
Sbjct: 232 TLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGK 291

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+LS+ + A A  G L  G  +H   IK+GY ++  V +  S+I MY +CG  E A 
Sbjct: 292 YNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN--VIMATSIIDMYCKCGQAEMAR 349

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
            AF GM  K+V SW A+I G+ ++G   EA D+ ++M +   V+P+  T +++++ C+ +
Sbjct: 350 NAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM-IWAGVKPNYITFISVLAACSHA 408

Query: 292 LLLREG-RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
             L EG R  +  +    +   +     ++D   ++  + +A  L  ++    D V W S
Sbjct: 409 GFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGS 468

Query: 351 MISGLFKEMLYLCSQFSFSTLLAILPS 377
           +++          ++ S   L  + PS
Sbjct: 469 LLAACRIHKDVELAEISARELFKLDPS 495



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 223/465 (47%), Gaps = 49/465 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+T+L T ++   YF+ +          DV +WN++I            L  F  M +  
Sbjct: 30  TNTNLTTLFNK--YFDRT----------DVYSWNSLIAELARGGDSCESLRAFSWMRKLD 77

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ + +T    + + + +  L  G+  H  ++  G  +D  + +  ++MY+KCG L+++ 
Sbjct: 78  IKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNAR 137

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS---------GEQADNVSLSS 179
             F  +   + V+W ++++G + N+   + L+ F+E  +          G   D+V++ S
Sbjct: 138 VLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMIS 197

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A + +   +  + +H + IK+G +    + V N+L+  Y++CG++  + + F  M  
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLD--KVMGVENTLLDAYAKCGEVSLSRKVFDDMAE 255

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDVVSWN++I  +A NG   +AF++ H M      + +  T+ TL+  CA    LR G  
Sbjct: 256 KDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMC 315

Query: 300 VHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +H   I+  +GY  +++M  S++D Y K      A   F+ +   N + SW +MI+G   
Sbjct: 316 LHDQVIK--MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKN-VRSWTAMIAGYGM 372

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFS 400
                    +F +M++   + ++ T +++L +C+    LE     F    H + ++ G  
Sbjct: 373 HGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVE 432

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           +    V+ L       G +  A++L++ +    D   W  ++ AC
Sbjct: 433 HYGCMVDLLG----RAGYIKEAYNLIKSMKVRRDFVLWGSLLAAC 473


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 179/599 (29%), Positives = 303/599 (50%), Gaps = 41/599 (6%)

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+  Y++ GD+  A R F GM  ++  +WNA+I G    G+F EA ++   M    SV  
Sbjct: 94  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 153

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLG----YDLLMMNSLMDFYSKSNSLSKA 332
           D  T   +I  CA    + +GR V       +       ++ +  +L+D ++K   L +A
Sbjct: 154 DGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEA 213

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA--ILPSC 378
             +F ++  + DL +W +MI G            LF  M      F   +L+A  ++ +C
Sbjct: 214 RNVFESMQ-VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR--SEGFGVDSLIAATVISAC 270

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                L+ G ++H   +K G S +    NAL+ MY  CG +  A  L    +++ D   W
Sbjct: 271 GRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWS-TNSKDVVSW 329

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           + +IV  +QNG    ++  F  M      +P+S TL +++     L+L   GK +H  ++
Sbjct: 330 SSLIVGYSQNGMHNVSVSLFCEMISL-GINPNSSTLASILPCLSVLKLIRSGKEIHCFSI 388

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVR 555
           +  +     V +ALI +Y +   I+ A T+F    + +L  WN M++ ++ N    +   
Sbjct: 389 RHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFC 448

Query: 556 ALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           AL L + +  +P+ +++VS+L  C Q  +L  GK++H +V          +++ALLDMY 
Sbjct: 449 ALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYC 508

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               ++   ++ +IS++G H    +A+  F  M   GI P K + ++
Sbjct: 509 KCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVA 568

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LLS CSH+GL+D+GL  Y++ML +Y++ PE EH+ CIVD+  R GKL EA+ F+ N+  +
Sbjct: 569 LLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEE 628

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P+  V G +L+AC  H    + + V + +F+  P + GY+I LSN+Y   G W D   I
Sbjct: 629 PEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRI 687



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 276/560 (49%), Gaps = 28/560 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            ++ R +H   +  G    + L    V  YAK GD+  +   F GM   ++ +WN ++ G
Sbjct: 69  FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKG 128

Query: 149 CLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLGELSYG-KVIHALGIKLGYE 206
            +      + L  F  M   G  A D  +    + A A LG ++ G KV   +   +   
Sbjct: 129 LVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASG 188

Query: 207 DS-PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           ++ P V V  +L+ M+++CG ++ A   F  M  +D+ +W A+I G   +G + E  DL 
Sbjct: 189 NARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLF 248

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           + M+       D     T+IS C  +  L+ G ++HG A++     D+ + N+L+D Y K
Sbjct: 249 NHMR-SEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCK 307

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              +  A+ LF +     D+VSW+S+I G            LF EM+ L    + STL +
Sbjct: 308 CGCVEMADCLFWSTNS-KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLAS 366

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           ILP  +  + +  GK IHC+ ++ G   +   V+AL+ +Y   G +  A ++   ++ + 
Sbjct: 367 ILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW-LTLDK 425

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D + WN ++     NG+   A    + + Q+    PD VT+V+V+  C    +  +GK L
Sbjct: 426 DLAIWNSMVAGYAVNGYSDSAFCALR-LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKEL 484

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H   +K  +     V NAL+ MY +C  ++ A  VF+     N  T+N +IS+F ++  E
Sbjct: 485 HAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHE 544

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG---HVFHLGFQENSFIS 607
            +AL  F  ++ +   P++++ V++LS C+  G++  G  ++    H +++  ++  +  
Sbjct: 545 DQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY-- 602

Query: 608 SALLDMYSNC-KSNAAWSSM 626
           S ++D+YS C K + AW  M
Sbjct: 603 SCIVDLYSRCGKLDEAWCFM 622



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 259/532 (48%), Gaps = 26/532 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IRF 71
           L+ AY+ +     +L +F     ++   WNA+I   V+       L  F  MV +G +  
Sbjct: 94  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 153

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF-----VNMYAKCGDLNS 126
           D  T   ++ A   +  + QGR V  + ++  + + ++  NVF     V+M+AKCG L+ 
Sbjct: 154 DGFTYPPVIKACAALGAVAQGRKVWEM-VETDIASGNARPNVFVQCALVDMFAKCGCLDE 212

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D  +W  ++ G +H+    + +  F  M   G   D++  ++ ++A   
Sbjct: 213 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGR 272

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            GEL  G  +H   +K G     YVS  N+L+ MY +CG +E A+  FW    KDVVSW+
Sbjct: 273 AGELQVGTALHGCAVKSGASGDIYVS--NALVDMYCKCGCVEMADCLFWSTNSKDVVSWS 330

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I G++ NG    +  L  EM +   + P+ +T+ +++   +   L+R G+ +H ++IR
Sbjct: 331 SLIVGYSQNGMHNVSVSLFCEM-ISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIR 389

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
             L     ++++L+D YSK   +  AE +F  +    DL  WNSM++G            
Sbjct: 390 HGLERSEFVVSALIDLYSKQGLIRVAETIF-WLTLDKDLAIWNSMVAGYAVNGYSDSAFC 448

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             + +  +  +    T++++LP CN    L  GK +H + +K   ++     NAL+ MY 
Sbjct: 449 ALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYC 508

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  + Q ++   +T  +NI+I +  ++ H  +A+  F  M ++   +PD VT 
Sbjct: 509 KCGFLEVAKEVFQLMTER-NTVTYNILISSFGKHNHEDQALSFFDLM-KRDGIAPDKVTF 566

Query: 475 VNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           V ++S C +  L  +G  L H +     +  +    + ++ +Y RC  +  A
Sbjct: 567 VALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 618



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 222/484 (45%), Gaps = 21/484 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  ++     + +  +F     +D+  W AMI   V +   +  +  F  M  EG   
Sbjct: 199 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGV 258

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS     ++SA  +   L+ G  +H  ++K+G   D  + N  V+MY KCG +  ++C F
Sbjct: 259 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 318

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
              +  D VSW++++ G   N      +  F EM   G   ++ +L+S +   + L  + 
Sbjct: 319 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 378

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH   I+ G E S +  V ++LI +YS+ G I  AE  FW    KD+  WN+++ G
Sbjct: 379 SGKEIHCFSIRHGLERSEF--VVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAG 436

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A+NG  + AF  L  +Q +  ++PD  TVV+++ LC    +L +G+ +H Y I+  +  
Sbjct: 437 YAVNGYSDSAFCALRLLQKV-GLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINS 495

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
              + N+L+D Y K   L  A+ +F  +   N  V++N +IS  F +  +     SF  L
Sbjct: 496 VCSVNNALLDMYCKCGFLEVAKEVFQLMTERNT-VTYNILISS-FGKHNHEDQALSFFDL 553

Query: 372 L---AILP---------SCNSPESLEFGKSIHCWQLKL---GFSNNTIGVNALMHMYINC 416
           +    I P         SC S   L   K +H +   L     S      + ++ +Y  C
Sbjct: 554 MKRDGIAPDKVTFVALLSCCSHAGL-IDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRC 612

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A+  +  ++   +      ++ AC  +     A    K + +Q    P    L++
Sbjct: 613 GKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLS 672

Query: 477 VISA 480
            I A
Sbjct: 673 NIYA 676



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 12/329 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S +L+  Y      E +  LF+ T +KDVV+W+++I    +N    + +  F EM+  G
Sbjct: 297 VSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG 356

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  +S+TL  I+  L+ +  ++ G+ +HC SI+ G+     + +  +++Y+K G +  +E
Sbjct: 357 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 416

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      D   WN++++G   N Y +      R +   G + D+V++ S +       
Sbjct: 417 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 476

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK +HA  IK  Y  +   SV N+L+ MY +CG +E A+  F  MT ++ V++N +
Sbjct: 477 MLIQGKELHAYVIK--YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNIL 534

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGY 303
           I  F  +   ++A      M+    + PD  T V L+S C+ + L+ +G       +H Y
Sbjct: 535 ISSFGKHNHEDQALSFFDLMK-RDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDY 593

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            I      +    + ++D YS+   L +A
Sbjct: 594 NISP----EKEHYSCIVDLYSRCGKLDEA 618


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 179/599 (29%), Positives = 303/599 (50%), Gaps = 41/599 (6%)

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+  Y++ GD+  A R F GM  ++  +WNA+I G    G+F EA ++   M    SV  
Sbjct: 89  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 148

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLG----YDLLMMNSLMDFYSKSNSLSKA 332
           D  T   +I  CA    + +GR V       +       ++ +  +L+D ++K   L +A
Sbjct: 149 DGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEA 208

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA--ILPSC 378
             +F ++  + DL +W +MI G            LF  M      F   +L+A  ++ +C
Sbjct: 209 RNVFESMQ-VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR--SEGFGVDSLIAATVISAC 265

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                L+ G ++H   +K G S +    NAL+ MY  CG +  A  L    +++ D   W
Sbjct: 266 GRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWS-TNSKDVVSW 324

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           + +IV  +QNG    ++  F  M      +P+S TL +++     L+L   GK +H  ++
Sbjct: 325 SSLIVGYSQNGMHNVSVSLFCEMISL-GINPNSSTLASILPCLSVLKLIRSGKEIHCFSI 383

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVR 555
           +  +     V +ALI +Y +   I+ A T+F    + +L  WN M++ ++ N    +   
Sbjct: 384 RHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFC 443

Query: 556 ALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           AL L + +  +P+ +++VS+L  C Q  +L  GK++H +V          +++ALLDMY 
Sbjct: 444 ALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYC 503

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               ++   ++ +IS++G H    +A+  F  M   GI P K + ++
Sbjct: 504 KCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVA 563

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           LLS CSH+GL+D+GL  Y++ML +Y++ PE EH+ CIVD+  R GKL EA+ F+ N+  +
Sbjct: 564 LLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEE 623

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           P+  V G +L+AC  H    + + V + +F+  P + GY+I LSN+Y   G W D   I
Sbjct: 624 PEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRI 682



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 275/561 (49%), Gaps = 30/561 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            ++ R +H   +  G    + L    V  YAK GD+  +   F GM   ++ +WN ++ G
Sbjct: 64  FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKG 123

Query: 149 CLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLGELSYGKVIHAL---GIKLG 204
            +      + L  F  M   G  A D  +    + A A LG ++ G+ +  +    I  G
Sbjct: 124 LVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASG 183

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
               P V V  +L+ M+++CG ++ A   F  M  +D+ +W A+I G   +G + E  DL
Sbjct: 184 -NARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDL 242

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            + M+       D     T+IS C  +  L+ G ++HG A++     D+ + N+L+D Y 
Sbjct: 243 FNHMR-SEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYC 301

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K   +  A+ LF +     D+VSW+S+I G            LF EM+ L    + STL 
Sbjct: 302 KCGCVEMADCLFWSTNS-KDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLA 360

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +ILP  +  + +  GK IHC+ ++ G   +   V+AL+ +Y   G +  A ++   ++ +
Sbjct: 361 SILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW-LTLD 419

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D + WN ++     NG+   A    + + Q+    PD VT+V+V+  C    +  +GK 
Sbjct: 420 KDLAIWNSMVAGYAVNGYSDSAFCALR-LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKE 478

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           LH   +K  +     V NAL+ MY +C  ++ A  VF+     N  T+N +IS+F ++  
Sbjct: 479 LHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNH 538

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG---HVFHLGFQENSFI 606
           E +AL  F  ++ +   P++++ V++LS C+  G++  G  ++    H +++  ++  + 
Sbjct: 539 EDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY- 597

Query: 607 SSALLDMYSNC-KSNAAWSSM 626
            S ++D+YS C K + AW  M
Sbjct: 598 -SCIVDLYSRCGKLDEAWCFM 617



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 260/532 (48%), Gaps = 26/532 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG-IRF 71
           L+ AY+ +     +L +F     ++   WNA+I   V+       L  F  MV +G +  
Sbjct: 89  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 148

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF-----VNMYAKCGDLNS 126
           D  T   ++ A   +  + QGR V  + ++A + + ++  NVF     V+M+AKCG L+ 
Sbjct: 149 DGFTYPPVIKACAALGAVAQGRKVWEM-VEADIASGNARPNVFVQCALVDMFAKCGCLDE 207

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D  +W  ++ G +H+    + +  F  M   G   D++  ++ ++A   
Sbjct: 208 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGR 267

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            GEL  G  +H   +K G     YVS  N+L+ MY +CG +E A+  FW    KDVVSW+
Sbjct: 268 AGELQVGTALHGCAVKSGASGDIYVS--NALVDMYCKCGCVEMADCLFWSTNSKDVVSWS 325

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I G++ NG    +  L  EM +   + P+ +T+ +++   +   L+R G+ +H ++IR
Sbjct: 326 SLIVGYSQNGMHNVSVSLFCEM-ISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIR 384

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----------- 355
             L     ++++L+D YSK   +  AE +F  +    DL  WNSM++G            
Sbjct: 385 HGLERSEFVVSALIDLYSKQGLIRVAETIF-WLTLDKDLAIWNSMVAGYAVNGYSDSAFC 443

Query: 356 -FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             + +  +  +    T++++LP CN    L  GK +H + +K   ++     NAL+ MY 
Sbjct: 444 ALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYC 503

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  + Q ++   +T  +NI+I +  ++ H  +A+  F  M ++   +PD VT 
Sbjct: 504 KCGFLEVAKEVFQLMTER-NTVTYNILISSFGKHNHEDQALSFFDLM-KRDGIAPDKVTF 561

Query: 475 VNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           V ++S C +  L  +G  L H +     +  +    + ++ +Y RC  +  A
Sbjct: 562 VALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 613



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 222/484 (45%), Gaps = 21/484 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  ++     + +  +F     +D+  W AMI   V +   +  +  F  M  EG   
Sbjct: 194 ALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGV 253

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DS     ++SA  +   L+ G  +H  ++K+G   D  + N  V+MY KCG +  ++C F
Sbjct: 254 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 313

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
              +  D VSW++++ G   N      +  F EM   G   ++ +L+S +   + L  + 
Sbjct: 314 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 373

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK IH   I+ G E S +  V ++LI +YS+ G I  AE  FW    KD+  WN+++ G
Sbjct: 374 SGKEIHCFSIRHGLERSEF--VVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAG 431

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A+NG  + AF  L  +Q +  ++PD  TVV+++ LC    +L +G+ +H Y I+  +  
Sbjct: 432 YAVNGYSDSAFCALRLLQKV-GLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINS 490

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
              + N+L+D Y K   L  A+ +F  +   N  V++N +IS  F +  +     SF  L
Sbjct: 491 VCSVNNALLDMYCKCGFLEVAKEVFQLMTERNT-VTYNILISS-FGKHNHEDQALSFFDL 548

Query: 372 L---AILP---------SCNSPESLEFGKSIHCWQLKL---GFSNNTIGVNALMHMYINC 416
           +    I P         SC S   L   K +H +   L     S      + ++ +Y  C
Sbjct: 549 MKRDGIAPDKVTFVALLSCCSHAGL-IDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRC 607

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G L  A+  +  ++   +      ++ AC  +     A    K + +Q    P    L++
Sbjct: 608 GKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLS 667

Query: 477 VISA 480
            I A
Sbjct: 668 NIYA 671



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 162/329 (49%), Gaps = 12/329 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S +L+  Y      E +  LF+ T +KDVV+W+++I    +N    + +  F EM+  G
Sbjct: 292 VSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG 351

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I  +S+TL  I+  L+ +  ++ G+ +HC SI+ G+     + +  +++Y+K G +  +E
Sbjct: 352 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 411

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F      D   WN++++G   N Y +      R +   G + D+V++ S +       
Sbjct: 412 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 471

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK +HA  IK  Y  +   SV N+L+ MY +CG +E A+  F  MT ++ V++N +
Sbjct: 472 MLIQGKELHAYVIK--YCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNIL 529

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGY 303
           I  F  +   ++A      M+    + PD  T V L+S C+ + L+ +G       +H Y
Sbjct: 530 ISSFGKHNHEDQALSFFDLMK-RDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDY 588

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            I      +    + ++D YS+   L +A
Sbjct: 589 NISP----EKEHYSCIVDLYSRCGKLDEA 613


>gi|302767656|ref|XP_002967248.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
 gi|300165239|gb|EFJ31847.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
          Length = 672

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 195/682 (28%), Positives = 333/682 (48%), Gaps = 44/682 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+QG+ +H    K G   ++ L N+ V+MY KCG L  +E  F  +   +  +W   M+ 
Sbjct: 1   LEQGKTIHDQMSKDGYSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTA 60

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N  P + +  F+ M   G + D V+ ++AV A + LG+L  G+ +H+      ++  
Sbjct: 61  FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSD 120

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + V  SLI+MY++ G+   AE  F  +  K  V++ A+I  ++      EA  L   M
Sbjct: 121 AVLRV--SLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAM 178

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   V PD   +++ +  CA      +GR++H   I      D  + ++L+  Y +   
Sbjct: 179 HL-EGVAPDKVAMLSALGACASE---PDGRAIHACIICCGSDGDDTVASALVSMYGRFQM 234

Query: 329 LSKAE-LLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAIL 375
           L  A+ + F+   P + +  WNSMIS     G  +E L L  +           T++ IL
Sbjct: 235 LESAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEIL 294

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-D 434
             C+    L+  + IH  QL+     +T  V++L+++Y  C  L  A ++ +  +  + D
Sbjct: 295 GVCSVLRKLDKARMIHA-QLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARD 353

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I A  + G    A+K F ++       P  VT V V+ A  +L     G SLH
Sbjct: 354 CIAWNTMIAAYAECGDPGMALKLF-TLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLH 412

Query: 495 GLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
              ++S  GLD    V N+L+  YG C  + SA+ VF S    +  +WN ++  ++Q+  
Sbjct: 413 H-RIRSC-GLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGC 470

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL +F  +E E    N I++ ++++ACT  G    GK IH  V  +G + +S + SA
Sbjct: 471 CDTALVVFHGMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSA 530

Query: 610 LLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+ MY                + K+  AW++++S +   G+  E +EL   M   G+   
Sbjct: 531 LVAMYGKFGMLDRAMSCFNDISAKNTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESD 590

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
            +S + +L ACSH GLV+E L  ++N++E+  V    EH+ C++D+L R+G L  A +  
Sbjct: 591 SASYLVVLFACSHGGLVEEALSCFSNLVEDGSVAANDEHYGCLIDLLARAGWLDRAEDLF 650

Query: 715 KNLPIQPKPGVWGAMLSACSHH 736
           +++P +P    W +++ AC  H
Sbjct: 651 RSMPFEPDSTSWMSLVGACKLH 672



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 158/593 (26%), Positives = 274/593 (46%), Gaps = 31/593 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y        + A F+    +++ TW   +TA  +N      +H F  M  +G+  D
Sbjct: 26  LVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELD 85

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                  V A + +  L  GR +H     +   +D+ L    +NMYAK G+   +E  F 
Sbjct: 86  RVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEELFQ 145

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +     V++  +++         + L  +R M   G   D V++ SA+   AC  E   
Sbjct: 146 RLELKSAVAYTALIAAYSQFKMGREALGLYRAMHLEGVAPDKVAMLSALG--ACASEPD- 202

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIID 250
           G+ IHA  I  G +     +V ++L+SMY +   +E+A+  F+        V  WN++I 
Sbjct: 203 GRAIHACIICCGSDGDD--TVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMIS 260

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  +G   EA +L  +M+L   V PD+ T+V ++ +C+    L + R +H   +R  + 
Sbjct: 261 AYVQSGHHREALELFEKMEL-EGVAPDVVTIVEILGVCSVLRKLDKARMIHAQ-LRARVD 318

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG------------LFK 357
            D  +++SL++ Y +  SL  A  +F   A    D ++WN+MI+             LF 
Sbjct: 319 ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLFT 378

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + +  T +A+L + +S  +L  G S+H      G        N+LM  Y +CG
Sbjct: 379 LMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCG 438

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L +A ++   +    + S WN ++   TQ+G    A+  F  M + +    + +TL NV
Sbjct: 439 RLSSATAVFHSLERRDEVS-WNTIMGLYTQHGCCDTALVVFHGM-ELEGVRANVITLTNV 496

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESCYNC 535
           ++AC     A +GKS+H   L   MGL+  + V +AL+ MYG+   +  A + F      
Sbjct: 497 VTACTVTGDAAKGKSIHARVLS--MGLEHHSAVGSALVAMYGKFGMLDRAMSCFNDISAK 554

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           N   WN ++S F+Q    V  +EL R ++    E +  S + +L AC+  G++
Sbjct: 555 NTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESDSASYLVVLFACSHGGLV 607



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 6/344 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           SLL  Y      E ++ +F E     +D + WN MI A  E     M L  F  M   G+
Sbjct: 326 SLLNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLFTLMDLHGV 385

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
                T + ++ A + +  L +G  +H      G+     + N  +  Y  CG L+S+  
Sbjct: 386 EPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCGRLSSATA 445

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   D VSWNTIM     +   +  L+ F  M   G +A+ ++L++ V A    G+
Sbjct: 446 VFHSLERRDEVSWNTIMGLYTQHGCCDTALVVFHGMELEGVRANVITLTNVVTACTVTGD 505

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            + GK IHA  + +G E   + +V ++L++MY + G ++ A   F  ++ K+ V+WNA++
Sbjct: 506 AAKGKSIHARVLSMGLEH--HSAVGSALVAMYGKFGMLDRAMSCFNDISAKNTVAWNALM 563

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-L 308
            GFA  G+  E  +L   MQL + +E D A+ + ++  C+   L+ E  S     +    
Sbjct: 564 SGFAQQGQSVETVELSRAMQL-QGMESDSASYLVVLFACSHGGLVEEALSCFSNLVEDGS 622

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +  +      L+D  +++  L +AE LF ++    D  SW S++
Sbjct: 623 VAANDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLV 666



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 13/253 (5%)

Query: 4   LAHLP-TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L  LP  S SL+  Y +     S+ A+F+    +D V+WN ++    ++ C    L  F 
Sbjct: 420 LDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALVVFH 479

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M  EG+R +  TL  +V+A T      +G+ +H   +  G+   S++ +  V MY K G
Sbjct: 480 GMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMYGKFG 539

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F+ +   +TV+WN +MSG        + +   R M   G ++D  S S  V 
Sbjct: 540 MLDRAMSCFNDISAKNTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESD--SASYLVV 597

Query: 183 ASACLGELSYGKVI-HALGIKLGYEDSPYVSVTNS----LISMYSQCGDIEAAERAFWGM 237
             AC    S+G ++  AL       +   V+  +     LI + ++ G ++ AE  F  M
Sbjct: 598 LFAC----SHGGLVEEALSCFSNLVEDGSVAANDEHYGCLIDLLARAGWLDRAEDLFRSM 653

Query: 238 TCK-DVVSWNAII 249
             + D  SW +++
Sbjct: 654 PFEPDSTSWMSLV 666



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H    ++L+  Y      + +++ F +   K+ V WNA+++   +    V  +   
Sbjct: 520 GLEHHSAVGSALVAMYGKFGMLDRAMSCFNDISAKNTVAWNALMSGFAQQGQSVETVELS 579

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC------NVFV 115
             M  +G+  DS + L+++ A     C   G V   LS  + ++ D S+          +
Sbjct: 580 RAMQLQGMESDSASYLVVLFA-----CSHGGLVEEALSCFSNLVEDGSVAANDEHYGCLI 634

Query: 116 NMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           ++ A+ G L+ +E  F  M    D+ SW +++  C
Sbjct: 635 DLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGAC 669


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 172/552 (31%), Positives = 280/552 (50%), Gaps = 73/552 (13%)

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----S 353
            +H   I   L + ++    L+  Y+     + +  +F   +P N++  WNS+I     +
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 354 GLFKEMLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           GLF E L L S       Q    T  +++ +C      E  KSIH   L +GF ++    
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-------IKTFK 459
           NAL+ MY    DL  A  + + +    D   WN +I     NG++ EA       IK F 
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212

Query: 460 SMTQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
            M  Q    PD +T+ +++ ACG+L +L F GK +H   + S    DT   N LI MY +
Sbjct: 213 EMVNQ--FKPDLLTITSILQACGHLGDLEF-GKYVHDYMITSGYECDTTASNILINMYAK 269

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE-------------- 564
           C ++ ++  VF      +  +WN MI+ + QN     +L++F +++              
Sbjct: 270 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASC 329

Query: 565 --------------------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                                 P+  +++SIL  C+ L   R GK+IHG +F LG + + 
Sbjct: 330 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 389

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            + + L++MYS C               K    W+++ISA G +G+G +A+  F EM  +
Sbjct: 390 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 449

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           GI P   + ++++ ACSHSGLV+EGL Y++ M ++Y + P  EH+ C+VD+L RS  L +
Sbjct: 450 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 509

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           A +FI ++P++P   +WGA+LSAC   GDT++ ++V+E + +L P++ GYY+ +SN+Y A
Sbjct: 510 AEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAA 569

Query: 770 LGRWKDAVEIGK 781
           LG+W     I K
Sbjct: 570 LGKWDQVRSIRK 581



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 245/529 (46%), Gaps = 62/529 (11%)

Query: 10  STSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           S  L+  Y++     SS ++F   + + +V  WN++I A   N      L  + E     
Sbjct: 51  SAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIR 110

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D+ T   +++A   +   +  + +H   +  G  +D  + N  ++MY +  DL+ + 
Sbjct: 111 LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKAR 170

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGE-----QADNVSLSSAVA 182
             F  M   D VSWN+++SG   N Y  + L +Y++ +    E     + D ++++S + 
Sbjct: 171 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQ 230

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A   LG+L +GK +H   I  GYE     + +N LI+MY++CG++ A++  F GM CKD 
Sbjct: 231 ACGHLGDLEFGKYVHDYMITSGYECD--TTASNILINMYAKCGNLLASQEVFSGMKCKDS 288

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQL----------------------------MRS- 273
           VSWN++I+ +  NGK  ++  +   M+                             MR+ 
Sbjct: 289 VSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTE 348

Query: 274 -VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            V PD+AT+++++ +C+     R+G+ +HG   +  L  D+ + N L++ YSK  SL  +
Sbjct: 349 GVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNS 408

Query: 333 ELLFNAIAPMNDLVSWNSMIS--GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
             +F  +    D+V+W ++IS  G++ E       F       I+P   +  ++ F  S 
Sbjct: 409 FQVFK-LMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS- 466

Query: 391 HCWQLKLGFS-----NNTIGVNALMHMYINCGDLVAAFSLLQR-------ISHNSDTSCW 438
           H   ++ G +          +   +  Y    DL++  +LL +       +    D+S W
Sbjct: 467 HSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIW 526

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VTLVNVISACGN 483
             ++ AC  +G  + A +  + + +    +PD     V + N+ +A G 
Sbjct: 527 GALLSACRMSGDTEIAERVSERIIE---LNPDDTGYYVLVSNIYAALGK 572



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 178/400 (44%), Gaps = 59/400 (14%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-------RCV 54
           GF + L    +L+  Y   +  + +  +F E   +DVV+WN++I+    N          
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204

Query: 55  VMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
              +  F EMV +  + D  T+  I+ A   +  L+ G+ VH   I +G   D++  N+ 
Sbjct: 205 YQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 263

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVS-------------------------------WN 143
           +NMYAKCG+L +S+  FSGM C D+VS                               WN
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323

Query: 144 TIMSGCLHNNYPEKCLLYFR---EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           TI++ C+H+   E C L  R    M   G   D  ++ S +   + L     GK IH   
Sbjct: 324 TIIASCVHS---EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI 380

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            KLG E    V V N LI MYS+CG +  + + F  M  KDVV+W A+I    + G+ ++
Sbjct: 381 FKLGLESD--VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKK 438

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGYAIR-RLLGYDLL 314
           A     EM+    + PD    V +I  C+ S L+ EG     R    Y I  R+  Y   
Sbjct: 439 AVRAFGEME-AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY--- 494

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
               ++D  S+S  L KAE    ++    D   W +++S 
Sbjct: 495 --ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 532


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/578 (29%), Positives = 299/578 (51%), Gaps = 34/578 (5%)

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  M  ++ VS+  +I G+A + KF EAF+L   +      E +     T++ L      
Sbjct: 3   FDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLH-GEGHELNPFVFTTVLKLLVSMEW 61

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
              GR VHG  ++   G +  +  +L+D YS S  +S A  +F+ I+   D+VSW  MI+
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISS-KDMVSWTGMIA 120

Query: 354 GL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                  F E L   SQ   +       T   +L +C   ++ + GK++HC  LK  +  
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +      L+ +Y  CGD   A+     +  N D   W+ +I    Q+G  ++A++ F  M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKN-DVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            ++    P+  T  +V+ A  ++E     K++HG ALK+ +  D  V NAL+  Y +C  
Sbjct: 240 -RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
           I+ +  +FE+  + N  +WN +I ++ Q     RAL LF ++   + +  E++  SIL A
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C  L  L  G Q+H       + ++  + +AL+DMY+ C               +   +W
Sbjct: 359 CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSW 418

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +++I  Y  HG G EAI++F+ M  +  +P + + + +LSACS++G +DEG QY+ +M +
Sbjct: 419 NAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
           +Y + P  EH+ C+V ++GRSG L +A +FI+++P +P   +W A+L AC  H D ++G+
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             A+ + +LEP +   ++ LSN+Y    RW +   + K
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRK 576



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 264/557 (47%), Gaps = 23/557 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F E   ++ V++  +I    ++   +     F  +  EG   +      ++  L  M  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            + GR+VH   +K G  +++ +    ++ Y+  G ++ +   F  +   D VSW  +++ 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N+   + L +F +M  +G + +N + +  + A   L     GK +H   +K  YE  
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            YV V   L+ +Y++CGD + A RAF  M   DV+ W+ +I  FA +G+ E+A ++  +M
Sbjct: 182 LYVGV--GLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    V P+  T  +++   AD   L   +++HG+A++  L  D+ + N+LM  Y+K   
Sbjct: 240 R-RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
           + ++  LF A++  ND VSWN++I              LF  ML    Q +  T  +IL 
Sbjct: 299 IEQSMELFEALSDRND-VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  +LE G  +HC   K  +  +    NAL+ MY  CG +  A  +   +      S
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I   + +G   EAIK F  M ++    PD +T V V+SAC N     EGK  +  
Sbjct: 418 -WNAIICGYSMHGLGVEAIKMFNLM-KETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFT 474

Query: 497 ALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA-FSQNKA 552
           ++K   G++  +++   ++ + GR  ++  A    E   +  ++  W  ++ A    N  
Sbjct: 475 SMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDV 534

Query: 553 EVRALELFRHLEFEPNE 569
           E+  +   R LE EP +
Sbjct: 535 ELGRISAQRVLELEPRD 551



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 206/464 (44%), Gaps = 29/464 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ ++    T+L+ AYS       +  +F E  +KD+V+W  MI +  EN C    L FF
Sbjct: 76  GYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFF 135

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G + ++ T   ++ A   +     G+ VHC  +K     D  +    + +Y +C
Sbjct: 136 SQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRC 195

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD + +   F  M   D + W+ ++S    +   EK L  F +M  +    +  + SS +
Sbjct: 196 GDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVL 255

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ASA +  L   K IH   +K G     +VS  N+L++ Y++CG IE +   F  ++ ++
Sbjct: 256 QASADIESLDLSKTIHGHALKAGLSTDVFVS--NALMACYAKCGCIEQSMELFEALSDRN 313

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VSWN II  +   G  E A  L   M L   V+    T  +++  CA    L  G  VH
Sbjct: 314 DVSWNTIIVSYVQLGDGERALSLFSNM-LRYQVQATEVTYSSILRACATLAALELGLQVH 372

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
               + + G D+ + N+L+D Y+K  S+  A  +F+ +  + D VSWN++I G       
Sbjct: 373 CLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML-DLRDKVSWNAIICGYSMHGLG 431

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                +F  M     +    T + +L +C++   L+ GK  +   +K  +     G+   
Sbjct: 432 VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ-YFTSMKQDY-----GIEPC 485

Query: 410 MHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           M  Y          G+L  A   ++ I        W  ++ AC 
Sbjct: 486 MEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACV 529


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/468 (34%), Positives = 261/468 (55%), Gaps = 24/468 (5%)

Query: 335 LFNAIAPMNDLVSWNSMISGL--FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           L+NAI       S N  I GL  +K+ML         T+  +L +C    ++  G+ +H 
Sbjct: 91  LYNAII-RGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHG 149

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K+G +++    N LM MY  C D++ +   +   S   D   W  +I    + G  +
Sbjct: 150 QAIKMGLASDVYVSNTLMRMYAVC-DVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAR 208

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNA 511
           E +  F  M  + N   D +TLV V+S+C  L     G+ LH   ++ S + LD  V NA
Sbjct: 209 EGVGLFFEMCGE-NLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNA 267

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPN 568
           L+ MY +C D   A  VF+     N+ +WN MIS  +Q      +L +FR ++    +P+
Sbjct: 268 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 327

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--NAAW--- 623
           ++++V++L++C  LGVL  GK +H ++     + + FI +AL+DMY+ C S   A W   
Sbjct: 328 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQ 387

Query: 624 ----------SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
                     ++MI     HG+G +A++LF EM   GI P + + + +L+ACSH GLV+E
Sbjct: 388 AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G +Y+ +M   Y++RP+ EH+ C+VD+LGR+G + EA EFI+N+PI+P   V GA+L AC
Sbjct: 448 GRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGAC 507

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             HG  ++G+ V + + K+EP   G Y+ +SN+Y +  RW+DA+++ K
Sbjct: 508 KIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRK 555



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 203/400 (50%), Gaps = 18/400 (4%)

Query: 5   AHLPTSTSL--LTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFF 61
           A L  ST L  L A S       +L+L  +    ++  +NA+I      N   + GL  +
Sbjct: 54  AQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVY 113

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ +GI  D+ T+  ++ A  +   +++G  VH  +IK G+ +D  + N  + MYA C
Sbjct: 114 KQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVC 173

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             + S+   F      D VSW T++ G +   +  + +  F EM     QAD ++L   +
Sbjct: 174 DVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVL 233

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           ++ A LG+L  G+ +H   I+     +  V V N+L+ MY +CGD   A + F  M  K+
Sbjct: 234 SSCARLGDLRLGRKLHRYIIR-NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKN 292

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSWN++I G A  G+F+E+  +  +MQ +  V+PD  T+V +++ CA+  +L  G+ VH
Sbjct: 293 VVSWNSMISGLAQKGQFKESLYMFRKMQRL-GVKPDDVTLVAVLNSCANLGVLELGKWVH 351

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y  R  +  D  + N+L+D Y+K  S+ +A  +F A+    D+ S+ +MI G       
Sbjct: 352 AYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMN-RKDVYSYTAMIVGLAMHGQG 410

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
                LF EM  +  +    T + +L +C+    +E G+ 
Sbjct: 411 GKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 450



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 159/303 (52%), Gaps = 12/303 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  S +L+  Y+      S+  +F  +  +D+V+W  MI   V+      G+  F
Sbjct: 155 GLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLF 214

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAK 120
            EM  E ++ D  TL+I++S+  ++  L+ GR +H   I+   +  D  + N  V+MY K
Sbjct: 215 FEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLK 274

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGD N +   F  M   + VSWN+++SG       ++ L  FR+M   G + D+V+L + 
Sbjct: 275 CGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAV 334

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVS----VTNSLISMYSQCGDIEAAERAFWG 236
           + + A LG L  GK +HA      Y D   +     + N+L+ MY++CG I+ A   F  
Sbjct: 335 LNSCANLGVLELGKWVHA------YLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQA 388

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  KDV S+ A+I G A++G+  +A DL  EM  M  +EPD  T V +++ C+   L+ E
Sbjct: 389 MNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKM-GIEPDEVTFVGVLTACSHVGLVEE 447

Query: 297 GRS 299
           GR 
Sbjct: 448 GRK 450



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 117/259 (45%), Gaps = 5/259 (1%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F E   K+VV+WN+MI+   +       L+ F +M   G++ D  TL+ ++++   +  
Sbjct: 284 VFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGV 343

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+ G+ VH    +  + AD  + N  V+MYAKCG ++ +   F  M+  D  S+  ++ G
Sbjct: 344 LELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVG 403

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              +    K L  F EM   G + D V+    + A + +G +  G+      +   Y   
Sbjct: 404 LAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFE-DMSTIYNLR 462

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHE 267
           P +     ++ +  + G I  AE     M  + D     A++    ++GK E    ++ +
Sbjct: 463 PQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKK 522

Query: 268 MQLMRSVEPDIATVVTLIS 286
           ++    +EP       L+S
Sbjct: 523 IE---KIEPRKDGAYVLMS 538


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 307/598 (51%), Gaps = 71/598 (11%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+++S Y+  G +  A   F G + +  ++W+++I G+   G+  EAFDL   M+L    
Sbjct: 150 NTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRL-EGQ 208

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +P   T+ +++  C+   L+++G  +HGY ++     ++ ++  L+D Y+K   +S+AE+
Sbjct: 209 KPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEI 268

Query: 335 LFNAIA-PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
           LF  +A    + V W +M++G             F+ M     + +  T  +IL +C+S 
Sbjct: 269 LFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSV 328

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +  FG+ +H   ++ GF  N    +AL+ MY  CGDL +A  +L+ +  + D   WN +
Sbjct: 329 SAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENME-DDDVVSWNSM 387

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           IV C ++G  +EAI  FK M   +N   D  T  +V++ C  +    +GKS+H L +K+ 
Sbjct: 388 IVGCVRHGFEEEAILLFKKM-HARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVIKTG 444

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
                 V NAL+ MY +  D+  A  VFE  +  ++ +W  +++ ++QN +   +L+ F 
Sbjct: 445 FENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFC 504

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
             R     P++  + SILSAC +L +L  GKQ+H     LG + +  ++++L+ MY+ C 
Sbjct: 505 DMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCG 564

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         +    W+++I  Y  +GKG ++                        
Sbjct: 565 CLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDS------------------------ 600

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
                      L+Y+  M + Y + P  EH+ C++D+ GR GKL EA E +  + ++P  
Sbjct: 601 -----------LKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDA 649

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VW A+L+AC  HG+ ++G++ A  LF+LEP N   Y+ LSNMY+A  +W DA +I +
Sbjct: 650 TVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRR 707



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 239/503 (47%), Gaps = 26/503 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D    N  V+ YA  G L  +   F+G     +++W++++SG        +    F+ M 
Sbjct: 145 DEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMR 204

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G++    +L S +   + LG +  G++IH   +K G+E + Y  V   L+ MY++C  
Sbjct: 205 LEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVY--VVAGLVDMYAKCRH 262

Query: 227 IEAAERAFWGMTCK--DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           I  AE  F G+     + V W A++ G+A NG   +A +    M     VE +  T  ++
Sbjct: 263 ISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMH-TEGVESNQFTFPSI 321

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           ++ C+       G  VHG  +R   G +  + ++L+D Y+K   L  A+ +   +   +D
Sbjct: 322 LTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMED-DD 380

Query: 345 LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           +VSWNSMI G            LFK+M     +    T  ++L  C        GKS+HC
Sbjct: 381 VVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRI--DGKSVHC 438

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +K GF N  +  NAL+ MY    DL  A+++ +++    D   W  ++   TQNG  +
Sbjct: 439 LVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKM-FEKDVISWTSLVTGYTQNGSHE 497

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           E++KTF  M +    SPD   + +++SAC  L L   GK +H   +K  +     V N+L
Sbjct: 498 ESLKTFCDM-RISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSL 556

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPN 568
           +TMY +C  +  A  +F S +  ++ TW  +I  +++N     +L+ F+ ++     EP 
Sbjct: 557 VTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPG 616

Query: 569 EISIVSILSACTQLGVLRHGKQI 591
                 ++    +LG L   K+I
Sbjct: 617 PEHYACMIDLFGRLGKLDEAKEI 639



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 242/529 (45%), Gaps = 52/529 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA------CVENRCVVMGL----- 58
           S  LL   S     + +  LF +   +D  TWN M++        VE R +  G      
Sbjct: 118 SNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSS 177

Query: 59  --------------------HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
                                 F  M  EG +    TL  I+   + +  +++G ++H  
Sbjct: 178 ITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGY 237

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM--HCADTVSWNTIMSGCLHNNYPE 156
            +K G  ++  +    V+MYAKC  ++ +E  F G+  +  + V W  +++G   N    
Sbjct: 238 VVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDH 297

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           K + +FR M   G +++  +  S + A + +    +G+ +H   ++ G+  + YV   ++
Sbjct: 298 KAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQ--SA 355

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+ MY++CGD+ +A+R    M   DVVSWN++I G   +G  EEA  L  +M   R+++ 
Sbjct: 356 LVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMH-ARNMKI 414

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  T  ++++ C    +  +G+SVH   I+       L+ N+L+D Y+K+  L+ A  +F
Sbjct: 415 DHYTFPSVLNCCIVGRI--DGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVF 472

Query: 337 NAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL------------LAILPSCNSPESL 384
             +    D++SW S+++G  +   +  S  +F  +             +IL +C     L
Sbjct: 473 EKMFE-KDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLL 531

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           EFGK +H   +KLG  ++    N+L+ MY  CG L  A ++   + H  D   W  +IV 
Sbjct: 532 EFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSM-HVRDVITWTALIVG 590

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             +NG  ++++K F+ M +     P       +I   G L    E K +
Sbjct: 591 YARNGKGRDSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEI 639



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 216/453 (47%), Gaps = 30/453 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETC-NK-DVVTWNAMITACVENRCVVMGLH 59
           GF +++     L+  Y+   +   +  LF     NK + V W AM+T   +N      + 
Sbjct: 242 GFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIE 301

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FF  M  EG+  +  T   I++A + ++    G  VH   ++ G   ++ + +  V+MYA
Sbjct: 302 FFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYA 361

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGDL S++     M   D VSWN+++ GC+ + + E+ +L F++M     + D+ +  S
Sbjct: 362 KCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPS 421

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +  + C+     GK +H L IK G+E+  Y  V+N+L+ MY++  D+  A   F  M  
Sbjct: 422 VL--NCCIVGRIDGKSVHCLVIKTGFEN--YKLVSNALVDMYAKTEDLNCAYAVFEKMFE 477

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDV+SW +++ G+  NG  EE+     +M++   V PD   V +++S CA+  LL  G+ 
Sbjct: 478 KDVISWTSLVTGYTQNGSHEESLKTFCDMRI-SGVSPDQFIVASILSACAELTLLEFGKQ 536

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           VH   I+  L   L + NSL+  Y+K   L  A+ +F ++  + D+++W ++I G  +  
Sbjct: 537 VHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMH-VRDVITWTALIVGYARNG 595

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
               S   F  +  I      PE                          ++ ++   G L
Sbjct: 596 KGRDSLKYFQQMKKIYGIEPGPEHYA----------------------CMIDLFGRLGKL 633

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             A  +L ++    D + W  ++ AC  +G+ +
Sbjct: 634 DEAKEILNQMDVKPDATVWKALLAACRVHGNLE 666



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 8/234 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   S +L+  Y+       + A+F +   KDV++W +++T   +N      L  F
Sbjct: 444 GFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTF 503

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D   +  I+SA  ++  L+ G+ VH   IK G+ +  S+ N  V MYAKC
Sbjct: 504 CDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKC 563

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ ++  F  MH  D ++W  ++ G   N      L YF++M           +    
Sbjct: 564 GCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQM------KKIYGIEPGP 617

Query: 182 AASACLGEL--SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
              AC+ +L    GK+  A  I    +  P  +V  +L++     G++E  ERA
Sbjct: 618 EHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERA 671


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 183/615 (29%), Positives = 308/615 (50%), Gaps = 47/615 (7%)

Query: 205 YEDSPY--VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           +++ PY   S  N ++S Y +  ++  A   F  M  ++ VSW  +I G++ N + +EAF
Sbjct: 69  FDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAF 128

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +L  EM     V+PD  T  TL+S   D+  L+E   +H + IR      L++ NSL+D 
Sbjct: 129 NLYTEM-CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDS 187

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           Y K+  L  A  LF+ + P  D VS+N MI+G            LF +M  +  Q S  T
Sbjct: 188 YCKTCCLDIASQLFSEM-PTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFT 246

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
             A+L      E + FG+ IH   +K  +  +    NAL+  Y     +  A +L   + 
Sbjct: 247 FAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-----VTLVNVISACGNLE 485
              D   +NI+I     NG ++++   FK +   Q  S D       T+++V +   NL 
Sbjct: 307 E-LDGVSYNIIITGYAWNGQYEKSFDLFKRL---QGTSFDRKNFPFATMLSVAAIELNLS 362

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           +   G+  H  A+ +    + +V NAL+ MY +C   + A+ +F +    N   W  +IS
Sbjct: 363 M---GRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIIS 419

Query: 546 AFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            + Q      AL++F+ +  E    ++ +  S L A   L  +  GKQ+H  V  LG   
Sbjct: 420 IYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLS 479

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           + F  S L+DMY+NC               ++   W+++ISAY  +G        F +M 
Sbjct: 480 SVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMI 539

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
            SG+ P   S +S+L+ACSH GLV++ L Y+N+M + Y + P  +H+  ++D+L RSG+ 
Sbjct: 540 ESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRF 599

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP-ENVGYYISLSNM 766
            EA   I  +P +P   +W ++L++C  H +  + K+ A+ LFK++   +   Y+++SN+
Sbjct: 600 NEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNI 659

Query: 767 YVALGRWKDAVEIGK 781
           Y   G+W++A ++ K
Sbjct: 660 YAEAGKWENAAKVKK 674



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 280/636 (44%), Gaps = 64/636 (10%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF    +++ V+W  MI    +N       + + EM   G++ D  T   ++S       
Sbjct: 99  LFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTT 158

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK+   +H   I+ G  A   + N  V+ Y K   L+ +   FS M   D+VS+N +++G
Sbjct: 159 LKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITG 218

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                + E+ L  F +M     Q    + ++ +  S    ++ +G+ IH L IK  Y   
Sbjct: 219 YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWD 278

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V+  N+L+  YS+   I+ A+  F  M   D VS+N II G+A NG++E++FDL   +
Sbjct: 279 IFVA--NALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q   S +       T++S+ A  L L  GR  H  A+      ++ + N+L+D Y+K   
Sbjct: 337 QGT-SFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEK 395

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
              A  +F  +A  N  V W ++IS             +FKEM         +T  + L 
Sbjct: 396 FEDANRIFANLAYRNS-VPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLK 454

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +  +  S+  GK +H   ++LG  ++    + L+ MY NCG +  A  + + +  + +  
Sbjct: 455 ASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIV 513

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
           CWN +I A +QNG  +    +F  M  +    PDSV+ ++V++AC          S  GL
Sbjct: 514 CWNALISAYSQNGDAEATFSSFADMI-ESGLYPDSVSFLSVLTAC----------SHRGL 562

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             K+L        N++  +Y      K  +T+ +           C    F  N+AE   
Sbjct: 563 VEKALWYF-----NSMTQVYKLDPRRKHYATMIDVL---------CRSGRF--NEAE--- 603

Query: 557 LELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
             L   + FEP+E+   S+L++C         K+    +F +          AL D    
Sbjct: 604 -NLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKM---------DALRDA--- 650

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
               AA+ +M + Y   GK   A ++   M   G++
Sbjct: 651 ----AAYVNMSNIYAEAGKWENAAKVKKAMRERGVK 682



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 242/500 (48%), Gaps = 33/500 (6%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           ++S  N+ V+ Y K  +L  +   F  M   + VSW  ++ G   NN P++    + EM 
Sbjct: 76  NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
            SG + D+++ ++ ++       L     IH+  I+ G+  S  + V NSL+  Y +   
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSAS--LIVFNSLVDSYCKTCC 193

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           ++ A + F  M  KD VS+N +I G+   G  EEA  L  +M+ M   +P   T   ++ 
Sbjct: 194 LDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNM-DFQPSGFTFAAMLG 252

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
           +   S  +  G+ +HG AI+    +D+ + N+L+DFYSK + +  A+ LF+ + P  D V
Sbjct: 253 MSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEM-PELDGV 311

Query: 347 SWNSMISG------------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           S+N +I+G            LFK +    +    F F+T+L++        +L  G+  H
Sbjct: 312 SYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV---AAIELNLSMGRQTH 368

Query: 392 CWQ-LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
               +    S   +G NAL+ MY  C     A  +   +++ +    W  +I    Q G 
Sbjct: 369 AQAVVTTAVSEVQVG-NALVDMYAKCEKFEDANRIFANLAYRNSVP-WTAIISIYVQKGF 426

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV-- 508
            +EA+K FK M  ++N   D  T  + + A  NL     GK LH   ++  +GL + V  
Sbjct: 427 HEEALKMFKEMN-RENVHGDQATFASTLKASANLASVSLGKQLHSSVIR--LGLLSSVFS 483

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN-KAEVRALELFRHLE--F 565
            + L+ MY  C  +K A  VF+   + N+  WN +ISA+SQN  AE         +E   
Sbjct: 484 GSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGL 543

Query: 566 EPNEISIVSILSACTQLGVL 585
            P+ +S +S+L+AC+  G++
Sbjct: 544 YPDSVSFLSVLTACSHRGLV 563



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 209/480 (43%), Gaps = 27/480 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A L    SL+ +Y      + +  LF E   KD V++N MIT   +       L  F
Sbjct: 173 GFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLF 232

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M     +    T   ++        +  G+ +H L+IK   + D  + N  ++ Y+K 
Sbjct: 233 MQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKH 292

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ ++  F  M   D VS+N I++G   N   EK    F+ +  +     N   ++ +
Sbjct: 293 DYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           + +A    LS G+  HA  +         V V N+L+ MY++C   E A R F  +  ++
Sbjct: 353 SVAAIELNLSMGRQTHAQAVVTTAVSE--VQVGNALVDMYAKCEKFEDANRIFANLAYRN 410

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V W AII  +   G  EEA  +  EM    +V  D AT  + +   A+   +  G+ +H
Sbjct: 411 SVPWTAIISIYVQKGFHEEALKMFKEMN-RENVHGDQATFASTLKASANLASVSLGKQLH 469

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
              IR  L   +   + L+D Y+   S+  A  +F  + P  ++V WN++IS   +    
Sbjct: 470 SSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM-PDRNIVCWNALISAYSQNG-- 526

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             ++ +FS+   ++ S   P+S+ F        L +  + +  G+      Y N   +  
Sbjct: 527 -DAEATFSSFADMIESGLYPDSVSF--------LSVLTACSHRGLVEKALWYFNS--MTQ 575

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
            + L  R  H +      ++ V C ++G F EA    +++  +    PD V   +V+++C
Sbjct: 576 VYKLDPRRKHYA-----TMIDVLC-RSGRFNEA----ENLISEMPFEPDEVMWSSVLNSC 625



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 126/292 (43%), Gaps = 9/292 (3%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           ++ +    +L+  Y+    FE +  +F     ++ V W A+I+  V+       L  F E
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M  E +  D  T    + A   +  +  G+ +H   I+ G+++     +V V+MYA CG 
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGS 496

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +  +   F  M   + V WN ++S    N   E     F +M  SG   D+VS  S + A
Sbjct: 497 MKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTA 556

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DV 242
            +  G L    + +   +   Y+  P      ++I +  + G    AE     M  + D 
Sbjct: 557 CSHRG-LVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDE 615

Query: 243 VSWNAIIDGFALNGKFE---EAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           V W+++++   ++   +   +A D L +M  +R    D A  V + ++ A++
Sbjct: 616 VMWSSVLNSCRIHKNQDLAKKAADQLFKMDALR----DAAAYVNMSNIYAEA 663



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L+ + + + L+  Y+N    + ++ +F E  ++++V WNA+I+A  +N         F
Sbjct: 476 GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSF 535

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL------CNVFV 115
            +M+E G+  DS + L +++A     C  +G V   L     M     L          +
Sbjct: 536 ADMIESGLYPDSVSFLSVLTA-----CSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMI 590

Query: 116 NMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           ++  + G  N +E   S M    D V W+++++ C +H N
Sbjct: 591 DVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKN 630


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 179/618 (28%), Positives = 318/618 (51%), Gaps = 42/618 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+   G+ +HA  ++ G          N L+++Y++ G + AA R F GM  +++VS+  
Sbjct: 61  GDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVT 120

Query: 248 IIDGFALNGKFEEAFDLLHEMQLM-RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++ G+AL G FEEA  L   +Q     V   + T +  + +  D+  L     +H  A +
Sbjct: 121 LVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTC--CIHACACK 178

Query: 307 RLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
             LG+D    + +SL+D YS   ++S A  +F+ I    D V+W +M+S           
Sbjct: 179 --LGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGII-WKDAVTWTAMVSCYSENDIPEDA 235

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNTIGVNALMH 411
              F +M    ++ +   L ++L +     S   GK IH C    L  +   +G  AL+ 
Sbjct: 236 LNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG-GALLD 294

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A ++ + I H+ D   W+ +I    Q+   ++A + F  M  + +  P+ 
Sbjct: 295 MYAKCGYIEDARTVFEIIPHD-DVILWSFLISRYAQSYQNEQAFEMFLRM-MRSSVVPNE 352

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            +L  V+ AC N+     G+ +H L +K     +  V NAL+ +Y +CR+++++  +F S
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRS 412

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
             + N  +WN +I  + Q+     AL +F+ +        +++  S+L AC     ++H 
Sbjct: 413 LRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHT 472

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCK---------------SNAAWSSMISAYGYH 633
            QIH  +    F  ++ + ++L+D Y+ C                   +W+++IS Y  H
Sbjct: 473 VQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALH 532

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G+  +A+ELF+ M  S  +P   + ++LLS C  +GLV++GL  +N+M  ++ ++P  +H
Sbjct: 533 GRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDH 592

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + CIV +LGR+G+L +A +FI ++P  P P VW A+LS+C  H +  +GK  AE + ++E
Sbjct: 593 YTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIE 652

Query: 754 PENVGYYISLSNMYVALG 771
           P++   Y+ LSNMY A G
Sbjct: 653 PQDETTYVLLSNMYAAAG 670



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 261/532 (49%), Gaps = 37/532 (6%)

Query: 1   RGFLAHLPT--STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG +A L T  +  LL  Y+ +    ++  LF     +++V++  ++             
Sbjct: 76  RGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAA 135

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F  +  EG   +   L  I+  L  M+       +H  + K G   ++ + +  ++ Y
Sbjct: 136 GLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAY 195

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           + CG ++ + C F G+   D V+W  ++S    N+ PE  L  F +M  +G + +   L+
Sbjct: 196 SLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLT 255

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A+ CL     GK IH   +K   +  P+V    +L+ MY++CG IE A   F  + 
Sbjct: 256 SVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG--GALLDMYAKCGYIEDARTVFEIIP 313

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREG 297
             DV+ W+ +I  +A + + E+AF++   +++MR SV P+  ++  ++  CA+   L  G
Sbjct: 314 HDDVILWSFLISRYAQSYQNEQAFEMF--LRMMRSSVVPNEFSLSGVLQACANVAFLDLG 371

Query: 298 RSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           + +H   I+  LGY  +L + N+LMD Y+K  ++  +  +F ++   N+ VSWN++I G 
Sbjct: 372 QQIHNLVIK--LGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE-VSWNTIIVGY 428

Query: 355 -----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                      +F+EM     L +Q +FS+   +L +C +  S++    IH    K  F+
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSS---VLRACANTASIKHTVQIHSLIEKSTFN 485

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           N+TI  N+L+  Y  CG +  A  + + I    D   WN +I     +G   +A++ F  
Sbjct: 486 NDTIVCNSLIDTYAKCGCIRDALKVFESIIQ-CDVVSWNAIISGYALHGRATDALELFNR 544

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           M  + +  P+ VT V ++S CG+  L  +     GL+L + M +D R++ ++
Sbjct: 545 M-NKSDTKPNDVTFVALLSVCGSTGLVNQ-----GLSLFNSMTMDHRIKPSM 590



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 227/511 (44%), Gaps = 23/511 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+ AYS       +  +F     KD VTW AM++   EN      L+ F +M   G +
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +   L  ++ A   ++    G+ +H  ++K     +  +    ++MYAKCG +  +   
Sbjct: 249 PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTV 308

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D + W+ ++S    +   E+    F  M  S    +  SLS  + A A +  L
Sbjct: 309 FEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL 368

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ IH L IKLGYE   +V   N+L+ +Y++C ++E +   F  +   + VSWN II 
Sbjct: 369 DLGQQIHNLVIKLGYESELFVG--NALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIV 426

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  +G  E+A  +  EM+    +   + T  +++  CA++  ++    +H    +    
Sbjct: 427 GYCQSGFAEDALSVFQEMRAAHVLSTQV-TFSSVLRACANTASIKHTVQIHSLIEKSTFN 485

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            D ++ NSL+D Y+K   +  A  +F +I    D+VSWN++ISG            LF  
Sbjct: 486 NDTIVCNSLIDTYAKCGCIRDALKVFESIIQC-DVVSWNAIISGYALHGRATDALELFNR 544

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
           M    ++ +  T +A+L  C S   +  G S+ +   +      +      ++ +    G
Sbjct: 545 MNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAG 604

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV-- 475
            L  A   +  I        W  ++ +C    H   A+  F +    +    D  T V  
Sbjct: 605 RLNDALKFIGDIPSTPSPMVWRALLSSCVV--HKNVALGKFSAEKVLEIEPQDETTYVLL 662

Query: 476 -NVISACGNL-ELAFEGKSLHGLALKSLMGL 504
            N+ +A G L ++A   KS+  + +K  +GL
Sbjct: 663 SNMYAAAGILDQVALLRKSMRNIGVKKEVGL 693


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 196/629 (31%), Positives = 331/629 (52%), Gaps = 54/629 (8%)

Query: 194 KVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           K IHA L +  G+ +S     T  LIS YS+  D+E+A   F  +   + +SWN I+   
Sbjct: 45  KQIHASLLVSTGFNESISFPSTK-LISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTH 103

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL----ISLCADSLLLREGRSVHGYAIRRL 308
              G   EA  LL++      V+ D  T  T+    +SL +D LL   G+ VH  A++  
Sbjct: 104 LDFGLVTEAL-LLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLL---GKMVHCDAMKLG 159

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
            GYDL   N++++ Y++   +    ++F+ ++P  DLVSW SMISG            LF
Sbjct: 160 FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSP-RDLVSWTSMISGYVSEGNVFSAFELF 218

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            +M  L  + +  TL+ +L  C + ++   G+ +HC+ +K G        N+++ MY   
Sbjct: 219 NKM-RLEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSIT 277

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV- 475
           G      SL   I +  D   WN +I      G  +E +  F  M  +   S +++TLV 
Sbjct: 278 GSAKEVESLFVEI-YRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVI 336

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYN 534
           +V +  GNL    EG+ LH  ++K  +GL D  +  +L+  Y +C +++++  +F     
Sbjct: 337 SVFAKIGNL---VEGEKLHSFSIK--VGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPC 391

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQI 591
            +  TW  M+S   QN     A+ LFR ++    ++    + S++ AC+ LG L+  K+I
Sbjct: 392 RSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEI 451

Query: 592 HGHV----FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           HG++    F++   +N  + +++L+MY  C               K N  W+SMI  YG 
Sbjct: 452 HGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGI 511

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           HG   EA++LF++M    + P + + +SLLSACSHSGL+ +G + + +M   + + P+ +
Sbjct: 512 HGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLD 571

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LGR GK++EA   I  + +     +WGA++++C  HGD K+G+  A+ L ++
Sbjct: 572 HYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEM 631

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
           E +NVGYY  LSN+   +G+W +  ++ K
Sbjct: 632 ESDNVGYYTLLSNIQAMVGKWDEVEQVRK 660



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 276/589 (46%), Gaps = 31/589 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST L++ YS  +  ES++++F      + ++WN ++   ++   V   L  + +M E G+
Sbjct: 65  STKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESGV 124

Query: 70  RFDSTTLLIIVSALTQMNC-LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           + D+ T   I  A+  +   +  G++VHC ++K G   D   CN  + +YA+CG +    
Sbjct: 125 KTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGR 184

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D VSW +++SG +           F +M    E  ++V+L   +       
Sbjct: 185 VMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLEME-PNSVTLIVMLKGCYAYD 243

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
             S G+ +H   IK G     Y SV NS++ MYS  G  +  E  F  +  +DV+SWN +
Sbjct: 244 NFSEGRQLHCYIIKNGL--LIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTL 301

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +AL G  EE     ++M+   ++  +  T+V  IS+ A    L EG  +H ++I+  
Sbjct: 302 IGFYALRGDAEEMVCGFNQMRGEVALSSETLTLV--ISVFAKIGNLVEGEKLHSFSIKVG 359

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+L+  SL+DFY+K   L  +  LF  I P     +W  M+SG            LF
Sbjct: 360 LCDDVLLA-SLLDFYAKCGELRNSVQLFGEI-PCRSSSTWKLMMSGCIQNGYFDEAIHLF 417

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF----SNNTIGVNALMHM 412
           ++M     Q     L +++ +C+   SL+  K IH +  +  F     +N     ++++M
Sbjct: 418 RQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNM 477

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           YI CG + +A     R+    D   W  +I     +G   EA+K F  M  ++   P+ V
Sbjct: 478 YIRCGSISSAREYFNRMV-AKDNITWTSMIEGYGIHGMAIEALKLFNQMLVER-VLPNRV 535

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVF 529
           T ++++SAC +  L  +G  L  L++K + G++  + +   ++ + GRC  IK A + + 
Sbjct: 536 TFLSLLSACSHSGLIRQGCELF-LSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMII 594

Query: 530 ESCYNCNLCTWNCMI-SAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                 +   W  ++ S       +V      R LE E + +   ++LS
Sbjct: 595 RMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTLLS 643



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 11/301 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV---ENRCVVMGL 58
           G L +     S+L  YS     +   +LF E   +DV++WN +I       +   +V G 
Sbjct: 259 GLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCG- 317

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F +M  E +   S TL +++S   ++  L +G  +H  SIK G+  D  L ++ ++ Y
Sbjct: 318 --FNQMRGE-VALSSETLTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDVLLASL-LDFY 373

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AKCG+L +S   F  + C  + +W  +MSGC+ N Y ++ +  FR+M  SG Q     L 
Sbjct: 374 AKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILG 433

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYE--DSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           S V A + LG L   K IH    +  +   +   + +  S+++MY +CG I +A   F  
Sbjct: 434 SLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNR 493

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  KD ++W ++I+G+ ++G   EA  L ++M L+  V P+  T ++L+S C+ S L+R+
Sbjct: 494 MVAKDNITWTSMIEGYGIHGMAIEALKLFNQM-LVERVLPNRVTFLSLLSACSHSGLIRQ 552

Query: 297 G 297
           G
Sbjct: 553 G 553



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 226/497 (45%), Gaps = 26/497 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L    +++  Y+          +F E   +D+V+W +MI+  V    V      F
Sbjct: 159 GFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELF 218

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  E +  +S TL++++      +   +GR +HC  IK G++   S+ N  + MY+  
Sbjct: 219 NKMRLE-MEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSIT 277

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSA 180
           G     E  F  ++  D +SWNT++         E+ +  F +M   GE A  + +L+  
Sbjct: 278 GSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQM--RGEVALSSETLTLV 335

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A +G L  G+ +H+  IK+G  D   ++   SL+  Y++CG++  + + F  + C+
Sbjct: 336 ISVFAKIGNLVEGEKLHSFSIKVGLCDDVLLA---SLLDFYAKCGELRNSVQLFGEIPCR 392

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
              +W  ++ G   NG F+EA  L  +MQ    V+     + +L+  C+    L+  + +
Sbjct: 393 SSSTWKLMMSGCIQNGYFDEAIHLFRQMQ-ASGVQLQAQILGSLVDACSHLGSLQLCKEI 451

Query: 301 HGYAIRRLL----GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           HGY  R       G ++ +  S+++ Y +  S+S A   FN +    D ++W SMI G  
Sbjct: 452 HGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVA-KDNITWTSMIEGYG 510

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNT 403
                     LF +ML      +  T L++L +C+    +  G  +    +   G   + 
Sbjct: 511 IHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDL 570

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                ++ +   CG +  A +++ R+   +D+  W  ++ +C  +G  +      + + +
Sbjct: 571 DHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLE 630

Query: 464 QQNASPDSVTLVNVISA 480
            ++ +    TL++ I A
Sbjct: 631 MESDNVGYYTLLSNIQA 647


>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
          Length = 663

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 183/613 (29%), Positives = 303/613 (49%), Gaps = 45/613 (7%)

Query: 196 IHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW-NAIIDGF 252
           +HAL +  G+   DSP++     L+  Y  CG    A+     M     VS  N ++  +
Sbjct: 34  LHALLLTSGHLHYDSPHL-----LLYSYCACGCPFDAQNLLAQMPQPASVSVSNTLLRSY 88

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           +  G   +A  L  +M+       D  T       CA   L R GR+VHG A+    G D
Sbjct: 89  SGLGFHRQALALYSQMRHF-----DHLTFTFAAKACAGLRLRRHGRAVHGRALAAGFGSD 143

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             + N+++  Y +   ++ AE +F A+ P    VSWN++I+G            +F+ M+
Sbjct: 144 AYVQNAIVSMYMRCRDVAAAEAVFVAL-PSRTTVSWNTVITGCVKDGRAERALEVFETMV 202

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                   ++++++LP+C     L  G+++H   +  G        NAL+ MY  CG L 
Sbjct: 203 DRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDMYGKCGSLE 262

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +    S++ D   W ++I A   N H  +A      M     A P++VT+ +++SA
Sbjct: 263 DARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSA 322

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +L      K  H L ++  +G D  V+ AL+  Y +C  +     V E        TW
Sbjct: 323 CASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVEKGSR-RTETW 381

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N  IS ++Q     +AL LF+ +  E   P+  ++ S++ A  +   L     IH  +  
Sbjct: 382 NAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLV 441

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G   ++ I++ L+D+Y+                 K   AW+++I+ YG HG    A+ L
Sbjct: 442 RGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLL 501

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           +  M   G+ P   ++ SLL +CSH+G+VDEGL+ +N+M   + + P  EH++C+VDMLG
Sbjct: 502 YSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLG 561

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+++EAY  I+++P +P   VW ++L AC  H + + G+  A+ LF+LEP+NVG Y+ 
Sbjct: 562 RAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFELEPDNVGNYVL 621

Query: 763 LSNMYVALGRWKD 775
           L  +Y A  RW D
Sbjct: 622 LGKVYAAAERWSD 634



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/597 (27%), Positives = 268/597 (44%), Gaps = 77/597 (12%)

Query: 3   FLAHLP------TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVM 56
            LA +P       S +LL +YS + +   +LAL+ +  + D +T+     AC        
Sbjct: 68  LLAQMPQPASVSVSNTLLRSYSGLGFHRQALALYSQMRHFDHLTFTFAAKACA------- 120

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
                      G+R                   + GR VH  ++ AG  +D+ + N  V+
Sbjct: 121 -----------GLRLR-----------------RHGRAVHGRALAAGFGSDAYVQNAIVS 152

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MY +C D+ ++E  F  +    TVSWNT+++GC+ +   E+ L  F  M   G   D  S
Sbjct: 153 MYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRAS 212

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           + S + A A   +L  G+ +H L +  G     YV+V N+LI MY +CG +E A R F  
Sbjct: 213 VVSVLPACAQARDLHTGRAVHRLAVVRGL--GKYVAVKNALIDMYGKCGSLEDARRVFDE 270

Query: 237 MTC-KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  KDVVSW  +I  + LN    +AF L  EM +    +P+  T+  L+S CA  L  +
Sbjct: 271 DSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSACASLLSGK 330

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
             +  H   IR  LG D+++  +L+D Y+K   +   +++    +   +  +WN+ ISG 
Sbjct: 331 HAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVEKGSRRTE--TWNAAISGY 388

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      LFK ML    +   +T+ +++P+      L    +IHC  L  G   +T
Sbjct: 389 TQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVST 448

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
                L+ +Y   GDL  A+ L Q +    D   W  VI     +GH Q A+  +  M  
Sbjct: 449 DIATGLIDLYAKAGDLGVAWELFQCLP-EKDVVAWTTVIAGYGMHGHAQTAMLLYSRMV- 506

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-----LITMYGR 518
           +    P++VT+ +++ +C +  +  EG  L       + G+   + NA     L+ M GR
Sbjct: 507 ELGVMPNTVTIASLLHSCSHAGMVDEGLRL----FNDMHGVHGLMPNAEHYLCLVDMLGR 562

Query: 519 CRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEI 570
              I+ A    E   +   +  W+ ++ A   ++     EV A  LF   E EP+ +
Sbjct: 563 AGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLF---ELEPDNV 616



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 17/266 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   T+L+  Y+   Y    + +  E  ++   TWNA I+   +       L  F
Sbjct: 343 GLGSDIVVETALVDCYAKCGYM-GVIDMVVEKGSRRTETWNAAISGYTQRDQGKKALALF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ E +R DS T+  ++ A  +   L Q   +HC  +  G +  + +    +++YAK 
Sbjct: 402 KRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKA 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  +   D V+W T+++G   + + +  +L +  M   G   + V+++S +
Sbjct: 462 GDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLL 521

Query: 182 AASACLGELSYG-------KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            + +  G +  G         +H L         P       L+ M  + G IE A R  
Sbjct: 522 HSCSHAGMVDEGLRLFNDMHGVHGL--------MPNAEHYLCLVDMLGRAGRIEEAYRRI 573

Query: 235 WGMTCKDVVS-WNAIIDGFALNGKFE 259
             M  +  VS W++++    L+   E
Sbjct: 574 EDMPFEPTVSVWSSLLGACVLHENVE 599



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG L     +T L+  Y+       +  LF     KDVV W  +I     +      +  
Sbjct: 442 RGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLL 501

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +  MVE G+  ++ T+  ++ + +    + +G R+ + +    G++ ++      V+M  
Sbjct: 502 YSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLG 561

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
           + G +  +      M    TVS W++++  C LH N
Sbjct: 562 RAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHEN 597


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/540 (30%), Positives = 279/540 (51%), Gaps = 37/540 (6%)

Query: 277 DIATVVTL---ISLCADSLLLREGRSVHGY-AIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
           D AT + L   +  C  +  LR GR +H    +         + N L+  YS    +  A
Sbjct: 13  DTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSA 72

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL--LAILPS----------CNS 380
             LF+A+ P  +LVSW +++SGL +  ++  +  +FS++    ++P+            +
Sbjct: 73  VRLFDAM-PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAA 131

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +   G  +HC  ++LGF       + L  MY   G LV A  +  ++    D   W  
Sbjct: 132 LAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQK-DAVAWTA 190

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I    +NG+ + A+  F+ M ++     D   L +V+SA G L+  +  +++H   +KS
Sbjct: 191 MIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKS 250

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               +  V+NAL  MY +  D+ +A+ V +    + N+ +   +I  + +     +AL +
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 560 F---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F   R    EPNE +  S++  C    +L  G Q+H  V       +SF+SS LLDMY  
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C                ++ AW++ I+    HG G EAI  F  M +SGIRP   + +SL
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           L+ACSH+GLVDEGL+Y+ +M + + + P+ EH+ CI+DM GR+G+L EA +FI  +P++P
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKP 490

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
               W ++L AC   G+ ++G+  A+ + KLEP+N G ++SLS +Y +LG+W+D   + K
Sbjct: 491 NAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRK 550



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 250/534 (46%), Gaps = 37/534 (6%)

Query: 71  FDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNS 126
            D+ T L + + L    +   L+ GR +H   + +G  A S+ L N  + MY+ C D+ S
Sbjct: 12  LDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPS 71

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   + VSW T++SG   N+     L  F  M  +G      +LSSA  A+A 
Sbjct: 72  AVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAA 131

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L     G  +H +G++LG++   +V+  ++L  MYS+ G +  A R F  M  KD V+W 
Sbjct: 132 LAARHAGAQLHCVGVRLGFDAELFVA--SNLADMYSKSGLLVEACRVFDQMPQKDAVAWT 189

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG---RSVHGY 303
           A+IDG+A NG  E A     +M+    V  D   + +++S       L++G   R++H  
Sbjct: 190 AMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGG---LKDGWLARAIHSC 246

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------K 357
            ++     ++ + N+L D Y+K+  +  A  +        ++VS  S+I G        K
Sbjct: 247 VMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEK 306

Query: 358 EMLYLC---------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            +L            ++F+FS++   +  C     LE G  +H   +K    +++   + 
Sbjct: 307 ALLMFIELRRQGVEPNEFTFSSM---IKGCAMQALLEQGAQLHAEVIKTSLISDSFVSST 363

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY  CG +  +  L + I +++D + WN  I    Q+GH +EAI+ F  MT      
Sbjct: 364 LLDMYGKCGLISLSIQLFKEIEYHTDIA-WNAAINVLAQHGHGREAIRAFDRMT-SSGIR 421

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSAS 526
           P+ +T V++++AC +  L  EG   +  ++K   G++ + ++   +I MYGR   +  A 
Sbjct: 422 PNHITFVSLLTACSHAGLVDEGLK-YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAE 480

Query: 527 T-VFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILSA 578
             + E     N   W  ++ A   +   E+  +     ++ EP+   +   LS 
Sbjct: 481 KFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSG 534



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 202/453 (44%), Gaps = 19/453 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T YS+ +   S++ LF      ++V+W  +++   +N      L  F  M   G+   
Sbjct: 59  LITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPT 118

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L     A   +     G  +HC+ ++ G  A+  + +   +MY+K G L  +   F 
Sbjct: 119 QFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFD 178

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELS 191
            M   D V+W  ++ G   N   E  ++ FR+M   G   AD   L S ++AS  L +  
Sbjct: 179 QMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGW 238

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCKDVVSWNAIID 250
             + IH+  +K G+E    V+V N+L  MY++  D++ A R         +VVS  ++ID
Sbjct: 239 LARAIHSCVMKSGFEQE--VAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLID 296

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+      E+A  +  E++  + VEP+  T  ++I  CA   LL +G  +H   I+  L 
Sbjct: 297 GYIETDCIEKALLMFIELR-RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLI 355

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ 365
            D  + ++L+D Y K   +S +  LF  I    D ++WN+ I+     G  +E +    +
Sbjct: 356 SDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTD-IAWNAAINVLAQHGHGREAIRAFDR 414

Query: 366 FSFS-------TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            + S       T +++L +C+    ++ G K  +  +   G        + ++ MY   G
Sbjct: 415 MTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAG 474

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
            L  A   +  +    +   W  ++ AC   G+
Sbjct: 475 RLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 160/357 (44%), Gaps = 12/357 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A L  +++L   YS       +  +F +   KD V W AMI    +N  +   +  F
Sbjct: 149 GFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAF 208

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        ++ S L+    LK G   R +H   +K+G   + ++ N   +MY
Sbjct: 209 RDMRREGLV--GADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMY 266

Query: 119 AKCGDL-NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           AK  D+ N++          + VS  +++ G +  +  EK LL F E+   G + +  + 
Sbjct: 267 AKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTF 326

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           SS +   A    L  G  +HA  IK       +VS T  L+ MY +CG I  + + F  +
Sbjct: 327 SSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSST--LLDMYGKCGLISLSIQLFKEI 384

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
                ++WNA I+  A +G   EA      M     + P+  T V+L++ C+ + L+ EG
Sbjct: 385 EYHTDIAWNAAINVLAQHGHGREAIRAFDRMT-SSGIRPNHITFVSLLTACSHAGLVDEG 443

Query: 298 RSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              + Y+++   G +      + ++D Y ++  L +AE     +    +   W S++
Sbjct: 444 LK-YFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 126/281 (44%), Gaps = 12/281 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLHF 60
           GF   +    +L   Y+  +  +++  +   +  + +VV+  ++I   +E  C+   L  
Sbjct: 251 GFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E+  +G+  +  T   ++        L+QG  +H   IK  +I+DS + +  ++MY K
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ S   F  +     ++WN  ++    + +  + +  F  M  SG + ++++  S 
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + A +  G +  G K  +++    G E  P     + +I MY + G ++ AE+    M  
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIE--PKGEHYSCIIDMYGRAGRLDEAEKFIGEMPV 488

Query: 240 K-DVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPD 277
           K +   W +++    + G  E     L E+    M  +EPD
Sbjct: 489 KPNAYGWCSLLGACRMRGNKE-----LGEIAADNMMKLEPD 524


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 193/628 (30%), Positives = 313/628 (49%), Gaps = 47/628 (7%)

Query: 193 GKVIHALGIKLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIID 250
           G ++H    KL   D    SVT NSLIS+YS+CG  E A   F  M + +D++SW+A++ 
Sbjct: 85  GTLVHE---KLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVS 141

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LL 309
            FA N     A     +M +     P+          C+ +  +  G S+ G+ ++   L
Sbjct: 142 CFANNNMGFRALLTFVDM-IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYL 200

Query: 310 GYDLLMMNSLMDFYSKSN-SLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
             D+ +   L+D + K    L  A  +F  + P  + V+W  MI+             LF
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKM-PERNAVTWTLMITRLMQFGYAGEAIDLF 259

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
            EM+    +    TL  ++ +C + E L  G+ +H   ++ G + +      L++MY  C
Sbjct: 260 LEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319

Query: 417 ---GDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHF-QEAIKTFKSMTQQQNASPDS 471
              G + AA  +  +I  HN     W  +I    Q G + +EA+  F+ M    +  P+ 
Sbjct: 320 SVDGSMCAARKIFDQILDHN--VFSWTAMITGYVQKGGYDEEALDLFRGMILT-HVIPNH 376

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T  + + AC NL     G+ +   A+K        V N+LI+MY R   I  A   F+ 
Sbjct: 377 FTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDI 436

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
            +  NL ++N +I A+++N     ALELF  +E +    +  +  S+LS    +G +  G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           +QIH  V   G + N  + +AL+ MYS C               ++  +W+S+I+ +  H
Sbjct: 497 EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G   +A+ELFH+M   G+RP   + I++LSACSH GLV+EG +++ +M  E+ V P  EH
Sbjct: 557 GFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH 616

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+LGRSG L EA +FI ++P +    VW   L AC  HG+ ++GK  A+++ + E
Sbjct: 617 YACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P +   YI LSN+Y +  +W +   I K
Sbjct: 677 PHDPAAYILLSNLYASTSKWDEVSNIRK 704



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 282/601 (46%), Gaps = 48/601 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           T  SL++ YS    +E + ++F     ++D+++W+AM++    N      L  F +M+E 
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKC-GDLN 125
           G   +         A +    +  G  +    +K G + +D  +    ++M+ K  GDL 
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLV 222

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
           S+   F  M   + V+W  +++  +   Y  + +  F EM  SG + D  +LS  ++A A
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC---GDIEAAERAFWGMTCKDV 242
            +  L  G+ +H+  I+ G      V     LI+MY++C   G + AA + F  +   +V
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCC--LINMYAKCSVDGSMCAARKIFDQILDHNV 340

Query: 243 VSWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            SW A+I G+   G + EEA DL   M ++  V P+  T  + +  CA+   LR G  V 
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGM-ILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399

Query: 302 GYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
            +A++  LG+  +  + NSL+  Y++S  +  A   F+ +   N L+S+N++I    K  
Sbjct: 400 THAVK--LGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN-LISYNTVIDAYAKNL 456

Query: 358 ---EMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
              E L L           S F+F++LL+      S  ++  G+ IH   +K G   N  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLS---GAASIGTIGKGEQIHARVIKSGLKLNQS 513

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL+ MY  CG++ +AF + + +   +  S W  +I    ++G   +A++ F  M  +
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTSIITGFAKHGFATQALELFHKML-E 571

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           +   P+ VT + V+SAC ++ L  EG   H  ++ +  G+  R+++   ++ + GR   +
Sbjct: 572 EGVRPNLVTYIAVLSACSHVGLVNEGWK-HFKSMYTEHGVIPRMEHYACMVDILGRSGSL 630

Query: 523 KSASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRH-----LEFEPNEISIVSIL 576
             A     S  Y  +   W   + A   +      LEL +H     +E EP++ +   +L
Sbjct: 631 SEAIQFINSMPYKADALVWRTFLGACRVHG----NLELGKHAAKMIIEQEPHDPAAYILL 686

Query: 577 S 577
           S
Sbjct: 687 S 687



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 35/480 (7%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
           S+  +F +   ++ VTW  MIT  ++       +  F EM+  G   D  TL  ++SA  
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADTVS 141
            M  L  G+ +H  +I+ G+  D  +    +NMYAKC   G + ++   F  +   +  S
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFS 342

Query: 142 WNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           W  +++G +    Y E+ L  FR M  +    ++ + SS + A A L  L  G+ +    
Sbjct: 343 WTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHA 402

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +KLG+  S    V NSLISMY++ G I+ A +AF  +  K+++S+N +ID +A N   EE
Sbjct: 403 VKLGF--SSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A +L +E++  + +     T  +L+S  A    + +G  +H   I+  L  +  + N+L+
Sbjct: 461 ALELFNEIE-DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALI 519

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
             YS+  ++  A  +F  +   N ++SW S+I+G            LF +ML    + + 
Sbjct: 520 SMYSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQ-LKLGFSNNTIGVNALMHMYI-------NCGDLV 420
            T +A+L +C+    +  G     W+  K  ++ +  GV   M  Y          G L 
Sbjct: 579 VTYIAVLSACSHVGLVNEG-----WKHFKSMYTEH--GVIPRMEHYACMVDILGRSGSLS 631

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A   +  + + +D   W   + AC  +G+ +      K + +Q+   P +  L++ + A
Sbjct: 632 EAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYA 691



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 135/286 (47%), Gaps = 8/286 (2%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            + SL++ Y+     + +   F     K+++++N +I A  +N      L  F E+ ++G
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +   + T   ++S    +  + +G  +H   IK+G+  + S+CN  ++MY++CG++ S+ 
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAF 532

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   + +SW +I++G   + +  + L  F +M   G + + V+  + ++A + +G
Sbjct: 533 QVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVG 592

Query: 189 ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWN 246
            ++ G K   ++  + G    P +     ++ +  + G +  A +    M  K D + W 
Sbjct: 593 LVNEGWKHFKSMYTEHGV--IPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWR 650

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADS 291
             +    ++G  E      H  +++   EP D A  + L +L A +
Sbjct: 651 TFLGACRVHGNLELG---KHAAKMIIEQEPHDPAAYILLSNLYAST 693


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 295/566 (52%), Gaps = 52/566 (9%)

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           +EA  +L + Q ++S     A  V L+  C ++  L   R++HG+ ++     D+ +  S
Sbjct: 62  QEAMGMLRDGQTVQS-----AMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATS 116

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++ Y +  S   A  LF+ + P  ++V+W ++I+G            +F EML L    
Sbjct: 117 LVNVYMRCASSRDARRLFDGM-PDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYP 175

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  TL  +L +C++   ++ G+ +H + +K G    T   N+L  +Y   GDL +     
Sbjct: 176 SHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAF 235

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQE-AIKTFKSMTQQQNASPDSVTLVNVISACG-NL 484
           +  + + +   W  +I +C ++ ++ +  +  F  M +     P+  TL +V+S CG  L
Sbjct: 236 KG-TPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEG-GVMPNEFTLTSVMSLCGARL 293

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +++  GK +     K     +  V+N+ + +Y R  +   A  +FE   + ++ TWN MI
Sbjct: 294 DMSL-GKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMI 352

Query: 545 SAFSQ-----------NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQ 590
           S ++Q                +AL+LFR L   E +P+  +  SILS C+ +  L  G+Q
Sbjct: 353 SGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQ 412

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH +    G   +  ++SAL++MY+ C               ++   W+SMIS Y  HG+
Sbjct: 413 IHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGR 472

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             +AI+LF +M  SG RP + + +SLLSACS++GLV+E  +Y++ M  EY + P  +H+ 
Sbjct: 473 SQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYG 532

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VDM  R G+L +A+ FIK    +P   +W ++++ C  HG+ ++    A+ L +L+P+
Sbjct: 533 CMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPK 592

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
            +  Y+ L NMY++ GRW+D   + K
Sbjct: 593 VIETYVLLLNMYISTGRWRDVARVRK 618



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 228/485 (47%), Gaps = 43/485 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  +TSL+  Y   +    +  LF    +K+VVTW A+IT    N    + L  F
Sbjct: 106 GTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVF 165

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+E G      TL  ++SA +    +  G+ VH  SIK G    +S+ N    +Y K 
Sbjct: 166 VEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKS 225

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSA 180
           GDL S    F G    + ++W T++S C  + NY +  L  F +M   G   +  +L+S 
Sbjct: 226 GDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSV 285

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++      ++S GK + A   K+G E +  + V NS + +Y + G+ + A R F  M   
Sbjct: 286 MSLCGARLDMSLGKQVQAFCYKVGCEAN--LPVKNSTMYLYLRKGETDEAMRLFEEMDSS 343

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHE-----------MQLMRS-VEPDIATVVTLISLC 288
            +++WNA+I G+A     + A D LH              L+RS ++PD+ T  +++S+C
Sbjct: 344 SIITWNAMISGYA--QIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVC 401

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +  + L +G  +H   I+     D+++ ++L++ Y+K  S+  A   F  + P    V+W
Sbjct: 402 SAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEM-PTRTPVTW 460

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
            SMISG            LF++M+   ++ +  T +++L +C+      +   +   +  
Sbjct: 461 TSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACS------YAGLVEEAERY 514

Query: 397 LGFSNNTIGVNAL-------MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
                N   +  L       + M++  G L  AFS ++R     + + W+ ++  C  +G
Sbjct: 515 FDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHG 574

Query: 450 HFQEA 454
           + + A
Sbjct: 575 NMELA 579



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 243/541 (44%), Gaps = 35/541 (6%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+ +G    S   + ++    +   L   R +H   +K G  AD  +    VN+Y +C  
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F GM   + V+W  +++G   N+ P   L  F EM   G    + +L   ++A
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            +    +  G+ +H   IK G +     S+ NSL  +Y + GD+E+  RAF G   K+V+
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADT--ITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVI 244

Query: 244 SWNAIIDGFALNGKF-EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           +W  +I   A +  + +    L  +M L   V P+  T+ +++SLC   L +  G+ V  
Sbjct: 245 TWTTMISSCAEDENYLDLGLSLFLDM-LEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 303

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           +  +     +L + NS M  Y +     +A  LF  +   + +++WN+MISG        
Sbjct: 304 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDS-SSIITWNAMISGYAQIMDSA 362

Query: 355 ---------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
                          LF++++    +    T  +IL  C++  +LE G+ IH   +K G 
Sbjct: 363 KDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGC 422

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            ++ +  +AL++MY  CG +  A      +   +  + W  +I   +Q+G  Q+AI+ F+
Sbjct: 423 LSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVT-WTSMISGYSQHGRSQDAIQLFE 481

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYG 517
            M     A P+ +T V+++SAC    L  E +    + +++   ++  V +   ++ M+ 
Sbjct: 482 DMV-LSGARPNEITFVSLLSACSYAGLVEEAERYFDM-MRNEYHIEPLVDHYGCMVDMFV 539

Query: 518 RCRDIKSA-STVFESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSI 575
           R   +  A S +  + +  N   W+ +++   S    E+      R LE +P  I    +
Sbjct: 540 RLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVL 599

Query: 576 L 576
           L
Sbjct: 600 L 600


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 176/586 (30%), Positives = 295/586 (50%), Gaps = 65/586 (11%)

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           + ++      G+  EA  +L +M +   + P  +T  +L+  C ++  L + + +H + I
Sbjct: 33  DGLVKSLCKQGRLREALHILQDM-VENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMI 91

Query: 306 RRLLG-YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
           +      D+ + N L+  Y K  SL +A  +F+ + P+ ++VSW +MI+           
Sbjct: 92  QTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM-PVKNVVSWTAMIAAYARHEHGQEA 150

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESL-EFGKSIHCWQLKLGFSNNTIGVNALMH 411
            G F EM  +  Q +  T  +ILP+C   E L EF   I    +K GF +N    N L+ 
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEI----VKGGFESNVFVGNGLVD 206

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G +  A  L  ++    D   WN +I    QNG  ++A+K F+ + ++   + + 
Sbjct: 207 MYAKRGCIEFARELFDKMPQR-DVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN- 264

Query: 472 VTLVNVISACGNLELAFE-----------------------GKSLHGLALKSLMGLDTRV 508
            T++   + CG++E A E                       G       L  +M     +
Sbjct: 265 -TMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVI 323

Query: 509 Q-NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
             NA+I+ + +   ++ A  +F++   CN+ +WN MI+ +SQN     AL+LF  ++   
Sbjct: 324 SWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVD 383

Query: 566 -EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS----- 619
            +PN  +   +L AC  L VL  G + H  V   GFQ +  + + L+ MY+ C S     
Sbjct: 384 MKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDAR 443

Query: 620 ----------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                     +A+ S+MI  Y  +G   E++ELF +M  +G++P + + + +LSAC H+G
Sbjct: 444 KVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAG 503

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVDEG QY++ M   Y + P  EH+ C++D+LGR+G   EA + I  +PI+P   +WG++
Sbjct: 504 LVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSL 563

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           LSAC  H +  +G++VA+ L  L P+N   Y+ LSN+Y A GRW D
Sbjct: 564 LSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDD 609



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 249/584 (42%), Gaps = 83/584 (14%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVN 116
           LH   +MVE GI   S+T   ++        L   +++H   I+      D SL N  V+
Sbjct: 49  LHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVS 108

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           +Y K G L  +   F  M   + VSW  +++    + + ++ L +F EM   G Q ++ +
Sbjct: 109 IYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFT 168

Query: 177 LSSAVAASA---CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
            +S + A      LGE       H   +K G+E + +V   N L+ MY++ G IE A   
Sbjct: 169 FASILPACTDLEVLGEF------HDEIVKGGFESNVFVG--NGLVDMYAKRGCIEFAREL 220

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-----------PDIATVV 282
           F  M  +DVVSWNA+I G+  NG  E+A  L  E+     +             D+   V
Sbjct: 221 FDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAV 280

Query: 283 TLISLCADSLLLREGRSVHGYA-----------IRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            L     +  L+     + GY             + +   +++  N+++  ++++  + +
Sbjct: 281 ELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEE 340

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  LF  + P  ++VSWN+MI+G            LF +M  +  + +  T   +LP+C 
Sbjct: 341 ALKLFKTM-PECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACA 399

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +   LE G   H   ++ GF ++ +  N L+ MY  CG +  A  +  R+    D++  +
Sbjct: 400 ALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQ-QDSASLS 458

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +IV    NG  +E+++ F+ M Q     PD VT V V+SAC +  L  EG+    +   
Sbjct: 459 AMIVGYAINGCSKESLELFEQM-QFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIM-- 515

Query: 500 SLMGLDTRVQNALITM--YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
                 TR  +    M  YG                        CMI    +      A 
Sbjct: 516 ------TRFYHITPAMEHYG------------------------CMIDLLGRAGCFDEAN 545

Query: 558 ELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +L   +  +P+     S+LSAC     +  G+++  H+  L  Q
Sbjct: 546 DLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQ 589



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 227/512 (44%), Gaps = 52/512 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
            L++ Y  +     +  +F E   K+VV+W AMI A   +      L FF EM + GI+ 
Sbjct: 105 KLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQP 164

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T   I+ A T +  L +    H   +K G  ++  + N  V+MYAK G +  +   F
Sbjct: 165 NHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELF 221

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG------WS---------GEQADNVS 176
             M   D VSWN +++G + N   E  L  F+E+       W+         G+  + V 
Sbjct: 222 DKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVE 281

Query: 177 LSSAVAASACL-------GELSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDI 227
           L   +     +       G +  G V  A  +   ++  P  +V   N++IS ++Q G +
Sbjct: 282 LFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKL---FQIMPERNVISWNAVISGFAQNGQV 338

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           E A + F  M   +VVSWNA+I G++ NG+ E A  L  +MQ M  ++P+  T   ++  
Sbjct: 339 EEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQ-MVDMKPNTETFAIVLPA 397

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA   +L +G   H   IR     D+L+ N+L+  Y+K  S+  A  +F+ +    D  S
Sbjct: 398 CAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMR-QQDSAS 456

Query: 348 WNSM-----ISGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL 395
            ++M     I+G  KE L L  Q  F+       T + +L +C     ++ G+    + +
Sbjct: 457 LSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQY--FDI 514

Query: 396 KLGFSNNTIGVN---ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
              F + T  +     ++ +    G    A  L+ ++    D   W  ++ AC  + +  
Sbjct: 515 MTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNID 574

Query: 453 EAIKTFKSMT--QQQNASPDSVTLVNVISACG 482
              K  + +     QN +P  V L N+ +A G
Sbjct: 575 LGEKVAQHLIALNPQNPAP-YVLLSNIYAAAG 605



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 32/233 (13%)

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ-ENSFISSALLDMYSN--------- 616
           P+  +  S+L  C     L   K +H H+    F+ ++  + + L+ +Y           
Sbjct: 62  PHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARR 121

Query: 617 ------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K+  +W++MI+AY  H  G EA+  F+EM + GI+P   +  S+L AC+   +
Sbjct: 122 VFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEV 181

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           + E   +++ +     V+   E +V +    VDM  + G ++ A E    +P Q     W
Sbjct: 182 LGE---FHDEI-----VKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP-QRDVVSW 232

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AM++    +G   + +   +L  ++   +V  + ++   Y   G  ++AVE+
Sbjct: 233 NAMIAGYVQNG---LIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVEL 282


>gi|302795440|ref|XP_002979483.1| hypothetical protein SELMODRAFT_51146 [Selaginella moellendorffii]
 gi|300152731|gb|EFJ19372.1| hypothetical protein SELMODRAFT_51146 [Selaginella moellendorffii]
          Length = 595

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 184/591 (31%), Positives = 299/591 (50%), Gaps = 44/591 (7%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N L+ +Y + G++++A R F       VVSW  ++  FA +G+F  A  L  EM L+   
Sbjct: 4   NQLLQIYVKMGNVDSAARIFPSPAAWSVVSWTCLVAAFARHGQFSRANALFREM-LLHGA 62

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD   ++ +I L      L   R++ G+     L  DL++ N+L+  YS+  SL  A  
Sbjct: 63  TPDKIALLAVIQLLQHPRDLEFARTLQGWIHEAGLSTDLVLGNALIAGYSRCQSLIDATR 122

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLY-----LCSQF--SFSTLLAILPSCNSPESLEFG 387
            F+ IA   D +SWNS+I+    E+ +     +C +   +  ++ A L +C +   LE G
Sbjct: 123 AFHRIAR-KDTISWNSIIAAHTMEIFHAMRAAICDELLPTRVSIAAALTACANLLDLESG 181

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ----RISHNSDTSCWNIVIV 443
             IH    + G   +  G+  L+HMY  CGDL AA  +        S N D S WN +I 
Sbjct: 182 VEIHALAARSGVEADVGGL--LIHMYAACGDLDAANRVFDVAMGGASINRDLSSWNSMIT 239

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDS--VTLVNVISACGNLELAFEGKSLHGLALKSL 501
           A T    ++EA+     M  Q  A  D   VT +N  +A G   +   G S+H    ++ 
Sbjct: 240 AYTDRNLWEEALSLVHQMHHQGMAFDDISFVTALNACAAAGYRGIP-HGTSVHLCVAEAG 298

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFE----SCYNCNLCTWNCMISAFSQNKAEVRAL 557
              D  ++ AL+ MYG+CRD+  A  VF+    S    +L  WN M SA +Q++   R L
Sbjct: 299 REEDVIIRTALLNMYGKCRDLCRADAVFDALRRSGQRLDLIAWNAMGSALAQHEEFERVL 358

Query: 558 ELFRHLEFE---PNEISIVSI---LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            L+  +  E   P+EIS +++   L+AC  +  L  G++IH     LGF  +  + +AL+
Sbjct: 359 TLYGEMLLEGVTPDEISFLTLVLALNACAGMAELAAGERIHRRAIDLGFDRDVGVITALI 418

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY++C                +   W++++S +   G+   AI LF  M  SG R    
Sbjct: 419 HMYASCGRLEQSQEIFHGAQEHTMFMWNALVSGFARRGQSERAIALFERMQQSGHRADAI 478

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
             +S+LSACS +GL+  G  Y+ ++L ++ + P  EH+ C++D+ GR+G+L+EA E+++ 
Sbjct: 479 GFVSILSACSQAGLIGRGCGYFASLLHDHGILPYREHYACMIDLFGRAGRLEEAEEWLRK 538

Query: 717 LPIQP-KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           +P       VW  +L ACS H D K G++ AE LF+++      Y+ ++ +
Sbjct: 539 MPAHKLSKSVWETLLGACSIHSDVKRGRRAAEELFEMQSRKSSPYVIMAKL 589



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 247/573 (43%), Gaps = 58/573 (10%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y  +   +S+  +F       VV+W  ++ A   +         F EM+  G   D
Sbjct: 6   LLQIYVKMGNVDSAARIFPSPAAWSVVSWTCLVAAFARHGQFSRANALFREMLLHGATPD 65

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              LL ++  L     L+  R +     +AG+  D  L N  +  Y++C  L  +   F 
Sbjct: 66  KIALLAVIQLLQHPRDLEFARTLQGWIHEAGLSTDLVLGNALIAGYSRCQSLIDATRAFH 125

Query: 133 GMHCADTVSWNTIMSG----CLHNNYPEKC--LLYFREMGWSGEQADNVSLSSAVAASAC 186
            +   DT+SWN+I++       H      C  LL  R           VS+++A+ A A 
Sbjct: 126 RIARKDTISWNSIIAAHTMEIFHAMRAAICDELLPTR-----------VSIAAALTACAN 174

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-----WGMTCKD 241
           L +L  G  IHAL  + G E      V   LI MY+ CGD++AA R F          +D
Sbjct: 175 LLDLESGVEIHALAARSGVE----ADVGGLLIHMYAACGDLDAANRVFDVAMGGASINRD 230

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRS 299
           + SWN++I  +     +EEA  L+H+M        DI + VT ++ CA +    +  G S
Sbjct: 231 LSSWNSMITAYTDRNLWEEALSLVHQMHHQGMAFDDI-SFVTALNACAAAGYRGIPHGTS 289

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN---DLVSWNSMISGL- 355
           VH          D+++  +L++ Y K   L +A+ +F+A+       DL++WN+M S L 
Sbjct: 290 VHLCVAEAGREEDVIIRTALLNMYGKCRDLCRADAVFDALRRSGQRLDLIAWNAMGSALA 349

Query: 356 ----FKEMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
               F+ +L L            + SF TL+  L +C     L  G+ IH   + LGF  
Sbjct: 350 QHEEFERVLTLYGEMLLEGVTPDEISFLTLVLALNACAGMAELAAGERIHRRAIDLGFDR 409

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC---WNIVIVACTQNGHFQEAIKTF 458
           +   + AL+HMY +CG L  +    Q I H +       WN ++    + G  + AI  F
Sbjct: 410 DVGVITALIHMYASCGRLEQS----QEIFHGAQEHTMFMWNALVSGFARRGQSERAIALF 465

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYG 517
           + M QQ     D++  V+++SAC    L   G       L     L  R   A +I ++G
Sbjct: 466 ERM-QQSGHRADAIGFVSILSACSQAGLIGRGCGYFASLLHDHGILPYREHYACMIDLFG 524

Query: 518 RCRDIKSASTVFES--CYNCNLCTWNCMISAFS 548
           R   ++ A         +  +   W  ++ A S
Sbjct: 525 RAGRLEEAEEWLRKMPAHKLSKSVWETLLGACS 557



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 261/611 (42%), Gaps = 75/611 (12%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L N  + +Y K G+++S+   F        VSW  +++    +    +    FREM   G
Sbjct: 2   LGNQLLQIYVKMGNVDSAARIFPSPAAWSVVSWTCLVAAFARHGQFSRANALFREMLLHG 61

Query: 170 EQADNVSLSSAVAASACLGELSYGKV----IHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
              D ++L + +       +L + +     IH  G+      S  + + N+LI+ YS+C 
Sbjct: 62  ATPDKIALLAVIQLLQHPRDLEFARTLQGWIHEAGL------STDLVLGNALIAGYSRCQ 115

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ--LMRSVEPDIATVVT 283
            +  A RAF  +  KD +SWN+II    +        ++ H M+  +   + P   ++  
Sbjct: 116 SLIDATRAFHRIARKDTISWNSIIAAHTM--------EIFHAMRAAICDELLPTRVSIAA 167

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI---A 340
            ++ CA+ L L  G  +H  A R   G +  +   L+  Y+    L  A  +F+     A
Sbjct: 168 ALTACANLLDLESGVEIHALAARS--GVEADVGGLLIHMYAACGDLDAANRVFDVAMGGA 225

Query: 341 PMN-DLVSWNSMISG-----LFKEMLYLCSQ-------FSFSTLLAILPSCNSP--ESLE 385
            +N DL SWNSMI+      L++E L L  Q       F   + +  L +C +     + 
Sbjct: 226 SINRDLSSWNSMITAYTDRNLWEEALSLVHQMHHQGMAFDDISFVTALNACAAAGYRGIP 285

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV---AAFSLLQRISHNSDTSCWNIVI 442
            G S+H    + G   + I   AL++MY  C DL    A F  L+R     D   WN + 
Sbjct: 286 HGTSVHLCVAEAGREEDVIIRTALLNMYGKCRDLCRADAVFDALRRSGQRLDLIAWNAMG 345

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSV---TLVNVISACGNLELAFEGKSLHGLALK 499
            A  Q+  F+  +  +  M   +  +PD +   TLV  ++AC  +     G+ +H  A+ 
Sbjct: 346 SALAQHEEFERVLTLYGEML-LEGVTPDEISFLTLVLALNACAGMAELAAGERIHRRAID 404

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                D  V  ALI MY  C  ++ +  +F       +  WN ++S F++     RA+ L
Sbjct: 405 LGFDRDVGVITALIHMYASCGRLEQSQEIFHGAQEHTMFMWNALVSGFARRGQSERAIAL 464

Query: 560 FRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH----LGFQENSFISSALLD 612
           F  ++      + I  VSILSAC+Q G++  G      + H    L ++E+         
Sbjct: 465 FERMQQSGHRADAIGFVSILSACSQAGLIGRGCGYFASLLHDHGILPYREH--------- 515

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                     ++ MI  +G  G+  EA E   +M     + +KS   +LL ACS    V 
Sbjct: 516 ----------YACMIDLFGRAGRLEEAEEWLRKM--PAHKLSKSVWETLLGACSIHSDVK 563

Query: 673 EGLQYYNNMLE 683
            G +    + E
Sbjct: 564 RGRRAAEELFE 574



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 219/501 (43%), Gaps = 47/501 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L    +L+  YS       +   F+    KD ++WN++I A        M     
Sbjct: 96  GLSTDLVLGNALIAGYSRCQSLIDATRAFHRIARKDTISWNSIIAAHTMEIFHAMRAAIC 155

Query: 62  GEMVEEGIRFDSTTLLIIVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            E++         T + I +ALT    +  L+ G  +H L+ ++G+ AD  +  + ++MY
Sbjct: 156 DELL--------PTRVSIAAALTACANLLDLESGVEIHALAARSGVEAD--VGGLLIHMY 205

Query: 119 AKCGDLNSSECTFS-GMHCA----DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           A CGDL+++   F   M  A    D  SWN++++     N  E+ L    +M   G   D
Sbjct: 206 AACGDLDAANRVFDVAMGGASINRDLSSWNSMITAYTDRNLWEEALSLVHQMHHQGMAFD 265

Query: 174 NVSLSSAVAASACLG--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           ++S  +A+ A A  G   + +G  +H    + G E+   V +  +L++MY +C D+  A+
Sbjct: 266 DISFVTALNACAAAGYRGIPHGTSVHLCVAEAGREED--VIIRTALLNMYGKCRDLCRAD 323

Query: 232 RAFWGMTCK----DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-- 285
             F  +       D+++WNA+    A + +FE    L  EM L+  V PD  + +TL+  
Sbjct: 324 AVFDALRRSGQRLDLIAWNAMGSALAQHEEFERVLTLYGEM-LLEGVTPDEISFLTLVLA 382

Query: 286 -SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
            + CA    L  G  +H  AI      D+ ++ +L+  Y+    L +++ +F+  A  + 
Sbjct: 383 LNACAGMAELAAGERIHRRAIDLGFDRDVGVITALIHMYASCGRLEQSQEIFHG-AQEHT 441

Query: 345 LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           +  WN+++SG            LF+ M     +      ++IL +C+    +  G     
Sbjct: 442 MFMWNALVSGFARRGQSERAIALFERMQQSGHRADAIGFVSILSACSQAGLIGRGCGYFA 501

Query: 393 WQL-KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGH 450
             L   G          ++ ++   G L  A   L+++ +H    S W  ++ AC+ +  
Sbjct: 502 SLLHDHGILPYREHYACMIDLFGRAGRLEEAEEWLRKMPAHKLSKSVWETLLGACSIHSD 561

Query: 451 FQEAIKTFKSM--TQQQNASP 469
            +   +  + +   Q + +SP
Sbjct: 562 VKRGRRAAEELFEMQSRKSSP 582



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 19/263 (7%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ---MNCLKQGR 93
           D++ WNAM +A  ++      L  +GEM+ EG+  D  + L +V AL     M  L  G 
Sbjct: 337 DLIAWNAMGSALAQHEEFERVLTLYGEMLLEGVTPDEISFLTLVLALNACAGMAELAAGE 396

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H  +I  G   D  +    ++MYA CG L  S+  F G        WN ++SG     
Sbjct: 397 RIHRRAIDLGFDRDVGVITALIHMYASCGRLEQSQEIFHGAQEHTMFMWNALVSGFARRG 456

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG-----KVIHALGIKLGYEDS 208
             E+ +  F  M  SG +AD +   S ++A +  G +  G      ++H  GI       
Sbjct: 457 QSERAIALFERMQQSGHRADAIGFVSILSACSQAGLIGRGCGYFASLLHDHGIL------ 510

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS--WNAIIDGFALNG---KFEEAFD 263
           PY      +I ++ + G +E AE     M    +    W  ++   +++    +   A +
Sbjct: 511 PYREHYACMIDLFGRAGRLEEAEEWLRKMPAHKLSKSVWETLLGACSIHSDVKRGRRAAE 570

Query: 264 LLHEMQLMRSVEPDIATVVTLIS 286
            L EMQ  +S    I   + ++S
Sbjct: 571 ELFEMQSRKSSPYVIMAKLAMLS 593


>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
 gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
          Length = 734

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 198/719 (27%), Positives = 354/719 (49%), Gaps = 49/719 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L +G  +H    ++G+  D+ L N  + MY  CG +  +   F  +   +  SW  ++S 
Sbjct: 19  LSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSA 78

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N +  + L+   +M   G + ++V+    + A + LG++  G+ IHA  + LG++  
Sbjct: 79  YAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTD 138

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             VS   +++ MYS+C  +  A++ F  +  KDVVSW AII  F+  G+   A +L  EM
Sbjct: 139 TVVS--TAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEM 196

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   V+P+ +T V +++ C     L +G  ++  AI    G D+ + ++ +  YS+  +
Sbjct: 197 DL-DGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGN 255

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           L +A+  F+ +       SWN+++              L+KEM    ++    T + +L 
Sbjct: 256 LVEAKAAFDHLRE-KSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLG 314

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C+S  +LE G+ IH    ++G   + +  +A++ MY  CG +  A +   ++S +S+  
Sbjct: 315 ACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMS-SSNVV 370

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I    Q  H+QEA+  + +M   +    D  T  +V+ AC   +   EG+++H  
Sbjct: 371 VWNALIAGYVQGEHWQEALDLYHAM-NLEGLEADIYTFSSVLGACSGAKDLSEGRAVHAR 429

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +   + +   +QN L+ M+ +C  +  A  +F    + N  +WN M++AF Q+     A
Sbjct: 430 IVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGA 489

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQENSFISSALL 611
            ELF+ +  E   P+E +  SIL+ C+      L  GK +H  +   G   +  +++ LL
Sbjct: 490 FELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLL 549

Query: 612 DMY-----SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            MY     + C               K+  +W++MI  Y  H +G  A+ELF EM   GI
Sbjct: 550 TMYLLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGI 609

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +  + +  S+L ACSH GLV  G +Y+ +M+E++ + P  EH+  ++DML R+G++ EA 
Sbjct: 610 QADEITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAE 669

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMY 767
           E  K  P      +   + S+  H  D+ +  +   LL      E +    YI+LSN +
Sbjct: 670 EVAKVFPAIKHVALMTLVSSSQVHGVDSSVVARKRLLLQGDGSCEKDTASSYIALSNSF 728



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 282/604 (46%), Gaps = 37/604 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y N      +  +F +  +++V +W  M++A  +N   +  L    +M  EGIR 
Sbjct: 43  NLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRP 102

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +S T L I+ A + +  ++ GR +H   +  G   D+ +    + MY+KC  L  ++  F
Sbjct: 103 NSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIF 162

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSW  I++       P   L  F EM   G + +  +  + +AA   +  L 
Sbjct: 163 DSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALE 222

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  ++   I  GY    +V  T   ++MYS+ G++  A+ AF  +  K   SWNAI+  
Sbjct: 223 DGDKLYKRAISCGYGADVFVGSTA--VTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRA 280

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  +G   +A  L  EM +    EPD  T V L+  C+    L EG  +H    R     
Sbjct: 281 YIQHGHISQALSLYKEMDV-HGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKP 336

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQF 366
           D L  ++++  Y+K   +  A   F  ++  N +V WN++I+G      ++E L L    
Sbjct: 337 DGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSN-VVVWNALIAGYVQGEHWQEALDLYHAM 395

Query: 367 SFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           +   L A       +L +C+  + L  G+++H   +  G        N L++M+  CG L
Sbjct: 396 NLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSL 455

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI- 478
             A  + + ++ + +T  WN ++ A  Q+G    A + FK M   +   P   T  +++ 
Sbjct: 456 TLALEMFRGMA-SRNTVSWNSMVTAFCQHGDGGGAFELFKEML-LEGGEPHEQTFTSILN 513

Query: 479 ----SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY-----GRCRDIKSASTVF 529
               SAC +L+   +GK+LH     S +  D  V   L+TMY      +C  +  A  VF
Sbjct: 514 FCSHSACSSLD---QGKALHQRITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVF 570

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
           +     N+ +W  MI  ++Q+     ALELFR +E    + +EI+  SIL AC+  G++R
Sbjct: 571 DGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVR 630

Query: 587 HGKQ 590
            G++
Sbjct: 631 VGRE 634



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 247/501 (49%), Gaps = 28/501 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ST++L  YS       +  +F     KDVV+W A+ITA  +     + L  F EM  +G+
Sbjct: 142 STAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGV 201

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + + +T + I++A T M+ L+ G  ++  +I  G  AD  + +  V MY++ G+L  ++ 
Sbjct: 202 KPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKA 261

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +    T SWN I+   + + +  + L  ++EM   G + D  +    + A + LG 
Sbjct: 262 AFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGA 321

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+ IHA   ++G  D P     +++++MY++CG IE A  AF  M+  +VV WNA+I
Sbjct: 322 LEEGERIHA---RMG--DKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALI 376

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+     ++EA DL H M L   +E DI T  +++  C+ +  L EGR+VH   + R L
Sbjct: 377 AGYVQGEHWQEALDLYHAMNL-EGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGL 435

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
              + + N L++ ++K  SL+ A  +F  +A  N  VSWNSM++             LFK
Sbjct: 436 EVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRN-TVSWNSMVTAFCQHGDGGGAFELFK 494

Query: 358 EMLYLCSQFSFSTLLAILPSCNSP--ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI- 414
           EML    +    T  +IL  C+     SL+ GK++H      G  ++      L+ MY+ 
Sbjct: 495 EMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMYLL 554

Query: 415 ----NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
                CG L  A ++   I    +   W  +IV   Q+     A++ F+ M +      D
Sbjct: 555 NALAKCGALDDARAVFDGI-RGKNVLSWTAMIVGYAQHARGDGALELFREM-ELDGIQAD 612

Query: 471 SVTLVNVISACGNLELAFEGK 491
            +T  +++ AC +  L   G+
Sbjct: 613 EITFTSILHACSHRGLVRVGR 633



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 225/496 (45%), Gaps = 46/496 (9%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D A+   L+  C  S  L +G  +H       +  D  + N+L+  Y     + KA  +F
Sbjct: 2   DSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIF 61

Query: 337 NAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESL 384
           + +   N + SW  M+S     G + E L L  Q           T L IL +C++   +
Sbjct: 62  DKLIDRN-VYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIV 441
           E G+ IH   + LG+  +T+   A++ MY  C   GD    F  L+R     D   W  +
Sbjct: 121 ETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRR----KDVVSWTAI 176

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I A +Q G  + A++ F  M       P+  T VN+++AC  ++   +G  L+  A+   
Sbjct: 177 ITAFSQLGRPRVALELFWEM-DLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCG 235

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
            G D  V +  +TMY R  ++  A   F+     +  +WN ++ A+ Q+    +AL L++
Sbjct: 236 YGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYK 295

Query: 562 HLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
            ++    EP+  + V +L AC+ LG L  G++IH     +G + +    SA++ MY+ C 
Sbjct: 296 EMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCG 352

Query: 618 -------------KSN-AAWSSMISAYGYHGKGW-EAIELFHEMCNSGIRPTKSSVISLL 662
                         SN   W+++I+ Y   G+ W EA++L+H M   G+     +  S+L
Sbjct: 353 GIEHAMTAFTKMSSSNVVVWNALIAGY-VQGEHWQEALDLYHAMNLEGLEADIYTFSSVL 411

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
            ACS +  + EG   +  ++    +         +V+M  + G L  A E  + +  +  
Sbjct: 412 GACSGAKDLSEGRAVHARIVSR-GLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNT 470

Query: 723 PGVWGAMLSACSHHGD 738
              W +M++A   HGD
Sbjct: 471 VS-WNSMVTAFCQHGD 485



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 192/406 (47%), Gaps = 26/406 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ A +   ++ +T YS       + A F     K   +WNA++ A +++  +   L  +
Sbjct: 235 GYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLY 294

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G   D+ T + ++ A + +  L++G  +H    + G   D    +  V MYAKC
Sbjct: 295 KEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKC 351

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M  ++ V WN +++G +   + ++ L  +  M   G +AD  + SS +
Sbjct: 352 GGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVL 411

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +   +LS G+ +HA  +  G E    V + N L++M+++CG +  A   F GM  ++
Sbjct: 412 GACSGAKDLSEGRAVHARIVSRGLE--VVVPLQNGLVNMFAKCGSLTLALEMFRGMASRN 469

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRS 299
            VSWN+++  F  +G    AF+L  EM L+   EP   T  ++++ C+ S    L +G++
Sbjct: 470 TVSWNSMVTAFCQHGDGGGAFELFKEM-LLEGGEPHEQTFTSILNFCSHSACSSLDQGKA 528

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFY-----SKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +H       +  D  +   L+  Y     +K  +L  A  +F+ I   N ++SW +MI G
Sbjct: 529 LHQRITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIRGKN-VLSWTAMIVG 587

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
                       LF+EM     Q    T  +IL +C+    +  G+
Sbjct: 588 YAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGR 633



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 8/238 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +P    L+  ++       +L +F    +++ V+WN+M+TA  ++         
Sbjct: 433 RGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFEL 492

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNC--LKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           F EM+ EG      T   I++  +   C  L QG+ +H     +G+ +D ++    + MY
Sbjct: 493 FKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTMY 552

Query: 119 -----AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
                AKCG L+ +   F G+   + +SW  ++ G   +   +  L  FREM   G QAD
Sbjct: 553 LLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQAD 612

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            ++ +S + A +  G +  G+      ++  +  +P     N ++ M ++ G +  AE
Sbjct: 613 EITFTSILHACSHRGLVRVGREYFRSMVE-DHAIAPSAEHYNVVMDMLARAGRVGEAE 669


>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
 gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 279/529 (52%), Gaps = 38/529 (7%)

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           +L  D   L  G+ +H + ++     ++ + N L+  YSK  SL  A+ +F+ +    D 
Sbjct: 75  NLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMR-RRDS 133

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS--PESLEFGKSIH 391
           +SW+ MI+G            L+K M      F+FS   A+L +C+S  P +LE GK IH
Sbjct: 134 ISWSKMIAGYVRHGLAREAIKLYKAMAIDPDGFTFS---AVLNACSSLGPRALEVGKEIH 190

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
               ++    +    +AL+ M+  CG L  +  +        D   WN +IVA +Q+GH 
Sbjct: 191 AHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWK-DVLFWNSMIVAYSQSGHP 249

Query: 452 QEAIKTFKSM-TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
           +EAI+ FKSM +      P+++T   V++AC  +E   +GK +H   + +    D   +N
Sbjct: 250 REAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAEN 309

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           +L+ MY +C  I  A  VF+      + +W  +ISA+ +      AL+L+R +     EP
Sbjct: 310 SLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEP 369

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           N I+  S+LSAC+ LG L  GK +H  +   G++ +  +++AL+ +Y  C          
Sbjct: 370 NGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVF 429

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                ++  +W++MISAY +H    EAI+L+  M   G++ +     ++L+ACS +GL++
Sbjct: 430 DRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLE 489

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
               Y+  +  +     + E +VC+  +LGR+G+L EA E +  +P + +   W  +L+A
Sbjct: 490 SARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAA 549

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           C  H D + G +VAE+LF+LEP N   Y+ LSN+YVA GR ++A  + +
Sbjct: 550 CKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRR 598



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 221/425 (52%), Gaps = 28/425 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           GEL+ GK IH   +K GY ++ YV   N L+ MYS+CG +E A++ F GM  +D +SW+ 
Sbjct: 81  GELAAGKKIHEHVVKNGYYENVYVG--NHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSK 138

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD--SLLLREGRSVHGYAI 305
           +I G+  +G   EA  L   M    +++PD  T   +++ C+      L  G+ +H +  
Sbjct: 139 MIAGYVRHGLAREAIKLYKAM----AIDPDGFTFSAVLNACSSLGPRALEVGKEIHAHMK 194

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEML 360
           R  L  D+ + ++L+  ++K  SL ++  +F+      D++ WNSMI     SG  +E +
Sbjct: 195 RIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCR-WKDVLFWNSMIVAYSQSGHPREAI 253

Query: 361 YLCSQFSFS---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
            L      S         T   +L +C++ E LE GK +H   +  GF  +    N+L++
Sbjct: 254 ELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVN 313

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A  +   +   +  S W  +I A  + GH +EA+  ++ M   +   P+ 
Sbjct: 314 MYAKCGSITEAREVFDGMKQRTVVS-WTGIISAYVRKGHPREALDLYRKMG-SEGVEPNG 371

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +T  +V+SAC +L    EGK++H     +    D  V NAL+++YG+C  + SA  VF+ 
Sbjct: 372 ITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDR 431

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIV---SILSACTQLGVLRHG 588
               N+ +W  MISA++ ++    A++L++ ++ E  + S     ++L+AC+Q G+L   
Sbjct: 432 MKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESA 491

Query: 589 KQIHG 593
           +   G
Sbjct: 492 RHYFG 496



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 237/525 (45%), Gaps = 53/525 (10%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G+ +H   +K G   +  + N  V MY+KCG L  ++  F GM   D++SW+ +++G
Sbjct: 83  LAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAG 142

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGYE 206
            + +    + +  ++ M       D  + S+ + A + LG   L  GK IHA   ++  +
Sbjct: 143 YVRHGLAREAIKLYKAMAI---DPDGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLK 199

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
             P V V ++L++M+++CG ++ +   F     KDV+ WN++I  ++ +G   EA +L  
Sbjct: 200 --PDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFK 257

Query: 267 EM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            M      VEP+  T  T+++ C+    L +G+ VH   +     +D    NSL++ Y+K
Sbjct: 258 SMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAK 317

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             S+++A  +F+ +     +VSW  +IS             L+++M     + +  T  +
Sbjct: 318 CGSITEAREVFDGM-KQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFAS 376

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C+S  +LE GK++H      G+  +    NAL+ +Y  CG + +A  +  R+   +
Sbjct: 377 VLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRN 436

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             S W  +I A   + H +EAI+ +K+M   +     S     V++AC    L    +  
Sbjct: 437 VVS-WTAMISAYAHHRHSEEAIQLYKAM-DLEGVQASSFIYGTVLTACSQAGLLESARHY 494

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            G                        RD  + +          L  + CM +   +    
Sbjct: 495 FGCL---------------------TRDCGAPA---------KLEDYVCMATVLGRAGRL 524

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
             A EL   + FE   ++ + +L+AC     +  G ++   +F L
Sbjct: 525 AEAEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRL 569



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 223/511 (43%), Gaps = 39/511 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++     L+  YS     E +  +F     +D ++W+ MI   V +      +  +
Sbjct: 97  GYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREAIKLY 156

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +   F  + +L   S+L     L+ G+ +H    +  +  D  + +  V M+AKC
Sbjct: 157 KAMAIDPDGFTFSAVLNACSSLGP-RALEVGKEIHAHMKRIWLKPDVFVDSALVTMFAKC 215

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSS 179
           G L  S   F      D + WN+++     + +P + +  F+ MG S    + + ++ ++
Sbjct: 216 GSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTT 275

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +AA + + +L  GK +H   +  G++     +  NSL++MY++CG I  A   F GM  
Sbjct: 276 VLAACSAVEDLEQGKEVHRQMVDAGFQFD--AAAENSLVNMYAKCGSITEAREVFDGMKQ 333

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + VVSW  II  +   G   EA DL  +M     VEP+  T  +++S C+    L EG++
Sbjct: 334 RTVVSWTGIISAYVRKGHPREALDLYRKMG-SEGVEPNGITFASVLSACSSLGALEEGKA 392

Query: 300 VHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           VH  A  +  GY  DL + N+L+  Y K  S+  A  +F+ +  + ++VSW +MIS    
Sbjct: 393 VH--AQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRM-KIRNVVSWTAMISAYAH 449

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    L+K M     Q S      +L +C+    LE  +         G      G
Sbjct: 450 HRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHY------FGCLTRDCG 503

Query: 406 VNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             A +  Y+         G L  A  LL  +   ++   W  ++ AC  +   +   +  
Sbjct: 504 APAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVA 563

Query: 459 KSMTQQQ--NASPDSVTLVNVISACGNLELA 487
           + + + +  N +P  V L N+  A G  E A
Sbjct: 564 EVLFRLEPLNEAP-YVLLSNIYVAAGRQEEA 593



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 19/315 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        SL+  Y+       +  +F     + VV+W  +I+A V        L  +
Sbjct: 300 GFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLY 359

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T   ++SA + +  L++G+ VH     AG   D ++ N  V++Y KC
Sbjct: 360 RKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKC 419

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++S+   F  M   + VSW  ++S   H+ + E+ +  ++ M   G QA +    + +
Sbjct: 420 GSVDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVL 479

Query: 182 AASACLGELS-----YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            A +  G L      +G +    G     ED  YV +   L     + G +  AE     
Sbjct: 480 TACSQAGLLESARHYFGCLTRDCGAPAKLED--YVCMATVL----GRAGRLAEAEELLAV 533

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           M  + + V+W  ++     +   E    +    +++  +EP       L+S    ++ + 
Sbjct: 534 MPFEAEFVAWMGLLAACKAHNDVERGARV---AEVLFRLEPLNEAPYVLLS----NIYVA 586

Query: 296 EGRSVHGYAIRRLLG 310
            GR      +RR +G
Sbjct: 587 AGRQEEAARVRRKMG 601


>gi|242039301|ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
 gi|241920899|gb|EER94043.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
          Length = 564

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 268/530 (50%), Gaps = 42/530 (7%)

Query: 288 CADSLLLREGRSVHGYAIRRLL-----GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           C  +  +R GR++H     RLL          + N L+  YS     + A  +F  + P 
Sbjct: 27  CGRTGDIRRGRALHA----RLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVL-PR 81

Query: 343 NDLVSWNSMISGLFKEMLYLCSQFSFSTLLA--ILPS----------CNSPESLEFGKSI 390
            + VSW +++SGL +  ++  +  +F+ +    + P+            +  +   G  +
Sbjct: 82  PNPVSWTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQL 141

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           HC   + GF       + L  MY  CG L  A  +  ++ H  D   W  +I    +NG 
Sbjct: 142 HCIGTRFGFDTELFVASNLADMYSKCGLLDEACRVFDQMPHR-DAVTWTTMIDGYAKNGS 200

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            + AI  F+ M  +     D     + +SA G L+  + G+SLH   +K+   L+T V+N
Sbjct: 201 LKAAILAFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRN 260

Query: 511 ALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FE 566
           AL+ MY +  D++SAS V +      N+ +   +I  + +      ALE +  L     E
Sbjct: 261 ALLDMYAKSGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVE 320

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           PNE +  S++  C    +L  G Q+H  V       +SF+ S L+ MY  C         
Sbjct: 321 PNEFTFASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQL 380

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                  S  AW+++I+ Y  HG GW AI+ F  M  SGIRP   + + LL+ACSH+GLV
Sbjct: 381 FNEIGYHSEVAWNAVINVYAQHGHGWGAIQAFDRMTASGIRPNHITFVCLLTACSHAGLV 440

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           DEGL+Y+ +M + + + P+ EH+ CI+DM GR+G+L EA +FI  +P++P    W ++L 
Sbjct: 441 DEGLEYFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLG 500

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AC   G+ ++G+  A+ L KL+P+N G ++SLS +Y +LG+W+DA  + K
Sbjct: 501 ACRMRGNKELGEIAAQNLMKLDPDNTGIHVSLSGIYASLGQWEDAKSVRK 550



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 239/525 (45%), Gaps = 29/525 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           +++GR +H   +  G  A S+ L N  + MY+ C D  S+   F  +   + VSW T++S
Sbjct: 33  IRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPVSWTTLVS 92

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G + N+     L  F  M  +       +LSSA  A+A L     G  +H +G + G++ 
Sbjct: 93  GLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIGTRFGFDT 152

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +V+  ++L  MYS+CG ++ A R F  M  +D V+W  +IDG+A NG  + A     +
Sbjct: 153 ELFVA--SNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAILAFRD 210

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+    V  D     + +S          GRS+H   I+     + ++ N+L+D Y+KS 
Sbjct: 211 MKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAKSG 270

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAIL 375
            L  A  +        ++VS  S+I G       +E L   ++           T  +++
Sbjct: 271 DLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFTFASMI 330

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
             C   + LE G  +H   +K    +++   + L++MY  CG +  +  L   I ++S+ 
Sbjct: 331 KGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHSEV 390

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           + WN VI    Q+GH   AI+ F  MT      P+ +T V +++AC +  L  EG   + 
Sbjct: 391 A-WNAVINVYAQHGHGWGAIQAFDRMT-ASGIRPNHITFVCLLTACSHAGLVDEGLE-YF 447

Query: 496 LALKSLMGLDTRVQN--ALITMYGRCRDIKSAST-VFESCYNCNLCTWNCMISA--FSQN 550
            ++K   G++ + ++   +I MYGR   +  A   + E     N   W  ++ A     N
Sbjct: 448 YSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGN 507

Query: 551 K--AEVRALELFRHLEFEPNEISI-VSILSACTQLGVLRHGKQIH 592
           K   E+ A  L   ++ +P+   I VS+      LG     K + 
Sbjct: 508 KELGEIAAQNL---MKLDPDNTGIHVSLSGIYASLGQWEDAKSVR 549



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 205/461 (44%), Gaps = 35/461 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+T YS  +   S++ +F      + V+W  +++  V+N      L  F  M    +   
Sbjct: 59  LITMYSYCADAASAVRVFGVLPRPNPVSWTTLVSGLVQNSMHHDALAAFAAMRRAHVAPT 118

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              L     A   ++  + G  +HC+  + G   +  + +   +MY+KCG L+ +   F 
Sbjct: 119 QFALSSAARAAAALSAPRPGTQLHCIGTRFGFDTELFVASNLADMYSKCGLLDEACRVFD 178

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELS 191
            M   D V+W T++ G   N   +  +L FR+M   G   AD     SA++AS  L +  
Sbjct: 179 QMPHRDAVTWTTMIDGYAKNGSLKAAILAFRDMKCEGLVGADQHVFCSALSASGGLKDGW 238

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF------WGMTCKDVVSW 245
           +G+ +H   IK G+E      V N+L+ MY++ GD+E+A R        W     +VVS 
Sbjct: 239 FGRSLHCCIIKAGFELE--TVVRNALLDMYAKSGDLESASRVVKIDPGGW-----NVVSG 291

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            ++IDG+    + EEA +   E+   + VEP+  T  ++I  CA   LL +G  +H   I
Sbjct: 292 TSLIDGYIEVDRIEEALETYTELG-RQGVEPNEFTFASMIKGCAMQDLLEQGAQLHAQVI 350

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
           +  L  D  + ++L+  Y K   +S +  LFN I   ++ V+WN++I+            
Sbjct: 351 KTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHSE-VAWNAVINVYAQHGHGWGAI 409

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSP----ESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             F  M     + +  T + +L +C+      E LE+  S+   +   G        + +
Sbjct: 410 QAFDRMTASGIRPNHITFVCLLTACSHAGLVDEGLEYFYSM---KDAHGIEPKEEHYSCI 466

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           + MY   G L  A   +  +    +   W  ++ AC   G+
Sbjct: 467 IDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGN 507



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 161/361 (44%), Gaps = 20/361 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +++L   YS     + +  +F +  ++D VTW  MI    +N  +   +  F
Sbjct: 149 GFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAILAF 208

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        +  SAL+    LK    GR +HC  IKAG   ++ + N  ++MY
Sbjct: 209 RDMKCEGLV--GADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY-----PEKCLLYFREMGWSGEQAD 173
           AK GDL S+          D   WN +    L + Y      E+ L  + E+G  G + +
Sbjct: 267 AKSGDLESASRVVK----IDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPN 322

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             + +S +   A    L  G  +HA  IK       +V  T  L+ MY +CG I  + + 
Sbjct: 323 EFTFASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGST--LVYMYGKCGLISLSLQL 380

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +     V+WNA+I+ +A +G    A      M     + P+  T V L++ C+ + L
Sbjct: 381 FNEIGYHSEVAWNAVINVYAQHGHGWGAIQAFDRMT-ASGIRPNHITFVCLLTACSHAGL 439

Query: 294 LREGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + EG   + Y+++   G +      + ++D Y ++  L +AE   + +    +   W S+
Sbjct: 440 VDEGLE-YFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSL 498

Query: 352 I 352
           +
Sbjct: 499 L 499


>gi|302783475|ref|XP_002973510.1| hypothetical protein SELMODRAFT_99647 [Selaginella moellendorffii]
 gi|300158548|gb|EFJ25170.1| hypothetical protein SELMODRAFT_99647 [Selaginella moellendorffii]
          Length = 675

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 193/646 (29%), Positives = 314/646 (48%), Gaps = 49/646 (7%)

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           VSL    A S  L E   GK IH     L  E +  +S+ +SL+ MY QCG ++ A  AF
Sbjct: 15  VSLIKHCAQSKSLAE---GKCIHQQVRTLDLEGN--LSIGSSLLKMYLQCGSLDGARVAF 69

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS----LCAD 290
             M   +  SWNA I  FA  G + EA  +   M+ + SV P+  T+VT+++    L  D
Sbjct: 70  TRMDLTEPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLD 129

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              L   R +H   + +    D  +  SLM  Y +   L +AE +F ++    D VSW+ 
Sbjct: 130 FKSLAIAREIHTTILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLG-FKDRVSWSV 188

Query: 351 MIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MIS            G F+EM +   + +    + +L +  SP  L  G+ IH   ++ G
Sbjct: 189 MISAYAHNGRKDLALGFFREMQFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAG 248

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
             N  I   AL+ MY  CG   A+  + +R ++  D   WN +I A   NG F+++++ F
Sbjct: 249 MQNKVILATALITMYGRCGSPAASIRVFRR-TNPKDLILWNSMIGAYAHNGEFEKSMRIF 307

Query: 459 KSMTQQQNASPDSVTLVNVISACGNL-ELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
             + +   A+P+ VT + ++   G   E A   K +        +G D  V  AL++ YG
Sbjct: 308 HQLLK---AAPNRVTFLTLLGGLGTSNENARHAKVVEREITSRGLGTDAVVATALVSAYG 364

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
           +C     A  +F+     N+ +WN MISA++ +     AL+L+  +  E   P  ++ V+
Sbjct: 365 KCGHAGEARRIFDGIEPRNVVSWNSMISAYAHSHRHELALDLYHRMLHEGVNPTVVTFVA 424

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
            L AC++L  +  G +I   V   GF+ +  + +A++DMY  C               K 
Sbjct: 425 ALGACSELADVAEGGKIISCVTDSGFELDHVLGTAVVDMYGKCGNLRRAREIFDGMKKKD 484

Query: 620 NAAWSSMISAYGYHGKGWE----AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
              WS++ +AY +HG        A+++FH M   G+RP   + + +LSAC ++GLVD+G 
Sbjct: 485 VVVWSALAAAYSHHGTDRSQLHTALKVFHWMQQEGVRPGSVAFLGVLSACRNAGLVDQGC 544

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
            Y++++  ++ +   +E   C+VD+LGR+G L EA      +        W  +L AC  
Sbjct: 545 AYFSSITSDHGLEVTSEQLGCVVDLLGRAGWLAEAEALAARMAGGGDSCAWMMLLGACRD 604

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             D +  K+ AE + + +P+N   Y+ LS +Y A GR  DA  + +
Sbjct: 605 GRDVERAKRAAERVLERDPKNAMAYVMLSQVYAAEGRMDDARSVRR 650



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 241/526 (45%), Gaps = 39/526 (7%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
            +L   +SLL  Y      + +   F      +  +WNA I A  +       +  F  M
Sbjct: 44  GNLSIGSSLLKMYLQCGSLDGARVAFTRMDLTEPESWNAAIAAFAQEGHYSEAMKVFERM 103

Query: 65  VEEG-IRFDSTTLLIIVSALT----QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            E G +  +S T++ +++ L         L   R +H   +      D+ +    +++Y 
Sbjct: 104 KELGSVAPNSITIVTVLNVLKLLPLDFKSLAIAREIHTTILAKKKEMDACVATSLMSLYG 163

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           + G L  +E  F  +   D VSW+ ++S   HN   +  L +FREM + G + + +   +
Sbjct: 164 RFGCLPEAESIFQSLGFKDRVSWSVMISAYAHNGRKDLALGFFREMQFEGMKPNQIVFVN 223

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A    G+L  G+ IH+L I+ G ++   V +  +LI+MY +CG   A+ R F     
Sbjct: 224 VLNALGSPGDLLDGERIHSLVIQAGMQNK--VILATALITMYGRCGSPAASIRVFRRTNP 281

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-SLCADSLLLREGR 298
           KD++ WN++I  +A NG+FE++  + H  QL+++  P+  T +TL+  L   +   R  +
Sbjct: 282 KDLILWNSMIGAYAHNGEFEKSMRIFH--QLLKAA-PNRVTFLTLLGGLGTSNENARHAK 338

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            V      R LG D ++  +L+  Y K     +A  +F+ I P N +VSWNSMIS     
Sbjct: 339 VVEREITSRGLGTDAVVATALVSAYGKCGHAGEARRIFDGIEPRN-VVSWNSMISAYAHS 397

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIG 405
                   L+  ML+     +  T +A L +C+   +  E GK I C     GF  + + 
Sbjct: 398 HRHELALDLYHRMLHEGVNPTVVTFVAALGACSELADVAEGGKIISCVT-DSGFELDHVL 456

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG----HFQEAIKTFKSM 461
             A++ MY  CG+L  A  +   +    D   W+ +  A + +G        A+K F  M
Sbjct: 457 GTAVVDMYGKCGNLRRAREIFDGMK-KKDVVVWSALAAAYSHHGTDRSQLHTALKVFHWM 515

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEG-------KSLHGLALKS 500
            QQ+   P SV  + V+SAC N  L  +G        S HGL + S
Sbjct: 516 -QQEGVRPGSVAFLGVLSACRNAGLVDQGCAYFSSITSDHGLEVTS 560



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 228/501 (45%), Gaps = 47/501 (9%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I+  V+LI  CA S  L EG+ +H       L  +L + +SL+  Y +  SL  A + F 
Sbjct: 11  ISRYVSLIKHCAQSKSLAEGKCIHQQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFT 70

Query: 338 AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL-------------------LAILPSC 378
            +  + +  SWN+ I+   +E  Y  +   F  +                   L +LP  
Sbjct: 71  RM-DLTEPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPL- 128

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              +SL   + IH   L      +     +LM +Y   G L  A S+ Q +    D   W
Sbjct: 129 -DFKSLAIAREIHTTILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLGFK-DRVSW 186

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           +++I A   NG    A+  F+ M Q +   P+ +  VNV++A G+     +G+ +H L +
Sbjct: 187 SVMISAYAHNGRKDLALGFFREM-QFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVI 245

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           ++ M     +  ALITMYGRC    ++  VF      +L  WN MI A++ N    +++ 
Sbjct: 246 QAGMQNKVILATALITMYGRCGSPAASIRVFRRTNPKDLILWNSMIGAYAHNGEFEKSMR 305

Query: 559 LFRH-LEFEPNEISIVSILSAC-TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           +F   L+  PN ++ +++L    T     RH K +   +   G   ++ +++AL+  Y  
Sbjct: 306 IFHQLLKAAPNRVTFLTLLGGLGTSNENARHAKVVEREITSRGLGTDAVVATALVSAYGK 365

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               ++  +W+SMISAY +  +   A++L+H M + G+ PT  + ++ 
Sbjct: 366 CGHAGEARRIFDGIEPRNVVSWNSMISAYAHSHRHELALDLYHRMLHEGVNPTVVTFVAA 425

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEH--HVCIVDMLGRSGKLQEAYEFIKNLPI 719
           L ACS    V EG +  + +    D   E +H     +VDM G+ G L+ A E    +  
Sbjct: 426 LGACSELADVAEGGKIISCVT---DSGFELDHVLGTAVVDMYGKCGNLRRAREIFDGMK- 481

Query: 720 QPKPGVWGAMLSACSHHGDTK 740
           +    VW A+ +A SHHG  +
Sbjct: 482 KKDVVVWSALAAAYSHHGTDR 502



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 230/530 (43%), Gaps = 33/530 (6%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            Q   L +G+ +H       +  + S+ +  + MY +CG L+ +   F+ M   +  SWN
Sbjct: 22  AQSKSLAEGKCIHQQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFTRMDLTEPESWN 81

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACL----GELSYGKVIHA 198
             ++      +  + +  F  M   G  A N +++ + +     L      L+  + IH 
Sbjct: 82  AAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLAIAREIHT 141

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
               L  +      V  SL+S+Y + G +  AE  F  +  KD VSW+ +I  +A NG+ 
Sbjct: 142 --TILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLGFKDRVSWSVMISAYAHNGRK 199

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           + A     EMQ    ++P+    V +++       L +G  +H   I+  +   +++  +
Sbjct: 200 DLALGFFREMQF-EGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNKVILATA 258

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF------- 366
           L+  Y +  S + +  +F    P  DL+ WNSMI     +G F++ + +  Q        
Sbjct: 259 LITMYGRCGSPAASIRVFRRTNP-KDLILWNSMIGAYAHNGEFEKSMRIFHQLLKAAPNR 317

Query: 367 -SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
            +F TLL  L + N  E+    K +       G   + +   AL+  Y  CG    A  +
Sbjct: 318 VTFLTLLGGLGTSN--ENARHAKVVEREITSRGLGTDAVVATALVSAYGKCGHAGEARRI 375

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              I   +  S WN +I A   +   + A+  +  M   +  +P  VT V  + AC  L 
Sbjct: 376 FDGIEPRNVVS-WNSMISAYAHSHRHELALDLYHRML-HEGVNPTVVTFVAALGACSELA 433

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
              EG  +      S   LD  +  A++ MYG+C +++ A  +F+     ++  W+ + +
Sbjct: 434 DVAEGGKIISCVTDSGFELDHVLGTAVVDMYGKCGNLRRAREIFDGMKKKDVVVWSALAA 493

Query: 546 AFSQNKAEVR----ALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           A+S +  +      AL++F  ++ E   P  ++ + +LSAC   G++  G
Sbjct: 494 AYSHHGTDRSQLHTALKVFHWMQQEGVRPGSVAFLGVLSACRNAGLVDQG 543



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       +T+L++AY    +   +  +F     ++VV+WN+MI+A   +    + L  
Sbjct: 347 RGLGTDAVVATALVSAYGKCGHAGEARRIFDGIEPRNVVSWNSMISAYAHSHRHELALDL 406

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +  M+ EG+     T +  + A +++ +  + G+++ C++  +G   D  L    V+MY 
Sbjct: 407 YHRMLHEGVNPTVVTFVAALGACSELADVAEGGKIISCVT-DSGFELDHVLGTAVVDMYG 465

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           KCG+L  +   F GM   D V W+ + +   H+ 
Sbjct: 466 KCGNLRRAREIFDGMKKKDVVVWSALAAAYSHHG 499


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 272/518 (52%), Gaps = 34/518 (6%)

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           SL  DS+       ++   +   L Y   ++  L++  S    +S A  LF+   P  D+
Sbjct: 80  SLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKF-PDPDV 138

Query: 346 VSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCW 393
             WN+++      G F   + + ++   +       +   +L +C++  +LE G+ +H  
Sbjct: 139 FLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQ 198

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
             + GF ++    N L+ +Y  CG++V A ++  R+   +  S W  +I    QNG   E
Sbjct: 199 IFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVS-WTSIISGYAQNGQPIE 257

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A++ F  M ++ N  PD + LV+V+ A  ++E    GKS+HG  +K  +  +  +  +L 
Sbjct: 258 ALRIFSEM-RKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLT 316

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
           ++Y +C  +  A   F    N +L  WN MIS + +N     A+ELFR ++     P+ I
Sbjct: 317 SLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSI 376

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           ++ S ++AC Q+G L   + +  ++    F+ +  ++++L+D Y+ C             
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRI 436

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K    WS+M+  YG HG+G E+I LFH M  +G+ P   + + LL+AC +SGLV+EG 
Sbjct: 437 PDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGW 496

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
             ++ M  +Y + P  +H+ C+VD+LGR+G L  AY F+ N+PI+P   VWGA+LSAC  
Sbjct: 497 DLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKI 555

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           H    +G+  AE LF L+P N G+Y+ LSN+Y +   W
Sbjct: 556 HRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLW 593



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 200/451 (44%), Gaps = 16/451 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
            L+   SN+     +  LF +  + DV  WNA++     +      +  +  M    +  
Sbjct: 112 KLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSP 171

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  +   ++ A + +  L+ GR VH    + G  +D  + N  V +YAKCG++  +   F
Sbjct: 172 DGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVF 231

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +     VSW +I+SG   N  P + L  F EM  +  + D ++L S + A   + +L 
Sbjct: 232 GRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLE 291

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK IH   IK+G E      +  SL S+Y++CG +  A   F  +    ++ WNA+I G
Sbjct: 292 HGKSIHGCVIKMGLECE--FDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISG 349

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  NG  EEA +L   M+  +++ PD  TV + I+ CA    L   R +  Y        
Sbjct: 350 YVKNGYAEEAIELFRLMK-SKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRN 408

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           D+++  SL+D Y+K  S+  A  +F+ I P  D+V W++M+ G            LF  M
Sbjct: 409 DVIVNTSLIDTYAKCGSVDMARFVFDRI-PDKDVVVWSAMMVGYGLHGQGRESIILFHAM 467

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                  +  T + +L +C +   +E G  +       G          ++ +    G L
Sbjct: 468 RQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHL 527

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
             A++ +  +      S W  ++ AC  + H
Sbjct: 528 DRAYNFVMNMPIEPGVSVWGALLSACKIHRH 558



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 151/296 (51%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +     L+  Y+       + A+F    ++ +V+W ++I+   +N   +  L  F
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM +  +R D   L+ ++ A T +  L+ G+ +H   IK G+  +  L     ++YAKC
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ +     + WN ++SG + N Y E+ +  FR M     + D+++++S++
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           AA A +G L   + +        + +   V V  SLI  Y++CG ++ A   F  +  KD
Sbjct: 383 AACAQIGSLELARWMDEYISMSEFRND--VIVNTSLIDTYAKCGSVDMARFVFDRIPDKD 440

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           VV W+A++ G+ L+G+  E+  L H M+    V P+  T V L++ C +S L+ EG
Sbjct: 441 VVVWSAMMVGYGLHGQGRESIILFHAMR-QAGVSPNDVTFVGLLTACKNSGLVEEG 495


>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 169/544 (31%), Positives = 282/544 (51%), Gaps = 52/544 (9%)

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--------LLMMNSLMDFYSKSNSLS 330
           A + +L++LC     L  G S+H   I++   +D        L + NSL+  YSK     
Sbjct: 35  ADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFR 94

Query: 331 KAELLFNAIAPMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAIL 375
            A  +F+ + P+ D VSWN+MISG             FK+M     +C +F  +TL  +L
Sbjct: 95  NAGNVFDYM-PVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTML 153

Query: 376 PSCNSPE---SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
             C+      S    + IH      GF       NAL+  Y  C        +   +   
Sbjct: 154 SGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIER 213

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            +   W  VI    QN  ++++++ F  M    + SP+ +T ++ + AC  L++  +G+ 
Sbjct: 214 -NVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQK 272

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HGL  K  M  D  +++AL+ +Y +C  + +A  +FES    +  +   ++ AF+QN  
Sbjct: 273 IHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGF 332

Query: 553 EVRALELFRHL-----EFEPNEIS-IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           E  A+++F  +     E + N +S ++ +    T L +   GKQIH  +    F EN F+
Sbjct: 333 EEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLAL---GKQIHSLIIKKNFCENPFV 389

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L++MYS C               K++ +W+S+I+A+  HG G++A++ + EM   G+
Sbjct: 390 GNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGV 449

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            PT  + +SLL ACSH+GLV++G++   +M  ++ + P +EH+ C+VDMLGR+G L EA 
Sbjct: 450 APTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAK 509

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           +FI+ LP      VW A+L ACS HGD++MGK  A+ LF   P +   Y+ ++N+Y + G
Sbjct: 510 KFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEG 569

Query: 772 RWKD 775
            WK+
Sbjct: 570 NWKE 573



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 206/430 (47%), Gaps = 32/430 (7%)

Query: 190 LSYGKVIHALGIK----LGYEDSPY--VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
           L+ G  IHA  IK      ++ S    + + NSL+SMYS+CG+   A   F  M  +D V
Sbjct: 50  LTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTV 109

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSV--EPDIATVVTLISLCADSLLLREGRSV- 300
           SWN +I GF  NG F+ +F    +M     V    D AT+ T++S C D L L    SV 
Sbjct: 110 SWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGC-DGLRLGISTSVT 168

Query: 301 ---HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
              HG         ++ + N+L+  Y K    S+   +F+ +   N +V+W ++ISGL +
Sbjct: 169 QMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERN-VVTWTAVISGLAQ 227

Query: 358 EMLYLCSQFSFS-------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
              Y  S   F+             T L+ L +C+  + L  G+ IH    KLG  ++  
Sbjct: 228 NEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLC 287

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             +ALM +Y  CG L AA+ + +  +   D     +++VA  QNG  +EAI+ F  M   
Sbjct: 288 IESALMDLYSKCGSLDAAWQIFES-AEELDGVSLTVILVAFAQNGFEEEAIQIFTKMV-A 345

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
                D+  +  V+   G       GK +H L +K     +  V N L+ MY +C D+  
Sbjct: 346 LGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSD 405

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQ 581
           +  VF      N  +WN +I+AF+++    +AL+ +  +  E   P +++ +S+L AC+ 
Sbjct: 406 SLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSH 465

Query: 582 LGVLRHGKQI 591
            G++  G ++
Sbjct: 466 AGLVEKGMEL 475



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 225/461 (48%), Gaps = 37/461 (8%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE- 170
           N  ++MY+KCG+  ++   F  M   DTVSWNT++SG L N   +    +F++M  S   
Sbjct: 81  NSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRV 140

Query: 171 --QADNVSLSSAVAASACLG-----ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ 223
             + D  +L++ +  S C G       S  ++IH L    G+E    ++V N+LI+ Y +
Sbjct: 141 CCRFDKATLTTML--SGCDGLRLGISTSVTQMIHGLVFVGGFERE--ITVGNALITSYFK 196

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
           C       + F  M  ++VV+W A+I G A N  +E++  L  +M+   SV P++ T ++
Sbjct: 197 CECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLS 256

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
            +  C+   +LR+G+ +HG   +  +  DL + ++LMD YSK  SL  A  +F +   + 
Sbjct: 257 SLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEEL- 315

Query: 344 DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           D VS   ++              +F +M+ L  +   + + A+L        L  GK IH
Sbjct: 316 DGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIH 375

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              +K  F  N    N L++MY  CGDL  +  +  +++  +  S WN VI A  ++G  
Sbjct: 376 SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVS-WNSVIAAFARHGDG 434

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRV 508
            +A++ ++ M + +  +P  VT ++++ AC +  L  +G  L    L+S+    G+  R 
Sbjct: 435 FKALQFYEEM-RVEGVAPTDVTFLSLLHACSHAGLVEKGMEL----LESMTNDHGISPRS 489

Query: 509 QN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           ++   ++ M GR   +  A    E    +  +  W  ++ A
Sbjct: 490 EHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGA 530



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 17/388 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T+Y     F     +F E   ++VVTW A+I+   +N      L  F
Sbjct: 179 GFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLF 238

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M   G +  +  T L  + A + +  L+ G+ +H L  K GM +D  + +  +++Y+K
Sbjct: 239 AQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSK 298

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+++   F      D VS   I+     N + E+ +  F +M   G + D   +S+ 
Sbjct: 299 CGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAV 358

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +        L+ GK IH+L IK  + ++P+V   N L++MYS+CGD+  +   F+ MT K
Sbjct: 359 LGVFGVGTYLALGKQIHSLIIKKNFCENPFVG--NGLVNMYSKCGDLSDSLLVFYQMTQK 416

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + VSWN++I  FA +G   +A     EM++   V P   T ++L+  C+ + L+ +G  +
Sbjct: 417 NSVSWNSVIAAFARHGDGFKALQFYEEMRV-EGVAPTDVTFLSLLHACSHAGLVEKGMEL 475

Query: 301 -------HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
                  HG + R            ++D   ++  L++A+     +     ++ W +++ 
Sbjct: 476 LESMTNDHGISPRS------EHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLG 529

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSP 381
                      +++   L +  P+  +P
Sbjct: 530 ACSIHGDSEMGKYAADRLFSAAPASPAP 557



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 217/496 (43%), Gaps = 31/496 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--- 68
           SLL+ YS    F ++  +F     +D V+WN MI+  + N        FF +M E     
Sbjct: 82  SLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVC 141

Query: 69  IRFDSTTLLIIVSALTQMNCLKQG------RVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            RFD  TL  ++S     + L+ G      +++H L    G   + ++ N  +  Y KC 
Sbjct: 142 CRFDKATLTTMLSGC---DGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCE 198

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-SLSSAV 181
             +     F  M   + V+W  ++SG   N + E  L  F +M   G  + NV +  S++
Sbjct: 199 CFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSL 258

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  G+ IH L  KLG +    + + ++L+ +YS+CG ++AA + F      D
Sbjct: 259 MACSGLQVLRDGQKIHGLLWKLGMQSD--LCIESALMDLYSKCGSLDAAWQIFESAEELD 316

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VS   I+  FA NG  EEA  +  +M  +  +E D   V  ++ +      L  G+ +H
Sbjct: 317 GVSLTVILVAFAQNGFEEEAIQIFTKMVAL-GMEVDANMVSAVLGVFGVGTYLALGKQIH 375

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I++    +  + N L++ YSK   LS + L+F  +   N  VSWNS+I+        
Sbjct: 376 SLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNS-VSWNSVIAAFARHGDG 434

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNA 408
                 ++EM       +  T L++L +C+    +E G   +       G S  +     
Sbjct: 435 FKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYAC 494

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ M    G L  A   ++ +  +     W  ++ AC+ +G  +        +     AS
Sbjct: 495 VVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPAS 554

Query: 469 PDS-VTLVNVISACGN 483
           P   V + N+ S+ GN
Sbjct: 555 PAPYVLMANIYSSEGN 570


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 292/551 (52%), Gaps = 43/551 (7%)

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLL------REGRSVHGYAIRRLLGYDLLMMNSLMD 321
           + L+ +  P   T ++L      +L+L      R+   +H + I+  L     +  +L++
Sbjct: 5   LPLLPAKTPTAKTSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLE 64

Query: 322 FYSK--SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
             +     S+  A  +F  I    D  ++N MI G            LFKEM     Q  
Sbjct: 65  SAAILLPTSMDYAVSIFRQIDE-PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPD 123

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T   IL  C+  ++L  G+ IH   +K GF ++    N L+HMY NCG++  A  +  
Sbjct: 124 EFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFD 183

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +S   +   WN +    T++G+++E +K F  M +  +   D VTLV+V++ACG L   
Sbjct: 184 EMSER-NVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL-DIRFDEVTLVSVLTACGRLADL 241

Query: 488 FEGKSLHG-LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             G+ ++  +  K L G  T +  +L+ MY +C  + +A  +F+     ++  W+ MIS 
Sbjct: 242 ELGEWINRYVEEKGLKGNPTLI-TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISG 300

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +SQ      AL+LF  ++    +PNEI++VSILS+C  LG L  GK +H  +     +  
Sbjct: 301 YSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT 360

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             + +AL+D Y+ C               K+  +W+ +I     +G+G +A+E F+ M  
Sbjct: 361 VTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLE 420

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
             + P   + I +LSACSH+GLVDEG   + +M  ++ + P  EH+ C+VD+LGR+G ++
Sbjct: 421 KNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIE 480

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EA++FIKN+PIQP   +W  +L++C  H + ++G++  + L  LEP + G YI LSN+Y 
Sbjct: 481 EAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYA 540

Query: 769 ALGRWKDAVEI 779
           ++GRW+DA+++
Sbjct: 541 SVGRWEDALKV 551



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/478 (23%), Positives = 229/478 (47%), Gaps = 18/478 (3%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ 85
           ++++F +    D   +N MI      +     +  F EM E  ++ D  T   I+   ++
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +  L +G  +H L +K G  +   + N  ++MYA CG++  +   F  M   +  +WN++
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
            +G   +   E+ +  F EM     + D V+L S + A   L +L  G+ I+    + G 
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           + +P  ++  SL+ MY++CG ++ A R F  M  +DVV+W+A+I G++   +  EA DL 
Sbjct: 257 KGNP--TLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLF 314

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           HEMQ   +++P+  T+V+++S CA    L  G+ VH +  ++ +   + +  +LMDFY+K
Sbjct: 315 HEMQ-KANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLA 373
             S+  +  +F  + P+ +++SW  +I GL            F  ML    + +  T + 
Sbjct: 374 CGSVESSIEVFGKM-PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIG 432

Query: 374 ILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +L +C+    ++ G+ +     +  G          ++ +    G +  AF  ++ +   
Sbjct: 433 VLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVISACGNLELAFE 489
            +   W  ++ +C  + + +   ++ K +   +   S D + L N+ ++ G  E A +
Sbjct: 493 PNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALK 550



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 161/299 (53%), Gaps = 3/299 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +H     +L+  Y+N    E +  +F E   ++V TWN+M     ++      +  F
Sbjct: 154 GFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLF 213

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+E  IRFD  TL+ +++A  ++  L+ G  ++    + G+  + +L    V+MYAKC
Sbjct: 214 HEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC 273

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++++   F  M   D V+W+ ++SG    +   + L  F EM  +    + +++ S +
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           ++ A LG L  GK +H    K   + +  V++  +L+  Y++CG +E++   F  M  K+
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLT--VTLGTALMDFYAKCGSVESSIEVFGKMPVKN 391

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           V+SW  +I G A NG+ ++A +  + M L ++VEP+  T + ++S C+ + L+ EGR +
Sbjct: 392 VLSWTVLIQGLASNGQGKKALEYFYLM-LEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 158/349 (45%), Gaps = 11/349 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G   +    TSL+  Y+     +++  LF +   +DVV W+AMI+   +       L  
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDL 313

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM +  I  +  T++ I+S+   +  L+ G+ VH    K  M    +L    ++ YAK
Sbjct: 314 FHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAK 373

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG + SS   F  M   + +SW  ++ G   N   +K L YF  M     + ++V+    
Sbjct: 374 CGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGV 433

Query: 181 VAASACLGELSYGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A +  G +  G+ +  ++    G E  P +     ++ +  + G IE A +    M  
Sbjct: 434 LSACSHAGLVDEGRDLFVSMSRDFGIE--PRIEHYGCMVDILGRAGLIEEAFQFIKNMPI 491

Query: 240 K-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD----IATVVTLISLCADSLLL 294
           + + V W  ++    ++   E   + L ++ ++          ++ +   +    D+L +
Sbjct: 492 QPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKV 551

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLM-DFYSKSNSLSKAELLFNAIAPM 342
           R      G  I++  G  L+ ++ ++ +F+++ N  S++E ++NAI  M
Sbjct: 552 RGEMKEKG--IKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDM 598


>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 281/570 (49%), Gaps = 71/570 (12%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D      LI  C+D  LLR+ + +H   +   L  D  + + L+ FYSKSN L +A  +F
Sbjct: 33  DYGAFGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVF 92

Query: 337 NAIAPMNDLVSWNSMISGLFKEMLYLCS------------------QFSFSTLLAILPSC 378
           + I   N + SWN+M+ G     +++ +                   F+ + +L  L S 
Sbjct: 93  DKILDKN-IFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKAL-SV 150

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
             P+S+   K + C+ L+ GF ++   VNAL+  Y  C +   A  L  R+ H+ D   W
Sbjct: 151 LFPDSI-LAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRM-HDRDIVSW 208

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I   +Q G +++  + ++ M       P+ VT+V+V+ AC        G  +H   +
Sbjct: 209 NSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFII 268

Query: 499 KSLMGLDTRVQNALITMYGRC---------------RD----------------IKSAST 527
           +  + +D    N+LI +Y +C               +D                +  A  
Sbjct: 269 ERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMD 328

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           +F    N  L TWN +IS   QN      LEL + ++   F PN +++ SIL   +    
Sbjct: 329 LFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSN 388

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMY---------------SNCKSNAAWSSMISA 629
           L+ GK IH +    G+  N +++++++D Y               S  +S   W+++ISA
Sbjct: 389 LKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISA 448

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           Y  HG    A+ LF +M ++G +P   +  ++L+AC+HSG+V+E  + ++ M  +Y  +P
Sbjct: 449 YSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQP 508

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
             EH+ C+V +L R+G L EA EFI  +PI+P   VWGA+L+  S  GD ++GK V + L
Sbjct: 509 CVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHL 568

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           F +EPEN G Y+ ++N+Y   GRW++A  I
Sbjct: 569 FNMEPENTGNYVIMANLYSQAGRWEEAENI 598



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 139/607 (22%), Positives = 256/607 (42%), Gaps = 97/607 (15%)

Query: 40  TWNAMITACVENRCVVMGLHF--FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           T N  I  C++N C V GL +  FG +++                 +    L+Q + +H 
Sbjct: 14  TPNGGIHHCLQNLCSVNGLDYGAFGRLIQH---------------CSDHRLLRQAKQLHA 58

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNY-- 154
             + + +  D+ L +  +  Y+K   L  +   F  +   +  SWN ++ G  +HN +  
Sbjct: 59  RIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVH 118

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS-YGKVIHALGIKLGYEDSPYVSV 213
               L           + DN +++  + A + L   S   K +    ++ G++   +V  
Sbjct: 119 TLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFV-- 176

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+LI+ YS+C +   A   F  M  +D+VSWN++I G++  G +E+  +L  +M     
Sbjct: 177 VNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTG 236

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           + P+  TVV+++  CA +  L  G  VH + I R +  D+   NSL+  Y+K  SL  A 
Sbjct: 237 LRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYAR 296

Query: 334 LLFNAIAPMND------------------------------LVSWNSMISGLFK------ 357
            LFN ++  ++                              L +WN++ISGL +      
Sbjct: 297 ELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEG 356

Query: 358 --EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
             E++    +F F     TL +ILP+ +   +L+ GK+IH + ++ G+++N     +++ 
Sbjct: 357 ILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIID 416

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            Y   G L  A  +  + S +     W  +I A + +G    A++ F  M       PD 
Sbjct: 417 AYAKLGFLRGAQWVFDQ-SKDRSLIVWTAIISAYSAHGDANAALRLFGDML-SNGTQPDP 474

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT   V++AC +  +  E                 ++ + +   YG           F+ 
Sbjct: 475 VTFTAVLAACAHSGMVNEA---------------WKIFDEMFLKYG-----------FQP 508

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
           C       + CM+   S+      A E    +  EPN     ++L+  +  G +  GK +
Sbjct: 509 CVE----HYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFV 564

Query: 592 HGHVFHL 598
             H+F++
Sbjct: 565 CDHLFNM 571



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 54/418 (12%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC------VENRCVVMGLHFFGE 63
           ++ L+T YS  ++   +  +F +  +K++ +WNAM+         V    ++  L     
Sbjct: 72  ASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYS 131

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           +  +   F  T +L  +S L   + L   + V C  ++ G  +D  + N  +  Y++C +
Sbjct: 132 LTLKPDNFTITCVLKALSVLFPDSIL--AKEVQCFVLRHGFDSDIFVVNALITYYSRCDE 189

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVA 182
              +   F  MH  D VSWN++++G     + E C   +R+M   +G + + V++ S + 
Sbjct: 190 YGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQ 249

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A   +L +G  +H   I+   E    VS  NSLI +Y++CG ++ A   F  M+ KD 
Sbjct: 250 ACAQTNDLVFGMKVHQFIIERKVEMD--VSAHNSLIGLYAKCGSLDYARELFNEMSNKDE 307

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMR------------------------------ 272
           V++ +I+ G+  +G  ++A DL  EM+  R                              
Sbjct: 308 VTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEF 367

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              P+  T+ +++   +    L+ G+++H YAIR    +++ +  S++D Y+K   L  A
Sbjct: 368 GFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGA 427

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
           + +F+  +    L+ W ++IS             LF +ML   +Q    T  A+L +C
Sbjct: 428 QWVFDQ-SKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAAC 484



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 35/328 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +    +L+T YS    +  +  LF    ++D+V+WN+MI    +          +
Sbjct: 169 GFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELY 228

Query: 62  GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M++  G+R +  T++ ++ A  Q N L  G  VH   I+  +  D S  N  + +YAK
Sbjct: 229 RKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAK 288

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG------WS------ 168
           CG L+ +   F+ M   D V++ +I+SG + + + +K +  FREM       W+      
Sbjct: 289 CGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGL 348

Query: 169 -------------------GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
                              G + + V+LSS +   +C   L  GK IHA  I+ GY  + 
Sbjct: 349 VQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNI 408

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           YV+   S+I  Y++ G +  A+  F     + ++ W AII  ++ +G    A  L  +M 
Sbjct: 409 YVAT--SIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDM- 465

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREG 297
           L    +PD  T   +++ CA S ++ E 
Sbjct: 466 LSNGTQPDPVTFTAVLAACAHSGMVNEA 493



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 9/250 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  S+++ Y    + + ++ LF E  N  + TWNA+I+  V+N C    L    EM E G
Sbjct: 309 TYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFG 368

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
            R ++ TL  I+   +  + LK G+ +H  +I+ G   +  +    ++ YAK G L  ++
Sbjct: 369 FRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQ 428

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F        + W  I+S    +      L  F +M  +G Q D V+ ++ +AA A  G
Sbjct: 429 WVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSG 488

Query: 189 ELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVSWN 246
            ++   K+   + +K G++  P V     ++ + S+ G + EAAE       CK  +  N
Sbjct: 489 MVNEAWKIFDEMFLKYGFQ--PCVEHYACMVGVLSRAGMLSEAAE-----FICKMPIEPN 541

Query: 247 AIIDGFALNG 256
           A + G  LNG
Sbjct: 542 AKVWGALLNG 551


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 191/608 (31%), Positives = 285/608 (46%), Gaps = 109/608 (17%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P+ +    L+  C  S   R  R VH   +      ++ + N L+D Y K + L  A  L
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 336 FNAIA------------------------------PMNDLVSWNSMISGL-----FKEML 360
           F+ +                               P  D  SWNSM+SG      F+E L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 361 ----------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
                     +L +++SF + L+   +C     L  G  +H    K  +S +    +AL+
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALS---ACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALI 189

Query: 411 HMYINCGDLVAAFSLLQ-RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            MY  CG +  A  +    I  N  T  WN +I    QNG   EA++ F  M       P
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVT--WNSLITCYEQNGPASEALEVFVRMMDS-GLEP 246

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV-QNALITMYGRCRDIKSASTV 528
           D VTL +V+SAC +L    EG  +H   +K+    D  V  NAL+ MY +C  +  A  V
Sbjct: 247 DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306

Query: 529 FE--SCYNC-----------------------------NLCTWNCMISAFSQNKAEVRAL 557
           F+  S  N                              N+ +WN +I+ ++QN     AL
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS------FISS 608
            LFR L+ E   P   +  ++LSAC  L  L  G+Q H HV   GF+  S      F+ +
Sbjct: 367 RLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGN 426

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L+DMY  C               +   +W+++I  Y  +G G EA+++F +M   G +P
Sbjct: 427 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKP 486

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              ++I +L ACSH+GLV+EG  Y+ +M EE+ + P  +H+ C+VD+LGR+G L EA   
Sbjct: 487 DHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNL 545

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I+ +P+ P   VWG++L+AC  HG+ +MGK  AE L +++P N G Y+ LSNMY  LGRW
Sbjct: 546 IEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRW 605

Query: 774 KDAVEIGK 781
            D V + K
Sbjct: 606 GDVVRVRK 613



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 240/540 (44%), Gaps = 96/540 (17%)

Query: 93  RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           R+VH   +      +  + N  +++Y KC  L+ +   F  M   +T +WN+++S    +
Sbjct: 35  RLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKS 94

Query: 153 NY-------------PEKC------------------LLYFREMGWSGEQADNVSLSSAV 181
            +             P++C                  L YF +M       +  S  SA+
Sbjct: 95  GFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSAL 154

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L +L+ G  +HAL  K  Y    Y+   ++LI MYS+CG +  AE  F GM  ++
Sbjct: 155 SACAGLMDLNMGTQVHALVSKSRYSTDVYMG--SALIDMYSKCGSVACAEEVFSGMIERN 212

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +V+WN++I  +  NG   EA ++   M +   +EPD  T+ +++S CA    L+EG  +H
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRM-MDSGLEPDEVTLASVVSACASLCALKEGLQIH 271

Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN----------------- 343
              ++      DL++ N+L+D Y+K + +++A  +F+ ++  N                 
Sbjct: 272 ARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASV 331

Query: 344 -------------DLVSWNSMISG---------------LFKEMLYLCSQFSFSTLLAIL 375
                        ++VSWN++I+G               L K      + ++F  LL+  
Sbjct: 332 KAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLS-- 389

Query: 376 PSCNSPESLEFGKSIHCWQLKLGF-------SNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            +C +   L  G+  H   LK GF       S+  +G N+L+ MY+ CG +     + ++
Sbjct: 390 -ACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVG-NSLIDMYMKCGSIEDGSRVFEK 447

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +    D   WN +IV   QNG+  EA++ F+ M       PD VT++ V+ AC +  L  
Sbjct: 448 MKER-DCVSWNAIIVGYAQNGYGAEALQIFRKML-VCGEKPDHVTMIGVLCACSHAGLVE 505

Query: 489 EGKS-LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           EG+     +    L+ L       ++ + GR   +  A  + E+   N +   W  +++A
Sbjct: 506 EGRHYFFSMEEHGLIPLKDHY-TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 564



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 223/502 (44%), Gaps = 70/502 (13%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  SL++  +   + + +  LF      D  +WN+M++   ++      L +F +M  E 
Sbjct: 83  TWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHRED 142

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              +  +    +SA   +  L  G  VH L  K+    D  + +  ++MY+KCG +  +E
Sbjct: 143 FLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAE 202

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYP-EKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
             FSGM   + V+WN++++ C   N P  + L  F  M  SG + D V+L+S V+A A L
Sbjct: 203 EVFSGMIERNLVTWNSLIT-CYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASL 261

Query: 188 GELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERA------------- 233
             L  G  IHA  +K   + D   + + N+L+ MY++C  +  A R              
Sbjct: 262 CALKEGLQIHARVVKTNKFRDD--LVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSET 319

Query: 234 ------------------FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
                             F  MT ++VVSWNA+I G+  NG+ EEA  L   ++   S+ 
Sbjct: 320 SMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLK-RESIW 378

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSL 329
           P   T   L+S CA+   L  GR  H + +++   +      D+ + NSL+D Y K  S+
Sbjct: 379 PTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSI 438

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
                +F  +    D VSWN++I G            +F++ML    +    T++ +L +
Sbjct: 439 EDGSRVFEKMKE-RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCA 497

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRIS 430
           C+    +E G+          FS    G+  L   Y    DL+        A +L++ + 
Sbjct: 498 CSHAGLVEEGRHYF-------FSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP 550

Query: 431 HNSDTSCWNIVIVACTQNGHFQ 452
            N D   W  ++ AC  +G+ +
Sbjct: 551 VNPDAVVWGSLLAACKVHGNIE 572



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 199/469 (42%), Gaps = 91/469 (19%)

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           GL ++ LYL +   F+ LL    SC    S    + +H   L   FS      N L+ +Y
Sbjct: 5   GLVRD-LYLPNSSPFAKLL---DSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  L  A  L  R+    +T  WN +I   T++G   EA + F SM +    S +S+ 
Sbjct: 61  GKCDCLDDARKLFDRMPQR-NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMV 119

Query: 474 ------------------------LVN------VISACGNLELAFEGKSLHGLALKSLMG 503
                                   L+N       +SAC  L     G  +H L  KS   
Sbjct: 120 SGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYS 179

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RH 562
            D  + +ALI MY +C  +  A  VF      NL TWN +I+ + QN     ALE+F R 
Sbjct: 180 TDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRM 239

Query: 563 LE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG-FQENSFISSALLDMYSNC-K 618
           ++   EP+E+++ S++SAC  L  L+ G QIH  V     F+++  + +AL+DMY+ C K
Sbjct: 240 MDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSK 299

Query: 619 SNAA---------------------------------------------WSSMISAYGYH 633
            N A                                             W+++I+ Y  +
Sbjct: 300 VNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPE 690
           G+  EA+ LF  +    I PT  +  +LLSAC++   +  G Q + ++L+   E+    E
Sbjct: 360 GENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAE 419

Query: 691 TEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           ++  V   ++DM  + G +++     + +  +     W A++   + +G
Sbjct: 420 SDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNG 467



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 9/266 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  + ++ + TS+++ Y+  +  +++  +F +   ++VV+WNA+I    +N      L  
Sbjct: 309 RMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRL 368

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK------AGMIADSSLCNVF 114
           F  +  E I     T   ++SA   +  L  GR  H   +K      +G  +D  + N  
Sbjct: 369 FRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSL 428

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MY KCG +      F  M   D VSWN I+ G   N Y  + L  FR+M   GE+ D+
Sbjct: 429 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 488

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           V++   + A +  G +  G+  H       +   P       ++ +  + G +  A+   
Sbjct: 489 VTMIGVLCACSHAGLVEEGR--HYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLI 546

Query: 235 WGMTC-KDVVSWNAIIDGFALNGKFE 259
             M    D V W +++    ++G  E
Sbjct: 547 EAMPVNPDAVVWGSLLAACKVHGNIE 572


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/569 (28%), Positives = 291/569 (51%), Gaps = 34/569 (5%)

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WN+        G  + A  L  +M+    + P+ +T   ++  CA    LR  + +H +
Sbjct: 20  TWNSNFRHLVNQGHAQNALILFRQMK-QSGITPNNSTFPFVLKACAKLSHLRNSQIIHAH 78

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKE 358
            ++     ++ +  + +D Y K   L  A  +F  + P+ D+ SWN+M+     SG    
Sbjct: 79  VLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEM-PVRDIASWNAMLLGFAQSGFLDR 137

Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
           +  L      S       T+L ++ S    +SL    +++ + +++G   +    N L+ 
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197

Query: 412 MYINCGDLVAAFSLLQRISHN-SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            Y  CG+L +A +L   I+        WN +I A        +A+  +K M      SPD
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDG-GFSPD 256

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             T++N++S+C   +  F G  +H   +K     D  V N LI MY +C D+ SA  +F 
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRH 587
              +    +W  MISA+++      A+ LF  +E    +P+ +++++++S C Q G L  
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           GK I  +  + G ++N  + +AL+DMY+ C               ++  +W++MI+A   
Sbjct: 377 GKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACAL 436

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G   +A+ELF  M   G++P   + +++L AC+H GLV+ GL+ +N M ++Y + P  +
Sbjct: 437 NGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGID 496

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+VD+LGR G L+EA E IK++P +P  G+W A+LSAC  HG  +MGK V+E LF+L
Sbjct: 497 HYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFEL 556

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEIGK 781
           EP+    Y+ ++N+Y +   W+    I +
Sbjct: 557 EPQVAVPYVEMANIYASAEMWEGVAAIRR 585



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 261/576 (45%), Gaps = 50/576 (8%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
           TWN+     V        L  F +M + GI  +++T   ++ A  +++ L+  +++H   
Sbjct: 20  TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           +K+   ++  +    V+MY KCG L  +   F  M   D  SWN ++ G   + + ++  
Sbjct: 80  LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLS 139

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
              R M  SG + D V++   + +   +  L+    +++ GI++G      VSV N+LI+
Sbjct: 140 CLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMD--VSVANTLIA 197

Query: 220 MYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
            YS+CG++ +AE  F  +    + VVSWN++I  +A   K  +A +    M L     PD
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGM-LDGGFSPD 256

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I+T++ L+S C     L  G  VH + ++     D+ ++N+L+  YSK   +  A  LFN
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316

Query: 338 AIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            ++     VSW  MIS             LF  M     +    T+LA++  C    +LE
Sbjct: 317 GMSD-KTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALE 375

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK I  + +  G  +N +  NAL+ MY  CG    A  L   +++ +  S W  +I AC
Sbjct: 376 LGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVS-WTTMITAC 434

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
             NG  ++A++ F  M  +    P+ +T + V+ AC +           GL  + L   +
Sbjct: 435 ALNGDVKDALELF-FMMLEMGMKPNHITFLAVLQACAH----------GGLVERGLECFN 483

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
              Q      YG                N  +  ++CM+    +      ALE+ + + F
Sbjct: 484 MMTQK-----YG---------------INPGIDHYSCMVDLLGRKGHLREALEIIKSMPF 523

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           EP+     ++LSAC   G +  GK +   +F L  Q
Sbjct: 524 EPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQ 559



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 229/467 (49%), Gaps = 23/467 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F +++   T+ +  Y      E +  +F E   +D+ +WNAM+    ++  +        
Sbjct: 84  FQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLR 143

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   GIR D+ T+L+++ ++ ++  L     V+   I+ G+  D S+ N  +  Y+KCG
Sbjct: 144 HMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCG 203

Query: 123 DLNSSECTFSGMHCA--DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           +L S+E  F  ++      VSWN++++   +     K +  ++ M   G   D  ++ + 
Sbjct: 204 NLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNL 263

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++      L +G ++H+ G+KLG +    V V N+LI MYS+CGD+ +A   F GM+ K
Sbjct: 264 LSSCMQPKALFHGLLVHSHGVKLGCDSD--VCVVNTLICMYSKCGDVHSARFLFNGMSDK 321

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSW  +I  +A  G   EA  L + M+     +PD+ TV+ LIS C  +  L  G+ +
Sbjct: 322 TCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGE-KPDLVTVLALISGCGQTGALELGKWI 380

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
             Y+I   L  ++++ N+L+D Y+K    + A+ LF  +A    +VSW +MI+       
Sbjct: 381 DNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMAN-RTVVSWTTMITACALNGD 439

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTIG 405
                 LF  ML +  + +  T LA+L +C     +E G  + C+ +   K G +     
Sbjct: 440 VKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERG--LECFNMMTQKYGINPGIDH 497

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            + ++ +    G L  A  +++ +    D+  W+ ++ AC  +G  +
Sbjct: 498 YSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKME 544


>gi|357124385|ref|XP_003563881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 670

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 192/629 (30%), Positives = 312/629 (49%), Gaps = 58/629 (9%)

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +   +H   +KLG+  S Y+   N+L+  Y +      A   F  M  ++VVS + +I  
Sbjct: 15  HPSTVHGAAVKLGFLASTYL--CNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVLISN 72

Query: 252 FALNGKFEEAFDLLHEMQLMRSV----EPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
            +  G   EAF L  +M L         P+   +  L+S CA +  +  G  VH  A++ 
Sbjct: 73  VSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASAVKF 132

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE--------- 358
            +  D  +  +L+D YSK   +  +  +F A++P   +VSW SMI+ L            
Sbjct: 133 GVAGDESVAGALVDMYSKCGCVDSSWRVF-ALSPQRSVVSWTSMIACLVNNDGSSGHRDA 191

Query: 359 ----------MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                     +    +  +FS +L +    ++P  L  GK IH   LK+G   +     A
Sbjct: 192 ALSLLRKMLLLKIWPTNATFSCILKVF---DAPGLLPGGKQIHGCLLKMGTEVDPALGTA 248

Query: 409 LMHMYINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           L+ MY  CG +     L  RI H+  S TS    + VA  +NG+  EA+  F+ M  ++ 
Sbjct: 249 LIAMYGRCGGVDEIAKLSCRIRHDAFSRTS----LFVAYARNGYSMEAVWNFREMVMEKM 304

Query: 467 ASPDSV--TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           A   S   +L+ V S+ G L LA E   +H  ALK+L  LDT + NA IT+YGRC DI +
Sbjct: 305 AIDQSTITSLLQVCSSLGQLRLAEE---VHCYALKTLFKLDTSLLNATITVYGRCGDIAT 361

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
           A  +F+   N ++ +W  +++ ++QN      L  F+ +           I S+L AC+ 
Sbjct: 362 AEIIFDLLENKDIISWTALLTCYAQNDLPQETLLFFKEMLRKGLGSPIFCITSVLRACSS 421

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSM 626
                 G+QIH     LG  +   + +AL+ MY+ C S                 +W+++
Sbjct: 422 TTNHAVGRQIHSRAVKLGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGIISWNAL 481

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+++  HG    AI+LF  M   GI P   + + LLS+CS  GL+ EG +Y+  M   Y+
Sbjct: 482 ITSFSQHGNEVAAIQLFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFKQMKALYN 541

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           V P+ EH+ C+VD+  R+G+  +A EFI  LP QP   VW A+L++C  HG+ ++G+  A
Sbjct: 542 VEPKMEHYTCMVDLFARAGRFSDALEFIDALPCQPDQLVWEALLASCRTHGNVELGRLAA 601

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKD 775
           + + ++ PE+   YI+LSN++ ++  W++
Sbjct: 602 KKILEIRPEDPSPYITLSNIHASVHMWEE 630



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 156/628 (24%), Positives = 282/628 (44%), Gaps = 66/628 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA      +LL +Y   S    +  LF E  +++VV+ + +I+       +      F
Sbjct: 27  GFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVLISNVSRLGALCEAFLLF 86

Query: 62  GEMVEEG-----IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +M+  G      R +S  L  +VS   + + +  G  VH  ++K G+  D S+    V+
Sbjct: 87  SDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASAVKFGVAGDESVAGALVD 146

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-----YPEKCLLYFREMGWSGEQ 171
           MY+KCG ++SS   F+       VSW T M  CL NN     + +  L   R+M      
Sbjct: 147 MYSKCGCVDSSWRVFALSPQRSVVSW-TSMIACLVNNDGSSGHRDAALSLLRKMLLLKIW 205

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
             N + S  +      G L  GK IH   +K+G E  P  ++  +LI+MY +CG ++   
Sbjct: 206 PTNATFSCILKVFDAPGLLPGGKQIHGCLLKMGTEVDP--ALGTALIAMYGRCGGVDEIA 263

Query: 232 RAFWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           +    ++C+   D  S  ++   +A NG   EA     EM +M  +  D +T+ +L+ +C
Sbjct: 264 K----LSCRIRHDAFSRTSLFVAYARNGYSMEAVWNFREM-VMEKMAIDQSTITSLLQVC 318

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +    LR    VH YA++ L   D  ++N+ +  Y +   ++ AE++F+ +    D++SW
Sbjct: 319 SSLGQLRLAEEVHCYALKTLFKLDTSLLNATITVYGRCGDIATAEIIFDLLEN-KDIISW 377

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
            ++++              FKEML          + ++L +C+S  +   G+ IH   +K
Sbjct: 378 TALLTCYAQNDLPQETLLFFKEMLRKGLGSPIFCITSVLRACSSTTNHAVGRQIHSRAVK 437

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           LG  +     NAL+ MY  CG +  A  +   +      S WN +I + +Q+G+   AI+
Sbjct: 438 LGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGIIS-WNALITSFSQHGNEVAAIQ 496

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M Q++   PD  T V ++S+C  + L  EG       +K+L  ++ ++++      
Sbjct: 497 LFDLM-QEEGICPDDYTFVGLLSSCSRMGLIAEGCEYFK-QMKALYNVEPKMEH------ 548

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSIL 576
                                  + CM+  F++      ALE    L  +P+++   ++L
Sbjct: 549 -----------------------YTCMVDLFARAGRFSDALEFIDALPCQPDQLVWEALL 585

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENS 604
           ++C   G +  G+     +  +  ++ S
Sbjct: 586 ASCRTHGNVELGRLAAKKILEIRPEDPS 613



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 289/633 (45%), Gaps = 63/633 (9%)

Query: 89  LKQGR---VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           L+ GR    VH  ++K G +A + LCN  +  Y +      +   F  M   + VS + +
Sbjct: 10  LRGGRHPSTVHGAAVKLGFLASTYLCNNLLLSYFRSSLPAEARGLFDEMPHRNVVSCSVL 69

Query: 146 MSGCLHNNYPEKCLLYFREMGWSG-----EQADNVSLSSAVAASACLGELSYGKVIHALG 200
           +S         +  L F +M  SG     ++ ++ +L + V+  A   ++  G  +HA  
Sbjct: 70  ISNVSRLGALCEAFLLFSDMLLSGGRGSYDRPNSFALGALVSGCARASDIVAGSQVHASA 129

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN---GK 257
           +K G       SV  +L+ MYS+CG ++++ R F     + VVSW ++I     N     
Sbjct: 130 VKFGVAGDE--SVAGALVDMYSKCGCVDSSWRVFALSPQRSVVSWTSMIACLVNNDGSSG 187

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
             +A   L    L+  + P  AT   ++ +     LL  G+ +HG  ++     D  +  
Sbjct: 188 HRDAALSLLRKMLLLKIWPTNATFSCILKVFDAPGLLPGGKQIHGCLLKMGTEVDPALGT 247

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
           +L+  Y +   + +   L   I   +D  S  S+                F+EM+     
Sbjct: 248 ALIAMYGRCGGVDEIAKLSCRI--RHDAFSRTSLFVAYARNGYSMEAVWNFREMVMEKMA 305

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA--- 422
              ST+ ++L  C+S   L   + +HC+ LK  F  +T  +NA + +Y  CGD+  A   
Sbjct: 306 IDQSTITSLLQVCSSLGQLRLAEEVHCYALKTLFKLDTSLLNATITVYGRCGDIATAEII 365

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           F LL+    N D   W  ++    QN   QE +  FK M ++   SP    + +V+ AC 
Sbjct: 366 FDLLE----NKDIISWTALLTCYAQNDLPQETLLFFKEMLRKGLGSP-IFCITSVLRACS 420

Query: 483 NLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           +      G+ +H  A+K  +G+D    V+NAL+TMY +C  +  A  +F S  +  + +W
Sbjct: 421 STTNHAVGRQIHSRAVK--LGIDDADSVENALVTMYAKCGSVHIALKIFNSMRSRGIISW 478

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I++FSQ+  EV A++LF  ++ E   P++ + V +LS+C+++G++  G +       
Sbjct: 479 NALITSFSQHGNEVAAIQLFDLMQEEGICPDDYTFVGLLSSCSRMGLIAEGCEY------ 532

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
             F++       +  +Y+       ++ M+  +   G+  +A+E    +     +P +  
Sbjct: 533 --FKQ-------MKALYNVEPKMEHYTCMVDLFARAGRFSDALEFIDAL---PCQPDQLV 580

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +LL++C   G V+ G      +LE   +RPE
Sbjct: 581 WEALLASCRTHGNVELGRLAAKKILE---IRPE 610



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 176/364 (48%), Gaps = 8/364 (2%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           D  +  ++  A   N   +  +  F EMV E +  D +T+  ++   + +  L+    VH
Sbjct: 272 DAFSRTSLFVAYARNGYSMEAVWNFREMVMEKMAIDQSTITSLLQVCSSLGQLRLAEEVH 331

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
           C ++K     D+SL N  + +Y +CGD+ ++E  F  +   D +SW  +++    N+ P+
Sbjct: 332 CYALKTLFKLDTSLLNATITVYGRCGDIATAEIIFDLLENKDIISWTALLTCYAQNDLPQ 391

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           + LL+F+EM   G  +    ++S + A +     + G+ IH+  +KLG +D+   SV N+
Sbjct: 392 ETLLFFKEMLRKGLGSPIFCITSVLRACSSTTNHAVGRQIHSRAVKLGIDDAD--SVENA 449

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L++MY++CG +  A + F  M  + ++SWNA+I  F+ +G    A  L   MQ    + P
Sbjct: 450 LVTMYAKCGSVHIALKIFNSMRSRGIISWNALITSFSQHGNEVAAIQLFDLMQ-EEGICP 508

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM--MNSLMDFYSKSNSLSKAEL 334
           D  T V L+S C+   L+ EG   +   ++ L   +  M     ++D ++++   S A  
Sbjct: 509 DDYTFVGLLSSCSRMGLIAEG-CEYFKQMKALYNVEPKMEHYTCMVDLFARAGRFSDALE 567

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESL--EFGKSIHC 392
             +A+    D + W ++++           + +   +L I P   SP         S+H 
Sbjct: 568 FIDALPCQPDQLVWEALLASCRTHGNVELGRLAAKKILEIRPEDPSPYITLSNIHASVHM 627

Query: 393 WQLK 396
           W+ K
Sbjct: 628 WEEK 631


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/431 (35%), Positives = 247/431 (57%), Gaps = 21/431 (4%)

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +S + +++ + +S  S+ +  +IH   +K L +S+  IG + L+ MY   G    A  L 
Sbjct: 62  YSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIG-DRLVSMYFKLGYDEDAQRLF 120

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
             +  N D   WN ++   +  G+    +  F  M  +    P+ VTL++V+SAC ++  
Sbjct: 121 DEMP-NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA 179

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
             EGKSLHG+ +K  M    +V N+LI MYG+   + +AS +FE     +L +WN M+  
Sbjct: 180 LDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVI 239

Query: 547 FSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            + N    + ++LF  ++     P++ ++V++L ACT  G+ R  + IH ++   GF  +
Sbjct: 240 HNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD 299

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             I++ALL++Y+                 +   AW++M++ Y  H  G EAI+LF  M  
Sbjct: 300 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 359

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G+     +   LLSACSHSGLV+EG +Y+  M E Y V P  +H+ C+VD+LGRSG+L+
Sbjct: 360 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 419

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           +AYE IK++P++P  GVWGA+L AC  +G+ ++GK+VAE L  L+P +   YI LSN+Y 
Sbjct: 420 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 479

Query: 769 ALGRWKDAVEI 779
           A G W+DA ++
Sbjct: 480 AAGLWRDASKV 490



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 194/411 (47%), Gaps = 32/411 (7%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
             RV+  L+   G I D       V+MY K G    ++  F  M   D VSWN++MSG  
Sbjct: 85  HARVIKSLNYSDGFIGDR-----LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLS 139

Query: 151 HNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
              Y   CL  F R    SG Q + V+L S V+A A +G L  GK +H + +KLG   S 
Sbjct: 140 GRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGM--SG 197

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              V NSLI+MY + G ++AA + F  M  + +VSWN+++     NG  E+  DL + M+
Sbjct: 198 KAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 257

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               + PD AT+V L+  C D+ L R+  S+H Y  R     D+++  +L++ Y+K   L
Sbjct: 258 RA-GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 316

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
           + +E +F  I    D ++W +M++G            LF  M+    +    T   +L +
Sbjct: 317 NASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 375

Query: 378 CNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           C+    +E GK         ++++    + +  V+ L       G L  A+ L++ +   
Sbjct: 376 CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG----RSGRLEDAYELIKSMPME 431

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQNASPDSVTLVNVISACG 482
             +  W  ++ AC   G+ +   +  +  ++   +   + + L N+ SA G
Sbjct: 432 PSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 482



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 195/434 (44%), Gaps = 50/434 (11%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEA 229
           Q  ++  S   A S+C   +SY   IHA  IK L Y D     + + L+SMY + G  E 
Sbjct: 60  QVYSIVQSLVFAISSCTS-VSYCSAIHARVIKSLNYSDG---FIGDRLVSMYFKLGYDED 115

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A+R F  M  KD+VSWN+++ G +  G      +    M+     +P+  T+++++S CA
Sbjct: 116 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 175

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           D   L EG+S+HG  ++  +     ++NSL++ Y K   L  A  LF  + P+  LVSWN
Sbjct: 176 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM-PVRSLVSWN 234

Query: 350 SMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           SM+              LF  M         +T++A+L +C         +SIH +  + 
Sbjct: 235 SMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC 294

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF+ + I   AL+++Y   G L A+  + + I  + D   W  ++     +   +EAIK 
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHACGREAIKL 353

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  M  ++    D VT  +++SAC +  L  EGK         +M    RV+        
Sbjct: 354 FDLMV-KEGVEVDHVTFTHLLSACSHSGLVEEGKKYF-----EIMSEVYRVEP------- 400

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                              L  ++CM+    ++     A EL + +  EP+     ++L 
Sbjct: 401 ------------------RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 442

Query: 578 ACTQLGVLRHGKQI 591
           AC   G +  GK++
Sbjct: 443 ACRVYGNVELGKEV 456



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 4/288 (1%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L++ Y  + Y E +  LF E  NKD+V+WN++++       +   L+ F  M  E G + 
Sbjct: 103 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 162

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TLL +VSA   M  L +G+ +H + +K GM   + + N  +NMY K G L+++   F
Sbjct: 163 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 222

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M     VSWN+++    HN Y EK +  F  M  +G   D  ++ + + A    G   
Sbjct: 223 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 282

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IHA   + G+     + +  +L+++Y++ G + A+E  F  +  +D ++W A++ G
Sbjct: 283 QAESIHAYIHRCGFNAD--IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 340

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +A++    EA  L  ++ +   VE D  T   L+S C+ S L+ EG+ 
Sbjct: 341 YAVHACGREAIKLF-DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 387



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 6/300 (2%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y  + + +++  LF E   + +V+WN+M+     N     G+  F  M   GI  
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T++ ++ A T     +Q   +H    + G  AD  +    +N+YAK G LN+SE  F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D ++W  +++G   +    + +  F  M   G + D+V+ +  ++A +  G + 
Sbjct: 324 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 383

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIID 250
            GK    +  ++ Y   P +   + ++ +  + G +E A      M  +     W A++ 
Sbjct: 384 EGKKYFEIMSEV-YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 442

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
              + G  E   ++  ++    S++P D    + L ++ + + L R+   V      R L
Sbjct: 443 ACRVYGNVELGKEVAEQLL---SLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A +  +T+LL  Y+ +    +S  +F E  ++D + W AM+     + C    +  F
Sbjct: 295 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 354

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
             MV+EG+  D  T   ++SA +    +++G+
Sbjct: 355 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 386


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/412 (36%), Positives = 231/412 (56%), Gaps = 22/412 (5%)

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK IHC  LKLGF  +     +L+HMY   G +  A  L   +    D   WN +I    
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMP-ARDRGSWNAMISGYC 71

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           QNG+  EA+     M + +    D++T+ +V+  C  +     GK +H   +K  +  + 
Sbjct: 72  QNGNAAEALDIADEM-RLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF----RH 562
            V NALI MY +   +  A  VF      ++ +WN +I+ ++QN     A+E++     H
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189

Query: 563 LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
            E  PN+ + VSIL A + +G L+ G +IHG V       + F+ + L+DMY  C     
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDD 249

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                     K++  W++MIS YG HG G +A+ELF EM    ++P   + +SLLSACSH
Sbjct: 250 AISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSH 309

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           SGLV +    +N M EEY ++P  +H+ C+VD+ GR+G+L+ A+ FIK +PIQP    WG
Sbjct: 310 SGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWG 369

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           A+L+AC  HG+ ++GK  +E LF+++ ENVGYY+ LSN+Y  +G+W+   ++
Sbjct: 370 ALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDV 421



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 21/379 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  G+ +HCL +K G   D  +    V+MY++ G +  +   F  M   D  SWN ++SG
Sbjct: 10  LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISG 69

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    + L    EM   G + D ++++S +   A +G++  GK+IH   IK G E  
Sbjct: 70  YCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFE 129

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +VS  N+LI+MY++ G +  A++ F G+  KDVVSWN +I G+A NG   EA ++   M
Sbjct: 130 LFVS--NALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLM 186

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +    + P+  T V+++   +    L++G  +HG  I+  L  D+ +   L+D Y K   
Sbjct: 187 EEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGK 246

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
           L  A  LF  + P  + V WN+MIS             LF+EM     +    T +++L 
Sbjct: 247 LDDAISLFYQV-PRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLS 305

Query: 377 SCNSPESLEFGKSIHCWQL---KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +C+   S     +  C+ +   + G   +      ++ ++   G+L  AF+ ++++    
Sbjct: 306 ACS--HSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP 363

Query: 434 DTSCWNIVIVACTQNGHFQ 452
           D S W  ++ AC  +G+ +
Sbjct: 364 DASAWGALLNACRIHGNIE 382



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 255/578 (44%), Gaps = 104/578 (17%)

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            AC G+L  GK IH L +KLG+E   +V+   SL+ MYS+ G +  A + F  M  +D  
Sbjct: 5   KAC-GDLLDGKKIHCLVLKLGFEWDVFVAA--SLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWNA+I G+  NG   EA D+  EM+L   V+ D  TV +++ +CA    +  G+ +H Y
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRL-EGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML--- 360
            I+  L ++L + N+L++ Y+K  SL  A+ +F  +  + D+VSWN++I+G  +  L   
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL--IKDVVSWNTLITGYAQNGLASE 178

Query: 361 ----YLCSQ------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               YL  +       +  T ++ILP+ +   +L+ G  IH   +K    ++      L+
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY  CG L  A SL  ++   +    WN +I     +G  ++A++ F+ M + +   PD
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVP-WNAMISCYGVHGDGEKALELFREM-KAERVKPD 296

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ---NALITMYGRCRDIKSAST 527
            +T V+++SAC                  S  GL +  Q   N +   YG    IK +  
Sbjct: 297 HITFVSLLSAC------------------SHSGLVSDAQWCFNMMEEEYG----IKPS-- 332

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                    L  + CM+  F +      A    + +  +P+  +  ++L+AC   G +  
Sbjct: 333 ---------LKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIEL 383

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC------------------KSNAAWSSMISA 629
           GK     +F +   EN      L ++Y+N                   + N  WSS+I  
Sbjct: 384 GKHASERLFEVD-SENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILN 442

Query: 630 YGYHGKGWEAIELF------HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
                     +++F      H  C    R  +     L S     G V +    +  +L+
Sbjct: 443 --------NKVDVFYTGNQTHPKCEEIYRELR----DLTSKIKTIGYVPD----FCFVLQ 486

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
             DV  + + H+    ++G S +L  AY  I   P  P
Sbjct: 487 --DVEEDEKEHI----LMGHSERLAIAYGIISTSPKTP 518



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 175/362 (48%), Gaps = 22/362 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + SL+  YS       +  LF +   +D  +WNAMI+   +N      L   
Sbjct: 24  GFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIA 83

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EG++ D+ T+  ++    Q+  +  G+++H   IK G+  +  + N  +NMYAK 
Sbjct: 84  DEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKF 143

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-SLSSA 180
           G L  ++  F G+   D VSWNT+++G   N    + +  +  M    E   N  +  S 
Sbjct: 144 GSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSI 202

Query: 181 VAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + A + +G L  G  IH   IK   Y D   V V   LI MY +CG ++ A   F+ +  
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSD---VFVGTCLIDMYGKCGKLDDAISLFYQVPR 259

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR- 298
           K+ V WNA+I  + ++G  E+A +L  EM+  R V+PD  T V+L+S C+ S L+ + + 
Sbjct: 260 KNSVPWNAMISCYGVHGDGEKALELFREMKAER-VKPDHITFVSLLSACSHSGLVSDAQW 318

Query: 299 ----SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM---NDLVSWNSM 351
                   Y I+  L +       ++D + ++  L   E+ FN I  M    D  +W ++
Sbjct: 319 CFNMMEEEYGIKPSLKH----YGCMVDLFGRAGEL---EMAFNFIKKMPIQPDASAWGAL 371

Query: 352 IS 353
           ++
Sbjct: 372 LN 373



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 32/302 (10%)

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+ ACG+L    +GK +H L LK     D  V  +L+ MY R   +  A  +F+     +
Sbjct: 3   VVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
             +WN MIS + QN     AL++   +  E    + I++ S+L  C Q+G +  GK IH 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 594 HVFHLGFQENSFISSALLDMYSN--------------CKSNAAWSSMISAYGYHGKGWEA 639
           +V   G +   F+S+AL++MY+                K   +W+++I+ Y  +G   EA
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEA 179

Query: 640 IELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE---YDVRPETEHHV 695
           IE++  M  +  I P + + +S+L A SH G + +G++ +  +++     DV   T    
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGT---- 235

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++DM G+ GKL +A      +P +     W AM+S    HGD   G++  EL  +++ E
Sbjct: 236 CLIDMYGKCGKLDDAISLFYQVP-RKNSVPWNAMISCYGVHGD---GEKALELFREMKAE 291

Query: 756 NV 757
            V
Sbjct: 292 RV 293


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 253/446 (56%), Gaps = 27/446 (6%)

Query: 355 LFKEMLYLCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMH 411
           +F+E     SQF   +S + +++ + +S  S+ +  +IH   +K L +S+  IG + L+ 
Sbjct: 108 IFRE----ASQFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIG-DRLVS 162

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY   G    A  L   +  N D   WN ++   +  G+    +  F  M  +    P+ 
Sbjct: 163 MYFKLGYDEDAQRLFDEMP-NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNE 221

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VTL++V+SAC ++    EGKSLHG+ +K  M    +V N+LI MYG+   + +AS +FE 
Sbjct: 222 VTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEE 281

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
               +L +WN M+   + N    + ++LF   +     P++ ++V++L ACT  G+ R  
Sbjct: 282 MPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQA 341

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           + IH ++   GF  +  I++ALL++Y+                 +   AW++M++ Y  H
Sbjct: 342 ESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVH 401

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
             G EAI+LF  M   G+     +   LLSACSHSGLV+EG +Y+  M E Y V P  +H
Sbjct: 402 ACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH 461

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C+VD+LGRSG+L++AYE IK++P++P  GVWGA+L AC  +G+ ++GK+VAE L  L+
Sbjct: 462 YSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLD 521

Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
           P +   YI LSN+Y A G W+DA ++
Sbjct: 522 PSDHRNYIMLSNIYSAAGLWRDASKV 547



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 194/411 (47%), Gaps = 32/411 (7%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
             RV+  L+   G I D       V+MY K G    ++  F  M   D VSWN++MSG  
Sbjct: 142 HARVIKSLNYSDGFIGDR-----LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLS 196

Query: 151 HNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
              Y   CL  F R    SG Q + V+L S V+A A +G L  GK +H + +KLG   S 
Sbjct: 197 GRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGM--SG 254

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
              V NSLI+MY + G ++AA + F  M  + +VSWN+++     NG  E+  DL + M+
Sbjct: 255 KAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 314

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               + PD AT+V L+  C D+ L R+  S+H Y  R     D+++  +L++ Y+K   L
Sbjct: 315 RA-GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 373

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
           + +E +F  I    D ++W +M++G            LF  M+    +    T   +L +
Sbjct: 374 NASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSA 432

Query: 378 CNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           C+    +E GK         ++++    + +  V+ L       G L  A+ L++ +   
Sbjct: 433 CSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG----RSGRLEDAYELIKSMPME 488

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKS-MTQQQNASPDSVTLVNVISACG 482
             +  W  ++ AC   G+ +   +  +  ++   +   + + L N+ SA G
Sbjct: 489 PSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 539



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 191/423 (45%), Gaps = 50/423 (11%)

Query: 182 AASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           A S+C   +SY   IHA  IK L Y D     + + L+SMY + G  E A+R F  M  K
Sbjct: 128 AISSCT-SVSYCSAIHARVIKSLNYSDG---FIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+VSWN+++ G +  G      +    M+     +P+  T+++++S CAD   L EG+S+
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 243

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
           HG  ++  +     ++NSL++ Y K   L  A  LF  + P+  LVSWNSM+        
Sbjct: 244 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM-PVRSLVSWNSMVVIHNHNGY 302

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                 LF  M         +T++A+L +C         +SIH +  + GF+ + I   A
Sbjct: 303 AEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATA 362

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+++Y   G L A+  + + I  + D   W  ++     +   +EAIK F  M  ++   
Sbjct: 363 LLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHACGREAIKLFDLMV-KEGVE 420

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D VT  +++SAC +  L  EGK         +M    RV+                   
Sbjct: 421 VDHVTFTHLLSACSHSGLVEEGKKYF-----EIMSEVYRVEP------------------ 457

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
                   L  ++CM+    ++     A EL + +  EP+     ++L AC   G +  G
Sbjct: 458 -------RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELG 510

Query: 589 KQI 591
           K++
Sbjct: 511 KEV 513



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 4/288 (1%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L++ Y  + Y E +  LF E  NKD+V+WN++++       +   L+ F  M  E G + 
Sbjct: 160 LVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 219

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TLL +VSA   M  L +G+ +H + +K GM   + + N  +NMY K G L+++   F
Sbjct: 220 NEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 279

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M     VSWN+++    HN Y EK +  F  M  +G   D  ++ + + A    G   
Sbjct: 280 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 339

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IHA   + G+     + +  +L+++Y++ G + A+E  F  +  +D ++W A++ G
Sbjct: 340 QAESIHAYIHRCGFNAD--IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAG 397

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +A++    EA  L  ++ +   VE D  T   L+S C+ S L+ EG+ 
Sbjct: 398 YAVHACGREAIKLF-DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 444



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 6/300 (2%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y  + + +++  LF E   + +V+WN+M+     N     G+  F  M   GI  
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T++ ++ A T     +Q   +H    + G  AD  +    +N+YAK G LN+SE  F
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D ++W  +++G   +    + +  F  M   G + D+V+ +  ++A +  G + 
Sbjct: 381 EEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 440

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIID 250
            GK    +  ++ Y   P +   + ++ +  + G +E A      M  +     W A++ 
Sbjct: 441 EGKKYFEIMSEV-YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 499

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
              + G  E   ++  ++    S++P D    + L ++ + + L R+   V      R L
Sbjct: 500 ACRVYGNVELGKEVAEQLL---SLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 556



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A +  +T+LL  Y+ +    +S  +F E  ++D + W AM+     + C    +  F
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
             MV+EG+  D  T   ++SA +    +++G+
Sbjct: 412 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 443


>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 762

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 176/598 (29%), Positives = 311/598 (52%), Gaps = 23/598 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            +++ AY  +   + +L LF++  N +VV WN MI+   +       +  F  M + GI+
Sbjct: 123 VTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIK 182

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
              +TL  ++SA+  +  L  G +VH  +IK G+ ++  + +  +NMYAKC +L +++  
Sbjct: 183 STRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKV 242

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + V WN ++ G   N Y  + +     M   G   D  + +S ++A ACL  +
Sbjct: 243 FDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHV 302

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ +H++ IK  +  + +V   N+LI MY++ G +E A + F  M  +D VSWNAII 
Sbjct: 303 EGGRQLHSIIIKNKFASNLFVG--NALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIV 360

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+       EAF +  +M L+  + PD  ++ +++S CA+     +G+ +H  +++  L 
Sbjct: 361 GYVQEEDEVEAFLMFQKMHLV-GILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLE 419

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----------LFKEM 359
             L   +SL+D Y+K   +  A+ +  ++ P + +VS N++I+G           LF++M
Sbjct: 420 TSLYAGSSLIDMYAKCGDVGSAQKILKSM-PEHSVVSINALIAGYAPVNLEEAIILFEKM 478

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCG 417
                  S  T  ++L  C  PE L  G  IHC  LK G  + ++ +GV +L+ MY+   
Sbjct: 479 QAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGV-SLLGMYVKSL 537

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               A  L    S+   T  W  +I    QN    EA++ ++ M +  NA PD  T V+V
Sbjct: 538 RKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEM-RSCNALPDQATFVSV 596

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN- 536
           + AC  L    +G+ +H L  ++ + LD    +ALI MY +C D++S+  VFE  ++ N 
Sbjct: 597 LRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKND 656

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
           + +WN MI  F++N     AL +F  ++     P++++ + +L+AC+  G +  G+QI
Sbjct: 657 VISWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI 714



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 191/686 (27%), Positives = 332/686 (48%), Gaps = 51/686 (7%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+  D+ +   +++   +    ++   V     K G   D       +N Y   G L+ +
Sbjct: 79  GVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALGRLDDA 138

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   + V+WN ++SG     +  K +  F  M  +G ++   +L S ++A A L
Sbjct: 139 LGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASL 198

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +L +G ++HA  IK G + + YV   +SLI+MY++C ++EAA++ F  +  ++VV WNA
Sbjct: 199 TDLDFGLLVHAEAIKQGLDSNVYVG--SSLINMYAKCKELEAAKKVFDPIDERNVVLWNA 256

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           ++ G+A NG   E  +LL  M+      PD  T  +++S CA    +  GR +H   I+ 
Sbjct: 257 MVGGYAQNGYAHEVIELLSNMKSC-GFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKN 315

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               +L + N+L+D Y+KS  L  A   F  +    D VSWN++I G            +
Sbjct: 316 KFASNLFVGNALIDMYAKSGFLEDARKQFELMKS-RDNVSWNAIIVGYVQEEDEVEAFLM 374

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F++M  +       +L +IL +C + E  E GK IHC  +K G   +    ++L+ MY  
Sbjct: 375 FQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAK 434

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGD+ +A  +L+ +  +S  S     ++A     + +EAI  F+ M Q +  +P  +T  
Sbjct: 435 CGDVGSAQKILKSMPEHSVVSI--NALIAGYAPVNLEEAIILFEKM-QAEGLNPSEITFA 491

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-ALITMYGRCRDIKSASTVFESCYN 534
           +++  CG  E    G  +H L LK  +  D      +L+ MY +      A  +F    N
Sbjct: 492 SLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSN 551

Query: 535 C-NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
             +   W  MIS  +QN     AL+ ++ +      P++ + VS+L AC  L  +  G++
Sbjct: 552 PKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGRE 611

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA-AWSSMISAYGYHG 634
           IH  +F  G   +    SAL+DMY+ C               K++  +W+SMI  +  +G
Sbjct: 612 IHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNG 671

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEH 693
               A+ +F+EM  + + P   + + +L+ACSH+G V EG Q        +D++P     
Sbjct: 672 YAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI-------FDMKPSFVTA 724

Query: 694 HVCIV--DMLGRS-GKLQEAYEFIKN 716
             C+V  ++L ++  K+ E + +I+N
Sbjct: 725 PACLVREEVLTKAYAKMVEIFRWIEN 750



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 201/801 (25%), Positives = 355/801 (44%), Gaps = 134/801 (16%)

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           M L  +G +   G+  +  T  I++S   +++ ++ GR+VHC  +K G    S      +
Sbjct: 1   MVLKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALI 60

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           +MYAK   ++     F G    DTVSW ++++G +    PE+ L  F +M   G + D V
Sbjct: 61  DMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQV 120

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +  + + A   LG L       ALG+                                F+
Sbjct: 121 AFVTVINAYVALGRLD-----DALGL--------------------------------FF 143

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTLISLCADSLL 293
            M   +VV+WN +I G A  G   ++ +L   M+   ++S    + +V++ I+   D   
Sbjct: 144 QMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTD--- 200

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G  VH  AI++ L  ++ + +SL++ Y+K   L  A+ +F+ I   N +V WN+M+ 
Sbjct: 201 LDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERN-VVLWNAMVG 259

Query: 354 GLFK-----EMLYLCS----------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           G  +     E++ L S          +F++++   IL +C   E +E G+ +H   +K  
Sbjct: 260 GYAQNGYAHEVIELLSNMKSCGFHPDEFTYTS---ILSACACLEHVEGGRQLHSIIIKNK 316

Query: 399 FSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           F++N    NAL+ MY   G   D    F L++    + D   WN +IV   Q     EA 
Sbjct: 317 FASNLFVGNALIDMYAKSGFLEDARKQFELMK----SRDNVSWNAIIVGYVQEEDEVEAF 372

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
             F+ M       PD V+L +++SAC N+E   +GK +H L++KS +       ++LI M
Sbjct: 373 LMFQKM-HLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDM 431

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C D+ SA  + +S    ++ + N +I+ ++    E  A+ LF  ++ E   P+EI+ 
Sbjct: 432 YAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPVNLE-EAIILFEKMQAEGLNPSEITF 490

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQ-ENSFISSALLDMY----------------S 615
            S+L  C     L  G QIH  +   G Q ++ F+  +LL MY                S
Sbjct: 491 ASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFS 550

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
           N KS   W++MIS    +    EA++ + EM +    P +++ +S+L AC+    + +G 
Sbjct: 551 NPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGR 610

Query: 676 QYYNNMLEEYDVRPETEHHVC--IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM---- 729
           + ++ +   +    + +   C  ++DM  + G ++ + +  +++  +     W +M    
Sbjct: 611 EIHSLI---FRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGF 667

Query: 730 -------------------------------LSACSHHGDTKMGKQVAELLFKLEPENVG 758
                                          L+ACSH G    G+Q+    F ++P  V 
Sbjct: 668 AKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI----FDMKPSFVT 723

Query: 759 YYISLSNMYVALGRWKDAVEI 779
               L    V    +   VEI
Sbjct: 724 APACLVREEVLTKAYAKMVEI 744



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 244/506 (48%), Gaps = 18/506 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  +++   +SL+  Y+     E++  +F     ++VV WNAM+    +N      +  
Sbjct: 214 QGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIEL 273

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M   G   D  T   I+SA   +  ++ GR +H + IK    ++  + N  ++MYAK
Sbjct: 274 LSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAK 333

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +   F  M   D VSWN I+ G +      +  L F++M   G   D VSL+S 
Sbjct: 334 SGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASI 393

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A +     GK IH L +K G E S Y    +SLI MY++CGD+ +A++    M   
Sbjct: 394 LSACANVEGFEQGKPIHCLSVKSGLETSLYAG--SSLIDMYAKCGDVGSAQKILKSMPEH 451

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            VVS NA+I G+A     EEA  L  +MQ    + P   T  +L+  C     L  G  +
Sbjct: 452 SVVSINALIAGYA-PVNLEEAIILFEKMQ-AEGLNPSEITFASLLDGCGGPEQLILGIQI 509

Query: 301 HGYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           H   ++R L YD   +  SL+  Y KS   + A +LF+  +     + W +MISGL    
Sbjct: 510 HCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNN 569

Query: 356 --------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   ++EM    +    +T +++L +C    S+  G+ IH    + G   +    +
Sbjct: 570 CSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCS 629

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  CGD+ ++  + + +   +D   WN +IV   +NG+ + A++ F  M +Q + 
Sbjct: 630 ALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALRIFNEM-KQAHV 688

Query: 468 SPDSVTLVNVISACGNLELAFEGKSL 493
            PD VT + V++AC +     EG+ +
Sbjct: 689 IPDDVTFLGVLTACSHAGRVSEGRQI 714


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 196/637 (30%), Positives = 319/637 (50%), Gaps = 45/637 (7%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
           D+V+ +  V  S+  G   +GK+ HA  IK  +  +P + + N+ +++YS+ G++  A++
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAF--NPCLFLLNNFLNLYSKWGEMGNAQK 65

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M+ + V+S+N +I G+   G + +A  L  E + M  ++ D  +   ++S C    
Sbjct: 66  LFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEAR-MACLKLDKFSYAGVLSACGQIK 124

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               G+ +HG AI   LG  + + N L+D Y K   +  A LLF +   +++ VSWNS+I
Sbjct: 125 DFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDN-VSWNSLI 183

Query: 353 SGL-----FKEMLYLCSQFSFS-------TLLAILPSC--NSPESLEFGKSIHCWQLKLG 398
           +G      ++EML L  +   +       TL + L SC  N    + +GK++H + +K G
Sbjct: 184 TGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQG 243

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-----E 453
              + +   AL+ MY   G L  A  L  R S N +   +N +I    Q          E
Sbjct: 244 LDLDIVVGTALLDMYAKTGYLGDAIQLF-RTSPNQNVVMYNAMIAGFIQTEDIDKECAYE 302

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNAL 512
           A+K F  M Q+Q   P   T  ++I  C ++E AFE GK +H    K  +  D  + + L
Sbjct: 303 ALKLFSQM-QRQGIKPSDFTFSSIIKICNHIE-AFEYGKQIHAHICKHNIQSDEFIGSTL 360

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           I +Y      +     F S    ++ +W  MI+ ++QN     AL LF  L     +P+E
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDE 420

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
             I ++LSAC  +   R G+Q+HG+    G    + + ++ + MY+              
Sbjct: 421 FIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEE 480

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                  +WS MI +   HG   +AI LF  M + GI P + + + +L+ACSH GLV+EG
Sbjct: 481 IKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L+YY +M ++YD++   +H  CIVD+L R+G+L +A  FI N      P +W  +LS C 
Sbjct: 541 LRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCR 600

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
            + D   GK VAE L +L+P+    Y+ L N+Y   G
Sbjct: 601 IYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAG 637



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 259/526 (49%), Gaps = 40/526 (7%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
            G++ H   IK        L N F+N+Y+K G++ +++  F  M     +S+N ++SG  
Sbjct: 27  HGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYG 86

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
              +  K +  F E   +  + D  S +  ++A   + + + GKVIH L I  G      
Sbjct: 87  GMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQ-- 144

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V +TN LI MY +C  I+ A   F      D VSWN++I G+A  G +EE   LL +M  
Sbjct: 145 VFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMH- 203

Query: 271 MRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
              +  +  T+ + +  C  +L  ++  G+++HGY +++ L  D+++  +L+D Y+K+  
Sbjct: 204 HTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGY 263

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFK----------EMLYLCSQ----------FSF 368
           L  A  LF   +P  ++V +N+MI+G  +          E L L SQ          F+F
Sbjct: 264 LGDAIQLFRT-SPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTF 322

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSL 425
           S+++ I   CN  E+ E+GK IH    K    ++    + L+ +Y   G   D +  F+ 
Sbjct: 323 SSIIKI---CNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNS 379

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             ++    D   W  +I    QNG F+ A+  F  +       PD   +  ++SAC ++ 
Sbjct: 380 TPKL----DIVSWTTMIAGYAQNGQFESALALFYELL-ASGKKPDEFIITTMLSACADVA 434

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
               G+ +HG A+K+ +G    VQN+ I+MY +  ++ SA   FE   N ++ +W+ MI 
Sbjct: 435 AERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMIC 494

Query: 546 AFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
           + +Q+   K  +   EL +     PN+I+ + +L+AC+  G++  G
Sbjct: 495 SNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEG 540



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 261/582 (44%), Gaps = 38/582 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS      ++  LF     + V+++N +I+           +  F E     ++ D  + 
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
             ++SA  Q+     G+V+H L+I  G+     L N+ ++MY KC  ++ +   F     
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL----SY 192
            D VSWN++++G       E+ L    +M  +G + +  +L SA+   +C   L    SY
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSAL--KSCYLNLNNMVSY 231

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H   +K G +    + V  +L+ MY++ G +  A + F     ++VV +NA+I GF
Sbjct: 232 GKTLHGYTVKQGLDLD--IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGF 289

Query: 253 ALNGKFE-----EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
                 +     EA  L  +MQ  + ++P   T  ++I +C        G+ +H +  + 
Sbjct: 290 IQTEDIDKECAYEALKLFSQMQ-RQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKH 348

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            +  D  + ++L++ YS   S       FN+  P  D+VSW +MI+G            L
Sbjct: 349 NIQSDEFIGSTLIELYSLLGSTEDQLKCFNS-TPKLDIVSWTTMIAGYAQNGQFESALAL 407

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F E+L    +     +  +L +C    +   G+ +H + +K G     I  N+ + MY  
Sbjct: 408 FYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAK 467

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G+L +A    + I  N D   W+++I +  Q+GH ++AI  F+ M +     P+ +T +
Sbjct: 468 SGNLDSAKITFEEIK-NPDVVSWSVMICSNAQHGHAKDAINLFELM-KSYGIHPNQITFL 525

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKSASTVFE 530
            V++AC +  L  EG   +  ++K    +   V++      L++  GR  D K  + +  
Sbjct: 526 GVLTACSHGGLVEEGLRYYE-SMKKDYDMKINVKHCTCIVDLLSRAGRLLDAK--NFILN 582

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-EFEPNEIS 571
           S +  +   W  ++S     K  V    +   L E +P E S
Sbjct: 583 SGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESS 624



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 174/370 (47%), Gaps = 15/370 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMI-----TACVENRCVV 55
           +G    +   T+LL  Y+   Y   ++ LF  + N++VV +NAMI     T  ++  C  
Sbjct: 242 QGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
             L  F +M  +GI+    T   I+     +   + G+ +H    K  + +D  + +  +
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            +Y+  G        F+     D VSW T+++G   N   E  L  F E+  SG++ D  
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
            +++ ++A A +     G+ +H   +K G        V NS ISMY++ G++++A+  F 
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVKTGI--GTLAIVQNSQISMYAKSGNLDSAKITFE 479

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLL 293
            +   DVVSW+ +I   A +G  ++A +L    +LM+S  + P+  T + +++ C+   L
Sbjct: 480 EIKNPDVVSWSVMICSNAQHGHAKDAINLF---ELMKSYGIHPNQITFLGVLTACSHGGL 536

Query: 294 LREG-RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           + EG R          +  ++     ++D  S++  L  A+         +  V W +++
Sbjct: 537 VEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLL 596

Query: 353 SG--LFKEML 360
           SG  ++K+++
Sbjct: 597 SGCRIYKDIV 606


>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 191/631 (30%), Positives = 306/631 (48%), Gaps = 64/631 (10%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K +HA  I  G+          +LIS+Y+  G +  A   F  +      S+  II    
Sbjct: 57  KTLHASLIISGHPPD------TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHF 110

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL---- 309
           LN              L R+      T+ +   L   S+LL+    +    +   L    
Sbjct: 111 LNDVHSHVVSF---YNLART------TLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNI 161

Query: 310 ----GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
                 D  ++ SL+D YSK   L  A  +F+ I P   +VSW SMI             
Sbjct: 162 LKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEI-PDRSVVSWTSMIVAYVQNECAEEGL 220

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF  M       +  T+ +++ +C     L  GK +H + +K G   N+    +L++MY
Sbjct: 221 MLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMY 280

Query: 414 INCGDLVAAFSLLQRISHNS-----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           + CGD+  A S+    S ++     D   W  +IV  TQ G+ Q A++ F    +     
Sbjct: 281 VKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTD-KKWYRIL 339

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD-TRVQNALITMYGRCRDIKSAST 527
           P+SVTL +++SAC  LE    GK LH L +K   GLD T ++N+L+ MY +C  I  A  
Sbjct: 340 PNSVTLASLLSACAQLENIVMGKLLHVLVVK--YGLDDTSLRNSLVDMYAKCGLIPDAHY 397

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGV 584
           VF +  + ++ +WN +IS ++Q+ +   AL+LF  +  E   P+ +++V +LSAC  +G 
Sbjct: 398 VFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGA 457

Query: 585 LRHGKQIHGHVFHLGFQENS-FISSALLDMYSNC---------------KSNAAWSSMIS 628
            + G  +HG     G   +S ++ +ALL+ Y+ C               K+   W++MI 
Sbjct: 458 HQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIG 517

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
             G  G G  ++ LF +M    + P +    +LL+ACSHSG+V+EGL  ++ M +E +  
Sbjct: 518 GCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFV 577

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  +H+ C+VD+L R+G LQEA +FI  +P+QP  GV+GA L  C  H +   G+     
Sbjct: 578 PSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRR 637

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + +L P+   YY+ +SN+Y + GRW    E+
Sbjct: 638 MLELHPDQACYYVLISNLYASDGRWGMVKEV 668



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 178/632 (28%), Positives = 298/632 (47%), Gaps = 67/632 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+ AYS       +  +F E  ++ VV+W +MI A V+N C   GL  F  M E  + 
Sbjct: 173 TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLD 232

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T+  +V+A T++ CL QG+ VH   IK G+  +S L    +NMY KCGD+  +   
Sbjct: 233 GNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSV 292

Query: 131 FSGMHCA------DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           F     +      D V W  ++ G     YP+  L  F +  W     ++V+L+S ++A 
Sbjct: 293 FDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSAC 352

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L  +  GK++H L +K G +D+   S+ NSL+ MY++CG I  A   F     KDVVS
Sbjct: 353 AQLENIVMGKLLHVLVVKYGLDDT---SLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVS 409

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN++I G+A +G   EA DL + M+ M S  PD  TVV ++S CA     + G S+HG+A
Sbjct: 410 WNSVISGYAQSGSAYEALDLFNRMR-MESFLPDAVTVVGVLSACASVGAHQIGLSLHGFA 468

Query: 305 IRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           ++  L+   + +  +L++FY+K    + A ++F+ +   N  V+W +MI G         
Sbjct: 469 LKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNA-VTWAAMIGGCGMQGDGVG 527

Query: 355 ---LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVN 407
              LF++ML    + ++  F+TLLA   +C+    +E G  I  +  K L F  +     
Sbjct: 528 SLALFRDMLKEELVPNEVVFTTLLA---ACSHSGMVEEGLMIFDFMCKELNFVPSMKHYA 584

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            ++ +    G+L  A   + ++        +   +  C  + +F       + M +    
Sbjct: 585 CMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELH-- 642

Query: 468 SPDS----VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
            PD     V + N+ ++ G   +  E + +    +K   GL+     +L+ M     D+ 
Sbjct: 643 -PDQACYYVLISNLYASDGRWGMVKEVREM----IKQ-RGLNKVPGVSLVEM-----DVN 691

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP-NEISIVSILSACTQL 582
           + + V       N+   +  I+ F +          F    F P ++I   S  S    L
Sbjct: 692 NTTHV-------NVLQSHLYITLFLR----------FFTPTFHPLSQILPTSKTSLQGHL 734

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
             L H  QIH H+F  G  +++ I++ L+  Y
Sbjct: 735 S-LPHLLQIHAHIFQFGAHQHNLIATRLIGHY 765



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 233/514 (45%), Gaps = 28/514 (5%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG-EMVE 66
           P  T+L++ Y++  +   +  LF+   +    ++  +I     N      + F+      
Sbjct: 69  PPDTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTT 128

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G   D     I++   +Q+  +     +HC  +K+   ADS +    V+ Y+KCG L  
Sbjct: 129 LGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNA-ADSFVLTSLVDAYSKCGKLRD 187

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  +     VSW +++   + N   E+ L+ F  M       +  ++ S V A   
Sbjct: 188 ARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TC---K 240
           LG L  GK +H   IK G E + Y++   SL++MY +CGDI  A   F      TC    
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSYLA--TSLLNMYVKCGDIGDARSVFDEFSVSTCGGGD 305

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V W A+I G+   G  + A +L  + +  R + P+  T+ +L+S CA    +  G+ +
Sbjct: 306 DLVFWTAMIVGYTQRGYPQAALELFTDKKWYR-ILPNSVTLASLLSACAQLENIVMGKLL 364

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   ++  L  D  + NSL+D Y+K   +  A  +F A     D+VSWNS+ISG      
Sbjct: 365 HVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVF-ATTVDKDVVSWNSVISGYAQSGS 422

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-N 407
                 LF  M          T++ +L +C S  + + G S+H + LK G  +++I V  
Sbjct: 423 AYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGT 482

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL++ Y  CGD  +A  +   +   +  + W  +I  C   G    ++  F+ M +++  
Sbjct: 483 ALLNFYAKCGDATSARMVFDGMGEKNAVT-WAAMIGGCGMQGDGVGSLALFRDMLKEE-L 540

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
            P+ V    +++AC +  +  EG  +     K L
Sbjct: 541 VPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKEL 574


>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
 gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
          Length = 734

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 199/713 (27%), Positives = 351/713 (49%), Gaps = 51/713 (7%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           + +GR +H    ++G    S L    V MYAKCG L  ++  F  +   +   WN ++SG
Sbjct: 30  VSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMISG 89

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              +    + L  F +M       +    +SA+AA A LG+L  G+ IH   ++     +
Sbjct: 90  YARSGKNREALELFHKMDIP---PNGFIFASALAACAGLGDLEQGREIHKRVLE-SRSIA 145

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             V V NSL++MY++CG +    + F  M  K++VSWNA+I  F      E+A +L H M
Sbjct: 146 SDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRM 205

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +  R +EP+     +L++ CA    L+ G S+H       L  D++M N+L++ YSK   
Sbjct: 206 KRER-LEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGC 264

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           + +A  +F+ +A   D+ +W SMI+G             +  M   C   + +T +A+L 
Sbjct: 265 MDEALEVFSGLAT-RDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLS 323

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C++   LE GK +H      GF + T+   ALM MY  CG L  A  L  ++    D  
Sbjct: 324 ACST---LEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKM-QQKDYV 379

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFEGKSLH 494
            W+ ++ +  Q G   +A+  F+ M  +  Q + P   T  + + AC     +   K++ 
Sbjct: 380 SWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLP---TFCSALQACSLKRDSRLSKTIR 436

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
            L   S +     ++  L++ Y +C D++ A  +F+   + ++ TW  MI  ++Q     
Sbjct: 437 ELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSK 496

Query: 555 RALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQENSFISSAL 610
            ALELF  ++    EP+ ++  S+L AC+ L     G+++H  +    G + + F+ + L
Sbjct: 497 AALELFHRMKPEGVEPDSVTFSSVLQACSNL---EDGREVHARILAAQGGKMSDFLGNGL 553

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           ++MY+ C                S  +WS++++    HG+  + I+ +  M N G+ P  
Sbjct: 554 INMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDG 613

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            ++I++L++CSH+GL DE   Y+  ++ ++++    EH+ C+VD+L R+G+L EA E I 
Sbjct: 614 VTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELIS 673

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
            +  +P       ML+AC +  D   G + A  +   E      ++ LS +Y 
Sbjct: 674 MID-RPDVVTLNTMLAACKNQQDLHRGARTAAQMQSTE-SCAAPFVLLSQIYA 724



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 235/510 (46%), Gaps = 39/510 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   + +    SL+T Y+        + +F     K++V+WNAMI+A V+       L  
Sbjct: 142 RSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALEL 201

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M  E +  +      +++A   +  L+ G  +H      G+  D  + N  +NMY+K
Sbjct: 202 YHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSK 261

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ +   FSG+   D  +W ++++G     +  +   ++  M     + D VS +SA
Sbjct: 262 CGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRM-----RRDCVSPTSA 316

Query: 181 --VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             VA  +    L  GK +H      G+E      V  +L+ MYS+CG +E AE  F  M 
Sbjct: 317 TFVALLSACSTLEQGKHLHEEVKAFGFE--SITVVETALMFMYSRCGSLEDAEFLFAKMQ 374

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTLISLCADSLLLRE 296
            KD VSW+A++   A  G   +A  L  +M L  M+   P   + +   SL  DS L + 
Sbjct: 375 QKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKT 434

Query: 297 GRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            R +  ++     G D +  +   L+  YSK   + +A  +F+ +    D+++W  MI G
Sbjct: 435 IRELIDWS-----GIDKMDSIRADLVSAYSKCGDMEEARKIFDRMES-RDVLTWTVMIKG 488

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFS 400
                       LF  M     +    T  ++L +C+   +LE G+ +H   L  + G  
Sbjct: 489 YAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACS---NLEDGREVHARILAAQGGKM 545

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           ++ +G N L++MY  CG +  A  + + +  +S  S W+ ++  C ++G   + I T++ 
Sbjct: 546 SDFLG-NGLINMYARCGSMRDARQIFESMDRSSRIS-WSAIMTLCARHGQHDDIIDTYRL 603

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEG 490
           M   +   PD VTL+ ++++C +  L  E 
Sbjct: 604 MV-NEGVVPDGVTLIAILNSCSHAGLTDEA 632



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 242/541 (44%), Gaps = 54/541 (9%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E +++    L+  C     + EGR +H    R   G    +   ++  Y+K   L+ A+ 
Sbjct: 11  ESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKA 70

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            F+ IA  ND V WN MISG            LF +M    + F F++ LA   +C    
Sbjct: 71  AFDEIADKNDFV-WNLMISGYARSGKNREALELFHKMDIPPNGFIFASALA---ACAGLG 126

Query: 383 SLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            LE G+ IH   L+    +++ +  N+L+ MY  CG ++    +   +   +  S WN +
Sbjct: 127 DLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVS-WNAM 185

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLAL 498
           I A  Q  + ++A++ +  M +++   P+     ++++AC   GNL+L   G S+H    
Sbjct: 186 ISAFVQCDYPEQALELYHRM-KRERLEPNGFVFASLLTACASLGNLQL---GSSIHQRIT 241

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
              +  D  ++NALI MY +C  +  A  VF      ++ TW  MI+ ++Q      A  
Sbjct: 242 SLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFA 301

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            +  +  +   P   + V++LSAC+    L  GK +H  V   GF+  + + +AL+ MYS
Sbjct: 302 FYDRMRRDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYS 358

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K   +WS+M++++   G   +A+ LF +M   G++ +  +  S
Sbjct: 359 RCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCS 418

Query: 661 LLSACSHSGLVDEGL-QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            L ACS     D  L +    +++   +         +V    + G ++EA +    +  
Sbjct: 419 ALQACSLKR--DSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMES 476

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV-GYYISLSNMYVALGRWKDAVE 778
           +     W  M+   +  GD+K      EL  +++PE V    ++ S++  A    +D  E
Sbjct: 477 RDVL-TWTVMIKGYAQQGDSKAA---LELFHRMKPEGVEPDSVTFSSVLQACSNLEDGRE 532

Query: 779 I 779
           +
Sbjct: 533 V 533



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 17/359 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +     T+L+  YS     E +  LF +   KD V+W+AM+T+  +       L  F
Sbjct: 342 GFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ EG++    T    + A +     +  + +  L   +G+    S+    V+ Y+KC
Sbjct: 402 RQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKC 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD+  +   F  M   D ++W  ++ G       +  L  F  M   G + D+V+ SS +
Sbjct: 462 GDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVL 521

Query: 182 AASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A + L  G   + +++ A G K+    S ++   N LI+MY++CG +  A + F  M  
Sbjct: 522 QACSNLEDGREVHARILAAQGGKM----SDFLG--NGLINMYARCGSMRDARQIFESMDR 575

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
              +SW+AI+   A +G+ ++  D  + + +   V PD  T++ +++ C+ + L  E   
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIID-TYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACH 634

Query: 300 VHGYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              + I     ++L  ++     ++D   ++  L +AE L + I    D+V+ N+M++ 
Sbjct: 635 YFTWIIS---DFELPHLDEHYQCMVDLLCRAGRLDEAEELISMI-DRPDVVTLNTMLAA 689


>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 634

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 278/553 (50%), Gaps = 47/553 (8%)

Query: 271 MRSVEPDIAT----VVTLI----SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +R+  P +A     V++L+    +  AD+  L    S+H +A+R      + +  +L D 
Sbjct: 7   LRASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADV 66

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           Y+K+  L  A  +F+ + P  ++VSW ++++ L +      +   FS + A    C+S  
Sbjct: 67  YAKAGCLGLALKVFDEM-PHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYA 125

Query: 383 S------------LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
                        L  G+ +H +  KLG  +     N L  +Y  C D+  A + + R+ 
Sbjct: 126 YAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMG 185

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---ASPDSVTLVNVISACGNLELA 487
              D + W  VI A  Q G  +EAI+ F  M ++++   ASP+  T   VI+AC ++   
Sbjct: 186 -TRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWV 244

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD-IKSASTVFESCYNCNLCTWNCMISA 546
             G+ LH  A +        V N+L+T+Y R    + +A  VF      ++ +W+ +IS 
Sbjct: 245 CLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISG 304

Query: 547 FSQNKAEVRALELFRHLEF-----EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           ++Q      A  LFR +        PNE ++ S+LS C     L  G+Q+H      G +
Sbjct: 305 YAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLE 364

Query: 602 ENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAIELFHEM 646
            ++ I SAL+DMY    S                 +W++MI  Y  HG   +A+ELF EM
Sbjct: 365 HHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEM 424

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
           C+ G++P   + I +L+AC H+G V+ GL+Y N M + Y + P  EH+ C+VD+LGR+G+
Sbjct: 425 CHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGR 484

Query: 707 LQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           + EA E I  +    + G VW ++L AC+  G+ + GK+ AE   + EP   G +++++N
Sbjct: 485 INEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMAN 544

Query: 766 MYVALGRWKDAVE 778
           +Y + G+W +A +
Sbjct: 545 LYASKGQWHEAAQ 557



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 230/495 (46%), Gaps = 24/495 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L   Y+       +L +F E  +K+VV+W  ++ +          L  F EM   G+
Sbjct: 60  ATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGV 119

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             DS      ++A      L +GR VH    K G+ +   + N    +YA+C D++ +  
Sbjct: 120 HCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALA 179

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF----REMGWSGEQADNVSLSSAVAASA 185
             S M   D  +W T++S  +     ++ +  F    RE        +  + ++ +AA A
Sbjct: 180 AVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACA 239

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTCKDVVS 244
            +  +  G+ +HA   + G+  +   SV NSL+++Y++  G + AA+  F     KDVVS
Sbjct: 240 DIAWVCLGEQLHAQAARKGFACAR--SVANSLVTLYTRAAGCLSAADAVFRESVVKDVVS 297

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           W+AII G+A  G  E+AF L  EM+       P+  T+ +L+S+CA +  L  GR +H  
Sbjct: 298 WSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTL 357

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+   L +  ++ ++L+D Y KS S+  A+++F+     +D+VSW +MI G         
Sbjct: 358 AVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVK-DDVVSWTAMIVGYAEHGHSKK 416

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALM 410
              LF+EM ++  +    T + +L +C     +E G + ++      G          ++
Sbjct: 417 ALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVV 476

Query: 411 HMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNAS 468
            +    G +  A  L+ +I+ N  D   W  ++ AC   G  +   K   ++M  +   +
Sbjct: 477 DLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGA 536

Query: 469 PDSVTLVNVISACGN 483
              V + N+ ++ G 
Sbjct: 537 GAHVAMANLYASKGQ 551



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 33/421 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFV-----NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           H  S+ A  +  S++ +VFV     ++YAK G L  +   F  M   + VSW T+++   
Sbjct: 40  HAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLT 99

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                 + L  F EM  SG   D+ + ++A+ A A  G LS G+ +HA   KLG + +PY
Sbjct: 100 RAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPY 159

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+  N+L ++Y++C D++ A  A   M  +DV +W  +I  +   G+ +EA +    M  
Sbjct: 160 VA--NTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLR 217

Query: 271 MRS---VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
             S     P+  T   +I+ CAD   +  G  +H  A R+       + NSL+  Y+++ 
Sbjct: 218 EESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAA 277

Query: 328 S-LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL--CSQFSFSTLL 372
             LS A+ +F   + + D+VSW+++ISG            LF+EM +   C + +  TL 
Sbjct: 278 GCLSAADAVFRE-SVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLA 336

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISH 431
           ++L  C +  SL+ G+ +H   +  G  ++ +  +AL+ MY   G ++ A      R+  
Sbjct: 337 SLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRV-- 394

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAF 488
             D   W  +IV   ++GH ++A++ F+ M       PD VT + V++AC   G +EL  
Sbjct: 395 KDDVVSWTAMIVGYAEHGHSKKALELFQEMC-HVGLKPDHVTFIGVLNACCHAGEVELGL 453

Query: 489 E 489
            
Sbjct: 454 R 454



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 8/265 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY-FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF      + SL+T Y+  +    ++ A+F E+  KDVV+W+A+I+   +         
Sbjct: 257 KGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFA 316

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F EM       R +  TL  ++S       L  GR +H L++ AG+   + + +  ++M
Sbjct: 317 LFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDM 376

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G +  ++  FS     D VSW  ++ G   + + +K L  F+EM   G + D+V+ 
Sbjct: 377 YGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTF 436

Query: 178 SSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              + A    GE+  G + ++ +    G    P       ++ +  + G I  AE     
Sbjct: 437 IGVLNACCHAGEVELGLRYLNEMNQIYGL--YPAKEHYGCVVDLLGRAGRINEAEELIGK 494

Query: 237 MTC--KDVVSWNAIIDGFALNGKFE 259
           +    +D V W +++   A  G+ E
Sbjct: 495 IAANERDGVVWTSLLRACAARGEEE 519


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/495 (31%), Positives = 267/495 (53%), Gaps = 41/495 (8%)

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCS 364
           SL DF       + + L+F+ I P  +  ++N M+               L+ +M  L  
Sbjct: 61  SLKDF-------TYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNI 113

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
             +  T   +  +C + E +   +  HC   KLG  N+   VN+++ MY  CG+   A  
Sbjct: 114 SPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARK 173

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   I+   D   WN ++    + G  +EA++ F  + ++    PD ++LV+V+ ACG L
Sbjct: 174 VFDEITEK-DLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGEL 232

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                G+ + G  ++  M +++ + +ALI+MY +C ++ S+  +F+   + +  TWN  I
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           SA++QN     A+ LF  ++    +PN++++ ++LSAC  +G L  GKQ+  +  H G Q
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQ 352

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            + F+++AL+DMY+ C               K++A+W++MISA   HGK  EA+ LF  M
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERM 412

Query: 647 CNSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            + G   RP   + +SLLSAC H+GLVDEG + ++ M   + + P+ EH+ C+VD+L R+
Sbjct: 413 SDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA 472

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L EA++ I+ +P +P     GA+ SAC    +  +G++V ++L +L+P N G YI  S
Sbjct: 473 GHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISS 532

Query: 765 NMYVALGRWKDAVEI 779
            +Y  L  W DA  +
Sbjct: 533 KIYENLNMWDDAARM 547



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 222/473 (46%), Gaps = 55/473 (11%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           S+L   + T + +   +N M+ A         + LH + +M    I  ++ T   +  A 
Sbjct: 68  STLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLAC 127

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
             +  ++  R+ HC   K G+  D    N  V MY +CG+   +   F  +   D VSWN
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWN 187

Query: 144 TIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           +++SG     +  + +  F R    SG + D +SL S + A   LG+L  G+ +    ++
Sbjct: 188 SLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 247

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G + + Y+   ++LISMYS+CG++ ++ R F GM  +D ++WNA I  +A NG  +EA 
Sbjct: 248 RGMKVNSYIG--SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L H M+    V+P+  T+  ++S CA    L  G+ +  YA  R L +D+ +  +L+D 
Sbjct: 306 SLFHSMK-ENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------- 369
           Y+K  SL  A+ +FN +   ND  SWN+MIS L      KE L L  + S          
Sbjct: 365 YAKCGSLESAQRVFNDMPRKND-ASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423

Query: 370 -TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            T +++L +C           +H   +  G+         L  M      +   F L+ +
Sbjct: 424 ITFVSLLSAC-----------VHAGLVDEGYR--------LFDM------MSTLFGLVPK 458

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           I H      ++ ++   ++ GH  EA    + M ++    PD+VTL  + SAC
Sbjct: 459 IEH------YSCMVDLLSRAGHLYEAWDVIEKMPEK----PDNVTLGALHSAC 501



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 224/480 (46%), Gaps = 57/480 (11%)

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           + ++  F+ M  A T +W+         +YP    LY  +M       +N +      A 
Sbjct: 78  HPNDYAFNIMLRATTTTWH---------DYPLTLHLY-HQMKTLNISPNNFTFPFVFLAC 127

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L E+   ++ H    KLG ++  +    NS+++MY +CG+   A + F  +T KD+VS
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHT--VNSMVTMYFRCGENGVARKVFDEITEKDLVS 185

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN+++ G+A  G   EA ++   ++     EPD  ++V+++  C +   L  GR V G+ 
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           + R +  +  + ++L+  YSK   L  +  +F+ + P  D ++WN+ IS           
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM-PSRDFITWNAAISAYAQNGMADEA 304

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF  M       +  TL A+L +C S  +L+ GK +  +    G  ++     AL+ M
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ-QNASPDS 471
           Y  CG L +A  +   +   +D S WN +I A   +G  +EA+  F+ M+ +  +A P+ 
Sbjct: 365 YAKCGSLESAQRVFNDMPRKNDAS-WNAMISALASHGKAKEALSLFERMSDEGGSARPND 423

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +T V+++SAC +  L  EG  L  + + +L GL  ++++                     
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDM-MSTLFGLVPKIEH--------------------- 461

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
                   ++CM+   S+      A ++   +  +P+ +++ ++ SAC +   +  G+++
Sbjct: 462 --------YSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERV 513



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 4/291 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE- 67
           T  S++T Y        +  +F E   KD+V+WN++++   +       +  FG + EE 
Sbjct: 154 TVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREES 213

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  +L+ ++ A  ++  L+ GR V    ++ GM  +S + +  ++MY+KCG+L SS
Sbjct: 214 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSS 273

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F GM   D ++WN  +S    N   ++ +  F  M  +G   + V+L++ ++A A +
Sbjct: 274 RRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASI 333

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  GK +       G +   +V+   +LI MY++CG +E+A+R F  M  K+  SWNA
Sbjct: 334 GALDLGKQMDEYATHRGLQHDIFVAT--ALIDMYAKCGSLESAQRVFNDMPRKNDASWNA 391

Query: 248 IIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREG 297
           +I   A +GK +EA  L   M     S  P+  T V+L+S C  + L+ EG
Sbjct: 392 MISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 34/288 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +    ++L++ YS      SS  +F    ++D +TWNA I+A  +N      +  
Sbjct: 248 RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISL 307

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E G+  +  TL  ++SA   +  L  G+ +   +   G+  D  +    ++MYAK
Sbjct: 308 FHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAK 367

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L S++  F+ M   +  SWN ++S    +   ++ L  F  M   G  A    ++  
Sbjct: 368 CGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFV 427

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              SAC         +HA  +  GY           L  M S            +G+  K
Sbjct: 428 SLLSAC---------VHAGLVDEGYR----------LFDMMS----------TLFGLVPK 458

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            +  ++ ++D  +  G   EA+D++ +M      +PD  T+  L S C
Sbjct: 459 -IEHYSCMVDLLSRAGHLYEAWDVIEKM----PEKPDNVTLGALHSAC 501


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/495 (31%), Positives = 267/495 (53%), Gaps = 41/495 (8%)

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------LFKEMLYLCS 364
           SL DF       + + L+F+ I P  +  ++N M+               L+ +M  L  
Sbjct: 61  SLKDF-------TYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNI 113

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
             +  T   +  +C + E +   +  HC   KLG  N+   VN+++ MY  CG+   A  
Sbjct: 114 SPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARK 173

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   I+   D   WN ++    + G  +EA++ F  + ++    PD ++LV+V+ ACG L
Sbjct: 174 VFDEITEK-DLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGEL 232

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                G+ + G  ++  M +++ + +ALI+MY +C ++ S+  +F+   + +  TWN  I
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           SA++QN     A+ LF  ++    +PN++++ ++LSAC  +G L  GKQ+  +  H G Q
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQ 352

Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            + F+++AL+DMY+ C               K++A+W++MISA   HGK  EA+ LF  M
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERM 412

Query: 647 CNSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            + G   RP   + +SLLSAC H+GLVDEG + ++ M   + + P+ EH+ C+VD+L R+
Sbjct: 413 SDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA 472

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L EA++ I+ +P +P     GA+ SAC    +  +G++V ++L +L+P N G YI  S
Sbjct: 473 GHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISS 532

Query: 765 NMYVALGRWKDAVEI 779
            +Y  L  W DA  +
Sbjct: 533 KIYENLNMWDDAARM 547



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 222/473 (46%), Gaps = 55/473 (11%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           S+L   + T + +   +N M+ A         + LH + +M    I  ++ T   +  A 
Sbjct: 68  STLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLAC 127

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
             +  ++  R+ HC   K G+  D    N  V MY +CG+   +   F  +   D VSWN
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWN 187

Query: 144 TIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           +++SG     +  + +  F R    SG + D +SL S + A   LG+L  G+ +    ++
Sbjct: 188 SLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 247

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G + + Y+   ++LISMYS+CG++ ++ R F GM  +D ++WNA I  +A NG  +EA 
Sbjct: 248 RGMKVNSYIG--SALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L H M+    V+P+  T+  ++S CA    L  G+ +  YA  R L +D+ +  +L+D 
Sbjct: 306 SLFHSMK-ENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------- 369
           Y+K  SL  A+ +FN +   ND  SWN+MIS L      KE L L  + S          
Sbjct: 365 YAKCGSLESAQRVFNDMPRKND-ASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423

Query: 370 -TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            T +++L +C           +H   +  G+         L  M      +   F L+ +
Sbjct: 424 ITFVSLLSAC-----------VHAGLVDEGYR--------LFDM------MSTLFGLVPK 458

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           I H      ++ ++   ++ GH  EA    + M ++    PD+VTL  + SAC
Sbjct: 459 IEH------YSCMVDLLSRAGHLYEAWDVIEKMPEK----PDNVTLGALHSAC 501



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 224/480 (46%), Gaps = 57/480 (11%)

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           + ++  F+ M  A T +W+         +YP    LY  +M       +N +      A 
Sbjct: 78  HPNDYAFNIMLRATTTTWH---------DYPLTLHLY-HQMKTLNISPNNFTFPFVFLAC 127

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L E+   ++ H    KLG ++  +    NS+++MY +CG+   A + F  +T KD+VS
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHT--VNSMVTMYFRCGENGVARKVFDEITEKDLVS 185

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN+++ G+A  G   EA ++   ++     EPD  ++V+++  C +   L  GR V G+ 
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           + R +  +  + ++L+  YSK   L  +  +F+ + P  D ++WN+ IS           
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM-PSRDFITWNAAISAYAQNGMADEA 304

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF  M       +  TL A+L +C S  +L+ GK +  +    G  ++     AL+ M
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ-QNASPDS 471
           Y  CG L +A  +   +   +D S WN +I A   +G  +EA+  F+ M+ +  +A P+ 
Sbjct: 365 YAKCGSLESAQRVFNDMPRKNDAS-WNAMISALASHGKAKEALSLFERMSDEGGSARPND 423

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +T V+++SAC +  L  EG  L  + + +L GL  ++++                     
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDM-MSTLFGLVPKIEH--------------------- 461

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQI 591
                   ++CM+   S+      A ++   +  +P+ +++ ++ SAC +   +  G+++
Sbjct: 462 --------YSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERV 513



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 4/291 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE- 67
           T  S++T Y        +  +F E   KD+V+WN++++   +       +  FG + EE 
Sbjct: 154 TVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREES 213

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  +L+ ++ A  ++  L+ GR V    ++ GM  +S + +  ++MY+KCG+L SS
Sbjct: 214 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSS 273

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F GM   D ++WN  +S    N   ++ +  F  M  +G   + V+L++ ++A A +
Sbjct: 274 RRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASI 333

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  GK +       G +   +V+   +LI MY++CG +E+A+R F  M  K+  SWNA
Sbjct: 334 GALDLGKQMDEYATHRGLQHDIFVAT--ALIDMYAKCGSLESAQRVFNDMPRKNDASWNA 391

Query: 248 IIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREG 297
           +I   A +GK +EA  L   M     S  P+  T V+L+S C  + L+ EG
Sbjct: 392 MISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEG 442



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 34/288 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +    ++L++ YS      SS  +F    ++D +TWNA I+A  +N      +  
Sbjct: 248 RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISL 307

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E G+  +  TL  ++SA   +  L  G+ +   +   G+  D  +    ++MYAK
Sbjct: 308 FHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAK 367

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L S++  F+ M   +  SWN ++S    +   ++ L  F  M   G  A    ++  
Sbjct: 368 CGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFV 427

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              SAC         +HA  +  GY           L  M S            +G+  K
Sbjct: 428 SLLSAC---------VHAGLVDEGYR----------LFDMMS----------TLFGLVPK 458

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            +  ++ ++D  +  G   EA+D++ +M      +PD  T+  L S C
Sbjct: 459 -IEHYSCMVDLLSRAGHLYEAWDVIEKM----PEKPDNVTLGALHSAC 501


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 211/702 (30%), Positives = 325/702 (46%), Gaps = 115/702 (16%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A L  +   + +HA  I +G + S ++   N L++MYS CG I  A R F G+   +V S
Sbjct: 15  ASLRSIPIARKLHAQLIFMGLKSSIFLQ--NHLLNMYSNCGLISDAYRVFGGIMFPNVYS 72

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI------------ATVVTLISLCADSL 292
           WN +I GFA +G+  EA  L  +M    SV  +             AT+    SL    L
Sbjct: 73  WNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKL 132

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFY----------------------------- 323
            L+    +HG+A +   G D  +  S++D Y                             
Sbjct: 133 ALQ----LHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIY 188

Query: 324 --SKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFS 369
             SK  S+ KA  LF A  P  D VSWN+MIS L            F EM     + +  
Sbjct: 189 GYSKYGSVKKALELF-AKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSM 247

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T  ++L +C S   LE+G  +H   +++    +      L+ MY  CG L +A  +   +
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           + ++  S W  +I    Q G  +EA+  F  M +   AS D  TL  V+  C + +    
Sbjct: 308 TEHNAVS-WTSLIGGVAQAGFQEEALVLFNQMREVPVAS-DQFTLATVLGVCLSQKDISI 365

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ LH   +   +     V NAL+TMY +C D+  A+  FE     ++ +W  MI+AFSQ
Sbjct: 366 GEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQ 425

Query: 550 NKAEVRALELFRHLEFEPNEISIVSIL--------------------------------- 576
                +A E F  +  E N IS  S+L                                 
Sbjct: 426 AGDVEKAREYFDKMP-ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFST 484

Query: 577 --SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
             SAC  L VL  G QI      LGF  N  ++++++ MYS C               K+
Sbjct: 485 SISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKN 544

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
             +W++M++ Y  +G+G + IE+F +M N G  P + S +S+LS CSHSG V EG  Y+ 
Sbjct: 545 LVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFL 604

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
           +M +++ + P +EH VC+VD+LGR+G+L++A   I  +P +P   +WGA+L+AC  HG+T
Sbjct: 605 SMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNT 664

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           K+ +   + L +L+ E  G Y  L+N+Y   G+ +    + K
Sbjct: 665 KLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRK 706



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 245/518 (47%), Gaps = 47/518 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S++  YS     + +L LF +   +D V+WN MI+   ++      L+ F EM  +G R 
Sbjct: 185 SMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRP 244

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +S T   ++SA T +  L+ G  +H   ++     D       ++MYAKCG L S+   F
Sbjct: 245 NSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVF 304

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+   + VSW +++ G     + E+ L+ F +M      +D  +L++ +       ++S
Sbjct: 305 DGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDIS 364

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ +HA  I  G + S  V V N+L++MY++CGD+  A  AF  M  +D++SW A+I  
Sbjct: 365 IGEQLHAHTITRGLDSS--VPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITA 422

Query: 252 FALNGKFEEA---FDLLHE--------------------------MQLMRS-VEPDIATV 281
           F+  G  E+A   FD + E                          +Q++R  V+ D  T 
Sbjct: 423 FSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITF 482

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
            T IS CAD  +L  G  +   A +     ++ + NS++  YS+   + +A+ +F++I  
Sbjct: 483 STSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIV- 541

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
           M +LVSWN+M++G            +F++ML + +     + +++L  C+    +  G+ 
Sbjct: 542 MKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQY 601

Query: 390 IHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
                 K  G S  +     ++ +    G L  A +L+ ++    + + W  ++ AC  +
Sbjct: 602 YFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIH 661

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLV-NVISACGNLE 485
           G+ + A    K++ +     P S  L+ N+ S  G ++
Sbjct: 662 GNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQ 699



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/596 (22%), Positives = 261/596 (43%), Gaps = 74/596 (12%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENR---------------CVVM 56
           ++++ +++      +  LF +   +D V+WN+M++    N                 + +
Sbjct: 75  TMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLAL 134

Query: 57  GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            LH F E  + GI  D+     ++    +   +   + V C +    +       N  + 
Sbjct: 135 QLHGFAEKFDFGI--DTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFC----WNSMIY 188

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y+K G +  +   F+ M   DTVSWNT++S    + +  + L  F EM   G + ++++
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            +S ++A   + +L +G  +HA  +++  E    V     LI MY++CG +E+A + F G
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRM--EPCLDVYAGCGLIDMYAKCGRLESARQVFDG 306

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +T  + VSW ++I G A  G  EEA  L ++M+ +  V  D  T+ T++ +C     +  
Sbjct: 307 LTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV-PVASDQFTLATVLGVCLSQKDISI 365

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  +H + I R L   + + N+L+  Y+K   + KA   F  + P+ D++SW +MI+   
Sbjct: 366 GEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFE-LMPIRDIISWTAMITAFS 424

Query: 355 -----------------------------------------LFKEMLYLCSQFSFSTLLA 373
                                                    ++ +ML    +  + T   
Sbjct: 425 QAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFST 484

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
            + +C     L  G  I     KLGFS+N    N+++ MY  CG +  A  +   I   +
Sbjct: 485 SISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKN 544

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
             S WN ++    QNG  ++ I+ F+ M    N  PD ++ V+V+S C +     EG+  
Sbjct: 545 LVS-WNAMMAGYAQNGQGRKVIEIFEKMLNIGNV-PDQISYVSVLSGCSHSGFVSEGQ-Y 601

Query: 494 HGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISA 546
           + L++    G+    ++   ++ + GR   ++ A  +  +  +  N   W  +++A
Sbjct: 602 YFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 235/588 (39%), Gaps = 124/588 (21%)

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA    +   R +H   I   L   + + N L++ YS    +S A  +F  I   N + S
Sbjct: 14  CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPN-VYS 72

Query: 348 WNSMISG------------LFKEML---------YLCSQFSFSTLLAILPSCNSPESLEF 386
           WN+MISG            LF++M           +   F    L A + +  S   L+ 
Sbjct: 73  WNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKL 132

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS------------- 433
              +H +  K  F  +T    +++ MYI CG +  A  +  R  + S             
Sbjct: 133 ALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSK 192

Query: 434 -----------------DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
                            DT  WN +I   +Q+G   E + TF  M   Q   P+S+T  +
Sbjct: 193 YGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEM-WNQGFRPNSMTYAS 251

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+SAC ++     G  LH   ++    LD      LI MY +C  ++SA  VF+     N
Sbjct: 252 VLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN 311

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
             +W  +I   +Q   +  AL LF  +   P   ++ ++ ++L  C     +  G+Q+H 
Sbjct: 312 AVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHA 371

Query: 594 HVFHLGFQENSFISSALLDMYSNC----KSNAA-----------WSSMISAYGYHGKGWE 638
           H    G   +  +++AL+ MY+ C    K+N A           W++MI+A+   G   +
Sbjct: 372 HTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEK 431

Query: 639 AIELFHEMCNSGIRPTKSSVI--SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-----T 691
           A E F +M      P ++ +   S+L+     G  +EGL+ Y  ML E  V+ +     T
Sbjct: 432 AREYFDKM------PERNVISWNSMLATYMQRGYWEEGLKVYIQMLRE-GVKTDWITFST 484

Query: 692 EHHVC------------------------------IVDMLGRSGKLQEAYEFIKNLPIQP 721
               C                              +V M  R G+++EA +   ++ +  
Sbjct: 485 SISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI-VMK 543

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKL-----EPENVGYYISLS 764
               W AM++  + +G    G++V E+  K+      P+ + Y   LS
Sbjct: 544 NLVSWNAMMAGYAQNGQ---GRKVIEIFEKMLNIGNVPDQISYVSVLS 588



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 196/462 (42%), Gaps = 63/462 (13%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           +  C S  S+   + +H   + +G  ++    N L++MY NCG +  A+ +   I    +
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMF-PN 69

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV--------TLVNVISACGNLEL 486
              WN +I     +G  +EA K F+ M ++ + S +S+         L   I A G+L  
Sbjct: 70  VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGY 129

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
                 LHG A K   G+DT V+ +++ MY +C  +  A  VF    N +L  WN MI  
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189

Query: 547 FSQNKAEVRALELFRHLE----------------------------------FEPNEISI 572
           +S+  +  +ALELF  +                                   F PN ++ 
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTY 249

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------K 618
            S+LSACT +  L  G  +H  +  +    + +    L+DMY+ C              +
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTE 309

Query: 619 SNA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
            NA +W+S+I      G   EA+ LF++M    +   + ++ ++L  C     +  G Q 
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQL 369

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + + +    +         +V M  + G + +A    + +PI+     W AM++A S  G
Sbjct: 370 HAHTITR-GLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIIS-WTAMITAFSQAG 427

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           D +  +   E   K+   NV  + S+   Y+  G W++ +++
Sbjct: 428 DVEKAR---EYFDKMPERNVISWNSMLATYMQRGYWEEGLKV 466



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 117/247 (47%), Gaps = 2/247 (0%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+++TA+S     E +   F +   ++V++WN+M+   ++      GL  + +M+ EG++
Sbjct: 417 TAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T    +SA   +  L  G  +   + K G  ++ S+ N  V MY++CG +  ++  
Sbjct: 477 TDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKM 536

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS +   + VSWN +M+G   N    K +  F +M   G   D +S  S ++  +  G +
Sbjct: 537 FSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFV 596

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
           S G+  + L +   +  SP       ++ +  + G +E A+     M  K +   W A++
Sbjct: 597 SEGQY-YFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALL 655

Query: 250 DGFALNG 256
               ++G
Sbjct: 656 AACRIHG 662



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++  + S++T YS     E +  +F     K++V+WNAM+    +N      +  F
Sbjct: 509 GFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIF 568

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV-FVNMYAK 120
            +M+  G   D  + + ++S  +    + +G+       K   I+  S   V  V++  +
Sbjct: 569 EKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGR 628

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
            G L  ++   + M      + W  +++ C +H N
Sbjct: 629 AGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGN 663


>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
 gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
          Length = 734

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 200/718 (27%), Positives = 352/718 (49%), Gaps = 59/718 (8%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           + +GR +H    ++G    S L    V MYAKCG L  ++  F  +   +   WN ++SG
Sbjct: 30  VSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMISG 89

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              +    + L  F +M       +    +SA+AA A LG+L  G+ IH   +     +S
Sbjct: 90  YARSGKNREALELFHKMDIP---PNGFIFASALAACAGLGDLEQGREIHKRVL-----ES 141

Query: 209 PYVS----VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           P ++    V NSL++MY++CG +    + F  M  K++VSWNA+I  F      E+A +L
Sbjct: 142 PSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALEL 201

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            H M+  R +EP+     +L++ CA    L  G S+H       L  D++M N+L++ YS
Sbjct: 202 YHRMKRER-LEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYS 260

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL 372
           K   + +A  +F+ +A   D+ +W SMI+G             +  M   C   + +T +
Sbjct: 261 KCGCMDEALEVFSGLAT-RDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFV 319

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           A+L +C++   LE GK +H      GF + T+   ALM MY  CG L  A  L  ++   
Sbjct: 320 ALLSACST---LEQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKM-QQ 375

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFEG 490
            D   W+ ++ +  Q G   +A+  F+ M  +  Q + P   T  + + AC     +   
Sbjct: 376 KDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLP---TFCSALQACSLKRDSRLS 432

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K++  L   S +     ++  L++ Y +C D++ A  +F+   + ++ TW  MI  ++Q 
Sbjct: 433 KTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQ 492

Query: 551 KAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQENSFI 606
                ALELF  ++    EP+ ++  S+L AC+ L     G+++H  +    G + + F+
Sbjct: 493 GDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNL---EDGREVHARILAAQGGKMSDFL 549

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L++MY+ C                S  +WS++++    HG+  + I+ +  M N G+
Sbjct: 550 GNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGV 609

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            P   ++I++L++CSH+GL DE   Y+  ++ ++++    EH+ C+VD+L R+G+L EA 
Sbjct: 610 VPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAE 669

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           E I  +  +P       ML+AC +  D   G + A  +   E      ++ LS +Y  
Sbjct: 670 ELISMID-RPDVVTLNTMLAACKNQQDLHRGARTAAQMQSTE-SCAAPFVLLSQIYAG 725



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 232/499 (46%), Gaps = 39/499 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+T Y+        + +F     K++V+WNAMI+A V+       L  +  M  E +  
Sbjct: 153 SLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEP 212

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +      +++A   +  L+ G  +H      G+  D  + N  +NMY+KCG ++ +   F
Sbjct: 213 NGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVF 272

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA--VAASACLGE 189
           SG+   D  +W ++++G     +  +   ++      G + D VS +SA  VA  +    
Sbjct: 273 SGLATRDVFTWTSMIAGYAQLGFGSEAFAFY-----DGMRRDCVSPTSATFVALLSACST 327

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK +H      G+E      V  +L+ MYS+CG +E AE  F  M  KD VSW+A++
Sbjct: 328 LEQGKHLHEEVKAFGFE--SITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMV 385

Query: 250 DGFALNGKFEEAFDLLHEMQL--MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
              A  G   +A  L  +M L  M+   P   + +   SL  DS L +  R +  ++   
Sbjct: 386 TSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWS--- 442

Query: 308 LLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
             G D +  +   L+  YSK   + +A  +F+ +    D+++W  MI G           
Sbjct: 443 --GIDKMDSIRADLVSAYSKCGDMEEARKIFDRMES-RDVLTWTVMIKGYAQQGDSKAAL 499

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIGVNALMH 411
            LF  M     +    T  ++L +C+   +LE G+ +H   L  + G  ++ +G N L++
Sbjct: 500 ELFHRMKPEGVEPDSVTFSSVLQACS---NLEDGREVHARILAAQGGKMSDFLG-NGLIN 555

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A  + + +  +S  S W+ ++  C ++G   + I T++ M   +   PD 
Sbjct: 556 MYARCGSMRDARQIFESMDRSSRIS-WSAIMTLCARHGQHDDIIDTYRLMV-NEGVVPDG 613

Query: 472 VTLVNVISACGNLELAFEG 490
           VTL+ ++++C +  L  E 
Sbjct: 614 VTLIAILNSCSHAGLTDEA 632



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 242/541 (44%), Gaps = 54/541 (9%)

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E +++    L+  C     + EGR +H    R   G    +   ++  Y+K   L+ A+ 
Sbjct: 11  ESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKA 70

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            F+ IA  ND V WN MISG            LF +M    + F F++ LA   +C    
Sbjct: 71  AFDEIADKNDFV-WNLMISGYARSGKNREALELFHKMDIPPNGFIFASALA---ACAGLG 126

Query: 383 SLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            LE G+ IH   L+    +++ +  N+L+ MY  CG ++    +   +   +  S WN +
Sbjct: 127 DLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVS-WNAM 185

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLAL 498
           I A  Q  + ++A++ +  M +++   P+     ++++AC   GNLEL   G S+H    
Sbjct: 186 ISAFVQCDYPEQALELYHRM-KRERLEPNGFVFASLLTACASLGNLEL---GSSIHQRIT 241

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
              +  D  ++NALI MY +C  +  A  VF      ++ TW  MI+ ++Q      A  
Sbjct: 242 SLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFA 301

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
            +  +  +   P   + V++LSAC+    L  GK +H  V   GF+  + + +AL+ MYS
Sbjct: 302 FYDGMRRDCVSPTSATFVALLSACS---TLEQGKHLHEEVKAFGFESITVVETALMFMYS 358

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
            C               K   +WS+M++++   G   +A+ LF +M   G++ +  +  S
Sbjct: 359 RCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCS 418

Query: 661 LLSACSHSGLVDEGL-QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            L ACS     D  L +    +++   +         +V    + G ++EA +    +  
Sbjct: 419 ALQACSLK--RDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRMES 476

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV-GYYISLSNMYVALGRWKDAVE 778
           +     W  M+   +  GD+K      EL  +++PE V    ++ S++  A    +D  E
Sbjct: 477 RDVL-TWTVMIKGYAQQGDSKAA---LELFHRMKPEGVEPDSVTFSSVLQACSNLEDGRE 532

Query: 779 I 779
           +
Sbjct: 533 V 533



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 166/353 (47%), Gaps = 11/353 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +    +L+  YS     + +L +F     +DV TW +MI    +         F+
Sbjct: 244 GLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFY 303

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + +   S T + ++SA +    L+QG+ +H      G  + + +    + MY++C
Sbjct: 304 DGMRRDCVSPTSATFVALLSACST---LEQGKHLHEEVKAFGFESITVVETALMFMYSRC 360

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +E  F+ M   D VSW+ +++       P K L  FR+M   G Q    +  SA+
Sbjct: 361 GSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSAL 420

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +   +    K I  L    G +     S+   L+S YS+CGD+E A + F  M  +D
Sbjct: 421 QACSLKRDSRLSKTIRELIDWSGIDKMD--SIRADLVSAYSKCGDMEEARKIFDRMESRD 478

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V++W  +I G+A  G  + A +L H M+    VEPD  T  +++  C++   L +GR VH
Sbjct: 479 VLTWTVMIKGYAQQGDSKAALELFHRMK-PEGVEPDSVTFSSVLQACSN---LEDGREVH 534

Query: 302 GYAIRRLLG-YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
              +    G     + N L++ Y++  S+  A  +F ++   +  +SW+++++
Sbjct: 535 ARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESM-DRSSRISWSAIMT 586



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 169/359 (47%), Gaps = 17/359 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +     T+L+  YS     E +  LF +   KD V+W+AM+T+  +       L  F
Sbjct: 342 GFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLF 401

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+ EG++    T    + A +     +  + +  L   +G+    S+    V+ Y+KC
Sbjct: 402 RQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKC 461

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD+  +   F  M   D ++W  ++ G       +  L  F  M   G + D+V+ SS +
Sbjct: 462 GDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVL 521

Query: 182 AASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            A + L  G   + +++ A G K+    S ++   N LI+MY++CG +  A + F  M  
Sbjct: 522 QACSNLEDGREVHARILAAQGGKM----SDFLG--NGLINMYARCGSMRDARQIFESMDR 575

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
              +SW+AI+   A +G+ ++  D  + + +   V PD  T++ +++ C+ + L  E   
Sbjct: 576 SSRISWSAIMTLCARHGQHDDIID-TYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACH 634

Query: 300 VHGYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              + I     ++L  ++     ++D   ++  L +AE L + I    D+V+ N+M++ 
Sbjct: 635 YFTWIIS---DFELPHLDEHYQCMVDLLCRAGRLDEAEELISMI-DRPDVVTLNTMLAA 689


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/609 (29%), Positives = 304/609 (49%), Gaps = 39/609 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ G+ +H+  I  G +   Y+   N L+ MY +CG ++ A  AF G+  ++V SW  +I
Sbjct: 18  LADGRRVHSQMISNGLDGDTYLG--NLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILI 75

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                NG+  E  +LL  M L    E +  T ++L+  C+ +  L  G+ +H     + L
Sbjct: 76  SLLVQNGEASEGLELLKFMDL-EGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGL 134

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D++  N+L++ Y+  +SL +A L+F  +    D+VSW  +IS             L++
Sbjct: 135 ETDIITGNALLNMYTTCDSLDEARLVFERMV-FRDVVSWTIIISAYAHAGYPLEALQLYR 193

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M    S+    TL+++L +C S  +L  GK+IH   +  G   +     A++  Y  C 
Sbjct: 194 RMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCE 253

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  +  RI  + D  CWN +I A  QN   ++A   +  M + Q   P+ VTL+ +
Sbjct: 254 AVDDARQVFDRI-MDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQ-MRPNDVTLITL 311

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN--C 535
           + +C +      G SLH  A        T V NALI MY +C  +++A+ VF    N   
Sbjct: 312 LDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTT 371

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIH 592
           N+ TWN MI A +Q    + AL+++  +  E    ++++  ++L+ C   G    G+++H
Sbjct: 372 NVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVH 431

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
                 G   +  + ++L+ +Y  C               K+  +WSS+++AY  +G+  
Sbjct: 432 SRSLATGCCSD-VVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEED 490

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
            A  LF  M   G+ P   +  S+L ACSH+GL DEG  Y+ +M  ++ + P  EH+ C+
Sbjct: 491 RARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCM 550

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           V++L +SG++++A  F+  +P+QP    W ++L AC  H D + G   A+ L   EP N 
Sbjct: 551 VNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNS 610

Query: 758 GYYISLSNM 766
             Y+ L N+
Sbjct: 611 AAYVLLYNI 619



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 263/516 (50%), Gaps = 22/516 (4%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR VH   I  G+  D+ L N+ V MY +CG L+ +   F G+H  +  SW  ++S 
Sbjct: 18  LADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISL 77

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + N    + L   + M   G +A+ ++  S + A +  G+LS GK IH      G E  
Sbjct: 78  LVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETD 137

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             +   N+L++MY+ C  ++ A   F  M  +DVVSW  II  +A  G   EA  L   M
Sbjct: 138 --IITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRM 195

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +   S  PD  T+++++  CA    L EG+++H   +   +  D+ +  +++ FY K  +
Sbjct: 196 EQEFS-RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEA 254

Query: 329 LSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILP 376
           +  A  +F+ I    D+V WN+MI              L+ EM+    + +  TL+ +L 
Sbjct: 255 VDDARQVFDRIMD-KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLD 313

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL-LQRISHNSDT 435
           SC+S   +E G S+H      G+ ++T  VNAL++MY  CG L  A  + ++  +  ++ 
Sbjct: 314 SCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNV 373

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +IVA  Q     EA++ +  M Q+   + D VT   V++ C N      G+ +H 
Sbjct: 374 ITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASD-VTYGTVLAVCANFGDFTTGREVHS 432

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            +L +    D  VQN+LI +YG C ++++A T FES  + N+ +W+ +++A+++N  E R
Sbjct: 433 RSLATGCCSDV-VQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDR 491

Query: 556 ALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
           A  LF  +  +   PN ++  S+L AC+  G+   G
Sbjct: 492 ARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEG 527



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 229/494 (46%), Gaps = 25/494 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      + + A F     ++V +W  +I+  V+N     GL     M  EG   +
Sbjct: 43  LVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEAN 102

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T + ++ A +    L  G+ +H      G+  D    N  +NMY  C  L+ +   F 
Sbjct: 103 KITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFE 162

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   D VSW  I+S   H  YP + L  +R M     + D V+L S + A A L  L  
Sbjct: 163 RMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVE 222

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK IH   +  G E   +V    +++S Y +C  ++ A + F  +  KD+V WNA+I  +
Sbjct: 223 GKTIHERIVASGVETDVFVGT--AVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAY 280

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A N   E+AF L  EM +   + P+  T++TL+  C+ +  +  G S+H  A  R     
Sbjct: 281 AQNHCEEKAFALYLEM-VENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSH 339

Query: 313 LLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISGLFKEMLYL--------- 362
             ++N+L++ Y+K  SL  A  +F  A     ++++WN+MI    +E L L         
Sbjct: 340 TSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRM 399

Query: 363 ------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  S  ++ T+LA+   C +      G+ +H   L  G  ++ +  N+L+ +Y  C
Sbjct: 400 NQEGIKASDVTYGTVLAV---CANFGDFTTGREVHSRSLATGCCSDVVQ-NSLICLYGGC 455

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G+L AA +  + ++  +  S W+ ++ A  +NG    A   F +M  Q    P+ VT  +
Sbjct: 456 GNLEAAQTAFESVASKNVVS-WSSIVAAYARNGEEDRARNLFWTM-NQDGVLPNIVTFTS 513

Query: 477 VISACGNLELAFEG 490
           V+ AC +  LA EG
Sbjct: 514 VLHACSHAGLADEG 527



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/503 (25%), Positives = 237/503 (47%), Gaps = 44/503 (8%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           I T   L+    +S  L +GR VH   I   L  D  + N L+  Y +  SL  A   F 
Sbjct: 2   IDTYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFR 61

Query: 338 AIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            I   N + SW  +IS             L K M    ++ +  T +++L +C+    L 
Sbjct: 62  GIHQRN-VFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLS 120

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK IH      G   + I  NAL++MY  C  L  A  + +R+    D   W I+I A 
Sbjct: 121 LGKKIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFR-DVVSWTIIISAY 179

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
              G+  EA++ ++ M +Q+ + PD+VTL++V+ AC +L    EGK++H   + S +  D
Sbjct: 180 AHAGYPLEALQLYRRM-EQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETD 238

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-- 563
             V  A+++ YG+C  +  A  VF+   + ++  WN MI A++QN  E +A  L+  +  
Sbjct: 239 VFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVE 298

Query: 564 -EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--N 620
            +  PN+++++++L +C+    +  G  +H      G+  ++ + +AL++MY+ C S  N
Sbjct: 299 NQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLEN 358

Query: 621 A---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           A                W++MI A        EA++++H M   GI+ +  +  ++L+ C
Sbjct: 359 ATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVC 418

Query: 666 SHSGLVDEGLQYYNNMLEE---YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           ++ G    G + ++  L      DV   +   +C+    G     Q A+E + +  +   
Sbjct: 419 ANFGDFTTGREVHSRSLATGCCSDVVQNS--LICLYGGCGNLEAAQTAFESVASKNVVS- 475

Query: 723 PGVWGAMLSACSHHGDTKMGKQV 745
              W ++++A + +G+    + +
Sbjct: 476 ---WSSIVAAYARNGEEDRARNL 495



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 170/356 (47%), Gaps = 7/356 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G    + T  +LL  Y+     + +  +F     +DVV+W  +I+A       +  L  
Sbjct: 132 KGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQL 191

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           +  M +E  R D+ TL+ ++ A   +  L +G+ +H   + +G+  D  +    V+ Y K
Sbjct: 192 YRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGK 251

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  ++ +   F  +   D V WN ++     N+  EK    + EM  +  + ++V+L + 
Sbjct: 252 CEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITL 311

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + + +   ++  G  +H      GY    + SV N+LI+MY++CG +E A R F   T +
Sbjct: 312 LDSCSSTCKMERGSSLHREAAARGY--LSHTSVVNALINMYAKCGSLENATRVFIEATNR 369

Query: 241 --DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
             +V++WN +I   A      EA  + H M     ++    T  T++++CA+      GR
Sbjct: 370 TTNVITWNTMIVANAQEDLNLEALQIYHRMN-QEGIKASDVTYGTVLAVCANFGDFTTGR 428

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            VH  ++      D++  NSL+  Y    +L  A+  F ++A  N +VSW+S+++ 
Sbjct: 429 EVHSRSLATGCCSDVV-QNSLICLYGGCGNLEAAQTAFESVASKN-VVSWSSIVAA 482


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 190/615 (30%), Positives = 316/615 (51%), Gaps = 48/615 (7%)

Query: 201 IKLGYE--DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
           +KL ++  D P      +L+S  ++   +E A + F G+    +  WNA+I G A  G  
Sbjct: 100 VKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNR 159

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMN 317
           + AF L  +M  M  V+ D  T  T++SLC+  L    GR VH   I+   LG+  ++ N
Sbjct: 160 DFAFGLFRDMNKM-GVKADKYTFATMLSLCSLELF-DYGRHVHSVVIKSGFLGWTSVV-N 216

Query: 318 SLMDFYSKSNSLSKAELLFNAI--APMNDLVSWNSMISG------------LFKEMLYLC 363
           SL+  Y K   +  A  +F         D VS+N+MI G            +F++M   C
Sbjct: 217 SLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGC 276

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
              +  T ++++ SC+S   L  G       +K+GF       NA+M MY   G+++   
Sbjct: 277 FDPTEVTFVSVMSSCSS---LRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQ 333

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           ++ + +    D   WNI++    Q    +EA+ ++  M +++   PD  T  ++++A  +
Sbjct: 334 NIFEGMEER-DVVSWNIMVSMFLQENLEEEAMLSYLKM-RREGIEPDEFTYGSLLAATDS 391

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L++    + +H L  KS + +   V NAL++ Y R   IK A  +F      +L +WN +
Sbjct: 392 LQVV---EMIHSLLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSI 447

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS F  N   ++ LE F  L   + +PN  S+  +LS C+ +  + HGKQ+HG++   GF
Sbjct: 448 ISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGF 507

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
                + +AL+ MY+ C               +    W+++ISAY  HG+G EA+  F  
Sbjct: 508 SSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEA 567

Query: 646 MCNS-GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           M  S GI+P +++  S+LSACSH+GLVD+G++ ++ M++ Y   P  +H  CIVD+LGRS
Sbjct: 568 MQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRS 627

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G L EA   IK+        +  ++ SAC+ HG+  +G+ VA L+ + +  N   Y+ LS
Sbjct: 628 GYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLS 687

Query: 765 NMYVALGRWKDAVEI 779
           N+  A G+W++A  +
Sbjct: 688 NICAAAGQWEEAANL 702



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 186/690 (26%), Positives = 316/690 (45%), Gaps = 100/690 (14%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKC-GDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           +H L+++ G+ A S + N  +++YAK   DL S + TF  + C D  SW T++S C   +
Sbjct: 67  LHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLD 126

Query: 154 YPEKCLLY-------------------------------FREMGWSGEQADNVSLSSAVA 182
             E  L                                 FR+M   G +AD  + ++ + 
Sbjct: 127 SVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATML- 185

Query: 183 ASACLGEL-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI----EAAERAFWGM 237
            S C  EL  YG+ +H++ IK G+    + SV NSLI+MY +CG +    E  E A  G 
Sbjct: 186 -SLCSLELFDYGRHVHSVVIKSGFLG--WTSVVNSLITMYFKCGCVVDACEVFEEAEEGG 242

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           + +D VS+NA+IDGFA   + E+AF +  +MQ     +P   T V+++S C+    LR G
Sbjct: 243 S-RDYVSYNAMIDGFASVERSEDAFLIFRDMQ-KGCFDPTEVTFVSVMSSCSS---LRAG 297

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
                 AI+      + + N++M  YS    + + + +F  +    D+VSWN M+S   +
Sbjct: 298 CQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEE-RDVVSWNIMVSMFLQ 356

Query: 358 EML-------YL--------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           E L       YL          +F++ +LLA      + +SL+  + IH    K G    
Sbjct: 357 ENLEEEAMLSYLKMRREGIEPDEFTYGSLLA------ATDSLQVVEMIHSLLCKSGLVKI 410

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
            + +NAL+  Y   G +  AF +   + + S  S WN +I     NGH  + ++ F ++ 
Sbjct: 411 EV-LNALVSAYCRHGKIKRAFQIFSGVPYKSLIS-WNSIISGFLMNGHPLQGLEQFSALL 468

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
             Q   P++ +L  V+S C ++     GK +HG  L+     +  + NAL+TMY +C  +
Sbjct: 469 STQ-VKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSL 527

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSA 578
             A  VF++    +  TWN +ISA++Q+     A+  F  ++     +P++ +  S+LSA
Sbjct: 528 DKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSA 587

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWE 638
           C+  G++  G +I                  ++ +Y    S   +S ++   G  G   E
Sbjct: 588 CSHAGLVDDGIRIF---------------DTMVKVYGFVPSVDHFSCIVDLLGRSGYLDE 632

Query: 639 AIELFHEMCNSGIRPTKSSVI-SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           A      +  SG     S++  SL SAC+  G +  G      +LE     P    +V +
Sbjct: 633 A----ERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTVARLILERDHNNPSV--YVLL 686

Query: 698 VDMLGRSGKLQEA---YEFIKNLPIQPKPG 724
            ++   +G+ +EA    E ++      +PG
Sbjct: 687 SNICAAAGQWEEAANLREMMREFGTIKQPG 716



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 162/551 (29%), Positives = 263/551 (47%), Gaps = 40/551 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE--NRCVVMGLHFFGEMVEEG 68
           T+LL+A + +   E +L +F       +  WNA+IT C E  NR    GL  F +M + G
Sbjct: 116 TTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGL--FRDMNKMG 173

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ D  T   ++S L  +     GR VH + IK+G +  +S+ N  + MY KCG +  + 
Sbjct: 174 VKADKYTFATMLS-LCSLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDAC 232

Query: 129 CTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
             F         D VS+N ++ G       E   L FR+M         V+  S +  S+
Sbjct: 233 EVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVM--SS 290

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           C   L  G    +  IK+G+     V+V N++++MYS  G++   +  F GM  +DVVSW
Sbjct: 291 C-SSLRAGCQAQSQAIKMGFVGC--VAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSW 347

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           N ++  F      EEA  +L  +++ R  +EPD  T  +L++   DSL + E   +H   
Sbjct: 348 NIMVSMFLQENLEEEA--MLSYLKMRREGIEPDEFTYGSLLA-ATDSLQVVE--MIHSLL 402

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
            +  L   + ++N+L+  Y +   + +A  +F+ + P   L+SWNS+ISG       L  
Sbjct: 403 CKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGV-PYKSLISWNSIISGFLMNGHPLQG 460

Query: 365 QFSFSTLLA------------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              FS LL+            +L  C+S  ++  GK +H + L+ GFS+     NAL+ M
Sbjct: 461 LEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTM 520

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CG L  A  +   +    DT  WN +I A  Q+G  +EA+  F++M       PD  
Sbjct: 521 YAKCGSLDKALRVFDAMVER-DTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQA 579

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           T  +V+SAC +  L  +G  +    +K + G    V +   ++ + GR   +  A  V +
Sbjct: 580 TFTSVLSACSHAGLVDDGIRIFDTMVK-VYGFVPSVDHFSCIVDLLGRSGYLDEAERVIK 638

Query: 531 SCY---NCNLC 538
           S Y   + N+C
Sbjct: 639 SGYFGAHSNIC 649



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 238/505 (47%), Gaps = 31/505 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET---CNKDVVTWNAMITACVENRCVVMGL 58
           GFL       SL+T Y        +  +F E     ++D V++NAMI             
Sbjct: 207 GFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAF 266

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F +M ++G  FD T +   VS ++  + L+ G      +IK G +   ++ N  + MY
Sbjct: 267 LIFRDM-QKGC-FDPTEV-TFVSVMSSCSSLRAGCQAQSQAIKMGFVGCVAVNNAMMTMY 323

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +  G++   +  F GM   D VSWN ++S  L  N  E+ +L + +M   G + D  +  
Sbjct: 324 SGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYG 383

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S +AA+     L   ++IH+L  K G      + V N+L+S Y + G I+ A + F G+ 
Sbjct: 384 SLLAAT---DSLQVVEMIHSLLCKSGLVK---IEVLNALVSAYCRHGKIKRAFQIFSGVP 437

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            K ++SWN+II GF +NG   +  +    + L   V+P+  ++  ++S+C+    +  G+
Sbjct: 438 YKSLISWNSIISGFLMNGHPLQGLEQFSAL-LSTQVKPNAYSLSLVLSICSSMSAMSHGK 496

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
            VHGY +R     ++ + N+L+  Y+K  SL KA  +F+A+    D ++WN++IS   + 
Sbjct: 497 QVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVE-RDTITWNAIISAYAQH 555

Query: 358 ---EMLYLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTI 404
              E    C +            +T  ++L +C+    ++ G  I    +K+ GF  +  
Sbjct: 556 GRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVD 615

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             + ++ +    G L  A  +++     + ++ CW++   AC  +G+        + + +
Sbjct: 616 HFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSL-FSACAAHGNLGLGRTVARLILE 674

Query: 464 QQNASPDS-VTLVNVISACGNLELA 487
           + + +P   V L N+ +A G  E A
Sbjct: 675 RDHNNPSVYVLLSNICAAAGQWEEA 699



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/281 (20%), Positives = 120/281 (42%), Gaps = 56/281 (19%)

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N ++ A  ++    +++K F  +    + +PD   L   I+A  N   A  G  LH LA+
Sbjct: 15  NHMLAALARSNQHTQSLKLF--VHAHSSFTPDHYILSTAITAAANARRAAFGAQLHALAV 72

Query: 499 KSLMGLDTRVQNALITMYGR----------------CRDIKSASTVFESCYNCN------ 536
           ++ +G  + V N+L+++Y +                C D  S +T+  +C   +      
Sbjct: 73  RTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHAL 132

Query: 537 ----------LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLG 583
                     +  WN +I+  ++      A  LFR +     + ++ +  ++LS C+ L 
Sbjct: 133 KVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCS-LE 191

Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------------KSNAAWSS 625
           +  +G+ +H  V   GF   + + ++L+ MY  C                  +   ++++
Sbjct: 192 LFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNA 251

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
           MI  +    +  +A  +F +M      PT+ + +S++S+CS
Sbjct: 252 MIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS 292


>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
 gi|194706472|gb|ACF87320.1| unknown [Zea mays]
 gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
          Length = 583

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 267/518 (51%), Gaps = 32/518 (6%)

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           CA   L R GR+VHG A+    G D  + N+++  Y +   ++ AE +F A+ P    VS
Sbjct: 48  CAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVAL-PSRTTVS 106

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN++I+G            +F+ M+        ++++++LP+C     L  G+++H   +
Sbjct: 107 WNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAV 166

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             G        NAL+ MY  CG L  A  +    S++ D   W ++I A   N H  +A 
Sbjct: 167 VRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAF 226

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
                M     A P++VT+ +++SAC +L      K  H L ++  +G D  V+ AL+  
Sbjct: 227 ALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDC 286

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  +     V E        TWN  IS ++Q     +AL LF+ +  E   P+  ++
Sbjct: 287 YAKCGYMGVIDMVVEKGSR-RTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATM 345

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            S++ A  +   L     IH  +   G   ++ I++ L+D+Y+                 
Sbjct: 346 ASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPE 405

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
           K   AW+++I+ YG HG    A+ L+  M   G+ P   ++ SLL +CSH+G+VDEGL+ 
Sbjct: 406 KDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRL 465

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +N+M   + + P  EH++C+VDMLGR+G+++EAY  I+++P +P   VW ++L AC  H 
Sbjct: 466 FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHE 525

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           + + G+  A+ LF+LEP+NVG Y+ L  +Y A  RW D
Sbjct: 526 NVEFGEVAAKHLFELEPDNVGNYVLLGKVYAAAERWSD 563



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 244/523 (46%), Gaps = 36/523 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD  T      A   +   + GR VH  ++ AG  +D+ + N  V+MY +C D+ ++E  
Sbjct: 36  FDHLTFTFAAKACAGLRLRRHGRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAV 95

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +    TVSWNT+++GC+ +   E+ L  F  M   G   D  S+ S + A A   +L
Sbjct: 96  FVALPSRTTVSWNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDL 155

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAII 249
             G+ +H L +  G     YV+V N+LI MY +CG +E A R F   +  KDVVSW  +I
Sbjct: 156 HTGRAVHRLAVVRGL--GKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMI 213

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             + LN    +AF L  EM +    +P+  T+  L+S CA  L  +  +  H   IR  L
Sbjct: 214 GAYVLNDHASKAFALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGL 273

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           G D+++  +L+D Y+K   +   +++    +   +  +WN+ ISG            LFK
Sbjct: 274 GSDIVVETALVDCYAKCGYMGVIDMVVEKGSRRTE--TWNAAISGYTQRDQGKKALALFK 331

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            ML    +   +T+ +++P+      L    +IHC  L  G   +T     L+ +Y   G
Sbjct: 332 RMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAG 391

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL  A+ L Q +    D   W  VI     +GH Q A+  +  M  +    P++VT+ ++
Sbjct: 392 DLGVAWELFQCLP-EKDVVAWTTVIAGYGMHGHAQTAMLLYSRMV-ELGVMPNTVTIASL 449

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-----LITMYGRCRDIKSASTVFESC 532
           + +C +  +  EG  L       + G+   + NA     L+ M GR   I+ A    E  
Sbjct: 450 LHSCSHAGMVDEGLRL----FNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDM 505

Query: 533 -YNCNLCTWNCMISAFSQNK----AEVRALELFRHLEFEPNEI 570
            +   +  W+ ++ A   ++     EV A  LF   E EP+ +
Sbjct: 506 PFEPTVSVWSSLLGACVLHENVEFGEVAAKHLF---ELEPDNV 545



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 218/484 (45%), Gaps = 58/484 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETC--------------NKDVVTWNAMITACVENRCVVMG 57
           +L   + + +Y ++++   Y  C              ++  V+WN +IT CV++      
Sbjct: 64  ALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDGRAERA 123

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  F  MV+ G+  D  +++ ++ A  Q   L  GR VH L++  G+    ++ N  ++M
Sbjct: 124 LEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVKNALIDM 183

Query: 118 YAKCGDLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNV 175
           Y KCG L  +   F    +  D VSW  ++   + N++  K      EM  S E Q + V
Sbjct: 184 YGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPNAV 243

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +++  ++A A L    + K  HAL I+LG      + V  +L+  Y++CG +   +    
Sbjct: 244 TMAHLLSACASLLSGKHAKCTHALCIRLGLGSD--IVVETALVDCYAKCGYMGVIDMVVE 301

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
             + +   +WNA I G+    + ++A  L   M L  SV PD AT+ ++I   A+S  L 
Sbjct: 302 KGS-RRTETWNAAISGYTQRDQGKKALALFKRM-LAESVRPDSATMASVIPAYAESADLV 359

Query: 296 EGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           +  ++H   + R  L+  D+     L+D Y+K+  L  A  LF  + P  D+V+W ++I+
Sbjct: 360 QANNIHCCLLVRGCLVSTDI--ATGLIDLYAKAGDLGVAWELFQCL-PEKDVVAWTTVIA 416

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            L+  M+ L    +  T+ ++L SC+    ++ G         L   N
Sbjct: 417 GYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEG---------LRLFN 467

Query: 402 NTIGVNALM----------HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNG 449
           +  GV+ LM           M    G +  A+  ++ +      S W+ ++ AC   +N 
Sbjct: 468 DMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENV 527

Query: 450 HFQE 453
            F E
Sbjct: 528 EFGE 531



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 17/266 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +   T+L+  Y+   Y    + +  E  ++   TWNA I+   +       L  F
Sbjct: 272 GLGSDIVVETALVDCYAKCGYM-GVIDMVVEKGSRRTETWNAAISGYTQRDQGKKALALF 330

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ E +R DS T+  ++ A  +   L Q   +HC  +  G +  + +    +++YAK 
Sbjct: 331 KRMLAESVRPDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKA 390

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL  +   F  +   D V+W T+++G   + + +  +L +  M   G   + V+++S +
Sbjct: 391 GDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLL 450

Query: 182 AASACLGELSYG-------KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            + +  G +  G         +H L         P       L+ M  + G IE A R  
Sbjct: 451 HSCSHAGMVDEGLRLFNDMHGVHGL--------MPNAEHYLCLVDMLGRAGRIEEAYRRI 502

Query: 235 WGMTCKDVVS-WNAIIDGFALNGKFE 259
             M  +  VS W++++    L+   E
Sbjct: 503 EDMPFEPTVSVWSSLLGACVLHENVE 528



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG L     +T L+  Y+       +  LF     KDVV W  +I     +      +  
Sbjct: 371 RGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGMHGHAQTAMLL 430

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +  MVE G+  ++ T+  ++ + +    + +G R+ + +    G++ ++      V+M  
Sbjct: 431 YSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHGLMPNAEHYLCLVDMLG 490

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
           + G +  +      M    TVS W++++  C LH N
Sbjct: 491 RAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHEN 526


>gi|302761576|ref|XP_002964210.1| hypothetical protein SELMODRAFT_411 [Selaginella moellendorffii]
 gi|300167939|gb|EFJ34543.1| hypothetical protein SELMODRAFT_411 [Selaginella moellendorffii]
          Length = 727

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 198/733 (27%), Positives = 360/733 (49%), Gaps = 69/733 (9%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           GR+VH  + + G+   +SL N  +NMYA+CG L  +   F+ +   D +SWNTI+   +H
Sbjct: 1   GRMVHSHARELGLGGLASLMNAVMNMYARCGSLEEAVQVFAEIR-KDLISWNTIIGAYVH 59

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           + + E+ +  F++M   G   D ++L + +   +        K+IHA  ++LG E    V
Sbjct: 60  HAHYEEAINLFQQMQLQGFPPDKITLLAMLKVCSNSKFFLKSKLIHACVVELGDE----V 115

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKD-VVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            +  +++ MY +CG++EA+   F     +    +WN+ +   +  G+  EA  +L+   L
Sbjct: 116 ELAAAIMGMYGKCGNLEASATVFSSSAFQQSPATWNSRLAALSQEGQSTEAL-VLYSCML 174

Query: 271 MRSVEPDIATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           ++ V PD  T + L+ + A  ++  + EG  +HG+ I+R    D  +  +L+D YSK   
Sbjct: 175 LQGVMPDRVTFLALLDVAATLEARPVVEG--LHGHIIQRGYARDTFVATALLDTYSKCGR 232

Query: 329 LSKAELLFNAIAPMN-DLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAIL 375
           L +A  +F  ++  + ++V W +M+S     G F E L                T+ A+L
Sbjct: 233 LEEARCVFETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVL 292

Query: 376 PSCNSPE--SLEFGKSIHCWQ--LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
            +C+  E  + E    +  ++  ++LG     +  NA + ++   G+L  A  +  R+  
Sbjct: 293 TACSKVELEADELKSVMRVYRCCVELGHDRELVVGNAALSVHAKLGNLREAREIFSRMWT 352

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFEG 490
            +  S WN ++ AC Q G  +E    F+ M  + ++ PD+ T + ++  C  + E    G
Sbjct: 353 RNVVS-WNSILSACAQVGESRECRCLFRHMLLESDSRPDNYTFITILGVCKQSREDLTHG 411

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           + LH LA +S   LD  V  AL+ MY  C  ++ A+T F +    ++ +WN MISA S  
Sbjct: 412 RLLHQLARESSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPDVVSWNAMISALSHY 471

Query: 551 KAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               R  +LF+ ++     P+ ++ V++L+ACT    L  G+++       GF   + ++
Sbjct: 472 GEFQRVFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFSEAVRAGF--GAEVA 529

Query: 608 SALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           +A ++++  C                 KS  AW+ + +A  +  +  E I +   M  SG
Sbjct: 530 AAGINLFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSG 589

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           I P   + +S+LS  SH+G V+      ++M  ++ + P   H+ C++D+LGR+G L EA
Sbjct: 590 IDPDLVTFVSVLSTLSHAGFVEACCYQLSSMSTDHGLTPSATHYCCVIDVLGRAGLLDEA 649

Query: 711 YEFI----KNLPIQ-------------PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            E +    +N   +             P   +W + L+AC  HGD++ GK+  E +   +
Sbjct: 650 EEMVAVKLRNRRQELSSSRSSGGSGDDPLVVLWTSFLAACGIHGDSERGKRAVERILARQ 709

Query: 754 PENVGYYISLSNM 766
           PE+   Y+ LSN+
Sbjct: 710 PEDAATYVVLSNI 722



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 279/599 (46%), Gaps = 39/599 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++  Y+     E ++ +F E   KD+++WN +I A V +      ++ F +M  +G   
Sbjct: 22  AVMNMYARCGSLEEAVQVFAEI-RKDLISWNTIIGAYVHHAHYEEAINLFQQMQLQGFPP 80

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TLL ++   +      + +++H   ++ G   +  L    + MY KCG+L +S   F
Sbjct: 81  DKITLLAMLKVCSNSKFFLKSKLIHACVVELG--DEVELAAAIMGMYGKCGNLEASATVF 138

Query: 132 SGMHCADT-VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           S      +  +WN+ ++         + L+ +  M   G   D V+  + +  +A L   
Sbjct: 139 SSSAFQQSPATWNSRLAALSQEGQSTEALVLYSCMLLQGVMPDRVTFLALLDVAATLEAR 198

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAI 248
              + +H   I+ GY    +V+   +L+  YS+CG +E A   F  ++  D  VV W A+
Sbjct: 199 PVVEGLHGHIIQRGYARDTFVA--TALLDTYSKCGRLEEARCVFETLSLGDRNVVCWTAM 256

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLREGRSV-HGYAIR 306
           +  +  +G F EA      MQL +   P+  T+  +++ C+   L   E +SV   Y   
Sbjct: 257 VSAYGQHGFFGEALLYFQLMQL-QGEAPNKVTMAAVLTACSKVELEADELKSVMRVYRCC 315

Query: 307 RLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
             LG+D  L++ N+ +  ++K  +L +A  +F+ +   N +VSWNS++S           
Sbjct: 316 VELGHDRELVVGNAALSVHAKLGNLREAREIFSRMWTRN-VVSWNSILSACAQVGESREC 374

Query: 355 --LFKEMLYLC-SQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
             LF+ ML    S+    T + IL  C  S E L  G+ +H    +   S + I   AL+
Sbjct: 375 RCLFRHMLLESDSRPDNYTFITILGVCKQSREDLTHGRLLHQLARESSGSLDLIVATALV 434

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           HMY  CG L  A +    I    D   WN +I A +  G FQ     F+ M +    +PD
Sbjct: 435 HMYSECGSLEDAATTFGTI-QQPDVVSWNAMISALSHYGEFQRVFDLFQRM-KDSKVAPD 492

Query: 471 SVTLVNVISAC-GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           S+T V V++AC  N EL   G+ +   A+++  G    V  A I ++G+C  +++A   F
Sbjct: 493 SLTFVAVLNACTANSELEL-GQRVFSEAVRA--GFGAEVAAAGINLFGKCGKLEAAVETF 549

Query: 530 ESC--YNCNLCTWNCMISAFSQNKAE---VRALELFRHLEFEPNEISIVSILSACTQLG 583
            +   +  +L  WN + +A +        +R LE  R    +P+ ++ VS+LS  +  G
Sbjct: 550 LTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSGIDPDLVTFVSVLSTLSHAG 608



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 220/491 (44%), Gaps = 27/491 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETC-NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           + +++  Y      E+S  +F  +   +   TWN+ + A  +       L  +  M+ +G
Sbjct: 118 AAAIMGMYGKCGNLEASATVFSSSAFQQSPATWNSRLAALSQEGQSTEALVLYSCMLLQG 177

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D  T L ++     +        +H   I+ G   D+ +    ++ Y+KCG L  + 
Sbjct: 178 VMPDRVTFLALLDVAATLEARPVVEGLHGHIIQRGYARDTFVATALLDTYSKCGRLEEAR 237

Query: 129 CTFSGMHCAD--TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           C F  +   D   V W  ++S    + +  + LLYF+ M   GE  + V++++ + A + 
Sbjct: 238 CVFETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACSK 297

Query: 187 L----GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           +     EL     ++   ++LG++    + V N+ +S++++ G++  A   F  M  ++V
Sbjct: 298 VELEADELKSVMRVYRCCVELGHDRE--LVVGNAALSVHAKLGNLREAREIFSRMWTRNV 355

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVH 301
           VSWN+I+   A  G+  E   L   M L     PD  T +T++ +C  S   L  GR +H
Sbjct: 356 VSWNSILSACAQVGESRECRCLFRHMLLESDSRPDNYTFITILGVCKQSREDLTHGRLLH 415

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
             A       DL++  +L+  YS+  SL  A   F  I    D+VSWN+MIS L     F
Sbjct: 416 QLARESSGSLDLIVATALVHMYSECGSLEDAATTFGTI-QQPDVVSWNAMISALSHYGEF 474

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           + +  L  +   S       T +A+L +C +   LE G+ +    ++ GF        A 
Sbjct: 475 QRVFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFSEAVRAGFGAEVAA--AG 532

Query: 410 MHMYINCGDLVAAF-SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++++  CG L AA  + L  + H      WN +  A        E I+  + M +     
Sbjct: 533 INLFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECM-RLSGID 591

Query: 469 PDSVTLVNVIS 479
           PD VT V+V+S
Sbjct: 592 PDLVTFVSVLS 602



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 19/289 (6%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACV------ENRCVVMGLHF 60
           L    + L+ ++ +     +  +F     ++VV+WN++++AC       E RC+     F
Sbjct: 324 LVVGNAALSVHAKLGNLREAREIFSRMWTRNVVSWNSILSACAQVGESRECRCL-----F 378

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
              ++E   R D+ T + I+    Q    L  GR++H L+ ++    D  +    V+MY+
Sbjct: 379 RHMLLESDSRPDNYTFITILGVCKQSREDLTHGRLLHQLARESSGSLDLIVATALVHMYS 438

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CG L  +  TF  +   D VSWN ++S   H    ++    F+ M  S    D+++  +
Sbjct: 439 ECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEFQRVFDLFQRMKDSKVAPDSLTFVA 498

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A     EL  G+ + +  ++ G+       V  + I+++ +CG +EAA   F  +  
Sbjct: 499 VLNACTANSELELGQRVFSEAVRAGFG----AEVAAAGINLFGKCGKLEAAVETFLTLVP 554

Query: 240 --KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
             K +++WN +    A   +  E   +L  M+L   ++PD+ T V+++S
Sbjct: 555 HEKSLLAWNGLATALAHGARPSEVIRVLECMRL-SGIDPDLVTFVSVLS 602


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 202/702 (28%), Positives = 320/702 (45%), Gaps = 109/702 (15%)

Query: 173  DNVSLSSAVAASACLGELSYGKVIHALG----IKLGYEDSPYVSVTNSLISMYSQCGDIE 228
            D+ S +S  A SA +    +      LG    IKL  + +P  +  N LIS Y   GD  
Sbjct: 566  DSPSRASTGAISAGVDVFRFNTTCGMLGALVMIKLPQKWNPDAAAKN-LISSYLGFGDFW 624

Query: 229  AAERAFWGMTCKDVVSWNAIIDGFALN-GKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
            +A   F+    ++ + WN+ ++ F  + G      ++  E+   + V  D       +  
Sbjct: 625  SAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELH-GKGVVFDSEVYSVALKT 683

Query: 288  CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            C   + +  G  +HG  I+R    D+ +  +LM+FY +   L KA  +F+ + P  + + 
Sbjct: 684  CTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEM-PNPEALL 742

Query: 348  WNSMI------------SGLFKEMLYLCSQFSF-----STLLAILPSCNSPESLEFGKSI 390
            WN  I              LF++M     QFSF     +T++ +L +C    +L   K I
Sbjct: 743  WNEAIILNLQSEKLQKGVELFRKM-----QFSFLKAETATIVRVLQACGKMGALNAAKQI 797

Query: 391  HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN----------- 439
            H +  + G  ++    N L+ MY   G L  A  +   +  N +TS WN           
Sbjct: 798  HGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM-ENRNTSSWNSMISSYAALGF 856

Query: 440  -------------------IVIVACTQNGHF-----QEAIKTFKSMTQQQNASPDSVTLV 475
                               IV   C  +GHF     +E +   + M Q +   P+S ++ 
Sbjct: 857  LNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM-QGEGFKPNSSSMT 915

Query: 476  NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
            +V+ A   L     GK  HG  L++    D  V  +LI MY +   + SA  VF++  N 
Sbjct: 916  SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNR 975

Query: 536  NLCTWNCMISAFSQNKAEVRALELFRHLE---------------------------FEPN 568
            N+  WN ++S +S       AL L   +E                           F PN
Sbjct: 976  NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPN 1035

Query: 569  EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
              SI  +L AC  L +L+ GK+IH      GF E+ F+++AL+DMYS             
Sbjct: 1036 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 1095

Query: 618  ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
                K+ A+W+ MI  +   G G EAI +F+EM   G+ P   +  +LLSAC +SGL+ E
Sbjct: 1096 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 1155

Query: 674  GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            G +Y+++M+ +Y + P  EH+ C+VD+LGR+G L EA++ I  +P++P   +WGA+L +C
Sbjct: 1156 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 1215

Query: 734  SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
              H +    +  A+ LFKLEP N   YI + N+Y    RW+D
Sbjct: 1216 RIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWED 1257



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 143/559 (25%), Positives = 244/559 (43%), Gaps = 88/559 (15%)

Query: 9    TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF----FGEM 64
             + +L+++Y     F S+  +FY    ++ + WN+ +    E +     LH     F E+
Sbjct: 609  AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVE---EFKSSAGSLHIVLEVFKEL 665

Query: 65   VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
              +G+ FDS    + +   T++  +  G  +H   IK G   D  L    +N Y +C  L
Sbjct: 666  HGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGL 725

Query: 125  NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
              +   F  M   + + WN  +   L +   +K +  FR+M +S  +A+  ++   + A 
Sbjct: 726  EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQAC 785

Query: 185  ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK---- 240
              +G L+  K IH    + G +    VS+ N LISMYS+ G +E A R F  M  +    
Sbjct: 786  GKMGALNAAKQIHGYVFRFGLDSD--VSLCNPLISMYSKNGKLELARRVFDSMENRNTSS 843

Query: 241  -------------------------------DVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
                                           D+V+WN ++ G  L+G  EE  ++L  MQ
Sbjct: 844  WNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQ 903

Query: 270  LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
                 +P+ +++ +++   ++   L  G+  HGY +R     D+ +  SL+D Y K++SL
Sbjct: 904  -GEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSL 962

Query: 330  SKAELLFNAIAPMN----------------------------------DLVSWNSMISGL 355
              A+ +F+ +   N                                  DLV+WN MISG 
Sbjct: 963  XSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGY 1022

Query: 356  FKEMLYLCSQFSF----STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
                ++ C++ +F    +++  +L +C S   L+ GK IHC  ++ GF  +     AL+ 
Sbjct: 1023 ---AMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 1079

Query: 412  MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
            MY     L  A  + +RI  N   + WN +I+     G  +EAI  F  M Q+    PD+
Sbjct: 1080 MYSKSSSLKNAHKVFRRI-QNKTLASWNCMIMGFAIFGLGKEAISVFNEM-QKVGVGPDA 1137

Query: 472  VTLVNVISACGNLELAFEG 490
            +T   ++SAC N  L  EG
Sbjct: 1138 ITFTALLSACKNSGLIGEG 1156



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 246/575 (42%), Gaps = 87/575 (15%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            RGF   +    +L+  Y      E +  +F+E  N + + WN  I   +++  +  G+  
Sbjct: 703  RGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVEL 762

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            F +M    ++ ++ T++ ++ A  +M  L   + +H    + G+ +D SLCN  ++MY+K
Sbjct: 763  FRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK 822

Query: 121  CGDLNSSECTFSGMH-----------------------------------CADTVSWNTI 145
             G L  +   F  M                                      D V+WN +
Sbjct: 823  NGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCL 882

Query: 146  MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
            +SG   + Y E+ L   + M   G + ++ S++S + A + LG L+ GK  H   ++ G+
Sbjct: 883  LSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGF 942

Query: 206  EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            +   YV    SLI MY +   + +A+  F  M  +++ +WN+++ G++  G FE+A  LL
Sbjct: 943  DCDVYVGT--SLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 1000

Query: 266  HEMQLMRSVEPDI------------------------ATVVTLISLCADSLLLREGRSVH 301
            ++M+    ++PD+                        A++  L+  CA   LL++G+ +H
Sbjct: 1001 NQME-KEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIH 1059

Query: 302  GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              +IR     D+ +  +L+D YSKS+SL  A  +F  I     L SWN MI G       
Sbjct: 1060 CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ-NKTLASWNCMIMGFAIFGLG 1118

Query: 355  -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 +F EM  +       T  A+L +C +   +  G     W+       +   V  L
Sbjct: 1119 KEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG-----WKYFDSMITDYRIVPRL 1173

Query: 410  MH------MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             H      +    G L  A+ L+  +    D + W  ++ +C  + +   A    K++ +
Sbjct: 1174 EHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFK 1233

Query: 464  -QQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
             + N S + + ++N+ S     E     + L G A
Sbjct: 1234 LEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAA 1268


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 252/482 (52%), Gaps = 42/482 (8%)

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL--LAILP----------SCNSPE 382
           +F        + SWNS+I+   +    L + ++FS++  L++ P          SC+S  
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            L  GK IH      G+ ++    +AL+ MY  CG L  A  L   I   +  S W  +I
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVS-WTSMI 159

Query: 443 VACTQNGHFQEAIKTFKSM----------TQQQNASPDSVTLVNVISACGNLELAFEGKS 492
               QN   +EA+  FK                    DSV L  VISAC  + +    + 
Sbjct: 160 SGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTEC 219

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HGLA+K        V N L+  Y +C +I  +  VF+     ++C+WN +I+ ++QN  
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279

Query: 553 EVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
            V A  LF  +    E   N +++ ++L AC   G L+ GK IH  V  +  ++N  + +
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +++DMY  C               K+  +W+ M++ YG HG G EA+++F+EM   GI+P
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + +S+L+ACSH+GL+ EG  ++N M  E+DV P  EH+ C+VD+LGR+G L+EAY  
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGL 459

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I+ + ++P   VWG++L AC  H + ++G+  A  LFKL+P N GYY+ LSN+Y   GRW
Sbjct: 460 IQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRW 519

Query: 774 KD 775
            D
Sbjct: 520 DD 521



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 184/366 (50%), Gaps = 20/366 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ + +  +++L+  YS   Y   +  LF E   ++VV+W +MI+  V+N      +  F
Sbjct: 116 GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLF 175

Query: 62  GE--MVEE---------GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
            E  +V+E         G+  DS  L  ++SA  ++        VH L++K G     ++
Sbjct: 176 KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAV 235

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE 170
            N  ++ YAKCG+++ S   F GM   D  SWN++++    N    +    F +M   GE
Sbjct: 236 GNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGE 295

Query: 171 QADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
              N V+LS+ + A A  G L  GK IH   +K+  ED+  + V  S++ MY +CG +E 
Sbjct: 296 VRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN--LVVGTSIVDMYCKCGRVEM 353

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A +AF  +  K+V SW  ++ G+ ++G  +EA  + +EM +   ++P+  T V++++ C+
Sbjct: 354 ARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM-IRCGIKPNYITFVSVLAACS 412

Query: 290 DSLLLREGRSVHGYAIRRL---LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            + LL+EG   H +   +    +   +   + ++D   ++  L +A  L   +    D +
Sbjct: 413 HAGLLKEGW--HWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFI 470

Query: 347 SWNSMI 352
            W S++
Sbjct: 471 VWGSLL 476



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 204/436 (46%), Gaps = 35/436 (8%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V +WN++I     +   +  L+ F  M +  +  + +T    + + + +  L  G+ +H 
Sbjct: 51  VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
            +   G  +D  + +  ++MY+KCG LN +   F  +   + VSW +++SG + N    +
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170

Query: 158 CLLYFREMGWSGEQ-----------ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            +  F+E     E             D+V L   ++A A +   S  + +H L +K G+E
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
               ++V N+L+  Y++CG+I  + + F GM   DV SWN++I  +A NG   EAF L  
Sbjct: 231 GC--LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +M     V  +  T+  ++  CA S  L+ G+ +H   ++  L  +L++  S++D Y K 
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
             +  A   F+ +   N + SW  M++G            +F EM+    + ++ T +++
Sbjct: 349 GRVEMARKAFDRLKRKN-VKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSV 407

Query: 375 LPSCNSPESLEFG----KSIHC-WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           L +C+    L+ G      + C + ++ G  + +  V+ L       G L  A+ L+Q +
Sbjct: 408 LAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLG----RAGYLKEAYGLIQEM 463

Query: 430 SHNSDTSCWNIVIVAC 445
               D   W  ++ AC
Sbjct: 464 KVKPDFIVWGSLLGAC 479



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF   L    +L+ AY+       S  +F      DV +WN++I    +N   V     
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286

Query: 61  FGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +MV+ G +R+++ TL  ++ A      L+ G+ +H   +K  +  +  +    V+MY 
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYC 346

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG +  +   F  +   +  SW  +++G   + + ++ +  F EM   G + + ++  S
Sbjct: 347 KCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVS 406

Query: 180 AVAASACLGELSYGKVIHALG-IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +AA +  G L  G   H    +K  ++  P +   + ++ +  + G ++ A      M 
Sbjct: 407 VLAACSHAGLLKEG--WHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK 464

Query: 239 CK-DVVSWNAII 249
            K D + W +++
Sbjct: 465 VKPDFIVWGSLL 476


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/584 (30%), Positives = 303/584 (51%), Gaps = 52/584 (8%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D+VSW+A+I  +A N K  EA     +M L     P+      +   C++   +  G+ 
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDM-LECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 300 VHGYAIRRLLGY---DLLMMNSLMDFYSKSN-SLSKAELLFNAIAPMNDLVSWNSMIS-- 353
           + G+ ++   GY   D+ +  +L+D + K N  L  A  +F+ + P  ++V+W  MI+  
Sbjct: 64  IFGFLLK--TGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRM-PDRNVVTWTLMITRF 120

Query: 354 ----------GLFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                      LF +M+   Y+  +F   TL  ++ +C     L  G+  HC  +K G  
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRF---TLSGVVSACAEMGLLSLGRQFHCLVMKSGLD 177

Query: 401 NNTIGVNALMHMYINC---GDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGH-FQEAI 455
            +     +L+ MY  C   G +  A  +  R+  HN     W  +I    Q+G   +EAI
Sbjct: 178 LDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHN--VMSWTAIITGYVQSGGCDREAI 235

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + F  M Q Q   P+  T  +V+ AC NL   + G+ ++ L +K  +     V N+LI+M
Sbjct: 236 ELFLEMVQGQ-VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISM 294

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISI 572
           Y RC ++++A   F+  +  NL ++N +++A++++     A ELF  +E      N  + 
Sbjct: 295 YSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTF 354

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA---------- 622
            S+LS  + +G +  G+QIH  +   GF+ N  I +AL+ MYS C +  A          
Sbjct: 355 ASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGD 414

Query: 623 -----WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
                W+SMI+ +  HG    A+E FH+M  +G+ P + + I++LSACSH GL+ EGL++
Sbjct: 415 GNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKH 474

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + +M  E+ + P  EH+ C+VD+LGRSG L+EA E + ++P +    V    L AC  HG
Sbjct: 475 FKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           +  +GK  AE++ + +P +   YI LSN++ + G+W++  EI K
Sbjct: 535 NMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRK 578



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 145/575 (25%), Positives = 264/575 (45%), Gaps = 56/575 (9%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +D+V+W+A+I+    N      +  F +M+E G   +      +  A +    +  G++
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 95  VHCLSIKAGMIADSSLCN--VFVNMYAKC-GDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           +    +K G   +S +C     ++M+ K  GDL S+   F  M   + V+W  +++    
Sbjct: 64  IFGFLLKTGYF-ESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
             +    +  F +M  SG   D  +LS  V+A A +G LS G+  H L +K G +    V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD--V 180

Query: 212 SVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE-EAFDLLHE 267
            V  SL+ MY++C   G ++ A + F  M   +V+SW AII G+  +G  + EA +L  E
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   V+P+  T  +++  CA+   +  G  V+   ++  L     + NSL+  YS+  
Sbjct: 241 M-VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCG 299

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           ++  A   F+ +   N LVS+N++++             LF E+    +  +  T  ++L
Sbjct: 300 NMENARKAFDVLFEKN-LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLL 358

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
              +S  ++  G+ IH   LK GF +N    NAL+ MY  CG++ AAF +   +  + + 
Sbjct: 359 SGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNV 417

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W  +I    ++G    A++TF  M  +   SP+ VT + V+SAC ++ L  EG   H 
Sbjct: 418 ISWTSMITGFAKHGFATRALETFHKML-EAGVSPNEVTYIAVLSACSHVGLISEGLK-HF 475

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            ++K   G+  R+++                             + C++    ++     
Sbjct: 476 KSMKVEHGIVPRMEH-----------------------------YACVVDLLGRSGHLEE 506

Query: 556 ALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           A+EL   + F+ + + + + L AC   G +  GK 
Sbjct: 507 AMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 232/473 (49%), Gaps = 36/473 (7%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            ES+  +F    +++VVTW  MIT   +       +  F +MV  G   D  TL  +VSA
Sbjct: 95  LESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSA 154

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADT 139
             +M  L  GR  HCL +K+G+  D  +    V+MYAKC   G ++ +   F  M   + 
Sbjct: 155 CAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNV 214

Query: 140 VSWNTIMSGCLHNNYPEK-CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +SW  I++G + +   ++  +  F EM     + ++ + SS + A A L ++  G+ ++A
Sbjct: 215 MSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYA 274

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
           L +K+    +    V NSLISMYS+CG++E A +AF  +  K++VS+N I++ +A +   
Sbjct: 275 LVVKMRL--ASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           EEAF+L +E++       +  T  +L+S  +    + +G  +H   ++     +L + N+
Sbjct: 333 EEAFELFNEIE-GAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNA 391

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSC 378
           L+  YS+  ++  A  +FN +   N ++SW SMI+G  K      +  +  T   +L + 
Sbjct: 392 LISMYSRCGNIEAAFQVFNEMGDGN-VISWTSMITGFAKHGF---ATRALETFHKMLEAG 447

Query: 379 NSPESLEFGKSIH-CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
            SP  + +   +  C  + L     + G+     M +  G       ++ R+ H      
Sbjct: 448 VSPNEVTYIAVLSACSHVGL----ISEGLKHFKSMKVEHG-------IVPRMEH------ 490

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELA 487
           +  V+    ++GH +EA++   SM  +     D++ L   + AC   GN++L 
Sbjct: 491 YACVVDLLGRSGHLEEAMELVNSMPFK----ADALVLRTFLGACRVHGNMDLG 539



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 110/219 (50%), Gaps = 1/219 (0%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL++ YS     E++   F     K++V++N ++ A  ++         F E+   G   
Sbjct: 290 SLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGV 349

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           ++ T   ++S  + +  + +G  +H   +K+G  ++  +CN  ++MY++CG++ ++   F
Sbjct: 350 NAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVF 409

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           + M   + +SW ++++G   + +  + L  F +M  +G   + V+  + ++A + +G +S
Sbjct: 410 NEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLIS 469

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
            G + H   +K+ +   P +     ++ +  + G +E A
Sbjct: 470 EG-LKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEA 507



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++L    +L++ YS     E++  +F E  + +V++W +MIT   ++      L  F
Sbjct: 381 GFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETF 440

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +M+E G+  +  T + ++SA + +  + +G +    + ++ G++         V++  +
Sbjct: 441 HKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGR 500

Query: 121 CGDLNSS-ECTFSGMHCADTVSWNTIMSGC-LHNN 153
            G L  + E   S    AD +   T +  C +H N
Sbjct: 501 SGHLEEAMELVNSMPFKADALVLRTFLGACRVHGN 535



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
           N +   +WS++IS Y  + K +EAI  F +M   G  P +     +  ACS+   +  G 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGR-SGKLQEAYEFIKNLP 718
             +  +L+      +      ++DM  + +G L+ AY+    +P
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/587 (31%), Positives = 293/587 (49%), Gaps = 43/587 (7%)

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           R F  M  +D VSWN +I G+   GK E ++ L  +M+       D  +   L+   A +
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRC-GCYVDGYSFSRLLKGIASA 60

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
                G  VHG  ++     ++ + +SL+D Y+K   +  A   F  I   N  VSWN++
Sbjct: 61  KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNS-VSWNAL 119

Query: 352 ISGLF-----KEMLYLCSQF-----------SFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           I+G       K   +L               +F+ LL +L   + P      K +H   L
Sbjct: 120 IAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLL---DDPMFCNLLKQVHAKVL 176

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           KLG  +     NA++  Y NCG +  A  +   +  + D   WN +I   +++   + A 
Sbjct: 177 KLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAF 236

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + F  M  +     D  T   ++SAC   E    GKSLHGL +K  +   T V NALI+M
Sbjct: 237 ELFTEM-HRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISM 295

Query: 516 YGRCRD--IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
           Y +     +K A ++FES    +L +WN +++ FSQN     A++ FR+L     E ++ 
Sbjct: 296 YIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDY 355

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           +  ++L +C+ L  L+ G+Q H       F+ N F++S+L+ MYS C             
Sbjct: 356 AFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQI 415

Query: 618 --KSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
             K N  AW++MI  Y  HG G  +++LF +MCN  ++    +  ++L+ACSH+GL+ EG
Sbjct: 416 SSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 475

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           L+  N+M   Y ++P  EH+   VD+LGR+G + +  E I+++P+ P P V    L  C 
Sbjct: 476 LELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCR 535

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             G+ +M  QVA  L ++EPE+   Y+SLS+MY  L +W++   + K
Sbjct: 536 ACGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKK 582



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 170/616 (27%), Positives = 282/616 (45%), Gaps = 47/616 (7%)

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D+VSWNT++SG       E     F +M   G   D  S S  +   A     
Sbjct: 4   FDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRF 63

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ +H L +K GYE + YV   +SL+ MY++C  +E A  AF  +   + VSWNA+I 
Sbjct: 64  DLGEQVHGLVVKGGYECNVYVG--SSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF      + AF LL  M++  +V  D  T   L++L  D +     + VH   ++  L 
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
           +++ + N+++  Y+    +S A+ +F+ +    DL+SWNSMI+G            LF E
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN--C 416
           M     +    T   I+ +C+  E   FGKS+H   +K G    T   NAL+ MYI    
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A SL + +    D   WN ++   +QNG  ++A+K F+ + +  N   D      
Sbjct: 302 GVMKDALSLFESLKPK-DLVSWNSIMTGFSQNGLSEDAVKFFRYL-RSSNIEVDDYAFSA 359

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC- 535
           V+ +C +L     G+  H LA KS    +  V ++LI MY +C  I++A   FE   +  
Sbjct: 360 VLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKH 419

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           N   WN MI  ++Q+ +   +L+LF  +     + + ++  +IL+AC+  G+++ G ++ 
Sbjct: 420 NTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL- 478

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
                L   E  +     ++ Y      AA   ++   G   K  E IE      +  + 
Sbjct: 479 -----LNSMEPVYKIQPRMEHY------AAAVDLLGRAGLVNKVKELIE------SMPLN 521

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQE-- 709
           P    + + L  C   G ++   Q  N++LE   + PE    +V +  M     K +E  
Sbjct: 522 PDPMVLKTFLGVCRACGEIEMATQVANHLLE---IEPEDHFAYVSLSHMYSDLKKWEEKA 578

Query: 710 -AYEFIKNLPIQPKPG 724
              + +K   ++  PG
Sbjct: 579 NVKKMMKERGVKKVPG 594



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 288/646 (44%), Gaps = 68/646 (10%)

Query: 27  LALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM 86
           + LF E   +D V+WN MI+       +      F +M   G   D  +   ++  +   
Sbjct: 1   MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
                G  VH L +K G   +  + +  V+MYAKC  +  +   F  +   ++VSWN ++
Sbjct: 61  KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120

Query: 147 SGCLHNNYPEKC--LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           +G +     +    LL   EM  +    D+ + +  +         +  K +HA  +KLG
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMK-AAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG 179

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDVVSWNAIIDGFALNGKFEEAFD 263
            E    +++ N++IS Y+ CG +  A+R F G+   KD++SWN++I G + + + E AF+
Sbjct: 180 LEHE--ITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFE 237

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L  EM     +E DI T   ++S C+       G+S+HG  I++ L     + N+L+  Y
Sbjct: 238 LFTEMH-RNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMY 296

Query: 324 SK--SNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML---------YLCS------QF 366
            +  +  +  A  LF ++ P  DLVSWNS+++G  +  L         YL S       +
Sbjct: 297 IQFPTGVMKDALSLFESLKP-KDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDY 355

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +FS   A+L SC+   +L+ G+  H    K  F +N    ++L+ MY  CG +  A    
Sbjct: 356 AFS---AVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCF 412

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           ++IS   +T  WN +I+   Q+G  Q ++  F  M   QN   D VT   +++AC +  L
Sbjct: 413 EQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMC-NQNVKLDHVTFTAILTACSHTGL 471

Query: 487 AFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
             EG  L   +++ +  +  R+++  A + + GR   +                      
Sbjct: 472 IQEGLELLN-SMEPVYKIQPRMEHYAAAVDLLGRAGLV---------------------- 508

Query: 545 SAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                NK +    EL   +   P+ + + + L  C   G +    Q+  H+  +   E+ 
Sbjct: 509 -----NKVK----ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIE-PEDH 558

Query: 605 FISSALLDMYSNCKS---NAAWSSMISAYGYHG-KGWEAIELFHEM 646
           F   +L  MYS+ K     A    M+   G     GW  IE+ +++
Sbjct: 559 FAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIEIRNQV 604



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 222/510 (43%), Gaps = 67/510 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++   +SL+  Y+     E +   F E    + V+WNA+I   V+ R         
Sbjct: 77  GYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAFWLL 136

Query: 62  GEM-VEEGIRFDSTTLLIIVSALTQM---NCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           G M ++  +  D  T   +++ L      N LKQ   VH   +K G+  + ++CN  ++ 
Sbjct: 137 GLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQ---VHAKVLKLGLEHEITICNAMISS 193

Query: 118 YAKCGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           YA CG ++ ++  F G+    D +SWN++++G   +   E     F EM  +  + D  +
Sbjct: 194 YANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYT 253

Query: 177 LSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ--CGDIEAAER 232
            +  V  SAC GE   S+GK +H L IK G E     SV+N+LISMY Q   G ++ A  
Sbjct: 254 YTGIV--SACSGEEHQSFGKSLHGLVIKKGLEQ--VTSVSNALISMYIQFPTGVMKDALS 309

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  +  KD+VSWN+I+ GF+ NG  E+A      ++   ++E D      ++  C+D  
Sbjct: 310 LFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLR-SSNIEVDDYAFSAVLRSCSDLA 368

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L+ G+  H  A +     +  + +SL+  YSK   +  A   F  I+  ++ ++WN+MI
Sbjct: 369 TLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMI 428

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
            G            LF +M     +    T  AIL +C+    ++ G  +      L   
Sbjct: 429 LGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL------LNSM 482

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
                +   M  Y    DL+    L+ ++                             K 
Sbjct: 483 EPVYKIQPRMEHYAAAVDLLGRAGLVNKV-----------------------------KE 513

Query: 461 MTQQQNASPDSV---TLVNVISACGNLELA 487
           + +    +PD +   T + V  ACG +E+A
Sbjct: 514 LIESMPLNPDPMVLKTFLGVCRACGEIEMA 543


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 182/619 (29%), Positives = 308/619 (49%), Gaps = 39/619 (6%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H   +K G     +    N L++ Y   G +E A + F  M   + VS+  +  GF
Sbjct: 22  GKSLHCHILKHGASLDLFAQ--NILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           + + +F+ A   L         E +     TL+ L     L     SVH Y  +     D
Sbjct: 80  SRSHQFQRAR-RLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQAD 138

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
             +  +L+D YS   ++  A  +F+ I    D+VSW  M++             LF +M 
Sbjct: 139 AFVGTALIDAYSVCGNVDAARQVFDGIY-FKDMVSWTGMVACYAENYCHEDSLLLFCQMR 197

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
            +  + +  T+ A L SCN  E+ + GKS+H   LK+ +  +     AL+ +Y   G++ 
Sbjct: 198 IMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIA 257

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A    + +  + D   W+++I    Q+   +EA++ F  M Q     P++ T  +V+ A
Sbjct: 258 EAQQFFEEMPKD-DLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQA 316

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLC 538
           C +L L   G  +H   LK  +GLD+ V   NAL+ +Y +C +I+++  +F      N  
Sbjct: 317 CASLVLLNLGNQIHSCVLK--VGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEV 374

Query: 539 TWNCMISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
            WN +I  + Q     +AL LF +   L+ +P E++  S+L A   L  L  G+QIH   
Sbjct: 375 AWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLT 434

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
               + ++S ++++L+DMY+ C               +   +W+++I  Y  HG G EA+
Sbjct: 435 IKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEAL 494

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
            LF  M  S  +P K + + +LSACS++GL+D+G  ++ +ML++Y + P  EH+ C+V +
Sbjct: 495 NLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWL 554

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGRSG+  EA + I  +P QP   VW A+L AC  H +  +GK  A+ + ++EP++   +
Sbjct: 555 LGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATH 614

Query: 761 ISLSNMYVALGRWKDAVEI 779
           + LSNMY    RW +   +
Sbjct: 615 VLLSNMYATAKRWDNVAYV 633



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 296/635 (46%), Gaps = 50/635 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+ +HC  +K G   D    N+ +N Y   G L  +   F  M   +TVS+ T+  G   
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           ++  ++       +   G + +    ++ +     +        +HA   KLG++   +V
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               +LI  YS CG+++AA + F G+  KD+VSW  ++  +A N   E++  L  +M++M
Sbjct: 142 G--TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
               P+  T+   +  C      + G+SVHG A++     DL +  +L++ Y+KS  +++
Sbjct: 200 -GYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAE 258

Query: 332 AELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQFSFS--------TLLAILPSC 378
           A+  F  + P +DL+ W+ MIS        KE L L  +   S        T  ++L +C
Sbjct: 259 AQQFFEEM-PKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQAC 317

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            S   L  G  IH   LK+G  +N    NALM +Y  CG++  +  L    +  ++ + W
Sbjct: 318 ASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVA-W 376

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +IV   Q G  ++A+  F +M    +  P  VT  +V+ A  +L     G+ +H L +
Sbjct: 377 NTIIVGYVQLGDGEKALNLFSNML-GLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTI 435

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K++   D+ V N+LI MY +C  I  A   F+     +  +WN +I  +S +   + AL 
Sbjct: 436 KTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALN 495

Query: 559 LFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  ++    +PN+++ V +LSAC+  G+L  G+    H              ++L  Y 
Sbjct: 496 LFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGR---AHF------------KSMLQDYG 540

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVD 672
                  ++ M+   G  G+  EA++L  E+      P + SV+   +LL AC     +D
Sbjct: 541 IEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI------PFQPSVMVWRALLGACVIHKNLD 594

Query: 673 EGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGK 706
            G      +LE   + P+ +  HV + +M   + +
Sbjct: 595 LGKVCAQRVLE---MEPQDDATHVLLSNMYATAKR 626



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 157/619 (25%), Positives = 280/619 (45%), Gaps = 50/619 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y +  + E +  LF E    + V++  +      +            +  EG   +
Sbjct: 44  LLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVN 103

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                 ++  L  M+       VH    K G  AD+ +    ++ Y+ CG+++++   F 
Sbjct: 104 QFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFD 163

Query: 133 GMHCADTVSWNTIMSGCLHNNY-PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           G++  D VSW T M  C   NY  E  LL F +M   G + +N ++S+A+ +   L    
Sbjct: 164 GIYFKDMVSW-TGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFK 222

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +H   +K+ Y+   YV +  +L+ +Y++ G+I  A++ F  M   D++ W+ +I  
Sbjct: 223 VGKSVHGCALKVCYDRDLYVGI--ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISR 280

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A + K +EA +L   M+    V P+  T  +++  CA  +LL  G  +H   ++  L  
Sbjct: 281 YAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDS 340

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ + N+LMD Y+K   +  +  LF      N+ V+WN++I G            LF  M
Sbjct: 341 NVFVSNALMDVYAKCGEIENSVKLFTGSTEKNE-VAWNTIIVGYVQLGDGEKALNLFSNM 399

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L L  Q +  T  ++L +  S  +LE G+ IH   +K  ++ +++  N+L+ MY  CG +
Sbjct: 400 LGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRI 459

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A     ++    + S WN +I   + +G   EA+  F  M QQ N+ P+ +T V V+S
Sbjct: 460 DDARLTFDKMDKQDEVS-WNALICGYSIHGLGMEALNLF-DMMQQSNSKPNKLTFVGVLS 517

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC N  L  +G++      KS++             YG            E C       
Sbjct: 518 ACSNAGLLDKGRA----HFKSML-----------QDYG-----------IEPCIE----H 547

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           + CM+    ++     A++L   + F+P+ +   ++L AC     L  GK     V  + 
Sbjct: 548 YTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEME 607

Query: 600 FQENSFISSALLDMYSNCK 618
            Q+++     L +MY+  K
Sbjct: 608 PQDDA-THVLLSNMYATAK 625



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 196/401 (48%), Gaps = 17/401 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A     T+L+ AYS     +++  +F     KD+V+W  M+    EN C    L  F
Sbjct: 134 GHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLF 193

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G R ++ T+   + +   +   K G+ VH  ++K     D  +    + +Y K 
Sbjct: 194 CQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKS 253

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSA 180
           G++  ++  F  M   D + W+ ++S    ++  ++ L  F  M  S     +N + +S 
Sbjct: 254 GEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASV 313

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L  L+ G  IH+  +K+G + + +VS  N+L+ +Y++CG+IE + + F G T K
Sbjct: 314 LQACASLVLLNLGNQIHSCVLKVGLDSNVFVS--NALMDVYAKCGEIENSVKLFTGSTEK 371

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + V+WN II G+   G  E+A +L   M L   ++P   T  +++   A  + L  GR +
Sbjct: 372 NEVAWNTIIVGYVQLGDGEKALNLFSNM-LGLDIQPTEVTYSSVLRASASLVALEPGRQI 430

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H   I+ +   D ++ NSL+D Y+K   +  A L F+ +    D VSWN++I G      
Sbjct: 431 HSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDK-QDEVSWNALICGYSIHGL 489

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
                 LF  M    S+ +  T + +L +C++   L+ G++
Sbjct: 490 GMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRA 530



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 2/249 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++  S +L+  Y+     E+S+ LF  +  K+ V WN +I   V+       L+ F
Sbjct: 337 GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLF 396

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+   I+    T   ++ A   +  L+ GR +H L+IK     DS + N  ++MYAKC
Sbjct: 397 SNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKC 456

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +  TF  M   D VSWN ++ G   +    + L  F  M  S  + + ++    +
Sbjct: 457 GRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVL 516

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
           +A +  G L  G+  H   +   Y   P +     ++ +  + G  + A +    +  + 
Sbjct: 517 SACSNAGLLDKGRA-HFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQP 575

Query: 241 DVVSWNAII 249
            V+ W A++
Sbjct: 576 SVMVWRALL 584


>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
 gi|238005588|gb|ACR33829.1| unknown [Zea mays]
 gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
          Length = 569

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 161/485 (33%), Positives = 260/485 (53%), Gaps = 41/485 (8%)

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG--------------LFKEMLYLCSQFSFSTLLA 373
           SL+ A  +F+A  P+ D   WN+++                L+K M          T   
Sbjct: 67  SLAYARRVFDA-TPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPI 125

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +LP+C +   L  G+++H   ++   + +    +AL+ MY   G+ VA   L+   SH S
Sbjct: 126 VLPACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGE-VADAELVFAESHGS 184

Query: 434 DTSC--WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             +   W  ++    QN +F EA+  F +M  +    P+ +TL++ +      E    G+
Sbjct: 185 SRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAE-GVLPNEITLISFLPCLQGQEWLDAGE 243

Query: 492 SLHGLALKSLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            +HG  ++  +G D  +   NALI MYG+C  I  A T+FE     +L +WN M++ + Q
Sbjct: 244 MVHGFVIR--LGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQ 301

Query: 550 NKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           +   V A++ FR +  E    + +++VS+LSAC + G L+ GK +H    + G   ++ I
Sbjct: 302 HADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARI 361

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            + L+DMY+ C               +S  +WS+MISAY  HG   EA++LF  M N G+
Sbjct: 362 GNVLVDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGV 421

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           RP   +  ++L AC HSGLV+EGL+++N++L +Y + P  EH+ C+VDMLGR+G+L EAY
Sbjct: 422 RPNSFTFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAY 481

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           E I+ + + P   VWGA L+ C  HG+ ++ + VA  LF+    +V +Y+ +SNMY   G
Sbjct: 482 EIIRGMSLCPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAG 541

Query: 772 RWKDA 776
             KDA
Sbjct: 542 MLKDA 546



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 229/492 (46%), Gaps = 42/492 (8%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHA  I LG   +P  +   SL++  +    +  A R F     +D   WN ++   + +
Sbjct: 40  IHARAIVLGVSANP--AFATSLLAGVAPA-SLAYARRVFDATPVRDAYMWNTLLRAHS-H 95

Query: 256 GKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            +   A D L   + MR+  V PD  T   ++  CA +  L  GR+VHG  +R  L  D 
Sbjct: 96  SQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRFALAGDG 155

Query: 314 LMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISG------------LFKEML 360
            + ++L+  Y +   ++ AEL+F  +      +VSW SM++G            LF  M+
Sbjct: 156 FVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGTMI 215

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 +  TL++ LP     E L+ G+ +H + ++LGF  N    NAL+ MY  CG + 
Sbjct: 216 AEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAMYGKCGSIP 275

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A +L + +   S  S WN ++    Q+    EAIK F+ M  ++    D VTLV+V+SA
Sbjct: 276 MAQTLFEGMPARSLAS-WNTMVAMYEQHADVVEAIKFFRRMLTEK-VGFDCVTLVSVLSA 333

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C        GK +H LA    +  D R+ N L+ MY +C +I SA  VF+     ++ +W
Sbjct: 334 CARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSW 393

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           + MISA++ + A   AL+LF  ++ E   PN  +  ++L AC   G++  G +       
Sbjct: 394 SAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLK------- 446

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
                NS +S      Y    +   ++ M+   G  G+  EA E+   M    + P K  
Sbjct: 447 ---HFNSILSD-----YQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGM---SLCPDKCV 495

Query: 658 VISLLSACSHSG 669
             + L+ C   G
Sbjct: 496 WGAFLAGCKLHG 507



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 212/471 (45%), Gaps = 24/471 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRC--VVMGLH 59
           G  A+   +TSLL   +  S    +  +F  T  +D   WN ++ A   ++       L 
Sbjct: 48  GVSANPAFATSLLAGVAPAS-LAYARRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLA 106

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +  M   G+  D  T  I++ A      L  GR VH   ++  +  D  + +  + MY 
Sbjct: 107 LYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRFALAGDGFVHSALITMYF 166

Query: 120 KCGDLNSSECTFSGMHCAD--TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           + G++  +E  F+  H +    VSW ++++G + N Y  + +  F  M   G   + ++L
Sbjct: 167 QEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITL 226

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            S +        L  G+++H   I+LG++ +  + + N+LI+MY +CG I  A+  F GM
Sbjct: 227 ISFLPCLQGQEWLDAGEMVHGFVIRLGFDAN--IPLANALIAMYGKCGSIPMAQTLFEGM 284

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             + + SWN ++  +  +    EA      M L   V  D  T+V+++S CA S  L+ G
Sbjct: 285 PARSLASWNTMVAMYEQHADVVEAIKFFRRM-LTEKVGFDCVTLVSVLSACARSGALQTG 343

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           + VH  A    L  D  + N L+D Y+K   ++ A  +F+ +  M  +VSW++MIS    
Sbjct: 344 KWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLR-MRSVVSWSAMISAYAN 402

Query: 354 -GLFKEMLYLCSQF--------SFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
            G  +E L L S          SF T  A+L +C     +E G K  +        S   
Sbjct: 403 HGASEEALKLFSLMKNEGVRPNSF-TFTAVLVACGHSGLVEEGLKHFNSILSDYQMSPTL 461

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
                ++ M    G L+ A+ +++ +S   D   W   +  C  +G+ + A
Sbjct: 462 EHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHGNLELA 512



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 33/405 (8%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T L    S +SP SL     IH   + LG S N     +L+      G   A+ +  +R+
Sbjct: 20  TRLITAASASSPVSLRALLPIHARAIVLGVSANPAFATSLL-----AGVAPASLAYARRV 74

Query: 430 ---SHNSDTSCWNIVIVA--CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
              +   D   WN ++ A   +Q  H  + +  +K M +    +PD  T   V+ AC   
Sbjct: 75  FDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRM-RAAGVAPDHYTYPIVLPACAAA 133

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN--LCTWNC 542
              + G+++HG  ++  +  D  V +ALITMY +  ++  A  VF   +  +  + +W  
Sbjct: 134 RELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTS 193

Query: 543 MISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           M++ + QN     A+ LF  +  E   PNEI+++S L        L  G+ +HG V  LG
Sbjct: 194 MVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLG 253

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
           F  N  +++AL+ MY  C               +S A+W++M++ Y  H    EAI+ F 
Sbjct: 254 FDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFR 313

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            M    +     +++S+LSAC+ SG +  G ++ + +   + +  +      +VDM  + 
Sbjct: 314 RMLTEKVGFDCVTLVSVLSACARSGALQTG-KWVHELARNHGLDTDARIGNVLVDMYAKC 372

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
           G++  A      L ++     W AM+SA ++HG ++   ++  L+
Sbjct: 373 GEIASARNVFDCLRMRSVVS-WSAMISAYANHGASEEALKLFSLM 416


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 185/646 (28%), Positives = 309/646 (47%), Gaps = 43/646 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G   D+ +LS  + A   + +   G+ +H L +K G+ D   VS   SL+ MY +CG + 
Sbjct: 94  GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGH-DRGEVSAGTSLVDMYMKCGSVC 152

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
                F GM  K+VV+W +++ G A      E   L   M+    + P+  T  +++S  
Sbjct: 153 EGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR-AEGIWPNPFTFASVLSAV 211

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           A    L  G+ VH  +++      + + NSLM+ Y+K   +  A+ +FN +    D+VSW
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWME-TRDMVSW 270

Query: 349 NSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N++++GL            F E      + + ST   ++  C + + L   + +H   LK
Sbjct: 271 NTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK 330

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF      + AL   Y  CG+L  A ++    + + +   W  +I  C QNG    A+ 
Sbjct: 331 HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVV 390

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M ++    P+  T   ++ A     L+     +H   +K+       V  AL+  Y
Sbjct: 391 LFSRM-REDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPSVGTALLASY 445

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
            +    + A ++F+     ++  W+ M+S  +Q      A  LF  +  +   PNE +I 
Sbjct: 446 SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505

Query: 574 SILSACT--QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN----------- 620
           S++ AC     GV   G+Q H       + +   +SSAL+ MYS  K N           
Sbjct: 506 SVIDACACPSAGV-DQGRQFHAISIKYRYHDAICVSSALVSMYSR-KGNIDSAQIVFERQ 563

Query: 621 -----AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                 +W+SMIS Y  HG   +AIE F +M  SGI+    + ++++  C+H+GLV EG 
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           QY+++M+ ++ + P  EH+ C+VD+  R+GKL E    I+++P      VW  +L AC  
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRV 683

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           H + ++GK  A+ L  LEP +   Y+ LSN+Y A G+WK+  E+ K
Sbjct: 684 HKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRK 729



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 308/675 (45%), Gaps = 66/675 (9%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNS 126
           G+  DS TL  ++ A   +     G  +HCL +K G    + S     V+MY KCG +  
Sbjct: 94  GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               F GM   + V+W ++++GC H     + +  F  M   G   +  + +S ++A A 
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G L  G+ +HA  +K G   S  V V NSL++MY++CG +E A+  F  M  +D+VSWN
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSS--VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            ++ G  LN    EA  L HE +     +   +T  T+I LCA+   L   R +H   ++
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMG-KMTQSTYATVIKLCANLKQLALARQLHSCVLK 330

Query: 307 RLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
              G+ L   +M +L D YSK   L+ A  +F+      ++VSW ++ISG          
Sbjct: 331 H--GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388

Query: 355 --LFKEM---LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             LF  M     + ++F++S +L    S   P+       IH   +K  + +      AL
Sbjct: 389 VVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ-------IHAQVIKTNYQHIPSVGTAL 441

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y   G    A S+ + I    D   W+ ++    Q G  + A   F  M   Q   P
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQK-DVVAWSAMLSCHAQAGDCEGATYLFNKMA-IQGIKP 499

Query: 470 DSVTLVNVISACGNLELAF-EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           +  T+ +VI AC        +G+  H +++K        V +AL++MY R  +I SA  V
Sbjct: 500 NEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIV 559

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           FE   + +L +WN MIS ++Q+   ++A+E FR +E    + + ++ ++++  CT  G++
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLV 619

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G+Q              +  S + D   N  +   ++ M+  Y   GK  E + L  +
Sbjct: 620 VEGQQ--------------YFDSMVRDHKIN-PTMEHYACMVDLYSRAGKLDETMSLIRD 664

Query: 646 MCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNM--LEEYDVRPETEHHVCIVDM 700
           M      P  +  +   +LL AC     V+ G    + +  LE +D    +  +V + ++
Sbjct: 665 M------PFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD----SSTYVLLSNI 714

Query: 701 LGRSGKLQEAYEFIK 715
              +GK +E  E  K
Sbjct: 715 YAAAGKWKERDEVRK 729



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 268/584 (45%), Gaps = 27/584 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y         + +F     K+VVTW +++T C   +     +  F  M  EGI 
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   ++SA+     L  G+ VH  S+K G  +   +CN  +NMYAKCG +  ++  
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ M   D VSWNT+M+G   N    + L  F E   +  +    + ++ +   A L +L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
           +  + +H+  +K G+  +   +V  +L   YS+CG++  A   F   T  ++VVSW AII
Sbjct: 319 ALARQLHSCVLKHGFHLTG--NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAII 376

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   NG    A  L   M+  R V P+  T   ++   + S+L  +   +H   I+   
Sbjct: 377 SGCIQNGDIPLAVVLFSRMREDR-VMPNEFTYSAMLK-ASLSILPPQ---IHAQVIKTNY 431

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            +   +  +L+  YSK  S   A  +F  I    D+V+W++M+S             LF 
Sbjct: 432 QHIPSVGTALLASYSKFGSTEDALSIFKMIE-QKDVVAWSAMLSCHAQAGDCEGATYLFN 490

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +M     + +  T+ +++ +C  P + ++ G+  H   +K  + +     +AL+ MY   
Sbjct: 491 KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRK 550

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++ +A  + +R + + D   WN +I    Q+G+  +AI+TF+ M +      D VT + 
Sbjct: 551 GNIDSAQIVFERQT-DRDLVSWNSMISGYAQHGYSMKAIETFRQM-EASGIQMDGVTFLA 608

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDI-KSASTVFESCYN 534
           VI  C +  L  EG+      ++      T    A ++ +Y R   + ++ S + +  + 
Sbjct: 609 VIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFP 668

Query: 535 CNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
                W  ++ A   +K  E+      + L  EP++ S   +LS
Sbjct: 669 AGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLS 712



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 143/357 (40%), Gaps = 47/357 (13%)

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D   A   L  I         N V+    + G   E +  F S+ ++     DS TL  V
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQF-SVARRGGVLVDSATLSCV 105

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLD---TRVQNALITMYGRCRDIKSASTVFESCYN 534
           + AC ++     G+ LH L +K   G D        +L+ MY +C  +     VFE    
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKC--GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            N+ TW  +++  +  +     + LF  +  E   PN  +  S+LSA    G L  G+++
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           H      G + + F+ ++L++MY+ C               +   +W+++++    +   
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACS-----------HSGLVDEGLQYYNNMLEEY 685
            EA++LFHE   +  + T+S+  +++  C+           HS ++  G     N++   
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--- 340

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
                      + D   + G+L +A               W A++S C  +GD  + 
Sbjct: 341 ---------TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S++L++ YS     +S+  +F    ++D+V+WN+MI+   ++   +  +  F +M   G
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG 598

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV------FVNMYAKCG 122
           I+ D  T L ++     M C   G VV        M+ D  +          V++Y++ G
Sbjct: 599 IQMDGVTFLAVI-----MGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653

Query: 123 DLNSSECTFSGMH-CADTVSWNTIMSGC-LHNN 153
            L+ +      M   A  + W T++  C +H N
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACRVHKN 686


>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
 gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
          Length = 680

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 191/690 (27%), Positives = 335/690 (48%), Gaps = 47/690 (6%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQA 172
            + MY +CG + S+   F  M        W  ++S  +   +  + LL F++    G + 
Sbjct: 1   LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
              +  + + A +    L  GK +H L  + G+++S   S+  SLI MY +CG ++ A +
Sbjct: 61  SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 120

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
               +  +DV  W  +I   +  GK + AF+LL  M L     P   T + ++  C D  
Sbjct: 121 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDL-EGDRPSKMTFMAVLRACKDHP 179

Query: 293 LLRE-GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             R+ G  +HG    R L  D+ +  SL++ Y++     +A+ +F+ I    D+ SWN +
Sbjct: 180 EARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEA-RDVSSWNCL 238

Query: 352 ISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           ++             L++EM+    +    TL  ++  C S + LE G  IH      GF
Sbjct: 239 LAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGF 298

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           +++ +   AL+  Y  CG L AA  + + +    D   WN +I +   +   + A+  F+
Sbjct: 299 ASDLMLDTALITFYGRCGKLEAALEIFEALPAR-DNVTWNTMIASLNDHSSPEAAMGFFQ 357

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M QQ+  +P  VTL+ V+  CG++    E K +H    +S    D+ V+N LIT YGRC
Sbjct: 358 RM-QQEGMAPSRVTLLTVLGLCGSVG---EAKLVHSCVRESGFEQDSEVKNTLITAYGRC 413

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEFE----PNEISIVS 574
             +  A  +FE+       +WN M+ A++       ALELF R ++ E    P+  +I+ 
Sbjct: 414 GGLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIIL 473

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------K 618
            L++C  L     GK +   +     +E+ F+ +A++DM + C                K
Sbjct: 474 ALNSCRSLA---DGKLVISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNK 530

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
               W++M++A+  HG    A+ LF  M  + G  P + +++S+LSACSH+GL+  GLQ 
Sbjct: 531 DTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQI 590

Query: 678 YNNMLEEYDVRPET-EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
           + +   ++ V+  + E + C++D+LGR+G+LQEA   + +        +W  +L A    
Sbjct: 591 FASTASDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVR 650

Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           G+ + GK+ A  + +L+P N   ++ LSN+
Sbjct: 651 GNEEAGKRAAVKVLELDPGNAAAHVILSNL 680



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 279/601 (46%), Gaps = 33/601 (5%)

Query: 13  LLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           LL  Y      ES+  LF      ++   W  MI+A V    +   L  F + + EG+R 
Sbjct: 1   LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD--SSLCNVFVNMYAKCGDLNSSEC 129
              T + ++ A ++   L QG+ +H L  +AG       SL    + MY KCG L+ +  
Sbjct: 61  SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 120

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
               +   D   W  +++   H    ++     + M   G++   ++  + + A     E
Sbjct: 121 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPE 180

Query: 190 L-SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               G V+H L  + G E    V V  SL++MY++ GD + A+  F  +  +DV SWN +
Sbjct: 181 ARQVGGVLHGLIRERGLESD--VGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCL 238

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +  ++   + E+A  L  EM ++  V+PD  T+ T+I +CA    L +G  +H       
Sbjct: 239 LAAYSRCSRQEQALVLYREM-MLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSG 297

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
              DL++  +L+ FY +   L  A  +F A+ P  D V+WN+MI+            G F
Sbjct: 298 FASDLMLDTALITFYGRCGKLEAALEIFEAL-PARDNVTWNTMIASLNDHSSPEAAMGFF 356

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           + M       S  TLL +L  C    S+   K +H    + GF  ++   N L+  Y  C
Sbjct: 357 QRMQQEGMAPSRVTLLTVLGLCG---SVGEAKLVHSCVRESGFEQDSEVKNTLITAYGRC 413

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLV 475
           G L  A  + + +    ++S WN ++ A    G  + A++ F  M + +Q   P   T++
Sbjct: 414 GGLPQALEIFEALPRKIESS-WNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTII 472

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YN 534
             +++C +L    +GK +     +SL+  D  VQ A++ M  RC  +  AS  F     N
Sbjct: 473 LALNSCRSLA---DGKLVISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKN 529

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQ 590
            +   W  M++AF+++    RAL LF  +  +    P+E+++VS+LSAC+  G+L  G Q
Sbjct: 530 KDTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQ 589

Query: 591 I 591
           I
Sbjct: 590 I 590



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 253/588 (43%), Gaps = 31/588 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +TSL+  Y      + +  +  +  ++DV  W  MI +      +         M  EG 
Sbjct: 102 ATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGD 161

Query: 70  RFDSTTLLIIVSALTQMNCLKQ-GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           R    T + ++ A       +Q G V+H L  + G+ +D  +    VNMYA+ GD   ++
Sbjct: 162 RPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQ 221

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             FS +   D  SWN +++     +  E+ L+ +REM   G + D ++L++ +   A L 
Sbjct: 222 EVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLK 281

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +L  G  IH      G+     + +  +LI+ Y +CG +EAA   F  +  +D V+WN +
Sbjct: 282 DLEQGSRIHQQIASSGFASD--LMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTM 339

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     +   E A      MQ    + P   T++T++ LC     + E + VH       
Sbjct: 340 IASLNDHSSPEAAMGFFQRMQ-QEGMAPSRVTLLTVLGLCGS---VGEAKLVHSCVRESG 395

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              D  + N+L+  Y +   L +A  +F A+ P     SWN+M+              LF
Sbjct: 396 FEQDSEVKNTLITAYGRCGGLPQALEIFEAL-PRKIESSWNAMMGAYAAQGKPRAALELF 454

Query: 357 KEMLYLCS--QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
             M+ L    Q S ST++  L SC    SL  GK +     +     +     A++ M  
Sbjct: 455 HRMVKLEQMIQPSVSTIILALNSCR---SLADGKLVISSIPESLVEEDGFVQAAMVDMLA 511

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A     ++  N DT  W  ++ A  ++GH   A+  F++M      SPD VTL
Sbjct: 512 RCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTL 571

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTR---VQNALITMYGRCRDIKSAST-VFE 530
           V+V+SAC +  L   G  +   +  S  G+  R   +   +I + GR   ++ A   V  
Sbjct: 572 VSVLSACSHAGLLHRGLQIFA-STASDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVAS 630

Query: 531 SCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           S ++ +   W  ++ A   +   E       + LE +P   +   ILS
Sbjct: 631 SDFSGSSVLWITLLGASKVRGNEEAGKRAAVKVLELDPGNAAAHVILS 678



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 186/404 (46%), Gaps = 22/404 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  + +   TSL+  Y+     + +  +F +   +DV +WN ++ A          L  
Sbjct: 195 RGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVL 254

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + EM+ EG++ D  TL  ++     +  L+QG  +H     +G  +D  L    +  Y +
Sbjct: 255 YREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGR 314

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L ++   F  +   D V+WNT+++    ++ PE  + +F+ M   G     V+L + 
Sbjct: 315 CGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTV 374

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +     +GE    K++H+   + G+E      V N+LI+ Y +CG +  A   F  +  K
Sbjct: 375 LGLCGSVGE---AKLVHSCVRESGFEQDS--EVKNTLITAYGRCGGLPQALEIFEALPRK 429

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRS 299
              SWNA++  +A  GK   A +L H M +L + ++P ++T++  ++ C     L +G+ 
Sbjct: 430 IESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRS---LADGKL 486

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
           V       L+  D  +  +++D  ++  SL  A   F+ +    D V W +M++      
Sbjct: 487 VISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHG 546

Query: 354 ------GLFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSI 390
                 GLF+ ML          TL+++L +C+    L  G  I
Sbjct: 547 HSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQI 590


>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
 gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 167/493 (33%), Positives = 258/493 (52%), Gaps = 40/493 (8%)

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLC-SQFSFS 369
           Y+K+  L+ A  LF+ + PM D VSWN MISG             FK+M  L   +   +
Sbjct: 2   YAKNGVLTDAAKLFDEM-PMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           TL  IL +C+ PE     K +HC  +  GF       NAL+  Y  CG   +   +   +
Sbjct: 61  TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               +   W  +I    Q+  ++++++ F  MT      P+S+T ++ + AC  L+   E
Sbjct: 121 LER-NVITWTAIISGLVQSELYRDSLRLFVEMTNGL-VEPNSLTYLSSLMACSGLQALRE 178

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G  +HG   K  +  D  V++AL+ MY +C  +     +FES    +  +   +++ F+Q
Sbjct: 179 GCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQ 238

Query: 550 NKAEVRALELFRHL-----EFEPNEIS-IVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           N  E  A++ F  +     E + N +S ++ +  A T LG+   G+QIH  V    F  N
Sbjct: 239 NGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGL---GQQIHSLVIKRSFGSN 295

Query: 604 SFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
            F+ + L++MYS C                ++ +W+SMI+A+  HG G  A++L+ EM  
Sbjct: 296 PFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRL 355

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G+ PT  + +SLL ACSH GLV++G+++  +M E + + P  EH+ C+VDMLGR+G L 
Sbjct: 356 KGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLN 415

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           EA  FI+ LPI+P   VW A+L AC  HGD +MGK  AE L    PE    YI L+N+Y 
Sbjct: 416 EAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYS 475

Query: 769 ALGRWKDAVEIGK 781
           + GRWK+  +  K
Sbjct: 476 SKGRWKERAKTIK 488



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 187/386 (48%), Gaps = 18/386 (4%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY++ G +  A + F  M  +D VSWN +I GF  +G F+  F    +MQ +     D A
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T+ T++S C    L    + VH  A+      ++ + N+L+  Y K    S    +F+ +
Sbjct: 61  TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120

Query: 340 APMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFG 387
              N +++W ++ISGL +  LY  S   F             T L+ L +C+  ++L  G
Sbjct: 121 LERN-VITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREG 179

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             IH    KLG  ++    +ALM MY  CG +     + +  +   D     I++    Q
Sbjct: 180 CQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFES-AGQLDKVSMTIILAGFAQ 238

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG  +EA++ F  M  +     DS  +  V+   G       G+ +H L +K   G +  
Sbjct: 239 NGFEEEAMQFFVKML-EAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPF 297

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
           V N LI MY +C D++ ++ VF      N  +WN MI+AF+++    RAL+L++ +    
Sbjct: 298 VGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKG 357

Query: 566 -EPNEISIVSILSACTQLGVLRHGKQ 590
            EP +++ +S+L AC+ +G++  G +
Sbjct: 358 VEPTDVTFLSLLHACSHVGLVEKGME 383



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 177/358 (49%), Gaps = 16/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+T+Y    +  S + +F E   ++V+TW A+I+  V++      L  F
Sbjct: 89  GFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLRLF 148

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +  +S T L  + A + +  L++G  +H    K G+ +D  + +  ++MY+KC
Sbjct: 149 VEMTNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKC 208

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F      D VS   I++G   N + E+ + +F +M  +G + D+  +S+ +
Sbjct: 209 GSMGDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVL 268

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L  G+ IH+L IK  +  +P+V   N LI+MYS+CGD+E + + F  M C +
Sbjct: 269 GVFGADTSLGLGQQIHSLVIKRSFGSNPFVG--NGLINMYSKCGDLEDSTKVFSRMPCMN 326

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG---- 297
            VSWN++I  FA +G    A  L  EM+L + VEP   T ++L+  C+   L+ +G    
Sbjct: 327 SVSWNSMIAAFARHGDGSRALQLYKEMRL-KGVEPTDVTFLSLLHACSHVGLVEKGMEFL 385

Query: 298 ---RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                VH    R      +     ++D   ++  L++A+     +    D++ W +++
Sbjct: 386 KSMTEVHKLTPR------MEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALL 437



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 33/451 (7%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNV 175
           MYAK G L  +   F  M   DTVSWN ++SG L +   +    +F++M   G  + D  
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 176 SLSSAVAASAC-LGELSY-GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +L++ +  SAC   EL +  K++H L +  G++    +SV N+LI+ Y +CG   +  + 
Sbjct: 61  TLTTIL--SACDRPELGFVNKMVHCLAVLNGFQRE--ISVGNALITSYFKCGFSSSGMQV 116

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  M  ++V++W AII G   +  + ++  L  EM     VEP+  T ++ +  C+    
Sbjct: 117 FDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMT-NGLVEPNSLTYLSSLMACSGLQA 175

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           LREG  +HG   +  L  D  + ++LMD YSK  S+     +F +   + D VS   +++
Sbjct: 176 LREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQL-DKVSMTIILA 234

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G             F +ML   ++   + + A+L    +  SL  G+ IH   +K  F +
Sbjct: 235 GFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGS 294

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N    N L++MY  CGDL  +  +  R+   +  S WN +I A  ++G    A++ +K M
Sbjct: 295 NPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVS-WNSMIAAFARHGDGSRALQLYKEM 353

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM---GLDTRVQN--ALITMY 516
            + +   P  VT ++++ AC ++ L  +G       LKS+     L  R+++   ++ M 
Sbjct: 354 -RLKGVEPTDVTFLSLLHACSHVGLVEKGMEF----LKSMTEVHKLTPRMEHYACVVDML 408

Query: 517 GRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           GR   +  A T  E      ++  W  ++ A
Sbjct: 409 GRAGLLNEAKTFIEGLPIKPDVLVWQALLGA 439



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 213/486 (43%), Gaps = 27/486 (5%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RFDSTT 75
           Y+       +  LF E   +D V+WN MI+  +++    +G  FF +M   G  R D  T
Sbjct: 2   YAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQAT 61

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           L  I+SA  +       ++VHCL++  G   + S+ N  +  Y KCG  +S    F  M 
Sbjct: 62  LTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEML 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + ++W  I+SG + +      L  F EM     + ++++  S++ A + L  L  G  
Sbjct: 122 ERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQ 181

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH    KLG +      V ++L+ MYS+CG +    + F      D VS   I+ GFA N
Sbjct: 182 IHGRVWKLGLQSD--FCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQN 239

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  EEA     +M L    E D   V  ++ +      L  G+ +H   I+R  G +  +
Sbjct: 240 GFEEEAMQFFVKM-LEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFV 298

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            N L++ YSK   L  +  +F+ +  MN  VSWNSMI+             L+KEM    
Sbjct: 299 GNGLINMYSKCGDLEDSTKVFSRMPCMNS-VSWNSMIAAFARHGDGSRALQLYKEMRLKG 357

Query: 364 SQFSFSTLLAILPSCNS----PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGD 418
            + +  T L++L +C+      + +EF KS+    +L     +    V+    M    G 
Sbjct: 358 VEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVD----MLGRAGL 413

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNV 477
           L  A + ++ +    D   W  ++ AC  +G  +      + +       P   + L N+
Sbjct: 414 LNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANI 473

Query: 478 ISACGN 483
            S+ G 
Sbjct: 474 YSSKGR 479



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 14/164 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F ++      L+  YS     E S  +F      + V+WN+MI A   +      L  
Sbjct: 290 RSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQL 349

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-------RVVHCLSIKAGMIADSSLCNV 113
           + EM  +G+     T L ++ A + +  +++G         VH L+ +    A       
Sbjct: 350 YKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYA------C 403

Query: 114 FVNMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGCLHNNYPE 156
            V+M  + G LN ++    G+    D + W  ++  C  +  PE
Sbjct: 404 VVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPE 447


>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 578

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 162/526 (30%), Positives = 286/526 (54%), Gaps = 37/526 (7%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           + ++I  C+ S     G  ++   ++  L  D ++ NS + FY+KS+    A  +F+ + 
Sbjct: 29  IPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALKVFDTM- 87

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA-ILPSCNSPESLEFG 387
           P+ D +SWN +I+G            +FKEM Y C       L+A ++  C     ++ G
Sbjct: 88  PLKDPISWNCIINGYFQNGYFTQGFIMFKEM-YECGIVPKPELVASVVSVCVRLGDMKLG 146

Query: 388 KSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           ++IH   L  G     I V  +L+  Y   GD + A  +  +I   +  S W  ++  C+
Sbjct: 147 RAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVS-WTALVSGCS 205

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
            N  +  A+  F++M Q     P+ VTL+ ++ A   L  A  GK +HG A +    LD 
Sbjct: 206 ANLDYNMALDCFRAM-QINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDH 264

Query: 507 RVQNALITMYGRCRD-IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE- 564
              ++LI +Y R R+ ++ A   FE     ++  W+ +I ++ ++   + AL+LFR +  
Sbjct: 265 HFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRA 324

Query: 565 --FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
              EPN ++++++++ACT L  L++G   HG++   G   +++I +AL++MYS C     
Sbjct: 325 DGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVA 384

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                     K + +WS++I+AYG HG G EA+ LFHEM   G+ P   + +++LSAC+H
Sbjct: 385 SHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNH 444

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           SGLV EG Q ++N+ ++  V    EH+ C+VD+LG+SGK+ +A++ ++ +P++P   +W 
Sbjct: 445 SGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWS 504

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +++SAC  HG  ++ +++A+ L K EP N   +  LS +Y   G W
Sbjct: 505 SLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGNW 550



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 248/502 (49%), Gaps = 35/502 (6%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L F+ E+    I  ++  +  ++ A +  NC   G  ++ + +K+G+ +D  +CN F++ 
Sbjct: 11  LKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISF 70

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAK     S+   F  M   D +SWN I++G   N Y  +  + F+EM   G       +
Sbjct: 71  YAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELV 130

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S V+    LG++  G+ IHAL +  G   +  + V  SL+  Y + GD   A R F  +
Sbjct: 131 ASVVSVCVRLGDMKLGRAIHALVLIDG-RIAKEIFVLTSLVDWYFKSGDSLMALRVFDQI 189

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K+VVSW A++ G + N  +  A D    MQ+   V P+  T++ ++   A+    + G
Sbjct: 190 EVKNVVSWTALVSGCSANLDYNMALDCFRAMQI-NGVRPNRVTLIAILPAFAELGCAKTG 248

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS-LSKAELLFNAIAPMNDLVSWNSMISG-- 354
           + +HGYA R     D   ++SL+  Y +S   L  A+L F   + + D+V W+S+I    
Sbjct: 249 KEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFER-SNVKDVVMWSSIIGSYC 307

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF+ M    ++ +  TLLA++ +C +  SL+ G   H + +K G + +T 
Sbjct: 308 RSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTY 367

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL++MY  CG +VA+  + + + H  D+  W+ +I A   +GH +EA+  F  M Q 
Sbjct: 368 IGNALINMYSKCGCVVASHQIFKEM-HIKDSVSWSTLITAYGLHGHGKEALCLFHEM-QL 425

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL---------------HGLALKSLMGLDTRVQ 509
           Q   PD++T + V+SAC +  L  EG+ +               H   L  L+G   +V 
Sbjct: 426 QGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVD 485

Query: 510 NALITMYGRCRDIKSASTVFES 531
           +A   +  R   +K ++T++ S
Sbjct: 486 DAFDIL--RAMPMKPSTTIWSS 505



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 229/485 (47%), Gaps = 21/485 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S ++ Y+  S  ES+L +F     KD ++WN +I    +N     G   F EM E GI  
Sbjct: 66  SFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVP 125

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSECT 130
               +  +VS   ++  +K GR +H L +  G IA         V+ Y K GD   +   
Sbjct: 126 KPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRV 185

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   + VSW  ++SGC  N      L  FR M  +G + + V+L + + A A LG  
Sbjct: 186 FDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCA 245

Query: 191 SYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAI 248
             GK IH    + G++ D  ++S   SLI +Y +  + ++ A+  F     KDVV W++I
Sbjct: 246 KTGKEIHGYAFRHGFDLDHHFLS---SLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSI 302

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +  +    EA  L   M+     EP+  T++ +I+ C     L+ G   HGY ++  
Sbjct: 303 IGSYCRSADSIEALKLFRWMR-ADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCG 361

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L +D  + N+L++ YSK   +  +  +F  +  + D VSW+++I+             LF
Sbjct: 362 LNFDTYIGNALINMYSKCGCVVASHQIFKEM-HIKDSVSWSTLITAYGLHGHGKEALCLF 420

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYIN 415
            EM     +    T LA+L +CN    ++ G+ I     K G  + T+   A L+ +   
Sbjct: 421 HEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGK 480

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G +  AF +L+ +     T+ W+ ++ AC  +G  + A +  + + + + ++  + TL+
Sbjct: 481 SGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLL 540

Query: 476 NVISA 480
           ++I A
Sbjct: 541 SMIYA 545


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 157/517 (30%), Positives = 273/517 (52%), Gaps = 42/517 (8%)

Query: 299 SVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
            +H  A+R  LL  D     +L+  Y +   +  A   F+ +    D+ +WN+M+SGL  
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMR-HRDVPAWNAMLSGLCR 147

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F  M+         T+ ++LP C          ++H + +K G  +    
Sbjct: 148 NARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFV 207

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            NA++ +Y   G L     +   +S + D   WN +I    Q G    A++ F  M +  
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMS-SRDLVTWNSIISGHEQGGQVASAVEMFCGM-RDS 265

Query: 466 NASPDSVTLVNVISA---CGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRD 521
             SPD +TL+++ SA   CG++     G+S+H   ++    + D    NA++ MY +   
Sbjct: 266 GVSPDVLTLLSLASAIAQCGDI---CGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSK 322

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILS 577
           I++A  +F+S    +  +WN +I+ + QN     A+ ++ H++     +P + + VS+L 
Sbjct: 323 IEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLP 382

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           A + LG L+ G ++H      G   + ++ + ++D+Y+ C               +S   
Sbjct: 383 AYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGP 442

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+++IS  G HG G +A+ LF +M   GI P   + +SLL+ACSH+GLVD+G  ++N M 
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQ 502

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
             Y ++P  +H+ C+VDM GR+G+L +A++FI+N+PI+P   +WGA+L AC  HG+ +MG
Sbjct: 503 TAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMG 562

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           K  ++ LF+L+P+NVGYY+ +SNMY  +G+W    E+
Sbjct: 563 KVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEV 599



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 246/521 (47%), Gaps = 55/521 (10%)

Query: 95  VHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           +H  +++ G++  D+      V+ Y + G +  +   F  M   D  +WN ++SG   N 
Sbjct: 90  LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
              + +  F  M   G   D V++SS +     LG+ +    +H   +K G +D  +  V
Sbjct: 150 RAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF--V 207

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N++I +Y + G +E   + F GM+ +D+V+WN+II G    G+   A ++   M+    
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMR-DSG 266

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLMDFYSKSNSLS 330
           V PD+ T+++L S  A    +  GRSVH Y +RR  G+   D++  N+++D Y+K + + 
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRR--GWDVGDIIAGNAIVDMYAKLSKIE 324

Query: 331 KAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF--------STLLAILPS 377
            A+ +F+++ P+ D VSWN++I+     GL  E +++               T +++LP+
Sbjct: 325 AAQRMFDSM-PVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPA 383

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
            +   +L+ G  +H   +K G + +      ++ +Y  CG L  A  L ++    S T  
Sbjct: 384 YSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRS-TGP 442

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN VI     +GH  +A+  F  M QQ+  SPD VT V++++AC +  L  +G++     
Sbjct: 443 WNAVISGVGVHGHGAKALSLFSQM-QQEGISPDHVTFVSLLAACSHAGLVDQGRNFF--- 498

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
                       N + T YG    IK  +             + CM+  F +      A 
Sbjct: 499 ------------NMMQTAYG----IKPIAK-----------HYACMVDMFGRAGQLDDAF 531

Query: 558 ELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
           +  R++  +P+     ++L AC   G +  GK    ++F L
Sbjct: 532 DFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFEL 572



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 211/457 (46%), Gaps = 15/457 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S +L+ AY        +   F E  ++DV  WNAM++    N      +  FG MV EG
Sbjct: 106 ASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEG 165

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D+ T+  ++     +        +H  ++K G+  +  +CN  +++Y K G L    
Sbjct: 166 VAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVR 225

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F GM   D V+WN+I+SG          +  F  M  SG   D ++L S  +A A  G
Sbjct: 226 KVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG 285

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           ++  G+ +H   ++ G++    ++  N+++ MY++   IEAA+R F  M  +D VSWN +
Sbjct: 286 DICGGRSVHCYMVRRGWDVGDIIA-GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTL 344

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG   EA  +   MQ    ++P   T V+++   +    L++G  +H  +I+  
Sbjct: 345 ITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTG 404

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+ +   ++D Y+K   L +A LLF    P      WN++ISG            LF
Sbjct: 405 LNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ-TPRRSTGPWNAVISGVGVHGHGAKALSLF 463

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
            +M          T +++L +C+    ++ G++  +  Q   G          ++ M+  
Sbjct: 464 SQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGR 523

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            G L  AF  ++ +    D++ W  ++ AC  +G+ +
Sbjct: 524 AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVE 560


>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 182/589 (30%), Positives = 296/589 (50%), Gaps = 40/589 (6%)

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP-DIA 279
           Y+  G +  A + F  +  +D+  +  +I  + LN        L   M+L     P D  
Sbjct: 75  YASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYV 134

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
               +   CA+S   +     H + ++ L   D  ++  L+D Y+K   + +A   F+ I
Sbjct: 135 LFSIVFKSCAESRDFQTLTITHCHFVKSLPS-DSFVLTCLVDAYAKFARVDEATRAFDEI 193

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
              +D+VSW SMI              LF  M       +  T+ +++ +C     L  G
Sbjct: 194 HENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQG 253

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVA 444
           K +H + +K G   N+    +L++MY+ CG++  A   F      S++ D   W  +IV 
Sbjct: 254 KWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVG 313

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
            +Q G+   A++ FK   +     P+SVT+ +++S+C  L  +  GK LHGLA+K   GL
Sbjct: 314 YSQRGYPHLALELFKD-KKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKC--GL 370

Query: 505 DTR-VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           D   V+NAL+ MY +C  +  A  VFE+    ++ +WN +IS F Q+     AL LFR +
Sbjct: 371 DDHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRM 430

Query: 564 E---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISSALLDMYSNC-- 617
               F P+ +++V ILSAC  LG+L  G  +HG     G   +S ++ +ALL+ Y+ C  
Sbjct: 431 GLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGD 490

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
                        K+   W +MI  YG  G G  ++ LF +M    + P +    ++L+A
Sbjct: 491 ARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAA 550

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           CSHSG+V EG + +N M  E +  P  +H+ C+VDML R+G L+EA +FI+ +P+QP   
Sbjct: 551 CSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVS 610

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           V+GA L  C  H   ++G    + + +L P+   YY+ +SN+Y + GRW
Sbjct: 611 VFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRW 659



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 241/486 (49%), Gaps = 32/486 (6%)

Query: 3   FLAHLPTSTSLLT----AYSNVSYFESSLALFYETC-NKDVVTWNAMITACVENRCVVMG 57
           F+  LP+ + +LT    AY+  +  + +   F E   N DVV+W +MI A V+N C   G
Sbjct: 159 FVKSLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREG 218

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  F  M E  +  +  T+  +VSA T++N L QG+ VH   IK G+  +S L    +NM
Sbjct: 219 LTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNM 278

Query: 118 YAKCGDLNSSECTF----SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           Y KCG++  +   F    S  +  D VSW  ++ G     YP   L  F++  WSG   +
Sbjct: 279 YVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPN 338

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +V++SS +++ A LG    GK++H L +K G +D P   V N+L+ MY++CG +  A   
Sbjct: 339 SVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDDHP---VRNALVDMYAKCGVVSDARCV 395

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  M  KDVVSWN+II GF  +G+  EA +L   M L     PD  TVV ++S CA   +
Sbjct: 396 FEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGL-ELFSPDAVTVVGILSACASLGM 454

Query: 294 LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           L  G SVHG A++  L+   + +  +L++FY+K      A ++F+++   N  V+W +MI
Sbjct: 455 LHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKN-AVTWGAMI 513

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL---KL 397
            G            LF++ML    + +      IL +C+   S   G+    + L   +L
Sbjct: 514 GGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACS--HSGMVGEGSRLFNLMCGEL 571

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            F  +      ++ M    G+L  A   ++R+      S +   +  C  +  F+     
Sbjct: 572 NFVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAA 631

Query: 458 FKSMTQ 463
            K M +
Sbjct: 632 IKKMLE 637



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 164/419 (39%), Gaps = 71/419 (16%)

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           F  S L   LPS          K++H   L  G +N+ +    L+ +Y + G L  A  +
Sbjct: 37  FYLSRLCTNLPSL---------KTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKI 87

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              +    D  C+ ++I A   N      +  ++ M    + +P    L +++       
Sbjct: 88  FNHLP-TRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAES 146

Query: 486 LAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCTWNCM 543
             F+  ++ H   +KSL   D+ V   L+  Y +   +  A+  F+  + N ++ +W  M
Sbjct: 147 RDFQTLTITHCHFVKSLPS-DSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSM 205

Query: 544 ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I A+ QN      L LF  +     + NE ++ S++SACT+L  L  GK +HG V   G 
Sbjct: 206 IVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGI 265

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
             NS++++                S+++ Y   G   +A ++F E               
Sbjct: 266 CVNSYLTT----------------SLLNMYVKCGNIQDACKVFDE--------------- 294

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP-- 718
                S S   D  L  +  M+  Y  R                G    A E  K+    
Sbjct: 295 -----SSSSSYDRDLVSWTAMIVGYSQR----------------GYPHLALELFKDKKWS 333

Query: 719 -IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
            I P      ++LS+C+  G++ MGK +  L  K   ++     +L +MY   G   DA
Sbjct: 334 GILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLDDHPVRNALVDMYAKCGVVSDA 392


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 296/568 (52%), Gaps = 34/568 (5%)

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN+ I G    G   +A  L H+++L   ++P+  T   L   CA    L   + +H + 
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKL-NGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHV 78

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++     D+ +  +++D Y K   +  A  LF+ + P+ ++ SWN+MI G          
Sbjct: 79  VKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKM-PVRNIASWNAMIIGFSQIGSLDRV 137

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF  M  + ++   +T++ +  +  S +SL F K++H   ++ G   +T   N  +  
Sbjct: 138 FNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAA 197

Query: 413 YINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y  CG+L  A  +   I   + +S  WN +I      G + +A+K++K +       PD+
Sbjct: 198 YSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCD-GFKPDA 256

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T+++++S+C   E    G  +HG   +     D  + N LI+MY RC DI SA+ +F+ 
Sbjct: 257 STIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDG 316

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHG 588
                  +W  MIS +S+      AL LF  +E    +P+ ++++S++S C + G L  G
Sbjct: 317 MSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLG 376

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
             I  +      +++  + +AL+DMY+ C               ++  +W++MI+A   +
Sbjct: 377 HWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALN 436

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G+  EA++LF  +  SGI P   + +++L AC H G +++G + +  M E Y + P  +H
Sbjct: 437 GEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDH 496

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
           + C++D+LGR GKL EA E I+++P++P  G+WGA+L AC  H + ++G+ V+  LF+L+
Sbjct: 497 YSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQ 556

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           P     ++ ++N+Y ++GRW +   + K
Sbjct: 557 PRVAVSFVEMANIYASVGRWDEVAAMRK 584



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 234/460 (50%), Gaps = 23/460 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F + +   T+++  Y      + +  LF +   +++ +WNAMI    +   +    + F 
Sbjct: 83  FYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFM 142

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M   G R D+ T++ +  A+     L+  + VH + I+ G+ AD+S+ N ++  Y+KCG
Sbjct: 143 GMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCG 202

Query: 123 DLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           +L  ++  F G+      +VSWN++++   H       +  ++ +   G + D  ++ S 
Sbjct: 203 ELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISL 262

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++      L YG +IH  G +LG +    +S+ N+LISMYS+CGDI +A   F GM+ +
Sbjct: 263 LSSCQQPEALIYGFLIHGHGFQLGCDSD--ISLINTLISMYSRCGDISSATILFDGMSIR 320

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSW A+I G++  G+ ++A  L + M+     +PDI TV++LIS C  +  L  G  +
Sbjct: 321 TCVSWTAMISGYSEVGRVDDALVLFNAME-ETGEKPDIVTVLSLISGCGKTGALGLGHWI 379

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
             YA    L  D+++ N+L+D Y+K  SL+ A  +F ++ P   +VSW +MI+     G 
Sbjct: 380 DNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSL-PNRTVVSWTAMIAACALNGE 438

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL---KLGFSNNTIG 405
           F+E L L S  S S       T LA+L +C     LE G+   C+ +   + G +     
Sbjct: 439 FREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGR--ECFMMMTERYGINPGLDH 496

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            + ++ +    G L+ A  ++Q +    D   W  ++ AC
Sbjct: 497 YSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGAC 536



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 258/575 (44%), Gaps = 56/575 (9%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN+ I   V        L  F ++   G++ ++ T   +  A  +++ L   +++H   +
Sbjct: 20  WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           K+   +D  +    V+MY KCG ++ +   F  M   +  SWN ++ G       ++   
Sbjct: 80  KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
            F  M   G + D  ++     A      L + K +HA+GI+ G +     SV+N+ I+ 
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDAD--TSVSNTWIAA 197

Query: 221 YSQCGDIEAAERAFWGM--TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           YS+CG+++ A+  F G+  T +  VSWN++I  +A  GK+ +A      + L    +PD 
Sbjct: 198 YSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGL-LCDGFKPDA 256

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
           +T+++L+S C     L  G  +HG+  +     D+ ++N+L+  YS+   +S A +LF+ 
Sbjct: 257 STIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDG 316

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEF 386
           ++ +   VSW +MISG            LF  M     +    T+L+++  C    +L  
Sbjct: 317 MS-IRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGL 375

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G  I  +        + +  NAL+ MY  CG L  A  +   + + +  S W  +I AC 
Sbjct: 376 GHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVS-WTAMIAACA 434

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKSLMG 503
            NG F+EA+  F S+  +    P+++T + V+ AC   G LE   E            M 
Sbjct: 435 LNGEFREALDLF-SLLSESGIEPNNITFLAVLQACCHGGYLEKGRE----------CFMM 483

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           +  R        YG                N  L  ++CMI    +    + ALE+ + +
Sbjct: 484 MTER--------YG---------------INPGLDHYSCMIDLLGRKGKLIEALEVIQDM 520

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
             +P+E    ++L AC     +  G+ +  ++F L
Sbjct: 521 PMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFEL 555



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 147/299 (49%), Gaps = 5/299 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFY--ETCNKDVVTWNAMITACVENRCVVMGLH 59
           G  A    S + + AYS     + +  +F+  +   +  V+WN++I         V  + 
Sbjct: 183 GLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVK 242

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +  ++ +G + D++T++ ++S+  Q   L  G ++H    + G  +D SL N  ++MY+
Sbjct: 243 SYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYS 302

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           +CGD++S+   F GM     VSW  ++SG       +  L+ F  M  +GE+ D V++ S
Sbjct: 303 RCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLS 362

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++     G L  G  I        +E    V V N+LI MY++CG +  A   F+ +  
Sbjct: 363 LISGCGKTGALGLGHWIDNYASL--HELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPN 420

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           + VVSW A+I   ALNG+F EA DL   +     +EP+  T + ++  C     L +GR
Sbjct: 421 RTVVSWTAMIAACALNGEFREALDLFSLLS-ESGIEPNNITFLAVLQACCHGGYLEKGR 478



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH-SG 669
           L+ +S   +   W+S I      G   +A+ LFH++  +G++P   +   L  AC+  S 
Sbjct: 8   LNCFSKLSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSH 67

Query: 670 LVDEGLQYYNNMLEEY--DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           L +  + + + +   +  D+  +T     +VDM  + GK+ +AY     +P++     W 
Sbjct: 68  LTNSQIIHTHVVKSPFYSDIYVQT----AMVDMYVKCGKVDDAYNLFDKMPVR-NIASWN 122

Query: 728 AMLSACSHHG 737
           AM+   S  G
Sbjct: 123 AMIIGFSQIG 132


>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
 gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
          Length = 706

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 182/624 (29%), Positives = 307/624 (49%), Gaps = 73/624 (11%)

Query: 196 IHALGIKLGYEDSPY--VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           +HA  +K G   SP   ++ TNSL+  Y QCG +  A R   G   +D  ++ ++I    
Sbjct: 48  LHAALLKSGALRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHC 107

Query: 254 LNGKFEEAF----DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             G   +A     D+L       +V P+  T   ++  C  +   R GR VHGY +    
Sbjct: 108 RLGAPLDALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGF 167

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D  ++ SL++ Y+K+  +  A  L   + P  D+VSW ++ISG            +F 
Sbjct: 168 CGDPFVVGSLVNMYAKAGDVVSARRLVLGL-PCRDVVSWTAIISGCVLNGMLEEGLEVFV 226

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            ML      +  T+L+++ +C+   + E    +H   + L   ++   VN+L+ MY    
Sbjct: 227 MMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLIMMY---- 282

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVN 476
                                        +NG  +EAI  F+    +  N   +   L  
Sbjct: 283 ----------------------------AKNGFVEEAIWLFRGFYLKSGNVCSNEDVLAA 314

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           V+  C        G  +H   +K        ++N+L+ MY R   I +A  VFE     +
Sbjct: 315 VLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGMKVKD 374

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE-----FEPNEISIVSILSACTQLGVLRHGKQI 591
           + +WN +IS  +++     A+ELF  L        P+ ++++SIL AC+  G+L  G+ +
Sbjct: 375 IVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQML 434

Query: 592 HGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKG 636
           HG++   GF  +  I +AL+ MY+               + K   +W+SMI+AYG HG G
Sbjct: 435 HGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDG 494

Query: 637 WEAIELFHEMCNSGIR-PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             A+ +FH++ ++G   P   + +S++SACSHSGL+ EG + + +M  ++ + P  +H+ 
Sbjct: 495 HLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGRDHSIEPSMDHYA 554

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGRSG+  EA EFI+++P+ P   +WG +L+AC  HG+  + ++ A+ L  LEPE
Sbjct: 555 CVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKELSALEPE 614

Query: 756 NVGYYISLSNMYVALGRWKDAVEI 779
           +  + +SLSN Y + GRW+DA +I
Sbjct: 615 SDIWRVSLSNTYASAGRWRDAAKI 638



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 172/672 (25%), Positives = 278/672 (41%), Gaps = 102/672 (15%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   A L  + SLL AY        +L L   T  +D  T+ ++I+A       +  L  
Sbjct: 59  RSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRA 118

Query: 61  FGEMVEEG-----IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           F +M++ G     +R +  T   ++ A       + GR+VH   +  G   D  +    V
Sbjct: 119 FLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLV 178

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           NMYAK GD+ S+     G+ C D VSW  I+SGC+ N   E+ L  F  M   G   +NV
Sbjct: 179 NMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNV 238

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           ++ S + A + +G       +HAL + L  E     SV NSLI MY++ G +E A   F 
Sbjct: 239 TMLSVIQACSLMGASELFSPVHALVVLLELEHD--ASVVNSLIMMYAKNGFVEEAIWLFR 296

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
           G   K              +G      D+L                  ++  C  S  ++
Sbjct: 297 GFYLK--------------SGNVCSNEDVL----------------AAVLYGCTISGSVK 326

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
            G  VH + I+      + + NSLM  Y++   +  A  +F  +  + D+VSWN++IS L
Sbjct: 327 NGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGM-KVKDIVSWNTIISCL 385

Query: 356 FK-----EMLYLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
            K     E + L S            F T+L+IL +C++   L  G+ +H + +K GF  
Sbjct: 386 AKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVY 445

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +    NAL+ MY   G +  A  + +R+    D   WN +I A   +G    A++ F  +
Sbjct: 446 DVSICNALITMYAKLGRIDFAEMIFERMD-IKDLVSWNSMINAYGMHGDGHLALRVFHQL 504

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                  P+++T V+VISAC +  L  EG           MG D  ++            
Sbjct: 505 KDAGTPVPNAITFVSVISACSHSGLISEGYKCF-----ESMGRDHSIEP----------- 548

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQ 581
                         ++  + C++    ++     A E  R +   PN      +L+AC  
Sbjct: 549 --------------SMDHYACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAAC-- 592

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWS-SMISAYGYHGKGWEAI 640
                   Q+HG+V      E +    + L+  S+      W  S+ + Y   G+  +A 
Sbjct: 593 --------QLHGNV---DLAEKAAKELSALEPESDI-----WRVSLSNTYASAGRWRDAA 636

Query: 641 ELFHEMCNSGIR 652
           ++  EM   G+R
Sbjct: 637 KIRTEMRRVGLR 648


>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 611

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 160/503 (31%), Positives = 271/503 (53%), Gaps = 40/503 (7%)

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           +L  N ++ ++ K   + +A  LF+ + P  D+V+W +MI+G             F EM 
Sbjct: 46  ILATNLIVSYFEKG-LVEEARSLFDEM-PERDVVAWTAMITGYASSNYNSCAWECFHEMF 103

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG-DL 419
                 +  TL ++L SC + + L +G  +H   +KLG   +    NALM+MY  C   +
Sbjct: 104 KQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTM 163

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT-QQQNASPDSVTLVNVI 478
            AAF + + I   +D + W  +I   T  G     +K +K M  +  + +P  +T+   +
Sbjct: 164 EAAFLIFRDIKVKNDVT-WTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIA--V 220

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            A  +++    GK +H   +K     +  V N+++  Y RC  +  A   F    + +L 
Sbjct: 221 RASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLI 280

Query: 539 TWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TWN +IS   ++ +   AL +F+  E   F PN  +  S+++AC  +  L  G+Q+HG +
Sbjct: 281 TWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339

Query: 596 FHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEA 639
           +  GF +N  +++AL+DMY+ C                ++  +W+SM+  YG HG G EA
Sbjct: 340 YRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEA 399

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           +ELF +M +SGIRP +   +++LSAC H+GLV++GL+Y+N M  EY + P+ + + C+VD
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM-GKQVAELLFKLEPENVG 758
           +LGR+GK+ EAYE ++ +P +P    WGA+L AC  H  T +  +  A+ + +L+P  VG
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVG 519

Query: 759 YYISLSNMYVALGRWKDAVEIGK 781
            Y+ LS +Y A G+W +   + K
Sbjct: 520 TYVMLSYIYAAEGKWVEFARVRK 542



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 215/459 (46%), Gaps = 18/459 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           H   +T+L+ +Y      E + +LF E   +DVV W AMIT    +         F EM 
Sbjct: 44  HHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMF 103

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DL 124
           ++G   +  TL  ++ +   M  L  G +VH + +K GM     + N  +NMYA C   +
Sbjct: 104 KQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTM 163

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
            ++   F  +   + V+W T+++G  H       L  +++M           ++ AV AS
Sbjct: 164 EAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRAS 223

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A +  ++ GK IHA  +K G++ +  + V NS++  Y +CG +  A+R F  M  KD+++
Sbjct: 224 ASIDSVTTGKQIHASVVKRGFQSN--LPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLIT 281

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I     +    EA  +    +    V P+  T  +L++ CA+   L  G+ +HG  
Sbjct: 282 WNTLISELERSDS-SEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRI 339

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            RR    ++ + N+L+D Y+K   +  +E +F  I    +LVSW SM+ G          
Sbjct: 340 YRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEA 399

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
             LF +M+    +      +A+L +C     +E G K  +  + + G + +    N ++ 
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           +    G +  A+ L++R+    D S W  ++ AC  + H
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 228/491 (46%), Gaps = 48/491 (9%)

Query: 206 EDSPYVS-----VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           E  PY       +  +LI  Y + G +E A   F  M  +DVV+W A+I G+A +     
Sbjct: 35  ESPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSC 94

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A++  HEM   +   P+  T+ +++  C +  +L  G  VHG  ++  +   L + N+LM
Sbjct: 95  AWECFHEM-FKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALM 153

Query: 321 DFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           + Y+  S ++  A L+F  I   ND V+W ++I+G            ++K+ML   +  +
Sbjct: 154 NMYATCSVTMEAAFLIFRDIKVKND-VTWTTLITGFTHLGDGIGGLKMYKQMLLENADVT 212

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
              +   + +  S +S+  GK IH   +K GF +N   +N+++  Y  CG L  A     
Sbjct: 213 PYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFH 272

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +  + D   WN +I    ++    EA+  F+   + Q   P+  T  ++++AC N+   
Sbjct: 273 EM-EDKDLITWNTLISELERSDS-SEALLMFQRF-ESQGFVPNCYTFTSLVAACANIAAL 329

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISA 546
             G+ LHG   +     +  + NALI MY +C DI  +  VF E     NL +W  M+  
Sbjct: 330 NCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIG 389

Query: 547 FSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           +  +     A+ELF  +      P+ I  +++LSAC   G++  G +      +    E+
Sbjct: 390 YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK------YFNVMES 443

Query: 604 SFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
            +  +   D+Y NC        ++   G  GK  EA EL   M     +P +S+  ++L 
Sbjct: 444 EYGINPDRDIY-NC--------VVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILG 491

Query: 664 AC---SHSGLV 671
           AC    H+GL+
Sbjct: 492 ACKAHKHTGLI 502



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 6/252 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF ++LP   S+L  Y    Y   +   F+E  +KD++TWN +I+  +E       L  
Sbjct: 242 RGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISE-LERSDSSEALLM 300

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F     +G   +  T   +V+A   +  L  G+ +H    + G   +  L N  ++MYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAK 360

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CGD+  SE  F  +    + VSW ++M G   + Y  + +  F +M  SG + D +   +
Sbjct: 361 CGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420

Query: 180 AVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            ++A    G +  G K  + +  + G   +P   + N ++ +  + G I  A      M 
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGI--NPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478

Query: 239 CK-DVVSWNAII 249
            K D  +W AI+
Sbjct: 479 FKPDESTWGAIL 490


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 171/525 (32%), Positives = 272/525 (51%), Gaps = 44/525 (8%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GR++H +AI   L  DL +  +L+D Y K   L  A  +F A  P  DLV+WN+M++G  
Sbjct: 29  GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF-ATMPARDLVAWNAMLAGYA 87

Query: 357 KEMLY-------LCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
              +Y       L  Q          STL+A+LP      +L  G S+H + ++     N
Sbjct: 88  HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 147

Query: 403 -------TIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
                  T GV    AL+ MY  CG L+ A  +   +   ++ + W+ +I          
Sbjct: 148 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WSALIGGFVLCSRMT 206

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +A   FK+M  Q        ++ + + AC +L+    G+ LH L  KS +  D    N+L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNE 569
           ++MY +   I  A  +F+     +  +++ ++S + QN     A  +F+ ++    EP+ 
Sbjct: 267 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 326

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            ++VS++ AC+ L  L+HG+  HG V   G    + I +AL+DMY+ C            
Sbjct: 327 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 386

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   +W++MI+ YG HG G EA  LF EM N G  P   + I LLSACSHSGLV EG
Sbjct: 387 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
             +++ M   Y + P  EH++C+VD+L R G L EAYEFI+++P++    VW A+L AC 
Sbjct: 447 KHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 506

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            + +  +GK+V+ ++ +L PE  G ++ LSN+Y A GR+ +A E+
Sbjct: 507 VYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 551



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 244/522 (46%), Gaps = 45/522 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HF 60
           G  A L  ST+LL  Y   +    +  +F     +D+V WNAM+     +      + H 
Sbjct: 40  GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99

Query: 61  FG-EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---------- 109
              +M    +R +++TL+ ++  L Q   L QG  VH   I+A +  + +          
Sbjct: 100 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L    ++MYAKCG L  +   F  M   + V+W+ ++ G +  +   +  L F+ M   G
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219

Query: 170 E-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
                  S++SA+ A A L  L  G+ +HAL  K G      ++  NSL+SMY++ G I+
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD--LTAGNSLLSMYAKAGLID 277

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A   F  M  KD VS++A++ G+  NG+ EEAF +  +MQ   +VEPD AT+V+LI  C
Sbjct: 278 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPAC 336

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +    L+ GR  HG  I R L  +  + N+L+D Y+K   +  +  +FN + P  D+VSW
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN-MMPSRDIVSW 395

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N+MI+G            LF EM  L       T + +L +C+    +  GK    W   
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH---WFHV 452

Query: 397 LGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +G   +  G+   M  YI   DL++       A+  +Q +   +D   W  ++ AC    
Sbjct: 453 MG---HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYK 509

Query: 450 HFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
           +     K    M Q+     + + V L N+ SA G  + A E
Sbjct: 510 NIDLG-KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 550



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 204/433 (47%), Gaps = 28/433 (6%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           SAL   +C   GR +H  +I AG+ AD  +    ++MY KC  L  +   F+ M   D V
Sbjct: 21  SALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 77

Query: 141 SWNTIMSGCLHNNYPEKCLLYF--REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +WN +++G  H+      + +    +M     + +  +L + +   A  G L+ G  +HA
Sbjct: 78  AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 137

Query: 199 LGIKLGYED--------SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             I+             +  V +  +L+ MY++CG +  A R F  M  ++ V+W+A+I 
Sbjct: 138 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 197

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF L  +  +AF L   M           ++ + +  CA    LR G  +H    +  + 
Sbjct: 198 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVH 257

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            DL   NSL+  Y+K+  + +A  LF+ +A + D VS+++++SG            +FK+
Sbjct: 258 ADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAEEAFLVFKK 316

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +   +T+++++P+C+   +L+ G+  H   +  G ++ T   NAL+ MY  CG 
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 376

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  +  +   +  + D   WN +I     +G  +EA   F  M       PD VT + ++
Sbjct: 377 IDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMN-NLGFPPDGVTFICLL 434

Query: 479 SACGNLELAFEGK 491
           SAC +  L  EGK
Sbjct: 435 SACSHSGLVIEGK 447


>gi|242093006|ref|XP_002436993.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
 gi|241915216|gb|EER88360.1| hypothetical protein SORBIDRAFT_10g014210 [Sorghum bicolor]
          Length = 698

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 201/671 (29%), Positives = 328/671 (48%), Gaps = 54/671 (8%)

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           M G    + P K + Y + +  +   AD V +   +AA   L    +    H + IKLG 
Sbjct: 1   MGGTHRLHRPVKEIEYSQPLT-AARAADAVPMRDPLAA--LLRSGGHPHSAHGVAIKLGC 57

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL- 264
             S ++   N+L+  Y        A R F  M+ +++VSW+ +I G A +G   EAF L 
Sbjct: 58  IASTFL--CNNLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARHGVLAEAFALF 115

Query: 265 ---LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
              LH         PD   +  L++ C+ +  +  G  VH    +  +  D  +  +L+D
Sbjct: 116 SHMLHGAGQGSWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDEDESVAAALVD 175

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--------SG-------LFKEMLYLCSQF 366
            Y+K   +  +   F  +AP   ++SW SMI        SG       LFK+ML L    
Sbjct: 176 MYAKCGWVDSSWRAFT-LAPQRSVLSWTSMIACLVNQGSSGYHDAAMLLFKKMLALKVWP 234

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           +  T   IL   N+P+ L  G  IH   LK+G   +T   +ALM MY  CG +     L 
Sbjct: 235 TNVTFSCILKVFNTPDLLSVGMQIHGCLLKIGTEVDTALGSALMTMYGRCGGVDEIARLA 294

Query: 427 QRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT--LVNVISACG 482
            RI H+  S TS    ++ A  +NG+  EAI  FK M     A   S    L+ V S+ G
Sbjct: 295 CRIRHDVFSRTS----LLGAYARNGYNAEAIGVFKEMILTNMAIDQSAMTCLLQVCSSVG 350

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
            L +  E   +H  ALK+   LDT + NA+IT+YGRC D  SA TVF      ++ +W  
Sbjct: 351 QLRMVRE---VHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEEQDIISWTA 407

Query: 543 MISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           +++ ++QN  +   L  FR +           + S+L AC++   L  G QIH     LG
Sbjct: 408 LLTCYAQNGLDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVKLG 467

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
             +++ + +AL+ +Y+NC               +    W+++++++  HG    AI+LF 
Sbjct: 468 IDDDNSVENALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGNEVAAIQLFD 527

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            M    + P   + + LLS+CS  GLV EG +Y+N M  +Y++ P+  H+ C+VD+  R+
Sbjct: 528 LMQEEEVCPDDYTFVGLLSSCSRMGLVKEGCEYFNEMKAKYNLEPKMVHYTCMVDLFARA 587

Query: 705 GKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           G+  +A +FI  +P +P   +W A+L++C  HG+  +G+  A+ + ++ P +   YI+LS
Sbjct: 588 GRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGLGRIAAKKILEITPHDYSAYITLS 647

Query: 765 NMYVALGRWKD 775
           +++ ++  W +
Sbjct: 648 SIHASVDMWDE 658



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 153/602 (25%), Positives = 277/602 (46%), Gaps = 65/602 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--- 68
           +LL AY + S    +  LF E   +++V+W+ +I+    +  +      F  M+      
Sbjct: 66  NLLHAYLSRSVPAHARRLFDEMSRRNLVSWSVVISGSARHGVLAEAFALFSHMLHGAGQG 125

Query: 69  --IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              R DS  L  +V+  ++   +  G  VH    K G+  D S+    V+MYAKCG ++S
Sbjct: 126 SWDRPDSFMLGALVAGCSRARHVDAGVQVHACVAKFGVDEDESVAAALVDMYAKCGWVDS 185

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNN----YPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           S   F+       +SW T M  CL N     Y +  +L F++M        NV+ S  + 
Sbjct: 186 SWRAFTLAPQRSVLSW-TSMIACLVNQGSSGYHDAAMLLFKKMLALKVWPTNVTFSCILK 244

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-- 240
                  LS G  IH   +K+G E     ++ ++L++MY +CG ++   R    + C+  
Sbjct: 245 VFNTPDLLSVGMQIHGCLLKIGTEVD--TALGSALMTMYGRCGGVDEIAR----LACRIR 298

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            DV S  +++  +A NG   EA  +  EM ++ ++  D + +  L+ +C+    LR  R 
Sbjct: 299 HDVFSRTSLLGAYARNGYNAEAIGVFKEM-ILTNMAIDQSAMTCLLQVCSSVGQLRMVRE 357

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
           VH YA++     D L++N+++  Y +    + AE +FN +    D++SW ++++     G
Sbjct: 358 VHCYALKTFFKLDTLLLNAIITVYGRCGDTTSAETVFNLMEE-QDIISWTALLTCYAQNG 416

Query: 355 L-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
           L       F+EML          + ++L +C+   +L  G  IH   +KLG  ++    N
Sbjct: 417 LDEEVLLFFREMLRRGLGSPVFCMTSVLRACSRTSNLAIGLQIHSRTVKLGIDDDNSVEN 476

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ +Y NCG +  A  +   +S N D   WN ++ + +Q+G+   AI+ F  M Q++  
Sbjct: 477 ALVTLYANCGSVQVALKIFNSMS-NRDIVTWNALLTSFSQHGNEVAAIQLFDLM-QEEEV 534

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD  T V ++S+C  + L  EG       +K+   L+ ++ +                 
Sbjct: 535 CPDDYTFVGLLSSCSRMGLVKEGCEYFN-EMKAKYNLEPKMVH----------------- 576

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       + CM+  F++      A++    + +EP++I   ++L++C   G L  
Sbjct: 577 ------------YTCMVDLFARAGRFCDAMDFIDAMPYEPDQILWEALLASCKIHGNLGL 624

Query: 588 GK 589
           G+
Sbjct: 625 GR 626


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 171/525 (32%), Positives = 272/525 (51%), Gaps = 44/525 (8%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GR++H +AI   L  DL +  +L+D Y K   L  A  +F A  P  DLV+WN+M++G  
Sbjct: 29  GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF-ATMPARDLVAWNAMLAGYA 87

Query: 357 KEMLY-------LCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
              +Y       L  Q          STL+A+LP      +L  G S+H + ++     N
Sbjct: 88  HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPN 147

Query: 403 -------TIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
                  T GV    AL+ MY  CG L+ A  +   +   ++ + W+ +I          
Sbjct: 148 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT-WSALIGGFVLCSRMT 206

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +A   FK+M  Q        ++ + + AC +L+    G+ LH L  KS +  D    N+L
Sbjct: 207 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 266

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNE 569
           ++MY +   I  A  +F+     +  +++ ++S + QN     A  +F+ ++    EP+ 
Sbjct: 267 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 326

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
            ++VS++ AC+ L  L+HG+  HG V   G    + I +AL+DMY+ C            
Sbjct: 327 ATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNM 386

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              +   +W++MI+ YG HG G EA  LF EM N G  P   + I LLSACSHSGLV EG
Sbjct: 387 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
             +++ M   Y + P  EH++C+VD+L R G L EAYEFI+++P++    VW A+L AC 
Sbjct: 447 KHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 506

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            + +  +GK+V+ ++ +L PE  G ++ LSN+Y A GR+ +A E+
Sbjct: 507 VYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 551



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 244/522 (46%), Gaps = 45/522 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HF 60
           G  A L  ST+LL  Y   +    +  +F     +D+V WNAM+     +      + H 
Sbjct: 40  GLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL 99

Query: 61  FG-EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS---------- 109
              +M    +R +++TL+ ++  L Q   L QG  VH   I+A +  + +          
Sbjct: 100 LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVL 159

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L    ++MYAKCG L  +   F  M   + V+W+ ++ G +  +   +  L F+ M   G
Sbjct: 160 LGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQG 219

Query: 170 E-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
                  S++SA+ A A L  L  G+ +HAL  K G      ++  NSL+SMY++ G I+
Sbjct: 220 LCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHAD--LTAGNSLLSMYAKAGLID 277

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A   F  M  KD VS++A++ G+  NG+ EEAF +  +MQ   +VEPD AT+V+LI  C
Sbjct: 278 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPAC 336

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +    L+ GR  HG  I R L  +  + N+L+D Y+K   +  +  +FN + P  D+VSW
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFN-MMPSRDIVSW 395

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N+MI+G            LF EM  L       T + +L +C+    +  GK    W   
Sbjct: 396 NTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH---WFHV 452

Query: 397 LGFSNNTIGVNALMHMYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNG 449
           +G   +  G+   M  YI   DL++       A+  +Q +   +D   W  ++ AC    
Sbjct: 453 MG---HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYK 509

Query: 450 HFQEAIKTFKSMTQQ--QNASPDSVTLVNVISACGNLELAFE 489
           +     K    M Q+     + + V L N+ SA G  + A E
Sbjct: 510 NIDLG-KKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 550



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 204/433 (47%), Gaps = 28/433 (6%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           SAL   +C   GR +H  +I AG+ AD  +    ++MY KC  L  +   F+ M   D V
Sbjct: 21  SALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 77

Query: 141 SWNTIMSGCLHNNYPEKCLLYF--REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +WN +++G  H+      + +    +M     + +  +L + +   A  G L+ G  +HA
Sbjct: 78  AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 137

Query: 199 LGIKLGYED--------SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             I+             +  V +  +L+ MY++CG +  A R F  M  ++ V+W+A+I 
Sbjct: 138 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 197

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF L  +  +AF L   M           ++ + +  CA    LR G  +H    +  + 
Sbjct: 198 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVH 257

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            DL   NSL+  Y+K+  + +A  LF+ +A + D VS+++++SG            +FK+
Sbjct: 258 ADLTAGNSLLSMYAKAGLIDQAIALFDEMA-VKDTVSYSALVSGYVQNGRAEEAFLVFKK 316

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     +   +T+++++P+C+   +L+ G+  H   +  G ++ T   NAL+ MY  CG 
Sbjct: 317 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 376

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  +  +   +  + D   WN +I     +G  +EA   F  M       PD VT + ++
Sbjct: 377 IDLSRQVFNMMP-SRDIVSWNTMIAGYGIHGLGKEATALFLEMN-NLGFPPDGVTFICLL 434

Query: 479 SACGNLELAFEGK 491
           SAC +  L  EGK
Sbjct: 435 SACSHSGLVIEGK 447


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 292/566 (51%), Gaps = 52/566 (9%)

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           +EA  +L E + ++S     A  V L+  C +   L   R+VHG+  +   G D+ +  S
Sbjct: 64  QEAMTMLTEGKAVQS-----AMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATS 118

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++ Y +  +   A  LF+ + P  ++V+W ++++G            +F EML +    
Sbjct: 119 LVNAYMRCGAARDARRLFDGM-PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  TL A L +C +   ++ GK +H + +K G  + T   N+L  +Y   G L +A    
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAF 237

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQE-AIKTFKSMTQQQNASPDSVTLVNVISACG-NL 484
            RI    +   W  +I AC ++    E  +  F  M       P+  TL +V+S CG  L
Sbjct: 238 WRIPEK-NVITWTTMISACAEDEECVELGLSLFIDMLMD-GVMPNEFTLTSVMSLCGTRL 295

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +L   GK +   + K     +  V+N+ + +Y R  +   A  +FE   + ++ TWN MI
Sbjct: 296 DLNL-GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMI 354

Query: 545 SAFSQ------NKAEVR-----ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
           S ++Q      +  + R     AL +FR L+    +P+  +  SILS C+ +  L  G+Q
Sbjct: 355 SGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ 414

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH      GF  +  ++SAL++MY+ C               ++   W+SMIS Y  HG+
Sbjct: 415 IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ 474

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             EAI+LF EM  +G+RP + + +SLLSACS++GLV+E   Y++ M +EY + P  +H+ 
Sbjct: 475 PQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++DM  R G++++A+ FIK    +P   +W ++++ C  HG+ ++    A+ L +L+P+
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 594

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
            +  YI L NMY++  RW+D   + K
Sbjct: 595 GIETYILLLNMYISTERWQDVARVRK 620



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 239/546 (43%), Gaps = 64/546 (11%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+ EG    S   + ++    +M  L   R VH    K G  AD  +    VN Y +CG 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F GM   + V+W  +++G   N+ P   L  F EM   G    + +L + +  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL-- 186

Query: 184 SACLG--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ACL   ++  GK +H   IK G E     S+ NSL S+Y++ G +++A RAFW +  K+
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAES--ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 244

Query: 242 VVSWNAIIDGFALNGK-FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           V++W  +I   A + +  E    L  +M LM  V P+  T+ +++SLC   L L  G+ V
Sbjct: 245 VITWTTMISACAEDEECVELGLSLFIDM-LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 303

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
             ++ +     +L + NS M  Y +     +A  LF  +   + +++WN+MISG      
Sbjct: 304 QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS-IITWNAMISGYAQIMD 362

Query: 355 -----------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
                            +F+++     +    T  +IL  C++  +LE G+ IH   +K 
Sbjct: 363 SAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS 422

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF ++ +  +AL++MY  CG +  A      +   +  + W  +I   +Q+G  QEAI+ 
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSMISGYSQHGQPQEAIQL 481

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M +     P+ +T V+++SAC    L  E +    +  K                  
Sbjct: 482 FEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK------------------ 522

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                       E C    +  + CMI  F +      A    +   FEPNE    S+++
Sbjct: 523 ------------EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 570

Query: 578 ACTQLG 583
            C   G
Sbjct: 571 GCRSHG 576



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 229/488 (46%), Gaps = 49/488 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  +TSL+ AY        +  LF     ++VVTW A++T    N    +GL  F
Sbjct: 108 GAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVF 167

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+E G      TL   ++A      +  G+ VH  +IK G  + +S+ N   ++YAK 
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC----LLYFREMGWSGEQADNVSL 177
           G L+S+   F  +   + ++W T++S C  +   E+C    L  F +M   G   +  +L
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAED---EECVELGLSLFIDMLMDGVMPNEFTL 284

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S ++      +L+ GK + A   K+G E +  + V NS + +Y + G+ + A R F  M
Sbjct: 285 TSVMSLCGTRLDLNLGKQVQAFSFKIGCETN--LPVKNSTMYLYLRKGETDEAMRLFEQM 342

Query: 238 TCKDVVSWNAIIDGFA-----------LNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLI 285
               +++WNA+I G+A              +  +A  +  +++  RSV +PD+ T  +++
Sbjct: 343 EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK--RSVMKPDLFTFSSIL 400

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           S+C+  + L +G  +H   I+     D+++ ++L++ Y+K   +  A   F  + P    
Sbjct: 401 SVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM-PTRTF 459

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN-------SPESLEF 386
           V+W SMISG            LF+EM     + +  T +++L +C+       +    + 
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
            K  +C +  +           ++ M++  G +  AFS ++R     + + W+ ++  C 
Sbjct: 520 MKKEYCIEPVVDH------YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 447 QNGHFQEA 454
            +G+ + A
Sbjct: 574 SHGNMELA 581



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 19/272 (6%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE-----------NRCV 54
           +LP   S +  Y      + ++ LF +  +  ++TWNAMI+   +               
Sbjct: 315 NLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRG 374

Query: 55  VMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
              L  F ++    ++ D  T   I+S  + M  L+QG  +H  +IK+G ++D  + +  
Sbjct: 375 FQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 434

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           VNMY KCG +  +   F  M     V+W +++SG   +  P++ +  F EM  +G + + 
Sbjct: 435 VNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE 494

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA---- 230
           ++  S ++A +  G +   +    + +K  Y   P V     +I M+ + G +E A    
Sbjct: 495 ITFVSLLSACSYAGLVEEAEHYFDM-MKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFI 553

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           +R   G    + + W++++ G   +G  E AF
Sbjct: 554 KRT--GFEPNEAI-WSSLVAGCRSHGNMELAF 582


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 185/646 (28%), Positives = 309/646 (47%), Gaps = 43/646 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           G   D+ +LS  + A   + +   G+ +H L +K G+ D   VS   SL+ MY +CG + 
Sbjct: 94  GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGH-DRGEVSAGTSLVDMYMKCGSVC 152

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
                F GM  K+VV+W +++ G A      E   L   M+    + P+  T  +++S  
Sbjct: 153 EGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMR-AEGIWPNPFTFASVLSAV 211

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           A    L  G+ VH  +++      + + NSLM+ Y+K   +  A+ +FN +    D+VSW
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWME-TRDMVSW 270

Query: 349 NSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           N++++GL            F E      + + ST   ++  C + + L   + +H   LK
Sbjct: 271 NTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK 330

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF      + AL   Y  CG+L  A ++    + + +   W  +I  C QNG    A+ 
Sbjct: 331 HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVV 390

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            F  M ++    P+  T   ++ A     L+     +H   +K+       V  AL+  Y
Sbjct: 391 LFSRM-REDRVMPNEFTYSAMLKA----SLSILPPQIHAQVIKTNYQHIPFVGTALLASY 445

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
            +    + A ++F+     ++  W+ M+S  +Q      A  LF  +  +   PNE +I 
Sbjct: 446 SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505

Query: 574 SILSACT--QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN----------- 620
           S++ AC     GV   G+Q H       + +   +SSAL+ MYS  K N           
Sbjct: 506 SVIDACACPSAGV-DQGRQFHAISIKYRYHDAICVSSALVSMYSR-KGNIDSAQIVFERQ 563

Query: 621 -----AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
                 +W+SMIS Y  HG   +AIE F +M  SGI+    + ++++  C+H+GLV EG 
Sbjct: 564 TDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQ 623

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           QY+++M+ ++ + P  EH+ C+VD+  R+GKL E    I+++P      VW  +L AC  
Sbjct: 624 QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRV 683

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           H + ++GK  A+ L  LEP +   Y+ LSN+Y A G+WK+  E+ K
Sbjct: 684 HKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRK 729



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 308/675 (45%), Gaps = 66/675 (9%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNS 126
           G+  DS TL  ++ A   +     G  +HCL +K G    + S     V+MY KCG +  
Sbjct: 94  GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
               F GM   + V+W ++++GC H     + +  F  M   G   +  + +S ++A A 
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G L  G+ +HA  +K G   S  V V NSL++MY++CG +E A+  F  M  +D+VSWN
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSS--VFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            ++ G  LN    EA  L HE +     +   +T  T+I LCA+   L   R +H   ++
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMG-KMTQSTYATVIKLCANLKQLALARQLHSCVLK 330

Query: 307 RLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
              G+ L   +M +L D YSK   L+ A  +F+      ++VSW ++ISG          
Sbjct: 331 H--GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388

Query: 355 --LFKEM---LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             LF  M     + ++F++S +L    S   P+       IH   +K  + +      AL
Sbjct: 389 VVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ-------IHAQVIKTNYQHIPFVGTAL 441

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y   G    A S+ + I    D   W+ ++    Q G  + A   F  M   Q   P
Sbjct: 442 LASYSKFGSTEDALSIFKMIEQK-DVVAWSAMLSCHAQAGDCEGATYLFNKMA-IQGIKP 499

Query: 470 DSVTLVNVISACGNLELAF-EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           +  T+ +VI AC        +G+  H +++K        V +AL++MY R  +I SA  V
Sbjct: 500 NEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIV 559

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           FE   + +L +WN MIS ++Q+   ++A+E FR +E    + + ++ ++++  CT  G++
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLV 619

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G+Q              +  S + D   N  +   ++ M+  Y   GK  E + L  +
Sbjct: 620 VEGQQ--------------YFDSMVRDHKIN-PTMEHYACMVDLYSRAGKLDETMSLIRD 664

Query: 646 MCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNM--LEEYDVRPETEHHVCIVDM 700
           M      P  +  +   +LL AC     V+ G    + +  LE +D    +  +V + ++
Sbjct: 665 M------PFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHD----SSTYVLLSNI 714

Query: 701 LGRSGKLQEAYEFIK 715
              +GK +E  E  K
Sbjct: 715 YAAAGKWKERDEVRK 729



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 268/584 (45%), Gaps = 27/584 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y         + +F     K+VVTW +++T C   +     +  F  M  EGI 
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   ++SA+     L  G+ VH  S+K G  +   +CN  +NMYAKCG +  ++  
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ M   D VSWNT+M+G   N    + L  F E   +  +    + ++ +   A L +L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
           +  + +H+  +K G+  +   +V  +L   YS+CG++  A   F   T  ++VVSW AII
Sbjct: 319 ALARQLHSCVLKHGFHLTG--NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAII 376

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G   NG    A  L   M+  R V P+  T   ++   + S+L  +   +H   I+   
Sbjct: 377 SGCIQNGDIPLAVVLFSRMREDR-VMPNEFTYSAMLK-ASLSILPPQ---IHAQVIKTNY 431

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
            +   +  +L+  YSK  S   A  +F  I    D+V+W++M+S             LF 
Sbjct: 432 QHIPFVGTALLASYSKFGSTEDALSIFKMIE-QKDVVAWSAMLSCHAQAGDCEGATYLFN 490

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +M     + +  T+ +++ +C  P + ++ G+  H   +K  + +     +AL+ MY   
Sbjct: 491 KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRK 550

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++ +A  + +R + + D   WN +I    Q+G+  +AI+TF+ M +      D VT + 
Sbjct: 551 GNIDSAQIVFERQT-DRDLVSWNSMISGYAQHGYSMKAIETFRQM-EASGIQMDGVTFLA 608

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDI-KSASTVFESCYN 534
           VI  C +  L  EG+      ++      T    A ++ +Y R   + ++ S + +  + 
Sbjct: 609 VIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFP 668

Query: 535 CNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
                W  ++ A   +K  E+      + L  EP++ S   +LS
Sbjct: 669 AGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLS 712



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/357 (21%), Positives = 143/357 (40%), Gaps = 47/357 (13%)

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           D   A   L  I         N V+    + G   E +  F S+ ++     DS TL  V
Sbjct: 47  DPPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQF-SVARRGGVLVDSATLSCV 105

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLD---TRVQNALITMYGRCRDIKSASTVFESCYN 534
           + AC ++     G+ LH L +K   G D        +L+ MY +C  +     VFE    
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKC--GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK 163

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQI 591
            N+ TW  +++  +  +     + LF  +  E   PN  +  S+LSA    G L  G+++
Sbjct: 164 KNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRV 223

Query: 592 HGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKG 636
           H      G + + F+ ++L++MY+ C               +   +W+++++    +   
Sbjct: 224 HAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECE 283

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACS-----------HSGLVDEGLQYYNNMLEEY 685
            EA++LFHE   +  + T+S+  +++  C+           HS ++  G     N++   
Sbjct: 284 LEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--- 340

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
                      + D   + G+L +A               W A++S C  +GD  + 
Sbjct: 341 ---------TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLA 388



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S++L++ YS     +S+  +F    ++D+V+WN+MI+   ++   +  +  F +M   G
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG 598

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV------FVNMYAKCG 122
           I+ D  T L ++     M C   G VV        M+ D  +          V++Y++ G
Sbjct: 599 IQMDGVTFLAVI-----MGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653

Query: 123 DLNSSECTFSGMH-CADTVSWNTIMSGC-LHNN 153
            L+ +      M   A  + W T++  C +H N
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACRVHKN 686


>gi|302818178|ref|XP_002990763.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
 gi|300141501|gb|EFJ08212.1| hypothetical protein SELMODRAFT_132289 [Selaginella moellendorffii]
          Length = 661

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 198/658 (30%), Positives = 321/658 (48%), Gaps = 63/658 (9%)

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS-VTNSLISMYSQCGD 226
           SG  A+  + +  + A A L  LS G+ IHA  +          + V N LI+MY +CG 
Sbjct: 8   SGVAAEASTYARLLQACARLKALSQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGR 67

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           +E A   F  M   ++VSWN II   A  G    A  +   MQL  SV PD  +  ++ +
Sbjct: 68  VEEARAVFASMEHPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVPDRVSFTSVAN 127

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP-MNDL 345
            C  +   RE R +H     R    D+++  +L+  Y +  SL +A   F+A+AP   ++
Sbjct: 128 ACGSA---REARIIHASVAARGFLDDVIVCTALITAYCRCGSLGEARATFDAMAPRARNV 184

Query: 346 VSWNSMI-----SGLFKEMLYL-----------CSQFSFS----TLLAILPSCNSPESLE 385
           V+W ++I     SG  +E L L              +S +    T++ ++  C    +L+
Sbjct: 185 VTWTALIAGYAQSGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFAALD 244

Query: 386 FGKSIH--CWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
            GK+IH  C        ++ + +  +L+ MY  CG +  A  +   ++  ++ S WN ++
Sbjct: 245 QGKAIHDRCIHAA-AIRDDPVQIGTSLVTMYAKCGSIEDARLVFDSMAERNEVS-WNAML 302

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG---LALK 499
              +Q+GH  + +  F++M Q     P++VTL+ V++AC +L    +   +HG   L  +
Sbjct: 303 SGYSQHGHGAQLLHLFRAMLQG-GVQPNAVTLLPVVNACSSLAQLRQADDIHGRIVLQSR 361

Query: 500 SLMGLDTR----VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
               L  R    V  AL +MY RC  I  A+ VF      N+ +WN MI A++Q+     
Sbjct: 362 DTPALSLRTNAVVGCALCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRGRL 421

Query: 556 ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL +F  ++    +P+ I+++S+L AC   G  R G Q+HG    L  + ++ + +A ++
Sbjct: 422 ALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLR-SAALDNAAVN 480

Query: 613 MYSNCKSNAA-----------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           MY+     AA                 WS+M++AY   G   EA  LFH M   G+RP  
Sbjct: 481 MYAKSGRVAAAREVFEAMDSQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNH 540

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            ++IS+L ACSH+G++  G   + +M  +Y V P  EH  C+VDMLGR+G +++A+  ++
Sbjct: 541 VTLISILGACSHAGMLQAGCSCFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQ 600

Query: 716 N---LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVA 769
                        W A+L ACS  GDT  G  VA  L    P+     Y++LSN  +A
Sbjct: 601 RSGAGGGGGDAQAWMAVLGACSQQGDTLRGTCVASSLIARHPQAAAAAYVALSNSKLA 658



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 274/562 (48%), Gaps = 48/562 (8%)

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC--LSIKAGMIADSSLC-NVFVNMYAKCG 122
             G+  +++T   ++ A  ++  L QG+ +H   LS  +   + S+L  N  +NMY KCG
Sbjct: 7   RSGVAAEASTYARLLQACARLKALSQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCG 66

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAV 181
            +  +   F+ M   + VSWNTI++           L  FR M        D VS +S  
Sbjct: 67  RVEEARAVFASMEHPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVPDRVSFTS-- 124

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT--C 239
            A+AC G     ++IHA     G+ D   V V  +LI+ Y +CG +  A   F  M    
Sbjct: 125 VANAC-GSAREARIIHASVAARGFLDD--VIVCTALITAYCRCGSLGEARATFDAMAPRA 181

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-------SVEPDIATVVTLISLCADSL 292
           ++VV+W A+I G+A +G  EEA DL   M           SV P+  T+VT+++LCA+  
Sbjct: 182 RNVVTWTALIAGYAQSGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFA 241

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
            L +G+++H   I      D  + +  SL+  Y+K  S+  A L+F+++A  N+ VSWN+
Sbjct: 242 ALDQGKAIHDRCIHAAAIRDDPVQIGTSLVTMYAKCGSIEDARLVFDSMAERNE-VSWNA 300

Query: 351 MISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--- 395
           M+SG            LF+ ML    Q +  TLL ++ +C+S   L     IH   +   
Sbjct: 301 MLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLAQLRQADDIHGRIVLQS 360

Query: 396 ----KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
                L    N +   AL  MY  CG +  A ++   +   +  S WN +I A  Q+G  
Sbjct: 361 RDTPALSLRTNAVVGCALCSMYARCGSIDEAAAVFAGMEQRNVVS-WNAMIGAYAQHGRG 419

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
           + A+  F  M QQ    PD++TL++V+ AC     A  G  +HG +L+ L      + NA
Sbjct: 420 RLALAVFGGM-QQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQ-LQLRSAALDNA 477

Query: 512 LITMYGRCRDIKSASTVFES--CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE--- 566
            + MY +   + +A  VFE+       + +W+ M++A++       A  LF  ++ E   
Sbjct: 478 AVNMYAKSGRVAAAREVFEAMDSQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVR 537

Query: 567 PNEISIVSILSACTQLGVLRHG 588
           PN ++++SIL AC+  G+L+ G
Sbjct: 538 PNHVTLISILGACSHAGMLQAG 559



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 225/484 (46%), Gaps = 38/484 (7%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK--DVVTWNAMITACVENRCVVMGL 58
           RGFL  +   T+L+TAY        + A F     +  +VVTW A+I    ++  +   L
Sbjct: 145 RGFLDDVIVCTALITAYCRCGSLGEARATFDAMAPRARNVVTWTALIAGYAQSGHLEEAL 204

Query: 59  HFFGEMVEE--------GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-- 108
             F  M E          +  ++ T++ +V+   +   L QG+ +H   I A  I D   
Sbjct: 205 DLFWSMAEHDGGGGETWSVAPNAVTIVTVVNLCAEFAALDQGKAIHDRCIHAAAIRDDPV 264

Query: 109 SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS 168
            +    V MYAKCG +  +   F  M   + VSWN ++SG   + +  + L  FR M   
Sbjct: 265 QIGTSLVTMYAKCGSIEDARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQG 324

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV-TNSLI-----SMYS 222
           G Q + V+L   V A + L +L     IH   I L   D+P +S+ TN+++     SMY+
Sbjct: 325 GVQPNAVTLLPVVNACSSLAQLRQADDIHGR-IVLQSRDTPALSLRTNAVVGCALCSMYA 383

Query: 223 QCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
           +CG I+ A   F GM  ++VVSWNA+I  +A +G+   A  +   MQ    V+PD  T++
Sbjct: 384 RCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRGRLALAVFGGMQ-QHGVKPDAITLI 442

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI-AP 341
           +++  CA +   R G  VHG++++  L     + N+ ++ Y+KS  ++ A  +F A+ + 
Sbjct: 443 SVLDACAGAGDARRGSQVHGWSLQLQL-RSAALDNAAVNMYAKSGRVAAAREVFEAMDSQ 501

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
              ++SW++M++             LF  M     + +  TL++IL +C+    L+ G S
Sbjct: 502 RRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRPNHVTLISILGACSHAGMLQAGCS 561

Query: 390 -IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR---ISHNSDTSCWNIVIVAC 445
                    G          ++ M    G +  A  L+QR        D   W  V+ AC
Sbjct: 562 CFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRLVQRSGAGGGGGDAQAWMAVLGAC 621

Query: 446 TQNG 449
           +Q G
Sbjct: 622 SQQG 625



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 224/501 (44%), Gaps = 40/501 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L+  Y      E + A+F    + ++V+WN +I A          L  F  M +E  +  
Sbjct: 58  LINMYGKCGRVEEARAVFASMEHPNLVSWNTIIAAHAAAGDGRGALAVFRAMQLEASVVP 117

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  +   + +A       ++ R++H      G + D  +C   +  Y +CG L  +  TF
Sbjct: 118 DRVSFTSVANAC---GSAREARIIHASVAARGFLDDVIVCTALITAYCRCGSLGEARATF 174

Query: 132 SGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREM----GWSGE----QADNVSLSSAV 181
             M     + V+W  +++G   + + E+ L  F  M    G  GE      + V++ + V
Sbjct: 175 DAMAPRARNVVTWTALIAGYAQSGHLEEALDLFWSMAEHDGGGGETWSVAPNAVTIVTVV 234

Query: 182 AASACLGELSYGKVIHALGI-KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              A    L  GK IH   I      D P V +  SL++MY++CG IE A   F  M  +
Sbjct: 235 NLCAEFAALDQGKAIHDRCIHAAAIRDDP-VQIGTSLVTMYAKCGSIEDARLVFDSMAER 293

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + VSWNA++ G++ +G   +   L   M L   V+P+  T++ +++ C+    LR+   +
Sbjct: 294 NEVSWNAMLSGYSQHGHGAQLLHLFRAM-LQGGVQPNAVTLLPVVNACSSLAQLRQADDI 352

Query: 301 HGYAIRRLLGYDLLMMNS-------LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           HG  + +      L + +       L   Y++  S+ +A  +F  +   N +VSWN+MI 
Sbjct: 353 HGRIVLQSRDTPALSLRTNAVVGCALCSMYARCGSIDEAAAVFAGMEQRN-VVSWNAMIG 411

Query: 354 ------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        +F  M     +    TL+++L +C        G  +H W L+L   +
Sbjct: 412 AYAQHGRGRLALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLRS 471

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
             +  NA ++MY   G + AA  + + + S       W+ ++ A    GH +EA + F +
Sbjct: 472 AALD-NAAVNMYAKSGRVAAAREVFEAMDSQRRTIMSWSAMVAAYAGVGHAEEAFRLFHA 530

Query: 461 MTQQQNASPDSVTLVNVISAC 481
           M Q++   P+ VTL++++ AC
Sbjct: 531 M-QREGVRPNHVTLISILGAC 550


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 183/638 (28%), Positives = 321/638 (50%), Gaps = 42/638 (6%)

Query: 167  WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
            W G   D+ + +  +      G+   G+ +H   ++ G      +   N L++MY++ G 
Sbjct: 423  WPG--VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGP 480

Query: 227  IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-RSVEPDIATVVTLI 285
              +A R F G+  +++VS+  ++ G AL G+FEEA  L   ++     V   + T V  +
Sbjct: 481  FGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKL 540

Query: 286  SLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
             +  D+L L  G  VH  A +  LG+D    + ++L+D YS    +S A  +F+ I    
Sbjct: 541  VVAMDTLGLAWG--VHACACK--LGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIV-GK 595

Query: 344  DLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
            D V+W +M+S             +F +M    S+ +   L ++L +     S+  GK IH
Sbjct: 596  DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH 655

Query: 392  CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
               +K  +        AL+ MY  CG++  A    + ++ N D   W+++I    Q    
Sbjct: 656  ACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVT-NDDVILWSLMISRYAQCNQN 714

Query: 452  QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            ++A + F  M  + + SP+  +L +V+ AC N+ L   GK +H  A+K     +  V NA
Sbjct: 715  EQAFELFIRM-MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNA 773

Query: 512  LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPN 568
            LI +Y +C D++S+  +F S  + N  +WN +I  +S++     AL +FR +        
Sbjct: 774  LIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPST 833

Query: 569  EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK---------- 618
            +++  S+L AC     + H  Q+H  +    F  ++ +S++L+D Y+ C           
Sbjct: 834  QVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFE 893

Query: 619  -----SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
                    +W+++IS Y  HG+   A ELF  M  + I+    + ++LLS C  +GLV +
Sbjct: 894  TLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQ 953

Query: 674  GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
            GL  +++M  ++ + P  EH+ CIV +LGR+G+L +A  FI ++P  P   VW A+LS+C
Sbjct: 954  GLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSC 1013

Query: 734  SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
              H + ++G+  AE + ++EP++   Y+ LSNMY A G
Sbjct: 1014 IVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAG 1051



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/659 (25%), Positives = 312/659 (47%), Gaps = 52/659 (7%)

Query: 90   KQGRVVHCLSIKAGMIADSSL--CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            + GR VH   +++G +A   L   NV +NMY K G   S+   F G+   + VS+ T++ 
Sbjct: 445  RGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQ 504

Query: 148  G-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
            G  L   + E   L F+ + W G + +   L++ +     +  L     +HA   KLG++
Sbjct: 505  GHALRGEFEEASAL-FQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHD 563

Query: 207  DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
             + +V   ++LI  YS CG +  A R F G+  KD V+W A++  ++ N   E    +  
Sbjct: 564  RNAFVG--SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFS 621

Query: 267  EMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            +M++  S + P   T V   ++C  S++L  G+ +H  +++ L   +  +  +L+D Y+K
Sbjct: 622  KMRVAVSKLNPFALTSVLRAAVCLSSVVL--GKGIHACSVKTLYDTERHVYGALLDMYAK 679

Query: 326  SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
              ++  A L F  +   +D++ W+ MIS             LF  M+      +  +L +
Sbjct: 680  CGNIEDARLAFEMVT-NDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSS 738

Query: 374  ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
            +L +C +   L+ GK IH   +K+G  +     NAL+ +Y  C D+ ++  +   +   +
Sbjct: 739  VLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVN 798

Query: 434  DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
            + S WN +IV  +++G  + A+  F+ M      S   VT  +V+ AC +         +
Sbjct: 799  EVS-WNTIIVGYSKSGFGEAALSVFREMRAASVPS-TQVTYSSVLRACASTASINHVGQV 856

Query: 494  HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            H L  KS    DT V N+LI  Y +C  I+ A  +FE+   C+L +WN +IS ++ +   
Sbjct: 857  HCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQA 916

Query: 554  VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
              A ELF  +     + N+I+ V++LS C   G++  G               S   S  
Sbjct: 917  AMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGL--------------SLFDSMR 962

Query: 611  LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
            LD +    S   ++ ++   G  G+  +A+    ++ ++   P+     +LLS+C     
Sbjct: 963  LD-HGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSA---PSAMVWRALLSSCIVHKN 1018

Query: 671  VDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPGV 725
            V+ G      +LE   + P+ E  +V + +M   +G L +   F   ++N+ ++ +PG+
Sbjct: 1019 VELGRFSAEKVLE---IEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGL 1074



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 281/594 (47%), Gaps = 49/594 (8%)

Query: 13   LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
            LL  Y+ V  F S+  +F     +++V++  ++               F  +  EG   +
Sbjct: 471  LLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVN 530

Query: 73   STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
               L  ++  +  M+ L     VH  + K G   ++ + +  ++ Y+ CG ++ +   F 
Sbjct: 531  QFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFD 590

Query: 133  GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            G+   D V+W  ++S    N+ PE  L  F +M  +  + +  +L+S + A+ CL  +  
Sbjct: 591  GIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVL 650

Query: 193  GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            GK IHA  +K  Y+   +  V  +L+ MY++CG+IE A  AF  +T  DV+ W+ +I  +
Sbjct: 651  GKGIHACSVKTLYDTERH--VYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRY 708

Query: 253  ALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A   + E+AF+L   +++MR SV P+  ++ +++  CA+  LL  G+ +H +AI+     
Sbjct: 709  AQCNQNEQAFELF--IRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHES 766

Query: 312  DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            +L + N+L+D Y+K + +  +  +F+++  +N+ VSWN++I G            +F+EM
Sbjct: 767  ELFVGNALIDLYAKCSDMESSLEIFSSLRDVNE-VSWNTIIVGYSKSGFGEAALSVFREM 825

Query: 360  LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                   +  T  ++L +C S  S+     +HC   K  F+++TI  N+L+  Y  CG +
Sbjct: 826  RAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCI 885

Query: 420  VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
              A  + + +    D   WN +I     +G    A + F  M++    + D +T V ++S
Sbjct: 886  RDAREIFETLK-ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKAND-ITFVALLS 943

Query: 480  ACGNLELAFEGKSL-------HGLA--------LKSLMGLDTRVQNALITMYGRCRDIKS 524
             CG+  L  +G SL       HG+         +  L+G   R+ +AL    G   DI S
Sbjct: 944  VCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDAL-NFIG---DIPS 999

Query: 525  ASTVFESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
            A +            W  ++S+       E+      + LE EP + +   +LS
Sbjct: 1000 APSAM---------VWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLS 1044



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 231/513 (45%), Gaps = 27/513 (5%)

Query: 11   TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            ++L+ AYS       +  +F     KD V W AM++   EN C    L  F +M     +
Sbjct: 570  SALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSK 629

Query: 71   FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             +   L  ++ A   ++ +  G+ +H  S+K     +  +    ++MYAKCG++  +   
Sbjct: 630  LNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLA 689

Query: 131  FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            F  +   D + W+ ++S     N  E+    F  M  S    +  SLSS + A A +  L
Sbjct: 690  FEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLL 749

Query: 191  SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              GK IH   IK+G+E   +V   N+LI +Y++C D+E++   F  +   + VSWN II 
Sbjct: 750  DLGKQIHNHAIKIGHESELFVG--NALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIV 807

Query: 251  GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            G++ +G  E A  +  EM+   SV     T  +++  CA +  +     VH    +    
Sbjct: 808  GYSKSGFGEAALSVFREMRAA-SVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFN 866

Query: 311  YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------LFKEMLYL 362
             D ++ NSL+D Y+K   +  A  +F  +    DLVSWN++ISG        + +E+  +
Sbjct: 867  SDTIVSNSLIDSYAKCGCIRDAREIFETLKEC-DLVSWNAIISGYAVHGQAAMAQELFDM 925

Query: 363  CSQFSFS----TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
             S+ S      T +A+L  C S   +  G S+    +L  G   +      ++ +    G
Sbjct: 926  MSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAG 985

Query: 418  DLVAAFSLLQRISHNSDTSCWNIVIVAC-----TQNGHFQEAIKTFKSMTQQQNASPDSV 472
             L  A + +  I        W  ++ +C      + G F  A K  +   Q +      V
Sbjct: 986  RLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFS-AEKVLEIEPQDETT---YV 1041

Query: 473  TLVNVISACGNL-ELAFEGKSLHGLALKSLMGL 504
             L N+ SA G+L ++AF  KS+  + ++   GL
Sbjct: 1042 LLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGL 1074



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L    +L+  Y+  S  ESSL +F    + + V+WN +I    ++      L  F
Sbjct: 763 GHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVF 822

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +     T   ++ A      +     VHCL  K+   +D+ + N  ++ YAKC
Sbjct: 823 REMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKC 882

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F  +   D VSWN I+SG   +         F  M  +  +A++++  + +
Sbjct: 883 GCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALL 942

Query: 182 AASACLGELSYG 193
           +     G +S G
Sbjct: 943 SVCGSTGLVSQG 954


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 198/711 (27%), Positives = 339/711 (47%), Gaps = 42/711 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +HC  IK G++ +  LCN  +++Y K   + ++   F  M      +W  ++S    +  
Sbjct: 44  IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQE 103

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               L  F EM  SG   +  + SS + + A LG+LSYG  +H   +K G+E +  V   
Sbjct: 104 FASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVG-- 161

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           +SL  +YS+CG ++ A   F  +   D +SW  +I       K+ EA     EM +   V
Sbjct: 162 SSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEM-IKAGV 220

Query: 275 EPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
            P+  T V L  L A S L L  G+++H   I R +  ++++  SL+ FYS  + +  A 
Sbjct: 221 PPNEFTFVKL--LGASSFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYFYSHFSIMEDAV 278

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
            + N+     D+  W S++SG             F EM  L    +  T  AIL  C++ 
Sbjct: 279 RVLNSTGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAV 337

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG--DLVAAFSLLQRISHNSDTSCWN 439
            SL+ GK IH   +K+GF ++T   NAL+ MY+ C   ++ A+      IS N     W 
Sbjct: 338 RSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISPN--VVSWT 395

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I+    +G  Q+       M +++   P+ VTL  V+ AC  L+       +HG  L+
Sbjct: 396 TLILGLVDHGFEQDCFGLLMEMVKRE-VEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLR 454

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             +  +  V N+L+  Y     +  A  V  S    +  T+  +++ F++      AL +
Sbjct: 455 RHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSV 514

Query: 560 FRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
             H+       +++S+   +SA   LG    GK +H +    GF     + ++L+DMYS 
Sbjct: 515 INHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSK 574

Query: 617 CKS---------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C S                 +W+ ++S     G+   A+  F EM   G  P   + + L
Sbjct: 575 CGSLEDAKKVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLIL 634

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACS   L + GL+Y+ +M   +++ P+ EH+V +V +LGR+G+L+EA   ++ + ++P
Sbjct: 635 LSACSKGRLTEMGLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVETMHLKP 694

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
              ++  +L AC +HG+  +G+ +A     L P +  +YI L+++Y   G+
Sbjct: 695 NAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESGK 745



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 178/726 (24%), Positives = 319/726 (43%), Gaps = 45/726 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L +L    +LL+ Y       ++  LF E   + V  W  MI+A  +++     L  F
Sbjct: 52  GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLF 111

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+  GI  +  T   ++ +   +  L  G  VH   +K G   +S + +   ++Y+KC
Sbjct: 112 EEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKC 171

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   FS +  ADT+SW  ++S  +      + L ++ EM  +G   +  +    +
Sbjct: 172 GKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLL 231

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AS+ LG L +GK IH+  I  G   +  V +  SL+  YS    +E A R       +D
Sbjct: 232 GASSFLG-LEFGKTIHSSIIVRGIPLN--VVLKTSLVYFYSHFSIMEDAVRVLNSTGEQD 288

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  W +++ GF  N + +EA     EM+ +  + P+  T   ++SLC+    L  G+ +H
Sbjct: 289 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLHPNNFTYSAILSLCSAVRSLDLGKQIH 347

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNA-IAPMNDLVSWNSMI------- 352
              I+        + N+L+  Y K S S  +A  +F A I+P  ++VSW ++I       
Sbjct: 348 SQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMISP--NVVSWTTLILGLVDHG 405

Query: 353 -----SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                 GL  EM+    + +F TL  +L +C+  + L     IH + L+       I  N
Sbjct: 406 FEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGN 465

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+  Y + G +  A+++ + +    D   +  ++    + G  + A+     M      
Sbjct: 466 SLVDAYASSGKVDYAWNVTRSMDMR-DNITYTSLVTRFNELGKHEMALSVINHM-YGDGI 523

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D ++L   ISA  NL     GK LH  ++KS       V N+L+ MY +C  ++ A  
Sbjct: 524 RMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKK 583

Query: 528 VFESCYNCNLCTWNCMISAFS---QNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV 584
           VFE     ++ +WN ++S  +   +  + + A E  R    EP+ ++ + +LSAC++   
Sbjct: 584 VFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSK--- 640

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
                   G +  +G +       ++  +++       +  ++   G  G+  EA  +  
Sbjct: 641 --------GRLTEMGLE----YFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVE 688

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
            M    ++P      +LL AC + G +  G    N  L      P    ++ + D+   S
Sbjct: 689 TM---HLKPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDP--AFYILLADLYDES 743

Query: 705 GKLQEA 710
           GK + A
Sbjct: 744 GKPELA 749



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/473 (24%), Positives = 216/473 (45%), Gaps = 43/473 (9%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
           + ++S C +S   R G  +H   I+  L  +L + N+L+  Y K++ +  A  LF+ + P
Sbjct: 27  IRILSFC-ESSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM-P 84

Query: 342 MNDLVSWNSMISG------------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEF 386
              + +W  MIS             LF+EM+      ++F+FS+   ++ SC     L +
Sbjct: 85  QRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSS---VIRSCAGLGDLSY 141

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           G  +H   LK GF  N++  ++L  +Y  CG L  A  L   +  N+DT  W ++I +  
Sbjct: 142 GGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSL-QNADTISWTMMISSLV 200

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
               + EA++ +  M  +    P+  T V ++ A   L L F GK++H   +   + L+ 
Sbjct: 201 GARKWSEALRFYSEMI-KAGVPPNEFTFVKLLGASSFLGLEF-GKTIHSSIIVRGIPLNV 258

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHL 563
            ++ +L+  Y     ++ A  V  S    ++  W  ++S F +N     A+  F   R L
Sbjct: 259 VLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL 318

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN--- 620
              PN  +  +ILS C+ +  L  GKQIH     +GF++++ + +AL+ MY  C ++   
Sbjct: 319 GLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVE 378

Query: 621 -------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                         +W+++I     HG   +   L  EM    + P   ++  +L ACS 
Sbjct: 379 ASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSK 438

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
              +   L+ +  +L  + V  E      +VD    SGK+  A+   +++ ++
Sbjct: 439 LKYLRLVLEIHGYLLRRH-VDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMR 490



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 139/575 (24%), Positives = 246/575 (42%), Gaps = 51/575 (8%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   ++   TSL+  YS+ S  E ++ +   T  +DV  W ++++  V N      +  
Sbjct: 252 RGIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGT 311

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM   G+  ++ T   I+S  + +  L  G+ +H  +IK G    + + N  V+MY K
Sbjct: 312 FLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMK 371

Query: 121 C--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           C   ++ +S   F  M   + VSW T++ G + + + + C     EM     + + V+LS
Sbjct: 372 CSASEVEASRV-FGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLS 430

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             + A + L  L     IH  G  L       + V NSL+  Y+  G ++ A      M 
Sbjct: 431 GVLRACSKLKYLRLVLEIH--GYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMD 488

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D +++ +++  F   GK E A  +++ M     +  D  ++   IS  A+      G+
Sbjct: 489 MRDNITYTSLVTRFNELGKHEMALSVINHM-YGDGIRMDQLSLPGFISASANLGAHETGK 547

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
            +H Y+++      + ++NSL+D YSK  SL  A+ +F  IA M D+VSWN ++SGL   
Sbjct: 548 HLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIA-MPDVVSWNGLVSGLASI 606

Query: 356 ---------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGF 399
                    F+EM    ++    T L +L +C+     E G       K+IH  + ++  
Sbjct: 607 GRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEPQIEH 666

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ--EAIKT 457
             + +G+          G L  A  +++ +    +   +  ++ AC  +G+    E +  
Sbjct: 667 YVHLVGILG------RAGRLEEATGVVETMHLKPNAMIFKTLLRACRYHGNLSLGEDMAN 720

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL---HGLALK-------------SL 501
            K +    +     + L ++    G  ELA + ++L    GL  K             S 
Sbjct: 721 -KGLALAPSDPAFYILLADLYDESGKPELAQKTRNLMSEKGLCKKLSKSTVEVQGKVHSF 779

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           +G D         +Y     IK     F S Y  N
Sbjct: 780 VGEDVITVEKTKRIYAEIESIKEEIKRFGSSYRGN 814


>gi|302800421|ref|XP_002981968.1| hypothetical protein SELMODRAFT_228785 [Selaginella moellendorffii]
 gi|300150410|gb|EFJ17061.1| hypothetical protein SELMODRAFT_228785 [Selaginella moellendorffii]
          Length = 637

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 169/633 (26%), Positives = 318/633 (50%), Gaps = 42/633 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           GE+ + ++  + + A    G+L  G+++H   +  G+ D    ++ N+++ MY + G I 
Sbjct: 5   GERPNAITFLNLIVACGSSGDLKRGRILHDRIVSCGF-DHQLANLGNAIVHMYGRSGSIA 63

Query: 229 AAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            A RAF  +    K V S+N+++  + L G   EA DL  +M       P+  +  T I 
Sbjct: 64  EARRAFLAIPSRLKSVASFNSMLRAYVLAGLQCEAIDLFDQMP--NDPAPNAVSFTTAIG 121

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            C+    + +G ++H       L  D+ +  +L++ Y K      A  +F ++     +V
Sbjct: 122 ACSALGWIEKGAAIHARLAGTGLETDVGLATALVNMYGKRGLFDMATKVFESMTA-KTVV 180

Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +W+++I+             L++ M+   S+ +  T L++L +C++   LE G+ IH   
Sbjct: 181 TWSALIAAYAQHGHAEEAFDLYRRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEI 240

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           + LG   + + +N ++ MYI C  L  A      ++ + D   W  +I A  Q G  + A
Sbjct: 241 VNLGLDRSLVLMNTVLTMYIKCRSLDEAGEFFAAMA-SRDLKSWMFIIAANAQQGRPERA 299

Query: 455 IKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +  F+S+ ++++ +  PD V   +V++AC   + + +G+++H +    L      +  AL
Sbjct: 300 LALFRSLLEERDPTLQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEATAV-IGTAL 358

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PN 568
           +  Y  C D+ +A   F      ++  WN +I A  Q++    ALE+F  +  E    PN
Sbjct: 359 VDFYSNCGDLANAKAAFARIVAKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPN 418

Query: 569 EISIVSILSACTQLGVL-RHGKQIHGHVFHLGFQENSFISSALLDMYSN----------- 616
             + V++L ACT+   L   G++++  +   G++    + + +++M++            
Sbjct: 419 HRTFVALLEACTESPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVF 478

Query: 617 ----CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                K   +W+++I+A+   G   EA EL+  M   G+ P + + IS+LS+C+H+G+VD
Sbjct: 479 ARMPIKDLVSWTAIIAAHTRSGARVEARELYWMMALQGLEPDEVTYISILSSCAHAGMVD 538

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           E   Y+ +M E++ V P  EH+VC++D+LGR+G+L++A E +           W ++L A
Sbjct: 539 EAWSYFVSMSEDFGVEPREEHYVCVIDLLGRAGRLRDAEELVMKTSKLLGAVGWTSVLGA 598

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           C  HGD     QV +   KLEPEN G Y+ L++
Sbjct: 599 CRTHGDLHRANQVVDEAVKLEPENSGAYLLLAH 631



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 262/541 (48%), Gaps = 31/541 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD-SSLCNVFVNMYAKCGDLNS 126
           G R ++ T L ++ A      LK+GR++H   +  G     ++L N  V+MY + G +  
Sbjct: 5   GERPNAITFLNLIVACGSSGDLKRGRILHDRIVSCGFDHQLANLGNAIVHMYGRSGSIAE 64

Query: 127 SECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAA 183
           +   F  +        S+N+++   +      + +  F +M    + A N VS ++A+ A
Sbjct: 65  ARRAFLAIPSRLKSVASFNSMLRAYVLAGLQCEAIDLFDQM--PNDPAPNAVSFTTAIGA 122

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + LG +  G  IHA     G E    V +  +L++MY + G  + A + F  MT K VV
Sbjct: 123 CSALGWIEKGAAIHARLAGTGLETD--VGLATALVNMYGKRGLFDMATKVFESMTAKTVV 180

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W+A+I  +A +G  EEAFDL   M +    +P+  T ++++S C+    L  GR +H  
Sbjct: 181 TWSALIAAYAQHGHAEEAFDLYRRM-MREGSKPNEVTFLSVLSACSTMRWLERGREIHSE 239

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
            +   L   L++MN+++  Y K  SL +A   F A+A   DL SW  +I+          
Sbjct: 240 IVNLGLDRSLVLMNTVLTMYIKCRSLDEAGEFFAAMAS-RDLKSWMFIIAANAQQGRPER 298

Query: 354 --GLFKEMLYLCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
              LF+ +L       Q       ++L +C++ +  + G++IH        +   IG  A
Sbjct: 299 ALALFRSLLEERDPTLQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEATAVIG-TA 357

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+  Y NCGDL  A +   RI    D + WN +I AC Q+  ++EA++ F  M  +  + 
Sbjct: 358 LVDFYSNCGDLANAKAAFARIVAK-DVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSL 416

Query: 469 PDSVTLVNVISACG-NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           P+  T V ++ AC  +  L   G+ L+   + S   L   +   +I M+ +   +  A  
Sbjct: 417 PNHRTFVALLEACTESPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARD 476

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           VF      +L +W  +I+A +++ A V A EL+  +     EP+E++ +SILS+C   G+
Sbjct: 477 VFARMPIKDLVSWTAIIAAHTRSGARVEARELYWMMALQGLEPDEVTYISILSSCAHAGM 536

Query: 585 L 585
           +
Sbjct: 537 V 537



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 230/507 (45%), Gaps = 29/507 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           K V ++N+M+ A V        +  F +M  +    ++ +    + A + +  +++G  +
Sbjct: 77  KSVASFNSMLRAYVLAGLQCEAIDLFDQMPNDPAP-NAVSFTTAIGACSALGWIEKGAAI 135

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H      G+  D  L    VNMY K G  + +   F  M     V+W+ +++    + + 
Sbjct: 136 HARLAGTGLETDVGLATALVNMYGKRGLFDMATKVFESMTAKTVVTWSALIAAYAQHGHA 195

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E+    +R M   G + + V+  S ++A + +  L  G+ IH+  + LG + S  + + N
Sbjct: 196 EEAFDLYRRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEIVNLGLDRS--LVLMN 253

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR--S 273
           ++++MY +C  ++ A   F  M  +D+ SW  II   A  G+ E A  L   +   R  +
Sbjct: 254 TVLTMYIKCRSLDEAGEFFAAMASRDLKSWMFIIAANAQQGRPERALALFRSLLEERDPT 313

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           ++PD     ++++ C+      +GR++H     RL     ++  +L+DFYS    L+ A+
Sbjct: 314 LQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEA-TAVIGTALVDFYSNCGDLANAK 372

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------CSQFSFSTLLAILPSCNS 380
             F  I    D+ +WN++I    +  LY              CS  +  T +A+L +C  
Sbjct: 373 AAFARIVA-KDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTE 431

Query: 381 PESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
             SL   G+ ++   +  G+    +    +++M+   G L  A  +  R+    D   W 
Sbjct: 432 SPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVFARMPIK-DLVSWT 490

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I A T++G   EA +    M   Q   PD VT ++++S+C +  +  E  S + +++ 
Sbjct: 491 AIIAAHTRSGARVEA-RELYWMMALQGLEPDEVTYISILSSCAHAGMVDEAWS-YFVSMS 548

Query: 500 SLMGLDTRVQN-----ALITMYGRCRD 521
              G++ R ++      L+   GR RD
Sbjct: 549 EDFGVEPREEHYVCVIDLLGRAGRLRD 575



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 202/468 (43%), Gaps = 33/468 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y     F+ +  +F     K VVTW+A+I A  ++         +  M+ EG 
Sbjct: 151 ATALVNMYGKRGLFDMATKVFESMTAKTVVTWSALIAAYAQHGHAEEAFDLYRRMMREGS 210

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + +  T L ++SA + M  L++GR +H   +  G+     L N  + MY KC  L+ +  
Sbjct: 211 KPNEVTFLSVLSACSTMRWLERGREIHSEIVNLGLDRSLVLMNTVLTMYIKCRSLDEAGE 270

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLSSAVAASAC 186
            F+ M   D  SW  I++       PE+ L  FR +    +   Q D V  +S + A + 
Sbjct: 271 FFAAMASRDLKSWMFIIAANAQQGRPERALALFRSLLEERDPTLQPDEVIFASVLNACST 330

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
                 G+ IH + I    E +  +    +L+  YS CGD+  A+ AF  +  KDV +WN
Sbjct: 331 KKWSDDGRAIHRI-IPPRLEATAVIG--TALVDFYSNCGDLANAKAAFARIVAKDVAAWN 387

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL-REGRSVHGYAI 305
           AII     +  +EEA ++ + M +     P+  T V L+  C +S  L   GR ++   +
Sbjct: 388 AIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTESPSLGAAGRKLYERIV 447

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEML 360
                  L++   +++ ++K  SL +A  +F A  P+ DLVSW ++I     SG   E  
Sbjct: 448 ASGYELGLVLGTGIINMFAKLGSLDRARDVF-ARMPIKDLVSWTAIIAAHTRSGARVEAR 506

Query: 361 YLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L    +         T ++IL SC        G     W   +  S +  GV      Y
Sbjct: 507 ELYWMMALQGLEPDEVTYISILSSCAHA-----GMVDEAWSYFVSMSED-FGVEPREEHY 560

Query: 414 I-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +         G L  A  L+ + S       W  V+ AC  +G    A
Sbjct: 561 VCVIDLLGRAGRLRDAEELVMKTSKLLGAVGWTSVLGACRTHGDLHRA 608


>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 885

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 203/718 (28%), Positives = 353/718 (49%), Gaps = 52/718 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           FL + PT  S +  Y+N     +S+ + +  C  D       +   +  +          
Sbjct: 21  FLPNRPTYISSMKLYNNFHSSSASVRVRFSGCTADTTQ---EVNKRIPRKLSSPNWSLID 77

Query: 63  EM-VEEGIRFDSTTLLIIVSALTQ----MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           +    E I F S  +L   S + +       L +G  +H   IK+G+  DS L    +N+
Sbjct: 78  KSETNEIISFASKEVLKRYSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINL 137

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKCG L  +     GM   D VSW  +++G +        +  + EM       +  +L
Sbjct: 138 YAKCGSLAFARKVLVGMRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTL 197

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           ++ + AS+   ++ +GK+IH   IK G     +V   ++L+ +Y++ G++E A+R F+GM
Sbjct: 198 ATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVG--SALVDLYAKFGEMELADRVFFGM 255

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K+ VSWNA+++G+A  G  +    L   M L   +     T+ T++  CA+S  LREG
Sbjct: 256 PEKNNVSWNALLNGYAQRGDGKNVLKLFCRM-LECEMNFTNYTLSTVLKGCANSGNLREG 314

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
           +++H  +IRR    D  +  +L+D YSK     +A  +FN I    D+V+W+++I+GL +
Sbjct: 315 KALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEE-PDIVAWSAIITGLDQ 373

Query: 358 --------EMLYLC-------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF-SN 401
                   E+ +L        +QFSF++   ++ +  +   L  G+SIHC   K G+ S+
Sbjct: 374 QGHSQEAAELFHLMRQKGVRPNQFSFAS---VISAATNVGDLYLGQSIHCCICKYGYESD 430

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N++G NAL+ MY+  G +     +   ++ N D   WN ++          + ++ F  M
Sbjct: 431 NSVG-NALITMYMKSGFVQDGIRVFDTMT-NRDLVSWNALLSGFYDFETSDQGLRIFCQM 488

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
              +   P+  T V V+ +C +L   + GK +H   +K+ +  +  V  ALI MY + R 
Sbjct: 489 L-MEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRC 547

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           ++ A   F    N +L TW  +I+  SQ     +A++    +  E   PNE ++ S LS 
Sbjct: 548 LEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSG 607

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C+++  L +G+Q+H      G   + F+SSAL+DMY  C               +   AW
Sbjct: 608 CSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAW 667

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +++I  Y  HG+G +A+E F  M +  I P + + I +L+ACS+ G V+EG ++++ M
Sbjct: 668 NTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEGKKHFDLM 725



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 253/512 (49%), Gaps = 18/512 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  L   ++L+  Y+     E +  +F+    K+ V+WNA++    +       L  F
Sbjct: 224 GLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLF 283

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+E  + F + TL  ++        L++G+ +H LSI+     D  L    V+MY+KC
Sbjct: 284 CRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKC 343

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G    +   F+ +   D V+W+ I++G     + ++    F  M   G + +  S +S +
Sbjct: 344 GMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVI 403

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A+  +G+L  G+ IH    K GYE     SV N+LI+MY + G ++   R F  MT +D
Sbjct: 404 SAATNVGDLYLGQSIHCCICKYGYESDN--SVGNALITMYMKSGFVQDGIRVFDTMTNRD 461

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSWNA++ GF      ++   +  +M LM  + P++ T V ++  C+  L +  G+ VH
Sbjct: 462 LVSWNALLSGFYDFETSDQGLRIFCQM-LMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVH 520

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + I+  L  +  +  +L+D Y+K+  L  A++ FN +    DL +W  +I+G       
Sbjct: 521 AHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTN-RDLFTWTVIIAGHSQTDKA 579

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                   +ML    + +  TL + L  C+   +L  G+ +H   +K G S +    +AL
Sbjct: 580 EKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSAL 639

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A ++ + +  + DT  WN +I   +Q+G  Q+A++ F+ M   ++  P
Sbjct: 640 VDMYGKCGCMEDAEAIFKGL-FSRDTVAWNTIICGYSQHGQGQKALEAFR-MMLDEDIDP 697

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           D VT + V++AC  +    EGK    L  KSL
Sbjct: 698 DEVTFIGVLAACSYMGWVEEGKKHFDLMSKSL 729



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 241/566 (42%), Gaps = 75/566 (13%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           ++  CA    L EG ++HG  I+  L  D  +  SL++ Y+K  SL+ A  +   +    
Sbjct: 99  MLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRE-R 157

Query: 344 DLVSWNSMISGLFKE------MLYLC---------SQFSFSTLLAILPSCNSPESLEFGK 388
           D+VSW ++I+G   E      +   C         ++F+ +T+L     C+    ++FGK
Sbjct: 158 DVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCS---DIKFGK 214

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            IH   +K G   +    +AL+ +Y   G++  A  +   +   ++ S WN ++    Q 
Sbjct: 215 LIHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVS-WNALLNGYAQR 273

Query: 449 GHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           G  +  +K F  M + + N +  + TL  V+  C N     EGK+LH L+++    LD  
Sbjct: 274 GDGKNVLKLFCRMLECEMNFT--NYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEF 331

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLE 564
           +   L+ MY +C     A  VF      ++  W+ +I+   Q      A ELF   R   
Sbjct: 332 LGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKG 391

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
             PN+ S  S++SA T +G L  G+ IH  +   G++ ++ + +AL+ MY          
Sbjct: 392 VRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGI 451

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS--- 666
                   +   +W++++S +       + + +F +M   G+ P   + + +L +CS   
Sbjct: 452 RVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLL 511

Query: 667 --------HSGLVDEGLQ-------------YYNNMLEEYDV------RPETEHHVCIVD 699
                   H+ ++   L                N  LE+ DV        +      I+ 
Sbjct: 512 NVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIA 571

Query: 700 MLGRSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-EPE 755
              ++ K ++A +++  +    I+P      + LS CS       G+Q+  L  K     
Sbjct: 572 GHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSG 631

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
           +V    +L +MY   G  +DA  I K
Sbjct: 632 DVFVSSALVDMYGKCGCMEDAEAIFK 657



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 28/407 (6%)

Query: 347 SWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           +W+ +      E++   S+        +L  C S  +L  G +IH   +K G   ++   
Sbjct: 72  NWSLIDKSETNEIISFASKEVLKRYSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLW 131

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
            +L+++Y  CG L  A  +L  +    D   W  +I      G   + +K +  M +++N
Sbjct: 132 VSLINLYAKCGSLAFARKVLVGM-RERDVVSWTALIAGYVSEGCGSDGVKAYCEM-RKEN 189

Query: 467 ASPDSVTLVNVISA---CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
             P+  TL  V+ A   C +++    GK +H  A+K+ + LD  V +AL+ +Y +  +++
Sbjct: 190 ICPNEFTLATVLKASSMCSDIKF---GKLIHLEAIKTGLLLDLFVGSALVDLYAKFGEME 246

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF-RHLEFEPN--EISIVSILSACT 580
            A  VF      N  +WN +++ ++Q       L+LF R LE E N    ++ ++L  C 
Sbjct: 247 LADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCA 306

Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
             G LR GK +H       ++ + F+   L+DMYS C                   AWS+
Sbjct: 307 NSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSA 366

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           +I+     G   EA ELFH M   G+RP + S  S++SA ++ G +  G Q  +  + +Y
Sbjct: 367 IITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLG-QSIHCCICKY 425

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
               +      ++ M  +SG +Q+       +  +     W A+LS 
Sbjct: 426 GYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVS-WNALLSG 471


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 180/594 (30%), Positives = 296/594 (49%), Gaps = 69/594 (11%)

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S ++   NSLI+ YS+ G IE A   F  M  K+++SWN+I+ G+  N + +EA ++  +
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M      E +  +   L+S   ++ ++ E R V      R+   +++   +++  Y K  
Sbjct: 155 MS-----ERNTISWNGLVSGYINNGMINEAREVFD----RMPERNVVSWTAMVRGYVKEG 205

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKE--MLYLCSQFSFSTLLAILPSCNSPESLE 385
            +S+AE LF  + P  ++VSW  M+ GL +E  +   C  F              PE   
Sbjct: 206 MISEAETLFWQM-PEKNVVSWTVMLGGLLQEGRIDEACRLFDMM-----------PEK-- 251

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                           + +    ++  Y   G LV A  L   +   +  S W  +I   
Sbjct: 252 ----------------DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVS-WTTMITGY 294

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            QN     A K F+ M ++   S     ++   + CG L+ A E    + + +KS++   
Sbjct: 295 VQNQQVDIARKLFEVMPEKNEVS--WTAMLKGYTNCGRLDEASE--LFNAMPIKSVVAC- 349

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
               NA+I  +G+  ++  A  VF+     +  TW+ MI  + +   E+ ALELFR ++ 
Sbjct: 350 ----NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405

Query: 566 E---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
           E   PN  S++S+LS C  L  L HG++IH  +    F  + +++S LL MY  C     
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 465

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                     K    W+S+I+ Y  HG G EA+ +FH+M  SGI P   + + +LSACS+
Sbjct: 466 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           +G V +GL+ +N+M  +Y V  + EH+ C+VD+LGR+GKL EA + I+ +P++    +WG
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 585

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           A+L AC  H    + +  A+ L  LEP+N G +I LSN+Y + GRW D  E+ +
Sbjct: 586 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRR 639



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 246/561 (43%), Gaps = 78/561 (13%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  Y++ G +  +   F  M   + +SWN+I++G   N  P++    F +M     +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + +S +  V+     G ++ G +  A  +     +   VS T +++  Y + G I  AE
Sbjct: 158 RNTISWNGLVS-----GYINNGMINEAREVFDRMPERNVVSWT-AMVRGYVKEGMISEAE 211

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             FW M  K+VVSW  ++ G    G+ +EA  L   M      E D+ T   +I      
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP-----EKDVVTRTNMIGGYCQV 266

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L E R +     RR    +++   +++  Y ++  +  A  LF  + P  + VSW +M
Sbjct: 267 GRLVEARMLFDEMPRR----NVVSWTTMITGYVQNQQVDIARKLFE-VMPEKNEVSWTAM 321

Query: 352 ISGLFKEMLYLCSQFS-FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           + G        C +    S L   +P           KS+             +  NA++
Sbjct: 322 LKGYTN-----CGRLDEASELFNAMPI----------KSV-------------VACNAMI 353

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             +   G++  A  +  ++    D   W+ +I    + G   +A++ F+ M Q++   P+
Sbjct: 354 LCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKGLELDALELFR-MMQREGIRPN 411

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +L++V+S C  L     G+ +H   ++S   LD  V + L++MY +C ++  A  VF+
Sbjct: 412 FPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFD 471

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  WN +I+ ++Q+   V AL +F  + F    P++++ V +LSAC+  G ++ 
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKK 531

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           G +I   +      E  +     ++ Y         + M+   G  GK  EA++L  +M 
Sbjct: 532 GLEIFNSM------ETKYQVEQKIEHY---------ACMVDLLGRAGKLNEAMDLIEKM- 575

Query: 648 NSGIRPTKSSVI---SLLSAC 665
                P ++  I   +LL AC
Sbjct: 576 -----PMEADAIIWGALLGAC 591



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 170/375 (45%), Gaps = 14/375 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T T+++  Y  V     +  LF E   ++VV+W  MIT  V+N+ V +    F  M E+ 
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK- 313

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSS 127
              +  +   ++   T  NC   GR+     +   M   S + CN  +  + + G++  +
Sbjct: 314 ---NEVSWTAMLKGYT--NC---GRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D  +W+ ++            L  FR M   G + +  SL S ++  A L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L +G+ IHA  ++  ++   YV+  + L+SMY +CG++  A++ F     KDVV WN+
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVA--SVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNS 483

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV-HGYAIR 306
           II G+A +G   EA  + H+M     + PD  T V ++S C+ +  +++G  + +    +
Sbjct: 484 IITGYAQHGLGVEALRVFHDMHF-SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
             +   +     ++D   ++  L++A  L   +    D + W +++      M    ++ 
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEV 602

Query: 367 SFSTLLAILPSCNSP 381
           +   LL + P    P
Sbjct: 603 AAKKLLVLEPKNAGP 617



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 84/545 (15%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +  SL+T YS +   E +  +F E  +K++++WN+++    +N+      + F +M E  
Sbjct: 100 SRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER- 158

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              ++ +   +VS       + + R V     +  +++ +++    V  Y K G ++ +E
Sbjct: 159 ---NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAM----VRGYVKEGMISEAE 211

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA-------- 180
             F  M   + VSW  ++ G L     ++    F  M     + D V+ ++         
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTRTNMIGGYCQVG 267

Query: 181 --VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM---------------YSQ 223
             V A     E+    V+    +  GY  +  V +   L  +               Y+ 
Sbjct: 268 RLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN 327

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG---KFEEAFDLLHE------------- 267
           CG ++ A   F  M  K VV+ NA+I  F  NG   K  + FD + E             
Sbjct: 328 CGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY 387

Query: 268 ---------MQLMR-----SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
                    ++L R      + P+  ++++++S+CA    L  GR +H   +R     D+
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF 368
            + + L+  Y K  +L+KA+ +F+  A + D+V WNS+I+     GL  E L +     F
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFA-VKDVVMWNSIITGYAQHGLGVEALRVFHDMHF 506

Query: 369 S-------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           S       T + +L +C+   +++ G  I +  + K            ++ +    G L 
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVI 478
            A  L++++   +D   W  ++ AC  +     A    K +   + +NA P  + L N+ 
Sbjct: 567 EAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP-FILLSNIY 625

Query: 479 SACGN 483
           ++ G 
Sbjct: 626 ASQGR 630



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 187/438 (42%), Gaps = 40/438 (9%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   KD  TW+AMI         +  L  F  M  EGIR +  +L+ ++S    +  
Sbjct: 368 VFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLAN 427

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR +H   +++    D  + +V ++MY KCG+L  ++  F      D V WN+I++G
Sbjct: 428 LDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITG 487

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG-KVIHALGIKLGYED 207
              +    + L  F +M +SG   D+V+    ++A +  G +  G ++ +++  K  Y+ 
Sbjct: 488 YAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK--YQV 545

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLH 266
              +     ++ +  + G +  A      M  + D + W A++     + K + A     
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605

Query: 267 EMQLMRSVEPDIATVVTLIS-------LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           ++ ++   EP  A    L+S          D   LR  R++    + +  G   +++   
Sbjct: 606 KLLVL---EPKNAGPFILLSNIYASQGRWDDVAELR--RNMRDRRVSKYPGCSWIVVEKK 660

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCN 379
           +  ++  +S    E      + +N ++ W   +SGL +E  Y   Q   S +L  +    
Sbjct: 661 VHKFTGGDSSGHPEH-----SEINRILEW---LSGLLREAGYYPDQ---SFVLHDVDEEE 709

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN---CGDLVAAFSLLQRISHNSDTS 436
             +SLE+    H  +L + +    I +   + +  N   CGD  AA  L+ +++      
Sbjct: 710 KVQSLEY----HSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGRE--- 762

Query: 437 CWNIVIVACTQNGHFQEA 454
              I++    +  HF++ 
Sbjct: 763 ---IILRDANRFHHFKDG 777


>gi|413944451|gb|AFW77100.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 678

 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 309/617 (50%), Gaps = 43/617 (6%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +H + IKLG   S ++   N+L+  Y +      A R F  M  +++VSW+ +I G A +
Sbjct: 28  VHGVAIKLGCIVSTFL--CNNLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGSAHH 85

Query: 256 GKFEEAFDL----LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           G   EAF L    LH         PD  T+  L++ C+ +  +  G  VH    +  +  
Sbjct: 86  GVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFGVDE 145

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI--------SG-------LF 356
           D  +  +L+D Y+K   +  +   F  +AP   ++SW SMI        SG       LF
Sbjct: 146 DDSVAAALVDMYAKCGWVDSSWRAFT-LAPQRSVLSWTSMIACLVNQGSSGYYDTSLLLF 204

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           K+ML L    + +T   IL   ++P+ L  G  +H   LK+G   +T    ALM MY  C
Sbjct: 205 KKMLALKVWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMGTEVDTALGTALMTMYGRC 264

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +     L  RI H++ +     ++ A  + G+  EAI  FK M  + N + D   +  
Sbjct: 265 GGVDEIPRLACRIRHDALSR--TALLGAYARTGYNAEAIGVFKEMIMK-NMAIDQSAMTG 321

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++  C +       + +H  ALK+   LDT + NA IT+YGRC DI SA TVF      +
Sbjct: 322 MLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEEND 381

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
           + +W  +++ ++QN  +   L  FR +           I S+L A + +  L  G QIH 
Sbjct: 382 IISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHS 441

Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
               LG  +++ + +AL+ +Y+NC               +    W+++++++  HG    
Sbjct: 442 RTLKLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIVTWNALLTSFSQHGSEVA 501

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           AI+LF  M   GI P   + + LLS+CS  GLV EG +Y+N M E+Y++ P+  H+ C+V
Sbjct: 502 AIQLFDLMQEEGICPDAYTFVGLLSSCSRMGLVKEGCEYFNEMKEKYNLEPKMVHYTCMV 561

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVG 758
           D+L R+G+  +A +FI  +P +P   +W A+L++C  HG+  +G+  A+ + ++ P +  
Sbjct: 562 DLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGLGRIAAKKILEITPHDYS 621

Query: 759 YYISLSNMYVALGRWKD 775
            YI LS+++ ++  W +
Sbjct: 622 AYIILSSIHASVDMWDE 638



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 272/602 (45%), Gaps = 65/602 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--- 68
           +LL AY        +  LF E   +++V+W+ +I+    +  +      F  M+      
Sbjct: 46  NLLYAYLRRQVPADARRLFDEMPRRNLVSWSVVISGSAHHGVLAEAFALFSHMLHGAGHG 105

Query: 69  --IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              R DS TL  +V+  ++   +  G  VH    K G+  D S+    V+MYAKCG ++S
Sbjct: 106 SWDRPDSFTLGALVAGCSRARDVDAGMQVHACVAKFGVDEDDSVAAALVDMYAKCGWVDS 165

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNN----YPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           S   F+       +SW T M  CL N     Y +  LL F++M        N + S  + 
Sbjct: 166 SWRAFTLAPQRSVLSW-TSMIACLVNQGSSGYYDTSLLLFKKMLALKVWPTNATYSCILK 224

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-- 240
                  LS G  +H   +K+G E     ++  +L++MY +CG ++   R    + C+  
Sbjct: 225 VFDTPDLLSVGMQLHGCLLKMGTEVD--TALGTALMTMYGRCGGVDEIPR----LACRIR 278

Query: 241 -DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D +S  A++  +A  G   EA  +  EM +M+++  D + +  ++ +C+    LR  R 
Sbjct: 279 HDALSRTALLGAYARTGYNAEAIGVFKEM-IMKNMAIDQSAMTGMLQVCSSFGQLRMVRQ 337

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
           VH YA++     D L++N+ +  Y +   ++ AE +F  +   ND++SW ++++     G
Sbjct: 338 VHCYALKTFFKLDTLLLNATITVYGRCGDINSAETVFYLMEE-NDIISWTALLTCYTQNG 396

Query: 355 L-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
           L       F++ML          + ++L + +S  +L  G  IH   LKLG  ++    N
Sbjct: 397 LDEEVLLFFRKMLRKGLGSPVFCITSVLRASSSISNLAVGLQIHSRTLKLGIDDDNSVQN 456

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ +Y NCG +  A  +   +S N D   WN ++ + +Q+G    AI+ F  M Q++  
Sbjct: 457 ALVTLYANCGSVQVALKIFNSMS-NRDIVTWNALLTSFSQHGSEVAAIQLFDLM-QEEGI 514

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD+ T V ++S+C  + L  EG       +K    L+ ++ +                 
Sbjct: 515 CPDAYTFVGLLSSCSRMGLVKEGCEYFN-EMKEKYNLEPKMVH----------------- 556

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       + CM+   ++      A++    + +EP++I   ++L++C   G L  
Sbjct: 557 ------------YTCMVDLLARAGRFCDAMDFIDAMPYEPDQILWEALLASCKVHGNLGL 604

Query: 588 GK 589
           G+
Sbjct: 605 GR 606



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 220/503 (43%), Gaps = 57/503 (11%)

Query: 293 LLREG---RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           LLR G    SVHG AI+        + N+L+  Y +    + A  LF+ + P  +LVSW+
Sbjct: 18  LLRSGGNPHSVHGVAIKLGCIVSTFLCNNLLYAYLRRQVPADARRLFDEM-PRRNLVSWS 76

Query: 350 SMISG------------LFKEMLYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIHC 392
            +ISG            LF  ML+     S+      TL A++  C+    ++ G  +H 
Sbjct: 77  VVISGSAHHGVLAEAFALFSHMLHGAGHGSWDRPDSFTLGALVAGCSRARDVDAGMQVHA 136

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVA---AFSLLQRISHNSDTSCWNIVIVACTQN- 448
              K G   +     AL+ MY  CG + +   AF+L  + S  S TS     ++AC  N 
Sbjct: 137 CVAKFGVDEDDSVAAALVDMYAKCGWVDSSWRAFTLAPQRSVLSWTS-----MIACLVNQ 191

Query: 449 ---GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
              G++  ++  FK M   +   P + T   ++      +L   G  LHG  LK    +D
Sbjct: 192 GSSGYYDTSLLLFKKMLALK-VWPTNATYSCILKVFDTPDLLSVGMQLHGCLLKMGTEVD 250

Query: 506 TRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
           T +  AL+TMYGRC  +     +  +C    +  +   ++ A+++      A+ +F+ + 
Sbjct: 251 TALGTALMTMYGRCGGVDEIPRL--ACRIRHDALSRTALLGAYARTGYNAEAIGVFKEMI 308

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-N 620
                 ++ ++  +L  C+  G LR  +Q+H +     F+ ++ + +A + +Y  C   N
Sbjct: 309 MKNMAIDQSAMTGMLQVCSSFGQLRMVRQVHCYALKTFFKLDTLLLNATITVYGRCGDIN 368

Query: 621 AA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
           +A              W+++++ Y  +G   E +  F +M   G+      + S+L A S
Sbjct: 369 SAETVFYLMEENDIISWTALLTCYTQNGLDEEVLLFFRKMLRKGLGSPVFCITSVLRASS 428

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
               +  GLQ ++  L +  +  +      +V +    G +Q A +   ++  +     W
Sbjct: 429 SISNLAVGLQIHSRTL-KLGIDDDNSVQNALVTLYANCGSVQVALKIFNSMSNRDIV-TW 486

Query: 727 GAMLSACSHHGDTKMGKQVAELL 749
            A+L++ S HG      Q+ +L+
Sbjct: 487 NALLTSFSQHGSEVAAIQLFDLM 509


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 189/581 (32%), Positives = 287/581 (49%), Gaps = 43/581 (7%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  ++VVSWN++I G+   G + E  +L  E + M  +  D  T    +S+C  +L LR 
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEAR-MSDLRLDKFTFSNALSVCGRTLDLRL 59

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           GR +H       LG  +L+ NSL+D Y K   +  A L+F +   + D VSWNS+I+G  
Sbjct: 60  GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL-DSVSWNSLIAGYV 118

Query: 357 K-----EMLYLCSQ-------FSFSTLLAILPSCNS--PESLEFGKSIHCWQLKLGFSNN 402
           +     EML L  +        +   L + L +C S    S+E GK +H   +KLG   +
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ-----NGHFQEAIKT 457
            +   AL+  Y   GDL  A  +  ++  + +   +N +I    Q     +    EA+  
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIF-KLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMY 516
           F  M Q +   P   T  +++ AC  +E AFE GK +H    K  +  D  + NAL+ +Y
Sbjct: 238 FFEM-QSRGMKPSEFTFSSILKACSTIE-AFECGKQIHAQIFKYNLQSDEFIGNALVELY 295

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIV 573
                I+     F S    ++ +W  +I    QN      L LF  L F   +P+E +I 
Sbjct: 296 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
            +LSAC  L  ++ G+QIH +    G    + I ++ + MY+ C                
Sbjct: 356 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP 415

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
              +WS MIS+   HG   EA++LF  M  SGI P   + + +L ACSH GLV+EGL+Y+
Sbjct: 416 DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYF 475

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
             M +++ + P  +H  CIVD+LGR+G+L EA  FI +   +  P +W ++LSAC  H  
Sbjct: 476 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKA 535

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           T  GK+VAE + +LEPE    Y+ L N+Y   G    A EI
Sbjct: 536 TDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEI 576



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 274/556 (49%), Gaps = 30/556 (5%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            ++VV+WN++I+   +       ++ F E     +R D  T    +S   +   L+ GR+
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H L   +G+     L N  ++MY KCG ++ +   F      D+VSWN++++G +    
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGELSYGKVIHALGIKLGYEDSPYVS 212
            ++ L    +M   G   ++ +L SA+ A  S     +  GK++H   +KLG +    V 
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD--VV 180

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF----ALNGKF-EEAFDLLHE 267
           V  +L+  Y++ GD+E A + F  M   +VV +NA+I GF     +  +F  EA  L  E
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           MQ  R ++P   T  +++  C+       G+ +H    +  L  D  + N+L++ YS S 
Sbjct: 241 MQ-SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           S+      F++  P  D+VSW S+I G            LF E+L+   +    T+  +L
Sbjct: 300 SIEDGLKCFHS-TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C +  +++ G+ IH + +K G  N TI  N+ + MY  CGD+ +A ++  + + N D 
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMTFKETKNPDI 417

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W+++I +  Q+G  +EA+  F+ M +    +P+ +T + V+ AC +  L  EG     
Sbjct: 418 VSWSVMISSNAQHGCAKEAVDLFELM-KGSGIAPNHITFLGVLVACSHGGLVEEGLRYFE 476

Query: 496 LALKSLMGLDTRVQNA--LITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           + +K   G+   V+++  ++ + GR  R  ++ S + +S +  +   W  ++SA   +KA
Sbjct: 477 I-MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKA 535

Query: 553 EVRALELF-RHLEFEP 567
                 +  R +E EP
Sbjct: 536 TDTGKRVAERVIELEP 551



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 21/356 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-----MGLHFFGEMV 65
           T+LL  Y+ +   E +  +F    + +VV +NAMI   ++   +        ++ F EM 
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             G++    T   I+ A + +   + G+ +H    K  + +D  + N  V +Y+  G + 
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 302

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
                F      D VSW +++ G + N   E  L  F E+ +SG + D  ++S  ++A A
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 362

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            L  +  G+ IHA  IK G  +  +  + NS I MY++CGDI++A   F      D+VSW
Sbjct: 363 NLAAVKSGEQIHAYAIKTGIGN--FTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-------R 298
           + +I   A +G  +EA DL  E+     + P+  T + ++  C+   L+ EG       +
Sbjct: 421 SVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMK 479

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             HG      +  ++     ++D   ++  L++AE          D V W S++S 
Sbjct: 480 KDHG------ITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529


>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 170/531 (32%), Positives = 273/531 (51%), Gaps = 41/531 (7%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           ++  C D+  LR G SVH Y ++  +   +L+ N L+  Y K   +  A  LF+ + P  
Sbjct: 65  ILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTM-PRR 123

Query: 344 DLVSWNSMIS-------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           D+VS+N+MIS             GL+ +M     + +  T   ++ +C+   +L      
Sbjct: 124 DVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIF 183

Query: 391 HCWQLKLGFSNNTIGVNALMHMY---INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           H   ++ G S+N    ++L+  Y   +   D + AF+ +  +    D   WNI+I  C +
Sbjct: 184 HAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMEL----DLVSWNIMIDGCAR 239

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           N   + A++ F  M +  N   D  TL ++I  C        G   HG A+K  +  +T 
Sbjct: 240 NNSKEHAVRMFSQMLKG-NVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETP 298

Query: 508 VQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HL 563
           + NALITMY +C + + S   +F S    N+ +W  MIS F QN+    A+ LF+    L
Sbjct: 299 IYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRL 358

Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---- 619
               N+ S  SIL     L  L  GKQIH  +    F  +  +++AL+DMYS C S    
Sbjct: 359 GVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDA 418

Query: 620 -----------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                        + ++MI +YG HGKG EA+E+  EM + G+ P   + +  L ACSH 
Sbjct: 419 HLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHG 478

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           GLV+EG++ +  M+E+++++P+ EH  C+VDMLGR+G+L EA  FI  + I+    VW  
Sbjct: 479 GLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWET 538

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +L AC  HG+  +G++ A+ + +L+P   G Y+ L+N+Y   G W+D V +
Sbjct: 539 LLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMV 589



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 231/487 (47%), Gaps = 28/487 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           I+   T    L+ G  VH   +K  +     + N  +++Y K G ++ +   F  M   D
Sbjct: 65  ILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRD 124

Query: 139 TVSWNTIMSGCLHNNYPEKCLL-YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            VS+NT++S  + NNY    L+  + +M     + ++++ +  + A   L  L    + H
Sbjct: 125 VVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFH 184

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  ++ G   + +V   +SL+  Y++   +E A +AF  +   D+VSWN +IDG A N  
Sbjct: 185 AHTVRCGLSSNEFVG--SSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNS 242

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            E A  +  +M L  +V  D  T+ ++I  C+    L+ G   HG AI+  L ++  + N
Sbjct: 243 KEHAVRMFSQM-LKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301

Query: 318 SLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLC- 363
           +L+  YSK    ++    +F +I+  N ++SW +MIS            GLFKEML L  
Sbjct: 302 ALITMYSKCEKGVASPVKIFGSISEPN-IISWTAMISGFMQNEQNEEAIGLFKEMLRLGV 360

Query: 364 --SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
             + FSFS+   ILP   +  +LE GK IH   +K  F  +    NAL+ MY  CG L  
Sbjct: 361 RENDFSFSS---ILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLED 417

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           A  +  ++  +   SC   +I++  Q+G  +EA++    M + +   PD VT +  + AC
Sbjct: 418 AHLVFMKMGKHDVVSC-TTMIMSYGQHGKGKEALEILAEM-KSEGLVPDGVTFLGCLYAC 475

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKSAST-VFESCYNCNLCT 539
            +  L  EG  +  + ++       R   A ++ M GR   +  A   + E     ++  
Sbjct: 476 SHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLV 535

Query: 540 WNCMISA 546
           W  ++ A
Sbjct: 536 WETLLGA 542



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 228/495 (46%), Gaps = 30/495 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL-HFFGEMVEEGIR 70
            LL+ Y    +   +  LF     +DVV++N MI+A V N    + L   + +M +E ++
Sbjct: 99  KLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVK 158

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   ++ A   +  L+   + H  +++ G+ ++  + +  V+ YAK   L  +   
Sbjct: 159 PNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKA 218

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ +   D VSWN ++ GC  NN  E  +  F +M     + D  +L+S +   +  G+L
Sbjct: 219 FNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDL 278

Query: 191 SYGKVIHALGIKLGY-EDSPYVSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAI 248
            +G   H   IKLG   ++P   + N+LI+MYS+C   + +  + F  ++  +++SW A+
Sbjct: 279 KHGMQFHGSAIKLGLAHETP---IYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAM 335

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GF  N + EEA  L  EM  +   E D  +  +++ +  +   L +G+ +H   I+  
Sbjct: 336 ISGFMQNEQNEEAIGLFKEMLRLGVRENDF-SFSSILPVYGNLANLEQGKQIHARIIKSW 394

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLC 363
            G DL + N+L+D YSK  SL  A L+F  +   +D+VS  +MI      G  KE L + 
Sbjct: 395 FGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGK-HDVVSCTTMIMSYGQHGKGKEALEIL 453

Query: 364 SQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-----LMH 411
           ++           T L  L +C+    +E G  +     K+   ++ +         ++ 
Sbjct: 454 AEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRV----FKIMIEDHNLKPKREHFACVVD 509

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNASPD 470
           M    G L  A + +  +   SD   W  ++ AC  +G      K+  K M  Q      
Sbjct: 510 MLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGP 569

Query: 471 SVTLVNVISACGNLE 485
            V L N+ +  G+ E
Sbjct: 570 YVLLANIYAERGSWE 584



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 176/377 (46%), Gaps = 9/377 (2%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
             +SL+  Y+     E ++  F E    D+V+WN MI  C  N      +  F +M++  
Sbjct: 198 VGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGN 257

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC-GDLNSS 127
           +R D  TL  I+   ++   LK G   H  +IK G+  ++ + N  + MY+KC   + S 
Sbjct: 258 VRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASP 317

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   + +SW  ++SG + N   E+ +  F+EM   G + ++ S SS +     L
Sbjct: 318 VKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNL 377

Query: 188 GELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             L  GK IHA  IK   G +    +SV N+LI MYS+CG +E A   F  M   DVVS 
Sbjct: 378 ANLEQGKQIHARIIKSWFGLD----LSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSC 433

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             +I  +  +GK +EA ++L EM+    + PD  T +  +  C+   L+ EG  V    I
Sbjct: 434 TTMIMSYGQHGKGKEALEILAEMK-SEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMI 492

Query: 306 R-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
               L         ++D   ++  L++AE   + +   +D++ W +++         +  
Sbjct: 493 EDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLG 552

Query: 365 QFSFSTLLAILPSCNSP 381
           + S   ++ + P  + P
Sbjct: 553 EKSAQKIMELQPGRHGP 569



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 182/412 (44%), Gaps = 27/412 (6%)

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           F F     IL  C     L  G S+H + +KL  +   +  N L+ +Y+  G +  A  L
Sbjct: 57  FKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQL 116

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNL 484
              +    D   +N +I A  +N +    +    S  ++++  P+ +T   +I AC G +
Sbjct: 117 FDTMPRR-DVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLI 175

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            L   G   H   ++  +  +  V ++L+  Y +   ++ A   F      +L +WN MI
Sbjct: 176 ALRLRG-IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMI 234

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
              ++N ++  A+ +F  +       +  ++ SI+  C++ G L+HG Q HG    LG  
Sbjct: 235 DGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLA 294

Query: 602 ENSFISSALLDMYSNCKSNAA----------------WSSMISAYGYHGKGWEAIELFHE 645
             + I +AL+ MYS C+   A                W++MIS +  + +  EAI LF E
Sbjct: 295 HETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKE 354

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M   G+R    S  S+L    +   +++G Q +  +++ +    +   +  ++DM  + G
Sbjct: 355 MLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSW-FGLDLSVNNALIDMYSKCG 413

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
            L++A+     +           M+ +   HG    GK+  E+L +++ E +
Sbjct: 414 SLEDAHLVFMKMGKHDVVSC-TTMIMSYGQHGK---GKEALEILAEMKSEGL 461



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 2/149 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   L  + +L+  YS     E +  +F +    DVV+   MI +  ++      L    
Sbjct: 395 FGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILA 454

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           EM  EG+  D  T L  + A +    +++G RV   +     +          V+M  + 
Sbjct: 455 EMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRA 514

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           G LN +E     M   +D + W T++  C
Sbjct: 515 GRLNEAENFIDEMGIESDVLVWETLLGAC 543


>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
          Length = 920

 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 191/721 (26%), Positives = 361/721 (50%), Gaps = 48/721 (6%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           FD + LL        +  LK+   +H      G+  D  L +  ++ YA  G L+ S   
Sbjct: 48  FDKSALLF--QGCADVRFLKK---IHANVFTHGLCWDVILGSKILSCYANLGALHESRLV 102

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +   D   WN+ M       YPE+ ++ ++ +  +    +  +++  + +   L  L
Sbjct: 103 FQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNL 162

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             GK +HA  +KL    + +V   +SLI +YS+      +   F  +  KD+V++ ++I 
Sbjct: 163 YLGKGVHADSLKLALSGNKFVG--SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMIT 220

Query: 251 GFA--LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           G++  ++     AF++  +M L  ++E +  T+V+L+ +  +   L+EG+S+H Y+IRR 
Sbjct: 221 GYSETVDSIAWNAFEIATDM-LQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRA 279

Query: 309 LGY-DLLMMNSLMDFYSKSNSL-SKAELLFNAIAPMNDLVSWNSMISGL------FKEML 360
           +G  D ++  S+++FY++  +  S A +L N+      + SWN+++SGL      F  + 
Sbjct: 280 IGVSDDILETSIVNFYTRCGAYQSAATVLQNS---KGTVASWNALLSGLNRAGQSFNAIQ 336

Query: 361 YLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           YL              T   +L +C       F  SIH + ++     + +   AL+ +Y
Sbjct: 337 YLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVY 396

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             C  ++ +  L  ++    D   +N +I    QN    EA      M   +  +PD  T
Sbjct: 397 TKCTRVMRSKYLFDQLIIK-DVVSYNAMIYGYLQNDMANEATSLLNYM-MAEGVAPDFAT 454

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++++++A  +      G+ +HG A++     D  V+N ++ MY  C  I +A  +F+S  
Sbjct: 455 VLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLE 514

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQ 590
             NL +W  M+     N      ++LF+ ++    +P+ +S+V+ + A + LG L   KQ
Sbjct: 515 KKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQ 574

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH  V+    +++   +++L+  Y+ C               ++   W++MISAY  HG 
Sbjct: 575 IHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGF 634

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
               +E+F +M    I+P + +  ++L+ACSH+GLV +G + +N+M   Y V P+ EH+ 
Sbjct: 635 HINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYG 694

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR+G L++ Y+FIK   ++ K  ++ A+LSAC  HG+T++   +++ L +  P+
Sbjct: 695 CMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQ 754

Query: 756 N 756
           N
Sbjct: 755 N 755



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 319/681 (46%), Gaps = 50/681 (7%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + +L+ Y+N+     S  +F +  N D+  WN+ +            +  +  +    I 
Sbjct: 84  SKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQIG 143

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           F+  T+  ++ + T++  L  G+ VH  S+K  +  +  + +  + +Y+K    N S   
Sbjct: 144 FNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGV 203

Query: 131 FSGMHCADTVSWNTIMSGCLH--NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           F  +   D V++ ++++G     ++          +M  +  + + V+L S +  +  LG
Sbjct: 204 FEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQIAGNLG 263

Query: 189 ELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            L  GK +H   I+  +G  D     +  S+++ Y++CG  ++A       +   V SWN
Sbjct: 264 ALQEGKSLHCYSIRRAIGVSDDI---LETSIVNFYTRCGAYQSAATVLQN-SKGTVASWN 319

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A++ G    G+   A   L  M     V PD  T   ++S CA+        S+H Y IR
Sbjct: 320 ALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIR 379

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R +  D+++  +L++ Y+K   + +++ LF+ +  + D+VS+N+MI G            
Sbjct: 380 RFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLI-IKDVVSYNAMIYGYLQNDMANEATS 438

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L   M+       F+T+L++L +      L  G+ IH + ++ GF ++    N +++MY 
Sbjct: 439 LLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYS 498

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG + AA ++   +   +  S W  ++  C  NGH  E ++ F+ M Q+    PDSV+L
Sbjct: 499 ACGKIAAARAIFDSLEKKNLVS-WTAMMKGCLSNGHADEVVQLFQVM-QKYGEKPDSVSL 556

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           V  + A  +L      K +H    +SL+  D    N+LI+ Y +C  +  ++ +F S   
Sbjct: 557 VTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKY 616

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
            NL TWN MISA++ +   +  LE+F+ +E    +P+E++  ++L+AC+  G+++ G +I
Sbjct: 617 RNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRI 676

Query: 592 HGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHG---KGWEAIELFHEMCN 648
                      NS  S     +YS       +  M+   G  G    G++ I+L      
Sbjct: 677 F----------NSMTS-----VYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKL------ 715

Query: 649 SGIRPTKSSVISLLSACSHSG 669
           S ++   +   +LLSAC   G
Sbjct: 716 STLKDKSTIFCALLSACRTHG 736



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 156/288 (54%), Gaps = 3/288 (1%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y+  +    S  LF +   KDVV++NAMI   ++N            M+ EG+
Sbjct: 389 TTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGV 448

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  T+L +++A      L +GR +H  +I+ G  +D  + N  + MY+ CG + ++  
Sbjct: 449 APDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARA 508

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   + VSW  +M GCL N + ++ +  F+ M   GE+ D+VSL +AV A + LG 
Sbjct: 509 IFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGH 568

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+  K IH    +   E     +  NSLIS Y++CG ++ +   F+ +  +++ +WNA+I
Sbjct: 569 LNGLKQIHCFVYRSLLEKDKITA--NSLISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMI 626

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +A++G      ++  +M+   +++PD  T  T+++ C+ + L+++G
Sbjct: 627 SAYAMHGFHINVLEMFKQME-EENIQPDELTFSTVLTACSHAGLVKDG 673



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +     +L  YS      ++ A+F     K++V+W AM+  C+ N      +  F
Sbjct: 482 GFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLF 541

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M + G + DS +L+  V A++ +  L   + +HC   ++ +  D    N  ++ YAKC
Sbjct: 542 QVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKC 601

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ S   F  +   +  +WN ++S    + +    L  F++M     Q D ++ S+ +
Sbjct: 602 GKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVL 661

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYS 222
            A +           HA  +K G+       + NS+ S+YS
Sbjct: 662 TACS-----------HAGLVKDGWR------IFNSMTSVYS 685


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 244/430 (56%), Gaps = 20/430 (4%)

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T+   + SC+    L  G+ +  +  K GF  +   +N+L+HMY +CGD+VAA  L   +
Sbjct: 173 TVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV 232

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
                   WN +I    +NG ++E ++ FK M + + A  D VTL++V +ACG L  A  
Sbjct: 233 QVKG-VIAWNAMIAGYVKNGDWKEVVEMFKGMLEVR-APFDEVTLLSVATACGRLGDANL 290

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ +   A +  M     +  AL+ MY +C ++  A  +F+  ++ ++  W+ MIS ++Q
Sbjct: 291 GQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQ 350

Query: 550 NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           +     AL +F  +   E  PN++++VS+LSAC  LG L  GK +H ++          +
Sbjct: 351 SDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVIL 410

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
            +AL+D Y+ C               ++   W+++I     +G+  EA+ELF  M  + I
Sbjct: 411 GTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANI 470

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
            PT  + I +L ACSH  LV+EG +++ +M ++Y + P  EH+ C+VD+LGR+G + EAY
Sbjct: 471 EPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAY 530

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           +FI+N+PI+P   VW A+LSAC+ H + ++G++  + +  L+P + G YI LSN Y ++G
Sbjct: 531 QFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVG 590

Query: 772 RWKDAVEIGK 781
           +WK+A  + K
Sbjct: 591 QWKNAAMVRK 600



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 196/438 (44%), Gaps = 36/438 (8%)

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           S+N +I  F   G  E+A  L  EM    +V PD  TV   +  C+    L  GR V  Y
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A +R    D  ++NSL+  Y+    +  A +LF+ +  +  +++WN+MI+G         
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ-VKGVIAWNAMIAGYVKNGDWKE 255

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +FK ML + + F   TLL++  +C        G+ I  +  + G   +     AL+ 
Sbjct: 256 VVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVD 315

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG+L  A  L  R+ H+ D   W+ +I   TQ+   +EA+  F  M Q    +P+ 
Sbjct: 316 MYAKCGELDKARRLFDRM-HSRDVVAWSAMISGYTQSDRCREALAIFNEM-QGTEVNPND 373

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           VT+V+V+SAC  L     GK +H    +  + L   +  AL+  Y +C  IK A   FES
Sbjct: 374 VTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFES 433

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
               N  TW  +I   + N     ALELF  +     EP +++ + +L AC+   ++  G
Sbjct: 434 MPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEG 493

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
           ++      H          +++   Y  C     +  M+   G  G   EA +    M  
Sbjct: 494 RR------HF---------TSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNM-- 536

Query: 649 SGIRPTKSSVISLLSACS 666
             I P      +LLSAC+
Sbjct: 537 -PIEPNAVVWRALLSACT 553



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 155/299 (51%), Gaps = 5/299 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF+       SL+  Y++     ++  LF+    K V+ WNAMI   V+N      +  
Sbjct: 200 RGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEM 259

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+E    FD  TLL + +A  ++     G+ +   + + GM+   +L    V+MYAK
Sbjct: 260 FKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAK 319

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+L+ +   F  MH  D V+W+ ++SG   ++   + L  F EM  +    ++V++ S 
Sbjct: 320 CGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSV 379

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A A LG L  GK +H+    +  +D P  V +  +L+  Y++CG I+ A +AF  M  
Sbjct: 380 LSACAVLGALETGKWVHSY---IRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV 436

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           ++  +W A+I G A NG+  EA +L   M L  ++EP   T + ++  C+   L+ EGR
Sbjct: 437 RNTWTWTALIKGMASNGRSREALELFSSM-LEANIEPTDVTFIGVLLACSHGCLVEEGR 494



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 21/417 (5%)

Query: 57  GLHFFGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
            LH F EM+++  +  D  T+   V + ++M  L  GR V   + K G + D  + N  +
Sbjct: 154 ALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLI 213

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           +MYA CGD+ ++   F  +     ++WN +++G + N   ++ +  F+ M       D V
Sbjct: 214 HMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEV 273

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L S   A   LG+ + G+ I     + G   S   ++  +L+ MY++CG+++ A R F 
Sbjct: 274 TLLSVATACGRLGDANLGQWIAEYAEEKGMLRS--RNLATALVDMYAKCGELDKARRLFD 331

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  +DVV+W+A+I G+  + +  EA  + +EMQ    V P+  T+V+++S CA    L 
Sbjct: 332 RMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT-EVNPNDVTMVSVLSACAVLGALE 390

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ VH Y  R+ L   +++  +L+DFY+K   +  A   F ++ P+ +  +W ++I G 
Sbjct: 391 TGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESM-PVRNTWTWTALIKGM 449

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNN 402
                      LF  ML    + +  T + +L +C+    +E G+          G    
Sbjct: 450 ASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPR 509

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF---QEAIK 456
                 ++ +    G +  A+  ++ +    +   W  ++ ACT + +    +EA+K
Sbjct: 510 IEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALK 566



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 171/342 (50%), Gaps = 22/342 (6%)

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           +NI+I +  + GH ++A+  F  M      SPD  T+ N + +C  +     G+ +   A
Sbjct: 138 YNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
            K    +D  V N+LI MY  C D+ +A  +F +     +  WN MI+ + +N      +
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257

Query: 558 ELFR-HLEFEP--NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           E+F+  LE     +E++++S+ +AC +LG    G+ I  +    G   +  +++AL+DMY
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMY 317

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               +   AWS+MIS Y    +  EA+ +F+EM  + + P   +++
Sbjct: 318 AKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMV 377

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+LSAC+  G ++ G ++ ++ +   D+         +VD   + G +++A +  +++P+
Sbjct: 378 SVLSACAVLGALETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPV 436

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGY 759
           +     W A++   + +G ++   ++   + +  +EP +V +
Sbjct: 437 R-NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTF 477


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 286/573 (49%), Gaps = 71/573 (12%)

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF--YSKSNS 328
           ++S  P    +++L+  C     + + + VH  AI++ L  + ++ N +M F    +   
Sbjct: 11  LKSFSPPTHPLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD 67

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
              A  LF+ I P  +L  WN+MI G            L+ EML    +    T   +  
Sbjct: 68  FQYARRLFDEI-PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 126

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
                 +LE+G+ +H   LK G   N     AL+ MY+ CG L  A  +   +   +D  
Sbjct: 127 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVI 185

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN++I A  + G F+E+ + F  M  +Q   P +VTLV V+SAC  L+    GK +H  
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQ-VLPTTVTLVLVLSACSKLKDLRTGKKVHSY 244

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV-- 554
                +  +  ++NA+I MY  C ++ SA  +F S  N ++ +W  ++S F+ N  E+  
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT-NLGEIDV 303

Query: 555 ------------------------------RALELFRHLE---FEPNEISIVSILSACTQ 581
                                          ALELFR+++    +P+E ++VS+L+AC  
Sbjct: 304 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAH 363

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           LG L  G+ I  ++     + + F+ +AL+DMY  C               +    W++M
Sbjct: 364 LGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAM 423

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I     +G G +A+++F  M  + I P + + I +LSAC+H+GLVD+G +Y+  M  ++ 
Sbjct: 424 IVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHG 483

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P   H+ C+VD+L R+G+L+EAYE I+N+PI+    VWGA+L+ C  + ++ M + V 
Sbjct: 484 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 543

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + + +LEP+N   Y+ L N+Y A  RW D  E+
Sbjct: 544 KQILELEPDNGAVYVLLCNIYAACKRWNDLREL 576



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 141/565 (24%), Positives = 253/565 (44%), Gaps = 58/565 (10%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM--YAKCGDLNSSECTFSGMHC 136
           ++S L     + Q + VHC +IK G+ A+  L N  +      + GD   +   F  +  
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            +   WNT++ G    ++P+  +  + EM   G + D  +             L YG+ +
Sbjct: 81  PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H   +K G + + +V    +L+ MY  CG ++ A   F      DV++WN II  +   G
Sbjct: 141 HGHVLKHGLQYNVFVHT--ALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 198

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           KFEE+  L   M+  + V P   T+V ++S C+    LR G+ VH Y     +  +L++ 
Sbjct: 199 KFEESRRLFLVME-DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257

Query: 317 NSLMDFYSKSNSLSKAELLFNAI------------------------------APMNDLV 346
           N+++D Y+    +  A  +F ++                               P  D V
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317

Query: 347 SWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQ 394
           SW +MI G      FKE L L      +       T++++L +C    +LE G+ I  + 
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            +    N+    NAL+ MY  CGD+  A S+ + +S   D   W  +IV    NGH ++A
Sbjct: 378 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGHGEKA 436

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--AL 512
           +  F +M  + +  PD +T + V+SAC +  L  +G+  + L + S  G++  + +   L
Sbjct: 437 LDMFSNML-KASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHGIEPNIAHYGCL 494

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNE- 569
           + +  R   +K A  V E+     N   W  +++      ++++  + + + LE EP+  
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 554

Query: 570 ---ISIVSILSACTQLGVLRHGKQI 591
              + + +I +AC +   LR  +Q+
Sbjct: 555 AVYVLLCNIYAACKRWNDLRELRQM 579



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 251/608 (41%), Gaps = 84/608 (13%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           F+ +  LF E    ++  WN MI          +G+  + EM+  G++ D  T   +   
Sbjct: 68  FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 127

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            T+   L+ GR +H   +K G+  +  +    V MY  CG L+++   F     AD ++W
Sbjct: 128 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 187

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH----- 197
           N I+S        E+    F  M         V+L   ++A + L +L  GK +H     
Sbjct: 188 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 247

Query: 198 -------------------------ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
                                    ALGI     +   +S T +++S ++  G+I+ A  
Sbjct: 248 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT-TIVSGFTNLGEIDVARN 306

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  KD VSW A+IDG+  + +F+EA +L   MQ   +V+PD  T+V++++ CA   
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQAT-NVKPDEFTMVSVLTACAHLG 365

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L  G  +  Y  R  +  DL + N+L+D Y K   + KAE +F  ++   D  +W +MI
Sbjct: 366 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 424

Query: 353 SGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL--- 397
            GL            F  ML         T + +L +C     ++ G+    + L++   
Sbjct: 425 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQ 481

Query: 398 -GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            G   N      L+ +    G L  A+ +++ +   +++  W  ++  C     ++E+  
Sbjct: 482 HGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRV---YRESDM 538

Query: 457 TFKSMTQQQNASPDS----VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-- 510
               + Q     PD+    V L N+ +AC         K  + L     M +D  ++   
Sbjct: 539 AEMVVKQILELEPDNGAVYVLLCNIYAAC---------KRWNDLRELRQMMMDKGIKKTP 589

Query: 511 --ALITMYGRCRDIKSASTVFESCYNCNL----CTWNCMISAFSQNKAEV--------RA 556
             +LI M GR  +  +         N +      T +  ++ +S + +EV        + 
Sbjct: 590 GCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKE 649

Query: 557 LELFRHLE 564
             +FRH E
Sbjct: 650 NSVFRHSE 657



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 186/384 (48%), Gaps = 51/384 (13%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           T+L+  Y      +++  +F + C K DV+TWN +I+A  +          F  M ++ +
Sbjct: 157 TALVQMYLLCGQLDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 215

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
              + TL++++SA +++  L+ G+ VH       + ++  L N  ++MYA CG+++S+  
Sbjct: 216 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 275

Query: 130 TFSGMHCADTVSWNTIMSGCLH-------NNY----PEK--------------------C 158
            F  M+  D +SW TI+SG  +        NY    PEK                     
Sbjct: 276 IFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 335

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L  FR M  +  + D  ++ S + A A LG L  G+ I     +   ++  +V   N+LI
Sbjct: 336 LELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR--NALI 393

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
            MY +CGD++ AE  F  M+ +D  +W A+I G A+NG  E+A D+   M L  S+ PD 
Sbjct: 394 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM-LKASILPDE 452

Query: 279 ATVVTLISLCADSLLLREGR-------SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            T + ++S C  + L+ +GR       S HG      +  ++     L+D  +++  L +
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHG------IEPNIAHYGCLVDLLARAGRLKE 506

Query: 332 A-ELLFNAIAPMNDLVSWNSMISG 354
           A E++ N     N +V W ++++G
Sbjct: 507 AYEVIENMPIKANSIV-WGALLAG 529



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 10/313 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T++++ ++N+   + +   F +   KD V+W AMI   + +      L  F  M    ++
Sbjct: 289 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ +++A   +  L+ G  +     +  +  D  + N  ++MY KCGD++ +E  
Sbjct: 349 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 408

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D  +W  ++ G   N + EK L  F  M  +    D ++    ++A    G +
Sbjct: 409 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 468

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
             G+  + L +   +   P ++    L+ + ++ G ++ A      M  K + + W A++
Sbjct: 469 DKGRK-YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 527

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI----SLCADSLLLREGRS-VHGYA 304
            G  +  + + A  ++ ++     +EPD   V  L+    + C     LRE R  +    
Sbjct: 528 AGCRVYRESDMAEMVVKQIL---ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKG 584

Query: 305 IRRLLGYDLLMMN 317
           I++  G  L+ MN
Sbjct: 585 IKKTPGCSLIEMN 597


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/594 (30%), Positives = 296/594 (49%), Gaps = 69/594 (11%)

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           S ++   NSLI+ YS+ G IE A   F  M  K+++SWN+I+ G+  N + +EA ++  +
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M      E +  +   L+S   ++ ++ E R V      R+   +++   +++  Y K  
Sbjct: 155 MS-----ERNTISWNGLVSGYINNGMINEAREVFD----RMPERNVVSWTAMVRGYVKEG 205

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKE--MLYLCSQFSFSTLLAILPSCNSPESLE 385
            +S+AE LF  + P  ++VSW  M+ GL +E  +   C  F              PE   
Sbjct: 206 MISEAETLFWQM-PEKNVVSWTVMLGGLLQEGRIDEACRLFDMM-----------PEK-- 251

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                           + +    ++  Y   G LV A  L   +   +  S W  +I   
Sbjct: 252 ----------------DVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVS-WTTMITGY 294

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            QN     A K F+ M ++   S     ++   + CG L+ A E    + + +KS++   
Sbjct: 295 VQNQQVDIARKLFEVMPEKNEVS--WTAMLKGYTNCGRLDEASE--LFNAMPIKSVVAC- 349

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
               NA+I  +G+  ++  A  VF+     +  TW+ MI  + +   E+ ALELFR ++ 
Sbjct: 350 ----NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQR 405

Query: 566 E---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
           E   PN  S++S+LS C  L  L HG++IH  +    F  + +++S LL MY  C     
Sbjct: 406 EGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAK 465

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                     K    W+S+I+ Y  HG G EA+ +FH+M  SGI P   + + +LSACS+
Sbjct: 466 AKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSY 525

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           +G V +GL+ +N+M  +Y V  + EH+ C+VD+LGR+GKL EA + I+ +P++    +WG
Sbjct: 526 TGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWG 585

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           A+L AC  H    + +  A+ L  LEP+N G +I LSN+Y + GRW D  E+ +
Sbjct: 586 ALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRR 639



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 131/561 (23%), Positives = 246/561 (43%), Gaps = 78/561 (13%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  Y++ G +  +   F  M   + +SWN+I++G   N  P++    F +M     +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + +S +  V+     G ++ G +  A  +     +   VS T +++  Y + G I  AE
Sbjct: 158 RNTISWNGLVS-----GYINNGMINEAREVFDRMPERNVVSWT-AMVRGYVKEGMISEAE 211

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             FW M  K+VVSW  ++ G    G+ +EA  L   M      E D+ T   +I      
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMP-----EKDVVTRTNMIGGYCQV 266

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L E R +     RR    +++   +++  Y ++  +  A  LF  + P  + VSW +M
Sbjct: 267 GRLVEARMLFDEMPRR----NVVSWTTMITGYVQNQQVDIARKLFE-VMPEKNEVSWTAM 321

Query: 352 ISGLFKEMLYLCSQFS-FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
           + G        C +    S L   +P           KS+             +  NA++
Sbjct: 322 LKGYTN-----CGRLDEASELFNAMPI----------KSV-------------VACNAMI 353

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             +   G++  A  +  ++    D   W+ +I    + G   +A++ F+ M Q++   P+
Sbjct: 354 LCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKGLELDALELFR-MMQREGIRPN 411

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
             +L++V+S C  L     G+ +H   ++S   LD  V + L++MY +C ++  A  VF+
Sbjct: 412 FPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFD 471

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
                ++  WN +I+ ++Q+   V AL +F  + F    P++++ V +LSAC+  G ++ 
Sbjct: 472 RFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKK 531

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           G +I   +      E  +     ++ Y         + M+   G  GK  EA++L  +M 
Sbjct: 532 GLEIFNSM------ETKYQVEQKIEHY---------ACMVDLLGRAGKLNEAMDLIEKM- 575

Query: 648 NSGIRPTKSSVI---SLLSAC 665
                P ++  I   +LL AC
Sbjct: 576 -----PMEADAIIWGALLGAC 591



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 170/375 (45%), Gaps = 14/375 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T T+++  Y  V     +  LF E   ++VV+W  MIT  V+N+ V +    F  M E+ 
Sbjct: 255 TRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK- 313

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSS 127
              +  +   ++   T  NC   GR+     +   M   S + CN  +  + + G++  +
Sbjct: 314 ---NEVSWTAMLKGYT--NC---GRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKA 365

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D  +W+ ++            L  FR M   G + +  SL S ++  A L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L +G+ IHA  ++  ++   YV+  + L+SMY +CG++  A++ F     KDVV WN+
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVA--SVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNS 483

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV-HGYAIR 306
           II G+A +G   EA  + H+M     + PD  T V ++S C+ +  +++G  + +    +
Sbjct: 484 IITGYAQHGLGVEALRVFHDMHF-SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK 542

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF 366
             +   +     ++D   ++  L++A  L   +    D + W +++      M    ++ 
Sbjct: 543 YQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEV 602

Query: 367 SFSTLLAILPSCNSP 381
           +   LL + P    P
Sbjct: 603 AAKKLLVLEPKNAGP 617



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 116/545 (21%), Positives = 225/545 (41%), Gaps = 84/545 (15%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +  SL+T YS +   E +  +F E  +K++++WN+++    +N+      + F +M E  
Sbjct: 100 SRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER- 158

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
              ++ +   +VS       + + R V     +  +++ +++    V  Y K G ++ +E
Sbjct: 159 ---NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAM----VRGYVKEGMISEAE 211

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA-------- 180
             F  M   + VSW  ++ G L     ++    F  M     + D V+ ++         
Sbjct: 212 TLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTRTNMIGGYCQVG 267

Query: 181 --VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM---------------YSQ 223
             V A     E+    V+    +  GY  +  V +   L  +               Y+ 
Sbjct: 268 RLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN 327

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG---KFEEAFDLLHE------------- 267
           CG ++ A   F  M  K VV+ NA+I  F  NG   K  + FD + E             
Sbjct: 328 CGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVY 387

Query: 268 ---------MQLMR-----SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
                    ++L R      + P+  ++++++S+CA    L  GR +H   +R     D+
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSF 368
            + + L+  Y K  +L+KA+ +F+  A + D+V WNS+I+     GL  E L +     F
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFA-VKDVVMWNSIITGYAQHGLGVEALRVFHDMHF 506

Query: 369 S-------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
           S       T + +L +C+   +++ G  I +  + K            ++ +    G L 
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVI 478
            A  L++++   +D   W  ++ AC  +     A    K +   + +NA P  + L N+ 
Sbjct: 567 EAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP-FILLSNIY 625

Query: 479 SACGN 483
           ++ G 
Sbjct: 626 ASQGR 630



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 187/438 (42%), Gaps = 40/438 (9%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           +F +   KD  TW+AMI         +  L  F  M  EGIR +  +L+ ++S    +  
Sbjct: 368 VFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLAN 427

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L  GR +H   +++    D  + +V ++MY KCG+L  ++  F      D V WN+I++G
Sbjct: 428 LDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITG 487

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG-KVIHALGIKLGYED 207
              +    + L  F +M +SG   D+V+    ++A +  G +  G ++ +++  K  Y+ 
Sbjct: 488 YAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETK--YQV 545

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLH 266
              +     ++ +  + G +  A      M  + D + W A++     + K + A     
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAK 605

Query: 267 EMQLMRSVEPDIATVVTLIS-------LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           ++ ++   EP  A    L+S          D   LR  R++    + +  G   +++   
Sbjct: 606 KLLVL---EPKNAGPFILLSNIYASQGRWDDVAELR--RNMRDRRVSKYPGCSWIVVEKK 660

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCN 379
           +  ++  +S    E      + +N ++ W   +SGL +E  Y   Q   S +L  +    
Sbjct: 661 VHKFTGGDSSGHPEH-----SEINRILEW---LSGLLREAGYYPDQ---SFVLHDVDEEE 709

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN---CGDLVAAFSLLQRISHNSDTS 436
             +SLE+    H  +L + +    I +   + +  N   CGD  AA  L+ +++      
Sbjct: 710 KVQSLEY----HSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGRE--- 762

Query: 437 CWNIVIVACTQNGHFQEA 454
              I++    +  HF++ 
Sbjct: 763 ---IILRDANRFHHFKDG 777


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/496 (32%), Positives = 266/496 (53%), Gaps = 31/496 (6%)

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------FKEMLYLC 363
           D  + ++L   Y   + +  A  +F+ + P  D V WN++++GL        F  M+   
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTV-PSPDTVLWNTLLAGLSGSEAVESFARMVCDG 206

Query: 364 S-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
           S +   +TL ++LP+      +  G+ +H +  K G + +   +  L+ +Y  CGD+ +A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             L   +    D   +N +I   + NG    ++  F  +       P+S TLV +I    
Sbjct: 267 RCLFDMM-EKPDLVAYNALISGYSVNGMVGSSVNLFTEL-MTLGLWPNSSTLVALIPVHS 324

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
                   + LHG  LKS    ++ V  A+ T++ R  D++SA   F++     + +WN 
Sbjct: 325 PFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNA 384

Query: 543 MISAFSQNKAEVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
           MIS ++QN     A+ LF     L   PN I+I S LSAC QLG L  GK +H  +    
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444

Query: 600 FQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFH 644
            + N ++ +AL+DMY+ C               K+  +W++MI+ YG HG+G EA++L+ 
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504

Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRS 704
           +M ++ + PT ++ +S+L ACSH GLV+EG + + +M ++Y + P  EH  C+VD+LGR+
Sbjct: 505 DMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRA 564

Query: 705 GKLQEAYEFIKNLPIQP-KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           G+L+EA+E I   P     PGVWGA+L AC  H D+ + K  ++ LF+L+PEN GYY+ L
Sbjct: 565 GQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLL 624

Query: 764 SNMYVALGRWKDAVEI 779
           SN++ +  ++ +A  +
Sbjct: 625 SNLHTSKKQYSEAAVV 640



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 222/458 (48%), Gaps = 37/458 (8%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG- 68
           +++L   Y  +S  + +  +F    + D V WN ++     +  V      F  MV +G 
Sbjct: 152 ASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAV----ESFARMVCDGS 207

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +R D+TTL  ++ A  ++  +  GR VH  + K G+     +    +++Y+KCGD+ S+ 
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           C F  M   D V++N ++SG   N      +  F E+   G   ++ +L + +   +  G
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG 327

Query: 189 ELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                + +H   +K G+  +SP   V+ ++ +++ +  D+E+A +AF  M  K + SWNA
Sbjct: 328 HDLLAQCLHGFVLKSGFTANSP---VSTAITTLHCRLNDMESARKAFDTMPEKTMESWNA 384

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+A NG  E A  L  +M  + +V P+  T+ + +S CA    L  G+ +H      
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKL-NVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  ++ +M +L+D Y+K  S+S+A  +FN +   N +VSWN+MI+G            L
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKN-VVSWNAMIAGYGLHGQGAEALKL 502

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA------- 408
           +K+ML      + +T L++L +C+    +E G     W++    +++   +N        
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEG-----WKVFRSMTDD-YAINPGIEHCTC 556

Query: 409 LMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVAC 445
           ++ +    G L  AF L+     ++     W  ++ AC
Sbjct: 557 MVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGAC 594



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 191/397 (48%), Gaps = 23/397 (5%)

Query: 107 DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
           D+ + +    +Y     ++ +   F  +   DTV WNT+++G   +   E     F  M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVES----FARMV 203

Query: 167 WSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
             G  + D  +L+S + A+A + +++ G+ +H+   K G  +  +  V   LIS+YS+CG
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEH--VLTGLISLYSKCG 261

Query: 226 DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           D+E+A   F  M   D+V++NA+I G+++NG    + +L  E+  +  + P+ +T+V LI
Sbjct: 262 DVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTL-GLWPNSSTLVALI 320

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
            + +        + +HG+ ++     +  +  ++   + + N +  A   F+ + P   +
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTM-PEKTM 379

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
            SWN+MISG            LF++M+ L  + +  T+ + L +C    +L  GK +H  
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRI 439

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
             +     N   + AL+ MY  CG +  A  +   +  N +   WN +I     +G   E
Sbjct: 440 ITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMD-NKNVVSWNAMIAGYGLHGQGAE 498

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           A+K +K M    +  P S T ++V+ AC +  L  EG
Sbjct: 499 ALKLYKDML-DAHLLPTSATFLSVLYACSHGGLVEEG 534



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 150/299 (50%), Gaps = 3/299 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H    T L++ YS     ES+  LF      D+V +NA+I+    N  V   ++ F
Sbjct: 242 GLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLF 301

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++  G+  +S+TL+ ++   +        + +H   +K+G  A+S +      ++ + 
Sbjct: 302 TELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRL 361

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            D+ S+   F  M      SWN ++SG   N   E  +  F +M     + + +++SS +
Sbjct: 362 NDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTL 421

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG LS GK +H +  +   E  P V V  +LI MY++CG I  A R F  M  K+
Sbjct: 422 SACAQLGALSLGKWLHRIITEEDLE--PNVYVMTALIDMYAKCGSISEARRIFNTMDNKN 479

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           VVSWNA+I G+ L+G+  EA  L  +M L   + P  AT ++++  C+   L+ EG  V
Sbjct: 480 VVSWNAMIAGYGLHGQGAEALKLYKDM-LDAHLLPTSATFLSVLYACSHGGLVEEGWKV 537



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 142/337 (42%), Gaps = 51/337 (15%)

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           LH LA+ +    DT V +AL  +Y     +  A  VF++  + +   WN +++  S ++A
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEA 195

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
                 +       P+  ++ S+L A  ++  +  G+ +H      G  E+  + + L+ 
Sbjct: 196 VESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLIS 255

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           +YS C                   A++++IS Y  +G    ++ LF E+   G+ P  S+
Sbjct: 256 LYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSST 315

Query: 658 VIS-----------LLSACSHSGLVDEGLQ--------------YYNNM---LEEYDVRP 689
           +++           LL+ C H  ++  G                  N+M    + +D  P
Sbjct: 316 LVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMP 375

Query: 690 ET--EHHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQ 744
           E   E    ++    ++G  + A   +E +  L ++P P    + LSAC+  G   +GK 
Sbjct: 376 EKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKW 435

Query: 745 VAELLFK--LEPENVGYYISLSNMYVALGRWKDAVEI 779
           +  ++ +  LEP NV    +L +MY   G   +A  I
Sbjct: 436 LHRIITEEDLEP-NVYVMTALIDMYAKCGSISEARRI 471


>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
          Length = 810

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 210/729 (28%), Positives = 345/729 (47%), Gaps = 62/729 (8%)

Query: 92  GRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           G  +H   IK G++ AD+   N  +  Y+K G L S+   F      + V+W  I+S   
Sbjct: 77  GSQLHASGIKLGVVFADTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAA 136

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA--CLGELSYGKVIHALGIKLGYEDS 208
               P   L  F  M  SG   +  +L+SA+ A       ++  G  +H L ++     +
Sbjct: 137 RGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGN 196

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLH 266
           PYV   +SL+ +Y++ G + AAER F G+    +DV  WNA+++G+  NG     +D   
Sbjct: 197 PYVG--SSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANG---HGYDATR 251

Query: 267 EMQLMRS--VEPDIATVVTLISLCADSLLLRE---GRSVHGYAIRRLL-GYDLLMMNSLM 320
            + LM    + PD+    T IS    S + R+   GR VHG  +R +L   +  +MN+LM
Sbjct: 252 TVALMHGSGIAPDM---FTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALM 308

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM--------LYLC----SQFSF 368
           D Y K+     A  +F  I    D VSWN+MISGL  E         +  C    +Q +F
Sbjct: 309 DMYFKAGQKETAADIFGKI-RWKDTVSWNTMISGLEDERAAADCFVDMARCGCRSNQVTF 367

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           S +L +            G  I     + G+S+N +  NA ++M   CG L  A+     
Sbjct: 368 SVMLRL-------SGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCD 420

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +    +   WN +I     +G   +A++ F+S+     A PD  T   V+SA      A 
Sbjct: 421 LGVR-NVVTWNEMIAGYGLHGCSGDAMRLFRSLVCF-GARPDEFTYPAVLSAFQQDHDAR 478

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRC-RDIKSASTVFESCYNCNLCTWNCMISAF 547
             + +H   LK        V  +LI         +     + +     +L +W   ISAF
Sbjct: 479 NHEQVHASVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAF 538

Query: 548 SQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            ++     AL LF     +    P+E  + +IL+AC    ++R  + IH  V   G  ++
Sbjct: 539 VKHGLGQEALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKH 598

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             +SSAL+D Y+ C               K    +++M++AY  HG   E + L+ EM  
Sbjct: 599 LCVSSALVDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQ 658

Query: 649 SGIR-PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
             +  PT ++ ++ +SACSH GLV++G   +++ML  + + P   ++ C++D+L R G L
Sbjct: 659 LQLAAPTPATFVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLL 718

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +EA   I+ +P QP P VW ++++ C  HG+ ++G   +E + ++ P + G Y+SLS++Y
Sbjct: 719 EEATGVIQAMPFQPWPAVWRSLMNGCRIHGNKELGLLASEQILRMAPNSDGAYVSLSHVY 778

Query: 768 VALGRWKDA 776
              G W+ A
Sbjct: 779 AEDGDWRSA 787



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 21/330 (6%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           ++VVTWN MI     + C    +  F  +V  G R D  T   ++SA  Q +  +    V
Sbjct: 424 RNVVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQV 483

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA---DTVSWNTIMSGCLHN 152
           H   +K G  +   +    +   A  G  +S       +  A   D VSW   +S  + +
Sbjct: 484 HASVLKQGFASCQFVSTSLIKAKAALG--SSVLGPLKIIQDAGEMDLVSWGVAISAFVKH 541

Query: 153 NYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
              ++ L  F        E+ D   L + + A A    +   + IH+L ++ G+  S ++
Sbjct: 542 GLGQEALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGH--SKHL 599

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V+++L+  Y++CGDI AA+ AF  ++ KD + +N ++  +A +G   E   L  EM  +
Sbjct: 600 CVSSALVDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQL 659

Query: 272 RSVEPDIATVVTLISLCADSLLLREGR-------SVHGYAIRRLLGYDLLMMNSLMDFYS 324
           +   P  AT V  IS C+   L+ +G+       S HG    R           L+D  +
Sbjct: 660 QLAAPTPATFVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTR------ANYACLIDLLA 713

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +   L +A  +  A+        W S+++G
Sbjct: 714 RRGLLEEATGVIQAMPFQPWPAVWRSLMNG 743



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 132/288 (45%), Gaps = 7/288 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNV-SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF +    STSL+ A + + S     L +  +    D+V+W   I+A V++      L 
Sbjct: 490 QGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALS 549

Query: 60  FFGE-MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F    V+   + D   L  I++A      ++Q R +H L ++ G      + +  V+ Y
Sbjct: 550 LFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSALVDAY 609

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSL 177
           AKCGD+ +++  F+ +   D + +NT+++   ++    + L  ++EM      A    + 
Sbjct: 610 AKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATF 669

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            +A++A + LG +  GK++ +  +   +  +P  +    LI + ++ G +E A      M
Sbjct: 670 VAAISACSHLGLVEQGKLLFSSMLS-AHGMNPTRANYACLIDLLARRGLLEEATGVIQAM 728

Query: 238 TCKD-VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
             +     W ++++G  ++G  E    LL   Q++R         V+L
Sbjct: 729 PFQPWPAVWRSLMNGCRIHGNKE--LGLLASEQILRMAPNSDGAYVSL 774


>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
 gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
          Length = 571

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 176/570 (30%), Positives = 288/570 (50%), Gaps = 51/570 (8%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV W A+I G+A +G F  A     EM+    V PD  T V ++    D   L +GR +H
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEME-RNHVLPDKITYVAVLGAIQD---LEQGRRIH 56

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
                     DL++ N+LM  Y+  +SL+ A  +F A+    D+VSW S+I+        
Sbjct: 57  VRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAM-DHRDVVSWTSIIAANARAGDF 115

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
               GLF+ M    ++ +  TLL +L  C+ P+    G +IH      G  ++    NA+
Sbjct: 116 PAAMGLFRRMQLQGTRPNRITLLELLAWCDDPDE---GAAIHERAFASGLRSDVPVCNAI 172

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY   G    A  L +R+   +  S W  ++ A  + G   +A++ F+ M +     P
Sbjct: 173 LNMYAKAGRFETASELFERMPVRNAVS-WTAMMAAMVRAGRHDDALRLFRDM-EDDGVEP 230

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DS+  + VI+AC +   A   + +HG  ++     DT V NA+I  Y RC  +K A   F
Sbjct: 231 DSIAFITVINACSS---AATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTF 287

Query: 530 -ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
            E     +  +W  MISAF++     R ++LFR +  E    NE++++++++AC     +
Sbjct: 288 VEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAI 347

Query: 586 RHGKQIHGHVFHLGFQ---ENSFISSALLDMYSNCKS---------------NAAWSSMI 627
           + G+ IH  V  +G+Q    +S +++ALLDMY  C S                 +W+S+I
Sbjct: 348 KEGRWIHDCV--IGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSII 405

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD- 686
           +A   +G G  A  LF  M   G+RP   + +S+++ACSH+GLVD G ++   + +++  
Sbjct: 406 AATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHRE 465

Query: 687 -VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            +    EH  CIVD+L R+G+L+EA   I ++P +P P VW A L+ C  + D   G++ 
Sbjct: 466 GIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKAYEDISRGQRA 525

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKD 775
           A  +  L+ +     I+LS+ Y A  R  D
Sbjct: 526 AAQILGLDEKTTAAVIALSSTYAASDRRGD 555



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 212/472 (44%), Gaps = 33/472 (6%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           VV W AMIT   ++      + FF EM    +  D  T + ++ A+     L+QGR +H 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQD---LEQGRRIHV 57

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
              + G   D  + N  + MYA C  L  +   F  M   D VSW +I++          
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +  FR M   G + + ++L   +   A   +   G  IH      G      V V N++
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELL---AWCDDPDEGAAIHERAFASGLRSD--VPVCNAI 172

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           ++MY++ G  E A   F  M  ++ VSW A++      G+ ++A  L  +M+    VEPD
Sbjct: 173 LNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDME-DDGVEPD 231

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
               +T+I+ C+ +      R +HG  IR     D  + N+++  Y++  SL +A   F 
Sbjct: 232 SIAFITVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFV 288

Query: 338 AIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            I    D VSW +MIS             LF+EML    + +  TL+ ++ +C    +++
Sbjct: 289 EIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIK 348

Query: 386 FGKSIH----CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            G+ IH     +QL+    ++++   AL+ MY  CG L  A  +   +    D   W  +
Sbjct: 349 EGRWIHDCVIGYQLE---RSSSMVATALLDMYGKCGSLEVAARIFGEL-EQPDVVSWTSI 404

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           I A  QNG    A + F +M Q +   P  VT V+V++AC +  L   GK  
Sbjct: 405 IAATAQNGDGSSAARLFCAM-QLEGVRPVDVTFVSVVAACSHAGLVDLGKEF 455



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 20/359 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  + +L+  Y+  S    +  +F    ++DVV+W ++I A          +  F
Sbjct: 63  GYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMGLF 122

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G R +  TLL +   L   +   +G  +H  +  +G+ +D  +CN  +NMYAK 
Sbjct: 123 RRMQLQGTRPNRITLLEL---LAWCDDPDEGAAIHERAFASGLRSDVPVCNAILNMYAKA 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G   ++   F  M   + VSW  +M+  +     +  L  FR+M   G + D+++  + +
Sbjct: 180 GRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVI 239

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
             +AC    +  + IH   I+ G +     +V+N++I  Y++CG ++ A R F  +   +
Sbjct: 240 --NAC-SSAATARWIHGCIIRGGCDSD--TAVSNAIIRAYARCGSLKEAYRTFVEIKERR 294

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSW  +I  FA  G+ +    L  EM L+  V  +  T++T+++ CA +  ++EGR +
Sbjct: 295 DHVSWTTMISAFAEFGRIKRCVQLFREM-LLEGVRANEVTLITVVNACAGASAIKEGRWI 353

Query: 301 HGYAIRRLLGYDL-----LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           H   I    GY L     ++  +L+D Y K  SL  A  +F  +    D+VSW S+I+ 
Sbjct: 354 HDCVI----GYQLERSSSMVATALLDMYGKCGSLEVAARIFGEL-EQPDVVSWTSIIAA 407



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 17/361 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +P   ++L  Y+    FE++  LF     ++ V+W AM+ A V        L  F
Sbjct: 161 GLRSDVPVCNAILNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLF 220

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M ++G+  DS   + +++A +        R +H   I+ G  +D+++ N  +  YA+C
Sbjct: 221 RDMEDDGVEPDSIAFITVINACSSA---ATARWIHGCIIRGGCDSDTAVSNAIIRAYARC 277

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G L  +  TF  +    D VSW T++S        ++C+  FREM   G +A+ V+L + 
Sbjct: 278 GSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITV 337

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V A A    +  G+ IH   I    E S  + V  +L+ MY +CG +E A R F  +   
Sbjct: 338 VNACAGASAIKEGRWIHDCVIGYQLERSSSM-VATALLDMYGKCGSLEVAARIFGELEQP 396

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVVSW +II   A NG    A  L   MQL   V P   T V++++ C+ + L+  G+  
Sbjct: 397 DVVSWTSIIAATAQNGDGSSAARLFCAMQL-EGVRPVDVTFVSVVAACSHAGLVDLGKEF 455

Query: 301 HGYAIRRLL-----GYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
               + RL      G +L + +   ++D  +++  L +AE + +++        W + ++
Sbjct: 456 ----VTRLRKDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLA 511

Query: 354 G 354
           G
Sbjct: 512 G 512


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/533 (30%), Positives = 276/533 (51%), Gaps = 44/533 (8%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           +A+VV L      SLL   GR+ H   ++ L   +   + N L++ Y+K + L+ A+L+ 
Sbjct: 9   LASVVELAVSVRSSLL---GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLIL 65

Query: 337 NAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF---------- 386
             +AP   +V+W ++I+G  +   ++ +   FS +L+    C  P    F          
Sbjct: 66  E-LAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLS---DCVRPNDFTFPCVLKASTGL 121

Query: 387 -----GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
                GK +H   +K G  N+     ++  MY   G L  A+ +   + H  +   WN  
Sbjct: 122 RMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHR-NLETWNAY 180

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I     +G  ++++  F  + +     PDS+T    ++AC +      G  LHG  ++S 
Sbjct: 181 ISNSVLHGRPEDSVIAFIELLRV-GGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSG 239

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
            G +  V N LI  YG+C +++ +  VF+     N  +W+ +I+A+ QN  E +A  LF 
Sbjct: 240 YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFL 299

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
             R  + EP +  + S+L AC  L  +  G+ +         ++N F++SAL+DMY  C 
Sbjct: 300 RARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCG 359

Query: 619 S--------NA-------AWSSMISAYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLL 662
           S        NA       +W++++  Y + G   +A+ L  EM ++ GI P+  S+I  L
Sbjct: 360 SIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICAL 419

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACS +G +  G++ + +M E Y V P  EH+ C+VD+LGR+G ++ AY+FIK +P  P 
Sbjct: 420 SACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPT 479

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
             +WGA+L AC  HG  ++GK  AE LF+L+P++ G ++ LSNM+ A GRW++
Sbjct: 480 ISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEE 532



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 233/489 (47%), Gaps = 21/489 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+ + +  S+  +      + VVTW A+I   V+N C V  L  F +M+ + +R +
Sbjct: 48  LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTF 131
             T   ++ A T +     G+ +H L++K G+I D  + C+VF +MY+K G LN +   F
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVF-DMYSKLGFLNDAYKVF 166

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   +  +WN  +S  + +  PE  ++ F E+   G + D+++  + + A +    L 
Sbjct: 167 DEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLG 226

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   I+ GY  +  VSV+N LI  Y +CG++E +E  F  M  ++ VSW+++I  
Sbjct: 227 PGCQLHGFIIRSGYGQN--VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAA 284

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N + E+A  L    +    +EP    V +++  CA    +  GRSV   A++  +  
Sbjct: 285 YVQNNEEEKASCLFLRAR-KEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQ 343

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ + ++L+D Y K  S+  AE  FNA+ P  +LVSWN+++ G            L +EM
Sbjct: 344 NIFVASALVDMYGKCGSIDNAEQAFNAM-PERNLVSWNALLGGYAHQGHANKAVALLEEM 402

Query: 360 LYLCSQF-SFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
                   S+ +L+  L +C+    L+ G  I    + + G          L+ +    G
Sbjct: 403 TSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAG 462

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVN 476
            +  A+  ++R+      S W  ++ AC  +G  +   +   K        S + V L N
Sbjct: 463 MVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSN 522

Query: 477 VISACGNLE 485
           + +A G  E
Sbjct: 523 MFAATGRWE 531



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 231/505 (45%), Gaps = 43/505 (8%)

Query: 92  GRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           GR  H   +K       + L N  VNMYAK   LNS++       C   V+W  +++G +
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N      LL+F +M     + ++ +    + AS  L   + GK +HAL +K G  +  +
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V    S+  MYS+ G +  A + F  M  +++ +WNA I    L+G+ E++  ++  ++L
Sbjct: 145 VGC--SVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDS--VIAFIEL 200

Query: 271 MR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +R   +PD  T    ++ C+D L L  G  +HG+ IR   G ++ + N L+DFY K   +
Sbjct: 201 LRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEV 260

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLFK-------EMLYLCSQ--------FSFSTLLAI 374
             +E++F+ +   N  VSW+S+I+   +         L+L ++        F  S++L  
Sbjct: 261 ECSEMVFDRMGERNS-VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLC- 318

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
             +C     +EFG+S+    +K     N    +AL+ MY  CG +  A      +   + 
Sbjct: 319 --ACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNL 376

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELA---F 488
            S WN ++      GH  +A+   + MT      P  V+L+  +SAC   G+L+     F
Sbjct: 377 VS-WNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435

Query: 489 EGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMIS 545
           E       ++K   G++   ++   L+ + GR   ++ A    +   +   +  W  ++ 
Sbjct: 436 E-------SMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLG 488

Query: 546 AFS-QNKAEVRALELFRHLEFEPNE 569
           A     K E+  L   +  E +P +
Sbjct: 489 ACRMHGKPELGKLAAEKLFELDPKD 513



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 154/300 (51%), Gaps = 2/300 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            G +  +    S+   YS + +   +  +F E  ++++ TWNA I+  V +      +  
Sbjct: 137 EGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIA 196

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++  G + DS T    ++A +    L  G  +H   I++G   + S+ N  ++ Y K
Sbjct: 197 FIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGK 256

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++  SE  F  M   ++VSW+++++  + NN  EK    F        +  +  +SS 
Sbjct: 257 CGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSV 316

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L E+ +G+ + AL +K   E + +V+  ++L+ MY +CG I+ AE+AF  M  +
Sbjct: 317 LCACAGLSEIEFGRSVQALAVKACVEQNIFVA--SALVDMYGKCGSIDNAEQAFNAMPER 374

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VSWNA++ G+A  G   +A  LL EM     + P   +++  +S C+ +  L+ G  +
Sbjct: 375 NLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 5/261 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++  S  L+  Y      E S  +F     ++ V+W+++I A V+N         F
Sbjct: 239 GYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
               +E I      +  ++ A   ++ ++ GR V  L++KA +  +  + +  V+MY KC
Sbjct: 299 LRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKC 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSA 180
           G ++++E  F+ M   + VSWN ++ G  H  +  K +    EM   +G     VSL  A
Sbjct: 359 GSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICA 418

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A +  G+L  G K+  ++  + G E  P       L+ +  + G +E A      M  
Sbjct: 419 LSACSRAGDLKTGMKIFESMKERYGVEPGP--EHYACLVDLLGRAGMVECAYDFIKRMPF 476

Query: 240 KDVVS-WNAIIDGFALNGKFE 259
              +S W A++    ++GK E
Sbjct: 477 PPTISIWGALLGACRMHGKPE 497


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/533 (30%), Positives = 276/533 (51%), Gaps = 44/533 (8%)

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           +A+VV L      SLL   GR+ H   ++ L   +   + N L++ Y+K + L+ A+L+ 
Sbjct: 9   LASVVELAVSVRSSLL---GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLIL 65

Query: 337 NAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF---------- 386
             +AP   +V+W ++I+G  +   ++ +   FS +L+    C  P    F          
Sbjct: 66  E-LAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLS---DCVRPNDFTFPCVLKASTGL 121

Query: 387 -----GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
                GK +H   +K G  N+     ++  MY   G L  A+ +   + H  +   WN  
Sbjct: 122 RMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHR-NLETWNAY 180

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I     +G  ++++  F  + +     PDS+T    ++AC +      G  LHG  ++S 
Sbjct: 181 ISNSVLHGRPEDSVIAFIELLRV-GGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSG 239

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
            G +  V N LI  YG+C +++ +  VF+     N  +W+ +I+A+ QN  E +A  LF 
Sbjct: 240 YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFL 299

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
             R  + EP +  + S+L AC  L  +  G+ +         ++N F++SAL+DMY  C 
Sbjct: 300 RARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCG 359

Query: 619 S--------NA-------AWSSMISAYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLL 662
           S        NA       +W++++  Y + G   +A+ L  EM ++ GI P+  S+I  L
Sbjct: 360 SIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICAL 419

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACS +G +  G++ + +M E Y V P  EH+ C+VD+LGR+G ++ AY+FIK +P  P 
Sbjct: 420 SACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPT 479

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
             +WGA+L AC  HG  ++GK  AE LF+L+P++ G ++ LSNM+ A GRW++
Sbjct: 480 ISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEE 532



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 232/489 (47%), Gaps = 21/489 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+ + +  S+  +      + VVTW A+I   V+N C V  L  F +M+ + +R +
Sbjct: 48  LVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPN 107

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTF 131
             T   ++ A T +     G+ +H L++K G+I D  + C+VF +MY+K G LN +   F
Sbjct: 108 DFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVF-DMYSKLGFLNDAYKVF 166

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   +  +WN  +S  + +  PE  ++ F E+   G + D+++    + A +    L 
Sbjct: 167 DEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLG 226

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H   I+ GY  +  VSV+N LI  Y +CG++E +E  F  M  ++ VSW+++I  
Sbjct: 227 PGCQLHGFIIRSGYGQN--VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAA 284

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N + E+A  L    +    +EP    V +++  CA    +  GRSV   A++  +  
Sbjct: 285 YVQNNEEEKASCLFLRAR-KEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQ 343

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ + ++L+D Y K  S+  AE  FNA+ P  +LVSWN+++ G            L +EM
Sbjct: 344 NIFVASALVDMYGKCGSIDNAEQAFNAM-PERNLVSWNALLGGYAHQGHANKAVALLEEM 402

Query: 360 LYLCSQF-SFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCG 417
                   S+ +L+  L +C+    L+ G  I    + + G          L+ +    G
Sbjct: 403 TSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAG 462

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVN 476
            +  A+  ++R+      S W  ++ AC  +G  +   +   K        S + V L N
Sbjct: 463 MVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSN 522

Query: 477 VISACGNLE 485
           + +A G  E
Sbjct: 523 MFAATGRWE 531



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 129/505 (25%), Positives = 231/505 (45%), Gaps = 43/505 (8%)

Query: 92  GRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           GR  H   +K       + L N  VNMYAK   LNS++       C   V+W  +++G +
Sbjct: 25  GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            N      LL+F +M     + ++ +    + AS  L   + GK +HAL +K G  +  +
Sbjct: 85  QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V    S+  MYS+ G +  A + F  M  +++ +WNA I    L+G+ E++  ++  ++L
Sbjct: 145 VGC--SVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDS--VIAFIEL 200

Query: 271 MR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +R   +PD  T    ++ C+D L L  G  +HG+ IR   G ++ + N L+DFY K   +
Sbjct: 201 LRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEV 260

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGLFK-------EMLYLCSQ--------FSFSTLLAI 374
             +E++F+ +   N  VSW+S+I+   +         L+L ++        F  S++L  
Sbjct: 261 ECSEMVFDRMGERNS-VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLC- 318

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
             +C     +EFG+S+    +K     N    +AL+ MY  CG +  A      +   + 
Sbjct: 319 --ACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNL 376

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELA---F 488
            S WN ++      GH  +A+   + MT      P  V+L+  +SAC   G+L+     F
Sbjct: 377 VS-WNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIF 435

Query: 489 EGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMIS 545
           E       ++K   G++   ++   L+ + GR   ++ A    +   +   +  W  ++ 
Sbjct: 436 E-------SMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLG 488

Query: 546 AFS-QNKAEVRALELFRHLEFEPNE 569
           A     K E+  L   +  E +P +
Sbjct: 489 ACRMHGKPELGKLAAEKLFELDPKD 513



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 154/300 (51%), Gaps = 2/300 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            G +  +    S+   YS + +   +  +F E  ++++ TWNA I+  V +      +  
Sbjct: 137 EGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIA 196

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F E++  G + DS T    ++A +    L  G  +H   I++G   + S+ N  ++ Y K
Sbjct: 197 FIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGK 256

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++  SE  F  M   ++VSW+++++  + NN  EK    F        +  +  +SS 
Sbjct: 257 CGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSV 316

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A L E+ +G+ + AL +K   E + +V+  ++L+ MY +CG I+ AE+AF  M  +
Sbjct: 317 LCACAGLSEIEFGRSVQALAVKACVEQNIFVA--SALVDMYGKCGSIDNAEQAFNAMPER 374

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VSWNA++ G+A  G   +A  LL EM     + P   +++  +S C+ +  L+ G  +
Sbjct: 375 NLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 5/261 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++  S  L+  Y      E S  +F     ++ V+W+++I A V+N         F
Sbjct: 239 GYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
               +E I      +  ++ A   ++ ++ GR V  L++KA +  +  + +  V+MY KC
Sbjct: 299 LRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKC 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSA 180
           G ++++E  F+ M   + VSWN ++ G  H  +  K +    EM   +G     VSL  A
Sbjct: 359 GSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICA 418

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           ++A +  G+L  G K+  ++  + G E  P       L+ +  + G +E A      M  
Sbjct: 419 LSACSRAGDLKTGMKIFESMKERYGVEPGP--EHYACLVDLLGRAGMVECAYDFIKRMPF 476

Query: 240 KDVVS-WNAIIDGFALNGKFE 259
              +S W A++    ++GK E
Sbjct: 477 PPTISIWGALLGACRMHGKPE 497


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 180/625 (28%), Positives = 320/625 (51%), Gaps = 50/625 (8%)

Query: 178 SSAVAASACLGELSY-GKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGDIEAAERAF 234
           SS + ++  L ELS  G+V  A  +   ++  PY      N +IS Y+  G++  A + F
Sbjct: 35  SSNLDSNQLLSELSKNGRVDEARKL---FDQMPYRDKYTWNIMISAYANLGNLVEARKLF 91

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                K+ ++W++++ G+  NG   E      +M      +P   T+ +++  C+   LL
Sbjct: 92  NETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKPSQYTLGSVLRACSTLSLL 150

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G+ +H YAI+  L  ++ +   L+D YSK   L +AE LF ++    + V W +M++G
Sbjct: 151 HTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTG 210

Query: 355 L------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                        FKEM     + +  T  +IL +C S  +  FG+ +H   +  GF  N
Sbjct: 211 YAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPN 270

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +AL+ MY  CGDL +A  +L  +  + D  CWN +IV C  +G+ +EA+  F  M 
Sbjct: 271 VYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYMEEALVLFHKM- 328

Query: 463 QQQNASPDSVTLVNVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
             ++   D  T  +V+   ++C NL++   G+S+H L +K+       V NAL+ MY + 
Sbjct: 329 HNRDIRIDDFTYPSVLKSLASCKNLKI---GESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSIL 576
            ++  A  VF    + ++ +W  +++ +  N    +AL+LF   R    + ++  +  + 
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKG 636
           SAC +L V+  G+Q+H           +FI S+   + S      A +S+I+ Y   G  
Sbjct: 446 SACAELTVIEFGRQVHA----------NFIKSSAGSLLS------AENSLITMYAKCGCL 489

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +AI +F  M    +     S  +++   + +GLV+ G  Y+ +M + Y ++P ++H+ C
Sbjct: 490 EDAIRVFDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYAC 545

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           ++D+LGR+GK+ EA   +  + ++P   +W ++LSAC  HG+ ++G++  + L KLEP N
Sbjct: 546 MIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSN 605

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              Y+ LSNM+   GRW+DA  I +
Sbjct: 606 SLPYVLLSNMFSVAGRWEDAAHIRR 630



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 239/493 (48%), Gaps = 25/493 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +++AY+N+     +  LF ET  K+ +TW+++++   +N C V GL  F +M  +G +  
Sbjct: 74  MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL  ++ A + ++ L  G+++HC +IK  + A+  +    V+MY+KC  L  +E  F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 133 GM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +    + V W  +++G   N    K +  F+EM   G ++++ +  S + A   +   +
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G+ +H   I  G+   P V V ++L+ MY++CGD+ +A      M   DVV WN++I G
Sbjct: 254 FGRQVHGCIIWSGF--GPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G  EEA  L H+M   R +  D  T  +++   A    L+ G SVH   I+   G+
Sbjct: 312 CVTHGYMEEALVLFHKMH-NRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIK--TGF 368

Query: 312 DL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           D    + N+L+D Y+K  +LS A  +FN I    D++SW S+++G            LF 
Sbjct: 369 DACKTVSNALVDMYAKQGNLSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFC 427

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M           +  +  +C     +EFG+ +H   +K    +     N+L+ MY  CG
Sbjct: 428 DMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCG 487

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTL 474
            L  A  +   +   +  S W  +IV   QNG  +     F+SM +     P S     +
Sbjct: 488 CLEDAIRVFDSMETRNVIS-WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACM 546

Query: 475 VNVISACGNLELA 487
           ++++   G +  A
Sbjct: 547 IDLLGRAGKINEA 559



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 172/665 (25%), Positives = 300/665 (45%), Gaps = 86/665 (12%)

Query: 90  KQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           K GRV     +   M   D    N+ ++ YA  G+L  +   F+     ++++W++++SG
Sbjct: 49  KNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSG 108

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    + L  F +M   G++    +L S + A + L  L  GK+IH   IK+  E +
Sbjct: 109 YCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEAN 168

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            +V+    L+ MYS+C  +  AE  F+ +   K+ V W A++ G+A NG+  +A     E
Sbjct: 169 IFVAT--GLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKE 226

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+  + +E +  T  ++++ C        GR VHG  I    G ++ + ++L+D Y+K  
Sbjct: 227 MR-NQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCG 285

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYL----------CSQFSFSTLL 372
            L+ A ++ + +  ++D+V WNSMI      G  +E L L             F++ ++L
Sbjct: 286 DLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVL 344

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
             L SC   ++L+ G+S+H   +K GF       NAL+ MY   G+L  A  +  +I  +
Sbjct: 345 KSLASC---KNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL-D 400

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  ++     NG  ++A++ F  M +      D   +  V SAC  L +   G+ 
Sbjct: 401 KDVISWTSLVTGYVHNGFHEKALQLFCDM-RTARVDLDQFVVACVFSACAELTVIEFGRQ 459

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H   +KS  G     +N+LITMY +C  ++ A  VF+S    N+ +W  +I  ++QN  
Sbjct: 460 VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN-- 517

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
                                         G++  G+              S+  S +  
Sbjct: 518 ------------------------------GLVETGQ--------------SYFES-MEK 532

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
           +Y    ++  ++ MI   G  GK  EA  L + M    + P  +   SLLSAC   G ++
Sbjct: 533 VYGIKPASDHYACMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLE 589

Query: 673 EGLQYYNNM--LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPGV-W 726
            G +   N+  LE  +  P    +V + +M   +G+ ++A      +K + I  +PG  W
Sbjct: 590 LGERAGKNLIKLEPSNSLP----YVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSW 645

Query: 727 GAMLS 731
             M S
Sbjct: 646 IEMKS 650



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 229/485 (47%), Gaps = 28/485 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGE 63
           A++  +T L+  YS       +  LF+   + K+ V W AM+T   +N   +  +  F E
Sbjct: 167 ANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKE 226

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M  +G+  +  T   I++A T ++    GR VH   I +G   +  + +  V+MYAKCGD
Sbjct: 227 MRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGD 286

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L S+      M   D V WN+++ GC+ + Y E+ L+ F +M     + D+ +  S + +
Sbjct: 287 LASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKS 346

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A    L  G+ +H+L IK G++     +V+N+L+ MY++ G++  A   F  +  KDV+
Sbjct: 347 LASCKNLKIGESVHSLTIKTGFDACK--TVSNALVDMYAKQGNLSCALDVFNKILDKDVI 404

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW +++ G+  NG  E+A  L  +M+  R V+ D   V  + S CA+  ++  GR VH  
Sbjct: 405 SWTSLVTGYVHNGFHEKALQLFCDMRTAR-VDLDQFVVACVFSACAELTVIEFGRQVHAN 463

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
            I+   G  L   NSL+  Y+K   L  A  +F+++   N ++SW ++I G  +  L   
Sbjct: 464 FIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRN-VISWTAIIVGYAQNGLVET 522

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            Q  F ++  +                       G    +     ++ +    G +  A 
Sbjct: 523 GQSYFESMEKV----------------------YGIKPASDHYACMIDLLGRAGKINEAE 560

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACG 482
            LL R+    D + W  ++ AC  +G+ +   +  K++ + + + S   V L N+ S  G
Sbjct: 561 HLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAG 620

Query: 483 NLELA 487
             E A
Sbjct: 621 RWEDA 625



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 141/275 (51%), Gaps = 2/275 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   ++L+  Y+      S+  +       DVV WN+MI  CV +  +   L  F
Sbjct: 266 GFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLF 325

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    IR D  T   ++ +L     LK G  VH L+IK G  A  ++ N  V+MYAK 
Sbjct: 326 HKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+ +   F+ +   D +SW ++++G +HN + EK L  F +M  +    D   ++   
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  + +G+ +HA  IK        +S  NSLI+MY++CG +E A R F  M  ++
Sbjct: 446 SACAELTVIEFGRQVHANFIK--SSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRN 503

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           V+SW AII G+A NG  E        M+ +  ++P
Sbjct: 504 VISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP 538


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 303/627 (48%), Gaps = 85/627 (13%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           + V N LI  YS    ++ A   F GM  +D VSW+ ++ GFA  G +   F    E  L
Sbjct: 113 IVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRE--L 170

Query: 271 MR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +R    PD  T+  +I  C D   L+                      +L+D Y K   +
Sbjct: 171 IRCGARPDNYTLPFVIRACRDLKNLQ---------------------MALVDMYVKCREI 209

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A  LF+ +    DLV+W  MI G            LF++M           ++ ++ +
Sbjct: 210 EDARFLFDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFA 268

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C    ++   + I  +  +  F  + I   A++ MY  CG + +A  +  R+   +  S 
Sbjct: 269 CAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVIS- 327

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W+ +I A   +G  ++A+  F+ M       PD +TL +++ AC N     + + +H  A
Sbjct: 328 WSAMIAAYGYHGQGRKALDLFRMMLSS-GMLPDKITLASLLYACINCRNLTQVRQVHAQA 386

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
               M  +  V N L+  Y   R +  A  +F+     +  +W+ M+  F++    +   
Sbjct: 387 SVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCF 446

Query: 558 ELFRHL-------------------------------EFEPNEISIVSILSACTQLGVLR 586
             FR L                                  P+++++V+++ AC +LG + 
Sbjct: 447 GTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 506

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
             + I  ++    FQ +  + +A++DM++ C               K+  +WS+MI+AYG
Sbjct: 507 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 566

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
           YHG+G +A++LF  M  SGI P K +++SLL ACSH+GLV+EGL++++ M E+Y VR + 
Sbjct: 567 YHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADV 626

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           +H+ C+VD+LGR+G+L EA + I+++ ++   G+WGA L AC  H D  + ++ A  L +
Sbjct: 627 KHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLE 686

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVE 778
           L+P+N G+YI LSN+Y   GRW+D  +
Sbjct: 687 LQPQNPGHYILLSNIYANAGRWEDVAK 713



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 168/733 (22%), Positives = 312/733 (42%), Gaps = 100/733 (13%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +SAL     L Q R VH  +   GM+ +  + N  +  Y+    L+ +   F GM   D+
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW+ ++ G         C   FRE+   G + DN +L   + A   L  L         
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------- 197

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
                           +L+ MY +C +IE A   F  M  +D+V+W  +I G+A  GK  
Sbjct: 198 ----------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 241

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           E+  L  +M+    V PD   +VT++  CA    + + R +  Y  R+    D+++  ++
Sbjct: 242 ESLVLFEKMR-EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 300

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D Y+K   +  A  +F+ +   N ++SW++MI+             LF+ ML       
Sbjct: 301 IDMYAKCGCVESAREIFDRMEEKN-VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPD 359

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             TL ++L +C +  +L   + +H      G   N I  N L+H Y     L  A+ L  
Sbjct: 360 KITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFD 419

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT------------------------- 462
            +    D+  W++++    + G +     TF+ +                          
Sbjct: 420 GMC-VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFD 478

Query: 463 --QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
             +++   PD V +V V+ AC  L    + +++     +    LD  +  A+I M+ +C 
Sbjct: 479 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 538

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILS 577
            ++SA  +F+     N+ +W+ MI+A+  +    +AL+LF  +      PN+I++VS+L 
Sbjct: 539 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 598

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGW 637
           AC+  G++  G +     F L +++           YS       ++ ++   G  G+  
Sbjct: 599 ACSHAGLVEEGLRF----FSLMWED-----------YSVRADVKHYTCVVDLLGRAGRLD 643

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVC 696
           EA++L   M    +   +    + L AC     V    +   ++LE   ++P+   H++ 
Sbjct: 644 EALKLIESMT---VEKDEGLWGAFLGACRTHKDVVLAEKAATSLLE---LQPQNPGHYIL 697

Query: 697 IVDMLGRSGKLQE---AYEFIKNLPIQPKPGVWGAMLSACSHH---GDT--KMGKQVAEL 748
           + ++   +G+ ++     + +    ++  PG     +   SH    GDT     K++ E+
Sbjct: 698 LSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEM 757

Query: 749 LFKL--EPENVGY 759
           L  L  + E VGY
Sbjct: 758 LKSLGNKLELVGY 770



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/524 (22%), Positives = 219/524 (41%), Gaps = 46/524 (8%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+  Y      E +  LF +   +D+VTW  MI    E       L  F +M EEG+  
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 257

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D   ++ +V A  ++  + + R++     +     D  L    ++MYAKCG + S+   F
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + +SW+ +++   ++    K L  FR M  SG   D ++L+S + A      L+
Sbjct: 318 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLT 377

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + +HA     G   +  + V N L+  YS    ++ A   F GM  +D VSW+ ++ G
Sbjct: 378 QVRQVHAQASVHGMLQN--LIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435

Query: 252 FALNGKFEEAFDLLHEM-------------------------QLMRS--VEPDIATVVTL 284
           FA  G +   F    E+                           MR   V PD   +VT+
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  CA    + + R++  Y  R+    D+++  +++D ++K   +  A  +F+ +   N 
Sbjct: 496 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN- 554

Query: 345 LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           ++SW++MI+             LF  ML      +  TL+++L +C+    +E G     
Sbjct: 555 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 614

Query: 393 --WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
             W+       +      ++ +    G L  A  L++ ++   D   W   + AC  +  
Sbjct: 615 LMWE-DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673

Query: 451 FQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLELAFEGKSL 493
              A K   S+ + Q  +P   + L N+ +  G  E   + + L
Sbjct: 674 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDL 717



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/410 (23%), Positives = 177/410 (43%), Gaps = 40/410 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           + F   +   T+++  Y+     ES+  +F     K+V++W+AMI A   +      L  
Sbjct: 288 KKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 347

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M+  G+  D  TL  ++ A      L Q R VH  +   GM+ +  + N  V+ Y+ 
Sbjct: 348 FRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSY 407

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN------ 174
              L+ +   F GM   D+VSW+ ++ G         C   FRE+   G + DN      
Sbjct: 408 YRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFC 467

Query: 175 ----------------------VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
                                 V++ + V A A LG +   + I     +  ++    V 
Sbjct: 468 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLD--VI 525

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           +  ++I M+++CG +E+A   F  M  K+V+SW+A+I  +  +G+  +A DL   M L  
Sbjct: 526 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-PMMLRS 584

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSV-----HGYAIRRLLGYDLLMMNSLMDFYSKSN 327
            + P+  T+V+L+  C+ + L+ EG          Y++R     D+     ++D   ++ 
Sbjct: 585 GILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRA----DVKHYTCVVDLLGRAG 640

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPS 377
            L +A  L  ++    D   W + +         + ++ + ++LL + P 
Sbjct: 641 RLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQ 690


>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 173/585 (29%), Positives = 293/585 (50%), Gaps = 101/585 (17%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P    V + +S C     +  GR  H + ++  LG D  +  SL+D Y+K   +  A  +
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 336 FNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ----------FSFSTLLAILPSCNS 380
           ++ +  + D  + N +IS     G F +   +  Q          +++ST+LA+   C +
Sbjct: 171 YDKMTSL-DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAV---CGT 226

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +++ GK +H   +K+ + + T   NAL+ +Y  CG +  A  + + +   +  S W  
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIIS-WTA 285

Query: 441 VIVACTQNGHFQEAIKTFKSMTQ--------------------------QQNAS------ 468
            I    Q+G F++A+K F  M +                          Q+ +S      
Sbjct: 286 SINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQ 345

Query: 469 ----------------------PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
                                 P+   L +++ ACG+L     G+++H + LK+    D 
Sbjct: 346 HLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDA 405

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            + +ALI MY +C  ++ A  VF+  +  N+ +WN +I+ FSQ   +           F 
Sbjct: 406 YIISALIYMYSKCGHVEKACRVFD--WIPNVVSWNTLIAGFSQMLDQ----------GFC 453

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           P+ ++I S+L ACT +  LRHGK+IHG+   +G +++ ++ SAL+DMY+ C         
Sbjct: 454 PSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKIL 513

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
                 ++   W+S+I  Y  HG   EAIELF++M  S  +    +  ++L+ACSH+G+V
Sbjct: 514 FYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMV 573

Query: 672 DEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLS 731
           + G   +  M E+Y + P  EH+ C+VD+LGR+GKL EAY+ IK +P++P   VWGA+L 
Sbjct: 574 ELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 633

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           AC +HG+ ++ +  AE LF+LEPE+ G  + LSN+Y   GRW +A
Sbjct: 634 ACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNA 678



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 143/599 (23%), Positives = 273/599 (45%), Gaps = 104/599 (17%)

Query: 79  IVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           + SAL+   +  C++ GR  HC  +K G+ +D  +C   ++MYAKCG+++S+   +  M 
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             D  + N ++S    N +  +    F ++G  G + ++ + S+ +A    +  +  GK 
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +HA  +K+ Y      +V N+L+++YS+CG +E AE  F  +  ++++SW A I+GF  +
Sbjct: 236 LHAHVVKMQYLSE--TAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQH 293

Query: 256 GKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSL--------------------- 292
           G F++A   L +  +MR   +EP+  T   +++ C   L                     
Sbjct: 294 GDFKKA---LKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSI 350

Query: 293 -LLRE---------------------------------GRSVHGYAIRRLLGYDLLMMNS 318
            LLR+                                 G ++H   ++     D  ++++
Sbjct: 351 FLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 410

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSC 378
           L+  YSK   + KA  +F+ I    ++VSWN++I+G F +ML      S  T+ ++LP+C
Sbjct: 411 LIYMYSKCGHVEKACRVFDWIP---NVVSWNTLIAG-FSQMLDQGFCPSSVTISSLLPAC 466

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +  +L  GK IH + + +G   +    +AL+ MY  CG +  A  +L  +    +T  W
Sbjct: 467 TNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEA-KILFYMMPERNTVTW 525

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I     +G+  EAI+ F  M ++ +   D +T   V++AC +  +   G+SL    +
Sbjct: 526 NSLIFGYANHGYCNEAIELFNQM-EESDTKLDHLTFTAVLNACSHAGMVELGESLF-RKM 583

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +    ++ R+++                             + CM+    +      A +
Sbjct: 584 QEKYRIEPRLEH-----------------------------YACMVDLLGRAGKLSEAYD 614

Query: 559 LFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL-DMYSN 616
           L + +  EP++    ++L AC   G +   +    H+F L  +  S  SS LL ++Y++
Sbjct: 615 LIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFEL--EPESPGSSLLLSNLYAD 671



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/521 (21%), Positives = 230/521 (44%), Gaps = 53/521 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y+     +S++ ++ +  + D  T N +I+A   N   V     F ++   G R
Sbjct: 152 TSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTR 211

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T   +++    ++ +++G+ +H   +K   ++++++ N  + +Y+KCG +  +E  
Sbjct: 212 PNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIV 271

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC-LGE 189
           F  +   + +SW   ++G   +   +K L  F  M  SG + +  + S  +A+  C LG+
Sbjct: 272 FENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGK 331

Query: 190 LSYGKV-------IHALGI----KLGYEDSPYVSVTNS---LISMYSQCGDIEAAERAFW 235
               +         H + I    K+  E +   S+  +   L S+   CG + +  R   
Sbjct: 332 WMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHL-SDRRTGE 390

Query: 236 GMTC--------KDVVSWNAIIDGFALNGKFEEA---FDLLHEM------------QLMR 272
            M           D    +A+I  ++  G  E+A   FD +  +             L +
Sbjct: 391 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPNVVSWNTLIAGFSQMLDQ 450

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
              P   T+ +L+  C +   LR G+ +HGYA+   +  D+ + ++L+D Y+K   +S+A
Sbjct: 451 GFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEA 510

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
           ++LF  + P  + V+WNS+I G            LF +M    ++    T  A+L +C+ 
Sbjct: 511 KILF-YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSH 569

Query: 381 PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
              +E G+S+    Q K            ++ +    G L  A+ L++ +    D   W 
Sbjct: 570 AGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 629

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            ++ AC  +G+ + A    + + + +  SP S  L++ + A
Sbjct: 630 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYA 670



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 184/455 (40%), Gaps = 97/455 (21%)

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           G F    Y+ S  SF         C     +E G+  HC+ +K+G  ++     +L+ MY
Sbjct: 108 GGFPHRQYVFSALSF---------CGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMY 158

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG++ +A  +  +++     +C N +I A  +NG F +A + F  +       P+  T
Sbjct: 159 AKCGEVDSAVRVYDKMTSLDAATC-NCLISAYARNGFFVQAFQVFMQIG-NMGTRPNHYT 216

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
              +++ CG +    EGK LH   +K     +T V NAL+T+Y +C  ++ A  VFE+  
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLG 276

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACT-QLG------ 583
             N+ +W   I+ F Q+    +AL+ F   R    EPNE +   +L++C   LG      
Sbjct: 277 QRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQR 336

Query: 584 -----------------------------------VLRHGKQIHGHV--------FHLGF 600
                                              VL    +  GH+         H   
Sbjct: 337 TSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVI 396

Query: 601 QENSF-----ISSALLDMYSNC-------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            +NSF     I SAL+ MYS C              +  +W+++I+              
Sbjct: 397 LKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIPNVVSWNTLIAG------------- 443

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M + G  P+  ++ SLL AC++   +  G + +   +    V  +      +VDM  
Sbjct: 444 FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM-VIGVEKDVYVRSALVDMYA 502

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           + G + EA      +P +     W +++   ++HG
Sbjct: 503 KCGYISEAKILFYMMP-ERNTVTWNSLIFGYANHG 536


>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
 gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
           from Arabidopsis thaliana gb|AC008153 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
 gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 558

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 278/526 (52%), Gaps = 36/526 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP- 341
            L+++ + +  L   + VH   I      ++++ +SL + Y +SN L  A   FN I   
Sbjct: 9   ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68

Query: 342 MNDLVSWNSMISG--------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
             +  SWN+++SG              L+  M   C       L+  + +C     LE G
Sbjct: 69  KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             IH   +K G   +     +L+ MY   G + +A  +   I    ++  W +++    +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLMKGYLK 187

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDT 506
                E  + F  + +    + D++TL+ ++ ACGN+     GK +HG++++ S +    
Sbjct: 188 YSKDPEVFRLF-CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            +Q ++I MY +CR + +A  +FE+  + N+  W  +IS F++ +  V A +LFR +  E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306

Query: 567 ---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              PN+ ++ +IL +C+ LG LRHGK +HG++   G + ++   ++ +DMY+ C      
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    ++  +WSSMI+A+G +G   EA++ FH+M +  + P   + +SLLSACSHS
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           G V EG + + +M  +Y V PE EH+ C+VD+LGR+G++ EA  FI N+P++P    WGA
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +LSAC  H +  +  ++AE L  +EPE    Y+ LSN+Y   G W+
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 258/551 (46%), Gaps = 39/551 (7%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC-- 136
           +++ L+Q   L   + VH   I  G   +  L +   N Y +   L+ +  +F+ + C  
Sbjct: 10  LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69

Query: 137 ADTVSWNTIMSGCLHNN---YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
            +  SWNTI+SG   +    Y +  LLY R M    +  D+ +L  A+ A   LG L  G
Sbjct: 70  RNRHSWNTILSGYSKSKTCCYSDVLLLYNR-MRRHCDGVDSFNLVFAIKACVGLGLLENG 128

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
            +IH L +K G +   YV+   SL+ MY+Q G +E+A++ F  +  ++ V W  ++ G+ 
Sbjct: 129 ILIHGLAMKNGLDKDDYVA--PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186

Query: 254 LNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLG 310
              K  E F L     LMR   +  D  T++ L+  C +    + G+ VHG +IRR  + 
Sbjct: 187 KYSKDPEVFRLF---CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
               +  S++D Y K   L  A  LF      N +V W ++ISG            LF++
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRN-VVMWTTLISGFAKCERAVEAFDLFRQ 302

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML      +  TL AIL SC+S  SL  GKS+H + ++ G   + +   + + MY  CG+
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A ++   +   +  S W+ +I A   NG F+EA+  F  M + QN  P+SVT V+++
Sbjct: 363 IQMARTVFDMMPERNVIS-WSSMINAFGINGLFEEALDCFHKM-KSQNVVPNSVTFVSLL 420

Query: 479 SACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           SAC +     EG K    +     +  +      ++ + GR  +I  A +  ++     +
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480

Query: 538 CT-WNCMISAFSQNKAEVRALELF-RHLEFEPNEISIVSILSAC-------TQLGVLRHG 588
            + W  ++SA   +K    A E+  + L  EP + S+  +LS           +  +R  
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRK 540

Query: 589 KQIHGHVFHLG 599
             I G+  H+G
Sbjct: 541 MGIKGYRKHVG 551



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 125/504 (24%), Positives = 226/504 (44%), Gaps = 23/504 (4%)

Query: 2   GFLAHLPTSTSLLTAY--SNVSYFESSLALFYETCNKDVVTWNAMITACVENR--CVVMG 57
           GF   +   +SL  AY  SN   F +S         ++  +WN +++   +++  C    
Sbjct: 34  GFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDV 93

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  +  M       DS  L+  + A   +  L+ G ++H L++K G+  D  +    V M
Sbjct: 94  LLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEM 153

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+ G + S++  F  +   ++V W  +M G L  +   +    F  M  +G   D ++L
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              V A   +     GK +H + I+  + D S Y+    S+I MY +C  ++ A + F  
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA--SIIDMYVKCRLLDNARKLFET 271

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
              ++VV W  +I GFA   +  EAFDL  +M L  S+ P+  T+  ++  C+    LR 
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRH 330

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM----- 351
           G+SVHGY IR  +  D +   S +D Y++  ++  A  +F+ + P  +++SW+SM     
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD-MMPERNVISWSSMINAFG 389

Query: 352 ISGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
           I+GLF+E L    +           T +++L +C+   +++ G K         G     
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMT 462
                ++ +    G++  A S +  +      S W  ++ AC  +     A +   K ++
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509

Query: 463 QQQNASPDSVTLVNVISACGNLEL 486
            +   S   V L N+ +  G  E+
Sbjct: 510 MEPEKSSVYVLLSNIYADAGMWEM 533


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 190/640 (29%), Positives = 313/640 (48%), Gaps = 50/640 (7%)

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            + A A  AC G    G  IH  G  + +E      V+NSL++MY + G    A   F  
Sbjct: 67  FTVANALKACRGYPLLGSQIH--GFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFEN 124

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC---ADSLL 293
           +T  D+VSWN ++ G   +   E+AF    +M     V  D  T  T++S C    ++  
Sbjct: 125 LTHPDIVSWNTVLSGCQTS---EDAFSFACKMN-SSGVVFDAVTYTTVLSFCWRHVEAYF 180

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G  +H   ++     ++ + N+L+  YS+   L +A  +F  +    DLVSWN+MIS
Sbjct: 181 LI-GLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKT-RDLVSWNAMIS 238

Query: 354 GLFKEMLYLCSQFSF-------------STLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           G  +E +Y     S               +  + + +C   ++LE  + IH   +K    
Sbjct: 239 GYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHE 298

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +    N L+  Y  C  +  A  + Q ++  +  S W  +I          EA+  F  
Sbjct: 299 KHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVS-WTTMISIDEA-----EAVSFFNE 352

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           M +     P+ VT V +I A    EL  +GK +HG   K+     + V N++ITMY + +
Sbjct: 353 M-RLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFK 411

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH--LEFEPNEISIVSILSA 578
            ++ +  VF+     ++  WN +IS F  N     A+  F    +E +PN+ S  SIL+A
Sbjct: 412 SMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNA 471

Query: 579 --CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN----CKSNA----------- 621
               +   L++G++ H  +  LG   +  +SSALLDMY+     C+S             
Sbjct: 472 IGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQF 531

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           AW+++ISAY  HG     +  F EM    +RP   + +S+L+AC   G+VD G   + +M
Sbjct: 532 AWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSM 591

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           +++Y + P  EH+ C+VDMLGR+G+L+EA   + ++P  P   V  ++L AC  HG+  M
Sbjct: 592 VKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDM 651

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           G++VA+ L ++EP   G Y+ +SN+Y  +G+W+   ++ K
Sbjct: 652 GERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRK 691



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 171/647 (26%), Positives = 296/647 (45%), Gaps = 51/647 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G  +H  SI    +  + + N  +NMY K G    + C F  +   D VSWNT++SGC  
Sbjct: 83  GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGC-- 140

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS----YGKVIHALGIKLGYED 207
               E    +  +M  SG   D V+ ++ +  S C   +      G  +H+  +K G++ 
Sbjct: 141 -QTSEDAFSFACKMNSSGVVFDAVTYTTVL--SFCWRHVEAYFLIGLQLHSCIVKFGFDC 197

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE-EAFDLLH 266
             +V   N+LISMYS+ G +  A R F  M  +D+VSWNA+I G++  G +  EA  +  
Sbjct: 198 EVFVG--NALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMF- 254

Query: 267 EMQLMR-SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            +Q+ R  +E D  +  + +S C     L   R +HG +I+      + + N L+  Y K
Sbjct: 255 -LQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFK 313

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFSTLLAILPSC 378
              +  A L+F  +   N +VSW +MIS         F EM       +  T + ++ + 
Sbjct: 314 CQVIEDARLVFQNMNERN-VVSWTTMISIDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAI 372

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
              E +  GK +H +  K GFS+ +   N+++ MY     +  +  + Q + +  D   W
Sbjct: 373 TIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQ-DIIAW 431

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKSLHGLA 497
           N +I     NG  QEAI+ F S   +   +  S  +++N I A  ++ L + G+  H   
Sbjct: 432 NALISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAIGAAEDVSLKY-GQRCHSQI 490

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEV 554
           +K  +  D  V +AL+ MY +   I  +  VF      +   W  +ISA++++   ++ +
Sbjct: 491 IKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVM 550

Query: 555 RALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
              E  R LE  P+ I+ +SIL+AC + G++  G  + G               +++  Y
Sbjct: 551 NWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFG---------------SMVKDY 595

Query: 615 SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
               S   +S ++   G  G+  EA  L   +      P  S + SLL AC   G VD G
Sbjct: 596 QIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGG---PGLSVLQSLLGACRVHGNVDMG 652

Query: 675 LQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
            +  + ++E   + P E+  +V + ++    GK +   +  K + ++
Sbjct: 653 ERVADALME---MEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVK 696



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 250/545 (45%), Gaps = 53/545 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S SL+  Y     F  +L +F    + D+V+WN +++ C  +        F  +M   G
Sbjct: 101 VSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSE---DAFSFACKMNSSG 157

Query: 69  IRFDSTTLLIIVSALTQMNCLKQ-------GRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           + FD+ T   ++S      C +        G  +H   +K G   +  + N  ++MY++ 
Sbjct: 158 VVFDAVTYTTVLSF-----CWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRW 212

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQADNVSLSSA 180
           G L  +   F  M   D VSWN ++SG      Y  + +  F +M   G + D +S +SA
Sbjct: 213 GHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSA 272

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           V+A      L   + IH L IK  +E   +V+V+N LIS Y +C  IE A   F  M  +
Sbjct: 273 VSACGYEKNLELARQIHGLSIKTRHEK--HVAVSNVLISTYFKCQVIEDARLVFQNMNER 330

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW  +I     +    EA    +EM+L   V P+  T V LI       L+ +G+ V
Sbjct: 331 NVVSWTTMI-----SIDEAEAVSFFNEMRL-DGVYPNDVTFVGLIHAITIGELVVQGKMV 384

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
           HG+  +        + NS++  Y+K  S+  +  +F  +    D+++WN++ISG     L
Sbjct: 385 HGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQEL-KYQDIIAWNALISGFVHNGL 443

Query: 361 --------------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                            +Q+SF ++L  + +     SL++G+  H   +KLG + + I  
Sbjct: 444 CQEAIRAFFSGLIESKPNQYSFGSILNAIGAAEDV-SLKYGQRCHSQIIKLGLNTDPIVS 502

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +AL+ MY   G +  +  +       S  + W  +I A  ++G ++  +  F+ M ++  
Sbjct: 503 SALLDMYAKRGSICESQKVFVETPQQSQFA-WTTIISAYARHGDYESVMNWFEEM-RRLE 560

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA------LITMYGRCR 520
             PDS+T +++++ACG   +   G  L G  +K     D +++ +      L+ M GR  
Sbjct: 561 VRPDSITFLSILTACGRRGMVDMGCHLFGSMVK-----DYQIEPSAEHYSCLVDMLGRAG 615

Query: 521 DIKSA 525
            ++ A
Sbjct: 616 RLEEA 620



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 231/507 (45%), Gaps = 37/507 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHF 60
           GF   +    +L++ YS   +   +  +F E   +D+V+WNAMI+    E    +  +  
Sbjct: 194 GFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISM 253

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M   G+  D  +    VSA      L+  R +H LSIK       ++ NV ++ Y K
Sbjct: 254 FLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFK 313

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C  +  +   F  M+  + VSW T++S         + + +F EM   G   ++V+    
Sbjct: 314 CQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGL 368

Query: 181 VAASACLGELSY-GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + A   +GEL   GK++H    K G+  S   +V NS+I+MY++   ++ + + F  +  
Sbjct: 369 IHA-ITIGELVVQGKMVHGFCTKTGF--SSKSNVCNSIITMYAKFKSMQDSVKVFQELKY 425

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL--CADSLLLREG 297
           +D+++WNA+I GF  NG  +EA        L+ S +P+  +  ++++    A+ + L+ G
Sbjct: 426 QDIIAWNALISGFVHNGLCQEAIRAFFS-GLIES-KPNQYSFGSILNAIGAAEDVSLKYG 483

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
           +  H   I+  L  D ++ ++L+D Y+K  S+ +++ +F    P     +W ++IS    
Sbjct: 484 QRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVF-VETPQQSQFAWTTIISAYAR 542

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFS 400
                     F+EM  L  +    T L+IL +C     ++     FG  +  +Q++    
Sbjct: 543 HGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAE 602

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
           +     + L+ M    G L  A  L+  I      S    ++ AC  +G+     +   +
Sbjct: 603 H----YSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADA 658

Query: 461 MTQQQNASPDSVTLV-NVISACGNLEL 486
           + + +     S  L+ N+ +  G  E+
Sbjct: 659 LMEMEPTESGSYVLMSNLYAEIGKWEM 685


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/432 (35%), Positives = 233/432 (53%), Gaps = 20/432 (4%)

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L++ ML   S     +   IL SC S      G+ +HC  ++ G       + AL+ MY 
Sbjct: 37  LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYC 96

Query: 415 NCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            CG +  A  + +   H+S    C+N +I   T N    +A   F+ M ++   S DSVT
Sbjct: 97  KCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRM-KETGVSVDSVT 155

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++ ++  C   E  + G+SLHG  +K     +  V N+ ITMY +C  ++S   +F+   
Sbjct: 156 ILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMP 215

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
              L TWN +IS +SQN      LELF  ++     P+  ++VS+LS+C  LG  + G++
Sbjct: 216 VKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQE 275

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +   V   GF  N F+S+AL+ MY+ C               KS  +W++MI  YG HG 
Sbjct: 276 VGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 335

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G   + LF +M   GIRP  +  + +LSACSHSGL D+GL+ +  M  EY + P  EH+ 
Sbjct: 336 GETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 395

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR+G+L EA EFI ++P++P   VWGA+L AC  H +  M +     + + EP 
Sbjct: 396 CLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPM 455

Query: 756 NVGYYISLSNMY 767
           N+GYY+ +SN+Y
Sbjct: 456 NIGYYVLMSNIY 467



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 8/346 (2%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDV--VTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+L++ Y      E +  +F E  +     V +NA+I+    N  V      F  M E G
Sbjct: 89  TALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETG 148

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  DS T+L +V   T    L  GR +H   +K G  ++ ++ N F+ MY KCG + S  
Sbjct: 149 VSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGR 208

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M     ++WN ++SG   N      L  F +M  SG   D  +L S +++ A LG
Sbjct: 209 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLG 268

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               G+ +  L    G+  +P V ++N+LISMY++CG++  A   F  M  K +VSW A+
Sbjct: 269 AKKIGQEVGELVEANGF--APNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAM 326

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           I  + ++G  E    L  +M + R + PD A  V ++S C+ S L  +G  +   A++R 
Sbjct: 327 IGCYGMHGMGETGLTLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKRE 384

Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             L       + L+D   ++  L +A    +++    D   W +++
Sbjct: 385 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALL 430



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 195/427 (45%), Gaps = 31/427 (7%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
           +WN  +            +  +  M+  G   D+ +   I+ +   ++    G+ +HC  
Sbjct: 17  SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTF-SGMHCADT-VSWNTIMSGCLHNNYPEK 157
           I+ G  A+  +    ++MY KCG +  +   F    H +   V +N ++SG   N+    
Sbjct: 77  IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
               FR M  +G   D+V++   V        L  G+ +H   +K G      V+V NS 
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSE--VAVLNSF 194

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VE 275
           I+MY +CG +E+  R F  M  K +++WNA+I G++ NG    A+D+L   + M+S  V 
Sbjct: 195 ITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGL---AYDVLELFEQMKSSGVC 251

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           PD  T+V+++S CA     + G+ V           ++ + N+L+  Y++  +L+KA  +
Sbjct: 252 PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAV 311

Query: 336 FNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN---- 379
           F+ I P+  LVSW +MI              LF +M+    +   +  + +L +C+    
Sbjct: 312 FD-IMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGL 370

Query: 380 SPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           + + LE  +++   ++L+ G  + +     L+ +    G L  A   +  +    D + W
Sbjct: 371 TDKGLELFRAMKREYKLEPGPEHYS----CLVDLLGRAGRLDEAMEFIDSMPVEPDGAVW 426

Query: 439 NIVIVAC 445
             ++ AC
Sbjct: 427 GALLGAC 433



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 4/250 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +    S +T Y      ES   LF E   K ++TWNA+I+   +N      L  F
Sbjct: 183 GTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELF 242

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D  TL+ ++S+   +   K G+ V  L    G   +  L N  ++MYA+C
Sbjct: 243 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARC 302

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G+L  +   F  M     VSW T M GC   +   E  L  F +M   G + D       
Sbjct: 303 GNLAKARAVFDIMPVKSLVSW-TAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMV 361

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G    G  +    +K  Y+  P     + L+ +  + G ++ A      M  +
Sbjct: 362 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVE 420

Query: 241 -DVVSWNAII 249
            D   W A++
Sbjct: 421 PDGAVWGALL 430


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/601 (27%), Positives = 301/601 (50%), Gaps = 35/601 (5%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
           P   + +SL+++Y +C  ++ A +    M  +DV  WN  +         +EA  L + M
Sbjct: 22  PDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLM 81

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +  R +  +     +LIS  A       G S+H    +     D+L+ N+ +  Y K+ S
Sbjct: 82  RHTR-IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQS 140

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
           +      F A+  + +L S N+++SG            +  ++L    + +  T ++IL 
Sbjct: 141 VENGWQFFKAMM-IENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILK 199

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C S   L  GK+IH   +K G + ++   N+L+++Y  CG    A  +   I    D  
Sbjct: 200 TCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER-DVV 258

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I      G +   ++ F  M  +   +P+  T ++++ +C +L     GK +H  
Sbjct: 259 SWTALITGFVAEG-YGSGLRIFNQMLAE-GFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 316

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
            +K+ +  +  V  AL+ MY + R ++ A T+F      +L  W  +++ ++Q+    +A
Sbjct: 317 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 376

Query: 557 LELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           ++ F  ++ E   PNE ++ S LS C+++  L  G+Q+H      G   + F++SAL+DM
Sbjct: 377 VKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDM 436

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y+ C               +   +W+++I  Y  HG+G +A++ F  M + G  P + + 
Sbjct: 437 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTF 496

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           I +LSACSH GL++EG +++N++ + Y + P  EH+ C+VD+LGR+GK  E   FI+ + 
Sbjct: 497 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 556

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           +     +W  +L AC  HG+ + G++ A  LF+LEPE    YI LSNM+ A G W D   
Sbjct: 557 LTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTN 616

Query: 779 I 779
           +
Sbjct: 617 V 617



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 173/680 (25%), Positives = 326/680 (47%), Gaps = 59/680 (8%)

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP-EKC 158
           IK G+  DS L +  VN+Y KC  L  +      M   D   WN  +S   ++ YP ++ 
Sbjct: 16  IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSA-NSPYPLQEA 74

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           +  F  M  +  + +    +S ++A+A LG+  YG+ IHA   K G+E    + ++N+ +
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD--ILISNAFV 132

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           +MY +   +E   + F  M  +++ S N ++ GF      ++   +L ++ L+   EP++
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQL-LVEGFEPNM 191

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T ++++  CA    L EG+++HG  I+  +  D  + NSL++ Y+K  S + A  +F  
Sbjct: 192 YTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251

Query: 339 IAPMNDLVSWNSMISG-----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
           I P  D+VSW ++I+G           +F +ML      +  T ++IL SC+S   ++ G
Sbjct: 252 I-PERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K +H   +K     N     AL+ MY     L  A ++  R+    D   W +++    Q
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDLFAWTVIVAGYAQ 369

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +G  ++A+K F  M Q++   P+  TL + +S C  +     G+ LH +A+K+    D  
Sbjct: 370 DGQGEKAVKCFIQM-QREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 428

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           V +AL+ MY +C  ++ A  VF+   + +  +WN +I  +SQ+    +AL+ F  +  E 
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEG 488

Query: 567 --PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWS 624
             P+E++ + +LSAC+ +G++  GK+      H          ++L  +Y    +   ++
Sbjct: 489 TVPDEVTFIGVLSACSHMGLIEEGKK------HF---------NSLSKIYGITPTIEHYA 533

Query: 625 SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI--SLLSACSHSGLVDEGLQYYNNML 682
            M+   G  GK  E      EM     + T + +I  ++L AC   G ++ G +     +
Sbjct: 534 CMVDILGRAGKFHEVESFIEEM-----KLTSNVLIWETVLGACKMHGNIEFGER---AAM 585

Query: 683 EEYDVRPETE-HHVCIVDMLGRSG---KLQEAYEFIKNLPIQPKPG-----VWGAMLSAC 733
           + +++ PE + +++ + +M    G    +      +    ++ +PG     V G +    
Sbjct: 586 KLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFL 645

Query: 734 SHHGDTKMGKQVAELLFKLE 753
           SH G      ++ E+  KL+
Sbjct: 646 SHDGSH---PKIREIHLKLQ 662



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 258/576 (44%), Gaps = 30/576 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +SL+  Y      + +  +  E   +DV  WN  +++      +   +  F  M    IR
Sbjct: 28  SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIR 87

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +      ++SA   +     G  +H    K G  +D  + N FV MY K   + +    
Sbjct: 88  LNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   +  S N ++SG       ++      ++   G + +  +  S +   A  G+L
Sbjct: 148 FKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDL 207

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           + GK IH   IK G   +P   + NSL+++Y++CG    A + F  +  +DVVSW A+I 
Sbjct: 208 NEGKAIHGQVIKSGI--NPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           GF   G +     + ++M L     P++ T ++++  C+    +  G+ VH   ++  L 
Sbjct: 266 GFVAEG-YGSGLRIFNQM-LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLD 323

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKE 358
            +  +  +L+D Y+K+  L  AE +FN +    DL +W  +++G             F +
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDAETIFNRLIK-RDLFAWTVIVAGYAQDGQGEKAVKCFIQ 382

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M     + +  TL + L  C+   +L+ G+ +H   +K G S +    +AL+ MY  CG 
Sbjct: 383 MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGC 442

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +  A  +   +  + DT  WN +I   +Q+G   +A+K F++M  +    PD VT + V+
Sbjct: 443 VEDAEVVFDGLV-SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV-PDEVTFIGVL 500

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNC 535
           SAC ++ L  EGK  H  +L  + G+   +++   ++ + GR        +  E      
Sbjct: 501 SACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTS 559

Query: 536 NLCTWNCMISAFSQNK----AEVRALELFRHLEFEP 567
           N+  W  ++ A   +      E  A++LF   E EP
Sbjct: 560 NVLIWETVLGACKMHGNIEFGERAAMKLF---ELEP 592



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 212/464 (45%), Gaps = 18/464 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  S + +T Y      E+    F     +++ + N +++   +      G    
Sbjct: 120 GFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRIL 179

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +++ EG   +  T + I+        L +G+ +H   IK+G+  DS L N  VN+YAKC
Sbjct: 180 IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 239

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G  N +   F  +   D VSW  +++G +   Y    L  F +M   G   +  +  S +
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISIL 298

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + + L ++  GK +HA  +K   + + +V    +L+ MY++   +E AE  F  +  +D
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT--ALVDMYAKNRFLEDAETIFNRLIKRD 356

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + +W  I+ G+A +G+ E+A     +MQ    V+P+  T+ + +S C+    L  GR +H
Sbjct: 357 LFAWTVIVAGYAQDGQGEKAVKCFIQMQ-REGVKPNEFTLASSLSGCSRIATLDSGRQLH 415

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
             AI+     D+ + ++L+D Y+K   +  AE++F+ +    D VSWN++I G       
Sbjct: 416 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS-RDTVSWNTIICGYSQHGQG 474

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                 F+ ML   +     T + +L +C+    +E GK       K+     TI   A 
Sbjct: 475 GKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYAC 534

Query: 410 M-HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
           M  +    G      S ++ +   S+   W  V+ AC  +G+ +
Sbjct: 535 MVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE 578



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 5/277 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+   + E +  +F     +D+  W  ++    ++      +  F +M  EG++
Sbjct: 330 TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 389

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  TL   +S  +++  L  GR +H ++IKAG   D  + +  V+MYAKCG +  +E  
Sbjct: 390 PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 449

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F G+   DTVSWNTI+ G   +    K L  F  M   G   D V+    ++A + +G +
Sbjct: 450 FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 509

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
             GK  H   +   Y  +P +     ++ +  + G     E     M    +V+ W  ++
Sbjct: 510 EEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVL 568

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
               ++G  E  F     M+L   +EP+I +   L+S
Sbjct: 569 GACKMHGNIE--FGERAAMKLFE-LEPEIDSNYILLS 602


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 276/512 (53%), Gaps = 34/512 (6%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L+  + +H   I   L ++  + NSLM+ Y     L+ A+ +F+   P  ++VSW  +IS
Sbjct: 37  LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHH-TPYKNVVSWTILIS 95

Query: 354 GL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           GL            F+EM+    + +  T+ ++LP+  +   +   KS+HC+ ++ GF  
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N     AL+ MY   G +  A  L + +S   +   WN ++   + +G  +EAI  F  M
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +++    D  T++++I A  ++     G  +HG  +++    D  ++ AL+ +Y     
Sbjct: 215 -RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILS 577
           +  A  VF      ++  W  M++ FS  +   RA++ F  +      + + I+++ ILS
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C+  G L+ G+++H       F  N F+ SA++DMY+NC               K    
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI+  G +G G +AI+LF +M  SG+ P +S+ +S+L ACSH+G+V EGLQ + +M+
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +   V P  +H+ C++D+LGR+G+L  AY FI N+P QP   V+  +L AC  HG+ K+G
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
            ++++ +F++EP + GYY+ LSNMY   G W+
Sbjct: 514 HEISQKIFEMEPNDAGYYVLLSNMYALAGNWE 545



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 248/531 (46%), Gaps = 49/531 (9%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           S L ++  LK  + +H   I +G+  ++ L N  +N Y  CG L  ++  F      + V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW  ++SG   N+   + +  FREM     + + V++SS + A A LG +   K +H   
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           ++ G+E +  V V  +L+ MYS+ G +  A + F  M+ ++VV+WNAI+ G++ +G  EE
Sbjct: 149 VRGGFEGN--VFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEE 206

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A DL + M+  + +  D  T+++LI        L+ G  +HG+ IR     D  +  +LM
Sbjct: 207 AIDLFNLMR-RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS-QFS 367
           D Y   N +  A  +F+ ++ + D+ +W  M++G             F +ML + + +  
Sbjct: 266 DIYVSHNCVDDAHRVFSEMS-VKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
              L+ IL SC+   +L+ G+ +H   +K  F+NN    +A++ MY NCG+L  A     
Sbjct: 325 SIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +    D  CWN +I     NG+  +AI  F  M +     PD  T V+V+ AC +  + 
Sbjct: 385 GMG-EKDVVCWNAMIAGNGMNGYGTDAIDLFLQM-KGSGLDPDESTFVSVLYACSHAGMV 442

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           +EG  +    +K+                         S V       NL  + C+I   
Sbjct: 443 YEGLQIFYHMVKT-------------------------SHVIP-----NLQHYACVIDIL 472

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +      A     ++ F+P+     ++L AC   G ++ G +I   +F +
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEM 523



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 232/490 (47%), Gaps = 17/490 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S SL+ AY        +  +F+ T  K+VV+W  +I+   +N C V  +  F EM+    
Sbjct: 59  SNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNF 118

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + ++ T+  ++ A   +  ++  + VHC  ++ G   +  +    V+MY+K G +  +  
Sbjct: 119 KPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQ 178

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + V+WN I+SG   + + E+ +  F  M   G   D  ++ S + AS  +G 
Sbjct: 179 LFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGC 238

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  IH   I+ GYE+  ++    +L+ +Y     ++ A R F  M+ KDV +W  ++
Sbjct: 239 LQVGTGIHGFIIRTGYENDKHIKT--ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLML 296

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF+    ++ A    ++M  +++++ D   ++ ++S C+ S  L++GR VH  AI+   
Sbjct: 297 TGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCF 356

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ + ++++D Y+   +L  A+  F  +    D+V WN+MI+G            LF 
Sbjct: 357 ANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-KDVVCWNAMIAGNGMNGYGTDAIDLFL 415

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS-NNTIGVNALMHMYINC 416
           +M         ST +++L +C+    +  G  I    +K      N      ++ +    
Sbjct: 416 QMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRA 475

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLV 475
           G L AA+S +  +    D   ++ ++ AC  +G+ +   +  + + + + N +   V L 
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLS 535

Query: 476 NVISACGNLE 485
           N+ +  GN E
Sbjct: 536 NMYALAGNWE 545



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 162/306 (52%), Gaps = 4/306 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   T+L+  YS       +  LF     ++VVTWNA+++   ++      +  F
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF 211

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  D  T++ ++ A   + CL+ G  +H   I+ G   D  +    +++Y   
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSA 180
             ++ +   FS M   D  +W  +++G     + ++ + +F +M G    + D+++L   
Sbjct: 272 NCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGI 331

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++ +  G L  G+ +HAL IK  + ++ +V   +++I MY+ CG++E A+R F+GM  K
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVG--SAVIDMYANCGNLEDAKRFFYGMGEK 389

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV WNA+I G  +NG   +A DL  +M+    ++PD +T V+++  C+ + ++ EG  +
Sbjct: 390 DVVCWNAMIAGNGMNGYGTDAIDLFLQMK-GSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 301 HGYAIR 306
             + ++
Sbjct: 449 FYHMVK 454



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 26/202 (12%)

Query: 557 LELFRHLEFEPNE-ISIVSILSACT--QLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
              +RHL   P + +S ++   A    +L  L+  +QIH  +   G   N+F+S++L++ 
Sbjct: 6   FNFYRHLSSNPTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNA 65

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           Y  C               K+  +W+ +IS    +    EAI++F EM     +P   ++
Sbjct: 66  YVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTI 125

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            S+L A ++ GL+      +   +    E +V  ET     +VDM  + G +  A +  +
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET----ALVDMYSKFGCMGVARQLFE 181

Query: 716 NLPIQPKPGVWGAMLSACSHHG 737
           ++  +     W A++S  S HG
Sbjct: 182 SMS-ERNVVTWNAIVSGYSDHG 202



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F  ++   ++++  Y+N    E +   FY    KDVV WNAMI     N      +  F 
Sbjct: 356 FANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFL 415

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           +M   G+  D +T + ++ A +    + +G ++ + +   + +I +       +++  + 
Sbjct: 416 QMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRA 475

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           G L+++    + M    D   ++T++  C +H N
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGN 509


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 286/573 (49%), Gaps = 71/573 (12%)

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF--YSKSNS 328
           ++S  P    +++L+  C     + + + VH  AI++ L  + ++ N +M F    +   
Sbjct: 32  LKSFSPPTHPLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD 88

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
              A  LF+ I P  +L  WN+MI G            L+ EML    +    T   +  
Sbjct: 89  FQYARRLFDEI-PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 147

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
                 +LE+G+ +H   LK G   N     AL+ MY+ CG L  A  +   +   +D  
Sbjct: 148 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVI 206

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN++I A  + G F+E+ + F  M  +Q   P +VTLV V+SAC  L+    GK +H  
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQ-VLPTTVTLVLVLSACSKLKDLRTGKKVHSY 265

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV-- 554
                +  +  ++NA+I MY  C ++ SA  +F S  N ++ +W  ++S F+ N  E+  
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT-NLGEIDV 324

Query: 555 ------------------------------RALELFRHLE---FEPNEISIVSILSACTQ 581
                                          ALELFR+++    +P+E ++VS+L+AC  
Sbjct: 325 ARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAH 384

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           LG L  G+ I  ++     + + F+ +AL+DMY  C               +    W++M
Sbjct: 385 LGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAM 444

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I     +G G +A+++F  M  + I P + + I +LSAC+H+GLVD+G +Y+  M  ++ 
Sbjct: 445 IVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHG 504

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P   H+ C+VD+L R+G+L+EAYE I+N+PI+    VWGA+L+ C  + ++ M + V 
Sbjct: 505 IEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV 564

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + + +LEP+N   Y+ L N+Y A  RW D  E+
Sbjct: 565 KQILELEPDNGAVYVLLCNIYAACKRWNDLREL 597



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 253/565 (44%), Gaps = 58/565 (10%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM--YAKCGDLNSSECTFSGMHC 136
           ++S L     + Q + VHC +IK G+ A+  L N  +      + GD   +   F  +  
Sbjct: 42  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
            +   WNT++ G    ++P+  +  + EM   G + D  +             L YG+ +
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H   +K G + +  V V  +L+ MY  CG ++ A   F      DV++WN II  +   G
Sbjct: 162 HGHVLKHGLQYN--VFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVG 219

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           KFEE+  L   M+  + V P   T+V ++S C+    LR G+ VH Y     +  +L++ 
Sbjct: 220 KFEESRRLFLVME-DKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278

Query: 317 NSLMDFYSKSNSLSKAELLFNAI------------------------------APMNDLV 346
           N+++D Y+    +  A  +F ++                               P  D V
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338

Query: 347 SWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQ 394
           SW +MI G      FKE L L      +       T++++L +C    +LE G+ I  + 
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            +    N+    NAL+ MY  CGD+  A S+ + +S   D   W  +IV    NGH ++A
Sbjct: 399 DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGHGEKA 457

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--AL 512
           +  F +M  + +  PD +T + V+SAC +  L  +G+  + L + S  G++  + +   L
Sbjct: 458 LDMFSNML-KASILPDEITYIGVLSACTHTGLVDKGRK-YFLRMTSQHGIEPNIAHYGCL 515

Query: 513 ITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFEPNE- 569
           + +  R   +K A  V E+     N   W  +++      ++++  + + + LE EP+  
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 575

Query: 570 ---ISIVSILSACTQLGVLRHGKQI 591
              + + +I +AC +   LR  +Q+
Sbjct: 576 AVYVLLCNIYAACKRWNDLRELRQM 600



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 143/608 (23%), Positives = 251/608 (41%), Gaps = 84/608 (13%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           F+ +  LF E    ++  WN MI          +G+  + EM+  G++ D  T   +   
Sbjct: 89  FQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 148

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            T+   L+ GR +H   +K G+  +  +    V MY  CG L+++   F     AD ++W
Sbjct: 149 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 208

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH----- 197
           N I+S        E+    F  M         V+L   ++A + L +L  GK +H     
Sbjct: 209 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 268

Query: 198 -------------------------ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
                                    ALGI     +   +S T +++S ++  G+I+ A  
Sbjct: 269 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWT-TIVSGFTNLGEIDVARN 327

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M  KD VSW A+IDG+  + +F+EA +L   MQ   +V+PD  T+V++++ CA   
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQAT-NVKPDEFTMVSVLTACAHLG 386

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L  G  +  Y  R  +  DL + N+L+D Y K   + KAE +F  ++   D  +W +MI
Sbjct: 387 ALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMS-QRDKFTWTAMI 445

Query: 353 SGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL--- 397
            GL            F  ML         T + +L +C     ++ G+    + L++   
Sbjct: 446 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRK---YFLRMTSQ 502

Query: 398 -GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            G   N      L+ +    G L  A+ +++ +   +++  W  ++  C     ++E+  
Sbjct: 503 HGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRV---YRESDM 559

Query: 457 TFKSMTQQQNASPDS----VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-- 510
               + Q     PD+    V L N+ +AC         K  + L     M +D  ++   
Sbjct: 560 AEMVVKQILELEPDNGAVYVLLCNIYAAC---------KRWNDLRELRQMMMDKGIKKXP 610

Query: 511 --ALITMYGRCRDIKSASTVFESCYNCNL----CTWNCMISAFSQNKAEV--------RA 556
             +LI M GR  +  +         N +      T +  ++ +S + +EV        + 
Sbjct: 611 GCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKE 670

Query: 557 LELFRHLE 564
             +FRH E
Sbjct: 671 NSVFRHSE 678



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 186/384 (48%), Gaps = 51/384 (13%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           T+L+  Y      +++  +F + C K DV+TWN +I+A  +          F  M ++ +
Sbjct: 178 TALVQMYLLCGQLDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQV 236

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
              + TL++++SA +++  L+ G+ VH       + ++  L N  ++MYA CG+++S+  
Sbjct: 237 LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALG 296

Query: 130 TFSGMHCADTVSWNTIMSGCLH-------NNY----PEK--------------------C 158
            F  M+  D +SW TI+SG  +        NY    PEK                     
Sbjct: 297 IFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEA 356

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L  FR M  +  + D  ++ S + A A LG L  G+ I     +   ++  +V   N+LI
Sbjct: 357 LELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVR--NALI 414

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
            MY +CGD++ AE  F  M+ +D  +W A+I G A+NG  E+A D+   M L  S+ PD 
Sbjct: 415 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM-LKASILPDE 473

Query: 279 ATVVTLISLCADSLLLREGR-------SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
            T + ++S C  + L+ +GR       S HG      +  ++     L+D  +++  L +
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHG------IEPNIAHYGCLVDLLARAGRLKE 527

Query: 332 A-ELLFNAIAPMNDLVSWNSMISG 354
           A E++ N     N +V W ++++G
Sbjct: 528 AYEVIENMPIKANSIV-WGALLAG 550



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 10/313 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T++++ ++N+   + +   F +   KD V+W AMI   + +      L  F  M    ++
Sbjct: 310 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ +++A   +  L+ G  +     +  +  D  + N  ++MY KCGD++ +E  
Sbjct: 370 PDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESI 429

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   D  +W  ++ G   N + EK L  F  M  +    D ++    ++A    G +
Sbjct: 430 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 489

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
             G+  + L +   +   P ++    L+ + ++ G ++ A      M  K + + W A++
Sbjct: 490 DKGRK-YFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 548

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI----SLCADSLLLREGRS-VHGYA 304
            G  +  + + A  ++ ++     +EPD   V  L+    + C     LRE R  +    
Sbjct: 549 AGCRVYRESDMAEMVVKQIL---ELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKG 605

Query: 305 IRRLLGYDLLMMN 317
           I++  G  L+ MN
Sbjct: 606 IKKXPGCSLIEMN 618


>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g56570
 gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
 gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 611

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 271/504 (53%), Gaps = 38/504 (7%)

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKE 358
           + +L  N ++ ++ K   + +A  LF+ + P  D+V+W +MI+G             F E
Sbjct: 44  HHILATNLIVSYFEKG-LVEEARSLFDEM-PDRDVVAWTAMITGYASSNYNARAWECFHE 101

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           M+   +  +  TL ++L SC + + L +G  +H   +KLG   +    NA+M+MY  C  
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT-QQQNASPDSVTLVNV 477
            + A  L+ R     +   W  +I   T  G     +K +K M  +    +P  +T+   
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA-- 219

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + A  +++    GK +H   +K     +  V N+++ +Y RC  +  A   F    + +L
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            TWN +IS   ++ +   AL +F+  E   F PN  +  S+++AC  +  L  G+Q+HG 
Sbjct: 280 ITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338

Query: 595 VFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWE 638
           +F  GF +N  +++AL+DMY+ C                ++  +W+SM+  YG HG G E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398

Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
           A+ELF +M +SGIRP +   +++LSAC H+GLV++GL+Y+N M  EY + P+ + + C+V
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458

Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC-SHHGDTKMGKQVAELLFKLEPENV 757
           D+LGR+GK+ EAYE ++ +P +P    WGA+L AC +H  +  + +  A  + +L+P+ V
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518

Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
           G Y+ LS +Y A G+W D   + K
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRK 542



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 218/459 (47%), Gaps = 18/459 (3%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           H   +T+L+ +Y      E + +LF E  ++DVV W AMIT    +         F EMV
Sbjct: 44  HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           ++G   +  TL  ++ +   M  L  G +VH + +K GM     + N  +NMYA C    
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163

Query: 126 SSEC-TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
            + C  F  +   + V+W T+++G  H       L  +++M     +     ++ AV AS
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A +  ++ GK IHA  IK G++ +  + V NS++ +Y +CG +  A+  F  M  KD+++
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSN--LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I     +    EA  +    +    V P+  T  +L++ CA+   L  G+ +HG  
Sbjct: 282 WNTLISELERSDS-SEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRI 339

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            RR    ++ + N+L+D Y+K  ++  ++ +F  I    +LVSW SM+ G          
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
             LF +M+    +      +A+L +C     +E G K  +  + + G + +    N ++ 
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           +    G +  A+ L++R+    D S W  ++ AC  + H
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 43/487 (8%)

Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           Y+   +  +  +LI  Y + G +E A   F  M  +DVV+W A+I G+A +     A++ 
Sbjct: 39  YKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98

Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
            HEM + +   P+  T+ +++  C +  +L  G  VHG  ++  +   L + N++M+ Y+
Sbjct: 99  FHEM-VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157

Query: 325 K-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
             S ++  A L+F  I   ND V+W ++I+G            ++K+ML   ++ +   +
Sbjct: 158 TCSVTMEAACLIFRDIKVKND-VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCI 216

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
              + +  S +S+  GK IH   +K GF +N   +N+++ +Y  CG L  A      +  
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM-E 275

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + D   WN +I    ++    EA+  F+   + Q   P+  T  ++++AC N+     G+
Sbjct: 276 DKDLITWNTLISELERSDS-SEALLMFQRF-ESQGFVPNCYTFTSLVAACANIAALNCGQ 333

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFSQN 550
            LHG   +     +  + NALI MY +C +I  +  VF E     NL +W  M+  +  +
Sbjct: 334 QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393

Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                A+ELF  +      P+ I  +++LSAC   G++  G +      +    E+ +  
Sbjct: 394 GYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK------YFNVMESEYGI 447

Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-- 665
           +   D+Y NC        ++   G  GK  EA EL   M     +P +S+  ++L AC  
Sbjct: 448 NPDRDIY-NC--------VVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKA 495

Query: 666 -SHSGLV 671
             H+GL+
Sbjct: 496 HKHNGLI 502



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 6/252 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF ++LP   S+L  Y    Y   +   F+E  +KD++TWN +I+  +E       L  
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLM 300

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F     +G   +  T   +V+A   +  L  G+ +H    + G   +  L N  ++MYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360

Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG++  S+  F  +    + VSW ++M G   + Y  + +  F +M  SG + D +   +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420

Query: 180 AVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            ++A    G +  G K  + +  + G   +P   + N ++ +  + G I  A      M 
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGI--NPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478

Query: 239 CK-DVVSWNAII 249
            K D  +W AI+
Sbjct: 479 FKPDESTWGAIL 490


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 180/627 (28%), Positives = 315/627 (50%), Gaps = 44/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           L  G ++HA  +   ++  P  +    N +IS + + G +  A   F GM  +  VSW  
Sbjct: 54  LERGDLVHAHQV---FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  + + +EAF L  +M+    +EPD  T+VTL+S   +         +H + I+ 
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMR-RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
              Y+L++ NSL+D Y K++ L  A  LF  +    D V++NS+++G            L
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIEL 228

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F E+     + S  T  A+L +    +  +FG+ +H + LK  F  N    NAL+  Y  
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVT 473
              +     L   +    D   +N+VI +   NG F+E+   F+ +  T+         T
Sbjct: 289 HDQVDEVGKLFYEMPE-LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFAT 347

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L+++ ++  NL +   G+ +H  A+      ++RV+NAL+ MY +C   K A  +F++  
Sbjct: 348 LLSIATSSLNLRM---GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
             +   W  MISA+ Q       + +F   R      ++ +  SIL AC  L  +  G+Q
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H  +   GF  N +  SALLD Y+ C               +++ +W+++ISAY  +G 
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
               +  F +M  SG +P   S +S+LSACSH G V+E L ++N+M + Y+V P+ EH+ 
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP- 754
            +VD+L R+G+  EA + +  +P +P   +W ++L++C  H + ++ K+ A+ LF +E  
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
            +   YI++SN+Y   G+W +  ++ K
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKK 671



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 166/602 (27%), Positives = 284/602 (47%), Gaps = 54/602 (8%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           N L++G +VH   +   M A +++  N+ ++ + K G L+ +   F GM     VSW  +
Sbjct: 52  NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI---HALGIK 202
           + G L +N  ++    + +M   G + D V+L + ++     GEL    VI   H   IK
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG---FGELETKNVIVQIHTHVIK 168

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LGYE +  + V NSL+  Y +   +  A + F  M  KD V++N+++ G++  G  EEA 
Sbjct: 169 LGYEYN--LMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +L  E+     ++P   T   L+S        + G+ VHG+ ++    +++ + N+L+D+
Sbjct: 227 ELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLC----------SQFS 367
           YSK + + +   LF  + P  D +S+N +I+     G FKE   L            QF 
Sbjct: 286 YSKHDQVDEVGKLFYEM-PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           F+TLL+I     S  +L  G+ IHC  + +G +  +   NAL+ MY  C     A  +  
Sbjct: 345 FATLLSI---ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            I+  S T  W  +I A  Q G  +E I  F  M ++     D  T  +++ AC NL   
Sbjct: 402 NIACKS-TVPWTAMISAYVQKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASI 459

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G+ LH L ++S    +    +AL+  Y +C  +  A   F      N  +WN +ISA+
Sbjct: 460 SLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAY 519

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +QN      L  F+ +    ++P+ +S +S+LSAC+                H GF E +
Sbjct: 520 AQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS----------------HCGFVEEA 563

Query: 605 FIS-SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
               +++  +Y        ++SM+     +G+  EA +L  EM      P++    S+L+
Sbjct: 564 LWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLN 620

Query: 664 AC 665
           +C
Sbjct: 621 SC 622



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 256/563 (45%), Gaps = 48/563 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF     +  V+W  +I   +++         + +M   GI  D  TL+ ++S   ++  
Sbjct: 96  LFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET 155

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
                 +H   IK G   +  +CN  V+ Y K   L  +   F  M   DTV++N++M+G
Sbjct: 156 KNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTG 215

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             +    E+ +  F E+  SG +  + + ++ ++A+  L +  +G+ +H   +K  +  +
Sbjct: 216 YSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWN 275

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   N+L+  YS+   ++   + F+ M   D +S+N +I  +A NG+F+E+FDL  ++
Sbjct: 276 VFVG--NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKL 333

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q  R  +       TL+S+   SL LR GR +H  AI     ++  + N+L+D Y+K N 
Sbjct: 334 QFTR-FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
             +A+ +F+ IA     V W +MIS             +F +M         +T  +IL 
Sbjct: 393 DKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  S+  G+ +H   ++ GF +N    +AL+  Y  CG +  A      +   +  S
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I A  QNG+    + +F+ M  Q    PDSV+ ++V+SAC +           G 
Sbjct: 512 -WNALISAYAQNGNVDGTLNSFQQMI-QSGYKPDSVSFLSVLSACSHC----------GF 559

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             ++L   ++  Q   +T                         +  M+    +N     A
Sbjct: 560 VEEALWHFNSMTQIYEVTPKRE--------------------HYTSMVDVLCRNGRFDEA 599

Query: 557 LELFRHLEFEPNEISIVSILSAC 579
            +L   + FEP+EI   S+L++C
Sbjct: 600 EKLMTEMPFEPSEIMWSSVLNSC 622



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 146/293 (49%), Gaps = 15/293 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+ ++    +LL  YS     +    LFYE    D +++N +IT+   N         F 
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFR 331

Query: 63  EMVEEGIRFD------STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
           ++  +  RFD      +T L I  S+L     L+ GR +HC +I  G   +S + N  V+
Sbjct: 332 KL--QFTRFDRRQFPFATLLSIATSSLN----LRMGRQIHCQAITVGANFESRVENALVD 385

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           MYAKC     ++  F  + C  TV W  ++S  +     E+ +  F +M  +G  AD  +
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            +S + A A L  +S G+ +H+L I+ G+  + Y    ++L+  Y++CG +  A ++F  
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSG--SALLDTYAKCGCMTDAIKSFGE 503

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           M  ++ VSWNA+I  +A NG  +   +   +M +    +PD  + ++++S C+
Sbjct: 504 MPERNSVSWNALISAYAQNGNVDGTLNSFQQM-IQSGYKPDSVSFLSVLSACS 555



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 217/503 (43%), Gaps = 58/503 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  +L    SL+ AY        +  LF    NKD VT+N+++T           +  F
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E+   GI+    T   ++SA   ++  K G+ VH   +K   + +  + N  ++ Y+K 
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++     F  M   D +S+N +++    N   ++    FR++ ++         ++ +
Sbjct: 290 DQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349

Query: 182 AASACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + +     L  G+ IH   I +G  +E      V N+L+ MY++C   + A++ F  + C
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFES----RVENALVDMYAKCNGDKEAQKIFDNIAC 405

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K  V W A+I  +   GK EE  ++  +M+    V  D AT  +++  CA+   +  GR 
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILRACANLASISLGRQ 464

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +H   IR     ++   ++L+D Y+K   ++ A   F  + P  + VSWN++IS      
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM-PERNSVSWNALISAYAQNG 523

Query: 356 --------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F++M+    +    + L++L +C+           HC     GF        
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS-----------HC-----GFVE-----E 562

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL H       +   + +  +  H +     ++V V C +NG F EA K    M  +   
Sbjct: 563 ALWHF----NSMTQIYEVTPKREHYT-----SMVDVLC-RNGRFDEAEKLMTEMPFE--- 609

Query: 468 SPDSVTLVNVISAC---GNLELA 487
            P  +   +V+++C    N ELA
Sbjct: 610 -PSEIMWSSVLNSCRIHKNHELA 631



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 180/431 (41%), Gaps = 60/431 (13%)

Query: 369 STLLAILPSCNSP---ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           +TL   L   NSP    SL     I    +K GF+ NT   N  ++ ++  GDLV A  +
Sbjct: 6   ATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQV 65

Query: 426 LQRISHNSDTS------------------------------CWNIVIVACTQNGHFQEAI 455
             ++   +  S                               W I+I    Q+   +EA 
Sbjct: 66  FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAF 125

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + +  M ++    PD VTLV ++S  G LE       +H   +K     +  V N+L+  
Sbjct: 126 RLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDA 184

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISI 572
           Y +   +  AS +F+   N +  T+N +++ +S       A+ELF  L     +P++ + 
Sbjct: 185 YCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTF 244

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK-------------- 618
            ++LSA   L   + G+Q+HG V    F  N F+ +ALLD YS                 
Sbjct: 245 AALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPE 304

Query: 619 -SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
               +++ +I++Y ++G+  E+ +LF ++  +     +    +LLS  + S  +  G Q 
Sbjct: 305 LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQI 364

Query: 678 YNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           +   +     ++ R E      +VDM  +    +EA +   N+  +     W AM+SA  
Sbjct: 365 HCQAITVGANFESRVEN----ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYV 419

Query: 735 HHGDTKMGKQV 745
             G  + G  V
Sbjct: 420 QKGKHEEGINV 430



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 19/276 (6%)

Query: 21  SYFESSLALFYETCNKD--------------VVTWNAMITACVENRCVVMGLHFFGEMVE 66
           S  E++L   Y  CN D               V W AMI+A V+      G++ F +M  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+  D  T   I+ A   +  +  GR +H L I++G +++    +  ++ YAKCG +  
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +  +F  M   ++VSWN ++S    N   +  L  F++M  SG + D+VS  S ++A + 
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV-VSW 245
            G +    + H   +   YE +P      S++ +  + G  + AE+    M  +   + W
Sbjct: 557 CGFVEEA-LWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMW 615

Query: 246 NAIIDGFALNGKFE---EAFDLLHEMQLMRSVEPDI 278
           +++++   ++   E   +A D L  M+ +R   P I
Sbjct: 616 SSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 180/627 (28%), Positives = 315/627 (50%), Gaps = 44/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           L  G ++HA  +   ++  P  +    N +IS + + G +  A   F GM  +  VSW  
Sbjct: 54  LERGDLVHAHQV---FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  + + +EAF L  +M+    +EPD  T+VTL+S   +         +H + I+ 
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMR-RGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
              Y+L++ NSL+D Y K++ L  A  LF  +    D V++NS+++G            L
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIEL 228

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F E+     + S  T  A+L +    +  +FG+ +H + LK  F  N    NAL+  Y  
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVT 473
              +     L   +    D   +N+VI +   NG F+E+   F+ +  T+         T
Sbjct: 289 HDQVDEVGKLFXEMPE-LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFAT 347

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           L+++ ++  NL +   G+ +H  A+      ++RV+NAL+ MY +C   K A  +F++  
Sbjct: 348 LLSIATSSLNLRM---GRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA 404

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
             +   W  MISA+ Q       + +F   R      ++ +  SIL AC  L  +  G+Q
Sbjct: 405 CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQ 464

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +H  +   GF  N +  SALLD Y+ C               +++ +W+++ISAY  +G 
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGN 524

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
               +  F +M  SG +P   S +S+LSACSH G V+E L ++N+M + Y+V P+ EH+ 
Sbjct: 525 VDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYT 584

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP- 754
            +VD+L R+G+  EA + +  +P +P   +W ++L++C  H + ++ K+ A+ LF +E  
Sbjct: 585 SMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDL 644

Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
            +   YI++SN+Y   G+W +  ++ K
Sbjct: 645 RDAAPYINMSNIYAVAGQWDNVAKVKK 671



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 166/602 (27%), Positives = 284/602 (47%), Gaps = 54/602 (8%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           N L++G +VH   +   M A +++  N+ ++ + K G L+ +   F GM     VSW  +
Sbjct: 52  NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI---HALGIK 202
           + G L +N  ++    + +M   G + D V+L + ++     GEL    VI   H   IK
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG---FGELETKNVIVQIHTHVIK 168

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LGYE +  + V NSL+  Y +   +  A + F  M  KD V++N+++ G++  G  EEA 
Sbjct: 169 LGYEYN--LMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
           +L  E+     ++P   T   L+S        + G+ VHG+ ++    +++ + N+L+D+
Sbjct: 227 ELFLELH-NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDY 285

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLC----------SQFS 367
           YSK + + +   LF  + P  D +S+N +I+     G FKE   L            QF 
Sbjct: 286 YSKHDQVDEVGKLFXEM-PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFP 344

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           F+TLL+I     S  +L  G+ IHC  + +G +  +   NAL+ MY  C     A  +  
Sbjct: 345 FATLLSI---ATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            I+  S T  W  +I A  Q G  +E I  F  M ++     D  T  +++ AC NL   
Sbjct: 402 NIACKS-TVPWTAMISAYVQKGKHEEGINVFSDM-RRTGVPADQATFASILRACANLASI 459

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G+ LH L ++S    +    +AL+  Y +C  +  A   F      N  +WN +ISA+
Sbjct: 460 SLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAY 519

Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
           +QN      L  F+ +    ++P+ +S +S+LSAC+                H GF E +
Sbjct: 520 AQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS----------------HCGFVEEA 563

Query: 605 FIS-SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
               +++  +Y        ++SM+     +G+  EA +L  EM      P++    S+L+
Sbjct: 564 LWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEM---PFEPSEIMWSSVLN 620

Query: 664 AC 665
           +C
Sbjct: 621 SC 622



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 255/563 (45%), Gaps = 48/563 (8%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
           LF     +  V+W  +I   +++         + +M   GI  D  TL+ ++S   ++  
Sbjct: 96  LFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELET 155

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
                 +H   IK G   +  +CN  V+ Y K   L  +   F  M   DTV++N++M+G
Sbjct: 156 KNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTG 215

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
             +    E+ +  F E+  SG +  + + ++ ++A+  L +  +G+ +H   +K  +  +
Sbjct: 216 YSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWN 275

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   N+L+  YS+   ++   + F  M   D +S+N +I  +A NG+F+E+FDL  ++
Sbjct: 276 VFVG--NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKL 333

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           Q  R  +       TL+S+   SL LR GR +H  AI     ++  + N+L+D Y+K N 
Sbjct: 334 QFTR-FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNG 392

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
             +A+ +F+ IA     V W +MIS             +F +M         +T  +IL 
Sbjct: 393 DKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C +  S+  G+ +H   ++ GF +N    +AL+  Y  CG +  A      +   +  S
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            WN +I A  QNG+    + +F+ M  Q    PDSV+ ++V+SAC +           G 
Sbjct: 512 -WNALISAYAQNGNVDGTLNSFQQMI-QSGYKPDSVSFLSVLSACSHC----------GF 559

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             ++L   ++  Q   +T                         +  M+    +N     A
Sbjct: 560 VEEALWHFNSMTQIYEVTPKRE--------------------HYTSMVDVLCRNGRFDEA 599

Query: 557 LELFRHLEFEPNEISIVSILSAC 579
            +L   + FEP+EI   S+L++C
Sbjct: 600 EKLMTEMPFEPSEIMWSSVLNSC 622



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 217/503 (43%), Gaps = 58/503 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  +L    SL+ AY        +  LF    NKD VT+N+++T           +  F
Sbjct: 170 GYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELF 229

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E+   GI+    T   ++SA   ++  K G+ VH   +K   + +  + N  ++ Y+K 
Sbjct: 230 LELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKH 289

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++     F  M   D +S+N +++    N   ++    FR++ ++         ++ +
Sbjct: 290 DQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349

Query: 182 AASACLGELSYGKVIHALGIKLG--YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + +     L  G+ IH   I +G  +E      V N+L+ MY++C   + A++ F  + C
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFES----RVENALVDMYAKCNGDKEAQKIFDNIAC 405

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           K  V W A+I  +   GK EE  ++  +M+    V  D AT  +++  CA+   +  GR 
Sbjct: 406 KSTVPWTAMISAYVQKGKHEEGINVFSDMRRT-GVPADQATFASILRACANLASISLGRQ 464

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +H   IR     ++   ++L+D Y+K   ++ A   F  + P  + VSWN++IS      
Sbjct: 465 LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEM-PERNSVSWNALISAYAQNG 523

Query: 356 --------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F++M+    +    + L++L +C+           HC     GF        
Sbjct: 524 NVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS-----------HC-----GFVE-----E 562

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL H       +   + +  +  H +     ++V V C +NG F EA K    M  +   
Sbjct: 563 ALWHF----NSMTQIYEVTPKREHYT-----SMVDVLC-RNGRFDEAEKLMTEMPFE--- 609

Query: 468 SPDSVTLVNVISAC---GNLELA 487
            P  +   +V+++C    N ELA
Sbjct: 610 -PSEIMWSSVLNSCRIHKNHELA 631



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 180/431 (41%), Gaps = 60/431 (13%)

Query: 369 STLLAILPSCNSP---ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           +TL   L   NSP    SL     I    +K GF+ NT   N  ++ ++  GDLV A  +
Sbjct: 6   ATLFQNLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQV 65

Query: 426 LQRISHNSDTS------------------------------CWNIVIVACTQNGHFQEAI 455
             ++   +  S                               W I+I    Q+   +EA 
Sbjct: 66  FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAF 125

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + +  M ++    PD VTLV ++S  G LE       +H   +K     +  V N+L+  
Sbjct: 126 RLYADM-RRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDA 184

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISI 572
           Y +   +  AS +F+   N +  T+N +++ +S       A+ELF  L     +P++ + 
Sbjct: 185 YCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTF 244

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK-------------- 618
            ++LSA   L   + G+Q+HG V    F  N F+ +ALLD YS                 
Sbjct: 245 AALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPE 304

Query: 619 -SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
               +++ +I++Y ++G+  E+ +LF ++  +     +    +LLS  + S  +  G Q 
Sbjct: 305 LDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQI 364

Query: 678 YNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           +   +     ++ R E      +VDM  +    +EA +   N+  +     W AM+SA  
Sbjct: 365 HCQAITVGANFESRVEN----ALVDMYAKCNGDKEAQKIFDNIACKSTVP-WTAMISAYV 419

Query: 735 HHGDTKMGKQV 745
             G  + G  V
Sbjct: 420 QKGKHEEGINV 430



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 127/276 (46%), Gaps = 19/276 (6%)

Query: 21  SYFESSLALFYETCNKD--------------VVTWNAMITACVENRCVVMGLHFFGEMVE 66
           S  E++L   Y  CN D               V W AMI+A V+      G++ F +M  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+  D  T   I+ A   +  +  GR +H L I++G +++    +  ++ YAKCG +  
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTD 496

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +  +F  M   ++VSWN ++S    N   +  L  F++M  SG + D+VS  S ++A + 
Sbjct: 497 AIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV-VSW 245
            G +    + H   +   YE +P      S++ +  + G  + AE+    M  +   + W
Sbjct: 557 CGFVEEA-LWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMW 615

Query: 246 NAIIDGFALNGKFE---EAFDLLHEMQLMRSVEPDI 278
           +++++   ++   E   +A D L  M+ +R   P I
Sbjct: 616 SSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYI 651


>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/540 (32%), Positives = 275/540 (50%), Gaps = 50/540 (9%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+ L  D   L+  +  H   +      +  +   L+  Y+       ++L+F+++   N
Sbjct: 32  LLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKN 91

Query: 344 DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
            +  WNS+I+G            LF++M   C      TL  I       + L  GK IH
Sbjct: 92  -VYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPDDYTLATISKVSGEIQDLVLGKLIH 149

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              L++GF ++ +  N++M MYI C +   A  +   +    +   +N++I  C   G+ 
Sbjct: 150 GKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQR-NVGSFNVIISGCAALGNL 208

Query: 452 QEAIKT-----FKSMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLH------GLALK 499
             ++       F+ M Q Q  + D+ T+ +++  C + +  F+ G+ LH      GL LK
Sbjct: 209 DYSLYADLWNFFRRM-QCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLK 267

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             M  D  + ++LI MY R   +  +  VF+   + N+  W  MI+ + QN A   AL L
Sbjct: 268 --MCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALIL 325

Query: 560 FRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           FR ++      PN +S+VS+L AC  L  L  GKQ+H     + F +   + +AL+DMY+
Sbjct: 326 FREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYA 385

Query: 616 NC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
            C                K    WSS+ISAYG HGKG EA+  ++EM   GI+P   +V+
Sbjct: 386 KCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVV 445

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +LSAC  SGLVDEG+  YN++  EY+++P  E   C+VD+LGRSG+L +A +FI+ +PI
Sbjct: 446 GVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPI 505

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            P P VWG++L+A   HG++         L +LEPEN   YISLSN Y +  RW +  E+
Sbjct: 506 IPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEV 565



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 232/488 (47%), Gaps = 32/488 (6%)

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG 169
           L    ++ YA  GD   S+  F  +H  +   WN++++G + N+  +  ++ FR+MG   
Sbjct: 63  LTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMG-RC 121

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
              D+ +L++    S  + +L  GK+IH   +++G+     + V NS++SMY +C +   
Sbjct: 122 LLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSD--IVVGNSVMSMYIRCREFGD 179

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFE-----EAFDLLHEMQLMRSVEPDIATVVTL 284
           A + F  M  ++V S+N II G A  G  +     + ++    MQ  +    D  TV +L
Sbjct: 180 AMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQC-QGYNADAFTVASL 238

Query: 285 ISLCADSL-LLREGRSVHGYAIRRLLGY----DLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           + +C DS      GR +H Y ++  L      D+ M +SL+D YS+SN L  +  +F+ +
Sbjct: 239 LPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQM 298

Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCS-QFSFSTLLAILPSCNSPESLEF 386
              N  V W +MI+G            LF+EM      + +  +L+++LP+C     L  
Sbjct: 299 KSRNIYV-WTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMG 357

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           GK +H + +K+ F++     NAL+ MY  CG L  A  +    S++ D   W+ +I A  
Sbjct: 358 GKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYG 417

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH-GLALKSLMGLD 505
            +G  QEA+ T+  M  QQ   PD +T+V V+SAC    L  EG S++  L  +  M   
Sbjct: 418 LHGKGQEALTTYYEML-QQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPS 476

Query: 506 TRVQNALITMYGRCRDIKSA-STVFESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHL 563
             +   ++ + GR   +  A   + E         W  +++A      +  R L     L
Sbjct: 477 VEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLL 536

Query: 564 EFEPNEIS 571
           E EP   S
Sbjct: 537 ELEPENPS 544



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 191/402 (47%), Gaps = 21/402 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L++AY+       S  +F     K+V  WN++I   V+N      +  F +M    +
Sbjct: 64  TTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCL 122

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  TL  I     ++  L  G+++H  S++ G ++D  + N  ++MY +C +   +  
Sbjct: 123 LPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMK 182

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLL-----YFREMGWSGEQADNVSLSSAVAAS 184
            F  M   +  S+N I+SGC      +  L      +FR M   G  AD  +++S +   
Sbjct: 183 VFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMC 242

Query: 185 A-CLGELSYGKVIHALGIKLGYEDS--PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
               G+  +G+ +H   +K G +      V + +SLI MYS+   +  + R F  M  ++
Sbjct: 243 CDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRN 302

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +  W A+I+G+  NG  E A  L  EMQ    + P+  ++V+++  C   + L  G+ VH
Sbjct: 303 IYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVH 362

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--GL---- 355
            ++I+      + + N+L+D Y+K  SL  A  +F+  +   D ++W+S+IS  GL    
Sbjct: 363 AFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKG 422

Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
                 + EML    +    T++ +L +C     ++ G SI+
Sbjct: 423 QEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIY 464


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 293/566 (51%), Gaps = 52/566 (9%)

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           +EA  +L E + ++S     A  V L+  C ++  L   R+VHG+  +     D+ +  S
Sbjct: 64  QEAMTMLTEGKAVQS-----AMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATS 118

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L++ Y + ++   A  LF+ + P  ++V+W ++++G            +F EML +    
Sbjct: 119 LVNAYMRCSAARDARRLFDGM-PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
           S  TL A L +C +   ++ GK +H + +K G  + T   N+L  +Y   G L +A    
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAF 237

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQE-AIKTFKSMTQQQNASPDSVTLVNVISACG-NL 484
            RI    +   W  +I AC ++    E  +  F  M       P+  TL +V+S CG  L
Sbjct: 238 WRIPEK-NVITWTTMISACAEDEECVELGMSLFIDMLMD-GVMPNEFTLTSVMSLCGTRL 295

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
           +L   GK +   + K     +  V+N+ + +Y R  +   A  +FE   + ++ TWN MI
Sbjct: 296 DLNL-GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMI 354

Query: 545 SAFSQ------NKAEVR-----ALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQ 590
           S ++Q      +  + R     AL +FR L+    +P+  +  SILS C+ +  L  G+Q
Sbjct: 355 SGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ 414

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           IH      GF  +  ++SAL++MY+ C               ++   W+SMIS Y  HG+
Sbjct: 415 IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ 474

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
             EAI+LF EM  +G+RP + + +SLLSACS++GLV+E   Y++ M +EY + P  +H+ 
Sbjct: 475 PQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C++DM  R G++++A+ FIK    +P   +W ++++ C  HG+ ++    A+ L +L+P+
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 594

Query: 756 NVGYYISLSNMYVALGRWKDAVEIGK 781
            +  YI L NMY++  RW+D   + K
Sbjct: 595 GIETYILLLNMYISTERWQDVARVRK 620



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 237/546 (43%), Gaps = 64/546 (11%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+ EG    S   + ++    +   L   R VH    K G  AD  +    VN Y +C  
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F GM   + V+W  +++G   N+ P   L  F EM   G    + +L + +  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL-- 186

Query: 184 SACLG--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +ACL   ++  GK +H   IK G E     S+ NSL S+Y++ G +++A RAFW +  K+
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAES--ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKN 244

Query: 242 VVSWNAIIDGFALNGK-FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           V++W  +I   A + +  E    L  +M LM  V P+  T+ +++SLC   L L  G+ V
Sbjct: 245 VITWTTMISACAEDEECVELGMSLFIDM-LMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 303

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
             ++ +     +L + NS M  Y +     +A  LF  +   + +++WN+MISG      
Sbjct: 304 QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDAS-IITWNAMISGYAQIMD 362

Query: 355 -----------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
                            +F+++     +    T  +IL  C++  +LE G+ IH   +K 
Sbjct: 363 SAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS 422

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF ++ +  +AL++MY  CG +  A      +   +  + W  +I   +Q+G  QEAI+ 
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVT-WTSMISGYSQHGQPQEAIQL 481

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F+ M +     P+ +T V+++SAC    L  E +    +  K                  
Sbjct: 482 FEEM-RLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK------------------ 522

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                       E C    +  + CMI  F +      A    +   FEPNE    S+++
Sbjct: 523 ------------EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVA 570

Query: 578 ACTQLG 583
            C   G
Sbjct: 571 GCRSHG 576



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 230/488 (47%), Gaps = 49/488 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  +TSL+ AY   S    +  LF     ++VVTW A++T    N    +GL  F
Sbjct: 108 GASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVF 167

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+E G      TL   ++A      +  G+ VH  +IK G  + +S+ N   ++YAK 
Sbjct: 168 VEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL 227

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC----LLYFREMGWSGEQADNVSL 177
           G L+S+   F  +   + ++W T++S C  +   E+C    +  F +M   G   +  +L
Sbjct: 228 GSLDSALRAFWRIPEKNVITWTTMISACAED---EECVELGMSLFIDMLMDGVMPNEFTL 284

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S ++      +L+ GK + A   K+G E +  + V NS + +Y + G+ + A R F  M
Sbjct: 285 TSVMSLCGTRLDLNLGKQVQAFSFKIGCETN--LPVKNSTMYLYLRKGETDEAMRLFEQM 342

Query: 238 TCKDVVSWNAIIDGFA-----------LNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLI 285
               +++WNA+I G+A              +  +A  +  +++  RSV +PD+ T  +++
Sbjct: 343 EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLK--RSVMKPDLFTFSSIL 400

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           S+C+  + L +G  +H   I+     D+++ ++L++ Y+K   +  A   F  + P    
Sbjct: 401 SVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM-PTRTF 459

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN-------SPESLEF 386
           V+W SMISG            LF+EM     + +  T +++L +C+       +    + 
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDM 519

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
            K  +C +  +           ++ M++  G +  AFS ++R     + + W+ ++  C 
Sbjct: 520 MKKEYCIEPVVDH------YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573

Query: 447 QNGHFQEA 454
            +G+ + A
Sbjct: 574 SHGNMELA 581


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 274/514 (53%), Gaps = 38/514 (7%)

Query: 300 VHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK- 357
           +H  A+R  LL  ++    SL+  Y +   +++A  +F+ + P  D+ +WN+M+SGL + 
Sbjct: 88  LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEM-PERDVPAWNAMLSGLCRN 146

Query: 358 ----EMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
               + + L  +           TL ++LP C           +H + +K G S      
Sbjct: 147 TRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVC 206

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           NAL+ +Y   G L  A  +   ++   D   WN +I A  Q G    A++ F  M  +  
Sbjct: 207 NALIDVYGKLGMLTEAHWVFGGMALR-DLVTWNSIISANEQGGKVAAAVELFHGM-MESG 264

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSA 525
             PD +TLV++ SA          KS+H    +    + D    NA++ MY +   I +A
Sbjct: 265 VCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAA 324

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR----HLEFEPNEISIVSILSACTQ 581
             VF++  + ++ +WN +I+ + QN     A+ ++     H   +P + + VS+L A + 
Sbjct: 325 QKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSY 384

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
           LG L+ G ++H      G   + ++++ L+D+Y+ C               +S   W+++
Sbjct: 385 LGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAI 444

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+  G HG G +A+ LF +M    I+P   + +SLL+ACSH+GLVD+G  +++ M   Y 
Sbjct: 445 IAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYG 504

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           + P  +H+ C+VDMLGR+G+L EA+EFI+++PI+P   VWGA+L AC  HG+ +MGK  +
Sbjct: 505 IVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVAS 564

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWK--DAVE 778
           + LF+L+PENVGYY+ +SNMY  +G+W   DAV 
Sbjct: 565 QNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVR 598



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 256/561 (45%), Gaps = 60/561 (10%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           +HA  ++LG    P V  + SL+  Y + G +  A R F  M  +DV +WNA++ G   N
Sbjct: 88  LHACALRLGLL-HPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRN 146

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC---ADSLLLREGRSVHGYAIRRLLGYD 312
            +  +A  LL  M +   V  D  T+ +++ +C    D  L      +H YA++  L  +
Sbjct: 147 TRAADAVTLLGRM-VGEGVAGDAVTLSSVLPMCVVLGDRAL---ALVMHVYAVKHGLSGE 202

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L + N+L+D Y K   L++A  +F  +A + DLV+WNS+IS             LF  M+
Sbjct: 203 LFVCNALIDVYGKLGMLTEAHWVFGGMA-LRDLVTWNSIISANEQGGKVAAAVELFHGMM 261

Query: 361 Y--LCSQ-FSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFS-NNTIGVNALMHMYIN 415
              +C    +  +L + +  C      E G KS+HC+  + G+   + I  NA++ MY  
Sbjct: 262 ESGVCPDVLTLVSLASAVAQCGD----ELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAK 317

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
              + AA  +   +  + D   WN +I    QNG   EAI+ +  M   +   P   T V
Sbjct: 318 MSKIDAAQKVFDNLP-DRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFV 376

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +V+ A   L    +G  +H L++K+ + LD  V   LI +Y +C  +  A  +FE     
Sbjct: 377 SVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRR 436

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
           +   WN +I+    +    +AL LF  +   E +P+ ++ VS+L+AC+  G++  G+   
Sbjct: 437 STGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSF- 495

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
              F L           +  +Y        ++ M+   G  G+  EA E    M    I+
Sbjct: 496 ---FDL-----------MQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP---IK 538

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGK---LQ 708
           P  +   +LL AC   G V+ G     N+ E   + PE   ++V + +M  + GK   + 
Sbjct: 539 PDSAVWGALLGACRIHGNVEMGKVASQNLFE---LDPENVGYYVLMSNMYAKIGKWDGVD 595

Query: 709 EAYEFIKNLPIQPKPGVWGAM 729
                ++   +Q  PG W +M
Sbjct: 596 AVRSLVRRQNLQKTPG-WSSM 615



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 209/457 (45%), Gaps = 15/457 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S SL+ AY        +  +F E   +DV  WNAM++    N      +   G MV EG
Sbjct: 104 ASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEG 163

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D+ TL  ++     +       V+H  ++K G+  +  +CN  +++Y K G L  + 
Sbjct: 164 VAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAH 223

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F GM   D V+WN+I+S           +  F  M  SG   D ++L S  +A A  G
Sbjct: 224 WVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG 283

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           +    K +H    + G++    ++  N+++ MY++   I+AA++ F  +  +DVVSWN +
Sbjct: 284 DELGAKSVHCYVRRRGWDVGDIIA-GNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTL 342

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG   EA  + ++M     ++P   T V+++   +    L++G  +H  +I+  
Sbjct: 343 ITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTG 402

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D+ +   L+D Y+K   L +A  LF  + P      WN++I+G            LF
Sbjct: 403 LNLDVYVTTCLIDLYAKCGKLVEAMFLFEHM-PRRSTGPWNAIIAGLGVHGHGAKALSLF 461

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
            +M     +    T +++L +C+    ++ G+S     Q   G          ++ M   
Sbjct: 462 SQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGR 521

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
            G L  AF  +Q +    D++ W  ++ AC  +G+ +
Sbjct: 522 AGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVE 558



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 5/300 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L    +L+  Y  +     +  +F     +D+VTWN++I+A  +   V   +  F
Sbjct: 198 GLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELF 257

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
             M+E G+  D  TL+ + SA+ Q       + VHC   + G  + D    N  V+MYAK
Sbjct: 258 HGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAK 317

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
              +++++  F  +   D VSWNT+++G + N    + +  + +M    G +    +  S
Sbjct: 318 MSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVS 377

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + LG L  G  +HAL IK G     Y  VT  LI +Y++CG +  A   F  M  
Sbjct: 378 VLPAYSYLGGLQQGMRMHALSIKTGLNLDVY--VTTCLIDLYAKCGKLVEAMFLFEHMPR 435

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +    WNAII G  ++G   +A  L  +MQ    ++PD  T V+L++ C+ + L+ +GRS
Sbjct: 436 RSTGPWNAIIAGLGVHGHGAKALSLFSQMQ-QEEIKPDHVTFVSLLAACSHAGLVDQGRS 494


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 183/620 (29%), Positives = 307/620 (49%), Gaps = 41/620 (6%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGF 252
           K++H   + LG      V +  SLI++Y  C D  +A   F     + DV  WN+++ G+
Sbjct: 24  KLVHQRILTLGLRRD--VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGY 81

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE--GRSVHGYAIRRLLG 310
           + N  F +  ++   +       PD  T   +I   A   L RE  GR +H   ++    
Sbjct: 82  SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGREFLGRMIHTLVVKSGYV 139

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQ 365
            D+++ +SL+  Y+K N    +  +F+ + P  D+ SWN++IS  ++     + L L  +
Sbjct: 140 CDVVVASSLVGMYAKFNLFENSLQVFDEM-PERDVASWNTVISCFYQSGEAEKALELFGR 198

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
              S       +L   + +C+    LE GK IH   +K GF  +    +AL+ MY  C  
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L  A  + Q++   S  + WN +I      G  +  ++    M  +    P   TL +++
Sbjct: 259 LEVAREVFQKMPRKSLVA-WNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSIL 316

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC        GK +HG  ++S++  D  V  +LI +Y +C +   A TVF         
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376

Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN MIS++       +A+E++  +     +P+ ++  S+L AC+QL  L  GKQIH  +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
                + +  + SALLDMYS C               K   +W+ MISAYG HG+  EA+
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
             F EM   G++P   +++++LSAC H+GL+DEGL++++ M  +Y + P  EH+ C++D+
Sbjct: 497 YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDI 556

Query: 701 LGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           LGR+G+L EAYE I+  P       +   + SAC  H +  +G ++A LL +  P++   
Sbjct: 557 LGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAST 616

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ L N+Y +   W  A  +
Sbjct: 617 YMVLFNLYASGESWDAARRV 636



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 252/510 (49%), Gaps = 24/510 (4%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF-DSTTLLIIVSALTQMNCLKQGRVV 95
           DV  WN++++   +N      L  F  ++   I   DS T   ++ A   +     GR++
Sbjct: 70  DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L +K+G + D  + +  V MYAK     +S   F  M   D  SWNT++S    +   
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           EK L  F  M  SG + ++VSL+ A++A + L  L  GK IH   +K G+E   YV+  +
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--S 247

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY +C  +E A   F  M  K +V+WN++I G+   G  +   ++L+ M ++    
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM-IIEGTR 306

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P   T+ +++  C+ S  L  G+ +HGY IR ++  D+ +  SL+D Y K    + AE +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366

Query: 336 FNAIAPMNDLV-SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           F+      D+  SWN MIS             ++ +M+ +  +    T  ++LP+C+   
Sbjct: 367 FS--KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +LE GK IH    +     + + ++AL+ MY  CG+   AF +   I    D   W ++I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
            A   +G  +EA+  F  M Q+    PD VTL+ V+SACG+  L  EG       ++S  
Sbjct: 484 SAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS-QMRSKY 541

Query: 503 GLDTRVQN--ALITMYGRCRDIKSASTVFE 530
           G++  +++   +I + GR   +  A  + +
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/593 (26%), Positives = 283/593 (47%), Gaps = 41/593 (6%)

Query: 72  DSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           +S+ LL ++   T     L++ ++VH   +  G+  D  LC   +N+Y  C D  S+   
Sbjct: 2   ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61

Query: 131 FSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLG 188
           F      +D   WN++MSG   N+     L  F R +  S    D+ +  + + A   LG
Sbjct: 62  FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               G++IH L +K GY     V V +SL+ MY++    E + + F  M  +DV SWN +
Sbjct: 122 REFLGRMIHTLVVKSGYVCD--VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  F  +G+ E+A +L   M+     EP+  ++   IS C+  L L  G+ +H   +++ 
Sbjct: 180 ISCFYQSGEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              D  + ++L+D Y K + L  A  +F  + P   LV+WNSMI G            + 
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKM-PRKSLVAWNSMIKGYVAKGDSKSCVEIL 297

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYIN 415
             M+   ++ S +TL +IL +C+   +L  GK IH + ++    N  I VN +L+ +Y  
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFK 356

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CG+   A ++  +   +   S WN++I +    G++ +A++ +  M       PD VT  
Sbjct: 357 CGEANLAETVFSKTQKDVAES-WNVMISSYISVGNWFKAVEVYDQMV-SVGVKPDVVTFT 414

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +V+ AC  L    +GK +H    +S +  D  + +AL+ MY +C + K A  +F S    
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
           ++ +W  MISA+  +     AL  F  ++    +P+ ++++++LSAC   G++  G +  
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             +       + +    +++ Y         S MI   G  G+  EA E+  +
Sbjct: 535 SQM------RSKYGIEPIIEHY---------SCMIDILGRAGRLLEAYEIIQQ 572



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 55/465 (11%)

Query: 369 STLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           S LL++L  C NS +SL   K +H   L LG   + +   +L+++Y  C D  +A  + +
Sbjct: 4   SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
                SD   WN ++   ++N  F + ++ FK +       PDS T  NVI A G L   
Sbjct: 64  NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           F G+ +H L +KS    D  V ++L+ MY +    +++  VF+     ++ +WN +IS F
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183

Query: 548 SQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
            Q+    +ALELF  +E   FEPN +S+   +SAC++L  L  GK+IH      GF+ + 
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243

Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +++SAL+DMY  C               KS  AW+SMI  Y   G     +E+ + M   
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG---- 705
           G RP+++++ S+L ACS S  +  G ++ +  +    V  +   +  ++D+  + G    
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362

Query: 706 ------------------------------KLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
                                         K  E Y+ + ++ ++P    + ++L ACS 
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
               + GKQ+   + +   E     +S L +MY   G  K+A  I
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 245/524 (46%), Gaps = 46/524 (8%)

Query: 279 ATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           + +++L+  C +S   LR  + VH   +   L  D+++  SL++ Y        A  +F 
Sbjct: 4   SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63

Query: 338 AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF----------- 386
                +D+  WNS++SG  K  ++  +   F  LL    S   P+S  F           
Sbjct: 64  NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNC--SICVPDSFTFPNVIKAYGALG 121

Query: 387 ----GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
               G+ IH   +K G+  + +  ++L+ MY        +  +   +    D + WN VI
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER-DVASWNTVI 180

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               Q+G  ++A++ F  M +     P+SV+L   ISAC  L     GK +H   +K   
Sbjct: 181 SCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            LD  V +AL+ MYG+C  ++ A  VF+     +L  WN MI  +         +E+   
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-K 618
           +  E   P++ ++ SIL AC++   L HGK IHG+V       + +++ +L+D+Y  C +
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359

Query: 619 SNAA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
           +N A              W+ MIS+Y   G  ++A+E++ +M + G++P   +  S+L A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           CS    +++G Q + ++ E    R ET+  +   ++DM  + G  +EA+    ++P +  
Sbjct: 420 CSQLAALEKGKQIHLSISES---RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKD 475

Query: 723 PGVWGAMLSACSHHGDTKMG-KQVAELL-FKLEPENVGYYISLS 764
              W  M+SA   HG  +    Q  E+  F L+P+ V     LS
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 219/449 (48%), Gaps = 19/449 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G++  +  ++SL+  Y+  + FE+SL +F E   +DV +WN +I+   ++      L  F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M   G   +S +L + +SA +++  L++G+ +H   +K G   D  + +  V+MY KC
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +   F  M     V+WN+++ G +     + C+     M   G +    +L+S +
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +    L +GK IH   I+       YV+   SLI +Y +CG+   AE  F   T KD
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNC--SLIDLYFKCGEANLAETVF-SKTQKD 373

Query: 242 VV-SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           V  SWN +I  +   G + +A ++  +M +   V+PD+ T  +++  C+    L +G+ +
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H       L  D L++++L+D YSK  +  +A  +FN+I P  D+VSW  MIS     G 
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI-PKKDVVSWTVMISAYGSHGQ 491

Query: 356 FKEMLYL---CSQFSFS----TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVN 407
            +E LY      +F       TLLA+L +C     ++ G K     + K G        +
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTS 436
            ++ +    G L+ A+ ++Q+    SD +
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPETSDNA 580



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 3/297 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF      +++L+  Y      E +  +F +   K +V WN+MI   V        +  
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
              M+ EG R   TTL  I+ A ++   L  G+ +H   I++ + AD  +    +++Y K
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG+ N +E  FS        SWN ++S  +      K +  + +M   G + D V+ +S 
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + L  L  GK IH L I     ++  + + ++L+ MYS+CG+ + A R F  +  K
Sbjct: 417 LPACSQLAALEKGKQIH-LSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKK 474

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           DVVSW  +I  +  +G+  EA     EMQ    ++PD  T++ ++S C  + L+ EG
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSACGHAGLIDEG 530


>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 281/543 (51%), Gaps = 35/543 (6%)

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           LM    P+  TV+++I   +   L    R + G  I+     ++ +  +L+ FYS  + +
Sbjct: 2   LMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYD-M 60

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
                +FN   P+ DLV W++M+S             +F+ M Y   + +  ++++ILP+
Sbjct: 61  GIVWKIFNQ-TPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPA 119

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C +  +L FGK IH + +K  F   T   N+L+ MY  C +  A+  +  +I    D   
Sbjct: 120 CANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEK-DLIS 178

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W  +I  C +N   +EA K F  M Q      D   + ++I A    +    G + HG  
Sbjct: 179 WTTIIRGCIENDCPREAFKAFSRM-QFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFL 237

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           LK+ +     +  AL+ MY +  +++SA  VF+     +  +W+ MIS  + ++    AL
Sbjct: 238 LKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNAL 297

Query: 558 ELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
           E F+ ++     PNEI+ VS+L AC+ +G    G+ I  H    G+  N+F+SSAL+D+Y
Sbjct: 298 ETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLY 357

Query: 615 SN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
                             K    WSSMI+ YG +G G EA+E F  M   G++P +   I
Sbjct: 358 CKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFI 417

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+LSACSH GL  EG   +++M ++Y + P+  H+ C+VD++ R G ++ A +F+  +P+
Sbjct: 418 SVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPM 477

Query: 720 QPKPGVWGAMLSAC-SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           +P   +WGA+L+ C S HG  ++ + VAE L  L+P+N  YY+ LSN+Y   GRW D   
Sbjct: 478 EPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVER 537

Query: 779 IGK 781
           + K
Sbjct: 538 LRK 540



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 210/462 (45%), Gaps = 28/462 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF + +  +T+L+  YS+         +F +T  KD+V W+AM++ACV++         F
Sbjct: 40  GFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIF 98

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  +  +++ I+ A   +  L  G+ +H  SIK      +++ N  V+MYAKC
Sbjct: 99  RAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKC 158

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +  +S   F  +   D +SW TI+ GC+ N+ P +    F  M +S   AD   +   +
Sbjct: 159 RNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLI 218

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A     E  +G   H   +K G     +VS+  +L+ MY++ G++E+A   F  +  KD
Sbjct: 219 VAIIQADEHKFGIAFHGFLLKNGL--LAFVSIGTALLQMYAKFGELESAIIVFDQLNKKD 276

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRS 299
            +SW+A+I   +++      ++ L   + M+S +  P+  T V+L+  C+       G S
Sbjct: 277 YISWSAMI---SVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGES 333

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
           +  +A +     +  + ++L+D Y K   +++   +FN I P  DLV W+SMI+G     
Sbjct: 334 IQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEI-PTKDLVCWSSMINGY---G 389

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSI----HC------W------QLKLGFSNNT 403
           L  C   +  T   +L     P  + F   +    HC      W      + K G     
Sbjct: 390 LNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKL 449

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
                ++ +    G++  A   + ++    D   W  ++  C
Sbjct: 450 PHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGC 491


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 193/630 (30%), Positives = 306/630 (48%), Gaps = 60/630 (9%)

Query: 197 HALGIKLGYE-DSPYVSVTNSLISMYSQCGD--IEAAERAFWGMTCKDVVSWNAIIDGFA 253
           HA  +K G+   +P+    N L++ YS+     + AA R F  +  +D VSWNA++   A
Sbjct: 14  HASLLKSGFAAPTPW----NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHA 69

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE---GRSVHGYAIRRLLG 310
            +G   EA+ LL  M      +   +    L S    + + R    G  +   A++  L 
Sbjct: 70  ASGAHPEAWRLLRAMH----AQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLA 125

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            ++   ++L+D Y+K   +  A  +F+ + P  + VSWN++I+G            LF E
Sbjct: 126 NNVFAASALLDVYAKCGRVRDARQVFDGM-PERNTVSWNALIAGYTESGDMASALELFLE 184

Query: 359 MLY---LCSQFSFSTLLAIL--PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           M     +  + +F++LL  +  PSC           +H   +K G +     +NA +  Y
Sbjct: 185 MEREGLVPDEATFASLLTAVEGPSCF------LMHQLHGKIVKYGSALGLTVLNAAITAY 238

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L  +  +   I    D   WN ++ A T NG   EA+K F  M Q+    PD  +
Sbjct: 239 SQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYS 298

Query: 474 LVNVISACG-NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD---IKSASTVF 529
             ++IS+C  +     +G+ +HGL +KS +   T V NALI MY R  +   ++ A   F
Sbjct: 299 FTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCF 358

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
            S    +  +WN M++ +SQ+     AL+ FR +       +E +  + L + ++L VL+
Sbjct: 359 NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            GKQIHG V H GF  N F+SS+L+ MYS                  S+  W++MI  Y 
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYA 478

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
            HG+      LF+EM          + + L+++CSH+GLVDEG +  N M  +Y V    
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRM 538

Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
           EH+ C VD+ GR+G+L +A + I ++P +P   VW  +L AC  HG+ ++   VA  LF 
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFV 598

Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            EP     Y+ LS+MY  LG W D   + +
Sbjct: 599 AEPRQHSTYVLLSSMYSGLGMWSDRATVQR 628



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 162/624 (25%), Positives = 282/624 (45%), Gaps = 76/624 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           GF A  P +  LLTAYS  S     ++  +F E   +D V+WNA++ A   +        
Sbjct: 21  GFAAPTPWN-QLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWR 79

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVN 116
               M  +G+   ++    + SAL      ++   G  +  L++K+G+  +    +  ++
Sbjct: 80  LLRAMHAQGL---ASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLD 136

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG---EQAD 173
           +YAKCG +  +   F GM   +TVSWN +++G   +      L  F EM   G   ++A 
Sbjct: 137 VYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEAT 196

Query: 174 NVSLSSAVAASAC-LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
             SL +AV   +C L    +GK++   G  LG      ++V N+ I+ YSQCG ++ + R
Sbjct: 197 FASLLTAVEGPSCFLMHQLHGKIV-KYGSALG------LTVLNAAITAYSQCGSLKDSRR 249

Query: 233 AFWGM-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD- 290
            F G+   +D++SWNA++  +  NG  +EA      M     V PD+ +  ++IS C++ 
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS---LSKAELLFNAIAPMNDLVS 347
                +GR +HG  I+  L     + N+L+  Y++ N    +  A   FN++  + D VS
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVS 368

Query: 348 WNSMISGLFKEMLY---------LCS------QFSFSTLLAILPSCNSPESLEFGKSIHC 392
           WNSM++G  +  L          +CS      +++FS   A L S +    L+ GK IH 
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFS---AALRSSSELAVLQLGKQIHG 425

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +  GF++N    ++L+ MY   G +  A    +    +S    WN +I    Q+G  +
Sbjct: 426 LVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP-WNAMIFGYAQHGQAE 484

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
                F  M Q++ A  D +T V +I++C +  L  EG               + + N +
Sbjct: 485 NVDILFNEMLQRK-APLDHITFVGLITSCSHAGLVDEG---------------SEILNTM 528

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISI 572
            T YG                   +  + C +  + +     +A +L   + FEP+ +  
Sbjct: 529 ETKYG---------------VPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573

Query: 573 VSILSACTQLGVLRHGKQIHGHVF 596
           +++L AC   G +     +  H+F
Sbjct: 574 MTLLGACRIHGNVELASDVASHLF 597


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 172/565 (30%), Positives = 277/565 (49%), Gaps = 58/565 (10%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V SWN II G   NG  E+A D+   M L    +P+I T+ +++  C     LR G+++H
Sbjct: 10  VNSWNGIISGCVQNGYLEDALDMFSRM-LWYPEDPNIITIASILPACTGLKALRLGKAIH 68

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
             A++  +  ++ +  S++D YSK  S   AE +F   A   +   WN MI+    E   
Sbjct: 69  AIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVF-VKAENKNTAMWNEMIAAYVNEG-- 125

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                     L +L S                  K G+  + I  N ++  +   G    
Sbjct: 126 -----KVEDALGLLRSMQ----------------KDGWKPDVITYNTILSGHARNGLKTQ 164

Query: 422 AFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA----------- 467
           AF LL  +       +   +N++I    Q+G   EA+K F+ M    +            
Sbjct: 165 AFELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSM 224

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+ +T+   + AC +L L  +GK +HG  L++    +  V +AL+ MY +C D+ SA+ 
Sbjct: 225 RPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANK 284

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           VF      N  +WN +++ +  NK    AL+LF  +     +P+ I+ + +  AC  +  
Sbjct: 285 VFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAA 344

Query: 585 LRHGKQIHGHVFHLGFQE-NSFISSALLDMYSNC---------------KSNAAWSSMIS 628
           +R G+ +HG+       E  + I+SAL+DMY+ C               K    W++MIS
Sbjct: 345 IRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMIS 404

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
           A+  HG    A  +F +M   GI P   + +SLLSAC+  GLV+EG +Y+N+M   Y V 
Sbjct: 405 AFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVA 464

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
              EH+ C+V +LG +G L EA +FI+ +P  P   +W  +L AC  H + ++G++ A+ 
Sbjct: 465 ATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKA 524

Query: 749 LFKLEPENVGYYISLSNMYVALGRW 773
           LF+LEP+N   Y+ LSN+YV+ G W
Sbjct: 525 LFELEPDNATNYMLLSNIYVSSGMW 549



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 160/529 (30%), Positives = 250/529 (47%), Gaps = 35/529 (6%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SWN I+SGC+ N Y E  L  F  M W  E  + ++++S + A   L  L  GK IHA+ 
Sbjct: 12  SWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHAIA 71

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           +K G   + YV    S+I MYS+CG  + AE+ F     K+   WN +I  +   GK E+
Sbjct: 72  LKHGIVGNVYVE--GSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVED 129

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A  LL  MQ     +PD+ T  T++S  A + L  +   +    ++  L  +++  N L+
Sbjct: 130 ALGLLRSMQ-KDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLI 188

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNS 380
             + +S    +A  +F  +   +D  + N        E+L L  + +  T+   LP+C  
Sbjct: 189 SGFQQSGLSYEALKVFRIMQSPSDGCNPN--------EVLNLSMRPNPITITGALPACAD 240

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
                 GK IH + L+ GF  N    +AL+ MY  C D+ +A  +  RI    +T  WN 
Sbjct: 241 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRID-GRNTVSWNA 299

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK- 499
           ++     N   +EA+K F  M   +   P S+T + +  ACG++     G+ LHG A K 
Sbjct: 300 LMAGYIYNKQPEEALKLFLEML-GEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKC 358

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
            L  L   + +ALI MY +C  I  A +VF+S    ++  WN MISAFS +     A  +
Sbjct: 359 QLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAV 418

Query: 560 FRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  +E     P+ I+ VS+LSAC + G++  G +      +    E S+  +A L+ Y  
Sbjct: 419 FVQMELLGILPDHITFVSLLSACARDGLVEEGWK------YFNSMEISYGVAATLEHY-- 470

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                  + M+   G  G   EA++   +M      P      +LL AC
Sbjct: 471 -------TCMVGILGGAGLLDEALDFIRQM---PYPPDACMWATLLQAC 509



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 141/615 (22%), Positives = 255/615 (41%), Gaps = 100/615 (16%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V +WN +I+ CV+N  +   L  F  M+      +  T+  I+ A T +  L+ G+ +H 
Sbjct: 10  VNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHA 69

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
           +++K G++ +  +    ++MY+KCG  + +E  F      +T  WN +++  ++    E 
Sbjct: 70  IALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVED 129

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            L   R M   G + D ++ ++ ++  A  G  +    + +  +++G +           
Sbjct: 130 ALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLK----------- 178

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ-------- 269
                                  +VVS+N +I GF  +G   EA  +   MQ        
Sbjct: 179 ----------------------PNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNP 216

Query: 270 ---LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
              L  S+ P+  T+   +  CAD  L  +G+ +HGY +R     ++ + ++L+D Y+K 
Sbjct: 217 NEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKC 276

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
           + +  A  +F  I   N  VSWN++++G            LF EML    Q S  T + +
Sbjct: 277 HDMDSANKVFFRIDGRN-TVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMIL 335

Query: 375 LPSCNSPESLEFGKSIHCWQLK--LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            P+C    ++ FG+ +H +  K  L    N I  +AL+ MY  CG ++ A S+       
Sbjct: 336 FPACGDIAAIRFGRGLHGYAAKCQLDELKNAIA-SALIDMYAKCGSILDAKSVFDS-EVE 393

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN +I A + +G  + A   F  M +     PD +T V+++SAC    L  EG  
Sbjct: 394 KDVPLWNAMISAFSVHGMARNAFAVFVQM-ELLGILPDHITFVSLLSACARDGLVEEG-- 450

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
                         +  N++   YG    ++                + CM+        
Sbjct: 451 -------------WKYFNSMEISYGVAATLEH---------------YTCMVGILGGAGL 482

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG--------FQENS 604
              AL+  R + + P+     ++L AC        G++    +F L            N 
Sbjct: 483 LDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNI 542

Query: 605 FISSALLDMYSNCKS 619
           ++SS + D   N +S
Sbjct: 543 YVSSGMWDFAKNLRS 557



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  S++L+  Y+     +S+  +F+    ++ V+WNA++   + N+     L  F
Sbjct: 258 GFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLF 317

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAK 120
            EM+ EG++  S T +I+  A   +  ++ GR +H  + K  +    +++ +  ++MYAK
Sbjct: 318 LEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAK 377

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG +  ++  F      D   WN ++S    +         F +M   G   D+++  S 
Sbjct: 378 CGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSL 437

Query: 181 VAASACLGELSYG-KVIHALGIKLG 204
           ++A A  G +  G K  +++ I  G
Sbjct: 438 LSACARDGLVEEGWKYFNSMEISYG 462


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 182/613 (29%), Positives = 298/613 (48%), Gaps = 32/613 (5%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ +HA  I+ G   S      N L++ Y++CG +  A   F  + CKDVVSWN++I G+
Sbjct: 35  GRAVHAQIIRTG--TSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGY 92

Query: 253 ALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           + NG    +  ++   + MR+ +  P+  T+  +    +       GR  H   ++    
Sbjct: 93  SQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSF 152

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNA--IAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
            D+ +  SL+  Y K+  L    +++    +    D++      S  F E     S   +
Sbjct: 153 GDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSDY 211

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
               A+L S  +   +  G+ IH   +K G        NAL+ MY  C  L  A  +   
Sbjct: 212 -VFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 270

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
            S + ++  W+ ++   +QNG   EAIK F  M       P   T+V V++AC ++    
Sbjct: 271 -SGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLV 328

Query: 489 EGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
           EGK LH   LK  +G +  +    AL+ MY +   +  A   F+     ++  W  +IS 
Sbjct: 329 EGKQLHSFLLK--LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 386

Query: 547 FSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           + QN     AL L+R ++     PN+ ++ S+L AC+ L  L  GKQ+HGH    GF   
Sbjct: 387 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 446

Query: 604 SFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
             I SAL  MY+ C               K   +W++MIS   ++G+G EA+ELF EM  
Sbjct: 447 VPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 506

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G  P   + ++++SACSH G V+ G  Y++ M +++ + P+ +H+ C+VD+L R+G+L+
Sbjct: 507 EGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLK 566

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYV 768
           E  EFI++  I     +W  +LSAC +HG+ ++G    E L  L       Y+ L+ +Y 
Sbjct: 567 ETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYT 626

Query: 769 ALGRWKDAVEIGK 781
           ALGR +D   + K
Sbjct: 627 ALGRMRDVERVWK 639



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 256/540 (47%), Gaps = 47/540 (8%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           ++TLL  ++  +Q   L  GR VH   I+ G    +   NV VN YAKCG L  +   F+
Sbjct: 16  TSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFN 75

Query: 133 GMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            + C D VSWN++++G   N   +     +  FREM       +  +L+    A + L  
Sbjct: 76  AIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 135

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG--DIEAAERAFWGMTCKDVVSWNA 247
            + G+  HAL +K+      YV    SL+ MY + G   +      FW    KDV     
Sbjct: 136 CTVGRQAHALVVKMSSFGDIYVD--TSLVGMYCKAGLKYLYMVYYGFWLCYKKDV----- 188

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
                 L  + + +   L E +  +  + D      L SL A ++ +  GR +HG  ++ 
Sbjct: 189 ------LRRQLKSSICFLEEKE--KESDSDYVFTAVLSSLAA-TVYVGLGRQIHGITVKN 239

Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
            LLG+ + + N+L+  YSK  SL++A  +F++    N  ++W++M++G            
Sbjct: 240 GLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNS-ITWSAMVTGYSQNGESLEAIK 297

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF  M     + S  T++ +L +C+    L  GK +H + LKLGF  +     AL+ MY 
Sbjct: 298 LFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYA 357

Query: 415 NCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
             G   D    F  LQ      D + W  +I    QN   +EA+  ++ M +     P+ 
Sbjct: 358 KAGCLADARKGFDCLQE----RDVALWTSLISGYVQNSDNEEALILYRRM-KTAGIIPND 412

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T+ +V+ AC +L     GK +HG  +K   GL+  + +AL TMY +C  ++  + VF  
Sbjct: 413 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRR 472

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
             N ++ +WN MIS  S N     ALELF  +     EP++++ V+I+SAC+  G +  G
Sbjct: 473 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERG 532



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 257/573 (44%), Gaps = 58/573 (10%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCN--------------KDVVTWNAMITACVENR 52
           + T TS  T ++NV      L  FY  C               KDVV+WN++IT   +N 
Sbjct: 43  IRTGTSTCTQHANV------LVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNG 96

Query: 53  CVVMG---LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS 109
            +      +  F EM  + I  ++ TL  I  A + +     GR  H L +K     D  
Sbjct: 97  GISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIY 156

Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK-CLLYFREMGWS 168
           +    V MY K G L      + G        W       L        C L  +E    
Sbjct: 157 VDTSLVGMYCKAG-LKYLYMVYYGF-------WLCYKKDVLRRQLKSSICFLEEKEKESD 208

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
            +      LSS +AA+  +G    G+ IH + +K G     +V+++N+L++MYS+C  + 
Sbjct: 209 SDYVFTAVLSS-LAATVYVG---LGRQIHGITVKNGL--LGFVALSNALVTMYSKCESLN 262

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            A + F     ++ ++W+A++ G++ NG+  EA  L   M     ++P   T+V +++ C
Sbjct: 263 EACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRM-FSAGIKPSEYTIVGVLNAC 321

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +D   L EG+ +H + ++      L    +L+D Y+K+  L+ A   F+ +    D+  W
Sbjct: 322 SDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE-RDVALW 380

Query: 349 NSMISGLFK-----EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLK 396
            S+ISG  +     E L L  +   +       T+ ++L +C+S  +LE GK +H   +K
Sbjct: 381 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 440

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
            GF       +AL  MY  CG L    +L+ R + N D   WN +I   + NG   EA++
Sbjct: 441 HGFGLEVPIGSALSTMYTKCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 499

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALIT 514
            F+ M   +   PD VT VN+ISAC +      G S   + +    GLD +V +   ++ 
Sbjct: 500 LFEEML-AEGTEPDDVTFVNIISACSHKGFVERGWSYFHM-MSDQFGLDPKVDHYACMVD 557

Query: 515 MYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           +  R   +K      ES   +  LC W  ++SA
Sbjct: 558 VLSRAGQLKETKEFIESASIDHGLCLWRILLSA 590



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 174/354 (49%), Gaps = 4/354 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +  S +L+T YS       +  +F  + +++ +TW+AM+T   +N   +  +  F
Sbjct: 240 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLF 299

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI+    T++ +++A + +  L +G+ +H   +K G           V+MYAK 
Sbjct: 300 SRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKA 359

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F  +   D   W +++SG + N+  E+ L+ +R M  +G   ++ +++S +
Sbjct: 360 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 419

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L  L  GK +H   IK G+     V + ++L +MY++CG +E     F     KD
Sbjct: 420 KACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKD 477

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-V 300
           VVSWNA+I G + NG+ +EA +L  EM L    EPD  T V +IS C+    +  G S  
Sbjct: 478 VVSWNAMISGLSHNGQGDEALELFEEM-LAEGTEPDDVTFVNIISACSHKGFVERGWSYF 536

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           H  + +  L   +     ++D  S++  L + +    + +  + L  W  ++S 
Sbjct: 537 HMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSA 590



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 197/421 (46%), Gaps = 18/421 (4%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++S+L     +  GR +H +++K G++   +L N  V MY+KC  LN +   F      +
Sbjct: 216 VLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN 275

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
           +++W+ +++G   N    + +  F  M  +G +    ++   + A + +  L  GK +H+
Sbjct: 276 SITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHS 335

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
             +KLG+E   ++  T +L+ MY++ G +  A + F  +  +DV  W ++I G+  N   
Sbjct: 336 FLLKLGFE--RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 393

Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
           EEA  L   M+    + P+  T+ +++  C+    L  G+ VHG+ I+   G ++ + ++
Sbjct: 394 EEALILYRRMK-TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 452

Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQF 366
           L   Y+K  SL    L+F    P  D+VSWN+MISG            LF+EML   ++ 
Sbjct: 453 LSTMYTKCGSLEDGNLVFRR-TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEP 511

Query: 367 SFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
              T + I+ +C+    +E G S  H    + G          ++ +    G L      
Sbjct: 512 DDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEF 571

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNASPDSVTLVNVISACGNL 484
           ++  S +     W I++ AC  +G+ +  +    K M+     S   V L  + +A G +
Sbjct: 572 IESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRM 631

Query: 485 E 485
            
Sbjct: 632 R 632


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 185/654 (28%), Positives = 321/654 (49%), Gaps = 73/654 (11%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            + +H   IK G+  + ++S  N+LI++Y + GD+ +A++ F  M+ +++V+W  +I G+
Sbjct: 118 ARELHLQSIKYGFVGNLFLS--NTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGYAIRRLLG 310
             NGK +EA     +M +     P+     + +  C +S     + G  +HG   +   G
Sbjct: 176 TQNGKPDEACARFRDM-VRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234

Query: 311 YDLLMMNSLMDFYSKS-NSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFK 357
            D+++ N L+  Y    +S + A  +F+ I   N  +SWNS+IS             LF 
Sbjct: 235 SDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS-ISWNSIISVYSRRGDAVSAYDLFS 293

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINC 416
            M      FSF    A        E    G+ +H   ++ G ++N + + N L++MY   
Sbjct: 294 SMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 353

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV---- 472
           G +  A S+ + +    D+  WN +I    QN   ++A + F  M +    S +SV    
Sbjct: 354 GAIADACSVFELMVEK-DSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGAL 412

Query: 473 ---------------------------TLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
                                      T +N++SA  +L L      +H L LK  +  D
Sbjct: 413 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 472

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKAEVRALELFRHLE 564
           T + NAL++ YG+C ++     +F       +  +WN MIS +  N+   +A++L   + 
Sbjct: 473 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 532

Query: 565 FEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
            +   +   +  +ILSAC  +  L  G ++H        + +  + SAL+DMYS C    
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 592

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      ++  +W+SMIS Y  HG G +A++LF  M   G  P   + + +LSACS
Sbjct: 593 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 652

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H G V+EG +++ +M E Y + P  EH  C+VD+LGR+GKL E  +FI ++P++P   +W
Sbjct: 653 HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIW 712

Query: 727 GAMLSAC--SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
             +L AC  ++  +T++G++ AE+L +LEP+N   Y+ L+NMY +  +W+D  +
Sbjct: 713 RTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAK 766



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 255/555 (45%), Gaps = 62/555 (11%)

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           C ++ R +H  SIK G + +  L N  +N+Y + GDL S++  F  M   + V+W  ++S
Sbjct: 114 CSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLIS 173

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKLGY 205
           G   N  P++    FR+M  +G   ++ +  SA+ A    G      G  IH L  K  Y
Sbjct: 174 GYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRY 233

Query: 206 EDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
                V V N LISMY  C D    A   F G+  ++ +SWN+II  ++  G    A+DL
Sbjct: 234 GSD--VVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDL 291

Query: 265 LHEMQ---LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM-NSLM 320
              MQ   L  S +P+ A   +  S+  +    R+GR VH + IR  L  + + + N L+
Sbjct: 292 FSSMQKEGLGFSFKPNDA--FSEFSVLEEG--RRKGREVHAHVIRTGLNDNKVAIGNGLV 347

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQF------ 366
           + Y+KS +++ A  +F  +    D VSWNS+ISGL +        EM  L  ++      
Sbjct: 348 NMYAKSGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWN 406

Query: 367 ------------------------------SFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
                                         S  T + IL + +S    E    IH   LK
Sbjct: 407 SVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 466

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
              S++T   NAL+  Y  CG++     +  R+S   D   WN +I     N    +A+ 
Sbjct: 467 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 526

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
               M  Q+    DS T   ++SAC ++     G  +H   +++ +  D  V +AL+ MY
Sbjct: 527 LVWFM-MQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMY 585

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIV 573
            +C  I  AS  FE     N+ +WN MIS ++++    +AL+LF  +  +   P+ ++ V
Sbjct: 586 SKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFV 645

Query: 574 SILSACTQLGVLRHG 588
            +LSAC+ +G +  G
Sbjct: 646 GVLSACSHVGFVEEG 660



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 164/629 (26%), Positives = 272/629 (43%), Gaps = 76/629 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+ +L  S +L+  Y  +    S+  LF E  N+++VTW  +I+   +N         F
Sbjct: 129 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 188

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ--MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +MV  G   +       + A  +   +  K G  +H L  K    +D  +CNV ++MY 
Sbjct: 189 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 248

Query: 120 KCGD-LNSSECTFSGMHCADTVSWNTIMS-----GCLHNNYPEKCLLYFREMGWSGEQAD 173
            C D  N +   F G+   +++SWN+I+S     G   + Y     +    +G+S +  D
Sbjct: 249 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND 308

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             S  S +           G+ +HA  I+ G  D+  V++ N L++MY++ G I  A   
Sbjct: 309 AFSEFSVLEEGR-----RKGREVHAHVIRTGLNDNK-VAIGNGLVNMYAKSGAIADACSV 362

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEA---FDLLHE----------------------- 267
           F  M  KD VSWN++I G   N   E+A   F L+ E                       
Sbjct: 363 FELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQA 422

Query: 268 ----MQLMRSV-EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
               +Q+MR        T + ++S  +   L      +H   ++  L  D  + N+L+  
Sbjct: 423 VKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSC 482

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKEMLYLC--------------SQFS 367
           Y K   +++ E +F  ++   D VSWNSMISG +  E+L+                  F+
Sbjct: 483 YGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFT 542

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           F+T   IL +C S  +LE G  +H   ++    ++ +  +AL+ MY  CG +  A    +
Sbjct: 543 FAT---ILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFE 599

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +   +  S WN +I    ++GH ++A+K F  M       PD VT V V+SAC ++   
Sbjct: 600 LMPLRNVYS-WNSMISGYARHGHGEKALKLFTRM-MLDGQPPDHVTFVGVLSACSHVGFV 657

Query: 488 FEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMI 544
            EG   H  ++  +  L  RV++   ++ + GR   +        S     N+  W  ++
Sbjct: 658 EEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 716

Query: 545 SAFSQNKAEVRALELFRH-----LEFEPN 568
            A    +A  R  EL R      LE EP 
Sbjct: 717 GACC--RANGRNTELGRRAAEMLLELEPQ 743



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 129/567 (22%), Positives = 242/567 (42%), Gaps = 100/567 (17%)

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T  +LI+    S    E R +H  +I+     +L + N+L++ Y +   L  A+ LF+ +
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160

Query: 340 APMNDLVSWNSMISGL------------FKEML---YLCSQFSFSTLLAILPSCNSPESL 384
           +  N LV+W  +ISG             F++M+   ++ + ++F + L      + P   
Sbjct: 161 SNRN-LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE-SGPSGC 218

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV-AAFSLLQRISHNSDTSCWNIVIV 443
           + G  IH    K  + ++ +  N L+ MY +C D    A S+   I   +  S WN +I 
Sbjct: 219 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS-WNSIIS 277

Query: 444 ACTQNGHFQEAIKTFKSMTQQQ---NASP-DSVTLVNVISACGNLELAFEGKSLHGLALK 499
             ++ G    A   F SM ++    +  P D+ +  +V+      E   +G+ +H   ++
Sbjct: 278 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIR 332

Query: 500 SLMGLDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           + +  D +V   N L+ MY +   I  A +VFE     +  +WN +IS   QN+    A 
Sbjct: 333 TGLN-DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 391

Query: 558 ELFRHL-EFEP----------------------------------NEISIVSILSACTQL 582
           E+F  + E++                                   + ++ ++ILSA + L
Sbjct: 392 EMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSL 451

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSM 626
            +     QIH  V      +++ I +ALL  Y  C                +   +W+SM
Sbjct: 452 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 511

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           IS Y ++    +A++L   M   G R    +  ++LSAC+    ++ G++     +    
Sbjct: 512 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-----VHACG 566

Query: 687 VRPETEHHVCI----VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +R   E  V +    VDM  + G++  A  F + +P++     W +M+S  + HG    G
Sbjct: 567 IRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGH---G 622

Query: 743 KQVAELLFKL-----EPENVGYYISLS 764
           ++  +L  ++      P++V +   LS
Sbjct: 623 EKALKLFTRMMLDGQPPDHVTFVGVLS 649



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 7/265 (2%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           E   A   ET  +D V+WN+MI+  + N  +   +     M+++G R DS T   I+SA 
Sbjct: 493 EKIFARMSET--RDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSAC 550

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
             +  L++G  VH   I+A + +D  + +  V+MY+KCG ++ +   F  M   +  SWN
Sbjct: 551 ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWN 610

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           +++SG   + + EK L  F  M   G+  D+V+    ++A + +G +  G   H   +  
Sbjct: 611 SMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG-FEHFKSMSE 669

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDG-FALNGKFEEA 261
            Y  SP V   + ++ +  + G ++        M  K +V+ W  ++      NG+  E 
Sbjct: 670 VYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTEL 729

Query: 262 FDLLHEMQLMRSVEPDIATVVTLIS 286
                EM L   +EP  A    L++
Sbjct: 730 GRRAAEMLL--ELEPQNAVNYVLLA 752


>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 598

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 177/571 (30%), Positives = 294/571 (51%), Gaps = 45/571 (7%)

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGY 303
           WN +I   A +G +     L H + L+ + +  D +T  +L   CA   L R G SVH +
Sbjct: 13  WNRLIQLAAASGSYSRC--LRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAH 70

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A+      D+ ++ SL+D Y+K   L  A  LF+ + P   L+SWN M++          
Sbjct: 71  ALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEM-PSPTLISWNCMVTAYSKSSCVTE 129

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPS-CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
              +F  M  +  + S +TL+ +L    +S  +   G  ++ + +K G   +   +N+++
Sbjct: 130 AVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNSVL 189

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            M +  G L  A  L   + H      W+ ++    Q G + +    F  M Q      D
Sbjct: 190 TMLVRAGQLYDACLLFDSM-HEKSVVTWSAMVSGFLQTGDYMKVFGLFNHM-QTAGYKFD 247

Query: 471 SVTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
           SV LVN+ISA    GNL +A   K +H L +KS    +  + ++L+ +Y +C D+++A  
Sbjct: 248 SVALVNLISAAVLLGNLLVA---KGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQE 304

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           VF++ +  N+  W  MIS +++     +AL++F  +   + EPNE ++ S+LSAC  LG 
Sbjct: 305 VFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGS 364

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMI 627
               K++  HV  +G Q++  +++ L+D Y  C                 +  A WS+MI
Sbjct: 365 ANQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMI 424

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
           + Y   G+G EA+ LF+EM N G++P       LL+AC++SGLVDEGLQ + ++  EY +
Sbjct: 425 NGYACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNYSGLVDEGLQCFRSLTVEYGI 484

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
            P  EH++C +D+L ++G L  A EF + +PIQ +  V   +L+A S H      + V+E
Sbjct: 485 EPSIEHYMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLAPILTAYSAHCADSSIELVSE 544

Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            L  LEP N  + + ++NM   LG+WK A +
Sbjct: 545 ELLNLEPHNSDHCVLMANMLNCLGKWKKATD 575



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 193/383 (50%), Gaps = 17/383 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSLL  Y+  +    +  LF E  +  +++WN M+TA  ++ CV   +  F  M   G+R
Sbjct: 84  TSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAVAMFNTMRGVGVR 143

Query: 71  FDSTTLLIIVSA-LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
               TL+ ++S  +  ++    G  ++  S+K+G+  D  + N  + M  + G L  +  
Sbjct: 144 PSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNSVLTMLVRAGQLYDACL 203

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  MH    V+W+ ++SG L      K    F  M  +G + D+V+L + ++A+  LG 
Sbjct: 204 LFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFDSVALVNLISAAVLLGN 263

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L   K +HAL IK G+E      + +SL+++Y++CGD+EAA+  F  +  K+VV W ++I
Sbjct: 264 LLVAKGVHALLIKSGFESEQ--DLMSSLVNLYAKCGDLEAAQEVFDAVHRKNVVLWTSMI 321

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+A  G  ++A  +   M L   VEP+ ATV +++S CA+     + + V  + +   L
Sbjct: 322 SGYAEGGHPDKALKMFDSM-LCTDVEPNEATVSSVLSACANLGSANQAKKVEDHVVAIGL 380

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------------LF 356
             DL +   L+D Y K  +++ A  +F+ +   N DL  W++MI+G            LF
Sbjct: 381 QKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGYACIGEGSEALVLF 440

Query: 357 KEMLYLCSQFSFSTLLAILPSCN 379
            EM     Q        +L +CN
Sbjct: 441 NEMQNQGVQPDAIVFTHLLTACN 463



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 151/298 (50%), Gaps = 5/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    LP   S+LT          +  LF     K VVTW+AM++  ++    +     F
Sbjct: 177 GLDTDLPVLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLF 236

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G +FDS  L+ ++SA   +  L   + VH L IK+G  ++  L +  VN+YAKC
Sbjct: 237 NHMQTAGYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKC 296

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GDL +++  F  +H  + V W +++SG     +P+K L  F  M  +  + +  ++SS +
Sbjct: 297 GDLEAAQEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVL 356

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-- 239
           +A A LG  +  K +    + +G +    + V   LI  Y +CG++  A   F G+T   
Sbjct: 357 SACANLGSANQAKKVEDHVVAIGLQKD--LRVATGLIDTYCKCGNVTLAREIFDGVTTTN 414

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +D+  W+A+I+G+A  G+  EA  L +EMQ  + V+PD      L++ C  S L+ EG
Sbjct: 415 RDLAIWSAMINGYACIGEGSEALVLFNEMQ-NQGVQPDAIVFTHLLTACNYSGLVDEG 471



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 207/467 (44%), Gaps = 25/467 (5%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN +I     +      L  +  ++  G+  D++T   +  +   +   + G  VH  ++
Sbjct: 13  WNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHAL 72

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
             G  +D  +    ++MYAKC  L  +   F  M     +SWN +++    ++   + + 
Sbjct: 73  LVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAVA 132

Query: 161 YFREMGWSGEQADNVSLSSAVAASA-CLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLI 218
            F  M   G +    +L   ++     L   + G  ++   +K G + D P   V NS++
Sbjct: 133 MFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLP---VLNSVL 189

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           +M  + G +  A   F  M  K VV+W+A++ GF   G + + F L + MQ     + D 
Sbjct: 190 TMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQ-TAGYKFDS 248

Query: 279 ATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
             +V LIS      +LL+ +G  VH   I+     +  +M+SL++ Y+K   L  A+ +F
Sbjct: 249 VALVNLISAAVLLGNLLVAKG--VHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVF 306

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
           +A+   N +V W SMISG            +F  ML    + + +T+ ++L +C +  S 
Sbjct: 307 DAVHRKN-VVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSA 365

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIV 443
              K +    + +G   +      L+  Y  CG++  A  +   + + N D + W+ +I 
Sbjct: 366 NQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMIN 425

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
                G   EA+  F  M Q Q   PD++   ++++AC    L  EG
Sbjct: 426 GYACIGEGSEALVLFNEM-QNQGVQPDAIVFTHLLTACNYSGLVDEG 471


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 309/619 (49%), Gaps = 64/619 (10%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
           GELS  + +        +E  P+ +   TN +IS Y + G++  A + F GM  +  V+W
Sbjct: 61  GELSQARQL--------FEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTW 112

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
             +I G++   +F+EAF+L  +MQ     EPD  T VTL+S C    +  +   V    I
Sbjct: 113 TILIGGYSQLNQFKEAFELFVQMQRC-GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQII 171

Query: 306 RRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
           +  LGYD  L++ N+L+D Y KSN L  A                      LFKEM  + 
Sbjct: 172 K--LGYDSRLIVGNTLVDSYCKSNRLDLA--------------------CQLFKEMPEID 209

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           S F+F+   A+L +    + +  G+ IH + +K  F  N    NAL+  Y     ++ A 
Sbjct: 210 S-FTFA---AVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDAR 265

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDSVTLVNVISAC 481
            L   +    D   +N++I     +G  + A   F+ +  T          T++++ S  
Sbjct: 266 KLFDEMPEQ-DGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 324

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
            + E+   G+ +H   + +    +  V N+L+ MY +C   + A  +F +  + +   W 
Sbjct: 325 LDWEM---GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWT 381

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            MISA+ Q       L+LF   R      ++ +  S+L A   +  L  GKQ+H  +   
Sbjct: 382 AMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS 441

Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
           GF  N F  SALLD+Y+ C               ++  +W++MISAY  +G+    ++ F
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
            EM  SG++P   S + +LSACSHSGLV+EGL ++N+M + Y + P  EH+  +VDML R
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCR 561

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP-ENVGYYIS 762
           SG+  EA + +  +PI P   +W ++L+AC  H + ++ ++ A+ LF +E   +   Y++
Sbjct: 562 SGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVN 621

Query: 763 LSNMYVALGRWKDAVEIGK 781
           +SN+Y A G+W++  ++ K
Sbjct: 622 MSNIYAAAGQWENVSKVHK 640



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 153/631 (24%), Positives = 273/631 (43%), Gaps = 96/631 (15%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           N LK G +     +   M   +++  N+ ++ Y K G+L  +   F GM     V+W  +
Sbjct: 56  NFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTIL 115

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV--IHALGIKL 203
           + G    N  ++    F +M   G + D V+  + +  S C G     ++  +    IKL
Sbjct: 116 IGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL--SGCNGHEMGNQITQVQTQIIKL 173

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           GY+                                   ++  N ++D +  + + + A  
Sbjct: 174 GYDSR---------------------------------LIVGNTLVDSYCKSNRLDLACQ 200

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCA----DSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           L  EM       P+I +      LCA    D ++L  G+ +H + I+    +++ + N+L
Sbjct: 201 LFKEM-------PEIDSFTFAAVLCANIGLDDIVL--GQQIHSFVIKTNFVWNVFVSNAL 251

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC---S 364
           +DFYSK +S+  A  LF+ + P  D VS+N +ISG            LF+E+ +      
Sbjct: 252 LDFYSKHDSVIDARKLFDEM-PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRK 310

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           QF F+T+L+I    ++    E G+ IH   +     +  +  N+L+ MY  CG    A  
Sbjct: 311 QFPFATMLSI---ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 367

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   ++H S    W  +I A  Q G ++E ++ F  M +Q +   D  T  +++ A  ++
Sbjct: 368 IFTNLTHRSAVP-WTAMISAYVQKGFYEEGLQLFNKM-RQASVIADQATFASLLRASASI 425

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
                GK LH   +KS    +    +AL+ +Y +C  IK A   F+   + N+ +WN MI
Sbjct: 426 ASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMI 485

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           SA++QN      L+ F+ +     +P+ +S + +LSAC+  G++  G      ++H    
Sbjct: 486 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG------LWHF--- 536

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
                 +++  +Y        ++S++      G+  EA +L  EM    I P +    S+
Sbjct: 537 ------NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEM---PIDPDEIMWSSV 587

Query: 662 LSAC---SHSGLVDEGLQYYNNMLEEYDVRP 689
           L+AC    +  L         NM E  D  P
Sbjct: 588 LNACRIHKNQELARRAADQLFNMEELRDAAP 618



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/532 (23%), Positives = 226/532 (42%), Gaps = 64/532 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYET----CNKDVVTWNAMITAC---------------- 48
           T T L+  YS ++ F+ +  LF +        D VT+  +++ C                
Sbjct: 111 TWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQI 170

Query: 49  ---------------VENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
                          V++ C    L    ++ +E    DS T   ++ A   ++ +  G+
Sbjct: 171 IKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQ 230

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H   IK   + +  + N  ++ Y+K   +  +   F  M   D VS+N I+SG   + 
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 290

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
             +     FRE+ ++         ++ ++ ++   +   G+ IHA  I +   DS  + V
Sbjct: 291 KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI-VTTADSE-ILV 348

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            NSL+ MY++CG  E AE  F  +T +  V W A+I  +   G +EE   L ++M+   S
Sbjct: 349 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR-QAS 407

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V  D AT  +L+   A    L  G+ +H + I+     ++   ++L+D Y+K  S+  A 
Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
             F  + P  ++VSWN+MIS              FKEM+    Q    + L +L +C+  
Sbjct: 468 QTFQEM-PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526

Query: 382 ESLE-----FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
             +E     F      ++L     +      +++ M    G    A  L+  +  + D  
Sbjct: 527 GLVEEGLWHFNSMTQIYKLDPRREHYA----SVVDMLCRSGRFNEAEKLMAEMPIDPDEI 582

Query: 437 CWNIVIVACT--QNGHF-QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
            W+ V+ AC   +N    + A     +M + ++A+P  V + N+ +A G  E
Sbjct: 583 MWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP-YVNMSNIYAAAGQWE 633



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 177/359 (49%), Gaps = 16/359 (4%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F+ ++  S +LL  YS       +  LF E   +D V++N +I+    +         F 
Sbjct: 241 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 300

Query: 63  EM---VEEGIRFDSTTLLIIVSALTQMNCL--KQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           E+     +  +F   T+L I S     N L  + GR +H  +I     ++  + N  V+M
Sbjct: 301 ELQFTAFDRKQFPFATMLSIAS-----NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDM 355

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YAKCG    +E  F+ +     V W  ++S  +   + E+ L  F +M  +   AD  + 
Sbjct: 356 YAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATF 415

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S + ASA +  LS GK +H+  IK G+  + +    ++L+ +Y++CG I+ A + F  M
Sbjct: 416 ASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG--SALLDVYAKCGSIKDAVQTFQEM 473

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             +++VSWNA+I  +A NG+ E       EM ++  ++PD  + + ++S C+ S L+ EG
Sbjct: 474 PDRNIVSWNAMISAYAQNGEAEATLKSFKEM-VLSGLQPDSVSFLGVLSACSHSGLVEEG 532

Query: 298 RSVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              H  ++ ++   D    +  S++D   +S   ++AE L   +    D + W+S+++ 
Sbjct: 533 L-WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNA 590



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 5/156 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF++++ + ++LL  Y+     + ++  F E  ++++V+WNAMI+A  +N      L  F
Sbjct: 442 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 501

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV--FVNMYA 119
            EMV  G++ DS + L ++SA +    +++G + H  S+      D    +    V+M  
Sbjct: 502 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYASVVDMLC 560

Query: 120 KCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
           + G  N +E   + M    D + W+++++ C +H N
Sbjct: 561 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 596


>gi|302802387|ref|XP_002982948.1| hypothetical protein SELMODRAFT_155469 [Selaginella moellendorffii]
 gi|300149538|gb|EFJ16193.1| hypothetical protein SELMODRAFT_155469 [Selaginella moellendorffii]
          Length = 637

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 167/633 (26%), Positives = 318/633 (50%), Gaps = 42/633 (6%)

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           GE+ + ++  + + A    G+L  G+++H   +  G+ D    ++ N+++ MY + G I 
Sbjct: 5   GERPNAITFLNLIVACGSSGDLKRGRILHNRIVSCGF-DHHLANLGNAIVHMYGRSGSIA 63

Query: 229 AAERAFWGMTC--KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            A RAF  +    K V S+N+++  + L G   EA DL  +M       P+  +  T I 
Sbjct: 64  EARRAFLAIPSRLKSVASFNSMLRAYVLAGLQREAIDLFDQMP--SDPAPNAVSFTTAIG 121

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            C+    + +G ++H       L  D+ +  +L++ Y K      A  +F ++     +V
Sbjct: 122 ACSALGWIEKGTAIHARLAGTGLETDMGLATALVNMYGKRGLFDLATKVFESMTA-KTVV 180

Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           +W+++I+             L++ M+   S+ +  T L++L +C++   LE G+ IH   
Sbjct: 181 TWSALIAAYAQHGHAEEAFDLYRRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEI 240

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           + LG   + + +N ++ MYI C  L  A      ++ + D   W  +I A  Q G  + A
Sbjct: 241 VNLGLDRSLVLMNTVLTMYIKCRSLDEAGEFFAAMA-SRDLKSWMFIIAANAQQGRPERA 299

Query: 455 IKTFKSMTQQQNAS--PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           +  F+S+ ++++ +  PD V   +V++AC   + + +G+++H +    L      +  AL
Sbjct: 300 LALFRSLLEEKDPTLQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEATAV-IGTAL 358

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PN 568
           +  Y  C D+ +A + F    + ++  WN +I A  Q++    ALE+F  +  E    PN
Sbjct: 359 VDFYSNCGDLANAKSAFARIVDKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPN 418

Query: 569 EISIVSILSACTQLGVL-RHGKQIHGHVFHLGFQENSFISSALLDMYSN----------- 616
             + V++L ACT+   L   G++++  +   G++    + + +++M++            
Sbjct: 419 HRTFVALLEACTESPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVF 478

Query: 617 ----CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                K   +W+++I+A+   G    A EL+  M   G+ P + + IS+LS+C+H+G+VD
Sbjct: 479 ARMPIKDLVSWTAIIAAHTRSGARVGARELYWMMALQGLEPDEVTYISILSSCAHAGMVD 538

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           E   Y+ +M E++ V P  EH+VC++D+LGR+G+L++A E +           W ++L A
Sbjct: 539 EAWSYFVSMTEDFGVEPREEHYVCVIDLLGRAGRLRDAEELVMKTSKLLGAVGWTSVLGA 598

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           C  HGD     QV +   KLEP N G Y+ L++
Sbjct: 599 CRTHGDLHRANQVVDEAVKLEPGNSGAYLLLAH 631



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 262/540 (48%), Gaps = 29/540 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIAD-SSLCNVFVNMYAKCGDLNS 126
           G R ++ T L ++ A      LK+GR++H   +  G     ++L N  V+MY + G +  
Sbjct: 5   GERPNAITFLNLIVACGSSGDLKRGRILHNRIVSCGFDHHLANLGNAIVHMYGRSGSIAE 64

Query: 127 SECTFSGM--HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
           +   F  +        S+N+++   +      + +  F +M  S    + VS ++A+ A 
Sbjct: 65  ARRAFLAIPSRLKSVASFNSMLRAYVLAGLQREAIDLFDQMP-SDPAPNAVSFTTAIGAC 123

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           + LG +  G  IHA     G E    + +  +L++MY + G  + A + F  MT K VV+
Sbjct: 124 SALGWIEKGTAIHARLAGTGLETD--MGLATALVNMYGKRGLFDLATKVFESMTAKTVVT 181

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+A+I  +A +G  EEAFDL   M +    +P+  T ++++S C+    L  GR +H   
Sbjct: 182 WSALIAAYAQHGHAEEAFDLYRRM-MREGSKPNEVTFLSVLSACSTMRWLERGREIHSEI 240

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
           +   L   L++MN+++  Y K  SL +A   F A+A   DL SW  +I+           
Sbjct: 241 VNLGLDRSLVLMNTVLTMYIKCRSLDEAGEFFAAMAS-RDLKSWMFIIAANAQQGRPERA 299

Query: 354 -GLFKEMLYLCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
             LF+ +L       Q       ++L +C++ +  + G++IH        +   IG  AL
Sbjct: 300 LALFRSLLEEKDPTLQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEATAVIG-TAL 358

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y NCGDL  A S   RI  + D + WN +I AC Q+  ++EA++ F  M  +  + P
Sbjct: 359 VDFYSNCGDLANAKSAFARIV-DKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLP 417

Query: 470 DSVTLVNVISACG-NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           +  T V ++ AC  +  L   G+ L+   + S   L   +   +I M+ +   +  A  V
Sbjct: 418 NHRTFVALLEACTESPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDV 477

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVL 585
           F      +L +W  +I+A +++ A V A EL+  +     EP+E++ +SILS+C   G++
Sbjct: 478 FARMPIKDLVSWTAIIAAHTRSGARVGARELYWMMALQGLEPDEVTYISILSSCAHAGMV 537



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 204/476 (42%), Gaps = 33/476 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +  +T+L+  Y     F+ +  +F     K VVTW+A+I A  ++         +
Sbjct: 143 GLETDMGLATALVNMYGKRGLFDLATKVFESMTAKTVVTWSALIAAYAQHGHAEEAFDLY 202

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG + +  T L ++SA + M  L++GR +H   +  G+     L N  + MY KC
Sbjct: 203 RRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEIVNLGLDRSLVLMNTVLTMYIKC 262

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE---QADNVSLS 178
             L+ +   F+ M   D  SW  I++       PE+ L  FR +    +   Q D V  +
Sbjct: 263 RSLDEAGEFFAAMASRDLKSWMFIIAANAQQGRPERALALFRSLLEEKDPTLQPDEVIFA 322

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A +       G+ IH + I    E +  +    +L+  YS CGD+  A+ AF  + 
Sbjct: 323 SVLNACSTKKWSDDGRAIHRI-IPPRLEATAVIG--TALVDFYSNCGDLANAKSAFARIV 379

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL-REG 297
            KDV +WNAII     +  +EEA ++ + M +     P+  T V L+  C +S  L   G
Sbjct: 380 DKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTESPSLGAAG 439

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           R ++   +       L++   +++ ++K  SL +A  +F A  P+ DLVSW ++I+    
Sbjct: 440 RKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVF-ARMPIKDLVSWTAIIAAHTR 498

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    L+  M     +    T ++IL SC        G     W   +  + +  G
Sbjct: 499 SGARVGARELYWMMALQGLEPDEVTYISILSSCAHA-----GMVDEAWSYFVSMTED-FG 552

Query: 406 VNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           V      Y+         G L  A  L+ + S       W  V+ AC  +G    A
Sbjct: 553 VEPREEHYVCVIDLLGRAGRLRDAEELVMKTSKLLGAVGWTSVLGACRTHGDLHRA 608



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 116/507 (22%), Positives = 229/507 (45%), Gaps = 29/507 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           K V ++N+M+ A V        +  F +M  +    ++ +    + A + +  +++G  +
Sbjct: 77  KSVASFNSMLRAYVLAGLQREAIDLFDQMPSDPAP-NAVSFTTAIGACSALGWIEKGTAI 135

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H      G+  D  L    VNMY K G  + +   F  M     V+W+ +++    + + 
Sbjct: 136 HARLAGTGLETDMGLATALVNMYGKRGLFDLATKVFESMTAKTVVTWSALIAAYAQHGHA 195

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E+    +R M   G + + V+  S ++A + +  L  G+ IH+  + LG + S  + + N
Sbjct: 196 EEAFDLYRRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEIVNLGLDRS--LVLMN 253

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM--QLMRS 273
           ++++MY +C  ++ A   F  M  +D+ SW  II   A  G+ E A  L   +  +   +
Sbjct: 254 TVLTMYIKCRSLDEAGEFFAAMASRDLKSWMFIIAANAQQGRPERALALFRSLLEEKDPT 313

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           ++PD     ++++ C+      +GR++H     RL     ++  +L+DFYS    L+ A+
Sbjct: 314 LQPDEVIFASVLNACSTKKWSDDGRAIHRIIPPRLEA-TAVIGTALVDFYSNCGDLANAK 372

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------CSQFSFSTLLAILPSCNS 380
             F  I    D+ +WN++I    +  LY              CS  +  T +A+L +C  
Sbjct: 373 SAFARIVD-KDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTE 431

Query: 381 PESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
             SL   G+ ++   +  G+    +    +++M+   G L  A  +  R+    D   W 
Sbjct: 432 SPSLGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVFARMPIK-DLVSWT 490

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            +I A T++G  +   +    M   Q   PD VT ++++S+C +  +  E  S + +++ 
Sbjct: 491 AIIAAHTRSGA-RVGARELYWMMALQGLEPDEVTYISILSSCAHAGMVDEAWS-YFVSMT 548

Query: 500 SLMGLDTRVQN-----ALITMYGRCRD 521
              G++ R ++      L+   GR RD
Sbjct: 549 EDFGVEPREEHYVCVIDLLGRAGRLRD 575


>gi|222632692|gb|EEE64824.1| hypothetical protein OsJ_19680 [Oryza sativa Japonica Group]
          Length = 688

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 176/619 (28%), Positives = 296/619 (47%), Gaps = 73/619 (11%)

Query: 207 DSPYVSVTNSL--ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
           D P +S+ + L  +   ++   +  A R F GM  +D V++  ++ G A  G F  A  L
Sbjct: 19  DPPPLSMLDHLARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMAL 78

Query: 265 LHEMQLMRSVEPDIAT----VVTLI----SLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
              +   R+  P +A     V++L+    +  AD+  L    S+H +A    LG  L + 
Sbjct: 79  FSRL---RASSPPLAPADPFVLSLVFKSCAAAADARFLPHAASLHAFAAG-CLGLALKVF 134

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILP 376
           + +                     P  ++VSW ++++ L +      +   FS + A   
Sbjct: 135 DEM---------------------PHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGV 173

Query: 377 SCNSPES------------LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
            C+S               L  G+ +H +  KLG  +     N L  +Y  C D+  A +
Sbjct: 174 HCDSYAYAAALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALA 233

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---ASPDSVTLVNVISAC 481
            + R+    D + W  VI A  Q G  +EAI+ F  M ++++   ASP+  T   VI+AC
Sbjct: 234 AVSRMG-TRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAAC 292

Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD-IKSASTVFESCYNCNLCTW 540
            ++     G+ LH  A +        V N+L+T+Y R    + +A  VF      ++ +W
Sbjct: 293 ADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSW 352

Query: 541 NCMISAFSQNKAEVRALELFRHLEF-----EPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           + +IS ++Q      A  LFR +        PNE ++ S+LS C     L  G+Q+H   
Sbjct: 353 SAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLA 412

Query: 596 FHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEAI 640
              G + ++ I SAL+DMY    S                 +W++MI  Y  HG   +A+
Sbjct: 413 VAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKAL 472

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           ELF EMC+ G++P   + I +L+AC H+G V+ GL+Y N M + Y + P  EH+ C+VD+
Sbjct: 473 ELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDL 532

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           LGR+G++ EA E I  +    + G VW ++L AC+  G+ + GK+ AE   + EP   G 
Sbjct: 533 LGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGA 592

Query: 760 YISLSNMYVALGRWKDAVE 778
           +++++N+Y + G+W +A +
Sbjct: 593 HVAMANLYASKGQWHEAAQ 611



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 224/479 (46%), Gaps = 24/479 (5%)

Query: 26  SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQ 85
           +L +F E  +K+VV+W  ++ +          L  F EM   G+  DS      ++A   
Sbjct: 130 ALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACAD 189

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
              L +GR VH    K G+ +   + N    +YA+C D++ +    S M   D  +W T+
Sbjct: 190 AGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTV 249

Query: 146 MSGCLHNNYPEKCLLYF----REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           +S  +     ++ +  F    RE        +  + ++ +AA A +  +  G+ +HA   
Sbjct: 250 ISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAA 309

Query: 202 KLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           + G+  +   SV NSL+++Y++  G + AA+  F     KDVVSW+AII G+A  G  E+
Sbjct: 310 RKGFACA--RSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAED 367

Query: 261 AFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           AF L  EM+       P+  T+ +L+S+CA +  L  GR +H  A+   L +  ++ ++L
Sbjct: 368 AFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSAL 427

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D Y KS S+  A+++F+     +D+VSW +MI G            LF+EM ++  +  
Sbjct: 428 IDMYGKSGSMLDADIVFSHRVK-DDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPD 486

Query: 368 FSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
             T + +L +C     +E G + ++      G          ++ +    G +  A  L+
Sbjct: 487 HVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELI 546

Query: 427 QRISHNS-DTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNASPDSVTLVNVISACGN 483
            +I+ N  D   W  ++ AC   G  +   K   ++M  +   +   V + N+ ++ G 
Sbjct: 547 GKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQ 605



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 161/359 (44%), Gaps = 26/359 (7%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-- 67
           + +L T Y+  S  + +LA       +DV  W  +I+A V+       +  F  M+ E  
Sbjct: 215 ANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRMLREES 274

Query: 68  --GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK-CGDL 124
                 +  T   +++A   +  +  G  +H  + + G     S+ N  V +Y +  G L
Sbjct: 275 SVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRAAGCL 334

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSG-EQADNVSLSSAVA 182
           ++++  F      D VSW+ I+SG       E     FREM   SG  + +  +L+S ++
Sbjct: 335 SAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLS 394

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
             A    L  G+ +H L +  G E   +  + ++LI MY + G +  A+  F      DV
Sbjct: 395 VCATAASLDAGRQLHTLAVAAGLEH--HAMIRSALIDMYGKSGSMLDADIVFSHRVKDDV 452

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS-------LLLR 295
           VSW A+I G+A +G  ++A +L  EM  +  ++PD  T + +++ C  +         L 
Sbjct: 453 VSWTAMIVGYAEHGHSKKALELFQEMCHV-GLKPDHVTFIGVLNACCHAGEVELGLRYLN 511

Query: 296 EGRSVHG-YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP-MNDLVSWNSMI 352
           E   ++G Y  +   G        ++D   ++  +++AE L   IA    D V W S++
Sbjct: 512 EMNQIYGLYPAKEHYG-------CVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLL 563



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 8/265 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY-FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           +GF      + SL+T Y+  +    ++ A+F E+  KDVV+W+A+I+   +         
Sbjct: 311 KGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFA 370

Query: 60  FFGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
            F EM       R +  TL  ++S       L  GR +H L++ AG+   + + +  ++M
Sbjct: 371 LFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDM 430

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K G +  ++  FS     D VSW  ++ G   + + +K L  F+EM   G + D+V+ 
Sbjct: 431 YGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTF 490

Query: 178 SSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              + A    GE+  G + ++ +    G    P       ++ +  + G I  AE     
Sbjct: 491 IGVLNACCHAGEVELGLRYLNEMNQIYGL--YPAKEHYGCVVDLLGRAGRINEAEELIGK 548

Query: 237 MTC--KDVVSWNAIIDGFALNGKFE 259
           +    +D V W +++   A  G+ E
Sbjct: 549 IAANERDGVVWTSLLRACAARGEEE 573


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 154/445 (34%), Positives = 249/445 (55%), Gaps = 21/445 (4%)

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHM 412
            +F   L+  S  + S + +++ + +S  S+ +  +IH   +K L +S+  IG + L+ M
Sbjct: 125 AVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIG-DRLVSM 183

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   G    A  L   +  N D   WN ++   +  G+    +  F  M  +    P+ V
Sbjct: 184 YFKLGYDEDAQRLFDEMP-NRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEV 242

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL++V+SAC  +    EGKSLHG+ +K  M    +V N+LI MYG+   + +AS +FE  
Sbjct: 243 TLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 302

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK 589
              +L +WN M+   + N    + ++LF   +     P++ ++V++L ACT  G+ R  +
Sbjct: 303 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 362

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
            IH ++   GF  +  I++ALL++Y+                 +   AW++M++ Y  H 
Sbjct: 363 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHA 422

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
            G EAI+LF  M   G+     +   LLSACSHSGLV+EG +Y+  M E Y V P  +H+
Sbjct: 423 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY 482

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGRSG+L++AYE IK++P++P  GVWGA+L AC  +G+ ++GK+VAE L  L+P
Sbjct: 483 SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDP 542

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
            +   YI LSN+Y A G W+ A ++
Sbjct: 543 SDHRNYIMLSNIYSAAGLWRXASKV 567



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 210/448 (46%), Gaps = 40/448 (8%)

Query: 60  FFGEMVEEGIRFDS--TTLLIIVSALTQMN--CLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           F G++    +  DS   +L+  +S+ T ++       RV+  L+   G I D       V
Sbjct: 127 FLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDR-----LV 181

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADN 174
           +MY K G    ++  F  M   D VSWN++MSG     Y   CL  F R    SG Q + 
Sbjct: 182 SMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNE 241

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           V+L S V+A A +G L  GK +H + +KLG   S    V NSLI+MY + G ++AA + F
Sbjct: 242 VTLLSVVSACAXMGALDEGKSLHGVVVKLGM--SGKAKVVNSLINMYGKLGFLDAASQLF 299

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M  + +VSWN+++     NG  E+  DL + M+    + PD AT+V L+  C D+ L 
Sbjct: 300 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK-RAGINPDQATMVALLRACTDTGLG 358

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           R+  S+H Y  R     D+++  +L++ Y+K   L+ +E +F  I    D ++W +M++G
Sbjct: 359 RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDTIAWTAMLAG 417

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKL 397
                       LF  M+    +    T   +L +C+    +E GK         ++++ 
Sbjct: 418 YAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEP 477

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ---EA 454
              + +  V+ L       G L  A+ L++ +     +  W  ++ AC   G+ +   E 
Sbjct: 478 RLDHYSCMVDLLG----RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 533

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACG 482
            +   S+    +   + + L N+ SA G
Sbjct: 534 AEQLLSLDPSDHR--NYIMLSNIYSAAG 559



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 196/433 (45%), Gaps = 50/433 (11%)

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           AD++  S   A S+C   +SY   IHA  IK L Y D     + + L+SMY + G  E A
Sbjct: 138 ADSIVQSLVFAISSCT-SVSYCSAIHARVIKSLNYSDG---FIGDRLVSMYFKLGYDEDA 193

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
           +R F  M  +D+VSWN+++ G +  G      +    M+     +P+  T+++++S CA 
Sbjct: 194 QRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAX 253

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              L EG+S+HG  ++  +     ++NSL++ Y K   L  A  LF  + P+  LVSWNS
Sbjct: 254 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM-PVRSLVSWNS 312

Query: 351 MIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           M+              LF  M         +T++A+L +C         +SIH +  + G
Sbjct: 313 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCG 372

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
           F+ + I   AL+++Y   G L A+  + + I  + DT  W  ++     +   +EAIK F
Sbjct: 373 FNADIIIATALLNLYAKLGRLNASEDIFEEIK-DRDTIAWTAMLAGYAVHACGREAIKLF 431

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
             M  ++    D VT  +++SAC +  L  EGK         +M    RV+         
Sbjct: 432 DLMV-KEGVEVDHVTFTHLLSACSHSGLVEEGKKYF-----EIMSEVYRVEP-------- 477

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSA 578
                             L  ++CM+    ++     A EL + +  EP+     ++L A
Sbjct: 478 -----------------RLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGA 520

Query: 579 CTQLGVLRHGKQI 591
           C   G +  GK++
Sbjct: 521 CRVYGNVELGKEV 533



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 148/287 (51%), Gaps = 4/287 (1%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L++ Y  + Y E +  LF E  N+D+V+WN++++       +   L+ F  M  E G + 
Sbjct: 180 LVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQP 239

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TLL +VSA   M  L +G+ +H + +K GM   + + N  +NMY K G L+++   F
Sbjct: 240 NEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLF 299

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M     VSWN+++    HN Y EK +  F  M  +G   D  ++ + + A    G   
Sbjct: 300 EEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 359

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IHA   + G+     + +  +L+++Y++ G + A+E  F  +  +D ++W A++ G
Sbjct: 360 QAESIHAYIHRCGFNAD--IIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAG 417

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           +A++    EA  L  ++ +   VE D  T   L+S C+ S L+ EG+
Sbjct: 418 YAVHACGREAIKLF-DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 463



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y  + + +++  LF E   + +V+WN+M+     N     G+  F  M   GI  
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T++ ++ A T     +Q   +H    + G  AD  +    +N+YAK G LN+SE  F
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   DT++W  +++G   +    + +  F  M   G + D+V+ +  ++A +  G + 
Sbjct: 401 EEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVE 460

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIID 250
            GK    +  ++ Y   P +   + ++ +  + G +E A      M  +     W A++ 
Sbjct: 461 EGKKYFEIMSEV-YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 519

Query: 251 GFALNGKFE 259
              + G  E
Sbjct: 520 ACRVYGNVE 528



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A +  +T+LL  Y+ +    +S  +F E  ++D + W AM+     + C    +  F
Sbjct: 372 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLF 431

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
             MV+EG+  D  T   ++SA +    +++G+
Sbjct: 432 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGK 463


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/488 (32%), Positives = 256/488 (52%), Gaps = 40/488 (8%)

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           Y+    +  A+ +F+ I   N  + WNSMI G            L+ +ML+   +    T
Sbjct: 68  YAVCGHMPYAQHIFDQIVLKNSFL-WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFT 126

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
              +L +C      E G+ +H   +  G   +    N+++ MY   GD+ AA  +  R+ 
Sbjct: 127 YPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRML 186

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D + WN ++    +NG  + A + F  M ++     D  TL+ ++SACG++     G
Sbjct: 187 VR-DLTSWNTMMSGFVKNGEARGAFEVFGDM-RRDGFVGDRTTLLALLSACGDVMDLKVG 244

Query: 491 KSLHGLALKSLMGLDTRV-----QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
           K +HG  +++  G   RV      N++I MY  C  +  A  +FE     ++ +WN +IS
Sbjct: 245 KEIHGYVVRN--GESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLIS 302

Query: 546 AFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            + +     +ALELF  +      P+E++++S+L+AC Q+  LR G  +  +V   G+  
Sbjct: 303 GYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV 362

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           N  + +AL+ MY+NC               K+  A + M++ +G HG+G EAI +F+EM 
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
             G+ P +    ++LSACSHSGLVDEG + +  M  +Y V P   H+ C+VD+LGR+G L
Sbjct: 423 GKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
            EAY  I+N+ ++P   VW A+LSAC  H + K+    A+ LF+L P+ V  Y+ LSN+Y
Sbjct: 483 DEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIY 542

Query: 768 VALGRWKD 775
            A  RW+D
Sbjct: 543 AAERRWED 550



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 224/481 (46%), Gaps = 25/481 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L   Y+   +   +  +F +   K+   WN+MI     N      L  + +M+  G 
Sbjct: 61  ATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQ 120

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D+ T   ++ A   +   + GR VH L +  G+  D  + N  ++MY K GD+ ++  
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D  SWNT+MSG + N         F +M   G   D  +L + ++A   + +
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMD 240

Query: 190 LSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  GK IH   ++ G  +S  V    + NS+I MY  C  +  A + F G+  KDVVSWN
Sbjct: 241 LKVGKEIHGYVVRNG--ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWN 298

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I G+   G   +A +L   M ++ +V PD  TV+++++ C     LR G +V  Y ++
Sbjct: 299 SLISGYEKCGDAFQALELFGRMVVVGAV-PDEVTVISVLAACNQISALRLGATVQSYVVK 357

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
           R    ++++  +L+  Y+   SL  A  +F+ + P  +L +   M++G            
Sbjct: 358 RGYVVNVVVGTALIGMYANCGSLVCACRVFDEM-PEKNLPACTVMVTGFGIHGRGREAIS 416

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS--NNTIGVNALMHM 412
           +F EML            A+L +C+    ++ GK I  +++   +S        + L+ +
Sbjct: 417 IFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF-YKMTRDYSVEPRPTHYSCLVDL 475

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
               G L  A+++++ +    +   W  ++ AC  + + + A+ + + + +    +PD V
Sbjct: 476 LGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFE---LNPDGV 532

Query: 473 T 473
           +
Sbjct: 533 S 533



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 211/472 (44%), Gaps = 42/472 (8%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           +   L + Y+ CG +  A+  F  +  K+   WN++I G+A N     A  L  +M L  
Sbjct: 60  LATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKM-LHF 118

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
             +PD  T   ++  C D LL   GR VH   +   L  D+ + NS++  Y K   +  A
Sbjct: 119 GQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAA 178

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSF----STLLAILPSCNS 380
            ++F+ +  + DL SWN+M+SG  K        E+     +  F    +TLLA+L +C  
Sbjct: 179 RVVFDRML-VRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGD 237

Query: 381 PESLEFGKSIHCWQLKLGFSN---NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
              L+ GK IH + ++ G S    N   +N+++ MY NC  +  A  L + +    D   
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGL-RVKDVVS 296

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN +I    + G   +A++ F  M     A PD VT+++V++AC  +     G ++    
Sbjct: 297 WNSLISGYEKCGDAFQALELFGRMV-VVGAVPDEVTVISVLAACNQISALRLGATVQSYV 355

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +K    ++  V  ALI MY  C  +  A  VF+     NL     M++ F  +     A+
Sbjct: 356 VKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAI 415

Query: 558 ELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQI-HGHVFHLGFQENSFISSALLDM 613
            +F  +      P+E    ++LSAC+  G++  GK+I +        +      S L+D 
Sbjct: 416 SIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVD- 474

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       ++   GY  + +  IE      N  ++P +    +LLSAC
Sbjct: 475 ------------LLGRAGYLDEAYAVIE------NMKLKPNEDVWTALLSAC 508


>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 162/427 (37%), Positives = 239/427 (55%), Gaps = 27/427 (6%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           A+L + NS  S+   + IH    K L + +  IG + L+  Y   G    A  L   + H
Sbjct: 44  ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIG-DQLVTCYNKLGYAEDALKLFDDMPH 102

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEG 490
             D   WN +I   ++  H   ++  F +M  + +  P+ VT++++ISAC G L+    G
Sbjct: 103 K-DLVSWNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISACSGALD---AG 156

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +HG  +K    L+ +V N+LI MYG+  D+ SA  +FE+  + N  +WN +I+A   N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216

Query: 551 KAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                 ++ F   R L  E +E +I+++L AC  LGV +  + IHG +F  GF     I+
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +ALLD Y+                     AW++M++ Y  HG G EAI+LF  M N G+ 
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   +   LLSACSHSGLV+EG  Y+N M E Y + P  +H+ C+VD+LGR G L +AYE
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I+N+P++P  GVWGA+L AC  HG+ ++GK+VAE L  +EP +   YI LSNMY A   
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456

Query: 773 WKDAVEI 779
           WKDA ++
Sbjct: 457 WKDAAKV 463



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 211/453 (46%), Gaps = 57/453 (12%)

Query: 181 VAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           +A ++C   +S  + IHA   K L Y D     + + L++ Y++ G  E A + F  M  
Sbjct: 47  IAVNSC-PSISNCREIHARVFKSLLYRDG---FIGDQLVTCYNKLGYAEDALKLFDDMPH 102

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD+VSWN++I GF+       +    + M+   SV+P+  T++++IS C+ +  L  G+ 
Sbjct: 103 KDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACSGA--LDAGKY 158

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG+ I+     ++ + NSL++ Y KS  L+ A  LF AI P  + VSWNS+I+      
Sbjct: 159 IHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI-PDPNTVSWNSIIAAQVTNG 217

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F +M  L  +    T+LA+L +C      +  +SIH      GF        
Sbjct: 218 CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT 277

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y   G L A++ +   +   +D   W  ++     +G  +EAIK F+SM   +  
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMA-NKGL 335

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD VT  +++SAC +  L  EGKS   + +  + G++ RV +                 
Sbjct: 336 EPDHVTFTHLLSACSHSGLVNEGKSYFNV-MSEVYGIEPRVDH----------------- 377

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       ++CM+    +      A E+ +++  EPN     ++L AC   G +  
Sbjct: 378 ------------YSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIEL 425

Query: 588 GKQIHGHVFHL-GFQENSFISSALLDMYSNCKS 619
           GK++  H+ ++      ++I   L +MYS  +S
Sbjct: 426 GKEVAEHLINMEPLDPRNYI--MLSNMYSASRS 456



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 151/288 (52%), Gaps = 8/288 (2%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L+T Y+ + Y E +L LF +  +KD+V+WN++I+    +RC+ M L  F  M  E  ++ 
Sbjct: 80  LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKP 137

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T+L ++SA +    L  G+ +H   IK G   +  + N  +NMY K GDL S+   F
Sbjct: 138 NEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   +TVSWN+I++  + N    + + YF +M   G + D  ++ + + A   LG   
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IH L    G+     +++  +L+  Y++ G + A+   F  +   D V+W A++ G
Sbjct: 256 LAESIHGLMFCTGF--GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +A +G   EA  L   M   + +EPD  T   L+S C+ S L+ EG+S
Sbjct: 314 YAAHGLGREAIKLFESMA-NKGLEPDHVTFTHLLSACSHSGLVNEGKS 360



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 193/426 (45%), Gaps = 34/426 (7%)

Query: 74  TTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + LLI V++   + NC    R +H    K+ +  D  + +  V  Y K G    +   F 
Sbjct: 43  SALLIAVNSCPSISNC----REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 133 GMHCADTVSWNTIMSG---CLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLG 188
            M   D VSWN+++SG   CLH +     L  F  M +    + + V++ S +  SAC G
Sbjct: 99  DMPHKDLVSWNSLISGFSRCLHMS-----LTAFYTMKFEMSVKPNEVTILSMI--SACSG 151

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK IH  GIK+G   +  V V NSLI+MY + GD+ +A R F  +   + VSWN+I
Sbjct: 152 ALDAGKYIHGFGIKVG--GTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     NG   E  D  ++M+ +  +E D  T++ L+  C    + +   S+HG      
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRL-GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
            G  + +  +L+D Y+K   LS +  +F  +    D V+W +M++G            LF
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVG-FADRVAWTAMLAGYAAHGLGREAIKLF 327

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
           + M     +    T   +L +C+    +  GKS  +      G        + ++ +   
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGR 387

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-DSVTL 474
           CG L  A+ ++Q +    +   W  ++ AC  +G+ +   +  + +   +   P + + L
Sbjct: 388 CGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIML 447

Query: 475 VNVISA 480
            N+ SA
Sbjct: 448 SNMYSA 453



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 236/542 (43%), Gaps = 60/542 (11%)

Query: 243 VSWNA-IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + WN+ I+  F +  + +    L     L+R      A V  L+        +   R +H
Sbjct: 3   LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIVSALLIAVNSCPSISNCREIH 62

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
               + LL  D  + + L+  Y+K      A  LF+ + P  DLVSWNS+ISG F   L+
Sbjct: 63  ARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDM-PHKDLVSWNSLISG-FSRCLH 120

Query: 362 L------CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +        +F  S      T+L+++ +C+   +L+ GK IH + +K+G +      N+L
Sbjct: 121 MSLTAFYTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSL 178

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY   GDL +A  L + I  + +T  WN +I A   NG  +E I  F  M ++     
Sbjct: 179 INMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNGCAREGIDYFNKM-RRLGIEQ 236

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T++ ++ AC +L +    +S+HGL   +  G    +  AL+  Y +   + ++  VF
Sbjct: 237 DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVF 296

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                 +   W  M++ ++ +     A++LF  +     EP+ ++   +LSAC+  G++ 
Sbjct: 297 TEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVN 356

Query: 587 HGK---QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
            GK    +   V+  G +      S ++D+   C             G     +E I+  
Sbjct: 357 EGKSYFNVMSEVY--GIEPRVDHYSCMVDLLGRC-------------GLLNDAYEVIQ-- 399

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
               N  + P      +LL AC   G ++ G +   +++    + P   +++ + +M   
Sbjct: 400 ----NMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDP--RNYIMLSNMYSA 453

Query: 704 SGKLQEAYE---FIKNLPIQPKPGVWGAMLSACSHH---GDT------KMGKQVAELLFK 751
           S   ++A +    +K   ++  PG         +HH   GD       K+  ++ ELL K
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513

Query: 752 LE 753
           + 
Sbjct: 514 IR 515



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 2/271 (0%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +  + SL+  Y       S+  LF    + + V+WN++I A V N C   G+ +F +M  
Sbjct: 172 VKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRR 231

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            GI  D  T+L ++ A   +   K    +H L    G  A  ++    ++ YAK G L++
Sbjct: 232 LGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSA 291

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           S   F+ +  AD V+W  +++G   +    + +  F  M   G + D+V+ +  ++A + 
Sbjct: 292 SYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSH 351

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW 245
            G ++ GK    +  ++ Y   P V   + ++ +  +CG +  A      M  + +   W
Sbjct: 352 SGLVNEGKSYFNVMSEV-YGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
            A++    ++G  E   ++   +  M  ++P
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDP 441


>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 195/627 (31%), Positives = 320/627 (51%), Gaps = 45/627 (7%)

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A A L  L  G+ I A  +K G+E   +VSV NS+   Y +CGD+ +  R F  M  +D 
Sbjct: 56  ACAKLSWLFQGRCIQASLLKRGFE--SFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDS 113

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSWN I+ G    G  EE      ++++    EP+ +T+V +I  C    L  +G  +HG
Sbjct: 114 VSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GFEPNTSTLVLVIHACRS--LWFDGEKIHG 170

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           Y IR        + NS++  Y+ S+SLS A  LF+ ++   D++SW+ +I          
Sbjct: 171 YVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE-RDVISWSVVIRSYVQSKEPV 228

Query: 355 ----LFKEMLYLC-SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NA 408
               LFKEM++   ++    T+ ++L +C   E ++ G+S+H + ++ GF    + V N+
Sbjct: 229 VGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNS 288

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY    D+ +AF +    +  +  S WN ++     N  + EA++ F  M Q+    
Sbjct: 289 LIDMYSKGFDVDSAFRVFDETTCRNIVS-WNSILAGFVHNQRYDEALEMFHLMVQEA-VE 346

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D VT+V+++  C   E     KS+HG+ ++     +    ++LI  Y  C  +  A TV
Sbjct: 347 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 406

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
            +S    ++ + + MIS  +       A+ +F H+   PN I+++S+L+AC+    LR  
Sbjct: 407 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTS 466

Query: 589 KQIHGHVFHLGFQENSF-ISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           K  HG         N   + ++++D Y+ C               K+  +W+ +ISAY  
Sbjct: 467 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 526

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G   +A+ LF EM   G  P   + ++ LSAC+H GLV +GL  + +M+EE D +P  +
Sbjct: 527 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQ 585

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKM--GKQVAEL 748
           H+ CIVDML R+G++  A E IKNLP   K G   WGA+LS C +     +   + VAE+
Sbjct: 586 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 645

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKD 775
           L +LEP     Y+  S+ + A   W+D
Sbjct: 646 L-ELEPLCSSGYLLASSTFAAEKSWED 671



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 288/585 (49%), Gaps = 36/585 (6%)

Query: 52  RCVVMGLHFFGEMVEEGIRF-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           R VV G   + E+   G++F D     I+  A  +++ L QGR +    +K G  +  S+
Sbjct: 28  REVVSG---YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVSV 84

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE 170
            N   + Y KCGDL S    F  M+  D+VSWN I+ G L   + E+ L +F ++   G 
Sbjct: 85  GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 144

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           + +  +L   +   AC      G+ IH   I+ G+      SV NS++ MY+   D  +A
Sbjct: 145 EPNTSTL--VLVIHACRSLWFDGEKIHGYVIRSGF--CGISSVQNSILCMYAD-SDSLSA 199

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
            + F  M+ +DV+SW+ +I  +  + +      L  EM      EPD  TV +++  C  
Sbjct: 200 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 259

Query: 291 SLLLREGRSVHGYAIRRLLGYDL---LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
              +  GRSVHG++IRR  G+DL    + NSL+D YSK   +  A  +F+     N +VS
Sbjct: 260 MEDIDVGRSVHGFSIRR--GFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN-IVS 316

Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
           WNS+++G           EM +L  Q +      T++++L  C   E     KSIH   +
Sbjct: 317 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 376

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           + G+ +N + +++L+  Y +C  +  A ++L  +++    SC + +I      G   EAI
Sbjct: 377 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC-STMISGLAHAGRSDEAI 435

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALIT 514
             F  M      +P+++T++++++AC         K  HG+A++  + + D  V  +++ 
Sbjct: 436 SIFCHMRD----TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 491

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEIS 571
            Y +C  I+ A   F+     N+ +W  +ISA++ N    +AL LF  ++   + PN ++
Sbjct: 492 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 551

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
            ++ LSAC   G+++ G  I   +     + +    S ++DM S 
Sbjct: 552 YLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSR 596



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 268/540 (49%), Gaps = 27/540 (5%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF + +    S+   Y       S L  F    ++D V+WN ++   ++      GL +
Sbjct: 76  RGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWW 135

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F ++   G   +++TL++++ A   +     G  +H   I++G    SS+ N  + MYA 
Sbjct: 136 FSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD 193

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
              L++ +  F  M   D +SW+ ++   + +  P   L  F+EM    + + D V+++S
Sbjct: 194 SDSLSARK-LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 252

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A   + ++  G+ +H   I+ G+ D   V V NSLI MYS+  D+++A R F   TC
Sbjct: 253 VLKACTVMEDIDVGRSVHGFSIRRGF-DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC 311

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +++VSWN+I+ GF  N +++EA ++ H M +  +VE D  TVV+L+ +C         +S
Sbjct: 312 RNIVSWNSILAGFVHNQRYDEALEMFHLM-VQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 370

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
           +HG  IRR    + + ++SL+D Y+  + +  A  + +++    D+VS ++MISGL    
Sbjct: 371 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT-YKDVVSCSTMISGLAHAG 429

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NAL 409
                     ++    +  T++++L +C+    L   K  H   ++   + N I V  ++
Sbjct: 430 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI 489

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y  CG +  A     +I+  +  S W ++I A   NG   +A+  F  M +Q+  +P
Sbjct: 490 VDAYAKCGAIEMARRTFDQITEKNIIS-WTVIISAYAINGLPDKALALFDEM-KQKGYTP 547

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ----NALITMYGRCRDIKSA 525
           ++VT +  +SAC +  L  +G     +  KS++  D +      + ++ M  R  +I +A
Sbjct: 548 NAVTYLAALSACNHGGLVKKGL----MIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 603



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 231/485 (47%), Gaps = 27/485 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        S+L  Y++     S+  LF E   +DV++W+ +I + V+++  V+GL  F
Sbjct: 176 GFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLF 234

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYA 119
            EMV E     D  T+  ++ A T M  +  GR VH  SI+ G  +AD  +CN  ++MY+
Sbjct: 235 KEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYS 294

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K  D++S+   F    C + VSWN+I++G +HN   ++ L  F  M     + D V++ S
Sbjct: 295 KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS 354

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +       +    K IH + I+ GYE +      +SLI  Y+ C  ++ A      MT 
Sbjct: 355 LLRVCKFFEQPLPCKSIHGVIIRRGYESNEV--ALSSLIDAYTSCSLVDDAGTVLDSMTY 412

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDVVS + +I G A  G+ +EA  +   M+      P+  TV++L++ C+ S  LR  + 
Sbjct: 413 KDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKW 468

Query: 300 VHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            HG AIRR L   D+ +  S++D Y+K  ++  A   F+ I   N ++SW  +IS     
Sbjct: 469 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKN-IISWTVIISAYAIN 527

Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   LF EM       +  T LA L +CN    ++ G  I    ++     +    
Sbjct: 528 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY 587

Query: 407 NALMHMYINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           + ++ M    G++  A  L++ +  +  +  S W  ++  C     F++ I T + + + 
Sbjct: 588 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC--RNRFKKLIITSEVVAEV 645

Query: 465 QNASP 469
               P
Sbjct: 646 LELEP 650



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 23/391 (5%)

Query: 1   RGF-LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           RGF LA +    SL+  YS     +S+  +F ET  +++V+WN+++   V N+     L 
Sbjct: 276 RGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE 335

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVN 116
            F  MV+E +  D  T   +VS L      +Q    + +H + I+ G  ++    +  ++
Sbjct: 336 MFHLMVQEAVEVDEVT---VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLID 392

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            Y  C  ++ +      M   D VS +T++SG  H    ++ +  F  M  +      +S
Sbjct: 393 AYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVIS 452

Query: 177 LSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           L +A + SA   +L   K  H + I+  L   D   +SV  S++  Y++CG IE A R F
Sbjct: 453 LLNACSVSA---DLRTSKWAHGIAIRRSLAIND---ISVGTSIVDAYAKCGAIEMARRTF 506

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +T K+++SW  II  +A+NG  ++A  L  EM+  +   P+  T +  +S C    L+
Sbjct: 507 DQITEKNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLV 565

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA-ELLFNAIAPMNDLVS-WNSMI 352
           ++G  +    +       L   + ++D  S++  +  A EL+ N    +    S W +++
Sbjct: 566 KKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 625

Query: 353 SG---LFKEMLYLCSQFSFSTLLAILPSCNS 380
           SG    FK+++ + S+   + +L + P C+S
Sbjct: 626 SGCRNRFKKLI-ITSEV-VAEVLELEPLCSS 654



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 20/245 (8%)

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           +G ++E +  +  + +      D      V  AC  L   F+G+ +    LK        
Sbjct: 24  SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVS 83

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V N++   Y +C D+ S    F+   + +  +WN ++        E   L  F  L    
Sbjct: 84  VGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 143

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA-- 622
           FEPN  ++V ++ AC  L     G++IHG+V   GF   S + +++L MY++  S +A  
Sbjct: 144 FEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARK 201

Query: 623 ------------WSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSG 669
                       WS +I +Y    +    ++LF EM +     P   +V S+L AC+   
Sbjct: 202 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 261

Query: 670 LVDEG 674
            +D G
Sbjct: 262 DIDVG 266


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 165/541 (30%), Positives = 289/541 (53%), Gaps = 48/541 (8%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +V+++ +C    L  +G  VH Y ++   G +L+  N L+D Y K      A  +F+++ 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM- 67

Query: 341 PMNDLVSWNSMISG------------LFKEM----LYLCSQFSFSTLLAILPSCNSPESL 384
           P  ++VSW++++SG            LF EM    +Y  ++F+FST    L +C    +L
Sbjct: 68  PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFST---NLKACGLLNAL 123

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           E G  IH + LK+GF       N+L+ MY  CG +  A  + +RI   S  S WN +I  
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS-WNAMIAG 182

Query: 445 CTQNGHFQEAIKTFKSMTQQQN--ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
               G+  +A+ TF  M Q+ N    PD  TL +++ AC +  + + GK +HG  ++S  
Sbjct: 183 FVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241

Query: 503 GLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
              +   +  +L+ +Y +C  + SA   F+      + +W+ +I  ++Q    V A+ LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301

Query: 561 RHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
           + L+   ++I   ++ SI+       +LR GKQ+      L     + + ++++DMY  C
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361

Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                          K   +W+ +I+ YG HG G +++ +F+EM    I P +   +++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SACSHSG++ EG + ++ +LE + ++P  EH+ C+VD+LGR+G+L+EA   I  +PI+P 
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD---AVEI 779
            G+W  +LS C  HGD ++GK+V ++L +++ +N   Y+ +SN+Y   G W +   A E+
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541

Query: 780 G 780
           G
Sbjct: 542 G 542



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 234/493 (47%), Gaps = 34/493 (6%)

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           L+ I+   T+     QG  VHC  +K+G   +    N  ++MY KC +   +   F  M 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + VSW+ +MSG + N   +  L  F EMG  G   +  + S+ + A   L  L  G  
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH   +K+G+E    V V NSL+ MYS+CG I  AE+ F  +  + ++SWNA+I GF   
Sbjct: 129 IHGFCLKIGFE--MMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186

Query: 256 GKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--- 311
           G   +A D    MQ     E PD  T+ +L+  C+ + ++  G+ +HG+ +R   G+   
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS--GFHCP 244

Query: 312 -DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFKE 358
               +  SL+D Y K   L  A   F+ I     ++SW+S+I             GLFK 
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEGEFVEAMGLFKR 303

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           +  L SQ     L +I+        L  GK +    +KL     T  +N+++ MY+ CG 
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363

Query: 419 LVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           +  A   F+ +Q      D   W +VI    ++G  +++++ F  M  + N  PD V  +
Sbjct: 364 VDEAEKCFAEMQL----KDVISWTVVITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYL 418

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC- 532
            V+SAC +  +  EG+ L    L++  G+  RV++   ++ + GR   +K A  + ++  
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLET-HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477

Query: 533 YNCNLCTWNCMIS 545
              N+  W  ++S
Sbjct: 478 IKPNVGIWQTLLS 490



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 236/499 (47%), Gaps = 30/499 (6%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           +L TS  L+  Y        +  +F     ++VV+W+A+++  V N  +   L  F EM 
Sbjct: 40  NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            +GI  +  T    + A   +N L++G  +H   +K G      + N  V+MY+KCG +N
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG--EQADNVSLSSAVAA 183
            +E  F  +     +SWN +++G +H  Y  K L  F  M  +   E+ D  +L+S + A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            +  G +  GK IH   ++ G+      ++T SL+ +Y +CG + +A +AF  +  K ++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW+++I G+A  G+F EA  L   +Q + S + D   + ++I + AD  LLR+G+ +   
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQAL 338

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           A++   G +  ++NS++D Y K   + +AE  F A   + D++SW  +I+G         
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF-AEMQLKDVISWTVVITGYGKHGLGKK 397

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              +F EML    +      LA+L +C+    ++ G+ +    L+      T G+   + 
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE------THGIKPRVE 451

Query: 412 MYINCGDLVAAFSLLQRISHNSDT-------SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
            Y    DL+     L+   H  DT         W  ++  C  +G  +   +  K + + 
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511

Query: 465 QNASP-DSVTLVNVISACG 482
              +P + V + N+    G
Sbjct: 512 DAKNPANYVMMSNLYGQAG 530



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 172/365 (47%), Gaps = 24/365 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    SL+  YS       +  +F    ++ +++WNAMI   V        L  F
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF 196

Query: 62  GEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS--LCNVFVNM 117
           G M E  I  R D  TL  ++ A +    +  G+ +H   +++G    SS  +    V++
Sbjct: 197 GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDL 256

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y KCG L S+   F  +     +SW++++ G        + +  F+ +     Q D+ +L
Sbjct: 257 YVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 316

Query: 178 SSAVAASACLGELSYGKVIHALGIKL--GYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           SS +   A    L  GK + AL +KL  G E     SV NS++ MY +CG ++ AE+ F 
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLE----TSVLNSVVDMYLKCGLVDEAEKCFA 372

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M  KDV+SW  +I G+  +G  +++  + +EM L  ++EPD    + ++S C+ S +++
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIK 431

Query: 296 EGRSV-------HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           EG  +       HG   R      +     ++D   ++  L +A+ L + +    ++  W
Sbjct: 432 EGEELFSKLLETHGIKPR------VEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485

Query: 349 NSMIS 353
            +++S
Sbjct: 486 QTLLS 490



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 20/272 (7%)

Query: 2   GFLA----HLPTST----SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRC 53
           GFL     H P+S     SL+  Y    Y  S+   F +   K +++W+++I    +   
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293

Query: 54  VVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
            V  +  F  + E   + DS  L  I+        L+QG+ +  L++K     ++S+ N 
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            V+MY KCG ++ +E  F+ M   D +SW  +++G   +   +K +  F EM     + D
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413

Query: 174 NV---SLSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
            V   ++ SA + S  +  GE  + K++   GIK      P V     ++ +  + G ++
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK------PRVEHYACVVDLLGRAGRLK 467

Query: 229 AAERAFWGMTCKDVVS-WNAIIDGFALNGKFE 259
            A+     M  K  V  W  ++    ++G  E
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 20/188 (10%)

Query: 567 PNEI-SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN----- 620
           PN+  ++VSIL  CT+ G+   G Q+H ++   G   N   S+ L+DMY  C+       
Sbjct: 3   PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62

Query: 621 ----------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                      +WS+++S +  +G    ++ LF EM   GI P + +  + L AC     
Sbjct: 63  VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122

Query: 671 VDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           +++GLQ +   L+  +++  E  +   +VDM  + G++ EA +  + + +      W AM
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179

Query: 730 LSACSHHG 737
           ++   H G
Sbjct: 180 IAGFVHAG 187


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/436 (34%), Positives = 243/436 (55%), Gaps = 22/436 (5%)

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
           +QF+FS+   IL +  +   +  G+ +H    K GF  N     AL+ MY  C D+ +A 
Sbjct: 9   NQFTFSS---ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAV 65

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +  ++   +  S WN +IV    N  +  A+  FK + +++   P+ V++ +V+SAC N
Sbjct: 66  RVFDQMPERNLVS-WNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           +     G+ +HG+ +K  +   T V N+L+ MY +CR       +F+   + ++ TWN +
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184

Query: 544 ISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           +  F QN     A   F  +  E   P+E S  ++L +   L  L  G  IH  +  LG+
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244

Query: 601 QENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHE 645
            +N  I  +L+ MY+ C S                 +W++MISAY  HG   + IELF  
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEH 304

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M + GI P+  + + +LSACSH+G V+EGL ++N+M + +D+ P  EH+ C+VD+LGR+G
Sbjct: 305 MLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAG 364

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            L EA  FI+++P++P P VWGA+L AC  +G+ KMG++ AE LF++EP N G Y+ L+N
Sbjct: 365 WLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLAN 424

Query: 766 MYVALGRWKDAVEIGK 781
           M    GR ++A E+ +
Sbjct: 425 MCTRSGRLEEANEVRR 440



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 215/445 (48%), Gaps = 35/445 (7%)

Query: 75  TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
           T   I+SA      +  G+ +H L  K G  A+  +    V+MYAKC D++S+   F  M
Sbjct: 12  TFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQM 71

Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELSYG 193
              + VSWN+++ G  HNN  ++ +  F+++        N VS+SS ++A A +G L++G
Sbjct: 72  PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 131

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + +H + +K G    P   V NSL+ MY +C   +   + F  +  +DVV+WN ++ GF 
Sbjct: 132 RQVHGVVVKFGL--VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 189

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-- 311
            N KFEEA +    M+    + PD A+  T++   A    L +G ++H   I+  LGY  
Sbjct: 190 QNDKFEEACNYFWVMR-REGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK--LGYVK 246

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++ ++ SL+  Y+K  SL  A  +F  I   N ++SW +MIS             LF+ M
Sbjct: 247 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHN-VISWTAMISAYQLHGCANQVIELFEHM 305

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFG-------KSIHCWQLKLGFSNNTIGVNALMHM 412
           L    + S  T + +L +C+    +E G       K IH   +  G  +    V+ L   
Sbjct: 306 LSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH--DMNPGPEHYACMVDLLG-- 361

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-DS 471
               G L  A   ++ +      S W  ++ AC + G+ +   +  + + + +  +P + 
Sbjct: 362 --RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNY 419

Query: 472 VTLVNVISACGNLELAFEGKSLHGL 496
           V L N+ +  G LE A E + L G+
Sbjct: 420 VLLANMCTRSGRLEEANEVRRLMGV 444



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 216/449 (48%), Gaps = 33/449 (7%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M  SG   +  + SS ++ASA    + +G+ +H+L  K G++ + +V    +L+ MY++C
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGT--ALVDMYAKC 58

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
            D+ +A R F  M  +++VSWN++I GF  N  ++ A  +  ++   ++V P+  +V ++
Sbjct: 59  ADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSV 118

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +S CA+   L  GR VHG  ++  L     +MNSLMD Y K     +   LF  +    D
Sbjct: 119 LSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGD-RD 177

Query: 345 LVSWNSMISGLFKEMLY---------------LCSQFSFSTLLAILPSCNSPESLEFGKS 389
           +V+WN ++ G  +   +               L  + SFST   +L S  S  +L  G +
Sbjct: 178 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFST---VLHSSASLAALHQGTA 234

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           IH   +KLG+  N   + +L+ MY  CG LV A+ + + I  ++  S W  +I A   +G
Sbjct: 235 IHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVIS-WTAMISAYQLHG 293

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
              + I+ F+ M   +   P  VT V V+SAC +     EG + H  ++K +  ++   +
Sbjct: 294 CANQVIELFEHML-SEGIEPSHVTFVCVLSACSHTGRVEEGLA-HFNSMKKIHDMNPGPE 351

Query: 510 N--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA---FSQNKAEVRALELFRHL 563
           +   ++ + GR   +  A    ES         W  ++ A   +   K    A E  R  
Sbjct: 352 HYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAE--RLF 409

Query: 564 EFEP-NEISIVSILSACTQLGVLRHGKQI 591
           E EP N  + V + + CT+ G L    ++
Sbjct: 410 EMEPYNPGNYVLLANMCTRSGRLEEANEV 438



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 4/297 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A++   T+L+  Y+  +   S++ +F +   +++V+WN+MI     N      +  F
Sbjct: 40  GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 99

Query: 62  GEMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            +++ E+ +  +  ++  ++SA   M  L  GR VH + +K G++  + + N  ++MY K
Sbjct: 100 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFK 159

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           C   +     F  +   D V+WN ++ G + N+  E+   YF  M   G   D  S S+ 
Sbjct: 160 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 219

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + +SA L  L  G  IH   IKLGY  +  + +  SLI+MY++CG +  A + F G+   
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYVKN--MCILGSLITMYAKCGSLVDAYQVFEGIEDH 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +V+SW A+I  + L+G   +  +L   M L   +EP   T V ++S C+ +  + EG
Sbjct: 278 NVISWTAMISAYQLHGCANQVIELFEHM-LSEGIEPSHVTFVCVLSACSHTGRVEEG 333



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 17/304 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y    +F+  + LF    ++DVVTWN ++   V+N       ++F  M  EGI  
Sbjct: 152 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILP 211

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  +   ++ +   +  L QG  +H   IK G + +  +    + MYAKCG L  +   F
Sbjct: 212 DEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF 271

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+   + +SW  ++S    +    + +  F  M   G +  +V+    ++A +  G + 
Sbjct: 272 EGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 331

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIID 250
            G + H   +K  ++ +P       ++ +  + G ++ A+R    M  K   S W A++ 
Sbjct: 332 EG-LAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 390

Query: 251 GFALNGKFE---EAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIR 306
                G  +   EA + L EM      EP +    V L ++C      R GR      +R
Sbjct: 391 ACRKYGNLKMGREAAERLFEM------EPYNPGNYVLLANMCT-----RSGRLEEANEVR 439

Query: 307 RLLG 310
           RL+G
Sbjct: 440 RLMG 443



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 16/128 (12%)

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
           PN+ +  SILSA     ++ HG+Q+H  +   GF  N F+ +AL+DMY+ C         
Sbjct: 8   PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67

Query: 618 ------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGL 670
                 ++  +W+SMI  + ++     A+ +F ++     + P + SV S+LSAC++ G 
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127

Query: 671 VDEGLQYY 678
           ++ G Q +
Sbjct: 128 LNFGRQVH 135


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 162/427 (37%), Positives = 239/427 (55%), Gaps = 27/427 (6%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           A+L + NS  S+   + IH    K L + +  IG + L+  Y   G    A  L   + H
Sbjct: 44  ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIG-DQLVTCYNKLGYAEDALKLFDDMPH 102

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEG 490
             D   WN +I   ++  H   ++  F +M  + +  P+ VT++++ISAC G L+    G
Sbjct: 103 K-DLVSWNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISACNGALD---AG 156

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K +HG  +K    L+ +V N+LI MYG+  D+ SA  +FE+  + N  +WN +I+A   N
Sbjct: 157 KYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTN 216

Query: 551 KAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
                 ++ F   R L  E +E +I+++L AC  LGV +  + IHG +F  GF     I+
Sbjct: 217 GCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIA 276

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +ALLD Y+                     AW++M++ Y  HG G EAI+LF  M N G+ 
Sbjct: 277 TALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   +   LLSACSHSGLV+EG  Y+N M E Y + P  +H+ C+VD+LGR G L +AYE
Sbjct: 337 PDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYE 396

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I+N+P++P  GVWGA+L AC  HG+ ++GK+VAE L  +EP +   YI LSNMY A   
Sbjct: 397 VIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRS 456

Query: 773 WKDAVEI 779
           WKDA ++
Sbjct: 457 WKDAAKV 463



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 210/453 (46%), Gaps = 57/453 (12%)

Query: 181 VAASACLGELSYGKVIHALGIK-LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           +A ++C   +S  + IHA   K L Y D     + + L++ Y++ G  E A + F  M  
Sbjct: 47  IAVNSC-PSISNCREIHARVFKSLLYRDG---FIGDQLVTCYNKLGYAEDALKLFDDMPH 102

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD+VSWN++I GF+       +    + M+   SV+P+  T++++IS C  +  L  G+ 
Sbjct: 103 KDLVSWNSLISGFSRC--LHMSLTAFYTMKFEMSVKPNEVTILSMISACNGA--LDAGKY 158

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG+ I+     ++ + NSL++ Y KS  L+ A  LF AI P  + VSWNS+I+      
Sbjct: 159 IHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI-PDPNTVSWNSIIAAQVTNG 217

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F +M  L  +    T+LA+L +C      +  +SIH      GF        
Sbjct: 218 CAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIAT 277

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+  Y   G L A++ +   +   +D   W  ++     +G  +EAIK F+SM   +  
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMA-NKGL 335

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            PD VT  +++SAC +  L  EGKS   + +  + G++ RV +                 
Sbjct: 336 EPDHVTFTHLLSACSHSGLVNEGKSYFNV-MSEVYGIEPRVDH----------------- 377

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                       ++CM+    +      A E+ +++  EPN     ++L AC   G +  
Sbjct: 378 ------------YSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIEL 425

Query: 588 GKQIHGHVFHL-GFQENSFISSALLDMYSNCKS 619
           GK++  H+ ++      ++I   L +MYS  +S
Sbjct: 426 GKEVAEHLINMEPLDPRNYI--MLSNMYSASRS 456



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 150/288 (52%), Gaps = 8/288 (2%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEEGIRF 71
           L+T Y+ + Y E +L LF +  +KD+V+WN++I+    +RC+ M L  F  M  E  ++ 
Sbjct: 80  LVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGF--SRCLHMSLTAFYTMKFEMSVKP 137

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T+L ++SA      L  G+ +H   IK G   +  + N  +NMY K GDL S+   F
Sbjct: 138 NEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLF 195

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   +TVSWN+I++  + N    + + YF +M   G + D  ++ + + A   LG   
Sbjct: 196 EAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGK 255

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + IH L    G+     +++  +L+  Y++ G + A+   F  +   D V+W A++ G
Sbjct: 256 LAESIHGLMFCTGF--GAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +A +G   EA  L   M   + +EPD  T   L+S C+ S L+ EG+S
Sbjct: 314 YAAHGLGREAIKLFESMA-NKGLEPDHVTFTHLLSACSHSGLVNEGKS 360



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 129/542 (23%), Positives = 236/542 (43%), Gaps = 60/542 (11%)

Query: 243 VSWNA-IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           + WN+ I+  F +  + +    L     L+R      A V  L+        +   R +H
Sbjct: 3   LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIVSALLIAVNSCPSISNCREIH 62

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
               + LL  D  + + L+  Y+K      A  LF+ + P  DLVSWNS+ISG F   L+
Sbjct: 63  ARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDM-PHKDLVSWNSLISG-FSRCLH 120

Query: 362 L------CSQFSFS------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +        +F  S      T+L+++ +CN   +L+ GK IH + +K+G +      N+L
Sbjct: 121 MSLTAFYTMKFEMSVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANSL 178

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++MY   GDL +A  L + I  + +T  WN +I A   NG  +E I  F  M ++     
Sbjct: 179 INMYGKSGDLTSACRLFEAIP-DPNTVSWNSIIAAQVTNGCAREGIDYFNKM-RRLGIEQ 236

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T++ ++ AC +L +    +S+HGL   +  G    +  AL+  Y +   + ++  VF
Sbjct: 237 DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVF 296

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLR 586
                 +   W  M++ ++ +     A++LF  +     EP+ ++   +LSAC+  G++ 
Sbjct: 297 TEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVN 356

Query: 587 HGK---QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
            GK    +   V+  G +      S ++D+   C             G     +E I+  
Sbjct: 357 EGKSYFNVMSEVY--GIEPRVDHYSCMVDLLGRC-------------GLLNDAYEVIQ-- 399

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
               N  + P      +LL AC   G ++ G +   +++    + P   +++ + +M   
Sbjct: 400 ----NMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDP--RNYIMLSNMYSA 453

Query: 704 SGKLQEAYE---FIKNLPIQPKPGVWGAMLSACSHH---GDT------KMGKQVAELLFK 751
           S   ++A +    +K   ++  PG         +HH   GD       K+  ++ ELL K
Sbjct: 454 SRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGK 513

Query: 752 LE 753
           + 
Sbjct: 514 IR 515



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 193/426 (45%), Gaps = 34/426 (7%)

Query: 74  TTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + LLI V++   + NC    R +H    K+ +  D  + +  V  Y K G    +   F 
Sbjct: 43  SALLIAVNSCPSISNC----REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFD 98

Query: 133 GMHCADTVSWNTIMSG---CLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAASACLG 188
            M   D VSWN+++SG   CLH +     L  F  M +    + + V++ S +  SAC G
Sbjct: 99  DMPHKDLVSWNSLISGFSRCLHMS-----LTAFYTMKFEMSVKPNEVTILSMI--SACNG 151

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  GK IH  GIK+G   +  V V NSLI+MY + GD+ +A R F  +   + VSWN+I
Sbjct: 152 ALDAGKYIHGFGIKVG--GTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSI 209

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I     NG   E  D  ++M+ +  +E D  T++ L+  C    + +   S+HG      
Sbjct: 210 IAAQVTNGCAREGIDYFNKMRRL-GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG 268

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
            G  + +  +L+D Y+K   LS +  +F  +    D V+W +M++G            LF
Sbjct: 269 FGAKITIATALLDTYAKLGRLSASYGVFTEVG-FADRVAWTAMLAGYAAHGLGREAIKLF 327

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYIN 415
           + M     +    T   +L +C+    +  GKS  +      G        + ++ +   
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGR 387

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP-DSVTL 474
           CG L  A+ ++Q +    +   W  ++ AC  +G+ +   +  + +   +   P + + L
Sbjct: 388 CGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIML 447

Query: 475 VNVISA 480
            N+ SA
Sbjct: 448 SNMYSA 453



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 2/271 (0%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +  + SL+  Y       S+  LF    + + V+WN++I A V N C   G+ +F +M  
Sbjct: 172 VKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRR 231

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            GI  D  T+L ++ A   +   K    +H L    G  A  ++    ++ YAK G L++
Sbjct: 232 LGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSA 291

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           S   F+ +  AD V+W  +++G   +    + +  F  M   G + D+V+ +  ++A + 
Sbjct: 292 SYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSH 351

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSW 245
            G ++ GK    +  ++ Y   P V   + ++ +  +CG +  A      M  + +   W
Sbjct: 352 SGLVNEGKSYFNVMSEV-YGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVW 410

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
            A++    ++G  E   ++   +  M  ++P
Sbjct: 411 GALLGACRVHGNIELGKEVAEHLINMEPLDP 441


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 164/560 (29%), Positives = 284/560 (50%), Gaps = 67/560 (11%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+SL   +  L +   +H   +   L     ++  L+D +S    +  A  + +      
Sbjct: 2   LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPT 57

Query: 344 DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH 391
           D  SWNS+I              L+ +ML   ++ S  T   +L +C++  S+  G+ IH
Sbjct: 58  DF-SWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH 116

Query: 392 CWQLKLGFSNNTIGVNALMHMYINC-------------------------------GDLV 420
              L+LGF ++    N+L+ MY  C                               G + 
Sbjct: 117 THVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVE 176

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVIS 479
            A  L + +    +  CW  +I    + G F E +  F+ M        P++ T+V ++S
Sbjct: 177 KARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLS 236

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
           AC  L     G+ L      + + L+T +  ALI MY +C D++ A  +F+     NL +
Sbjct: 237 ACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPS 296

Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           WN +I+   Q      A++L+RH++    +PNEI++V++LSAC  LG L  G+++H ++ 
Sbjct: 297 WNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLG 356

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             G   N  +++AL+DMY+ C               K  A W++MI    YHG G +++ 
Sbjct: 357 RNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLA 416

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           +F +M  +G++P   + I +LSAC+HSGLV+EG   +++M +++ + P+ EH+ C+VD+L
Sbjct: 417 VFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLL 476

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G L+EAYE ++N+ I P   +WGA+LSAC  H + ++  +++E +   +  N+G+ I
Sbjct: 477 GRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCI 536

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LSN+Y + GRWKD   + +
Sbjct: 537 LLSNIYASSGRWKDVARVRR 556



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 231/508 (45%), Gaps = 49/508 (9%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           LP  T L+    ++   + +  +  +T +    +WN++I A   +      L  + +M+ 
Sbjct: 27  LPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLR 86

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
              +  + T   ++ A + +  + +G  +H   ++ G  +D  +CN  ++MY KC  L+S
Sbjct: 87  SSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDS 146

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM--------------GWSGE-- 170
           +   +  M   D VSWN+I+SG +     EK    F EM              G+  E  
Sbjct: 147 ARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGD 206

Query: 171 -------------QADNVSLSSAVAA---SACLGELSYGKVIHALGIKLGYEDSPYVSV- 213
                         AD V  ++A      SAC    +Y +V   L + +     P  ++ 
Sbjct: 207 FVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNY-EVGRFLSVFIDVNKIPLNTIL 265

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +LI MYS+CGD+E A R F G++CK++ SWNAII G    G  EEA DL   M+  +S
Sbjct: 266 VTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMK-AQS 324

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V+P+  T+V ++S CA    L  GR VH Y  R  L  ++++  +L+D Y+K   +  A 
Sbjct: 325 VKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDAC 384

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
           L+F   +   D+  WN+MI GL            F +M+    Q +  T + +L +CN  
Sbjct: 385 LIFVKTSE-KDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHS 443

Query: 382 ESLEFGK-SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +E G+        K G S        ++ +    G L  A+ L+Q +    D+  W  
Sbjct: 444 GLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGA 503

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ AC  + + + A K  +++   Q+ +
Sbjct: 504 LLSACRIHRNLELADKISETIMASQDPN 531



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 10/291 (3%)

Query: 7   LPTSTSLLTA----YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +P +T L+TA    YS     E +  +F     K++ +WNA+IT CV+   +   +  + 
Sbjct: 259 IPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYR 318

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M  + ++ +  TL+ ++SA   +  L+ GR VH    + G+  +  L    V+MYAKCG
Sbjct: 319 HMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCG 378

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            ++ +   F      D   WN ++ G  ++      L  F +M  +G Q ++V+    ++
Sbjct: 379 KIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLS 438

Query: 183 ASACLGELSYGKV-IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
           A    G +  G+V   ++  K G   SP +     ++ +  + G ++ A      M    
Sbjct: 439 ACNHSGLVEEGRVQFSSMADKHGL--SPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPP 496

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           D + W A++    ++   E A D + E  +M S +P+I   + L ++ A S
Sbjct: 497 DSIIWGALLSACRIHRNLELA-DKISE-TIMASQDPNIGFCILLSNIYASS 545


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 282/535 (52%), Gaps = 49/535 (9%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +++LI  C    LL++   +H   +   +     +++ ++D       L+ A L+FN + 
Sbjct: 36  LLSLIKQCKSKNLLKQ---IHAQMLINSIPKPNFLLSKIIDL----KDLAYASLVFNQLT 88

Query: 341 PMNDLVSWNSMISGL----------------FKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             N + ++N M+ GL                 K +    + F++  L     +C +   L
Sbjct: 89  KPN-IYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFI---ACGNVRGL 144

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             GK  HC   K G   +    ++L+ MY  CG++  A  +   +  + D   WN +I  
Sbjct: 145 VHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMG-DRDLVSWNSMISG 203

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
            ++ G  +EAI  F  M +++   PD +TLV+V+ ACG+L     G+ + G  L+  M +
Sbjct: 204 YSKMGFTKEAIGLFMEM-REEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEV 262

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---R 561
           ++ + +ALI MYG+C D+ SA  VF+S  N ++ TWN +I+ ++QN A   A+ LF   R
Sbjct: 263 NSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMR 322

Query: 562 HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
                P+ ++++ +LSAC+ +G L  GK +  H    G Q + +++SAL+DMY+ C    
Sbjct: 323 EAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLD 382

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSA 664
                      K+  +W++MISA  +HG+  EA+ LF  M   N  ++P   + I +LSA
Sbjct: 383 DAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSA 442

Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG 724
           C H+GLVDEG Q + +M   + + P+ EH+ C+VD+  R+G L EA++ IK +P +P   
Sbjct: 443 CVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEI 502

Query: 725 VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           V G++L AC    +  +G++V +L  ++E  N G Y+  S +Y  + RW D+ ++
Sbjct: 503 VLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKM 557



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 219/457 (47%), Gaps = 20/457 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMV 65
           +P    LL+   ++     +  +F +    ++  +N M+       +     +  + ++ 
Sbjct: 61  IPKPNFLLSKIIDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLK 120

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             G++ ++ T   +  A   +  L  G++ HCL  KAG+  D  + +  + MYA+CG++ 
Sbjct: 121 SLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMG 180

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   D VSWN+++SG     + ++ +  F EM   G + D ++L S + A  
Sbjct: 181 FARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACG 240

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
            LG+L  G+ +    ++   E + Y+   ++LI MY +CGD+ +A R F  M  KDVV+W
Sbjct: 241 DLGDLGLGRWVEGFVLEKKMEVNSYMG--SALIDMYGKCGDLISARRVFDSMPNKDVVTW 298

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           NAII G+A NG   EA  L + M+      PD  T++ ++S C+    L  G+ V  +A 
Sbjct: 299 NAIITGYAQNGASNEAIVLFNGMR-EAGPHPDRVTMIEVLSACSTIGALDLGKWVETHAS 357

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML 360
            + L +D+ + ++L+D Y+K  SL  A  +F ++ P  + VSWN+MIS L      +E L
Sbjct: 358 EKGLQHDVYVASALIDMYAKCGSLDDAVRVFESM-PHKNEVSWNAMISALAFHGQAQEAL 416

Query: 361 YLCSQFSFS---------TLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALM 410
            L  + S           T + +L +C     ++ G+ +     L  G        + ++
Sbjct: 417 SLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMV 476

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
            +    G L  A+ L++++    D      ++ AC +
Sbjct: 477 DLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQR 513


>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
 gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 182/607 (29%), Positives = 294/607 (48%), Gaps = 85/607 (14%)

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL----CADSLLLREGRSVHGYA 304
           +  FA +G+  ++F+    +QL  S       ++  IS+    C  S  L  G+ +HG+ 
Sbjct: 46  LKDFASHGQLSKSFEAFSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHI 105

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF---NAIAPMNDLVSWNSMISGLFKEMLY 361
           I   L  D  +++ L+ FYS    L +A  L    N   P     SWN +I+   K  LY
Sbjct: 106 ISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLFRP----CSWNILITSYVKHKLY 161

Query: 362 LCSQFSFS------------TLLAILPSCNSPESLEFG----KSIHCWQLKLGFSNNTIG 405
             +  ++             T  +IL +C   ++L+FG    KSI+ W        +   
Sbjct: 162 EAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVH--- 218

Query: 406 VNALMHMYINCGDLVAAFSL----LQR--ISHNSDTSC---------------------- 437
            NAL+ MY  CG++  A +L    L+R  +S NS  SC                      
Sbjct: 219 -NALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCL 277

Query: 438 ------WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
                 WNI+   C + G+F +A+K    M +      D V ++  + AC ++     GK
Sbjct: 278 EINVVTWNIIAGGCLRVGNFTQALKLLSQM-RNFGIHLDDVAMIIGLGACSHIGAIRLGK 336

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +HG  ++    + + VQNAL+TMY RC+DI+ A  +F    + +  TWN M+S  +   
Sbjct: 337 EIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLG 396

Query: 552 AEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVF-HLGFQENSFIS 607
               AL LFR L     EP+ ++  SIL  C ++  L+HG++ H ++  H  F+++  + 
Sbjct: 397 RVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLW 456

Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           +AL+DMY+                 K    ++S+I+ YG  G+G +A+ LF EM    I+
Sbjct: 457 NALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIK 516

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   ++I++LSACSHSGLV++    +  M   + + P  EH+ C+ D+ GR G L +A E
Sbjct: 517 PDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKE 576

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
            I  +P +P   +W  ++ AC  HG+  +G+  AE L ++ PE+ GYY+ ++NMY A G 
Sbjct: 577 IITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGS 636

Query: 773 WKDAVEI 779
           W    EI
Sbjct: 637 WSKLAEI 643



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 233/523 (44%), Gaps = 64/523 (12%)

Query: 78  IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           I++ + T+ + L  G+ +H   I +G++ DS L +  V  Y+    L  +       +  
Sbjct: 84  ILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLF 143

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
              SWN +++  + +   E  +L +++M   G + DN +  S + A      L +G  +H
Sbjct: 144 RPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVH 203

Query: 198 ALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
                +    +P+ + V N+LISMY +CG+++ A   F  M  +D VSWN++I  ++  G
Sbjct: 204 K---SINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRG 260

Query: 257 KFEEAFDLLHEMQ--------------------------------LMRSVEPDIATVVTL 284
            + EAF+L   MQ                                 MR+    +  V  +
Sbjct: 261 MWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMI 320

Query: 285 ISL--CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           I L  C+    +R G+ +HG+ IR        + N+L+  Y++   +  A +LF     +
Sbjct: 321 IGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFR----L 376

Query: 343 ND---LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
           ND    ++WNSM+SG            LF+E+L    +  + T  +ILP C     L+ G
Sbjct: 377 NDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHG 436

Query: 388 KSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
           +  HC+  K   F ++ +  NAL+ MY   G +  A  +   +S   D   +  +I    
Sbjct: 437 REFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLS-KKDEVTYTSLIAGYG 495

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
             G   +A++ F+ M + Q   PD +T++ V+SAC +  L  + + L    ++S+ GL  
Sbjct: 496 MQGEGGKAVRLFEEMKRFQ-IKPDHITMIAVLSACSHSGLVNQAELLFA-EMQSVHGLSP 553

Query: 507 RVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           R+++   +  ++GR   +  A  +     Y      W  +I A
Sbjct: 554 RLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGA 596



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 227/496 (45%), Gaps = 67/496 (13%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + L+  YS++ +   +  L   +      +WN +IT+ V+++     +  + +MV +G+R
Sbjct: 118 SKLVMFYSSLEFLPEAHTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVR 177

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLNSSEC 129
            D+ T   I+ A  +   LK G  VH  SI +     S    N  ++MY +CG+++++  
Sbjct: 178 PDNFTFPSILKACGETQNLKFGLEVH-KSINSWSTPWSLFVHNALISMYGRCGEVDTARN 236

Query: 130 TFSGMHCADTVSWNTIMS-----------------------------------GCLHNNY 154
            F  M   D VSWN+++S                                   GCL    
Sbjct: 237 LFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGN 296

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             + L    +M   G   D+V++   + A + +G +  GK IH   I+  +      +V 
Sbjct: 297 FTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIR--HYHHMLSTVQ 354

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+L++MY++C DI  A   F     K  ++WN+++ G    G+ EEA  L  E+ L+  V
Sbjct: 355 NALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFREL-LLFGV 413

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           EPD  T  +++ LCA    L+ GR  H Y  + R     LL+ N+L+D Y+++  +S+A+
Sbjct: 414 EPDYVTFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAK 473

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN-- 379
            +F +++   D V++ S+I+G            LF+EM     +    T++A+L +C+  
Sbjct: 474 RIFYSLSK-KDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHS 532

Query: 380 ---SPESLEFG--KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
              +   L F   +S+H      G S        +  ++   G L  A  ++ R+ +   
Sbjct: 533 GLVNQAELLFAEMQSVH------GLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPT 586

Query: 435 TSCWNIVIVACTQNGH 450
           ++ W  +I AC  +G+
Sbjct: 587 SAIWATLIGACCIHGN 602



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 15/162 (9%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R F  HL    +L+  Y+       +  +FY    KD VT+ ++I            +  
Sbjct: 447 RDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRL 506

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV-------VHCLSIKAGMIADSSLCNV 113
           F EM    I+ D  T++ ++SA +    + Q  +       VH LS +    A       
Sbjct: 507 FEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHYA------C 560

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVS-WNTIMSG-CLHNN 153
             +++ + G LN ++   + M    T + W T++   C+H N
Sbjct: 561 MADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGN 602


>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
 gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 265/514 (51%), Gaps = 36/514 (7%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  G  +H +A ++ +  D+ +   +M  Y++   +  A+ LF  I    DLV+W+++I+
Sbjct: 4   LGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKG-RDLVAWSAIIA 62

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
                        LF+ M     Q +   LL+ LP+C    SL+ GKS+HC  +K     
Sbjct: 63  AFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDL 122

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +     AL+ MY  CG    A +L  R+    D   WN +I    Q G    A++ F  +
Sbjct: 123 DISVGTALVSMYAKCGFFALALTLFNRMP-CKDVVTWNAMINGYAQIGEPFPALEMFHKL 181

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            Q    +P+S T+V ++ A   L    +G  +HG  +K     +  V+ ALI MY +C  
Sbjct: 182 -QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGS 240

Query: 522 IKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSIL 576
           +  A  +F    C   +  +WN MI+ +  +   + A   F  ++ E   PN ++IV++L
Sbjct: 241 LSGAEFLFHRTGCRK-DEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVL 299

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
            A   L  LR G  +H +V  +GFQ  + + + L+DMY+ C               K   
Sbjct: 300 PAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTV 359

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           +W+ M++ Y  HG+G  AIELF  M +S IR    S I++LSAC H+GL+ EG + +++M
Sbjct: 360 SWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSM 419

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
            +++ + P+ EH+ C+ D+LGR+G   E  + IK++P++P  GVWGA+L A + H + ++
Sbjct: 420 SKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQL 479

Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +     L KLE +N+ +Y +LSN Y   GRW D
Sbjct: 480 AEFALHHLDKLEHKNLTHYAALSNTYARSGRWAD 513



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 220/420 (52%), Gaps = 17/420 (4%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           M  L +G  +H  + + G+ +D ++    + MYA+CG++++++  F  +   D V+W+ I
Sbjct: 1   MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAI 60

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           ++  + + YP++ L  FR M   G QA+ V L S++ A A +  L  GK +H   +K   
Sbjct: 61  IAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANV 120

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           +    +SV  +L+SMY++CG    A   F  M CKDVV+WNA+I+G+A  G+   A ++ 
Sbjct: 121 DLD--ISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMF 178

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
           H++QL   + P+  T+V L+   A    L +G  +HG  I+     +  +  +L+D Y+K
Sbjct: 179 HKLQL-SELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAK 237

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLA 373
             SLS AE LF+      D VSWN MI+G             F +M     Q +  T++ 
Sbjct: 238 CGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVT 297

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +LP+     +L  G ++H + +++GF + T   N L+ MY  CG L  +  +   +  N 
Sbjct: 298 VLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMK-NK 356

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           DT  WN+++     +G    AI+ F  M Q      DS + +NV+SAC +  L  EG+ +
Sbjct: 357 DTVSWNVMLAGYAVHGRGSCAIELFSRM-QDSEIRLDSFSFINVLSACRHAGLIGEGRKI 415



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 187/355 (52%), Gaps = 5/355 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + +  +T ++T Y+     +++  LF E   +D+V W+A+I A V++      L  
Sbjct: 17  QGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSL 76

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M  EG++ +   LL  + A  +++ LK G+ +HC ++KA +  D S+    V+MYAK
Sbjct: 77  FRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAK 136

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG    +   F+ M C D V+WN +++G      P   L  F ++  S    ++ ++   
Sbjct: 137 CGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGL 196

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC- 239
           + A A L +L  G  IH   IK G+E   +V    +LI MY++CG +  AE  F    C 
Sbjct: 197 LPAFALLNDLDQGSCIHGKIIKCGFESECHVK--TALIDMYAKCGSLSGAEFLFHRTGCR 254

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD VSWN +I G+  +G   +AF    +M+L  +++P+I T+VT++   A    LR G +
Sbjct: 255 KDEVSWNVMIAGYMHSGHAIDAFSAFCQMKL-ENIQPNIVTIVTVLPAVAHLSALRAGMT 313

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +H Y IR        + N L+D Y+K   L  +E +F+ +    D VSWN M++G
Sbjct: 314 LHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKN-KDTVSWNVMLAG 367



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 1/196 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHF 60
           GF +     T+L+  Y+       +  LF+ T C KD V+WN MI   + +   +     
Sbjct: 220 GFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSA 279

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M  E I+ +  T++ ++ A+  ++ L+ G  +H   I+ G  + + + N  ++MYAK
Sbjct: 280 FCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAK 339

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L+ SE  F  M   DTVSWN +++G   +      +  F  M  S  + D+ S  + 
Sbjct: 340 CGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINV 399

Query: 181 VAASACLGELSYGKVI 196
           ++A    G +  G+ I
Sbjct: 400 LSACRHAGLIGEGRKI 415


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 274/533 (51%), Gaps = 47/533 (8%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK---- 331
           PD     +++  C     LR G SVHG  IR  +G+DL   N+LM+ YSK  SL +    
Sbjct: 8   PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67

Query: 332 ----AELLFNAIAPMNDLVSWNS--MISGLFKEMLYLCSQFSFSTLLAILPSCNS-PESL 384
               +++L     P       NS  +   L + +  +      + +  IL   N+  +  
Sbjct: 68  RFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVF 127

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           + GK+   +  K   S            Y+  G L   F ++ +     D   WN VI  
Sbjct: 128 DEGKTSDVYSKKEKES-----------YYL--GSLRKVFEMMPK----RDIVSWNTVISG 170

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             QNG  ++A+   + M    +  PDS TL +V+          +GK +HG A+++    
Sbjct: 171 NAQNGMHEDALMMVREMGNA-DLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDA 229

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
           D  + ++LI MY +C  +  +  VF      +  +WN +I+   QN      L+ F+ + 
Sbjct: 230 DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML 289

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-- 619
             + +PN +S  SI+ AC  L  L  GKQ+HG++    F  N FI+SAL+DMY+ C +  
Sbjct: 290 IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIR 349

Query: 620 -------------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                          +W++MI  Y  HG  ++AI LF  M   G++P   + +++L+ACS
Sbjct: 350 TARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 409

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
           H+GLVDE  +Y+N+M ++Y + P  EH+  + D+LGR G+L+EAYEFI ++ I+P   VW
Sbjct: 410 HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVW 469

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             +L+AC  H + ++ ++V++ LF ++P+N+G Y+ LSN+Y A GRWKDA ++
Sbjct: 470 STLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 522



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 178/381 (46%), Gaps = 32/381 (8%)

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L S    F  M   D VSWNT++SG   N   E  L+  REMG +  + D+ +LSS +  
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A    L  GK IH   I+ GY+   ++   +SLI MY++C  ++ + R F+ +   D +
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIG--SSLIDMYAKCTRVDDSCRVFYMLPQHDGI 263

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SWN+II G   NG F+E      +M L+  ++P+  +  +++  CA    L  G+ +HGY
Sbjct: 264 SWNSIIAGCVQNGMFDEGLKFFQQM-LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 322

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
            IR     ++ + ++L+D Y+K  ++  A  +F+ +  + D+VSW +MI G         
Sbjct: 323 IIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME-LYDMVSWTAMIMGYALHGHAYD 381

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
              LFK M     + ++   +A+L +C+       G     W+     + +   +  L H
Sbjct: 382 AISLFKRMEVEGVKPNYVAFMAVLTACSHA-----GLVDEAWKYFNSMTQDYRIIPGLEH 436

Query: 412 MYINCGDLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--T 462
            Y    DL+        A+  +  +      S W+ ++ AC  + + + A K  K +   
Sbjct: 437 -YAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTV 495

Query: 463 QQQNASPDSVTLVNVISACGN 483
             QN     V L N+ SA G 
Sbjct: 496 DPQNIGA-YVLLSNIYSAAGR 515



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 152/278 (54%), Gaps = 4/278 (1%)

Query: 21  SYFESSLALFYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLII 79
           SY+  SL   +E   K D+V+WN +I+   +N      L    EM    +R DS TL  +
Sbjct: 143 SYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSV 202

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +    +   L +G+ +H  +I+ G  AD  + +  ++MYAKC  ++ S   F  +   D 
Sbjct: 203 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDG 262

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           +SWN+I++GC+ N   ++ L +F++M  +  + ++VS SS + A A L  L  GK +H  
Sbjct: 263 ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGY 322

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            I+  ++ + +++  ++L+ MY++CG+I  A   F  M   D+VSW A+I G+AL+G   
Sbjct: 323 IIRSRFDGNVFIA--SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 380

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +A  L   M++   V+P+    + +++ C+ + L+ E 
Sbjct: 381 DAISLFKRMEV-EGVKPNYVAFMAVLTACSHAGLVDEA 417



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+ A +   +SL+  Y+  +  + S  +FY     D ++WN++I  CV+N     GL FF
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M+   I+ +  +   I+ A   +  L  G+ +H   I++    +  + +  V+MYAKC
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKC 345

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ ++   F  M   D VSW  ++ G   + +    +  F+ M   G + + V+  + +
Sbjct: 346 GNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVL 405

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +           HA     G  D  +    NS+   Y     +E             
Sbjct: 406 TACS-----------HA-----GLVDEAW-KYFNSMTQDYRIIPGLE------------- 435

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
              + A+ D     G+ EEA++ + +M     +EP  +   TL++ C
Sbjct: 436 --HYAAVADLLGRVGRLEEAYEFISDMH----IEPTGSVWSTLLAAC 476


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/534 (31%), Positives = 286/534 (53%), Gaps = 38/534 (7%)

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLMDFYSKSNSLSKAELLFNA 338
           + L+ + AD+  L+ GR++H +       Y    +  +NSL++ Y K + +S A  LF++
Sbjct: 23  IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82

Query: 339 IAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI-LPSCNSPESLE 385
           + P  ++VSW+++++G            LFK+M+   + F    ++A  + SC+S   +E
Sbjct: 83  M-PRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE 141

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            GK  H + LK G   +    NAL+ +Y  C D+ AA  +L  +  N D  C+N+V+   
Sbjct: 142 -GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGN-DIFCYNLVVNGL 199

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            Q+ H  EA+   K +   +    ++ T V +   C +L+    GK +H   LKS +  D
Sbjct: 200 LQHTHMAEAVDVLK-LIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCD 258

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
             + +++I MYG+C ++ S  T F+   + N+ +W  +I+A+ QN+    AL LF  +E 
Sbjct: 259 VYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEI 318

Query: 566 E---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY-------- 614
           +   PNE ++  + ++   L  L  G Q+H      G + N  + +AL+ MY        
Sbjct: 319 DCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILA 378

Query: 615 -----SN--CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                SN  C +   W+++I+ + +HG G EA+ +F +M  +G RP   + I ++ AC+H
Sbjct: 379 AQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAH 438

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
             LVDEG  Y+N++++++ + P  EH+ CIV +L RSG+L EA  F+++  I      W 
Sbjct: 439 LKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWR 498

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +L+AC  H     G+++AE L +LEP +VG YI LSNM+  + RW   VEI K
Sbjct: 499 TLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRK 552



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 219/426 (51%), Gaps = 26/426 (6%)

Query: 181 VAASACLGELSYGKVIHA-LGI-KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           VAA A    L +G+ IHA L I    Y DS  V+  NSLI++Y +C ++  A + F  M 
Sbjct: 28  VAADA--KNLKFGRTIHAHLTITNHNYRDSK-VNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            ++VVSW+A++ G+  NG   E F+L  +M +  ++ P+   + T IS C DS +  EG+
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSC-DSQMYVEGK 143

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA-ELLFNAIAPMNDLVSWNSMISGLFK 357
             HGYA++  L +   + N+L+  YSK + +  A ++L+    P ND+  +N +++GL +
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYT--VPGNDIFCYNLVVNGLLQ 201

Query: 358 --------EMLYLC----SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                   ++L L      +++ +T + I   C S + +  GK +H   LK     +   
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            ++++ MY  CG++++  +   R+   +  S W  +I A  QN  F+EA+  F  M +  
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVS-WTSIIAAYFQNEFFEEALNLFSKM-EID 319

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
              P+  T+  + ++   L     G  LH  A KS +  +  V NALI MY +  DI +A
Sbjct: 320 CIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAA 379

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQL 582
            +VF +   CN+ TWN +I+  S +     AL +F+ +      PN ++ + ++ AC  L
Sbjct: 380 QSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHL 439

Query: 583 GVLRHG 588
            ++  G
Sbjct: 440 KLVDEG 445



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 241/518 (46%), Gaps = 46/518 (8%)

Query: 89  LKQGRVVHC-LSIKAGMIADSSL--CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           LK GR +H  L+I      DS +   N  +N+Y KC +++ +   F  M   + VSW+ +
Sbjct: 35  LKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSAL 94

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS---AVAASACLGELSY-GKVIHALGI 201
           M+G + N  P +    F++M       DN+  +    A A S+C  ++   GK  H   +
Sbjct: 95  MAGYMQNGNPLEVFELFKKM----VVKDNIFPNEYVIATAISSCDSQMYVEGKQCHGYAL 150

Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
           K G E   YV   N+LI +YS+C D+ AA +  + +   D+  +N +++G   +    EA
Sbjct: 151 KSGLEFHQYVK--NALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEA 208

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
            D+L ++ +   +E + AT VT+  LCA    +  G+ VH   ++  +  D+ + +S++D
Sbjct: 209 VDVL-KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIID 267

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQFSFS------- 369
            Y K  ++      F+ +   N +VSW S+I+       F+E L L S+           
Sbjct: 268 MYGKCGNVLSGRTFFDRLQSRN-VVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEY 326

Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           T+  +  S     +L  G  +H    K G   N +  NAL+ MY   GD++AA S+    
Sbjct: 327 TMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVF--- 383

Query: 430 SHNSDTSC-----WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
              S+ +C     WN +I   + +G  +EA+  F+ M       P+ VT + VI AC +L
Sbjct: 384 ---SNMTCCNIITWNAIITGHSHHGLGKEALSMFQDM-MATGERPNYVTFIGVILACAHL 439

Query: 485 ELAFEGKSLHGLALKSLM---GLDTRVQNALITMYGRCRDIKSASTVFES-CYNCNLCTW 540
           +L  EG       +K      GL+      ++ +  R   +  A     S   N ++ +W
Sbjct: 440 KLVDEGFYYFNHLMKQFRIVPGLEH--YTCIVGLLSRSGRLDEAENFMRSHQINWDVVSW 497

Query: 541 NCMISAFSQNKAEVRALELFRH-LEFEPNEISIVSILS 577
             +++A   +K   +  ++  + L+ EP ++    +LS
Sbjct: 498 RTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLS 535



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 176/376 (46%), Gaps = 4/376 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H     +L+  YS  S   +++ + Y     D+  +N ++   +++  +   +   
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL 212

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             ++ EGI +++ T + I      +  +  G+ VH   +K+ +  D  + +  ++MY KC
Sbjct: 213 KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKC 272

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ S    F  +   + VSW +I++    N + E+ L  F +M       +  +++   
Sbjct: 273 GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLF 332

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ++A L  L  G  +HA   K G + +  V V N+LI MY + GDI AA+  F  MTC +
Sbjct: 333 NSAAGLSALCLGDQLHARAEKSGLKGN--VMVGNALIIMYFKSGDILAAQSVFSNMTCCN 390

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++WNAII G + +G  +EA  +  +M +     P+  T + +I  CA   L+ EG    
Sbjct: 391 IITWNAIITGHSHHGLGKEALSMFQDM-MATGERPNYVTFIGVILACAHLKLVDEGFYYF 449

Query: 302 GYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
            + +++  +   L     ++   S+S  L +AE    +     D+VSW ++++  +    
Sbjct: 450 NHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKH 509

Query: 361 YLCSQFSFSTLLAILP 376
           Y   +     LL + P
Sbjct: 510 YDKGRKIAEYLLQLEP 525



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/469 (20%), Positives = 217/469 (46%), Gaps = 25/469 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y        +  LF     ++VV+W+A++   ++N   +     F +MV +   F
Sbjct: 62  SLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIF 121

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            +  ++    +        +G+  H  ++K+G+     + N  + +Y+KC D+ ++    
Sbjct: 122 PNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQIL 181

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D   +N +++G L + +  + +   + +   G + +N +  +     A L +++
Sbjct: 182 YTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDIT 241

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK +HA  +K   +   Y+   +S+I MY +CG++ +    F  +  ++VVSW +II  
Sbjct: 242 LGKQVHAQMLKSDIDCDVYIG--SSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAA 299

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N  FEEA +L  +M++   + P+  T+  L +  A    L  G  +H  A +  L  
Sbjct: 300 YFQNEFFEEALNLFSKMEI-DCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKG 358

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
           ++++ N+L+  Y KS  +  A+ +F+ +   N +++WN++I+G            +F++M
Sbjct: 359 NVMVGNALIIMYFKSGDILAAQSVFSNMTCCN-IITWNAIITGHSHHGLGKEALSMFQDM 417

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +    + ++ T + ++ +C   + ++     F   +  +++  G  + T  V  L     
Sbjct: 418 MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLS---- 473

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             G L  A + ++    N D   W  ++ AC  + H+ +  K  + + Q
Sbjct: 474 RSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQ 522



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 143/301 (47%), Gaps = 11/301 (3%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           +S++  Y       S    F    +++VV+W ++I A  +N      L+ F +M  + I 
Sbjct: 263 SSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIP 322

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T+ ++ ++   ++ L  G  +H  + K+G+  +  + N  + MY K GD+ +++  
Sbjct: 323 PNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSV 382

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           FS M C + ++WN I++G  H+   ++ L  F++M  +GE+ + V+    + A A L  +
Sbjct: 383 FSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLV 442

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
             G       +K  +   P +     ++ + S+ G ++ AE          DVVSW  ++
Sbjct: 443 DEGFYYFNHLMK-QFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           +   ++  +++   +    + +  +EP D+ T + L ++ A     R  R  H   IR+L
Sbjct: 502 NACYVHKHYDKGRKI---AEYLLQLEPRDVGTYILLSNMHA-----RVRRWDHVVEIRKL 553

Query: 309 L 309
           +
Sbjct: 554 M 554


>gi|302754104|ref|XP_002960476.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
 gi|300171415|gb|EFJ38015.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
          Length = 672

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 190/682 (27%), Positives = 333/682 (48%), Gaps = 44/682 (6%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L+QG+ +H    K G   ++ L N+ V+MY KCG L  +E  F  +   +  +W   M+ 
Sbjct: 1   LEQGKTIHEQMSKDGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTA 60

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N  P + +  F+ M   G + D V+ ++AV A + LG+L  G+ +H+      ++  
Sbjct: 61  FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSD 120

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + V  SLI+MY++ G+   AE  F  +  K+ V++ A+I  ++      EA  L   M
Sbjct: 121 AVLRV--SLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAM 178

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   V PD   +++ +  CA      +GR++H          D  + ++L+  Y +   
Sbjct: 179 HL-EGVAPDKVAMLSALGACASE---PDGRAIHACITCCGSDGDDTVASALVSMYGRFQM 234

Query: 329 LSKAE-LLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAIL 375
           L  A+ + F+   P + +  WNSMIS     G  +E L L  +           T++ IL
Sbjct: 235 LESAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEIL 294

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS-D 434
             C+    L+  + IH  QL+     +T  V++L+++Y  C  L  A ++ +  +  + D
Sbjct: 295 GVCSVLRKLDKARMIHA-QLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARD 353

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN +I A  + G    A+K F ++       P  VT V V+ A  +L     G SLH
Sbjct: 354 CVAWNTMIAAYAECGDPGMALKLF-TLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLH 412

Query: 495 GLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
              ++S  GLD    V N+L+  YG C  + SA+ VF S    +  +WN ++  ++Q+  
Sbjct: 413 H-RIRSC-GLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGC 470

Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL +F  +E E    N I++ ++++ACT  G    GK IH  V  +G + +S + SA
Sbjct: 471 CDTALAVFHGMELEGVRANVITLTNVVTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSA 530

Query: 610 LLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+ MY                + K+  +W+++++ +   G+  E ++L   M   G+   
Sbjct: 531 LVAMYGKFGMLDRAVSCFNDISAKNTVSWNALMTGFAQQGQSVETVQLSRAMQLQGMESD 590

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
            ++ + +L ACSH GLV+E L  ++N++E+  V    EH+ C++D+L R+G L  A +  
Sbjct: 591 GATYLVVLFACSHGGLVEEALSCFSNLVEDGSVSVNDEHYGCLIDLLARAGWLDRAEDLF 650

Query: 715 KNLPIQPKPGVWGAMLSACSHH 736
           +++P +P    W +++ AC  H
Sbjct: 651 RSMPFEPDSTSWMSLVGACKLH 672



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 275/593 (46%), Gaps = 31/593 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y        + A F+    +++ TW   +TA  +N      +H F  M  +G+  D
Sbjct: 26  LVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELD 85

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                  V A + +  L  GR +H     +   +D+ L    +NMYAK G+   +E  F 
Sbjct: 86  RVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEDLFQ 145

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   + V++  +++         + L  +R M   G   D V++ SA+   AC  E   
Sbjct: 146 RLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHLEGVAPDKVAMLSALG--ACASEPD- 202

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTCKDVVSWNAIID 250
           G+ IHA     G +     +V ++L+SMY +   +E+A+  F+   +    V  WN++I 
Sbjct: 203 GRAIHACITCCGSDGDD--TVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMIS 260

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  +G   EA +L  +M+L   V PD+ T+V ++ +C+    L + R +H   +R  + 
Sbjct: 261 AYVQSGHHREALELFEKMEL-EGVAPDVVTIVEILGVCSVLRKLDKARMIHAQ-LRARVD 318

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG------------LFK 357
            D  +++SL++ Y +  SL  A  +F   A    D V+WN+MI+             LF 
Sbjct: 319 ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLFT 378

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
            M     + +  T +A+L + +S  +L  G S+H      G        N+LM  Y +CG
Sbjct: 379 LMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCG 438

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            L +A ++   +    + S WN ++   TQ+G    A+  F  M + +    + +TL NV
Sbjct: 439 RLSSATAVFHSLERRDEVS-WNTIMGLYTQHGCCDTALAVFHGM-ELEGVRANVITLTNV 496

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLD--TRVQNALITMYGRCRDIKSASTVFESCYNC 535
           ++AC     A  GKS+H   L   MGL+  + V +AL+ MYG+   +  A + F      
Sbjct: 497 VTACTVTGDAAIGKSIHARVLS--MGLEHHSAVGSALVAMYGKFGMLDRAVSCFNDISAK 554

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           N  +WN +++ F+Q    V  ++L R ++    E +  + + +L AC+  G++
Sbjct: 555 NTVSWNALMTGFAQQGQSVETVQLSRAMQLQGMESDGATYLVVLFACSHGGLV 607



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 14/348 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           SLL  Y      E ++ +F E     +D V WN MI A  E     M L  F  M   G+
Sbjct: 326 SLLNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLFTLMDLHGV 385

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
                T + ++ A + +  L +G  +H      G+     + N  +  Y  CG L+S+  
Sbjct: 386 EPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCGRLSSATA 445

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +   D VSWNTIM     +   +  L  F  M   G +A+ ++L++ V A    G+
Sbjct: 446 VFHSLERRDEVSWNTIMGLYTQHGCCDTALAVFHGMELEGVRANVITLTNVVTACTVTGD 505

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
            + GK IHA  + +G E   + +V ++L++MY + G ++ A   F  ++ K+ VSWNA++
Sbjct: 506 AAIGKSIHARVLSMGLEH--HSAVGSALVAMYGKFGMLDRAVSCFNDISAKNTVSWNALM 563

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GFA  G+  E   L   MQL + +E D AT + ++  C+   L+ E  S        L+
Sbjct: 564 TGFAQQGQSVETVQLSRAMQL-QGMESDGATYLVVLFACSHGGLVEEALSC----FSNLV 618

Query: 310 GYDLLMMNS-----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
               + +N      L+D  +++  L +AE LF ++    D  SW S++
Sbjct: 619 EDGSVSVNDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLV 666



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 13/253 (5%)

Query: 4   LAHLP-TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           L  LP  S SL+  Y +     S+ A+F+    +D V+WN ++    ++ C    L  F 
Sbjct: 420 LDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALAVFH 479

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M  EG+R +  TL  +V+A T       G+ +H   +  G+   S++ +  V MY K G
Sbjct: 480 GMELEGVRANVITLTNVVTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMYGKFG 539

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            L+ +   F+ +   +TVSWN +M+G        + +   R M   G ++D  +    V 
Sbjct: 540 MLDRAVSCFNDISAKNTVSWNALMTGFAQQGQSVETVQLSRAMQLQGMESDGATY--LVV 597

Query: 183 ASACLGELSYGKVI-HALGIKLGYEDSPYVSVTNS----LISMYSQCGDIEAAERAFWGM 237
             AC    S+G ++  AL       +   VSV +     LI + ++ G ++ AE  F  M
Sbjct: 598 LFAC----SHGGLVEEALSCFSNLVEDGSVSVNDEHYGCLIDLLARAGWLDRAEDLFRSM 653

Query: 238 TCK-DVVSWNAII 249
             + D  SW +++
Sbjct: 654 PFEPDSTSWMSLV 666



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H    ++L+  Y      + +++ F +   K+ V+WNA++T   +    V  +   
Sbjct: 520 GLEHHSAVGSALVAMYGKFGMLDRAVSCFNDISAKNTVSWNALMTGFAQQGQSVETVQLS 579

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC------NVFV 115
             M  +G+  D  T L+++ A     C   G V   LS  + ++ D S+          +
Sbjct: 580 RAMQLQGMESDGATYLVVLFA-----CSHGGLVEEALSCFSNLVEDGSVSVNDEHYGCLI 634

Query: 116 NMYAKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           ++ A+ G L+ +E  F  M    D+ SW +++  C
Sbjct: 635 DLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGAC 669


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 189/679 (27%), Positives = 331/679 (48%), Gaps = 38/679 (5%)

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
           M   D VSW  I+S  + +   E+ L  F+EM  SG   +  + SS + A + LGE S G
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K IH   IK G+E +  +   + LI +YS+ G IE A R F  +   DVVSW  +I    
Sbjct: 61  KCIHGCVIKHGFESNQILG--SVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLV 118

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
             GK+ +A  +  +M +   V P+  T V +++  A  L L+ G+ VH + I   +  +L
Sbjct: 119 QAGKWSQALRIYIDM-IKAGVYPNEFTFVKVLA-AAGFLGLKHGKVVHAHLIVFGVELNL 176

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS---- 369
           ++  +L+  YSK   +  A +  + + P +D   W +++SGL + +    +  +F     
Sbjct: 177 VVKTALVHMYSKCQRMDDA-VRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEA 235

Query: 370 --------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                   T L+IL +C+   SL+ G+ IH   +  G  ++    NAL+ MY+ C   V 
Sbjct: 236 SGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVE 295

Query: 422 -AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
               + + I  + D   W  +I   +++G  Q +  ++  MT      P+SVTL  ++ +
Sbjct: 296 DGLRVFEGIE-SPDVISWTSLIAGLSEHGFHQGSFDSYMEMTAS-GLQPNSVTLSIILRS 353

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C   + A +   LHG  +K+    D  V NAL+  Y     +  A  +  +    +  T+
Sbjct: 354 CRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTY 413

Query: 541 NCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             + +  +Q      AL +  H+   + + +  S+   LSA   L  +  G Q+H +   
Sbjct: 414 TGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVK 473

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G   +  +S+ L+  Y  C                   +W+ +IS    +G    A+  
Sbjct: 474 SGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSA 533

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M  +G++P   + + +L  C+H GLVD GL+Y+N+M E + + P+ +H+VC+ D+LG
Sbjct: 534 FDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLG 593

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+L+EA E ++ +PI+P   ++  +L+AC  H    +G+ +A    KL+P +  + + 
Sbjct: 594 RAGRLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLM 653

Query: 763 LSNMYVALGRWKDAVEIGK 781
           L+N+Y + GR   A  I +
Sbjct: 654 LANLYDSSGRPDLAATIRR 672



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 169/663 (25%), Positives = 296/663 (44%), Gaps = 55/663 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++DVV+W  +++A V++      L  F EM+  G   +  T   ++ A + +     G+ 
Sbjct: 3   SRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDGKC 62

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   IK G  ++  L +V +++Y+K G +  +   FS +   D VSW T++S  +    
Sbjct: 63  IHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGK 122

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             + L  + +M  +G   +  +    +AA+  LG L +GKV+HA  I  G E +  + V 
Sbjct: 123 WSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHAHLIVFGVELN--LVVK 179

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            +L+ MYS+C  ++ A R        D   W AI+ G A N K  EA     EM+    +
Sbjct: 180 TALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEME-ASGI 238

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAE 333
             +  T +++++ C+  L L  GR +H   I   L  D+ + N+L+D Y K S+ +    
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298

Query: 334 LLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F  I    D++SW S+I+GL            + EM     Q +  TL  IL SC + 
Sbjct: 299 RVFEGIES-PDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAA 357

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           +S      +H   +K    ++    NAL+  Y     +  A+ L++ +S   D   +  +
Sbjct: 358 KSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQR-DALTYTGL 416

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
                Q GH + A+     M    +   D  ++   +SA   L     G  LH  ++KS 
Sbjct: 417 ATRLNQMGHHEMALHVINHMF-NDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSG 475

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS---AFSQNKAEVRALE 558
           +G    V N L++ YG+C   + A   F      ++ +WN +IS   ++    + + A +
Sbjct: 476 LGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFD 535

Query: 559 LFRHLEFEPNEISIVSILSACTQLGVLRHG-------KQIHGHVFHLGFQENSFISSALL 611
             R    +P+ ++ + +L  CT  G++  G       K++HG    +  Q + ++   L 
Sbjct: 536 DMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHG----IEPQLDHYV--CLF 589

Query: 612 DMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLV 671
           D+                 G  G+  EA+E+   M    IRP  S   +LL+AC    +V
Sbjct: 590 DL----------------LGRAGRLEEAMEILETMP---IRPNASIYKTLLAACKVHRIV 630

Query: 672 DEG 674
             G
Sbjct: 631 PLG 633



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 250/552 (45%), Gaps = 37/552 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++    + L+  YS     E +  LF    N DVV+W  MI++ V+       L  +
Sbjct: 71  GFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQAGKWSQALRIY 130

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M++ G+  +  T + +++A   +  LK G+VVH   I  G+  +  +    V+MY+KC
Sbjct: 131 IDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHAHLIVFGVELNLVVKTALVHMYSKC 189

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++ +         +D   W  I+SG   N    + ++ F+EM  SG  ++N +  S +
Sbjct: 190 QRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGILSNNFTYLSIL 249

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG-DIEAAERAFWGMTCK 240
            A + +  L  G+ IHA  I  G ED   + V N+L+ MY +C  ++E   R F G+   
Sbjct: 250 NACSLILSLDLGRQIHARVIMAGLEDD--IPVGNALVDMYMKCSHEVEDGLRVFEGIESP 307

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DV+SW ++I G + +G  + +FD   EM     ++P+  T+  ++  C  +    +   +
Sbjct: 308 DVISWTSLIAGLSEHGFHQGSFDSYMEMT-ASGLQPNSVTLSIILRSCRAAKSASQLLKL 366

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA-----------ELLFNAIAPMNDLVSWN 349
           HG+ I+    +D+ + N+L+D Y+ +  +  A            L +  +A   + +  +
Sbjct: 367 HGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHH 426

Query: 350 SMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            M   +   M     +    ++   L +     S+E G  +H + +K G  ++    N L
Sbjct: 427 EMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGL 486

Query: 410 MHMYINCG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           +  Y  CG   D   AF+ ++      D   WN +I      GH   A+  F  M +   
Sbjct: 487 VSFYGKCGLTRDAERAFAEIRE----PDIVSWNGLISVLASYGHISSALSAFDDM-RLTG 541

Query: 467 ASPDSVTLVNVI---SACGNLELAFE----GKSLHGLALKSLMGLDTRVQNALITMYGRC 519
             PDSVT + V+   + CG +++  E     K +HG+  +    LD  V   L  + GR 
Sbjct: 542 VKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQ----LDHYV--CLFDLLGRA 595

Query: 520 RDIKSASTVFES 531
             ++ A  + E+
Sbjct: 596 GRLEEAMEILET 607



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 197/469 (42%), Gaps = 40/469 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   +L   T+L+  YS     + ++ +   T   D   W A+++   +N  +   +  F
Sbjct: 171 GVELNLVVKTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAF 230

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   GI  ++ T L I++A + +  L  GR +H   I AG+  D  + N  V+MY KC
Sbjct: 231 QEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKC 290

Query: 122 G-DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
             ++      F G+   D +SW ++++G   + + +     + EM  SG Q ++V+LS  
Sbjct: 291 SHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLS-- 348

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +C    S  +++   G  +       ++V+N+L+  Y+    ++ A      M+ +
Sbjct: 349 IILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQR 408

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D +++  +       G  E A  +++ M     ++ D  ++   +S  A    +  G  +
Sbjct: 409 DALTYTGLATRLNQMGHHEMALHVINHM-FNDDIKMDGYSMAGFLSASAGLNSVETGMQL 467

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H Y+++  LG  + + N L+ FY K      AE  F  I    D+VSWN +IS L     
Sbjct: 468 HSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIRE-PDIVSWNGLISVLASYGH 526

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS-----NNT 403
                  F +M     +    T L +L +C            HC  + +G          
Sbjct: 527 ISSALSAFDDMRLTGVKPDSVTFLLVLFTCT-----------HCGLVDMGLEYFNSMKEM 575

Query: 404 IGVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G+   +  Y+         G L  A  +L+ +    + S +  ++ AC
Sbjct: 576 HGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAAC 624


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 171/537 (31%), Positives = 283/537 (52%), Gaps = 36/537 (6%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKA 332
           V PD  T+  L+  CA    L  GR++H  AIR    Y D  +  +L+  Y+K   +  +
Sbjct: 95  VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGS 154

Query: 333 ELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQF--------SFSTLLAILPSCN 379
              +NA +   D+V   SM++G     +  E L   S+         S  TL++++ +  
Sbjct: 155 INAYNAFSE-PDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAA 213

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
             + +  G++ H + ++  F  + + VNA++  Y+  G + AA  L + ++   D   W+
Sbjct: 214 QLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMT-EKDVVTWS 272

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
            ++    Q+G   EA+  +K M +     P++VT+V+V+ AC       EG+ +H +A+K
Sbjct: 273 CMVTGYVQSGDICEALTAYKKMVEA-GIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVK 331

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
               L+  V  AL+ MY +C   + A  +F      +   W  +IS F+QN     ++ +
Sbjct: 332 IGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRV 391

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F+ + F    P+ +++V +L+AC++ GV+R    +HG++   GF +  F+++AL+D+YS 
Sbjct: 392 FKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSK 451

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           C               K    WSSMIS YG HG G +A+ELF  M  S ++P   + +S+
Sbjct: 452 CGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSV 511

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHSGLV EG + + +M + Y V P   HH  +VD+LGR+G+LQEA + +     + 
Sbjct: 512 LSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RA 570

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
               W A+L+AC  H DT+M + VA  L KL+P++ GYY  L+N+Y     W  A E
Sbjct: 571 DAHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKE 627



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/512 (26%), Positives = 250/512 (48%), Gaps = 42/512 (8%)

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIE 228
           + D  +LS  + A A L  L++G+ +HAL I+    Y D+    V  +L+ MY++C  + 
Sbjct: 96  RPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDA---FVAAALVHMYAKCRGMV 152

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            +  A+   +  D+V   +++ G+  N    EA +      + +   P   T+V++IS  
Sbjct: 153 GSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAA 212

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           A    +  G++ H + IR    YDL+++N+++ FY +  ++  A  LF  +    D+V+W
Sbjct: 213 AQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTE-KDVVTW 271

Query: 349 NSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK 396
           + M++G             +K+M+    + +  T+++++ +C+    +E G+ +H   +K
Sbjct: 272 SCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVK 331

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           +G         AL+ MY+ C     A  L  R+S   D   W +VI   TQNG   E+++
Sbjct: 332 IGCELEMTVATALVDMYMKCSCHEEAMQLFCRMS-KKDAVAWAVVISGFTQNGLPDESMR 390

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            FK M       PD+VT+V V++AC    +  +   LHG  + +       V  AL+ +Y
Sbjct: 391 VFKCML-FGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLY 449

Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIV 573
            +C ++  A  VFES    ++  W+ MIS +  +    +A+ELF+ +     +PN ++ V
Sbjct: 450 SKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFV 509

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYH 633
           S+LSAC+  G+++ GK+I                 ++  +Y    +    S+M+   G  
Sbjct: 510 SVLSACSHSGLVQEGKRIF---------------ESMTQVYGVVPNAVHHSAMVDLLGRA 554

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           G+  EA +L H    +G R    +  +LL+AC
Sbjct: 555 GELQEAAKLLH---GNG-RADAHTWCALLAAC 582



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 261/529 (49%), Gaps = 30/529 (5%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSS 127
           +R D+ TL +++ A   +  L  GR +H L+I++     D+ +    V+MYAKC  +  S
Sbjct: 95  VRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGS 154

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASAC 186
              ++     D V   ++++G   N    + L +F R +   G     V+L S ++A+A 
Sbjct: 155 INAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQ 214

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L ++  G+  HA  I+  +E    + + N+++  Y + G ++AA R F GMT KDVV+W+
Sbjct: 215 LKDVLNGQACHAFVIRNNFEYD--LVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWS 272

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            ++ G+  +G   EA     +M +   ++P+  TVV+++  C+ +  + EGR VH  A++
Sbjct: 273 CMVTGYVQSGDICEALTAYKKM-VEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVK 331

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                ++ +  +L+D Y K +   +A  LF  ++   D V+W  +ISG            
Sbjct: 332 IGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSK-KDAVAWAVVISGFTQNGLPDESMR 390

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           +FK ML+        T++ +L +C+    +     +H + +  GF +      AL+ +Y 
Sbjct: 391 VFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYS 450

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG+L  A  + +  +   D   W+ +I     +G  Q+A++ F+ M    +  P+S+T 
Sbjct: 451 KCGNLGCAVRVFES-AMEKDVVLWSSMISGYGVHGLGQQAVELFQMMV-ASSVKPNSLTF 508

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKSASTVF 529
           V+V+SAC +  L  EGK +     +S+  +   V N     A++ + GR  +++ A+ + 
Sbjct: 509 VSVLSACSHSGLVQEGKRI----FESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLL 564

Query: 530 ESCYNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                 +  TW  +++A  + +  E+  +   + L+ +P+     ++L+
Sbjct: 565 HGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLN 613



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 221/459 (48%), Gaps = 34/459 (7%)

Query: 15  TAYSNVSYFESSLALFYETCN--------------KDVVTWNAMITACVENRCVVMGLHF 60
           TAY++ ++  ++L   Y  C                D+V   +M+T   +NR     L F
Sbjct: 130 TAYTD-AFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEF 188

Query: 61  FGE-MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F   +V +G      TL+ ++SA  Q+  +  G+  H   I+     D  L N  +  Y 
Sbjct: 189 FSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYM 248

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           + G + ++   F GM   D V+W+ +++G + +    + L  +++M  +G + + V++ S
Sbjct: 249 RIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVS 308

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            V A +   ++  G+ +H + +K+G E    ++V  +L+ MY +C   E A + F  M+ 
Sbjct: 309 VVQACSLAPDIEEGRRVHDIAVKIGCELE--MTVATALVDMYMKCSCHEEAMQLFCRMSK 366

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD V+W  +I GF  NG  +E+  +   M L     PD  T+V +++ C++S ++R+   
Sbjct: 367 KDAVAWAVVISGFTQNGLPDESMRVFKCM-LFGGPFPDAVTMVKVLAACSESGVMRQAFC 425

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HGY +       + +  +L+D YSK  +L  A  +F + A   D+V W+SMISG     
Sbjct: 426 LHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFES-AMEKDVVLWSSMISGYGVHG 484

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGV 406
                  LF+ M+    + +  T +++L +C+    ++ GK I     ++ G   N +  
Sbjct: 485 LGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHH 544

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
           +A++ +    G+L  A  LL   +  +D   W  ++ AC
Sbjct: 545 SAMVDLLGRAGELQEAAKLLHG-NGRADAHTWCALLAAC 582



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 160/289 (55%), Gaps = 3/289 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L  Y  +   +++  LF     KDVVTW+ M+T  V++  +   L  + +MVE GI+ 
Sbjct: 242 AILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKP 301

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           ++ T++ +V A +    +++GR VH +++K G   + ++    V+MY KC     +   F
Sbjct: 302 NAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLF 361

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D V+W  ++SG   N  P++ +  F+ M + G   D V++   +AA +  G + 
Sbjct: 362 CRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMR 421

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
               +H   +  G+ D  +V+   +L+ +YS+CG++  A R F     KDVV W+++I G
Sbjct: 422 QAFCLHGYLVITGFCDKIFVAA--ALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISG 479

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           + ++G  ++A +L  +M +  SV+P+  T V+++S C+ S L++EG+ +
Sbjct: 480 YGVHGLGQQAVELF-QMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRI 527



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/243 (20%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           +  +T+L+  Y   S  E ++ LF     KD V W  +I+   +N      +  F  M+ 
Sbjct: 338 MTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLF 397

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G   D+ T++ +++A ++   ++Q   +H   +  G      +    V++Y+KCG+L  
Sbjct: 398 GGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGC 457

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F      D V W++++SG   +   ++ +  F+ M  S  + ++++  S ++A + 
Sbjct: 458 AVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSH 517

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G +  GK I     ++ Y   P     ++++ +  + G+++ A +   G    D  +W 
Sbjct: 518 SGLVQEGKRIFESMTQV-YGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWC 576

Query: 247 AII 249
           A++
Sbjct: 577 ALL 579



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 51/290 (17%)

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHG-HVFHLG 599
           N ++ A  + +    AL L   L   P+  ++  +L AC  L  L HG+ +H   +    
Sbjct: 71  NALLRAHVRARQWCDALLLIPCLRVRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCT 130

Query: 600 FQENSFISSALLDMYSNCKS-----NA--AWS--------SMISAYGYHGKGWEAIELF- 643
              ++F+++AL+ MY+ C+      NA  A+S        SM++ Y  +    EA+E F 
Sbjct: 131 AYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFS 190

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE---EYDV------------- 687
             +   G  P+  +++S++SA +    V  G   +  ++    EYD+             
Sbjct: 191 RHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRI 250

Query: 688 ----------RPETEHHV----CIVDMLGRSGKLQE---AYEFIKNLPIQPKPGVWGAML 730
                        TE  V    C+V    +SG + E   AY+ +    I+P      +++
Sbjct: 251 GAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVV 310

Query: 731 SACSHHGDTKMGKQVAELLFKLEPE-NVGYYISLSNMYVALGRWKDAVEI 779
            ACS   D + G++V ++  K+  E  +    +L +MY+     ++A+++
Sbjct: 311 QACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQL 360



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 1/149 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +  + +L+  YS       ++ +F     KDVV W++MI+    +      +  F
Sbjct: 434 GFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELF 493

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MV   ++ +S T + ++SA +    +++G R+   ++   G++ ++   +  V++  +
Sbjct: 494 QMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGR 553

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGC 149
            G+L  +     G   AD  +W  +++ C
Sbjct: 554 AGELQEAAKLLHGNGRADAHTWCALLAAC 582


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 319/627 (50%), Gaps = 44/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV--VSWNA 247
           L  G++IH   +K     S    + N L  +Y+ C ++E A   F  +    +  ++W+ 
Sbjct: 15  LILGQIIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +  NG  E+A DL ++M L   V P   T   ++  CA    + +G+ +H +    
Sbjct: 74  MIRAYVSNGFAEKALDLYYKM-LNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCS 132

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D+ +  +L+DFY+K   L  A  +F+ + P  D+V+WN+MISG            L
Sbjct: 133 NFAADMYVCTALVDFYAKCGELDMAIKVFDEM-PKRDIVAWNAMISGFSLHCCLTDVIGL 191

Query: 356 FKEMLYL-CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F +M    C   + ST++ + P+     +L  GK++H +  ++GFSN+ +    ++ +Y 
Sbjct: 192 FLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---ASPDS 471
               ++ A  +       ++ + W+ +I    +N   +EA + F  M    +    +P +
Sbjct: 252 KSKCIIYARRVFDSDFKKNEVT-WSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVA 310

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           + L+  +  C        G+ +H  A+K+   LD  V N +I+ Y +   +  A   F  
Sbjct: 311 IGLI--LMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTE 368

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
               ++ ++N +IS   +N     +  LF  ++     P+  +++ IL+AC+ L  L HG
Sbjct: 369 IGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHG 428

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
              HG+    G+  N+ I +AL+DMY+ C               +   +W++M+  +G H
Sbjct: 429 SSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIH 488

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETE 692
           G G EA+ LF+ M ++G+ P + +++++LSACSHSGLVDEG Q +N+M   +++V P  +
Sbjct: 489 GLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLD 548

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+ D+L R+G L EAY+F+  +P +P   V G +LSAC  + + ++G +V++ +  L
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSL 608

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
             E     + LSN Y A  RW+DA +I
Sbjct: 609 -GETTESLVLLSNTYSAAERWEDAAKI 634



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 161/597 (26%), Positives = 290/597 (48%), Gaps = 48/597 (8%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNM---YAKCGDLNSSECTFSGMHCA--DTVSWNTIM 146
           G+++H   +K  +   SS   V VN+   YA C ++  +   F  +     + ++W+ ++
Sbjct: 18  GQIIHQHLLKRSLTLSSS--TVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMI 75

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
              + N + EK L  + +M  SG +    +    + A A L  +  GK+IH+      + 
Sbjct: 76  RAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFA 135

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              YV    +L+  Y++CG+++ A + F  M  +D+V+WNA+I GF+L+    +   L  
Sbjct: 136 ADMYV--CTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFL 193

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +M+    + P+++T+V +      +  LREG++VHGY  R     DL++   ++D Y+KS
Sbjct: 194 DMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA- 373
             +  A  +F++    N+ V+W++MI G            +F +ML + +  +  T +A 
Sbjct: 254 KCIIYARRVFDSDFKKNE-VTWSAMIGGYVENEMIKEAGEVFLQML-VNADMAMVTPVAI 311

Query: 374 --ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
             IL  C     L  G+ +HC+ +K GF  +    N ++  Y   G L  AF     I  
Sbjct: 312 GLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGL 371

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             D   +N +I  C +N   +E+ + F  M +     PD  TL+ +++AC NL     G 
Sbjct: 372 K-DIVSYNSLISGCVENCRAEESFRLFHQM-KSSGIRPDITTLLGILTACSNLAALGHGS 429

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           S HG  + +   ++T + NAL+ MY +C  +  A  VF++ +  ++ +WN M+  F  + 
Sbjct: 430 SCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               AL LF  ++     P+E+++++ILSAC+  G++  GKQ+   +         F   
Sbjct: 490 LGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSM-----SRGDFNVI 544

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
             LD Y NC ++     +++  GY     EA +  ++M      P    + +LLSAC
Sbjct: 545 PRLDHY-NCMTD-----LLARAGYLD---EAYDFVNKM---PFEPDIRVLGTLLSAC 589



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 260/582 (44%), Gaps = 48/582 (8%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
           + W+ MI A V N      L  + +M+  G+R    T   ++ A   +  ++ G+++H  
Sbjct: 69  IAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSH 128

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
              +   AD  +C   V+ YAKCG+L+ +   F  M   D V+WN ++SG   +      
Sbjct: 129 VKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDV 188

Query: 159 LLYFREMGWSGEQADNVS-LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
           +  F +M  S   + N+S +     A    G L  GK +H    ++G+ +   + V   +
Sbjct: 189 IGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND--LVVKTGI 246

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           + +Y++   I  A R F     K+ V+W+A+I G+  N   +EA ++  +M +   +   
Sbjct: 247 LDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMV 306

Query: 278 IATVVTLISL-CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
               + LI + CA    L  GR VH YAI+     DL + N+++ FY+K  SL  A   F
Sbjct: 307 TPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQF 366

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
             I  + D+VS+NS+ISG            LF +M     +   +TLL IL +C++  +L
Sbjct: 367 TEIG-LKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAAL 425

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             G S H + +  G++ NT   NALM MY  CG L  A  +   + H  D   WN ++  
Sbjct: 426 GHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTM-HKRDIVSWNTMLFG 484

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
              +G  +EA+  F SM Q     PD VTL+ ++SAC +  L  EGK L     +    +
Sbjct: 485 FGIHGLGKEALSLFNSM-QDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE 564
             R+ +                             +NCM    ++      A +    + 
Sbjct: 544 IPRLDH-----------------------------YNCMTDLLARAGYLDEAYDFVNKMP 574

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           FEP+   + ++LSAC     +  G ++   +  LG    S +
Sbjct: 575 FEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTESLV 616



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 238/505 (47%), Gaps = 27/505 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV--VMGLHF 60
           F A +   T+L+  Y+     + ++ +F E   +D+V WNAMI+    + C+  V+GL F
Sbjct: 134 FAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGL-F 192

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
                 + +  + +T++ +  AL +   L++G+ VH    + G   D  +    +++YAK
Sbjct: 193 LDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA--DNVSLS 178
              +  +   F      + V+W+ ++ G + N   ++    F +M  + + A    V++ 
Sbjct: 253 SKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTPVAIG 312

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +   A  G+LS G+ +H   IK G+     ++V N++IS Y++ G +  A R F  + 
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAIKAGFILD--LTVGNTVISFYAKYGSLCDAFRQFTEIG 370

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KD+VS+N++I G   N + EE+F L H+M+    + PDI T++ +++ C++   L  G 
Sbjct: 371 LKDIVSYNSLISGCVENCRAEESFRLFHQMK-SSGIRPDITTLLGILTACSNLAALGHGS 429

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM-----IS 353
           S HGY +      +  + N+LMD Y+K   L  A+ +F+ +    D+VSWN+M     I 
Sbjct: 430 SCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHK-RDIVSWNTMLFGFGIH 488

Query: 354 GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG- 405
           GL KE L L +    +       TLLAIL +C+    ++ GK +     +  F  N I  
Sbjct: 489 GLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF--NVIPR 546

Query: 406 ---VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               N +  +    G L  A+  + ++    D      ++ AC    + +   +  K M 
Sbjct: 547 LDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQ 606

Query: 463 QQQNASPDSVTLVNVISACGNLELA 487
                +   V L N  SA    E A
Sbjct: 607 SLGETTESLVLLSNTYSAAERWEDA 631



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 176/365 (48%), Gaps = 23/365 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L   T +L  Y+       +  +F     K+ VTW+AMI   VEN  +      F
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNC-----LKQGRVVHCLSIKAGMIADSSLCNVFVN 116
            +M+   +  D   +  +   L  M C     L  GR VHC +IKAG I D ++ N  ++
Sbjct: 295 LQML---VNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVIS 351

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
            YAK G L  +   F+ +   D VS+N+++SGC+ N   E+    F +M  SG + D  +
Sbjct: 352 FYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITT 411

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L   + A + L  L +G   H   +  GY  +   S+ N+L+ MY++CG +  A+R F  
Sbjct: 412 LLGILTACSNLAALGHGSSCHGYCVVNGY--AVNTSICNALMDMYTKCGKLYVAKRVFDT 469

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  +D+VSWN ++ GF ++G  +EA  L + MQ    V PD  T++ ++S C+ S L+ E
Sbjct: 470 MHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-DTGVHPDEVTLLAILSACSHSGLVDE 528

Query: 297 GRSVHGY-------AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
           G+ +           I RL  Y     N + D  +++  L +A    N +    D+    
Sbjct: 529 GKQLFNSMSRGDFNVIPRLDHY-----NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583

Query: 350 SMISG 354
           +++S 
Sbjct: 584 TLLSA 588


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 169/560 (30%), Positives = 281/560 (50%), Gaps = 67/560 (11%)

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V   N +I   + +G+  EA  L  EM+     EPD+ T  T+IS      ++ E R +
Sbjct: 51  NVARCNWMITNLSKDGRIMEARRLFDEMR-----EPDVITWTTVISGYIKCGMIEEARRL 105

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
                R     +++   +++  Y +SN +S AE LFN + P  ++VSWN+MI G  +   
Sbjct: 106 FD---RVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM-PNKNVVSWNTMIDGYAQNGR 161

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
              + + F  +         PE                   N +  N +M M   CG + 
Sbjct: 162 IDSAMYLFEKM---------PE------------------RNVVSWNTVMSMLAQCGRIE 194

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  L  R+    D   W  +I   ++NG   EA   F  M ++   S +++    +   
Sbjct: 195 EARRLFDRMPER-DVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAM----ITGY 249

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
             NL L  E   L     + +   D    N +IT   +  D++ A  +F      N+ +W
Sbjct: 250 AQNLRLD-EALDL----FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISW 304

Query: 541 NCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
             MI+   Q      AL++F  +      +PN+ + VS+L AC+ L  L  G+Q+H  + 
Sbjct: 305 TTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIIS 364

Query: 597 HLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEA 639
              +Q+++F+ SAL++MYS C                 +   +W+ +I+AY +HG G EA
Sbjct: 365 KTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEA 424

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           I  F EM  SG +P   + + LLSACSH+GLV+EGL+Y++ ++++  +    +H+ C+VD
Sbjct: 425 INFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVD 484

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           + GR+G+L+EA+ FI+ L  +P   VWGA+L+ C+ H + K+GKQ A+ L ++EPEN G 
Sbjct: 485 LCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGT 544

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ LSN+Y + G+W++A  +
Sbjct: 545 YLLLSNIYASTGKWREAARV 564



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 190/416 (45%), Gaps = 47/416 (11%)

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG---- 166
           CN  +   +K G +  +   F  M   D ++W T++SG +     E+    F  +     
Sbjct: 55  CNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKN 114

Query: 167 ---WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY-------------EDSPY 210
              W+      +  +    A     E+    V+    +  GY             E  P 
Sbjct: 115 VVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPE 174

Query: 211 VSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   N+++SM +QCG IE A R F  M  +DV+SW A+I G + NG+ +EA  L   M
Sbjct: 175 RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM 234

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
                 E ++ +   +I+  A +L L E   +      R+   DL   N+++    ++  
Sbjct: 235 P-----ERNVVSWNAMITGYAQNLRLDEALDL----FERMPERDLPSWNTMITGLIQNGD 285

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL-CSQFSFSTLLAIL 375
           L +A  LFN + P  +++SW +MI+G            +F  ML    ++ +  T +++L
Sbjct: 286 LRRARKLFNEM-PKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVL 344

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR-ISHNSD 434
            +C++   L  G+ +H    K  + ++T  V+AL++MY  CG+L  A  +    ++   D
Sbjct: 345 GACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRD 404

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              WN +I A   +G+ +EAI  FK M ++    PD VT V ++SAC +  L  EG
Sbjct: 405 LVSWNGIIAAYAHHGYGKEAINFFKEM-RKSGFKPDDVTYVGLLSACSHAGLVEEG 459



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/556 (23%), Positives = 240/556 (43%), Gaps = 71/556 (12%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V+  N +I+  S+ G I  A R F  M   DV++W  +I G+   G  EEA  L   +  
Sbjct: 52  VARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA 111

Query: 271 MRSV------------EPDIATVVTLISLCADSLLLREGRSVHGYA-----------IRR 307
            ++V               I+    L +   +  ++     + GYA             +
Sbjct: 112 KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEK 171

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS 367
           +   +++  N++M   ++   + +A  LF+ + P  D++SW +MI+GL K      ++  
Sbjct: 172 MPERNVVSWNTVMSMLAQCGRIEEARRLFDRM-PERDVISWTAMIAGLSKNGRIDEARLL 230

Query: 368 FSTLLAILPSCNS----------PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           F      +P  N            ++L   +++  ++       +    N ++   I  G
Sbjct: 231 FDR----MPERNVVSWNAMITGYAQNLRLDEALDLFERMP--ERDLPSWNTMITGLIQNG 284

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           DL  A  L   +   +  S W  +I  C Q G  +EA+K F  M     A P+  T V+V
Sbjct: 285 DLRRARKLFNEMPKKNVIS-WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSV 343

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-- 535
           + AC NL    EG+ +H +  K++    T V +ALI MY +C ++ +A  +F+       
Sbjct: 344 LGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQR 403

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
           +L +WN +I+A++ +     A+  F+ +    F+P++++ V +LSAC+  G++  G +  
Sbjct: 404 DLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKY- 462

Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
                  F E       L+   S       ++ ++   G  G+  EA      +     +
Sbjct: 463 -------FDE-------LVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERL---ETK 505

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEAY 711
           P+     +LL+ C+    V  G Q    +LE   V PE    ++ + ++   +GK +EA 
Sbjct: 506 PSARVWGALLAGCNVHANVKIGKQAAKKLLE---VEPENAGTYLLLSNIYASTGKWREAA 562

Query: 712 EF---IKNLPIQPKPG 724
                +K+  ++ +PG
Sbjct: 563 RVRLKMKDKGLKKQPG 578



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 208/495 (42%), Gaps = 49/495 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYET-CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           T T++++ Y      E +  LF      K+VVTW AM+   + +  +      F EM  +
Sbjct: 85  TWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK 144

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQ-GRVVHCLSIKAGMIADSSLC-NVFVNMYAKCGDLN 125
            +          VS  T ++   Q GR+   + +   M   + +  N  ++M A+CG + 
Sbjct: 145 NV----------VSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIE 194

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   D +SW  +++G   N   ++  L F  M     + + VS ++ +   A
Sbjct: 195 EARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM----PERNVVSWNAMITGYA 250

Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVV 243
               L       AL +   +E  P   +   N++I+   Q GD+  A + F  M  K+V+
Sbjct: 251 QNLRLD-----EALDL---FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVI 302

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW  +I G    G+ EEA  +   M      +P+  T V+++  C++   L EG+ VH  
Sbjct: 303 SWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQI 362

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF-NAIAPMNDLVSWNSMISG-------- 354
             + +      ++++L++ YSK   L  A  +F + +    DLVSWN +I+         
Sbjct: 363 ISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGK 422

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-- 408
                FKEM     +    T + +L +C+    +E G       +K    + +I V    
Sbjct: 423 EAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK----DRSILVREDH 478

Query: 409 ---LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
              L+ +    G L  AF  ++R+        W  ++  C  + + +   +  K + + +
Sbjct: 479 YACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVE 538

Query: 466 NASPDSVTLVNVISA 480
             +  +  L++ I A
Sbjct: 539 PENAGTYLLLSNIYA 553



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 3/190 (1%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           LP+  +++T          +  LF E   K+V++W  MIT CV+       L  F  M+ 
Sbjct: 270 LPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLS 329

Query: 67  -EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             G + +  T + ++ A + +  L +G+ VH +  K      + + +  +NMY+KCG+L 
Sbjct: 330 TNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELG 389

Query: 126 SSECTF-SGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           ++   F  GM    D VSWN I++   H+ Y ++ + +F+EM  SG + D+V+    ++A
Sbjct: 390 TARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSA 449

Query: 184 SACLGELSYG 193
            +  G +  G
Sbjct: 450 CSHAGLVEEG 459


>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
 gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
          Length = 691

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 185/654 (28%), Positives = 309/654 (47%), Gaps = 66/654 (10%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK  H+  IK GY  + Y++   +L+SMY+    +  A + F  M  K++V+W  ++
Sbjct: 19  LKQGKSFHSHLIKTGYSHNVYIAC--NLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMV 76

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
             +  NGK  EA  L   M   +S  P+      ++  C     +  GR +H    R  L
Sbjct: 77  SAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSRENL 136

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY-----LCS 364
            YD++++N+L+D Y K   LS A  +F+ I    +  SWN+MISG FKE L      L +
Sbjct: 137 DYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFN 196

Query: 365 QF------SFSTLLAILPSCNSPESLEF-------------------------------G 387
           Q       S++T++A L    S  +L+F                               G
Sbjct: 197 QMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAG 256

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K IHC+ LK G  ++   V+AL+ MY NC  L  A  L  + S  + + C ++V+     
Sbjct: 257 KQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSML 316

Query: 448 NGHF-QEAIKTFKSMTQQ---QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           +G+   E  +   +M  Q     AS DS TL + +  C NL     G  +H L + S   
Sbjct: 317 SGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHE 376

Query: 504 LDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
           LD  V + L+ +Y +  ++K A  +F      ++  W+ ++   ++ +    AL LFR +
Sbjct: 377 LDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDM 436

Query: 564 ---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
                E ++  + ++L  C+ L  +  GKQ+H      G++      +AL+DMYS C   
Sbjct: 437 VTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEV 496

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +    W+ +I     +G+  EA+E+F +M  SG++P + + + +L+AC
Sbjct: 497 EDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTAC 556

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
            H+GLV E    +  M  ++ + P+ EH+ C+VD+L ++G  +E  + I  +P +P   +
Sbjct: 557 RHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTI 616

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           W +ML AC  H +T +   +AE L    P +   Y+ LSN Y  LG W    ++
Sbjct: 617 WSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLSNAYGTLGMWDSLSQV 670



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/715 (22%), Positives = 311/715 (43%), Gaps = 109/715 (15%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++  + +L++ Y++ ++   +  LF E   K++VTW  M++A   N      +  +
Sbjct: 33  GYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMVSAYTSNGKPREAIKLY 92

Query: 62  GEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M++      +  +  +++ A   +  ++ GR++H    +  +  D  L N  ++MY K
Sbjct: 93  TRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSRENLDYDIVLLNALLDMYVK 152

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC-----------LHNNYPE------------ 156
           CG L+ +   F  +   A++ SWNT++SG            L N  P+            
Sbjct: 153 CGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAG 212

Query: 157 -------KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
                  + L +  +M   G + D  +   A+   +  G L  GK IH   +K G E S 
Sbjct: 213 LAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSC 272

Query: 210 YVSVTNSLISMYSQCGDIEAAERAF------WGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           +    ++L+ MYS C  ++ A R F       G  C  +V WN+++ G+ ++ K   A +
Sbjct: 273 F--AVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVN 330

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           ++ ++        D  T+ + + +C + L +R G  VH   +      D ++ + L+D Y
Sbjct: 331 MIAQIH-HSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLY 389

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           +K  ++  A  LF+ + P  D+V+W+ ++ G            LF++M+    +     +
Sbjct: 390 AKLGNMKDAFKLFHRL-PKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIV 448

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
             +L  C+S  S+  GK +H + +K G+    + + AL+ MY  CG++     L   ++ 
Sbjct: 449 SNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVA- 507

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + D  CW  +IV C QNG   EA++ F+ M  Q    P+ VT + V++AC +  L  E +
Sbjct: 508 DRDVVCWTGIIVGCAQNGRANEALEIFRQMV-QSGLKPNEVTYLGVLTACRHAGLVVEAQ 566

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
           ++ G      M  D R++  L   Y                         CM+    Q  
Sbjct: 567 TIFG-----TMKCDHRLEPQLEHYY-------------------------CMVDLLCQAG 596

Query: 552 AEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS-FISSAL 610
                 +L   + F+P++    S+L AC                   G   N+  +S+  
Sbjct: 597 YFKEVEKLIAEMPFKPDKTIWSSMLGAC-------------------GTHRNTGLVSTIA 637

Query: 611 LDMYSNCKSNAAWSSMIS-AYGYHGKGWEAIELFHEMCNS-GIRPTKSSVISLLS 663
            ++ +NC ++ +   M+S AYG  G  W+++    E     G++   +S I + S
Sbjct: 638 ENLLANCPNDPSIYVMLSNAYGTLGM-WDSLSQVREAAKKLGVKAAGTSWIEISS 691



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 245/572 (42%), Gaps = 64/572 (11%)

Query: 79  IVSALT---QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
           IV+A+    ++  LKQG+  H   IK G   +  +    V+MYA    L  +   F  M 
Sbjct: 6   IVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMP 65

Query: 136 CADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
             + V+W T++S    N  P + + LY R +    E  +    S  + A   +GE+  G+
Sbjct: 66  VKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGR 125

Query: 195 VIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAF-----------WG------ 236
           +IH    +   E+  Y + + N+L+ MY +CG +  A + F           W       
Sbjct: 126 LIHK---RFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGY 182

Query: 237 ---------------MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
                          M  ++VVSWN II G A NG    A   + +M     ++ D  T 
Sbjct: 183 FKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGS-SRALQFVCKMH-REGIKLDKFTF 240

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
              +  C+ +  L  G+ +H Y ++  L      +++L+D YS  N L  A  LF+  + 
Sbjct: 241 PCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSG 300

Query: 342 -----MNDLVSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPSCNSPESL 384
                 + LV WNSM+SG       +  + + +Q   S       TL + L  C +  ++
Sbjct: 301 GTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNV 360

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             G  +H   +  G   + +  + L+ +Y   G++  AF L  R+    D   W+ +++ 
Sbjct: 361 RLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLP-KKDIVAWSGLLMG 419

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
           C +      A+  F+ M        D   + NV+  C +L     GK +H   +K     
Sbjct: 420 CAKMELNSLALSLFRDMV-TFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYET 478

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL- 563
           +     ALI MY +C +++    +F    + ++  W  +I   +QN     ALE+FR + 
Sbjct: 479 EQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMV 538

Query: 564 --EFEPNEISIVSILSACTQLGVLRHGKQIHG 593
               +PNE++ + +L+AC   G++   + I G
Sbjct: 539 QSGLKPNEVTYLGVLTACRHAGLVVEAQTIFG 570



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 189/398 (47%), Gaps = 24/398 (6%)

Query: 1   RGFLAHLPTS-TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           R FL    TS  ++++ Y      E ++ LF +  +++VV+WN +I    EN      L 
Sbjct: 165 RIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSS-RALQ 223

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  +M  EGI+ D  T    +   +    L  G+ +HC  +K+G+ +     +  V+MY+
Sbjct: 224 FVCKMHREGIKLDKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYS 283

Query: 120 KCGDLNSSECTF------SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
            C  L+ +   F      +G  C   V WN+++SG + +      +    ++  SG   D
Sbjct: 284 NCNGLDDAIRLFDQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVD 343

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           + +LSSA+     L  +  G  +HAL +  G+E   YV V + L+ +Y++ G+++ A + 
Sbjct: 344 SYTLSSALKVCINLLNVRLGIQVHALIVTSGHE-LDYV-VGSILVDLYAKLGNMKDAFKL 401

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  KD+V+W+ ++ G A       A  L  +M +   VE D   V  ++ +C+    
Sbjct: 402 FHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDM-VTFGVEVDQYIVSNVLKVCSSLAS 460

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           +  G+ VH + I+R    + + + +L+D YSK   +    +LF  +A   D+V W  +I 
Sbjct: 461 IGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVAD-RDVVCWTGIIV 519

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           G            +F++M+    + +  T L +L +C 
Sbjct: 520 GCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACR 557



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 181/421 (42%), Gaps = 62/421 (14%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           ++A +  C   ++L+ GKS H   +K G+S+N      L+ MY +   L+ A+ L   + 
Sbjct: 6   IVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMP 65

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             +  + W  ++ A T NG  +EAIK +  M   ++  P+      V+ ACG +     G
Sbjct: 66  VKNIVT-WTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELG 124

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY-NCNLCTWNCMISAFSQ 549
           + +H    +  +  D  + NAL+ MY +C  +  A  VF+  +   N  +WN MIS + +
Sbjct: 125 RLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFK 184

Query: 550 NKAEVRALELF------------------------RHLEF---------EPNEISIVSIL 576
                 A+ LF                        R L+F         + ++ +    L
Sbjct: 185 EGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCAL 244

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN-------------------- 616
             C+  G L  GKQIH +V   G + + F  SAL+DMYSN                    
Sbjct: 245 KTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGS 304

Query: 617 -CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
            C S   W+SM+S Y  H K   A+ +  ++ +SG      ++ S L  C +   V  G+
Sbjct: 305 ICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGI 364

Query: 676 QYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           Q +  ++       E ++ V   +VD+  + G +++A++    LP +     W  +L  C
Sbjct: 365 QVHALIVTS---GHELDYVVGSILVDLYAKLGNMKDAFKLFHRLP-KKDIVAWSGLLMGC 420

Query: 734 S 734
           +
Sbjct: 421 A 421



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 128/589 (21%), Positives = 232/589 (39%), Gaps = 109/589 (18%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D+  +V  I  C     L++G+S H + I+    +++ +  +L+  Y+    L  A  LF
Sbjct: 2   DLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLF 61

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ----FSFSTLLAILPSCNS 380
           + + P+ ++V+W +M+S             L+  ML   S+    F +S    +L +C  
Sbjct: 62  DEM-PVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSV---VLKACGL 117

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
              +E G+ IH    +     + + +NAL+ MY+ CG L  A  +  RI   ++++ WN 
Sbjct: 118 VGEIELGRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNT 177

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQ-------------QNASP----------------DS 471
           +I    + G  +EA+  F  M  +             +N S                 D 
Sbjct: 178 MISGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDK 237

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
            T    +  C        GK +H   LKS +       +AL+ MY  C  +  A  +F+ 
Sbjct: 238 FTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQ 297

Query: 532 CYN-----CN-LCTWNCMISAF---SQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
                   C+ L  WN M+S +    +N+A V  +    H     +  ++ S L  C  L
Sbjct: 298 YSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINL 357

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMI 627
             +R G Q+H  +   G + +  + S L+D+Y+                 K   AWS ++
Sbjct: 358 LNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLL 417

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY--------- 678
                      A+ LF +M   G+   +  V ++L  CS    +  G Q +         
Sbjct: 418 MGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYE 477

Query: 679 ------NNMLEEYDVRPETEHHV----CIVD---------MLG--RSGKLQEAYEFIKNL 717
                   +++ Y    E E  +    C+ D         ++G  ++G+  EA E  + +
Sbjct: 478 TEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQM 537

Query: 718 ---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYY 760
               ++P    +  +L+AC H G     + +   +    +LEP+   YY
Sbjct: 538 VQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYY 586



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG+     T T+L+  YS     E  L LF    ++DVV W  +I  C +N      L  
Sbjct: 474 RGYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEI 533

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           F +MV+ G++ +  T L +++A     C   G VV   +I   M  D  L
Sbjct: 534 FRQMVQSGLKPNEVTYLGVLTA-----CRHAGLVVEAQTIFGTMKCDHRL 578


>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
 gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 190/656 (28%), Positives = 316/656 (48%), Gaps = 50/656 (7%)

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
           L   R +  +G      + S+AVA S      ++    HAL +  G   + +  VTNSL 
Sbjct: 38  LAALRGLLQAGLPLSPTAFSAAVARSGPDALPAF----HALAVASGL--AAFAPVTNSLA 91

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDI 278
           + Y++     AA R F     +D  S+N I+         ++A      M     V PD 
Sbjct: 92  ARYAKGNSFPAAARVFAAARSRDTRSYNTILSA---TPDPDDALAFAARMLRTGDVRPDA 148

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
            T    +SL A        R +H  A R  +  D+ + N+L+  YS+   +  A  +F  
Sbjct: 149 VTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEE 208

Query: 339 IAPMNDLVSWNSMISGLFKE----------MLYLCSQFSFS----TLLAILPSCNSPESL 384
           + P  DLVSWN+++ GL ++           L +  Q        ++ +++P+C +   L
Sbjct: 209 M-PARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKL 267

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           E G+ IH + +KLG   +    N L+ MY  CG    A  L + +    D   W  V+  
Sbjct: 268 ELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGER-DVISWTTVM-- 324

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
            + +G  ++A+  F  M ++   +P+ VT V ++S+      A EG+ +H + LK+ +  
Sbjct: 325 -SMDG--EDAVSLFNGM-RRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSD 380

Query: 505 DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE 564
                N+LITMY + R +  A  +F    +  +  WN +IS ++QN+    ALE F  + 
Sbjct: 381 KAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMM 440

Query: 565 --FEPNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
              +PNE +  SILSA T +    + +G+  H     LG   + ++S AL+DMY+     
Sbjct: 441 KIMKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSL 500

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +S  AW+++ISA   HG     + LF++M  SG+ P    ++S+L+AC
Sbjct: 501 EESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTAC 560

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
            +SG V  G + +++M  ++      EH+ C+VDMLGR+G+L+EA E +  +P  P    
Sbjct: 561 RYSGFVSLGREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSA 620

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             ++L AC  HG+T +G++VA +L + EP   G Y+ LSN+Y   G W     + +
Sbjct: 621 LQSLLGACRIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRR 676



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 240/497 (48%), Gaps = 32/497 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A  P + SL   Y+  + F ++  +F    ++D  ++N +++A  +       L F 
Sbjct: 79  GLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATPDPDDA---LAFA 135

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M+  G +R D+ T  + +S           R +H L+ +AG+  D  + N  V  Y++
Sbjct: 136 ARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSR 195

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN--YPEKCLLYFREMGWSGEQADNVSLS 178
            G ++++   F  M   D VSWN ++ G   +     E   ++ R +     + D +S+ 
Sbjct: 196 GGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVC 255

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           S + A    G+L  G+ IH   +KLG E   +VS+ N L++MY +CG    A R F  M 
Sbjct: 256 SVIPACGAEGKLELGRQIHGFAVKLGVEG--HVSIANVLVAMYYKCGTPGCARRLFEFMG 313

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DV+SW  ++   +++G  E+A  L + M+    V P+  T V ++S        REG+
Sbjct: 314 ERDVISWTTVM---SMDG--EDAVSLFNGMR-RDGVAPNEVTFVAMLSSMPGDCPAREGQ 367

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
            +H   ++  L       NSL+  Y+K   +  A ++F+ + P +++++WN++ISG    
Sbjct: 368 MIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFS-LMPHSEIIAWNALISGYAQN 426

Query: 356 ---------FKEMLYLC--SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                    F  M+ +   ++ +F+++L+ + +  +  S+ +G+  HC  LKLG   +  
Sbjct: 427 EMCQDALEAFLAMMKIMKPNETTFASILSAVTAVET-VSMAYGQMYHCQALKLGLGASEY 485

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ MY   G L  ++       H S  + W  +I A +++G++   +  F  M   
Sbjct: 486 VSGALIDMYAKRGSLEESWKAFGETVHRSLIA-WTAIISANSKHGNYDAVVSLFNDMV-G 543

Query: 465 QNASPDSVTLVNVISAC 481
              +PD V L++V++AC
Sbjct: 544 SGVAPDGVVLLSVLTAC 560



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 157/607 (25%), Positives = 282/607 (46%), Gaps = 51/607 (8%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L++ +G+ A + + N     YAK     ++   F+     DT S+NTI+S       P
Sbjct: 72  HALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSA---TPDP 128

Query: 156 EKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
           +  L +   M  +G+ + D V+ +  ++ +A  GE    + +HAL  + G     +V   
Sbjct: 129 DDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVG-- 186

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK-FEEAFDLLHEMQLMRS 273
           N+L++ YS+ G ++AA + F  M  +D+VSWNA++ G A +G+   E   +   M     
Sbjct: 187 NALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGD 246

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           V PD  +V ++I  C     L  GR +HG+A++  +   + + N L+  Y K  +   A 
Sbjct: 247 VRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCAR 306

Query: 334 LLFNAIAPMNDLVSWNSMIS-------GLFKEML---YLCSQFSFSTLLAILP-SCNSPE 382
            LF  +    D++SW +++S        LF  M       ++ +F  +L+ +P  C + E
Sbjct: 307 RLFEFMGE-RDVISWTTVMSMDGEDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPARE 365

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
               G+ IH   LK   S+     N+L+ MY     +  A  +   + H S+   WN +I
Sbjct: 366 ----GQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPH-SEIIAWNALI 420

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE---LAFEGKSLHGLALK 499
               QN   Q+A++ F +M +     P+  T  +++SA   +E   +A+ G+  H  ALK
Sbjct: 421 SGYAQNEMCQDALEAFLAMMKIMK--PNETTFASILSAVTAVETVSMAY-GQMYHCQALK 477

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
             +G    V  ALI MY +   ++ +   F    + +L  W  +ISA S++      + L
Sbjct: 478 LGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSL 537

Query: 560 FRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
           F  +      P+ + ++S+L+AC   G +  G++I           +S  +    +++  
Sbjct: 538 FNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIF----------DSMAAKHGAELWPE 587

Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
                 ++ ++   G  G+  EA EL  +M +    P+ S++ SLL AC   G  D G +
Sbjct: 588 -----HYACVVDMLGRAGRLEEAEELMLQMPSG---PSVSALQSLLGACRIHGNTDVGER 639

Query: 677 YYNNMLE 683
             + + E
Sbjct: 640 VASVLTE 646



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 221/485 (45%), Gaps = 25/485 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEG-I 69
           +L+TAYS     +++  +F E   +D+V+WNA++    ++  C    +  F  M+++G +
Sbjct: 188 ALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDV 247

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R D  ++  ++ A      L+ GR +H  ++K G+    S+ NV V MY KCG    +  
Sbjct: 248 RPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARR 307

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D +SW T+MS        E  +  F  M   G   + V+  + +++      
Sbjct: 308 LFEFMGERDVISWTTVMS-----MDGEDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCP 362

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
              G++IHA+ +K    D    +  NSLI+MY++   ++ A   F  M   ++++WNA+I
Sbjct: 363 AREGQMIHAVCLKTSLSDK--AAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALI 420

Query: 250 DGFALNGKFEEAFD-LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
            G+A N   ++A +  L  M++M+  E   A++++ ++   +++ +  G+  H  A++  
Sbjct: 421 SGYAQNEMCQDALEAFLAMMKIMKPNETTFASILSAVT-AVETVSMAYGQMYHCQALKLG 479

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           LG    +  +L+D Y+K  SL ++   F        L++W ++IS             LF
Sbjct: 480 LGASEYVSGALIDMYAKRGSLEESWKAFGETV-HRSLIAWTAIISANSKHGNYDAVVSLF 538

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYIN 415
            +M+          LL++L +C     +  G+ I      K G          ++ M   
Sbjct: 539 NDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGAELWPEHYACVVDMLGR 598

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            G L  A  L+ ++      S    ++ AC  +G+     +    +T+ +     +  L+
Sbjct: 599 AGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGNTDVGERVASVLTETEPTESGAYVLL 658

Query: 476 NVISA 480
           + I A
Sbjct: 659 SNIYA 663


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 249/466 (53%), Gaps = 33/466 (7%)

Query: 344 DLVSWNSMISGLFKE-------MLYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIH 391
           D++ WN++I G  ++        +Y+  Q S       T L +L +C        GK IH
Sbjct: 64  DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIH 123

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
               K GF +N    N+L+ MY   G +  A  +  ++ H+     W  +I    QNG  
Sbjct: 124 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL-HDRTVVSWTSIISGYVQNGDP 182

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EA+  FK M +Q N  PD + LV+V++A  N+E   +GKS+HGL  K  +  +  +  +
Sbjct: 183 MEALNVFKEM-RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS 241

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
           L TMY +   ++ A   F      NL  WN MIS ++ N     A++LFR +       +
Sbjct: 242 LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVD 301

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
            I++ S + A  Q+G L   + + G++    +++++F+++ L+DMY+ C           
Sbjct: 302 SITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD 361

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               K    WS MI  YG HG G EAI L++EM  +G+ P   + I LL+AC +SGLV E
Sbjct: 362 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKE 421

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G + ++ ++ ++ + P  +H+ C+VD+LGR+G L +AY+FI ++PI+P   VWGA+LSAC
Sbjct: 422 GWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 480

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             H   ++G+  AE LF L+P N G+Y+ LSN+Y +   W     +
Sbjct: 481 KIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANV 526



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 200/441 (45%), Gaps = 19/441 (4%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           + +V+Y   +   F E    D++ WNA+I    +   V   +  + +M    +  +  T 
Sbjct: 47  FGDVNYAHKA---FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTF 103

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           L ++ A    +    G+ +H  + K G  ++  + N  V+MYAK G ++ +   F  +H 
Sbjct: 104 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 163

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
              VSW +I+SG + N  P + L  F+EM     + D ++L S + A   + +L  GK I
Sbjct: 164 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 223

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H L  KLG E  P + +  SL +MY++ G +E A   F  M   +++ WNA+I G+A NG
Sbjct: 224 HGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
             EEA  L  EM + +++  D  T+ + +   A    L   R + GY  +     D  + 
Sbjct: 282 YGEEAIKLFREM-ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 340

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
             L+D Y+K  S+  A  +F+ +A   D+V W+ MI G            L+ EM     
Sbjct: 341 TGLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
             +  T + +L +C +   ++ G  +       G   +    + ++ +    G L  A+ 
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 459

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            +  +      S W  ++ AC
Sbjct: 460 FIMSMPIKPGVSVWGALLSAC 480



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 211/464 (45%), Gaps = 23/464 (4%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           F+N     GD+N +   F  +   D + WN I+ G    N  +  +  + +M  S    +
Sbjct: 40  FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 99

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             +    + A         GK IH    K G+  +  V V NSL+SMY++ G I  A   
Sbjct: 100 CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN--VFVQNSLVSMYAKFGQISYARIV 157

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  + VVSW +II G+  NG   EA ++  EM+   +V+PD   +V++++   +   
Sbjct: 158 FDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC-NVKPDWIALVSVMTAYTNVED 216

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L +G+S+HG   +  L ++  ++ SL   Y+K   +  A   FN +   N L+ WN+MIS
Sbjct: 217 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPN-LILWNAMIS 275

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF+EM+    +    T+ + + +     SLE  + +  +  K  + +
Sbjct: 276 GYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD 335

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +T     L+ MY  CG +  A  +  R++ + D   W+++I+    +GH QEAI  +  M
Sbjct: 336 DTFVNTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGHGQEAICLYNEM 394

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +Q    P+  T + +++AC N  L  EG  L  L     +    +  + ++ + GR   
Sbjct: 395 -KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGY 453

Query: 522 IKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELF 560
           +  A     S      +  W  ++SA   ++     E+ A +LF
Sbjct: 454 LNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 497



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 158/296 (53%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++    SL++ Y+       +  +F +  ++ VV+W ++I+  V+N   +  L+ F
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM +  ++ D   L+ +++A T +  L QG+ +H L  K G+  +  +      MYAK 
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   + + WN ++SG  +N Y E+ +  FREM     + D++++ SAV
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ASA +G L   + +     K  Y D  +V+    LI MY++CG I  A   F  +  KD
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVN--TGLIDMYAKCGSIYLARCVFDRVADKD 367

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           VV W+ +I G+ L+G  +EA  L +EM+    V P+  T + L++ C +S L++EG
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMK-QAGVCPNDGTFIGLLTACKNSGLVKEG 422


>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 606

 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 161/499 (32%), Positives = 260/499 (52%), Gaps = 36/499 (7%)

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           +   L+  Y    S  +A  LF+ + P  D+++W SMI+G            +F  ML  
Sbjct: 43  LTTDLIKSYFDKGSFEEAHTLFDEM-PHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRD 101

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVA 421
             + +  T+ A+L +C S ++L  GK +H   +K+G   ++I V NALM MY  C D + 
Sbjct: 102 GVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMD 161

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA-SPDSVTLVNVISA 480
              L+       +   W  +I   T        ++ F+ M  ++   SP S ++   +SA
Sbjct: 162 NARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIA--VSA 219

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C ++  +  GK +H   +      +  V NA++ MY RCR    A  +F      +  TW
Sbjct: 220 CASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITW 279

Query: 541 NCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I+ F +      +L +F  +    F PN  +  S+++AC  L +L  G+Q+HG + H
Sbjct: 280 NTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIH 338

Query: 598 LGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIEL 642
            G   N  +S+AL+DMY+ C + A               +W+SM+  YG HG G EA++L
Sbjct: 339 RGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDL 398

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F+EM  SGI+P K   +++LSACSH+GLVDEGL+Y+  M   Y+V P+ + + C+VD+L 
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLS 458

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+G+++EAYE I+N+P +P   +W A+L AC  +    + K  A  + +++P   G Y+ 
Sbjct: 459 RAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVL 518

Query: 763 LSNMYVALGRWKDAVEIGK 781
           LSN   A G W D   + K
Sbjct: 519 LSNFSAAEGNWADFASLRK 537



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 236/492 (47%), Gaps = 25/492 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+ +Y +   FE +  LF E  ++DV+ W +MIT            + F  M+ +G+
Sbjct: 44  TTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGV 103

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGD-LNSS 127
           + ++ T+  ++ A   +  L  G++VH L+IK G    S  + N  ++MYA C D ++++
Sbjct: 104 KPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNA 163

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +   + VSW T+++G  H       L  FR+M     +    S S AV+A A +
Sbjct: 164 RLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASI 223

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G  + GK +HA  I  G+E +  + V N+++ MY +C     A++ F  MT KD ++WN 
Sbjct: 224 GSSNLGKQVHAAVINHGFESN--LPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNT 281

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I GF     +E     +    +     P+  T  ++I+ CA+  +L  G+ +HG  I R
Sbjct: 282 LIAGFETLDSYESL--CIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  +L + N+L+D Y+K  +++ +  +F+ +   N LVSW SM+ G            L
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTN-LVSWTSMMIGYGAHGHGKEAVDL 398

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN---ALMHM 412
           F EM+    +      +A+L +C+    ++ G  +  ++L   + N     +    ++ +
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEG--LRYFRLMTSYYNVAPDRDIYACVVDL 456

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDS 471
               G +  A+ L++ +    D S W  ++ AC +      + +   K +  + N +   
Sbjct: 457 LSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTY 516

Query: 472 VTLVNVISACGN 483
           V L N  +A GN
Sbjct: 517 VLLSNFSAAEGN 528



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 222/490 (45%), Gaps = 30/490 (6%)

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
           + L    +  Y   G    +   F  M   D ++W ++++G    N+  +    F  M  
Sbjct: 41  TGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLR 100

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD- 226
            G + +  ++S+ + A   L  L  GK++H L IK+G + S  + V N+L+ MY+ C D 
Sbjct: 101 DGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSS-IYVDNALMDMYATCCDS 159

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA--TVVTL 284
           ++ A   F  +  K+ VSW  +I G+       +AF  L   + M   E +++  +    
Sbjct: 160 MDNARLVFEDIGTKNAVSWTTLITGYTHR---RDAFGGLRVFRQMFMEEGELSPFSFSIA 216

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +S CA       G+ VH   I      +L +MN+++D Y +    S+A+ LF  +    D
Sbjct: 217 VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMT-QKD 275

Query: 345 LVSWNSMISG-----------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            ++WN++I+G           +F +M+   +  + F+F++++A   +C +   L  G+ +
Sbjct: 276 TITWNTLIAGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIA---ACANLAILYCGQQL 332

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   +  G  NN    NAL+ MY  CG++  +  +   + H +  S W  +++    +GH
Sbjct: 333 HGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVS-WTSMMIGYGAHGH 391

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQ 509
            +EA+  F  M       PD +  + V+SAC +  L  EG     L      +  D  + 
Sbjct: 392 GKEAVDLFNEMV-GSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIY 450

Query: 510 NALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEP 567
             ++ +  R   +K A  + E+  +  +   W  ++ A  + K   ++ L   + LE +P
Sbjct: 451 ACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKP 510

Query: 568 NEISIVSILS 577
           N+     +LS
Sbjct: 511 NKAGTYVLLS 520



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 3/249 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++LP   ++L  Y        +  LF E   KD +TWN +I A  E       L  F
Sbjct: 240 GFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLI-AGFETLDSYESLCIF 298

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +MV EG   +  T   +++A   +  L  G+ +H   I  G+  +  L N  ++MYAKC
Sbjct: 299 SQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKC 358

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  S   FSGM   + VSW ++M G   + + ++ +  F EM  SG + D +   + +
Sbjct: 359 GNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVL 418

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
           +A +  G +  G     L     Y  +P   +   ++ + S+ G ++ A      M  K 
Sbjct: 419 SACSHAGLVDEGLRYFRLMTSY-YNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKP 477

Query: 241 DVVSWNAII 249
           D   W A++
Sbjct: 478 DESIWVALL 486


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 212/818 (25%), Positives = 383/818 (46%), Gaps = 60/818 (7%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y      + +   F    +K++ +W +++ A          L  F +M++ G+  D
Sbjct: 170 LVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPD 229

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
               L  ++    +  L+ G  +H       + +D  + N  V+MY KCG L+ ++  F 
Sbjct: 230 RLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFD 289

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SLSSAVAASACLGE 189
            +   + +SW  ++S    N    +     R M   G + D V   +L +  ++   L E
Sbjct: 290 CLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDE 349

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM---TCKDVVSWN 246
            S+    + +G  L  E      V  +L+SM+++CG ++ A   F  +   + + +  WN
Sbjct: 350 DSWMAHDYIVGGGLDRE----AVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWN 405

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I  +A  G  +EA  LL  +QL + V+P+  T ++ +  C+    L++GR++H     
Sbjct: 406 AMITAYAHRGCSKEALFLLDSLQL-QGVKPNCITFISSLGACSS---LQDGRALHLLIHE 461

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLY 361
                ++ + N+L+  Y K  SL  +  LF+ +A   DL SWNS I+     G   E + 
Sbjct: 462 SGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAE-KDLASWNSAIAAHSYHGRSDECIK 520

Query: 362 LCSQ-------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L  Q       +   T L  L SC  P SL+ G  +H   ++ G+  +T+  +A+++MY 
Sbjct: 521 LLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYG 580

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  +  R+    D   W  ++    Q G  ++ ++ F+SM  +    P  VTL
Sbjct: 581 RCGGLDRAREIFTRVK-TFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHE-GLKPTGVTL 638

Query: 475 VNVIS--ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           VN+I+  A   LE   +G  +  LA +S +  +T V N+LI M+   R +  A  +F+  
Sbjct: 639 VNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRN 698

Query: 533 YNCNLCTWNCMISAFSQ-NKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
              ++     M++A+ +  + +  AL LF  +     EP+ +++V+ +SAC  L      
Sbjct: 699 PEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSS 758

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
           K++H     LG +  + +++ L+DMY                  ++   W++M  AY   
Sbjct: 759 KRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQC 818

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH 693
           G     + L   M   G RP   + +SLLS C HSGL++E    +  M  E+ + P  +H
Sbjct: 819 GVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKH 878

Query: 694 HVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKMGKQVAEL--- 748
           + C++D+L R+G+LQ+A +FI  + +       +W A+L AC   G++    + A     
Sbjct: 879 YSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAM 938

Query: 749 -LFKLEPEN----VGYYISLSNMYVALGRWKDAVEIGK 781
            + K+EP +       +++L+N+  A G W +A+ I K
Sbjct: 939 DVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRK 976



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 181/733 (24%), Positives = 344/733 (46%), Gaps = 64/733 (8%)

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSS-------LCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           ++  L QG+ +H    ++G++ D         L N  V MY KCG  + ++  F  +   
Sbjct: 26  RLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHK 85

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           +  SW +I+    H     + L  F +M  +G + D +  +  +     LG+L+ GK +H
Sbjct: 86  NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLH 145

Query: 198 ALGIKLG-----YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           A   + G      E+S    + N L+ MY +CG  + A+RAF  +  K++ SW +I+  +
Sbjct: 146 AQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAY 205

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
              G   +A +  H+M +   VEPD    +  +++C     L +G  +H     + L  D
Sbjct: 206 FHAGLHAQALERFHQM-IKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSD 264

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEML 360
           L + N+L+  Y K   L  A+ LF+ +   N ++SW  ++S            GL + M 
Sbjct: 265 LEIGNALVSMYGKCGRLDLAKELFDCLERRN-VISWTILVSVFAENGRRRETWGLLRSMA 323

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDL 419
               +     LL +L  C+S   L+    + H + +  G     +   AL+ M+  CG +
Sbjct: 324 VEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRV 383

Query: 420 VAAFSLLQRISHNSDT--SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
             A  + ++++ +S     CWN +I A    G  +EA+    S+ Q Q   P+ +T ++ 
Sbjct: 384 DKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL-QLQGVKPNCITFISS 442

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC +L+   +G++LH L  +S    +  V NAL+TMYG+C  +  ++ +F      +L
Sbjct: 443 LGACSSLQ---DGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDL 499

Query: 538 CTWNCMISAFS---QNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN  I+A S   ++   ++ L+  R   F   +++ ++ L++CT    L+ G  +H  
Sbjct: 500 ASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEK 559

Query: 595 VFHLGFQENSFISSALLDMYSNCKS-NAA--------------WSSMISAYGYHGKGWEA 639
           +   G++ ++ ++SA+++MY  C   + A              W+ M++ Y   G+  + 
Sbjct: 560 IVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQV 619

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGL--VDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +E F  M + G++PT  ++++L++  + SGL    +G+ + +++  E  +  ET     +
Sbjct: 620 MEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGV-WISSLAWESGLESETMVANSL 678

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK------ 751
           ++M      L +A       P +    +   ML+A   +   + GK+ A  LF       
Sbjct: 679 IEMFSEFRSLSQARAIFDRNP-EKSVALHTTMLAA---YVKGERGKEAALTLFARMLLEG 734

Query: 752 LEPENVGYYISLS 764
           LEP +V    ++S
Sbjct: 735 LEPSSVTLVTAMS 747



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 166/750 (22%), Positives = 329/750 (43%), Gaps = 58/750 (7%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    +L++ Y      + +  LF     ++V++W  +++   EN            M  
Sbjct: 265 LEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAV 324

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGR-VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           EGI+ D   LL +++  +    L +   + H   +  G+  ++ +    ++M+A+CG ++
Sbjct: 325 EGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVD 384

Query: 126 SSECTFSGM--HCADTVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            +   F  +  H A  +  WN +++   H    ++ L     +   G + + ++  S++ 
Sbjct: 385 KAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLG 444

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
           A + L +   G+ +H L  + G++    VSV N+L++MY +CG +  + + F  M  KD+
Sbjct: 445 ACSSLQD---GRALHLLIHESGFDQE--VSVANALVTMYGKCGSLLDSAKLFSEMAEKDL 499

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
            SWN+ I   + +G+ +E   LL +M+    +   + T +T ++ C D   L++G  +H 
Sbjct: 500 ASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKV-TFLTALNSCTDPASLQDGVLMHE 558

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------- 355
             ++     D ++ +++++ Y +   L +A  +F  +    D++ W  M++         
Sbjct: 559 KIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTF-DVILWTGMLTVYCQLGRTK 617

Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEF---GKSIHCWQLKLGFSNNTIGVN 407
                F+ ML+   + +  TL+ ++ +C +   LE    G  I     + G  + T+  N
Sbjct: 618 QVMEHFRSMLHEGLKPTGVTLVNLI-TCVADSGLEHFRDGVWISSLAWESGLESETMVAN 676

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ M+     L  A ++  R    S  +    ++ A  +    +EA  T  +    +  
Sbjct: 677 SLIEMFSEFRSLSQARAIFDRNPEKS-VALHTTMLAAYVKGERGKEAALTLFARMLLEGL 735

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P SVTLV  +SACG L      K +H  A +  +  +T V N L+ MYG+  D+ +A  
Sbjct: 736 EPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARY 795

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV 584
           +F+     N+ TWN M  A+ Q       L L R ++   + P+ ++ VS+LS C   G+
Sbjct: 796 IFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGL 855

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           L               +E  +   A+   +    S   +S +I      G+  +A +   
Sbjct: 856 L---------------EEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIA 900

Query: 645 EMCNSGIRPTKSSV-ISLLSACSHSGLVDEGLQYYNNMLEEYD-VRPETEH-----HVCI 697
            +  S   P  S + ++LL AC   G      +       + + + P ++H     HV +
Sbjct: 901 RISVSS--PASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVAL 958

Query: 698 VDMLGRSGKLQEAYEFIKNLP---IQPKPG 724
            ++   SG   EA    K +    ++ +PG
Sbjct: 959 ANICAASGNWDEALSIRKAMAEKGLRKEPG 988



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/541 (22%), Positives = 221/541 (40%), Gaps = 35/541 (6%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   +  + +L+T Y        S  LF E   KD+ +WN+ I A   +      +   
Sbjct: 463  GFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLL 522

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +M  EG  ++  T L  +++ T    L+ G ++H   ++ G  AD+ + +  +NMY +C
Sbjct: 523  DQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRC 582

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            G L+ +   F+ +   D + W  +++        ++ + +FR M   G +   V+L + +
Sbjct: 583  GGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLI 642

Query: 182  A--ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
               A + L     G  I +L  + G E    V+  NSLI M+S+   +  A   F     
Sbjct: 643  TCVADSGLEHFRDGVWISSLAWESGLESETMVA--NSLIEMFSEFRSLSQARAIFDRNPE 700

Query: 240  KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            K V     ++  +    + +EA   L    L+  +EP   T+VT +S C         + 
Sbjct: 701  KSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKR 760

Query: 300  VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----G 354
            VH  A    L  +  + N L+D Y K+  +  A  +F+  A   ++ +WN+M       G
Sbjct: 761  VHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDR-ALRRNVTTWNAMAGAYRQCG 819

Query: 355  LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIGV 406
            + + +L+L              T +++L  C     LE  + +    + + G   +    
Sbjct: 820  VTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHY 879

Query: 407  NALMHMYINCGDLVAAFSLLQRISHNSDTSC--WNIVIVACTQNGHFQEAIKTFKSM--- 461
            + ++ +    G+L  A   + RIS +S  S   W  ++ AC   G+     +        
Sbjct: 880  SCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMD 939

Query: 462  ------TQQQNASPDSVTLVNVISACGN------LELAFEGKSLHGLALKSLMGLDTRVQ 509
                    Q + S   V L N+ +A GN      +  A   K L     +SL+ +  R+ 
Sbjct: 940  VEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLH 999

Query: 510  N 510
             
Sbjct: 1000 E 1000



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 33/270 (12%)

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ-------NALITMYGRCRDIKSASTV 528
            ++  CG L    +GK LH    +S + LD R +       N L+ MYG+C     A   
Sbjct: 19  RLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRA 78

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
           F+S  + N+ +W  ++ A+       +ALE F  +     EP+ +    +L  C +LG L
Sbjct: 79  FDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDL 138

Query: 586 RHGKQIHGHVFHLGF----QENS---FISSALLDMYSNC---------------KSNAAW 623
             GK++H  +   G     +E S   F+ + L+ MY  C               K+  +W
Sbjct: 139 AQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSW 198

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +S++ AY + G   +A+E FH+M  +G+ P +   ++ L+ C     +++G   +   ++
Sbjct: 199 TSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ-IQ 257

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
           +  +  + E    +V M G+ G+L  A E 
Sbjct: 258 DKPLDSDLEIGNALVSMYGKCGRLDLAKEL 287



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 32/241 (13%)

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGF----QENS---FISSALLDMYSNC------ 617
           S   +L  C +LG L  GK++H  +   G     +E S   F+ + L+ MY  C      
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                    K+  +W+S++ AY + G   +A+E FH+M  +G+ P +     LL  C   
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135

Query: 669 GLVDEGLQYYNNMLEE---YDVRPETEHHV---CIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           G + +G + +  + E     D R E+       C+V M G+ G+  EA     ++     
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIA-HKN 194

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGYYISLSNMYVALGRWKDAVEIG 780
              W ++L A  H G      +    + K  +EP+ + +  +L N+   L R +D   I 
Sbjct: 195 IFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAAL-NVCGILKRLEDGAGIH 253

Query: 781 K 781
           +
Sbjct: 254 R 254


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 185/606 (30%), Positives = 292/606 (48%), Gaps = 45/606 (7%)

Query: 215 NSLISMYSQCGD--IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           N L++ YS+     + AA R F  +  +D VSWNA++   A +G   EA+ LL  M    
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH--- 85

Query: 273 SVEPDIATVVTLISLCADSLLLRE---GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
             +   +    L S    + + R    G  +   A++  L  ++   ++L+D Y+K   +
Sbjct: 86  -AQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A  +F+ + P  + VSWN++I+G            LF EM         +T  ++L +
Sbjct: 145 RDARQVFDGM-PERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA 203

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
              P        +H   +K G +     +NA +  Y  CG L  +  +   I    D   
Sbjct: 204 VEGPSCF-LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFEGKSLHGL 496
           WN ++ A T NG   EA+K F  M Q+    PD  +  ++IS+C  +     +G+ +HGL
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 497 ALKSLMGLDTRVQNALITMYGRCRD---IKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            +KS +   T V NALI MY R  +   ++ A   F S    +  +WN M++ +SQ+   
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLS 382

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL+ FR +       +E +  + L + ++L VL+ GKQIHG V H GF  N F+SS+L
Sbjct: 383 ADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSL 442

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           + MYS                  S+  W++MI  Y  HG+      LF+EM         
Sbjct: 443 IFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDH 502

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + + L+++CSH+GLVDEG +  N M  +Y V    EH+ C VD+ GR+G+L +A + I 
Sbjct: 503 ITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLID 562

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++P +P   VW  +L AC  HG+ ++   VA  LF  EP     Y+ LS+MY  LG W D
Sbjct: 563 SMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSD 622

Query: 776 AVEIGK 781
              + +
Sbjct: 623 RATVQR 628



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 280/619 (45%), Gaps = 76/619 (12%)

Query: 8   PTS-TSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           PT    LLTAYS  S     ++  +F E   +D V+WNA++ A   +            M
Sbjct: 25  PTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             +G+   ++    + SAL      ++   G  +  L++K+G+  +    +  +++YAKC
Sbjct: 85  HAQGL---ASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKC 141

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLS 178
           G +  +   F GM   +TVSWN +++G   +      L  F EM   G + ++A   SL 
Sbjct: 142 GRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL 201

Query: 179 SAVAASAC-LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +AV   +C L    +GK++   G  LG      ++V N+ I+ YSQCG ++ + R F G+
Sbjct: 202 TAVEGPSCFLMHQLHGKIVK-YGSALG------LTVLNAAITAYSQCGSLKDSRRIFDGI 254

Query: 238 -TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLR 295
              +D++SWNA++  +  NG  +EA      M     V PD+ +  ++IS C++      
Sbjct: 255 GDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDH 314

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS---LSKAELLFNAIAPMNDLVSWNSMI 352
           +GR +HG  I+  L     + N+L+  Y++ N    +  A   FN++  + D VSWNSM+
Sbjct: 315 QGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVSWNSML 373

Query: 353 SGLFKEMLY---------LCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +G  +  L          +CS      +++FS   A L S +    L+ GK IH   +  
Sbjct: 374 TGYSQHGLSADALKFFRCMCSENVRTDEYAFS---AALRSSSELAVLQLGKQIHGLVIHS 430

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF++N    ++L+ MY   G +  A    +    +S    WN +I    Q+G  +     
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP-WNAMIFGYAQHGQAENVDIL 489

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F  M Q++ A  D +T V +I++C +  L  EG               + + N + T YG
Sbjct: 490 FNEMLQRK-APLDHITFVGLITSCSHAGLVDEG---------------SEILNTMETKYG 533

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILS 577
                              +  + C +  + +     +A +L   + FEP+ +  +++L 
Sbjct: 534 ---------------VPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLG 578

Query: 578 ACTQLGVLRHGKQIHGHVF 596
           AC   G +     +  H+F
Sbjct: 579 ACRIHGNVELASDVASHLF 597



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 210/472 (44%), Gaps = 24/472 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  +++LL  Y+       +  +F     ++ V+WNA+I    E+  +   L  F
Sbjct: 123 GLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF 182

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EG+  D  T   +++A+   +C    + +H   +K G     ++ N  +  Y++C
Sbjct: 183 LEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQC 241

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSS 179
           G L  S   F G+    D +SWN ++    HN   ++ + +F R M  SG   D  S +S
Sbjct: 242 GSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTS 301

Query: 180 AVAASACLGELSY-GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD---IEAAERAFW 235
            +++ +  G   + G+VIH L IK   E      V N+LI+MY++  +   +E A + F 
Sbjct: 302 IISSCSEHGHDDHQGRVIHGLVIKSALEG--VTPVCNALIAMYTRYNENCMMEDAYKCFN 359

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  KD VSWN+++ G++ +G   +A      M    +V  D       +   ++  +L+
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCM-CSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ +HG  I      +  + +SL+  YSKS  +  A   F   A  +  V WN+MI G 
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVPWNAMIFGY 477

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNN 402
                      LF EML   +     T + ++ SC+    ++ G  I +  + K G    
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR 537

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
                  + +Y   G L  A  L+  +    D   W  ++ AC  +G+ + A
Sbjct: 538 MEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 155/460 (33%), Positives = 248/460 (53%), Gaps = 33/460 (7%)

Query: 344 DLVSWNSMISGLFKE-------MLYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIH 391
           D++ WN++I G  ++        +Y+  Q S       T L +L +C        GK IH
Sbjct: 49  DILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIH 108

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
               K GF +N    N+L+ MY   G +  A  +  ++ H+     W  +I    QNG  
Sbjct: 109 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL-HDRTVVSWTSIISGYVQNGDP 167

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
            EA+  FK M +Q N  PD + LV+V++A  N+E   +GKS+HGL  K  +  +  +  +
Sbjct: 168 MEALNVFKEM-RQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVIS 226

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
           L TMY +   ++ A   F      NL  WN MIS ++ N     A++LFR +       +
Sbjct: 227 LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVD 286

Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
            I++ S + A  Q+G L   + + G++    +++++F+++ L+DMY+ C           
Sbjct: 287 SITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD 346

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               K    WS MI  YG HG G EAI L++EM  +G+ P   + I LL+AC +SGLV E
Sbjct: 347 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKE 406

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G + ++ ++ ++ + P  +H+ C+VD+LGR+G L +AY+FI ++PI+P   VWGA+LSAC
Sbjct: 407 GWELFH-LMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSAC 465

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
             H   ++G+  AE LF L+P N G+Y+ LSN+Y +   W
Sbjct: 466 KIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLW 505



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 200/441 (45%), Gaps = 19/441 (4%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           + +V+Y   +   F E    D++ WNA+I    +   V   +  + +M    +  +  T 
Sbjct: 32  FGDVNYAHKA---FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTF 88

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC 136
           L ++ A    +    G+ +H  + K G  ++  + N  V+MYAK G ++ +   F  +H 
Sbjct: 89  LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 148

Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
              VSW +I+SG + N  P + L  F+EM     + D ++L S + A   + +L  GK I
Sbjct: 149 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 208

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H L  KLG E  P + +  SL +MY++ G +E A   F  M   +++ WNA+I G+A NG
Sbjct: 209 HGLVTKLGLEFEPDIVI--SLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
             EEA  L  EM + +++  D  T+ + +   A    L   R + GY  +     D  + 
Sbjct: 267 YGEEAIKLFREM-ITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 325

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
             L+D Y+K  S+  A  +F+ +A   D+V W+ MI G            L+ EM     
Sbjct: 326 TGLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
             +  T + +L +C +   ++ G  +       G   +    + ++ +    G L  A+ 
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 444

Query: 425 LLQRISHNSDTSCWNIVIVAC 445
            +  +      S W  ++ AC
Sbjct: 445 FIMSMPIKPGVSVWGALLSAC 465



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 211/464 (45%), Gaps = 23/464 (4%)

Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           F+N     GD+N +   F  +   D + WN I+ G    N  +  +  + +M  S    +
Sbjct: 25  FINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPN 84

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             +    + A         GK IH    K G+  +  V V NSL+SMY++ G I  A   
Sbjct: 85  CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN--VFVQNSLVSMYAKFGQISYARIV 142

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  + VVSW +II G+  NG   EA ++  EM+   +V+PD   +V++++   +   
Sbjct: 143 FDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC-NVKPDWIALVSVMTAYTNVED 201

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L +G+S+HG   +  L ++  ++ SL   Y+K   +  A   FN +   N L+ WN+MIS
Sbjct: 202 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPN-LILWNAMIS 260

Query: 354 G------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           G            LF+EM+    +    T+ + + +     SLE  + +  +  K  + +
Sbjct: 261 GYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD 320

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           +T     L+ MY  CG +  A  +  R++ + D   W+++I+    +GH QEAI  +  M
Sbjct: 321 DTFVNTGLIDMYAKCGSIYLARCVFDRVA-DKDVVLWSVMIMGYGLHGHGQEAICLYNEM 379

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +Q    P+  T + +++AC N  L  EG  L  L     +    +  + ++ + GR   
Sbjct: 380 -KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGY 438

Query: 522 IKSASTVFESC-YNCNLCTWNCMISAFSQNK----AEVRALELF 560
           +  A     S      +  W  ++SA   ++     E+ A +LF
Sbjct: 439 LNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLF 482



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 158/296 (53%), Gaps = 3/296 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++    SL++ Y+       +  +F +  ++ VV+W ++I+  V+N   +  L+ F
Sbjct: 115 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 174

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM +  ++ D   L+ +++A T +  L QG+ +H L  K G+  +  +      MYAK 
Sbjct: 175 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 234

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   + + WN ++SG  +N Y E+ +  FREM     + D++++ SAV
Sbjct: 235 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 294

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            ASA +G L   + +     K  Y D  +V+    LI MY++CG I  A   F  +  KD
Sbjct: 295 LASAQVGSLELARWLDGYISKSEYRDDTFVN--TGLIDMYAKCGSIYLARCVFDRVADKD 352

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           VV W+ +I G+ L+G  +EA  L +EM+    V P+  T + L++ C +S L++EG
Sbjct: 353 VVLWSVMIMGYGLHGHGQEAICLYNEMK-QAGVCPNDGTFIGLLTACKNSGLVKEG 407


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 275/512 (53%), Gaps = 34/512 (6%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L+  + +H   I   L ++  + NSLM+ Y     L+ A+ +F+   P  ++VSW  +IS
Sbjct: 37  LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHH-TPCKNVVSWTILIS 95

Query: 354 GL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
           GL            F+EM     + +  T+ ++LP+  +   +   KS+HC+ ++ GF  
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           N     AL+ MY   G +  A  L + +S  +  S WN ++   + +G  +EAI  F  M
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVS-WNAIVSGYSDHGFSEEAIDLFNLM 214

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +++    D  T++++I A  ++     G  +HG  +++    D  ++ AL+ +Y     
Sbjct: 215 -RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILS 577
           +  A  VF   +  ++  W  M++ FS  +   RA++ F  +      + + I ++ ILS
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           +C+  G L+ G+++H       F  N F+ SA++DMY+NC               K    
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W++MI+  G +G G +AI+LF +M  SG+ P +S+ +S+L ACSH+G+V EGLQ + +M+
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
           +     P  +H+ C++D+LGR+G+L  AY FI N+P QP   V+  +L AC  HG+ K+G
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513

Query: 743 KQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
            ++++ +F++EP + GYY+ LSNMY   G W+
Sbjct: 514 HEISQKIFEMEPNDAGYYVLLSNMYALAGNWE 545



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 246/531 (46%), Gaps = 49/531 (9%)

Query: 81  SALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTV 140
           S L ++  LK  + +H   I +G+  ++ L N  +N Y  CG L  ++  F    C + V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW  ++SG   N+   + +  FREM     + + V++SS + A A LG +   K +H   
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           ++ G+E +  V V  +L+ MYS+ G +  A + F  M+ ++VVSWNAI+ G++ +G  EE
Sbjct: 149 VRGGFEGN--VFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEE 206

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
           A DL + M+  + +  D  T+++LI        L+ G  +HG+ IR     D  +  +LM
Sbjct: 207 AIDLFNLMR-RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS-QFS 367
           D Y   N +  A  +F+ +  + D+ +W  M++G             F +ML + + +  
Sbjct: 266 DIYVSHNCVDDAHRVFSEMF-VKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
              L+ IL SC+   +L+ G+ +H   +K  F+NN    +A++ MY NCG+L  A     
Sbjct: 325 SIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFY 384

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +    D  CWN +I     NG+  +AI  F  M +     PD  T V+V+ AC +  + 
Sbjct: 385 GMG-EKDVVCWNAMIAGNGMNGYGTDAIDLFLQM-KGSGLDPDESTFVSVLYACSHAGMV 442

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
           +EG  +                     M     DI             NL  + C+I   
Sbjct: 443 YEGLQI------------------FYHMVKTSHDIP------------NLQHYACVIDIL 472

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +      A     ++ F+P+     ++L AC   G ++ G +I   +F +
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEM 523



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 230/490 (46%), Gaps = 17/490 (3%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           S SL+ AY        +  +F+ T  K+VV+W  +I+   +N C V  +  F EM     
Sbjct: 59  SNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNF 118

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + ++ T+  ++ A   +  ++  + VHC  ++ G   +  +    V+MY+K G +  +  
Sbjct: 119 KPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQ 178

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + VSWN I+SG   + + E+ +  F  M   G   D  ++ S + AS  +G 
Sbjct: 179 LFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGC 238

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G  IH   I+ GYE+  ++    +L+ +Y     ++ A R F  M  KDV +W  ++
Sbjct: 239 LQVGTGIHGFIIRTGYENDKHIKT--ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLML 296

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF+    ++ A    ++M  +++++ D   ++ ++S C+ S  L++GR VH  AI+   
Sbjct: 297 TGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCF 356

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ + ++++D Y+   +L  A+  F  +    D+V WN+MI+G            LF 
Sbjct: 357 ANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE-KDVVCWNAMIAGNGMNGYGTDAIDLFL 415

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS-NNTIGVNALMHMYINC 416
           +M         ST +++L +C+    +  G  I    +K      N      ++ +    
Sbjct: 416 QMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRA 475

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLV 475
           G L AA+S +  +    D   ++ ++ AC  +G+ +   +  + + + + N +   V L 
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLS 535

Query: 476 NVISACGNLE 485
           N+ +  GN E
Sbjct: 536 NMYALAGNWE 545



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 161/306 (52%), Gaps = 4/306 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   T+L+  YS       +  LF     ++VV+WNA+++   ++      +  F
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLF 211

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G+  D  T++ ++ A   + CL+ G  +H   I+ G   D  +    +++Y   
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSA 180
             ++ +   FS M   D  +W  +++G     + ++ + +F +M G    + D++ L   
Sbjct: 272 NCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGI 331

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++ +  G L  G+ +HAL IK  + ++ +V   +++I MY+ CG++E A+R F+GM  K
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVG--SAVIDMYANCGNLEDAKRFFYGMGEK 389

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV WNA+I G  +NG   +A DL  +M+    ++PD +T V+++  C+ + ++ EG  +
Sbjct: 390 DVVCWNAMIAGNGMNGYGTDAIDLFLQMK-GSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 301 HGYAIR 306
             + ++
Sbjct: 449 FYHMVK 454



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 32/205 (15%)

Query: 557 LELFRHLEFEPNEI------SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
              +RHL   P +       S  SIL     L  L   +QIH  +   G   N+F+S++L
Sbjct: 6   FNFYRHLSSNPTQRLCPLAQSHASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSL 62

Query: 611 LDMY---------------SNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           ++ Y               + CK+  +W+ +IS    +    EAI++F EM     +P  
Sbjct: 63  MNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNA 122

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLE---EYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
            ++ S+L A ++ GL+      +   +    E +V  ET     +VDM  + G +  A +
Sbjct: 123 VTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET----ALVDMYSKFGCMGVARQ 178

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHG 737
             +++  +     W A++S  S HG
Sbjct: 179 LFESMS-ERNVVSWNAIVSGYSDHG 202


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 181/606 (29%), Positives = 295/606 (48%), Gaps = 44/606 (7%)

Query: 215 NSLISMYSQCGD---IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           N L++ YS  G    + AA R F  +   D VSWN+++      G   +A+ LL +M   
Sbjct: 30  NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMH-A 88

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           R +      + + +   A +     G  +  +A++  L  ++   ++L+D Y+K   LS 
Sbjct: 89  RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F+ + P+ + VSWN++I+G            LF EM  +      +T  A+L +  
Sbjct: 149 ARRVFDGM-PVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVE 207

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
            P      + +H    K G +   + +NA +  Y  CG    +  +   I  + D   WN
Sbjct: 208 GPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGI-QSRDLISWN 266

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA-FEGKSLHGLAL 498
            ++ A   +G   EA++ F  M ++    PD  +  +V+S C        +G+S+H L +
Sbjct: 267 SMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVV 326

Query: 499 KSLMGLD--TRVQNALITMYGRCRD---IKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           K  +GL+  T V NA+I MY R  +   ++ A   F+S    +  +WN M++ +S +   
Sbjct: 327 K--IGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLS 384

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL  FR +  E    +E ++ + L +C+ L VLR G+Q+H  V   GF  N F+SS+L
Sbjct: 385 SDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSL 444

Query: 611 LDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           + MYS C                S+  W+SM+  Y  HG+     +LF EM +  +    
Sbjct: 445 IFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDH 504

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            + ++LL+A SH GLVDEG +  N+M   Y +    EH+ C VD+ GR+G+L +A E I+
Sbjct: 505 VTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIE 564

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           ++P QP   VW  +L AC  HG+ ++   VA  LF  EP     Y+ LS+MY   G W D
Sbjct: 565 SMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSD 624

Query: 776 AVEIGK 781
              + K
Sbjct: 625 RATVQK 630



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/609 (23%), Positives = 263/609 (43%), Gaps = 55/609 (9%)

Query: 8   PTS-TSLLTAYSNV---SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           PT    LLTAYS     S   ++  +F E    D V+WN+++ A V             +
Sbjct: 26  PTPWNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKD 85

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   G+   +  L   + +       + G  +   ++K+G++ +    +  +++YAKCG 
Sbjct: 86  MHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGR 145

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L+ +   F GM   +TVSWN +++G   +  P + +  F EM       D+ + ++ +A 
Sbjct: 146 LSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLAT 205

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
                  S  + +H  G    Y  +  + V N+ I+ YSQCG    + R F G+  +D++
Sbjct: 206 VEGPSWYSLMQQLH--GKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLI 263

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLREGRSVHG 302
           SWN+++  +A +G  +EA      M     V+PD+ +  +++S+C++     R+GRS+H 
Sbjct: 264 SWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHS 323

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNS---LSKAELLFNAIAPMNDLVSWNSMISG----- 354
             ++  L     + N+++  Y++      +  A   F+++    D VSWNSM++G     
Sbjct: 324 LVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLV-FKDAVSWNSMLTGYSHHG 382

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                   F+ M           L A L SC+    L  G+ +H   ++ GFS+N    +
Sbjct: 383 LSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSS 442

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           +L+ MY  CG +  A    +     S    WN ++    Q+G  Q     F  M   +  
Sbjct: 443 SLIFMYSKCGMVGDARKSFEEADKGSSVP-WNSMMFGYAQHGQAQTVTDLFSEMLDHK-V 500

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             D VT V +++A  +  L  EG  +       L  ++TR +  L               
Sbjct: 501 PLDHVTFVALLTAYSHGGLVDEGSEI-------LNSMETRYKIPL--------------- 538

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRH 587
                    +  + C +  + +     +A EL   + F+P+ +  +++L AC   G +  
Sbjct: 539 --------RMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMEL 590

Query: 588 GKQIHGHVF 596
              +  H+F
Sbjct: 591 ASDVASHLF 599



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 213/475 (44%), Gaps = 30/475 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + ++ ++++LL  Y+       +  +F     ++ V+WNA+I    E+R     +  F
Sbjct: 125 GLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELF 184

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +  D  T   +++ +   +     + +H    K G      + N  +  Y++C
Sbjct: 185 LEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQC 244

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSA 180
           G    S   F G+   D +SWN+++    ++   ++ + +F R M  SG Q D  S +S 
Sbjct: 245 GAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSV 304

Query: 181 VAASACLG-ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD---IEAAERAFWG 236
           V+  +  G +   G+ IH+L +K+G E   +  V N++I+MY++  +   +E A + F  
Sbjct: 305 VSVCSEHGCDDRQGRSIHSLVVKIGLEGVTH--VCNAMIAMYTRFTENCMMEDAYKCFDS 362

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD VSWN+++ G++ +G   +A      M+   +V  D   +   +  C+D  +LR 
Sbjct: 363 LVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMR-AENVSTDEFALSAALRSCSDLAVLRL 421

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           GR VH   I+     +  + +SL+  YSK   +  A   F   A     V WNSM+ G  
Sbjct: 422 GRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEE-ADKGSSVPWNSMMFGYA 480

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGF 399
                     LF EML         T +A+L + +    ++ G  I       +++ L  
Sbjct: 481 QHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRM 540

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
            +   GV+    +Y   G L  A  L++ +    D   W  ++ AC  +G+ + A
Sbjct: 541 EHYACGVD----LYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELA 591


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 306/622 (49%), Gaps = 36/622 (5%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+ + GK +H   IK G  +   +   N L++ Y +   +  A + F  M  ++ VS+  
Sbjct: 58  GDCATGKYLHCEIIKKG--NCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVT 115

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G++   +F EA  L   +Q     E +     T++ L   +   + G SVH    + 
Sbjct: 116 LIQGYSQCLRFSEAIGLFSRLQ-GEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKL 174

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYL 362
               D  +  +L+D YS       A  +F+AI    D+VSW  M++       F+E L L
Sbjct: 175 GFDSDAFVGTALIDCYSVCGYAECARQVFDAIE-YKDMVSWTGMVACYVENECFEESLKL 233

Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            S+           T  ++L +C   E    GK++H    K  +         L+ +YI 
Sbjct: 234 FSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK 293

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
            GD+  A  + + +  + D   W+ +I    Q+   +EAI+ F  M ++    P+  TL 
Sbjct: 294 SGDVDDALQVFEEMPKD-DVIPWSFMIARYAQSEQSEEAIEMFCRM-RRGLVLPNQFTLA 351

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
           +++ AC +L     G  +H   +K  + ++  V NAL+ MY +C  ++++  +F    NC
Sbjct: 352 SLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNC 411

Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
              +WN +I  + Q     +AL LF+ +   + +  E++  S+L AC  +  L  G QIH
Sbjct: 412 TDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIH 471

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
                  + +N+ + +AL+DMY+ C                   +W++MIS Y  HG   
Sbjct: 472 SLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYG 531

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           EA++ F  M  +  +P K + + +LSACS++GL+D G  Y+ +M+EEYD+ P  EH+ C+
Sbjct: 532 EALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCM 591

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           V +LGRSG L +A + +  +P +P   VW A+LSAC  H D ++G+  A+ + ++EPE+ 
Sbjct: 592 VWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDE 651

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
             ++ LSN+Y    RW +   I
Sbjct: 652 ATHVLLSNIYANARRWGNVASI 673



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 202/711 (28%), Positives = 326/711 (45%), Gaps = 73/711 (10%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG--- 148
           G+ +HC  IK G   D    N+ +N Y K   L  +   F  M   +TVS+ T++ G   
Sbjct: 63  GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
           CL   + E   L+ R  G  G + +    S+ +           G  +HA   KLG++  
Sbjct: 123 CLR--FSEAIGLFSRLQG-EGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSD 179

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V    +LI  YS CG  E A + F  +  KD+VSW  ++  +  N  FEE+  L   M
Sbjct: 180 AFVG--TALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRM 237

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           +++   +P+  T  +++  C    +   G++VHG A +     +L +   L+D Y KS  
Sbjct: 238 RIV-GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGD 296

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM---LYLCSQFSFSTLLA 373
           +  A  +F  + P +D++ W+ MI+             +F  M   L L +QF   TL +
Sbjct: 297 VDDALQVFEEM-PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQF---TLAS 352

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L +C S   L+ G  IHC  +K+G   N    NALM MY  CG +  +  L     + +
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCT 412

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D S WN VIV   Q G+ ++A+  FK M + Q    + VT  +V+ AC  +     G  +
Sbjct: 413 DVS-WNTVIVGYVQAGNGEKALILFKDMLECQVQGTE-VTYSSVLRACAGIAALEPGSQI 470

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           H L++K++   +T V NALI MY +C +IK A  VF+     +  +WN MIS +S +   
Sbjct: 471 HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLY 530

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL+ F  +   E +P++++ V ILSAC+  G+L  G+                   ++
Sbjct: 531 GEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYF---------------KSM 575

Query: 611 LDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSACSH 667
           ++ Y        ++ M+   G  G   +A +L HE+      P + SV+   +LLSAC  
Sbjct: 576 VEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEI------PFEPSVMVWRALLSACVI 629

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLG---RSGKLQEAYEFIKNLPIQPKP 723
              V+ G      +LE   + PE E  HV + ++     R G +      +K   I+ +P
Sbjct: 630 HNDVELGRISAQRVLE---IEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEP 686

Query: 724 GVWGAMLSACSH--------HGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           G+         H        H DTK+   + E L  ++  N GY    S++
Sbjct: 687 GLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWL-NMKARNEGYVPDFSSV 736



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 266/580 (45%), Gaps = 21/580 (3%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y        +  LF E  +++ V++  +I    +       +  F  +  EG   +
Sbjct: 85  LLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELN 144

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
                 ++  L      K G  VH    K G  +D+ +    ++ Y+ CG    +   F 
Sbjct: 145 PFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFD 204

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            +   D VSW  +++  + N   E+ L  F  M   G + +N + +S + A   L   + 
Sbjct: 205 AIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNV 264

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H    K  Y +  +V V   LI +Y + GD++ A + F  M   DV+ W+ +I  +
Sbjct: 265 GKAVHGCAFKTSYLEELFVGV--ELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARY 322

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           A + + EEA ++   M+    V P+  T+ +L+  CA  + L+ G  +H + ++  L  +
Sbjct: 323 AQSEQSEEAIEMFCRMR-RGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMN 381

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           + + N+LMD Y+K   +  +  LF+      D VSWN++I G            LFK+ML
Sbjct: 382 VFVSNALMDMYAKCGRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEKALILFKDML 440

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
               Q +  T  ++L +C    +LE G  IH   +K  +  NT+  NAL+ MY  CG++ 
Sbjct: 441 ECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIK 500

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +  +   S WN +I   + +G + EA+KTF+SM + +   PD VT V ++SA
Sbjct: 501 DARLVFDMLREHDQVS-WNAMISGYSVHGLYGEALKTFESMLETE-CKPDKVTFVGILSA 558

Query: 481 CGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYGRCRDI-KSASTVFESCYNCNLC 538
           C N  L   G++    +  +  +         ++ + GR   + K+A  V E  +  ++ 
Sbjct: 559 CSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVM 618

Query: 539 TWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
            W  ++SA    N  E+  +   R LE EP + +   +LS
Sbjct: 619 VWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLS 658



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 192/401 (47%), Gaps = 18/401 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +     T+L+  YS   Y E +  +F     KD+V+W  M+   VEN C    L  F
Sbjct: 175 GFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLF 234

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G + ++ T   ++ A   +     G+ VH  + K   + +  +    +++Y K 
Sbjct: 235 SRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKS 294

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD++ +   F  M   D + W+ +++    +   E+ +  F  M       +  +L+S +
Sbjct: 295 GDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLL 354

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
            A A L +L  G  IH   +K+G + + +VS  N+L+ MY++CG +E + + F     C 
Sbjct: 355 QACASLVDLQLGNQIHCHVVKVGLDMNVFVS--NALMDMYAKCGRMENSLQLFSESPNCT 412

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSWN +I G+   G  E+A  L  +M L   V+    T  +++  CA    L  G  +
Sbjct: 413 D-VSWNTVIVGYVQAGNGEKALILFKDM-LECQVQGTEVTYSSVLRACAGIAALEPGSQI 470

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL----- 355
           H  +++ +   + ++ N+L+D Y+K  ++  A L+F+ +   +D VSWN+MISG      
Sbjct: 471 HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE-HDQVSWNAMISGYSVHGL 529

Query: 356 -------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
                  F+ ML    +    T + IL +C++   L+ G++
Sbjct: 530 YGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQA 570



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 173/358 (48%), Gaps = 14/358 (3%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +L  L     L+  Y      + +L +F E    DV+ W+ MI    ++      +  F 
Sbjct: 277 YLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFC 336

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M    +  +  TL  ++ A   +  L+ G  +HC  +K G+  +  + N  ++MYAKCG
Sbjct: 337 RMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCG 396

Query: 123 DLNSSECTFS-GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            + +S   FS   +C D VSWNT++ G +     EK L+ F++M     Q   V+ SS +
Sbjct: 397 RMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVL 455

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A +  L  G  IH+L +K  Y+ +  V   N+LI MY++CG+I+ A   F  +   D
Sbjct: 456 RACAGIAALEPGSQIHSLSVKTIYDKNTVVG--NALIDMYAKCGNIKDARLVFDMLREHD 513

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-- 299
            VSWNA+I G++++G + EA      M L    +PD  T V ++S C+++ LL  G++  
Sbjct: 514 QVSWNAMISGYSVHGLYGEALKTFESM-LETECKPDKVTFVGILSACSNAGLLDRGQAYF 572

Query: 300 ---VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
              V  Y I     +   M+  L     +S  L KA  L + I     ++ W +++S 
Sbjct: 573 KSMVEEYDIEPCAEHYTCMVWLL----GRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/520 (30%), Positives = 271/520 (52%), Gaps = 50/520 (9%)

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           VH + I+     +  +M+ L++ Y+K   +  A  +F+ + P  ++V W ++++G     
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNL-PRRNVVVWTTLMTGYVQNS 60

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  +F +ML   S  S  TL   L +C+S ES+  GK  H + +K   S+++   N
Sbjct: 61  QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120

Query: 408 ALMHMYINCGDL---VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           AL  +Y   G L   V AF    R +   D   W  +I AC  NG     ++ F  M  +
Sbjct: 121 ALCSLYSKFGSLDSSVKAF----RETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFE 176

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
            N  P+  TL +V+S C  ++ +  G  +H L+ K     + R+ N+L+ +Y +C  I  
Sbjct: 177 -NVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDE 235

Query: 525 ASTVFESCYNCNLCTWNCMISA-----------FSQNKAEVRALELFRHLEF---EPNEI 570
           A  +F      NL TWN MI+            FS  +    AL ++  L     +P+  
Sbjct: 236 AKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLF 295

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           ++ SIL+ C++L  L  G+QIH      GF  +  + +AL+DMY  C             
Sbjct: 296 TLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDM 355

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             ++  +W+SMI+++  HG+   A++LF +M  +G RP + + + +L+ACSH+G+VDE L
Sbjct: 356 STRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEAL 415

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           +Y+  M +EY ++P  +H+ C+VDM  R G+L EA++ IK + ++P   +W  +++ C +
Sbjct: 416 EYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRN 475

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           HG+ ++G   AE L KL+P +   Y+ L NMY++  RW+D
Sbjct: 476 HGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWED 515



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 168/652 (25%), Positives = 292/652 (44%), Gaps = 95/652 (14%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           +VH   IK G   +  + +  VN+YAKCG + ++   F  +   + V W T+M+G + N+
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
            PE  +  F +M  SG    N +LS A+ A + L  ++ GK  HA  IK  Y  S   S+
Sbjct: 61  QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIK--YRISHDSSI 118

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+L S+YS+ G ++++ +AF     KDV+SW  II     NG+      L  EM L  +
Sbjct: 119 GNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEM-LFEN 177

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSK 331
           VEP+  T+ +++SLC+       G  VH  + +  LG++  L + NSL+  Y K   + +
Sbjct: 178 VEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTK--LGHESNLRITNSLVYLYLKCGCIDE 235

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS-----------------------F 368
           A+ LFN +   N L++WN+MI+G  + M      FS                        
Sbjct: 236 AKNLFNRMEYKN-LITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDL 294

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
            TL +IL  C+   +LE G+ IH   +K GF ++ +   AL+ MY  CG +  A      
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +S  +  S W  +I +  ++G  Q A++ F+ M +     P+ +T V V++AC +  +  
Sbjct: 355 MSTRTLIS-WTSMITSFARHGQSQHALQLFEDM-RLAGFRPNQITFVGVLAACSHAGMVD 412

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           E      L    +M  + +++  ++  YG                        C++  F 
Sbjct: 413 E-----ALEYFEIMQKEYKIK-PVMDHYG------------------------CLVDMFV 442

Query: 549 QNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
           +      A ++ + ++ EPNE   + +++ C       HG +       LGF    + + 
Sbjct: 443 RLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRN-----HGNE------ELGF----YAAE 487

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
            LL +    +S   +  +++ Y    + WE + +         R  K   +  L   S  
Sbjct: 488 QLLKL--KPRSTETYVVLLNMY-ISAERWEDVSMVR-------RLMKEEKVGKLKDWSRI 537

Query: 669 GLVDEGLQYY-NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
            +  E   +  NN L  ++     E H  + D++ R+  L   YE ++N+ +
Sbjct: 538 SIKGEVHSFKTNNRLHNHN----AELHTLLNDLVDRAKSL--GYEQLENMEV 583



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 231/470 (49%), Gaps = 44/470 (9%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+      ++  +F     ++VV W  ++T  V+N    + +  FG+M+E G    
Sbjct: 21  LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS 80

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
           + TL I ++A + +  +  G+  H   IK  +  DSS+ N   ++Y+K G L+SS   F 
Sbjct: 81  NFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR 140

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
                D +SW TI+S C  N      L  F EM +   + ++ +L+S ++  + +     
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G  +H+L  KLG+E +  + +TNSL+ +Y +CG I+ A+  F  M  K++++WNA+I G 
Sbjct: 201 GMQVHSLSTKLGHESN--LRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGH 258

Query: 253 ALNGKFEEAFDLLHE---------------MQLMRS-VEPDIATVVTLISLCADSLLLRE 296
           A      +A DL  +               ++L RS  +PD+ T+ +++++C+    L +
Sbjct: 259 A------QAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQ 312

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           G  +H   I+     D+++  +L+D Y K  S+ +A   F  ++    L+SW SMI+   
Sbjct: 313 GEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMST-RTLISWTSMITSFA 371

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSP----ESLEFGKSIHCWQLKLGFS 400
                     LF++M     + +  T + +L +C+      E+LE+ + I   + K+   
Sbjct: 372 RHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFE-IMQKEYKIKPV 430

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
            +  G   L+ M++  G L  AF +++R+    +   W ++I  C  +G+
Sbjct: 431 MDHYG--CLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 155/297 (52%), Gaps = 14/297 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L + YS     +SS+  F ET  KDV++W  +I+AC +N    MGL  F EM+ E +  
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  TL  ++S  + +     G  VH LS K G  ++  + N  V +Y KCG ++ ++  F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240

Query: 132 SGMHCADTVSWNTIMSG------CLHNNYPEK-----CLLYFREMGWSGEQADNVSLSSA 180
           + M   + ++WN +++G         +N+  +      L  + ++  SG + D  +LSS 
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   + L  L  G+ IHA  IK G+     V V  +L+ MY +CG IE A +AF  M+ +
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSD--VVVGTALVDMYDKCGSIERARKAFLDMSTR 358

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            ++SW ++I  FA +G+ + A  L  +M+L     P+  T V +++ C+ + ++ E 
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLA-GFRPNQITFVGVLAACSHAGMVDEA 414



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 132/331 (39%), Gaps = 67/331 (20%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE----------- 50
           G  ++L  + SL+  Y      + +  LF     K+++TWNAMI    +           
Sbjct: 212 GHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSA 271

Query: 51  NRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
            +     L  + ++   G + D  TL  I++  +++  L+QG  +H  +IK+G ++D  +
Sbjct: 272 QQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVV 331

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE 170
               V+MY KCG +  +   F  M     +SW ++++    +   +  L  F +M  +G 
Sbjct: 332 GTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGF 391

Query: 171 QADNVSLSSAVAASACLG----ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
           + + ++    +AA +  G     L Y +++        Y+  P +               
Sbjct: 392 RPNQITFVGVLAACSHAGMVDEALEYFEIMQK-----EYKIKPVMD-------------- 432

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
                             +  ++D F   G+ +EAFD++  M     VEP+    + LI+
Sbjct: 433 -----------------HYGCLVDMFVRLGRLDEAFDVIKRMD----VEPNEFIWLLLIA 471

Query: 287 LC------------ADSLLLREGRSVHGYAI 305
            C            A+ LL  + RS   Y +
Sbjct: 472 GCRNHGNEELGFYAAEQLLKLKPRSTETYVV 502


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 183/618 (29%), Positives = 296/618 (47%), Gaps = 105/618 (16%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N  IS Y + G  E+A   F GM  +  V++NA+I G+  N KF+ A  +  +M      
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------ 117

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD                                  DL+  N ++  Y K+ +LS A  
Sbjct: 118 -PD---------------------------------RDLISWNVMLSGYVKNGNLSAARA 143

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL-AILPSCNSP 381
           LFN + P  D+VSWN+M+SG            +F +ML + ++ S++ LL A + +    
Sbjct: 144 LFNQM-PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML-VKNEISWNGLLSAYVQNGRIE 201

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++     S   W++        +  N LM  Y+    L  A SL  R+    D   WNI+
Sbjct: 202 DARRLFDSKMDWEI--------VSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIM 252

Query: 442 IVACTQNGHFQEAIKTFKSMTQQ-------------QNASPDSVTLV-------NVISAC 481
           I    QNG   EA + F+ +  +             QN   D  T +       N +S  
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312

Query: 482 GNLELAFEGKSLHGLA--LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
             +    + + +         +   +T   N ++T Y +C +I  A  +F+     +  +
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  MIS ++Q+     AL LF  ++ +    N  ++   LS+C ++  L  GKQ+HG + 
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             GFQ      +ALL MY  C               K   +W++MI+ Y  HG G EA+ 
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF  M  + I+P   +++ +LSACSH+GLVD+G++Y+N+M + Y +    +H+ C++D+L
Sbjct: 493 LFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLL 551

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G+L EA   +K++P  P    WGA+L A   HGDT++G++ AE +F++EP+N G Y+
Sbjct: 552 GRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYV 611

Query: 762 SLSNMYVALGRWKDAVEI 779
            LSN+Y A GRW++  E+
Sbjct: 612 LLSNLYAASGRWREVREM 629



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 260/618 (42%), Gaps = 93/618 (15%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDST-TLLIIVSALTQMNCLKQGR 93
           + D+V WN  I+A +        L  F      G+R  ST T   ++S     N     R
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMISGYLSNNKFDCAR 111

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            V        +I+     NV ++ Y K G+L+++   F+ M   D VSWN ++SG   N 
Sbjct: 112 KVFEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167

Query: 154 YPEKCLLYFREM------GWSG-----------EQADNV---SLSSAVAASACL--GELS 191
           + E+    F +M       W+G           E A  +    +   + +  CL  G + 
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227

Query: 192 YGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             ++  A  +   ++  P       N +I+ Y+Q G +  A R F  +  +DV +W A++
Sbjct: 228 KKRLDDARSL---FDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF  NG  +EA  +  EM      E +  +   +I+    S  + + R +      R  
Sbjct: 285 SGFVQNGMLDEATRIFEEMP-----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-- 337

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             +    N+++  Y++  ++ +A++LF+ + P  D +SW +MISG            LF 
Sbjct: 338 --NTSSWNTMVTGYAQCGNIDQAKILFDEM-PQRDCISWAAMISGYAQSGQSEEALHLFI 394

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M       + S L   L SC    +LE GK +H   +K GF    I  NAL+ MY  CG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  AF + + I+   D   WN +I    ++G  +EA+  F+SM  +    PD VTLV V
Sbjct: 455 SIEEAFDVFEDITEK-DIVSWNTMIAGYARHGFGKEALALFESM--KMTIKPDDVTLVGV 511

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC          S  GL  K +   ++  QN  IT                     N 
Sbjct: 512 LSAC----------SHTGLVDKGMEYFNSMYQNYGIT--------------------ANA 541

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             + CMI    +      AL L + + F P+  +  ++L A    G    G++    VF 
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFE 601

Query: 598 LGFQENSFISSALLDMYS 615
           +   +NS +   L ++Y+
Sbjct: 602 ME-PDNSGMYVLLSNLYA 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 233/528 (44%), Gaps = 72/528 (13%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-------- 64
           +L+ Y       ++ ALF +   KDVV+WNAM++   +N  V      F +M        
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISW 187

Query: 65  ------------VEEGIR-FDSTTLLIIVSALTQMNCL-----KQGRVVHCLSIKAGM-I 105
                       +E+  R FDS     IVS     NCL     ++ R+    S+   M +
Sbjct: 188 NGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPV 243

Query: 106 ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM 165
            D    N+ +  YA+ G L+ +   F  +   D  +W  ++SG + N   ++    F EM
Sbjct: 244 RDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 166 GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQ 223
                + + VS ++ +A      ++   + +        ++  P  + +  N++++ Y+Q
Sbjct: 304 ----PEKNEVSWNAMIAGYVQSQQIEKAREL--------FDQMPSRNTSSWNTMVTGYAQ 351

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
           CG+I+ A+  F  M  +D +SW A+I G+A +G+ EEA  L  +M+    +  + + +  
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALAC 410

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
            +S CA+   L  G+ +HG  ++       +  N+L+  Y K  S+ +A  +F  I    
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-K 469

Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFS------TLLAILPSCNS----PESLEFGK 388
           D+VSWN+MI+     G  KE L L      +      TL+ +L +C+      + +E+  
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFN 529

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           S++      G + N      ++ +    G L  A +L++ +    D + W  ++ A   +
Sbjct: 530 SMY---QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 449 GHFQEAIKTFKSMTQQQNASPDS----VTLVNVISACGNLELAFEGKS 492
           G  +   K  + + + +   PD+    V L N+ +A G      E +S
Sbjct: 587 GDTELGEKAAEKVFEME---PDNSGMYVLLSNLYAASGRWREVREMRS 631



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 152/302 (50%), Gaps = 17/302 (5%)

Query: 1   RGFLAHLPTSTS-----LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV 55
           R     +P         ++T Y+       +  LF E   +DV  W AM++  V+N  + 
Sbjct: 235 RSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLD 294

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
                F EM E+    +  +   +++   Q   +++ R +           ++S  N  V
Sbjct: 295 EATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKAREL----FDQMPSRNTSSWNTMV 346

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
             YA+CG+++ ++  F  M   D +SW  ++SG   +   E+ L  F +M   G   +  
Sbjct: 347 TGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRS 406

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L+ A+++ A +  L  GK +H   +K G++ + Y++  N+L++MY +CG IE A   F 
Sbjct: 407 ALACALSSCAEIAALELGKQLHGRLVKAGFQ-TGYIA-GNALLAMYGKCGSIEEAFDVFE 464

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +T KD+VSWN +I G+A +G  +EA  L   M++  +++PD  T+V ++S C+ + L+ 
Sbjct: 465 DITEKDIVSWNTMIAGYARHGFGKEALALFESMKM--TIKPDDVTLVGVLSACSHTGLVD 522

Query: 296 EG 297
           +G
Sbjct: 523 KG 524



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 144/325 (44%), Gaps = 22/325 (6%)

Query: 1   RGFLAHLPTSTS-----LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV 55
           R     +P+  +     ++T Y+     + +  LF E   +D ++W AMI+   ++    
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
             LH F +M  +G   + + L   +S+  ++  L+ G+ +H   +KAG        N  +
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            MY KCG +  +   F  +   D VSWNT+++G   + + ++ L  F  M  +  + D+V
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDV 506

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L   ++A +  G +  G + +   +   Y  +        +I +  + G ++ A     
Sbjct: 507 TLVGVLSACSHTGLVDKG-MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565

Query: 236 GMTC-KDVVSWNAIIDGFALNGKF---EEAFDLLHEMQLMRSVEPDIATVVTLIS-LCAD 290
            M    D  +W A++    ++G     E+A + + EM      EPD + +  L+S L A 
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM------EPDNSGMYVLLSNLYAA 619

Query: 291 SLLLREGRSVHG----YAIRRLLGY 311
           S   RE R +        ++++ GY
Sbjct: 620 SGRWREVREMRSKMRDKGVKKVPGY 644



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 43/339 (12%)

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA-CGNLELAFEG 490
           +SD   WN  I A  + G  + A+  F  M ++      +VT   +IS    N +     
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS-----TVTYNAMISGYLSNNKFDCAR 111

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K    +  + L+       N +++ Y +  ++ +A  +F      ++ +WN M+S F+QN
Sbjct: 112 KVFEKMPDRDLISW-----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 551 KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL----------GF 600
                A ++F  +    NEIS   +LSA  Q G +   +++                 G+
Sbjct: 167 GFVEEARKIFDQM-LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 601 QENSFISSA--LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS-- 656
                +  A  L D     +   +W+ MI+ Y  +G   EA  LF E+      P +   
Sbjct: 226 VRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVF 278

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  +++S    +G++DE  + +  M E    + E   +  I   + +S ++++A E    
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPE----KNEVSWNAMIAGYV-QSQQIEKARELFDQ 333

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           +P +     W  M++  +  G+       A++LF   P+
Sbjct: 334 MPSR-NTSSWNTMVTGYAQCGNIDQ----AKILFDEMPQ 367


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 184/603 (30%), Positives = 294/603 (48%), Gaps = 39/603 (6%)

Query: 215 NSLISMYSQCGD--IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           N L++ YS+     + AA R F  +  +D VSWNA++   A +G   EA+ LL  M   +
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMH-AQ 87

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            +  +   + + +   A +     G  +   A++  L  ++   ++L+D Y+K   +  A
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             +F+ + P  + VSWN++I+G            LF EM         +T  ++L +   
Sbjct: 148 RQVFDGM-PERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEG 206

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
           P S      +H   +K G +     +NA +  Y  CG L  +  +   I    D   WN 
Sbjct: 207 P-SCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFEGKSLHGLALK 499
           ++ A T NG   EA+K F  M Q+    PD  +  ++IS+C  +     +G+ +HGL +K
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325

Query: 500 SLMGLDTRVQNALITMYGRCRD---IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
           S +   T V NALI MY R  +   ++ A   F S    +  +WN M++ +SQ+     A
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 557 LELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           L+ FR +       +E +  + L + ++L VL+ GKQIHG V H GF  N F+SS+L+ M
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 614 YSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           YS                  S+  W++MI  Y  HG+      LF+EM          + 
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           + L+++CSH+GLVDEG +  N M  +Y V    EH+ C VD+ GR+G+L +A + I ++P
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            +P   VW  +L AC  HG+ ++   VA  LF  EP     Y+ LS+MY  LG W D   
Sbjct: 566 FEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRAT 625

Query: 779 IGK 781
           + +
Sbjct: 626 VQR 628



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 278/613 (45%), Gaps = 75/613 (12%)

Query: 13  LLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           LLTAYS  S     ++  +F E   +D V+WNA++ A   +            M  +G+ 
Sbjct: 31  LLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGL- 89

Query: 71  FDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
             ++    + SAL      ++   G  +  L++K+G+  +    +  +++YAKCG +  +
Sbjct: 90  --ASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM---GWSGEQADNVSLSSAVAAS 184
              F GM   +TVSWN +++G   +      L  F EM   G + ++A   SL +AV   
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207

Query: 185 AC-LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKDV 242
           +C L    +GK++   G  LG      ++V N+ I+ YSQCG ++ + R F G+   +D+
Sbjct: 208 SCFLMHQLHGKIVK-YGSALG------LTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDL 260

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLREGRSVH 301
           +SWNA++  +  NG  +EA      M     V PD+ +  ++IS C++      +GR +H
Sbjct: 261 ISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIH 320

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNS---LSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
           G  I+  L     + N+L+  Y++ N    +  A   FN++  + D VSWNSM++G  + 
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVSWNSMLTGYSQH 379

Query: 359 MLY---------LCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            L          +CS      +++FS   A L S +    L+ GK IH   +  GF++N 
Sbjct: 380 GLSADALKFFRCMCSENVRTDEYAFS---AALRSSSELAVLQLGKQIHGLVIHSGFASND 436

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              ++L+ MY   G +  A    +    +S    WN +I    Q+G  +     F  M Q
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVP-WNAMIFGYAQHGQAENVDILFNEMLQ 495

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
           ++ A  D +T V +I++C +  L  EG               + + N + T YG      
Sbjct: 496 RK-APLDHITFVGLITSCSHAGLVDEG---------------SEILNTMETKYG------ 533

Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
                        +  + C +  + +     +A +L   + FEP+ +  +++L AC   G
Sbjct: 534 ---------VPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHG 584

Query: 584 VLRHGKQIHGHVF 596
            +     +  H+F
Sbjct: 585 NVELASDVASHLF 597



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 210/472 (44%), Gaps = 24/472 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   ++  +++LL  Y+       +  +F     ++ V+WNA+I    E+  +   L  F
Sbjct: 123 GLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF 182

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EG+  D  T   +++A+   +C    + +H   +K G     ++ N  +  Y++C
Sbjct: 183 LEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQC 241

Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSS 179
           G L  S   F G+    D +SWN ++    HN   ++ + +F R M  SG   D  S +S
Sbjct: 242 GSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTS 301

Query: 180 AVAASACLGELSY-GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD---IEAAERAFW 235
            +++ +  G   + G+VIH L IK   E      V N+LI+MY++  +   +E A + F 
Sbjct: 302 IISSCSEHGHDDHQGRVIHGLVIKSALEG--VTPVCNALIAMYTRYNENCMMEDAYKCFN 359

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  KD VSWN+++ G++ +G   +A      M    +V  D       +   ++  +L+
Sbjct: 360 SLVLKDTVSWNSMLTGYSQHGLSADALKFFRCM-CSENVRTDEYAFSAALRSSSELAVLQ 418

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            G+ +HG  I      +  + +SL+  YSKS  +  A   F   A  +  V WN+MI G 
Sbjct: 419 LGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE-ADKSSSVPWNAMIFGY 477

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNN 402
                      LF EML   +     T + ++ SC+    ++ G  I +  + K G    
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR 537

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
                  + +Y   G L  A  L+  +    D   W  ++ AC  +G+ + A
Sbjct: 538 MEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELA 589



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/255 (20%), Positives = 114/255 (44%), Gaps = 4/255 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++ T Y+     E +   F     KD V+WN+M+T   ++      L FF  M  E +R 
Sbjct: 340 AMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D       + + +++  L+ G+ +H L I +G  ++  + +  + MY+K G ++ +  +F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
                + +V WN ++ G   +   E   + F EM       D+++    + + +  G + 
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVD 519

Query: 192 YG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAII 249
            G ++++ +  K G      +      + +Y + G ++ A++    M  + D + W  ++
Sbjct: 520 EGSEILNTMETKYGV--PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577

Query: 250 DGFALNGKFEEAFDL 264
               ++G  E A D+
Sbjct: 578 GACRIHGNVELASDV 592


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 184/702 (26%), Positives = 319/702 (45%), Gaps = 134/702 (19%)

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACL-GELSYGKVIHALGIKLGYEDSPYVSV 213
           P +C +  R +  S     +++ SS + A  CL   L    ++HA          P+  +
Sbjct: 15  PHQCSVLLRRLAAS----RSLTSSSFLRALRCLHARLLTSALLHA---------PPHPHL 61

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           T  LI +Y+  GD+ AA   F    C   V+  +++  +A  G+   A      +   R 
Sbjct: 62  TLRLIHLYTLSGDLPAAATLFRADPCP--VAATSLVAAYAAAGRLPAAVSFFDAVPQARR 119

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
                                                 D ++ N+++  Y++++  + A 
Sbjct: 120 --------------------------------------DTVLHNAVISAYARASHAAPAV 141

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKEMLYL-------CSQFSFSTL--------------L 372
            +F ++     L   +   + L     +L       C+Q   S L              +
Sbjct: 142 AVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALV 201

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           A+   C + E+    + +    L      + +    ++  Y+  GD+ AA S+ + +   
Sbjct: 202 ALYMKCEALEATRDARKV----LDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVK 257

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   WN +I     +G   EA + F+ M  ++    D  T  +V+SAC N      GKS
Sbjct: 258 FDV-VWNAMISGYVHSGMVVEAFELFRRMVLER-VPLDEFTFTSVLSACANAGFFAHGKS 315

Query: 493 LHG----LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           +HG    L    +      V NAL+T+Y +C +I  A  +F++  + ++ +WN ++S + 
Sbjct: 316 VHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYV 375

Query: 549 QNKAEVRALELFRHLEFE----------------------------------PNEISIVS 574
           ++    +A+E+F  + ++                                  P + +   
Sbjct: 376 ESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAG 435

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--------------- 619
            +SAC +LG L+HGKQ+HGH+  LGF+ ++   +AL+ MY+ C +               
Sbjct: 436 AISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNID 495

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
           + +W++MISA G HG G EA+ELF  M   GI P + S +++L+AC+HSGLVDEG QY+ 
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFE 555

Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
           +M  ++ + P  +H+  ++D+LGR+G++ EA + IK +P +P P +W A+LS C   GD 
Sbjct: 556 SMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDM 615

Query: 740 KMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           ++G   A+ LFK+ P++ G YI LSN Y A GRW DA  + K
Sbjct: 616 ELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRK 657



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 180/386 (46%), Gaps = 47/386 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T T+++  Y       ++ ++F E   K  V WNAMI+  V +  VV     F  MV E 
Sbjct: 230 TWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLER 289

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVH--CLSIKAGMIADSSLC--NVFVNMYAKCGDL 124
           +  D  T   ++SA         G+ VH     ++   + +++L   N  V +Y+KCG++
Sbjct: 290 VPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNI 349

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-------------- 170
             +   F  M   D VSWNTI+SG + ++  +K +  F EM +  E              
Sbjct: 350 AVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGG 409

Query: 171 ------------QADNV-----SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
                       +A++V     + + A++A   LG L +GK +H   ++LG+E S   S 
Sbjct: 410 FSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN--SA 467

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
            N+LI+MY++CG ++ A   F  M   D VSWNA+I     +G   EA +L   M +   
Sbjct: 468 GNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRM-VAEG 526

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR----LLGYDLLMMNSLMDFYSKSNSL 329
           + PD  + +T+++ C  S L+ EG   +  +++R    + G D      L+D   ++  +
Sbjct: 527 IYPDRISFLTVLTACNHSGLVDEGFQ-YFESMKRDFGIIPGED--HYTRLIDLLGRAGRI 583

Query: 330 SKAELLFNAIAPMNDLVS-WNSMISG 354
            +A  L   + P     S W +++SG
Sbjct: 584 GEARDLIKTM-PFEPTPSIWEAILSG 608



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 130/565 (23%), Positives = 229/565 (40%), Gaps = 96/565 (16%)

Query: 9   TSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
            +TSL+ AY+      ++++ F       +D V  NA+I+A          +  F  ++ 
Sbjct: 90  AATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 67  EG-IRFDSTTLLIIVSALTQMN--CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC-- 121
            G +R D  +   ++SA   +    ++    + C  +K+G     S+ N  V +Y KC  
Sbjct: 150 SGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEA 209

Query: 122 --------------------------------GDLNSSECTFSGMHCADTVSWNTIMSGC 149
                                           GD+ ++   F  +     V WN ++SG 
Sbjct: 210 LEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGY 269

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           +H+    +    FR M       D  + +S ++A A  G  ++GK +H    +L     P
Sbjct: 270 VHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 210 --YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
              + V N+L+++YS+CG+I  A R F  M  KDVVSWN I+ G+  +   ++A ++  E
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 268 MQL----------------------------MRS--VEPDIATVVTLISLCADSLLLREG 297
           M                              MR+  V+P   T    IS C +   L+ G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449

Query: 298 RSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           + +HG+ ++  LG++      N+L+  Y++  ++ +A L+F  + P  D VSWN+MIS  
Sbjct: 450 KQLHGHLVQ--LGFEGSNSAGNALITMYARCGAVKEANLMF-LVMPNIDSVSWNAMISAL 506

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNN 402
                      LF  M+         + L +L +CN    ++ G +     +   G    
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPG 566

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ----EAIKTF 458
                 L+ +    G +  A  L++ +      S W  ++  C  +G  +     A + F
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626

Query: 459 KSMTQQQNASPDSVTLVNVISACGN 483
           K MT Q + +   + L N  SA G 
Sbjct: 627 K-MTPQHDGT--YILLSNTYSAAGR 648



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 215/491 (43%), Gaps = 97/491 (19%)

Query: 93  RVVHCLSIKAGMIADSSL-----CNV----FVNMYAKCGDLNSSECTFSGMHCA--DTVS 141
           R++H  ++   + A ++L     C V     V  YA  G L ++   F  +  A  DTV 
Sbjct: 64  RLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVL 123

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIHALG 200
            N ++S     ++    +  FR +  SG  + D+ S ++ ++A+  L  +S         
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQC 183

Query: 201 IKLGYEDSPYVSVTNSLISMYSQCGDIEA---AERAFWGMTCKDVVSWNAIIDGFALNG- 256
             L       +SV+N+L+++Y +C  +EA   A +    M  KD ++W  ++ G+   G 
Sbjct: 184 SVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGD 243

Query: 257 -------------KFE-----------------EAFDLLHEMQLMRSVEPDIATVVTLIS 286
                        KF+                 EAF+L   M L R V  D  T  +++S
Sbjct: 244 VGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLER-VPLDEFTFTSVLS 302

Query: 287 LCADSLLLREGRSVHGYAIRRLLGY----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
            CA++     G+SVHG   R    +     L + N+L+  YSK  +++ A  +F+ +   
Sbjct: 303 ACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMK-S 361

Query: 343 NDLVSWNSMISG------------LFKEMLY--------LCSQF---SFS---------- 369
            D+VSWN+++SG            +F+EM Y        + S +    FS          
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421

Query: 370 ----------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     T    + +C    SL+ GK +H   ++LGF  +    NAL+ MY  CG +
Sbjct: 422 RAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAV 481

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A +L+  +  N D+  WN +I A  Q+GH +EA++ F  M   +   PD ++ + V++
Sbjct: 482 KEA-NLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMV-AEGIYPDRISFLTVLT 539

Query: 480 ACGNLELAFEG 490
           AC +  L  EG
Sbjct: 540 ACNHSGLVDEG 550



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 36/299 (12%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV---------- 54
           A LP + +L+T YS       +  +F    +KDVV+WN +++  VE+ C+          
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 55  ---------VM------------GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
                    VM             L  F  M  E ++    T    +SA  ++  LK G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H   ++ G    +S  N  + MYA+CG +  +   F  M   D+VSWN ++S    + 
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           +  + L  F  M   G   D +S  + + A    G +  G   +   +K  +   P    
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEG-FQYFESMKRDFGIIPGEDH 569

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIIDGFALNGKFE---EAFDLLHEM 268
              LI +  + G I  A      M  +   S W AI+ G   +G  E    A D L +M
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKM 628



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 2/150 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L+T Y+     + +  +F    N D V+WNAMI+A  ++      L  F
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELF 519

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MV EGI  D  + L +++A      + +G +    +    G+I         +++  +
Sbjct: 520 DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGR 579

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGC 149
            G +  +      M    T S W  I+SGC
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGC 609


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/469 (32%), Positives = 253/469 (53%), Gaps = 33/469 (7%)

Query: 341 PMNDLVSWNSMISG-----LFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGK 388
           P   +  WN++I G      F + + + S+   S       TL  +L +C+    LE GK
Sbjct: 130 PEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGK 189

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +H    +LGF ++    N L+ +Y  CG +  A  + + +   +  S W  +I    QN
Sbjct: 190 RVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVS-WTSMISGYGQN 248

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G   EA++ F  M +Q+N  PD + LV+V+ A  ++E   +GKS+HG  +K  +  +  +
Sbjct: 249 GLPMEALRIFGQM-RQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL 307

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EF 565
             +L  MY +C  +  A + F+     N+  WN MIS +++N     A+ LF+ +     
Sbjct: 308 LISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNI 367

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------- 617
             + I++ S + AC Q+G L   K +  ++    ++ + F+++AL+DM++ C        
Sbjct: 368 RTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLARE 427

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K    WS+MI  YG HG+G +AI+LF+ M  +G+ P   + + LL+AC+HSGL
Sbjct: 428 VFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGL 487

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V+EG + +++M + Y +    +H+ C+VD+LGRSG L EAY+FI  +PI+P   VWGA+L
Sbjct: 488 VEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            AC  +    +G+  AE LF L+P N G+Y+ LSN+Y +   W    ++
Sbjct: 547 GACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKV 595



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 214/446 (47%), Gaps = 24/446 (5%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H   + +G++    L   FVN     G++  +   F          WN I+ G   +N+
Sbjct: 90  IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNF 149

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               +  +  M  SG   D  +L   + A + +  L  GK +H    +LG+E    V V 
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD--VFVQ 207

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N L+++Y++CG +E A   F G+  +++VSW ++I G+  NG   EA  +  +M+  R+V
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMR-QRNV 266

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +PD   +V+++    D   L +G+S+HG  ++  L ++  ++ SL   Y+K   +  A  
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326

Query: 335 LFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
            F+ +  + +++ WN+MIS            GLF+EM+    +    T+ + + +C    
Sbjct: 327 FFDQME-IPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           SL+  K +  +  K  + N+     AL+ M+  CG +  A  +  R + + D   W+ +I
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDR-TLDKDVVVWSAMI 444

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL-HGLALKSL 501
           V    +G  Q+AI  F +M +Q    P+ VT V +++AC +  L  EG  L H +     
Sbjct: 445 VGYGLHGRGQDAIDLFYAM-KQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM---KY 500

Query: 502 MGLDTRVQN--ALITMYGRCRDIKSA 525
            G++ R Q+   ++ + GR   +  A
Sbjct: 501 YGIEARHQHYACVVDLLGRSGHLNEA 526



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 204/469 (43%), Gaps = 37/469 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFL      T  + A  N+     +  +F E     V  WNA+I     +      +  +
Sbjct: 103 GFLV-----TKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMY 157

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G+  D  TL  ++ A + +  L+ G+ VH    + G  +D  + N  V +YAKC
Sbjct: 158 SRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKC 217

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F G+   + VSW +++SG   N  P + L  F +M     + D ++L S +
Sbjct: 218 GRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVL 277

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   + +L  GK IH   +K+G E  P + +  SL +MY++CG +  A   F  M   +
Sbjct: 278 RAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPN 335

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+ WNA+I G+A NG   EA  L  EM + +++  D  TV + I  CA    L   + + 
Sbjct: 336 VMMWNAMISGYAKNGYTNEAVGLFQEM-ISKNIRTDSITVRSAILACAQVGSLDLAKWMG 394

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            Y  +     D+ +  +L+D ++K  S+  A  +F+      D+V W++MI G       
Sbjct: 395 DYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD-KDVVVWSAMIVGYGLHGRG 453

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF  M       +  T + +L +CN    +E G     W+L    S    G+ A 
Sbjct: 454 QDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEG-----WELF--HSMKYYGIEA- 505

Query: 410 MHMYINC--------GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
            H +  C        G L  A+  +  +      S W  ++ AC    H
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 120/237 (50%), Gaps = 20/237 (8%)

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
           +I  A  VF+     ++  WN +I  +S +     A+E++  ++     P+  ++  +L 
Sbjct: 118 EIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLK 177

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           AC+ + VL  GK++HG +F LGF+ + F+ + L+ +Y+ C               ++  +
Sbjct: 178 ACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVS 237

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMIS YG +G   EA+ +F +M    ++P   +++S+L A +    +++G   +  ++
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDT 739
            +  +  E +  + +  M  + G++  A  F   + I P   +W AM+S  + +G T
Sbjct: 298 -KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI-PNVMMWNAMISGYAKNGYT 352


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/430 (34%), Positives = 246/430 (57%), Gaps = 21/430 (4%)

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
           S + A++ + ++  S+ + +++HC  +K + +++  IG + L+  Y+  G    A  L  
Sbjct: 39  SLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIG-DQLVSSYVELGCTKDALELFD 97

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +  + D   WN +I   ++       +     M  +    P+ VT++ V+SAC  +   
Sbjct: 98  ELP-DKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGEL 156

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             GK +HG+A+KS M L+ +V N+LI +YG+C  +++A  +FE     +L +WN M++  
Sbjct: 157 DVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVH 216

Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
                  + +  F   R      ++ ++VS+L AC  LGV +  + +HG++ + G   N 
Sbjct: 217 VHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNL 276

Query: 605 FISSALLDMYS-------NCK--------SNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
            I++ALLD+Y+       +CK           AW++M+S+Y  HG+G EAIE F  M   
Sbjct: 277 AIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVRE 336

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
           G+ P   +   LLSACSHSGLV+EG  Y+  M E Y V    EH+ C+VD+LGRSG L +
Sbjct: 337 GVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLND 396

Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           AY+ IK++P++P  GVWGA++ AC   G+ ++GK+VAE LF L+P +   YI+LSNMY A
Sbjct: 397 AYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSA 456

Query: 770 LGRWKDAVEI 779
            G+W+DA ++
Sbjct: 457 AGQWRDASKV 466



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 182/344 (52%), Gaps = 9/344 (2%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVE--NRCVVMGLHFFGEMVEEGIR 70
           L+++Y  +   + +L LF E  +KD+V+WN++I+      +  + +GL  F    E G++
Sbjct: 79  LVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGL-LFRMRFEMGLK 137

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T++ +VSA   +  L  G+ +H +++K+GM+ +  + N  +N+Y KCG L ++ C 
Sbjct: 138 PNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCL 197

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM     VSWN++++  +H    EK + YF  M  +G  +D  ++ S + A   LG  
Sbjct: 198 FEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVR 257

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              + +H   +  G + +  +++  +L+ +Y++ G +  + + F GM   D V+W A++ 
Sbjct: 258 KLAEAVHGYILNGGLDGN--LAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLS 315

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +A++G+  EA +   E+ +   V PD  T   L+S C+ S L+ EG++ +   +    G
Sbjct: 316 SYAMHGRGREAIEHF-ELMVREGVVPDHVTFTHLLSACSHSGLVEEGKN-YFKIMYEFYG 373

Query: 311 YDLLM--MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            +L +   + ++D   +S  L+ A  L  ++    +   W ++I
Sbjct: 374 VELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALI 417



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 209/452 (46%), Gaps = 50/452 (11%)

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           +S+ + A +    +SY + +H   IK    +  ++   + L+S Y + G  + A   F  
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIG--DQLVSSYVELGCTKDALELFDE 98

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           +  KD+VSWN++I GF+          LL  M+    ++P+  TV+ ++S CA    L  
Sbjct: 99  LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS--- 353
           G+ +HG A++  +  ++ ++NSL++ Y K   L  A  LF  ++ +  LVSWNSM++   
Sbjct: 159 GKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMS-VQSLVSWNSMVAVHV 217

Query: 354 ---------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                    G F  M         +T++++L +C +    +  +++H + L  G   N  
Sbjct: 218 HMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLA 277

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
              AL+ +Y   G L  +  +   +  N D   W  ++ +   +G  +EAI+ F+ M  +
Sbjct: 278 IATALLDLYAKLGTLSDSCKVFGGMI-NPDAVAWTAMLSSYAMHGRGREAIEHFELMV-R 335

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
           +   PD VT  +++SAC +  L  EGK+   + +    G++ RV++              
Sbjct: 336 EGVVPDHVTFTHLLSACSHSGLVEEGKNYFKI-MYEFYGVELRVEH-------------- 380

Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGV 584
                          ++CM+    ++     A +L + +  EPN     +++ AC   G 
Sbjct: 381 ---------------YSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGN 425

Query: 585 LRHGKQIHGHVFHLGFQEN-SFISSALLDMYS 615
           +  GK++   +F L   ++ ++I+  L +MYS
Sbjct: 426 IELGKEVAERLFSLDPSDSRNYIT--LSNMYS 455



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 205/433 (47%), Gaps = 25/433 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +++A++  + +   R +HC  IK+       + +  V+ Y + G    +   F  +   D
Sbjct: 44  LITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKD 103

Query: 139 TVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
            VSWN+++SG         CL L FR     G + + V++   V+A A +GEL  GK IH
Sbjct: 104 LVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIH 163

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
            + +K G      V V NSLI++Y +CG +EAA   F GM+ + +VSWN+++      G 
Sbjct: 164 GIAVKSGMLLE--VKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGL 221

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
            E+       M+    +  D ATVV+L+  C +  + +   +VHGY +   L  +L +  
Sbjct: 222 AEKGIGYFIMMR-RAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 318 SLMDFYSKSNSLSKAELLFNA-IAPMNDLVSWNSMISGL------------FKEMLYLCS 364
           +L+D Y+K  +LS +  +F   I P  D V+W +M+S              F+ M+    
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINP--DAVAWTAMLSSYAMHGRGREAIEHFELMVREGV 338

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMYINCGDLVA 421
                T   +L +C+    +E GK+   +++   F    + V   + ++ +    G L  
Sbjct: 339 VPDHVTFTHLLSACSHSGLVEEGKNY--FKIMYEFYGVELRVEHYSCMVDLLGRSGHLND 396

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVISA 480
           A+ L++ +    ++  W  +I AC   G+ +   +  + + +   + S + +TL N+ SA
Sbjct: 397 AYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSA 456

Query: 481 CGNLELAFEGKSL 493
            G    A + ++L
Sbjct: 457 AGQWRDASKVRAL 469



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 36/287 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    SL+  Y      E++  LF     + +V+WN+M+   V       G+ +F
Sbjct: 170 GMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYF 229

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   GI  D  T++ ++ A   +   K    VH   +  G+  + ++    +++YAK 
Sbjct: 230 IMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKL 289

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ S   F GM   D V+W  ++S    +    + + +F  M   G   D+V+ +  +
Sbjct: 290 GTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLL 349

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A +  G +  GK                    N    MY            F+G+  + 
Sbjct: 350 SACSHSGLVEEGK--------------------NYFKIMYE-----------FYGVELR- 377

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           V  ++ ++D    +G   +A+ L+  M +    EP+      LI  C
Sbjct: 378 VEHYSCMVDLLGRSGHLNDAYKLIKSMPM----EPNSGVWGALIGAC 420


>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g11460
 gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
 gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/432 (34%), Positives = 232/432 (53%), Gaps = 20/432 (4%)

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L++ ML   S     +   IL SC S      G+ +HC   K G       + AL+ MY 
Sbjct: 40  LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC 99

Query: 415 NCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
            CG +  A  + +    +S  S C+N +I   T N    +A   F+ M ++   S DSVT
Sbjct: 100 KCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KETGVSVDSVT 158

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
           ++ ++  C   E  + G+SLHG  +K  +  +  V N+ ITMY +C  +++   +F+   
Sbjct: 159 MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
              L TWN +IS +SQN      LEL+  ++     P+  ++VS+LS+C  LG  + G +
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278

Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
           +   V   GF  N F+S+A + MY+ C               KS  +W++MI  YG HG 
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338

Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           G   + LF +M   GIRP  +  + +LSACSHSGL D+GL+ +  M  EY + P  EH+ 
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           C+VD+LGR+G+L EA EFI+++P++P   VWGA+L AC  H +  M +     + + EP 
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN 458

Query: 756 NVGYYISLSNMY 767
           N+GYY+ +SN+Y
Sbjct: 459 NIGYYVLMSNIY 470



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 205/464 (44%), Gaps = 25/464 (5%)

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           S +    +  WN  +    + +   + +  +R M  SG   D  S    + + A L    
Sbjct: 11  SAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV 70

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTCKDVVSWNAII 249
            G+ +H    K G E  P+V    +LISMY +CG +  A + F     + +  V +NA+I
Sbjct: 71  SGQQLHCHVTKGGCETEPFV--LTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G+  N K  +A  +   M+    V  D  T++ L+ LC     L  GRS+HG  ++  L
Sbjct: 129 SGYTANSKVTDAAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
             ++ ++NS +  Y K  S+     LF+ + P+  L++WN++IS     GL  ++L L  
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEM-PVKGLITWNAVISGYSQNGLAYDVLELYE 246

Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q   S       TL+++L SC    + + G  +       GF  N    NA + MY  CG
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           +L  A ++   +   S  S W  +I     +G  +  +  F  M  ++   PD    V V
Sbjct: 307 NLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMI-KRGIRPDGAVFVMV 364

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YN 534
           +SAC +  L  +G  L   A+K    L+   ++   L+ + GR   +  A    ES    
Sbjct: 365 LSACSHSGLTDKGLELF-RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423

Query: 535 CNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
            +   W  ++ A   +K  ++  L   + +EFEPN I    ++S
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMS 467



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKD--VVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T+L++ Y        +  +F E        V +NA+I+    N  V    + F  M E G
Sbjct: 92  TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  DS T+L +V   T    L  GR +H   +K G+ ++ ++ N F+ MY KCG + +  
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M     ++WN ++SG   N      L  + +M  SG   D  +L S +++ A LG
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
               G  +  L    G+   P V V+N+ ISMY++CG++  A   F  M  K +VSW A+
Sbjct: 272 AKKIGHEVGKLVESNGF--VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
           I  + ++G  E    L  +M + R + PD A  V ++S C+ S L  +G  +   A++R 
Sbjct: 330 IGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKRE 387

Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             L       + L+D   ++  L +A     ++    D   W +++
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 207/467 (44%), Gaps = 32/467 (6%)

Query: 41  WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
           WN  +            +  +  M+  G   D+ +   I+ +   ++    G+ +HC   
Sbjct: 21  WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS--WNTIMSGCLHNNYPEKC 158
           K G   +  +    ++MY KCG +  +   F     +  +S  +N ++SG   N+     
Sbjct: 81  KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140

Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
              FR M  +G   D+V++   V        L  G+ +H   +K G +    V+V NS I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE--VAVLNSFI 198

Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEP 276
           +MY +CG +EA  R F  M  K +++WNA+I G++ NG    A+D+L   + M+S  V P
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL---AYDVLELYEQMKSSGVCP 255

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  T+V+++S CA     + G  V           ++ + N+ +  Y++  +L+KA  +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 337 NAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN----S 380
           + I P+  LVSW +MI              LF +M+    +   +  + +L +C+    +
Sbjct: 316 D-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374

Query: 381 PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
            + LE  +++   ++L+ G  + +     L+ +    G L  A   ++ +    D + W 
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYS----CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWG 430

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGNLE 485
            ++ AC  + +   A   F  + + + N     V + N+ S   N E
Sbjct: 431 ALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQE 477



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 4/250 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +    S +T Y      E+   LF E   K ++TWNA+I+   +N      L  +
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D  TL+ ++S+   +   K G  V  L    G + +  + N  ++MYA+C
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G+L  +   F  M     VSW T M GC   +   E  L+ F +M   G + D       
Sbjct: 306 GNLAKARAVFDIMPVKSLVSW-TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A +  G    G  +    +K  Y+  P     + L+ +  + G ++ A      M  +
Sbjct: 365 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423

Query: 241 -DVVSWNAII 249
            D   W A++
Sbjct: 424 PDGAVWGALL 433


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 298/594 (50%), Gaps = 95/594 (15%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  T+  ++  C +    R G + HG         ++ + N+L+  YS+  SL +A ++F
Sbjct: 9   DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68

Query: 337 NAIAP--MNDLVSWNSMISG------------LFKEMLYLCSQFSFS------TLLAILP 376
           + I    ++D++SWNS++S             LF +M  +  +   +      +++ ILP
Sbjct: 69  DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHNS 433
           +C S +++   K +H   ++ G   +    NAL+  Y  CG   + V  F++++      
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF----K 184

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ---------------------------- 465
           D   WN ++   +Q+G+F+ A + FK+M ++                             
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244

Query: 466 ------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-LMGLDTR---------VQ 509
                  + P+ VT+++V+SAC +L    +G  +H  +LK+ L+ LD           V 
Sbjct: 245 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304

Query: 510 NALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP 567
           NALI MY +CR  K+A ++F+       N+ TW  MI   +Q      AL+LF  +  EP
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364

Query: 568 -----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FISSALLDMYSNC--- 617
                N  +I  IL AC  L  +R GKQIH +V      ++S  F+++ L++MYS C   
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDV 424

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       KS  +W+SM++ YG HG+G EA+++F +M  +G  P   + + +L AC
Sbjct: 425 DTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 484

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SH G+VD+GL Y+++M  +Y + P  EH+   +D+L R G+L +A++ +K++P++P   V
Sbjct: 485 SHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV 544

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           W A+LSAC  H + ++ +     L ++  EN G Y  +SN+Y   GRWKD   I
Sbjct: 545 WVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 159/667 (23%), Positives = 289/667 (43%), Gaps = 137/667 (20%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+  G R D  TL  ++ A  ++   + G   H L    G  ++  +CN  V MY++CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 124 LNSSECTFSGMH---CADTVSWNTIMSGCLHNNYPEKCLLYFREMGW------SGEQADN 174
           L  +   F  +      D +SWN+I+S  + ++     L  F +M        + E++D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +S+ + + A   L  +   K +H   I+ G + D   V V N+LI  Y++CG +E A + 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD---VFVGNALIDAYAKCGLMENAVKV 177

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ------------------------ 269
           F  M  KDVVSWNA++ G++ +G F+ AF+L   M+                        
Sbjct: 178 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 237

Query: 270 ----------LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL---------- 309
                     +     P+  T+++++S CA      +G  +H Y+++  L          
Sbjct: 238 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 297

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND--LVSWNSMISG------------L 355
             DL++ N+L+D YSK  S   A  +F+ I P+ +  +V+W  MI G            L
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDI-PLEERNVVTWTVMIGGHAQYGDSNDALKL 356

Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT--IGVNALM 410
           F EM+   Y  +  ++ T+  IL +C    ++  GK IH + L+    +++     N L+
Sbjct: 357 FVEMISEPYGVAPNAY-TISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLI 415

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
           +MY  CGD+  A  +   +S  S  S W  ++     +G   EA+  F  M ++    PD
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQKSAIS-WTSMMTGYGMHGRGSEALDIFDKM-RKAGFVPD 473

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-----ALITMYGRCRDIKSA 525
            +T + V+ AC +  +  +G S    ++ +  GL  R ++      L+  +GR       
Sbjct: 474 DITFLVVLYACSHCGMVDQGLSYFD-SMSADYGLTPRAEHYAYAIDLLARFGRLD----- 527

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
                                        +A +  + +  EP  +  V++LSAC      
Sbjct: 528 -----------------------------KAWKTVKDMPMEPTAVVWVALLSAC------ 552

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
               ++H +V      E++   + L++M  N +++ +++ + + Y   G+  +   + H 
Sbjct: 553 ----RVHSNV---ELAEHAL--NKLVEM--NAENDGSYTLISNIYATAGRWKDVARIRHL 601

Query: 646 MCNSGIR 652
           M  SGI+
Sbjct: 602 MKKSGIK 608



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 212/488 (43%), Gaps = 90/488 (18%)

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML   ++    TL  +L +C    S   G + H      GF +N    NAL+ MY  CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 419 LVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMT-----QQQNASPDS 471
           L  A  +   I+     D   WN ++ A  ++ +   A+  F  MT     +  N   D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           +++VN++ ACG+L+   + K +HG A+++   LD  V NALI  Y +C  +++A  VF  
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE------------------------- 566
               ++ +WN M++ +SQ+     A ELF+++  E                         
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 567 -------------PNEISIVSILSACTQLGVLRHGKQIHGHVFH----------LGFQEN 603
                        PN ++I+S+LSAC  LG    G +IH +              G  E+
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 604 SFISSALLDMYSNCKSNAA-----------------WSSMISAYGYHGKGWEAIELFHEM 646
             + +AL+DMYS C+S  A                 W+ MI  +  +G   +A++LF EM
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 647 CNS--GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE--EYDVRPETEHHV--CIVDM 700
            +   G+ P   ++  +L AC+H   +  G Q +  +L   +YD    + + V  C+++M
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYD---SSAYFVANCLINM 417

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-----PE 755
             + G +  A     ++  Q     W +M++    HG    G +  ++  K+      P+
Sbjct: 418 YSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHG---RGSEALDIFDKMRKAGFVPD 473

Query: 756 NVGYYISL 763
           ++ + + L
Sbjct: 474 DITFLVVL 481



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 234/560 (41%), Gaps = 112/560 (20%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNK---DVVTWNAMITACVENRCVVMGL 58
           GF +++    +L+  YS     E +  +F E   +   DV++WN++++A V++      L
Sbjct: 40  GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 99

Query: 59  HFFGEMV------EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCN 112
             F +M           R D  +++ I+ A   +  + Q + VH  +I+ G   D  + N
Sbjct: 100 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 159

Query: 113 VFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG----------------CLHNNYP- 155
             ++ YAKCG + ++   F+ M   D VSWN +++G                    N P 
Sbjct: 160 ALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPL 219

Query: 156 ------------------EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
                              + L  FR+M +SG   + V++ S ++A A LG  S G  IH
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279

Query: 198 ALGIK---------LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWN 246
           A  +K          G ED   + V N+LI MYS+C   +AA   F  +    ++VV+W 
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLM-VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWT 338

Query: 247 AIIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
            +I G A  G   +A  L  EM      V P+  T+  ++  CA    +R G+ +H Y +
Sbjct: 339 VMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 398

Query: 306 RRLLGYD---LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
           R    YD     + N L++ YSK   +  A  +F++++     +SW SM++G        
Sbjct: 399 RH-HQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMHGRGS 456

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
               +F +M          T L +L +C+           HC  +  G S          
Sbjct: 457 EALDIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLS---------- 495

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             Y +   + A + L  R  H      +   I    + G   +A KT K M  +    P 
Sbjct: 496 --YFD--SMSADYGLTPRAEH------YAYAIDLLARFGRLDKAWKTVKDMPME----PT 541

Query: 471 SVTLVNVISAC---GNLELA 487
           +V  V ++SAC    N+ELA
Sbjct: 542 AVVWVALLSACRVHSNVELA 561


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/560 (30%), Positives = 290/560 (51%), Gaps = 43/560 (7%)

Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
            G+  +A +L  EM+  R +  D   V +L++ C     L EGR +H + I      D+ 
Sbjct: 8   EGRPLQALELWGEME-ERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIP 66

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
           +  +L+  Y+K  SL  A+ +F  +  + DL +W+S+I+             L++ M+  
Sbjct: 67  LETALLQMYAKCGSLDDAKRVFEGM-EIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAE 125

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             + +  T    L  C S   L  G++IH   L      + +  ++L++MY+ C ++V A
Sbjct: 126 GVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEA 185

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC- 481
             + + +   +  S +  +I A  Q G   EA++ F  M++ +   P++ T   ++ A  
Sbjct: 186 RKVFEGMKARNVRS-YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVE 244

Query: 482 --GNLELAFEGKSLHG-LALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCN 536
             GNLE   +G+ +H  LA +   G DT V  QNAL+TMYG+C     A  VF+S    N
Sbjct: 245 GLGNLE---KGRKVHRHLASR---GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 298

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           + +W  MI+A++Q+     AL LF+ ++ EP+ +S  S L+AC  LG L  G++IH  V 
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVV 358

Query: 597 HLGFQENSFISSALLDMYSNC-------------KSNAAWS--SMISAYGYHGKGWEAIE 641
                    + ++LL MY+ C             K+  A+S  +MI+A+  HG+  +A+ 
Sbjct: 359 EANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALR 417

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           ++ +M   GI     + +S+L ACSH+ LV +   +  +++ ++ V P  EH++C+VD+L
Sbjct: 418 IYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVL 477

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GRSG+L +A E ++ +P Q     W  +LS C  HGD   G++ A  +F+L P     Y+
Sbjct: 478 GRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYV 537

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LSNMY A  R+ DA  + K
Sbjct: 538 FLSNMYAAAKRFDDARRVRK 557



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 275/589 (46%), Gaps = 56/589 (9%)

Query: 44  MITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAG 103
           MI ACV     +  L  +GEM E GI  D   +  +V+A T++  L++GR +H   I  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 104 MIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR 163
              D  L    + MYAKCG L+ ++  F GM   D  +W++I++        E  ++ +R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMY 221
            M   G + + V+ + A+   A +  L+ G+ IH   L  K+  +D     + +SL++MY
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDD----VLQDSLLNMY 176

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATV 281
            +C ++  A + F GM  ++V S+ A+I  +   G+  EA +L   M  + ++EP+  T 
Sbjct: 177 LKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTF 236

Query: 282 VTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
            T++        L +GR VH +   R    ++++ N+L+  Y K  S  +A  +F+++  
Sbjct: 237 ATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA 296

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
            N ++SW SMI+             LFK M    S  SFS+    L +C    +L+ G+ 
Sbjct: 297 RN-VISWTSMIAAYAQHGNPQEALNLFKRMDVEPSGVSFSS---ALNACALLGALDEGRE 352

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           IH   ++   ++  +   +L+ MY  CG L  A  +  R+      SC N +I A TQ+G
Sbjct: 353 IHHRVVEANLASPQME-TSLLSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHG 410

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
             ++A++ ++ M +Q+    D +T V+V+ AC +  L  +                    
Sbjct: 411 RKKQALRIYRKM-EQEGIPADGITFVSVLVACSHTSLVAD-------------------- 449

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
                    CRD    S V +      +  + CM+    ++     A EL   + ++ + 
Sbjct: 450 ---------CRDFLQ-SLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADA 499

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
           ++ +++LS C + G L  G++    VF L   E +     L +MY+  K
Sbjct: 500 VAWMTLLSGCKRHGDLDRGERAARKVFELAPAE-TLPYVFLSNMYAAAK 547



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 205/480 (42%), Gaps = 34/480 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +P  T+LL  Y+     + +  +F     KD+  W+++I A        M +  +
Sbjct: 60  GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG+  +  T    +     +  L  GR +H   + + +  D  L +  +NMY KC
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            ++  +   F GM   +  S+  ++S  +    + E   L+ R       + +  + ++ 
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LG L  G+ +H      G++ +  V V N+L++MY +CG    A + F  MT +
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTN--VVVQNALVTMYGKCGSPVEARKVFDSMTAR 297

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW ++I  +A +G  +EA +L   M     VEP   +  + ++ CA    L EGR +
Sbjct: 298 NVISWTSMIAAYAQHGNPQEALNLFKRM----DVEPSGVSFSSALNACALLGALDEGREI 353

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H   +   L     M  SL+  Y++  SL  A  +FN +    D  S N+MI+     G 
Sbjct: 354 HHRVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRM-KTRDAFSCNAMIAAFTQHGR 411

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            K+ L +  +           T +++L +C+    +       C         +  GV  
Sbjct: 412 KKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLV-----ADCRDFLQSLVMDH-GVVP 465

Query: 409 LMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           L+  Y+         G L  A  L++ + + +D   W  ++  C ++G      +  + +
Sbjct: 466 LVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKV 525



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 42/312 (13%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  ++    +L+T Y        +  +F     ++V++W +MI A  ++      L+ 
Sbjct: 262 RGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNL 321

Query: 61  FGEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           F  M  E  G+ F S      ++A   +  L +GR +H   ++A + A   +    ++MY
Sbjct: 322 FKRMDVEPSGVSFSSA-----LNACALLGALDEGREIHHRVVEANL-ASPQMETSLLSMY 375

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           A+CG L+ +   F+ M   D  S N +++    +   ++ L  +R+M   G  AD ++  
Sbjct: 376 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFV 435

Query: 179 SAVAA---SACLGE---------LSYGKV---------IHALGI--KLG-----YEDSPY 210
           S + A   ++ + +         + +G V         +  LG   +LG      E  PY
Sbjct: 436 SVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPY 495

Query: 211 VSVTNSLISMYSQC---GDIEAAERA---FWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
            +   + +++ S C   GD++  ERA    + +   + + +  + + +A   +F++A  +
Sbjct: 496 QADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRV 555

Query: 265 LHEMQLMRSVEP 276
             EM+      P
Sbjct: 556 RKEMEERGVTRP 567



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 58/117 (49%), Gaps = 2/117 (1%)

Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
           MI+A    G+  +A+EL+ EM   GI   K  V SL++AC+    ++EG + + +++   
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLI-IT 59

Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
             R +      ++ M  + G L +A    + + I+     W ++++A +  G  +M 
Sbjct: 60  GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK-DLFAWSSIIAAYARAGRGEMA 115


>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 186/629 (29%), Positives = 296/629 (47%), Gaps = 76/629 (12%)

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD---I 278
           + C  +E+A+  F  +    + S    +  F   G   +AF  +  ++L  S       +
Sbjct: 41  ASCNALESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIV 100

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF-- 336
             + +L+S C D   L EGR +HG+ I        +++  L+ FYS  N L  A ++   
Sbjct: 101 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 160

Query: 337 -NAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPES 383
            N + P      WN +IS              +K+M+    +    T  ++L +C     
Sbjct: 161 SNILHPF----PWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELD 216

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L FGK +H          + I  NAL+ MY  CG +  A  L  +I    D   WN +I 
Sbjct: 217 LGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER-DAVSWNSMIS 275

Query: 444 ACTQNGHFQEAIKTFKSMTQQQ----------------------------------NASP 469
                G + EA + F SM  +                                    +  
Sbjct: 276 VYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHL 335

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV L+  + AC ++  A  GK +H  A++S  G    V+NALITMY RC+D+K A  +F
Sbjct: 336 DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLF 395

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           +     +L TWN +IS          A  L R +     EPN ++I S+L  C ++  L+
Sbjct: 396 QLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQ 455

Query: 587 HGKQIHGHVFHL-GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           HGK+ H ++     F+++  + +AL+DMY+                 +    ++SMI+ Y
Sbjct: 456 HGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY 515

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G  G+G  A++LF EM N  I+P   ++I++LSACSHSGLV +G   +  M   Y + P 
Sbjct: 516 GMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPH 575

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH  C+ D+ GR+G L +A E I+N+P +P P +W  ++ AC  H +T++G+  AE L 
Sbjct: 576 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLL 635

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +++PEN GYY+ ++NMY A G W    ++
Sbjct: 636 EMKPENPGYYVLIANMYAAAGCWNKLAKV 664



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 227/522 (43%), Gaps = 64/522 (12%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++S+ T +  L +GR +H   I  G      L    V  Y+    L  +       +   
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH- 197
              WN ++S  + N + +K L  +++M   G + DN +  S + A     +L +GK +H 
Sbjct: 166 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE 225

Query: 198 ---ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
              A  IK        + V N+LISMY +CG +  A   F  +  +D VSWN++I  +A 
Sbjct: 226 SINASRIKWS------LIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYAS 279

Query: 255 NGKFEEAFDLLHEM--------------------------------QLMRSVEPDIATVV 282
            G + EAF+L   M                                  MR     + +V 
Sbjct: 280 MGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVA 339

Query: 283 TLISLCADSLL--LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
            +I L A S +   + G+ +H +AIR   G    + N+L+  YS+   L  A LLF  + 
Sbjct: 340 LIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQ-LM 398

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
               L++WNS+ISG            L +EML    + ++ T+ ++LP C    +L+ GK
Sbjct: 399 EAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGK 458

Query: 389 SIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             HC+  +   F ++ +  NAL+ MY   G ++ A  +   +    D   +  +I     
Sbjct: 459 EFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER-DKMTYTSMIAGYGM 517

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            G  Q A+K F+ M   Q   PD +T++ V+SAC +  L  +G+ L    ++SL GL   
Sbjct: 518 QGEGQAALKLFEEMNNFQ-IKPDHITMIAVLSACSHSGLVTQGQLLFE-KMRSLYGLTPH 575

Query: 508 VQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           +++   +  ++GR   +  A  +  +  Y      W  +I A
Sbjct: 576 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 617



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 237/534 (44%), Gaps = 60/534 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H      L+T YS  +    +  +   +       WN +I++ V N      L  +
Sbjct: 130 GFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAY 189

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAK 120
            +MV++GIR D+ T   ++ A  +   L  G+ VH  SI A  I  S +  N  ++MY K
Sbjct: 190 KQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNALISMYGK 248

Query: 121 CGDLNSSECTFSGMHCADTVS-----------------------------------WNTI 145
           CG +  +   F  +   D VS                                   WNTI
Sbjct: 249 CGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTI 308

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK--L 203
             G L     +  L    +M   G   D+V+L   + A + +G+   GK IH+  I+   
Sbjct: 309 AGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCF 368

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G  D    +V N+LI+MYS+C D++ A   F  M  K +++WN+II G     + EEA  
Sbjct: 369 GEVD----TVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASF 424

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD-LLMMNSLMDF 322
           LL EM L+  +EP+  T+ +++ LCA    L+ G+  H Y  RR    D LL+ N+L+D 
Sbjct: 425 LLREM-LLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDM 483

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           Y++S  + +A  +F+ +    D +++ SMI+G            LF+EM     +    T
Sbjct: 484 YARSGKVLEARRVFDMLGE-RDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHIT 542

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           ++A+L +C+    +  G+ +      L G + +      +  ++   G L  A  +++ +
Sbjct: 543 MIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNM 602

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV-NVISACG 482
            +    + W  +I AC  + + +      + + + +  +P    L+ N+ +A G
Sbjct: 603 PYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAG 656


>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
          Length = 659

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 277/556 (49%), Gaps = 50/556 (8%)

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLL-----LREGRSVHGYAIRRLLGYDLLMM 316
           F LL   +L R + P   T   L+   A  L      LR G  +H  ++   L    +++
Sbjct: 52  FPLLAFSRLRRHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHPILL 111

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILP 376
             L+  Y+   SL  +     A       +  N ++  +F             T  ++L 
Sbjct: 112 PRLLSVYTSHPSLLPSAASVAAALAAYQEMGKNGVLPDVF-------------TYPSVLR 158

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C     L  G+++H      G   N    NALM MY  CGDL +A  +   +    D  
Sbjct: 159 ACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQR-DVV 217

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQN-------------ASPDSVTLVNVISACGN 483
            WN +I +    G + EA++ F+ M  +               A  D VTLV  ++AC  
Sbjct: 218 SWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMVRGGAEVDYVTLVIGLNACSR 277

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           +     GK +HGLA++        V NALITMY RC+D++ A  +F       + TWN M
Sbjct: 278 VGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTM 337

Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           +S+F+ +     A  +FR +     +PN +++V+ L+ C ++  L+HG+++HGH+   GF
Sbjct: 338 LSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGF 397

Query: 601 QENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHE 645
           +    + ++L+DMYS     +               +++SMI+ YG  GKG  A+ LF +
Sbjct: 398 KGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQ 457

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M +SGI+P    ++++LSACSHSGLV EG + +N M+  Y ++P+ EH+ C++D+  R+G
Sbjct: 458 MIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAG 517

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
            L++A E + + P  P   +W A++ AC   G+ ++G++ A  L ++  EN G+Y+ ++N
Sbjct: 518 LLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIAN 577

Query: 766 MYVALGRWKDAVEIGK 781
           MY A G W +   + K
Sbjct: 578 MYAAAGCWDELATVRK 593



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 231/474 (48%), Gaps = 35/474 (7%)

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + EM + G+  D  T   ++ A  +   L  GR VH  +  AGM  +    N  ++MYAK
Sbjct: 138 YQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAK 197

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLY-------------FREMG 166
           CGDL S+   F GM   D VSWN+++S       + E   L+              REM 
Sbjct: 198 CGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMV 257

Query: 167 WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD 226
             G + D V+L   + A + +G L  GK IH L +++  +     SV+N+LI+MY++C D
Sbjct: 258 RGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVE--SVSNALITMYARCKD 315

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           +E A   F  + C  VV+WN ++  FAL+   EEA  +  EM + R V+P+  TVVT ++
Sbjct: 316 MECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREM-ICRGVKPNYVTVVTYLA 374

Query: 287 LCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
           LCA    L+ G+ +HG+ ++    GY LL  NSL+D YSKS  LS A+ +F+ +    D+
Sbjct: 375 LCARVANLQHGQELHGHIVKHGFKGYRLL-WNSLIDMYSKSGRLSVAQNVFDTMDDC-DM 432

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHC 392
           +S+ SMI+G            LF++M+    +     ++ +L +C +S   LE  +  + 
Sbjct: 433 ISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNK 492

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +  G        + ++ +Y   G L  A  +L        ++ W  ++ AC   G+ +
Sbjct: 493 MVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIE 552

Query: 453 EAIKTFKSMTQQQNASPDSVTLV-NVISACGNL-ELAFEGKSLHGLALKSLMGL 504
              +  + + + +  +     L+ N+ +A G   ELA   K +  L +    GL
Sbjct: 553 IGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGL 606



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 175/345 (50%), Gaps = 26/345 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH---------- 59
           +L++ Y+      S+  +F     +DVV+WN+MI+  A V      M L           
Sbjct: 190 ALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEP 249

Query: 60  --FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
                EMV  G   D  TL+I ++A +++  L+ G+ +H L+++       S+ N  + M
Sbjct: 250 VGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITM 309

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+C D+  +   F  + C   V+WNT++S    ++  E+    FREM   G + + V++
Sbjct: 310 YARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTV 369

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
            + +A  A +  L +G+ +H   +K G++   Y  + NSLI MYS+ G +  A+  F  M
Sbjct: 370 VTYLALCARVANLQHGQELHGHIVKHGFKG--YRLLWNSLIDMYSKSGRLSVAQNVFDTM 427

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
              D++S+ ++I G+ + GK   A  L  +M +   ++PD   +VT++S C+ S L+ EG
Sbjct: 428 DDCDMISYTSMIAGYGMQGKGTVALRLFEQM-IDSGIKPDHIIMVTVLSACSHSGLVLEG 486

Query: 298 -----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
                + V  Y I+  + +     + ++D Y+++  L KAE + +
Sbjct: 487 EELFNKMVISYGIKPQMEH----YSCMIDLYARAGLLEKAEEMLD 527


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 235/422 (55%), Gaps = 23/422 (5%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           +L  C S     FG+ +H   ++ GF ++     AL+ MY  CG++  A  +  R+    
Sbjct: 138 VLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML-IR 196

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D  CW  +I    Q     +A+  F+ M Q++    D +T ++V SA G L       S+
Sbjct: 197 DVVCWTAMITLYEQAERPLKALMLFRKM-QEEGFLGDEITAISVASAVGQLGDGRMAISV 255

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           HG A+ +    D  V N+++ MY +C +++ A  VF+     N  +WN M+S ++QN   
Sbjct: 256 HGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRP 315

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             AL LF  +   E +PN ++ + ++SAC+ LG    G+++H  V       ++ + +A+
Sbjct: 316 TDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAI 375

Query: 611 LDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +DMY  C                 +  ++W+ +IS YG HG G EA+ELF  M   G+ P
Sbjct: 376 MDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEP 435

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              +  S+LSACSH+GL+DEG + + +M  +  VRPE +H+ C+VDMLGR+G L EA+  
Sbjct: 436 NDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRL 494

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           IK +P +P   VWGA+L AC  HG+T++G+  A  LF+LEPE+ GYY+ +SN+Y A  +W
Sbjct: 495 IKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKW 554

Query: 774 KD 775
           K+
Sbjct: 555 KE 556



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 203/471 (43%), Gaps = 25/471 (5%)

Query: 1   RGFLAHLPTSTS-LLTAYSNVSYFESSLALF--------YETCNKDVVTWNAMITACVEN 51
           RGFL H P   + L+  YS +    S+  LF          T   +    N M+ A    
Sbjct: 51  RGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANA 110

Query: 52  RCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC 111
                 +  +  M   G+  ++ T   ++           G VVH   ++ G  +D  + 
Sbjct: 111 GRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE 170

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
              V+MYAKCG++  +   F  M   D V W  +++       P K L+ FR+M   G  
Sbjct: 171 AALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFL 230

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D ++  S  +A   LG+      +H   +  G+     VSV NS++ MY++CG++E A 
Sbjct: 231 GDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGD--VSVGNSIVGMYAKCGNVERAR 288

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  M  ++ +SWN+++ G+  NG+  +A  L ++MQ     +P+  T + ++S C+  
Sbjct: 289 LVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ-ASECDPNPVTALIMVSACSYL 347

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNS 350
                GR +H + I   +  D  + N++MD Y K   L  A  +FN       D+ SWN 
Sbjct: 348 GSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNV 407

Query: 351 MISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           +ISG       KE L L S+           T  +IL +C+    ++ G+       KL 
Sbjct: 408 LISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLS 467

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
                     ++ M    G L  AF L+++I        W  +++AC  +G
Sbjct: 468 VRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 518



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 193/412 (46%), Gaps = 37/412 (8%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCGDLVAAFSLLQRI--- 429
           +L  C S  +L   K IH      GF  +T    A L+ +Y   GDL +A +L       
Sbjct: 31  LLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHH 87

Query: 430 ----SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
               +   ++   N ++ A    G   EAI  +  M Q+     ++ T   V+  C +  
Sbjct: 88  HHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM-QRMGVGVNNFTYPFVLKVCASEL 146

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            A  G+ +HG  +++  G D  V+ AL+ MY +C +I  A  VF+     ++  W  MI+
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            + Q +  ++AL LFR ++   F  +EI+ +S+ SA  QLG  R    +HG+    GF  
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           +  + ++++ MY+ C               ++  +W+SM+S Y  +G+  +A+ LF++M 
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML-EEYDVRPETEHHVCIVDMLGRSGK 706
            S   P   + + ++SACS+ G    G + +N ++  + D+  +T     I+DM  + G 
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDI--DTTLRNAIMDMYMKCGD 384

Query: 707 LQEAYEFIKNLPIQPKP-GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           L  A E   N  +  +    W  ++S    HG    GK+  EL  +++ E V
Sbjct: 385 LDTAVEMFNNCELGERDVSSWNVLISGYGVHGH---GKEALELFSRMQVEGV 433


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 285/536 (53%), Gaps = 41/536 (7%)

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +  L+  C+ + L  +G  VH  A+    G+DL+M N L+D Y K + +  A  +F+ + 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 341 PMNDLVSWNSMISGLFKE------MLYLC---------SQFSFSTLLAILPSCNSPESLE 385
             N +VSW +++ G  +E      +  LC         ++F+FST    L +C +   +E
Sbjct: 67  ERN-VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFST---SLKACGALGVVE 122

Query: 386 FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            G  IH   +K GF   ++  NA + MY  CG +  A  +  ++   +  S WN +I   
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMIAGH 181

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
           T  G+ ++++  F+ M Q Q   PD  T  + + ACG L     G  +H   +     + 
Sbjct: 182 THEGNGRKSLVLFQRM-QGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPIS 240

Query: 506 TR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL 563
            R  + +A++ +Y +C  +  A  VF+     NL +W+ +I  F+Q    + A++LFR L
Sbjct: 241 IRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL 300

Query: 564 EFEPNEIS--IVSILSAC-TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
               + +   ++SI+      L ++  GKQ+H ++  +    +  ++++++DMY  C   
Sbjct: 301 RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLT 360

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       ++  +W+ MI+ YG HG G +AI LF+ M   GI   + + ++LLSAC
Sbjct: 361 EEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           SHSGL+ E  +Y++ +   + ++P  EH+ C+VD+LGR+G+L+EA   I+N+ ++P  G+
Sbjct: 421 SHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGI 480

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           W  +LSAC  HG+ ++G++V E+LF+++ +N   Y+ +SN+Y   G WK+   + K
Sbjct: 481 WQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRK 536



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 235/500 (47%), Gaps = 26/500 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +  L+  Y   S  + + ++F     ++VV+W A++   ++       L   
Sbjct: 34  GFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALL 93

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM   G++ +  T    + A   +  ++ G  +H + +K+G    S + N  ++MY+KC
Sbjct: 94  CEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKC 153

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  F+ M   + VSWN +++G  H     K L+ F+ M   GE  D  + +S +
Sbjct: 154 GRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTL 213

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG +  G  IHA  I  G+  S    + ++++ +Y++CG +  A++ F  +  K+
Sbjct: 214 KACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKN 273

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV-EPDIATVVTLISLCADSLLLREGRSV 300
           ++SW+A+I GFA  G   EA DL    QL  SV   D   +  ++ + AD  L+ +G+ +
Sbjct: 274 LISWSALIQGFAQEGNLLEAMDLFR--QLRESVSNVDGFVLSIMMGVFADLALVEQGKQM 331

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y ++   G D+ + NS++D Y K     +AE LF+ +   N +VSW  MI+G      
Sbjct: 332 HCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRN-VVSWTVMITGYGKHGL 390

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSP----ESLE-FGKSIHCWQLKLGFSNNT 403
                 LF  M     +      LA+L +C+      ES E F +  +  Q+K    +  
Sbjct: 391 GEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYA 450

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
             V+ L       G L  A +L++ +    +   W  ++ AC  +G+ +   +  + + +
Sbjct: 451 CMVDILGR----AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFR 506

Query: 464 QQNASP-DSVTLVNVISACG 482
               +P + V + N+ +  G
Sbjct: 507 MDTDNPVNYVMMSNIYAEAG 526



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 241/534 (45%), Gaps = 61/534 (11%)

Query: 87  NCLK-----QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
           NC K     QG  VH  ++  G   D  + N  ++MY KC  ++ +   F  M   + VS
Sbjct: 13  NCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVS 72

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
           W  +M G L     +  L    EMG+SG + +  + S+++ A   LG +  G  IH + +
Sbjct: 73  WTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCV 132

Query: 202 KLGYEDSPYVSVT-NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
           K G+E   +VSV  N+ I MYS+CG I  AE+ F  M  +++VSWNA+I G    G   +
Sbjct: 133 KSGFE---WVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN--- 317
           +  L   MQ    V PD  T  + +  C     +R G  +H   I R  G+ + + N   
Sbjct: 190 SLVLFQRMQGQGEV-PDEFTFTSTLKACGALGAIRGGTQIHASLITR--GFPISIRNIIA 246

Query: 318 -SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL----- 371
            +++D Y+K   L +A+ +F+ I   N L+SW+++I G  +E   L +   F  L     
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKN-LISWSALIQGFAQEGNLLEAMDLFRQLRESVS 305

Query: 372 ------LAILPSCNSPESL-EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
                 L+I+    +  +L E GK +HC+ LK+    +    N+++ MY+ CG    A  
Sbjct: 306 NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAER 365

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           L   +   +  S W ++I    ++G  ++AI  F  M Q      D V  + ++SAC + 
Sbjct: 366 LFSEMQVRNVVS-WTVMITGYGKHGLGEKAIHLFNRM-QLDGIELDEVAYLALLSACSHS 423

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
            L  E +              +R+ N           +K            N+  + CM+
Sbjct: 424 GLIRESQEYF-----------SRLCNN--------HQMKP-----------NIEHYACMV 453

Query: 545 SAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
               +      A  L  +++ +PNE    ++LSAC   G L  G+++   +F +
Sbjct: 454 DILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRM 507


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 142/410 (34%), Positives = 233/410 (56%), Gaps = 20/410 (4%)

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           K +H      G  ++ I  N L++M     DLV A  L  ++    D   W+++I    +
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER-DPVSWSVMIGGFVK 78

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
           NG ++   +TF+ + +   + PD+ +L  VI AC +      G+ +H   LK+ + LD  
Sbjct: 79  NGDYERCFQTFRELIRA-GSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNF 137

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V + L+ MY +C  I +A  +F+     +L T   MI+ +++      +  LF  +    
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDG 197

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
           F P+++++V+I++AC +LG +   + +H +V    +  +  + +A++DMY+ C       
Sbjct: 198 FVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSR 257

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K+  +WS+MI AYGYHG+G EA+ELFH M NSGI P + + ISLL ACSH+G
Sbjct: 258 EIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAG 317

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVD+GLQ ++ M   Y VRP+ +H+ C+VD+LGR+G+L +A   I+N+ ++   G+W A 
Sbjct: 318 LVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAF 377

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           L AC  H    + ++ A+LL  L+ +N G+YI LSN+Y   GRWKD  +I
Sbjct: 378 LGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKI 427



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 17/414 (4%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +S L +   + Q + VH      G+I D  + N  + M AK  DL ++   F+ M   D 
Sbjct: 7   ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDP 66

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW+ ++ G + N   E+C   FRE+  +G + DN SL   + A      L  G++IH+ 
Sbjct: 67  VSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHST 126

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
            +K G     +V  T  L+ MY++CG I+ A++ F  M  KD+V+   +I G+A  GK  
Sbjct: 127 VLKNGLHLDNFVCST--LVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           E++ L  +M+    V PD   +VT+++ CA    + + R VH Y   R    D+ +  ++
Sbjct: 185 ESWVLFDQMRRDGFV-PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAM 243

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D Y+K  S+  +  +F+ +   N ++SW++MI              LF  ML      +
Sbjct: 244 IDMYAKCGSIDSSREIFDRMEQKN-VISWSAMIGAYGYHGQGREALELFHMMLNSGIIPN 302

Query: 368 FSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
             T +++L +C+    ++ G  +     +  G   +      ++ +    G L  A  L+
Sbjct: 303 RITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLI 362

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           + +    D   W   + AC  +     A K  K +   Q  +P    L++ I A
Sbjct: 363 ENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYA 416



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 169/352 (48%), Gaps = 12/352 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +  L  +  LL   +      ++  LF +   +D V+W+ MI   V+N         F
Sbjct: 30  GIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTF 89

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++  G + D+ +L  ++ A      L  GR++H   +K G+  D+ +C+  V+MYAKC
Sbjct: 90  RELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKC 149

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +++++  F  M   D V+   +++G      P +  + F +M   G   D V++ + V
Sbjct: 150 GMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIV 209

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG ++  +++H       Y  S  V +  ++I MY++CG I+++   F  M  K+
Sbjct: 210 NACAKLGAMNKARLVHDYVCARRY--SLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKN 267

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW+A+I  +  +G+  EA +L H M L   + P+  T ++L+  C+ + L+ +G  + 
Sbjct: 268 VISWSAMIGAYGYHGQGREALELFH-MMLNSGIIPNRITFISLLYACSHAGLVDDGLQLF 326

Query: 302 -----GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
                 Y +R     D+     ++D   ++  L +A  L   +    D   W
Sbjct: 327 SLMSVSYGVRP----DVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIW 374



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 28/299 (9%)

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D    ++ +  C N+   F+ K +H     + +  D  V N L+ M  + +D+ +A  +F
Sbjct: 2   DPDFFISTLFKCRNI---FQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLF 58

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
                 +  +W+ MI  F +N    R  + FR L     +P+  S+  ++ AC     L 
Sbjct: 59  NKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI 118

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
            G+ IH  V   G   ++F+ S L+DMY+ C               K     + MI+ Y 
Sbjct: 119 MGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYA 178

Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM-LEEYDVRPE 690
             GK  E+  LF +M   G  P K +++++++AC+  G +++    ++ +    Y +  +
Sbjct: 179 ECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL--D 236

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
            E    ++DM  + G +  + E    +  Q     W AM+ A  +HG    G++  EL 
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRME-QKNVISWSAMIGAYGYHG---QGREALELF 291


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 179/605 (29%), Positives = 291/605 (48%), Gaps = 46/605 (7%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N L++ YS  G + AA R F  +   D  SWN+++      G   +A+ LL  M   R +
Sbjct: 30  NQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMH-ARGL 87

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
                 + + +   A +     G  +  +++R  L  ++   ++L+D Y+K   L  A  
Sbjct: 88  AASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARR 147

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +F+ + P+ ++VSWN++I+G            LF EM  + S    +T   +L +   P 
Sbjct: 148 VFDGM-PVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPR 206

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
                + +H   +K G +   + +NA +  Y  C  L  +  +   I  + D   WN ++
Sbjct: 207 WYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGI-ESRDLISWNSML 265

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA-FEGKSLHGLALKSL 501
            A   +G   EA++ F  M ++    PD  +  + IS C        +G+S+H L +K  
Sbjct: 266 GAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFG 325

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-------NLCTWNCMISAFSQNKAEV 554
           +   T V NA+I MY R  D    + + E  YNC       +  +WN M++ +S +    
Sbjct: 326 LEGVTPVCNAMIAMYTRFAD----NCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSS 381

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            AL+ FR +  E    +E  + + L +C+ L VLR G+Q+H  V   GF  N F+SS+L+
Sbjct: 382 DALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLI 441

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MYS C                S+  W+SM+  Y  HG+     +LF+EM +  +     
Sbjct: 442 FMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHV 501

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + ++L++A SH GLVDEG +  N M   Y +    EH+ C VD+ GR+G+L +A E I++
Sbjct: 502 TFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIES 561

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P QP   VW  +L AC  HG+ ++   VA  LF  EP     Y+ LS+MY  LG W D 
Sbjct: 562 MPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDR 621

Query: 777 VEIGK 781
             + K
Sbjct: 622 ATVQK 626



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 260/597 (43%), Gaps = 38/597 (6%)

Query: 8   PTS-TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           PT    LLTAYS      ++  +F E  + D  +WN+++ A V              M  
Sbjct: 26  PTPWNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHA 84

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G+   +  L   + +       + G  +   S++ G+  +    +  +++YAKCG L  
Sbjct: 85  RGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGD 144

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F GM   + VSWN I++G   +  P + +  F EM   G   D  + +  +A  A 
Sbjct: 145 ARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAG 204

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
               S  + +H   +K  Y  +  +   N+ I+ YSQC  +  + + F G+  +D++SWN
Sbjct: 205 PRWYSLMRQLHGKIVK--YGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWN 262

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD-SLLLREGRSVHGYAI 305
           +++  +A +G  +EA      M     ++PD+ +  + IS+C++     ++GRS+H   I
Sbjct: 263 SMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVI 322

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM--NDLVSWNSMISG--------- 354
           +  L     + N+++  Y++       E  +N  + +   D VSWNSM++G         
Sbjct: 323 KFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSD 382

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
               F+ M     +     L A L SC+    L  G+ +H   ++ GF++N    ++L+ 
Sbjct: 383 ALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIF 442

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG L  A    +    +S    WN ++    Q+G  Q     F  M   +    D 
Sbjct: 443 MYSKCGVLGDARKSFEEADKSSSVP-WNSMMFGYAQHGQAQTVTDLFNEMLDLE-VPLDH 500

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL--------ITMYGRCRDIK 523
           VT V +I+A  +  L  EG  +       L  ++TR +  +        + +YGR   + 
Sbjct: 501 VTFVALITAYSHGGLVDEGSEI-------LNTMETRYKIPMRMEHYACGVDLYGRAGQLD 553

Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-EPNEISIVSILSA 578
            A  + ES  +  +   W  ++ A   +     A ++ RHL   EP + S   +LS+
Sbjct: 554 KAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSS 610



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++   S+SL+  YS       +   F E      V WN+M+    ++         F
Sbjct: 429 GFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLF 488

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSI--KAGMIADSSLCNVFVNMY 118
            EM++  +  D  T + +++A +    + +G  +++ +    K  M  +   C   V++Y
Sbjct: 489 NEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACG--VDLY 546

Query: 119 AKCGDLNSSECTFSGMHC-ADTVSWNTIMSGC-LHNN 153
            + G L+ ++     M    D + W T++  C +H N
Sbjct: 547 GRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGN 583


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/472 (32%), Positives = 248/472 (52%), Gaps = 32/472 (6%)

Query: 341 PMNDLVSWNSMISGLFKEMLYLCSQFSFSTL--LAILPS----------CNSPESLEFGK 388
           P  + VSW +++SGL + +++  +  +F+ +    + P+            +  +   G 
Sbjct: 2   PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 61

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            +HC  ++LGF       + L  MY  CG L  A  +  ++    D   W  +I    +N
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK-DAVAWTAMIDGYAKN 120

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  + A+ +F+ M ++     D     +V+SA G L+  +  KS+H    K+   L+  V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 509 QNALITMYGRCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLE 564
           +NALI MY +  D++SAS V +      N+ +   MI  + +      AL ++   R   
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            EPNE +  S++  C    +L  G Q+H  V       +SF+ S L+DMY  C       
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   +++ AW+++I+ +  HG G EAI+ F  M  SGIRP   + +SLL+ACSH+G
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVDEGL+Y+ +M E + + P+ EH+ CI+D  GR+G+L EAY+FI  +PI+P    W ++
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 420

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           L AC   G  ++G+  A+ L KLEP N G ++SLS +Y +LG+W+D   + K
Sbjct: 421 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRK 472



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 29/375 (7%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +HC+ ++ G   +  + +   +MY+KCG L+ +   F  M   D V+W  ++ G   N  
Sbjct: 63  LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122

Query: 155 PEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
            E  +L FR+M   G   AD     S ++AS  L +    K IH    K G+E    V+V
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELE--VAV 180

Query: 214 TNSLISMYSQCGDIEAAERAF------WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            N+LI MY++  D+E+A R        W     +VVS  ++IDG+      EEA  +  E
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGW-----NVVSGTSMIDGYIETDCVEEALVIYVE 235

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           ++  + VEP+  T  ++I  CA   LL +G  +H   I+  L  D  + ++L+D Y K  
Sbjct: 236 LR-RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAIL 375
            +S +  LFN I    D ++WN++I+              F  M+Y   + +    +++L
Sbjct: 295 LISLSMQLFNEIEYRTD-IAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 353

Query: 376 PSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+    ++ G K  +  +   G        + ++  Y   G L  A+  +  +    +
Sbjct: 354 TACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPN 413

Query: 435 TSCWNIVIVACTQNG 449
              W  ++ AC   G
Sbjct: 414 AYGWCSLLGACRMRG 428



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 159/361 (44%), Gaps = 20/361 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   L  +++L   YS       +  +F +   KD V W AMI    +N  +   +  F
Sbjct: 71  GFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSF 130

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVNMY 118
            +M  EG+        +  S L+    LK G   + +HC   KAG   + ++ N  ++MY
Sbjct: 131 RDMKREGLV--GADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMY 188

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTI-----MSGCLHNNYPEKCLLYFREMGWSGEQAD 173
           AK  D+ S+          D   WN +     + G +  +  E+ L+ + E+   G + +
Sbjct: 189 AKSMDVESASRVLK----IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 244

Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
             + SS +   A    L  G  +HA  IK       +V  T  L+ MY +CG I  + + 
Sbjct: 245 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST--LVDMYGKCGLISLSMQL 302

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  +  ++WNA+I+ FA +G   EA      M +   + P+    V+L++ C+ + L
Sbjct: 303 FNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRM-IYSGIRPNHIAFVSLLTACSHAGL 361

Query: 294 LREGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
           + EG   + Y+++   G +      + ++D Y ++  L +A    + +    +   W S+
Sbjct: 362 VDEGLK-YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 420

Query: 352 I 352
           +
Sbjct: 421 L 421



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 117/261 (44%), Gaps = 5/261 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFES-SLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           GF   +    +L+  Y+     ES S  L  +    +VV+  +MI   +E  CV   L  
Sbjct: 173 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVI 232

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + E+  +G+  +  T   ++        L+QG  +H   IK  +I DS + +  V+MY K
Sbjct: 233 YVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGK 292

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG ++ S   F+ +     ++WN +++    + +  + +  F  M +SG + ++++  S 
Sbjct: 293 CGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSL 352

Query: 181 VAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           + A +  G +  G K  +++    G E  P     + +I  Y + G ++ A +    M  
Sbjct: 353 LTACSHAGLVDEGLKYFYSMKEAHGIE--PKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 410

Query: 240 K-DVVSWNAIIDGFALNGKFE 259
           K +   W +++    + G  E
Sbjct: 411 KPNAYGWCSLLGACRMRGSKE 431


>gi|449451906|ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 209/740 (28%), Positives = 353/740 (47%), Gaps = 39/740 (5%)

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T+   +S       L  G  VH    K G   D+   N  + MY +CG +      F
Sbjct: 11  DPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGFKVF 70

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + VSW+ I+S    N   E CL  F EM   G      +  S + A A +    
Sbjct: 71  EEMPQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYG 130

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G  +H L  K+G E + +V    S +SMY++ GDI +AE  F  M   DV  WNA+I G
Sbjct: 131 FGSGVHCLSWKIGMEQNVFVG--GSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGG 188

Query: 252 FALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           +   G   EA   L+ + L+ S  ++ D  T+V+ +  C+    L  G+ +HG+ +RR L
Sbjct: 189 YTHCGLGLEA---LNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGL 245

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF--KEMLYLCSQFS 367
                 MN+LMD Y  S+  +    +FN++    D++SWN++  G    KE++ L  +F 
Sbjct: 246 -ISTAAMNALMDMYLISDRKNSVLKIFNSMQT-RDIISWNTVFGGSSNEKEIVDLFGKFV 303

Query: 368 FS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                    T   +   C        G       + LGF + T  +++++ M+   G + 
Sbjct: 304 IEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLME 363

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
              S+   +      S WN  I+A + N    EA +TF S+ +    + +    + + +A
Sbjct: 364 MVHSVFDSLVFKP-VSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETA 422

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C   E  +  + LH  ++K+  G    V  +LI  Y     ++S+  +F      ++ T+
Sbjct: 423 C-KFENPWMCRQLHCASMKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATY 481

Query: 541 NCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             +IS          A+     L     +P+E +  SIL+ C+        K IH  V  
Sbjct: 482 GAVISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCSSRAAYHQTKAIHSLVEK 541

Query: 598 LGFQENSFISSALLDMYS--------------NCKSN--AAWSSMISAYGYHGKGWEAIE 641
           +GF  +  ++SA++D Y+              +C+SN    ++SM+ AY +HG  WEAI+
Sbjct: 542 MGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQ 601

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
            F +M  + ++P+++S +S++SAC H GLV++G   +  M  +Y++ P  +++ C+VDML
Sbjct: 602 TFEKMRIAKVQPSQASFVSVISACRHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDML 661

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
            R+G L +A   I+++P  P P +  ++LS C  +G+ ++G+  AE L  L P+N+  ++
Sbjct: 662 SRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNVELGQWTAEKLLSLAPQNLATHV 721

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LS +Y     W+DA  I K
Sbjct: 722 LLSKVYSEGNSWEDAANIRK 741



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 161/689 (23%), Positives = 301/689 (43%), Gaps = 44/689 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF     +  +LL  Y    +      +F E   ++VV+W+ +I++  EN    + L  F
Sbjct: 42  GFDYDTFSMNNLLKMYFRCGFMCEGFKVFEEMPQRNVVSWSLIISSLSENGEFELCLESF 101

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+ +G+         ++ A   +     G  VHCLS K GM  +  +    ++MYA+ 
Sbjct: 102 LEMMRDGLMPTEFAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFVGGSTLSMYARL 161

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           GD+ S+E  F  M   D   WN ++ G  H     + L     +   G + DN ++ SAV
Sbjct: 162 GDITSAELVFEWMEKVDVGCWNAMIGGYTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAV 221

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + + +L  GK +H   ++ G   +   +  N+L+ MY       +  + F  M  +D
Sbjct: 222 KACSLIQDLDSGKELHGFILRRGLIST---AAMNALMDMYLISDRKNSVLKIFNSMQTRD 278

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           ++SWN +  G   +   +E  DL  +  ++  ++P+  T   L   C   L  R G    
Sbjct: 279 IISWNTVFGG---SSNEKEIVDLFGKF-VIEGMKPNHITFSVLFRQCGVLLDSRLGFQFF 334

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
             A+      +  +++S++  +S+   +     +F+++     + +WN  I         
Sbjct: 335 SLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSLV-FKPVSAWNQFILAYSSNSFE 393

Query: 362 LCSQFSFSTLLA------------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           + +  +FS+LL             I+ +    E+    + +HC  +K GF ++     +L
Sbjct: 394 MEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASMKAGFGSHKYVSCSL 453

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  YI  G L ++F +  ++    D + +  VI       +  EAI  F +   +    P
Sbjct: 454 IKCYILIGSLESSFEIFNQL-EIVDMATYGAVISTLVHQNYMYEAI-MFLNFLMESGKKP 511

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D  T  ++++ C +     + K++H L  K   G    V +A+I  Y +C DI SA   F
Sbjct: 512 DEFTFGSILNGCSSRAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAF 571

Query: 530 E-SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVL 585
           E SC + ++  +N M+ A++ +     A++ F   R  + +P++ S VS++SAC  +G++
Sbjct: 572 EQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACRHMGLV 631

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
             G+ +        FQ        +   Y+   S   +  ++     +G  ++A  +   
Sbjct: 632 EQGRSL--------FQ-------TMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIES 676

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEG 674
           M  S   P  + + SLLS C   G V+ G
Sbjct: 677 MPFS---PWPAILRSLLSGCRIYGNVELG 702


>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 688

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 196/657 (29%), Positives = 304/657 (46%), Gaps = 77/657 (11%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A +     G  IHA   K G  +  +++  N+LISMY++  ++  AE+ F  MT +++V+
Sbjct: 14  ATVRAFKRGNAIHAYLRKFGGLNDVFLA--NNLISMYAEFFNVRDAEKVFDEMTDRNIVT 71

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  ++  F   G+  EA  L ++M   +S  P+      ++  C     L  G+ +    
Sbjct: 72  WTTMVSAFTDGGRPYEAIRLYNDMP--KSETPNGYMYSAVLKACGFVGDLGLGKLIQERI 129

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA------------------------ 340
               L  D ++MNSLMD + K  SL+ A  +F+ I+                        
Sbjct: 130 YEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAE 189

Query: 341 ------PMNDLVSWNSMISGL----------FKEMLY----LCSQFSFSTLLAILPSCNS 380
                 P  ++VSWNSMI+G           F  M++        F+F   L I    ++
Sbjct: 190 KLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKI----SA 245

Query: 381 PESLEF-GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL-QRISHNSDTS-- 436
              L F GK +H +  KLG+ ++   ++AL+ MY NC DL+ A  L  Q  S N+  S  
Sbjct: 246 LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDN 305

Query: 437 --CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN ++     N   Q A+    S      A  DS T    +  C NL     G  LH
Sbjct: 306 LALWNSMLSGYVINNCDQAALNLL-SEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLH 364

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           GL +     LD  V + L+ +Y +  +I  A  +F      ++  W+ +I   +Q     
Sbjct: 365 GLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNW 424

Query: 555 RALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A  +F+ +    NEI    I +IL  C+ L  LR GKQ+H      G++   F  ++LL
Sbjct: 425 LAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMYS C               K   +W+ +I   G +GK  EA+  FHEM  SGI P + 
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + + +LSAC ++GLV+E    +N+M   Y + P  EH+ C+VD+L   G  +EA + I N
Sbjct: 545 TFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIAN 604

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +P +P    W  +L AC    DTK+  +VA+ L +  P +   Y++LSN Y +LG W
Sbjct: 605 MPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLSNAYASLGMW 661



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 276/626 (44%), Gaps = 85/626 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +  + +L++ Y+       +  +F E  ++++VTW  M++A  +       +  +
Sbjct: 33  GGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLY 92

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +     +      ++ A   +  L  G+++     +  + AD+ L N  ++M+ KC
Sbjct: 93  NDMPKSETP-NGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKC 151

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG---------------CLH--------------- 151
           G LN +   F  +  A T +WN I+SG               C+                
Sbjct: 152 GSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFA 211

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           +N  ++ L +   M     + D+ +   A+  SA  G L  GK +H+   KLGYE S + 
Sbjct: 212 DNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCF- 270

Query: 212 SVTNSLISMYSQCGD-IEAAE-----RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
              ++LI MYS C D IEA +      +F      ++  WN+++ G+ +N   + A +LL
Sbjct: 271 -TLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLL 329

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            E+    ++  D  T    + +C + L  R G  +HG  +      D ++ + L+D Y+K
Sbjct: 330 SEIHCSGAL-LDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAK 388

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             ++  A  +F+ + P  D+++W+ +I G            +FK ML L ++     +  
Sbjct: 389 LANIDDALAIFHRL-PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVIST 447

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           IL  C++  SL  GK +H   +K G+      + +L+ MY  CG++  A +L        
Sbjct: 448 ILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC-CEQEK 506

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   W  +IV C QNG   EA++ F  M  +   +P+ +T + V+SAC    L  E +S+
Sbjct: 507 DIVSWTGIIVGCGQNGKAAEAVRFFHEMI-RSGITPNEITFLGVLSACRYAGLVEEARSI 565

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
              ++KS+ GL+  +++                             + CM+   +     
Sbjct: 566 FN-SMKSVYGLEPHLEH-----------------------------YCCMVDLLASVGLP 595

Query: 554 VRALELFRHLEFEPNEISIVSILSAC 579
             A +L  ++ FEPN+ +  ++L AC
Sbjct: 596 EEAEKLIANMPFEPNQTTWRTLLGAC 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 243/561 (43%), Gaps = 66/561 (11%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +   K+G  +H    K G + D  L N  ++MYA+  ++  +E  F  M   + V+W T+
Sbjct: 16  VRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTM 75

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S       P + +  + +M  S E  +    S+ + A   +G+L  GK+I     +  Y
Sbjct: 76  VSAFTDGGRPYEAIRLYNDMPKS-ETPNGYMYSAVLKACGFVGDLGLGKLIQ----ERIY 130

Query: 206 EDSPYVS--VTNSLISMYSQCGDIE-------------------------------AAER 232
           ED       + NSL+ M+ +CG +                                 AE+
Sbjct: 131 EDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEK 190

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M   +VVSWN++I GFA NG  + A + +  M   R ++ D  T    + + A   
Sbjct: 191 LFHCMPHPNVVSWNSMIAGFADNGS-QRALEFVSMMH-KRCIKLDDFTFPCALKISALHG 248

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-----DL 345
           LL  G+ VH Y  +  LGY+     +++L+D YS  N L +A  LF+  +  N     +L
Sbjct: 249 LLFIGKQVHSYVTK--LGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 346 VSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCW 393
             WNSM+SG       +  L L S+   S       T    L  C +  S   G  +H  
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            +  G+  + +  + L+ +Y    ++  A ++  R+    D   W+ +I+ C Q G    
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRK-DIIAWSGLIMGCAQIGLNWL 425

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A   FK M +  N   D   +  ++  C NL     GK +H L +KS   ++     +L+
Sbjct: 426 AFSMFKGMLELVN-EIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            MY +C +I+ A T+F      ++ +W  +I    QN     A+  F  +      PNEI
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 571 SIVSILSACTQLGVLRHGKQI 591
           + + +LSAC   G++   + I
Sbjct: 545 TFLGVLSACRYAGLVEEARSI 565



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 194/497 (39%), Gaps = 99/497 (19%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L  C +  + + G +IH +  K G  N+    N L+ MY    ++  A  +   ++ + +
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT-DRN 68

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              W  ++ A T  G   EAI+ +  M + +  +P+      V+ ACG +     GK + 
Sbjct: 69  IVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE--TPNGYMYSAVLKACGFVGDLGLGKLIQ 126

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
               +  +  DT + N+L+ M+ +C  +  A  VF +       TWN ++S +S+    V
Sbjct: 127 ERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMV 186

Query: 555 RALELFRHLEFEPNEISIVSILSA-------------------CTQL------------- 582
            A +LF H    PN +S  S+++                    C +L             
Sbjct: 187 EAEKLF-HCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISA 245

Query: 583 --GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--------------NAA---- 622
             G+L  GKQ+H +V  LG++ + F  SAL+DMYSNC                NA+    
Sbjct: 246 LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDN 305

Query: 623 ---WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              W+SM+S Y  +     A+ L  E+  SG      +    L  C +      GLQ + 
Sbjct: 306 LALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHG 365

Query: 680 NMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPG------------- 724
            ++       E ++ V   +VD+  +   + +A      LP +                 
Sbjct: 366 LIVT---CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGL 422

Query: 725 ---------------------VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI-S 762
                                V   +L  CS+    + GKQV  L  K   E  G+ I S
Sbjct: 423 NWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITS 482

Query: 763 LSNMYVALGRWKDAVEI 779
           L +MY   G  +DA+ +
Sbjct: 483 LLDMYSKCGEIEDALTL 499



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 26/200 (13%)

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
           I   L  C  +   + G  IH ++   G   + F+++ L+ MY+                
Sbjct: 6   IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL- 675
            ++   W++M+SA+   G+ +EAI L+++M  S   P      ++L AC   G  D GL 
Sbjct: 66  DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVG--DLGLG 122

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           +     + E  ++ +T     ++DM  + G L +A E   N+  +     W  ++S    
Sbjct: 123 KLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTTWNIIVS---- 177

Query: 736 HGDTKMGKQV-AELLFKLEP 754
            G +K G  V AE LF   P
Sbjct: 178 -GYSKAGLMVEAEKLFHCMP 196


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/545 (31%), Positives = 284/545 (52%), Gaps = 46/545 (8%)

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           R +  D   V +L++ C     L EGR +H + I      D+ +  +L+  Y+K  SL  
Sbjct: 4   RGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDD 63

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A+ +F  +  + DL +W+S+IS             L++ M+    + +  T    L  C 
Sbjct: 64  AKRVFEGM-EIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCA 122

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S   L  G++IH   L      + +  ++L++MY+ C ++V A  + + +   +  S + 
Sbjct: 123 SVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS-YT 181

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG- 495
            +I A  Q G   EA++ F  M++ +   P++ T   ++ A    GNLE   +G+ +H  
Sbjct: 182 AMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLE---KGRKVHRH 238

Query: 496 LALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
           LA +   G DT V  QNAL+TMYG+C     A  VF+S    N+ +W  MI+A++Q+   
Sbjct: 239 LASR---GFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNP 295

Query: 554 VRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF--HLGFQENSFISSALL 611
             AL LF+ ++ EP+ +S  S L+AC  LG L  G++IH  V   HL   +   + ++LL
Sbjct: 296 QEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ---METSLL 352

Query: 612 DMYSNC-------------KSNAAWS--SMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
            MY+ C             K+  A+S  +MI+A+  HG+  +A+ ++  M   GI     
Sbjct: 353 SMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGI 412

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + +S+L ACSH+ LV +   ++ +++ ++ V P  EH++C+VD+LGRSG+L +A E ++ 
Sbjct: 413 TFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVET 472

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P Q     W  +LS C  HGD   G++ A  +F+L P     Y+ LSNMY A  R+ DA
Sbjct: 473 MPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDA 532

Query: 777 VEIGK 781
             + K
Sbjct: 533 RRVRK 537



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 265/569 (46%), Gaps = 56/569 (9%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M E GI  D   +  +V+A T++  L++GR +H   I  G   D  L    + MYAKCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L+ ++  F GM   D  +W++I+S        E  ++ +R M   G + + V+ + A+  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 184 SACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A +  L+ G+ IH   L  K+  +D     + +SL++MY +C ++  A + F GM  ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDD----VLQDSLLNMYLKCDEMVEARKVFEGMKARN 176

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V S+ A+I  +   G+  EA +L   M  + ++EP+  T  T++        L +GR VH
Sbjct: 177 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            +   R    ++++ N+L+  Y K  S  +A  +F+++   N ++SW SMI+        
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN-VISWTSMIAAYAQHGNP 295

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LFK M    S  SFS+    L +C    +L+ G+ IH   ++   ++  +   +L
Sbjct: 296 QEALNLFKRMDVEPSGVSFSS---ALNACALLGALDEGREIHHRVVEAHLASPQME-TSL 351

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG L  A  +  R+      SC N +I A TQ+G  ++A++ ++ M +Q+    
Sbjct: 352 LSMYARCGSLDDARRVFNRMKTRDAFSC-NAMIAAFTQHGRKKQALRIYRRM-EQEGIPA 409

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           D +T V+V+ AC +  L  +                             CRD    S V 
Sbjct: 410 DGITFVSVLVACSHTSLVAD-----------------------------CRDFFQ-SLVM 439

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
           +      +  + CM+    ++     A EL   + ++ + ++ +++LS C + G L  G+
Sbjct: 440 DHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGE 499

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCK 618
           +    VF L   E +     L +MY+  K
Sbjct: 500 RAARKVFELAPAE-TLPYVFLSNMYAAAK 527



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 209/484 (43%), Gaps = 42/484 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +P  T+LL  Y+     + +  +F     KD+  W+++I+A        M +  +
Sbjct: 40  GFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLY 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+ EG+  +  T    +     +  L  GR +H   + + +  D  L +  +NMY KC
Sbjct: 100 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 159

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            ++  +   F GM   +  S+  ++S  +    + E   L+ R       + +  + ++ 
Sbjct: 160 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 219

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A   LG L  G+ +H      G++ +  V V N+L++MY +CG    A + F  MT +
Sbjct: 220 LGAVEGLGNLEKGRKVHRHLASRGFDTN--VVVQNALVTMYGKCGSPVEARKVFDSMTAR 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V+SW ++I  +A +G  +EA +L   M     VEP   +  + ++ CA    L EGR +
Sbjct: 278 NVISWTSMIAAYAQHGNPQEALNLFKRM----DVEPSGVSFSSALNACALLGALDEGREI 333

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           H   +   L     M  SL+  Y++  SL  A  +FN +    D  S N+MI+     G 
Sbjct: 334 HHRVVEAHLASP-QMETSLLSMYARCGSLDDARRVFNRM-KTRDAFSCNAMIAAFTQHGR 391

Query: 356 FKEMLYLCSQFSFS-------TLLAILPSCNS----PESLEFGKSIHCWQLKLGFSNNTI 404
            K+ L +  +           T +++L +C+      +  +F +S+              
Sbjct: 392 KKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDH---------- 441

Query: 405 GVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GV  L+  Y+         G L  A  L++ + + +D   W  ++  C ++G      + 
Sbjct: 442 GVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERA 501

Query: 458 FKSM 461
            + +
Sbjct: 502 ARKV 505



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 31/340 (9%)

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
           +++    D   + ++++AC  L+   EG+ LH   + +    D  ++ AL+ MY +C  +
Sbjct: 2   EERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSL 61

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
             A  VFE     +L  W+ +ISA+++      A+ L+R +     EPN ++    L  C
Sbjct: 62  DDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGC 121

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWS 624
             +  L  G+ IH  +      ++  +  +LL+MY  C               ++  +++
Sbjct: 122 ASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYT 181

Query: 625 SMISAYGYHGKGWEAIELFHEMCN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +MISAY   G+  EA+ELF  M     I P   +  ++L A    G +++G + + ++  
Sbjct: 182 AMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLAS 241

Query: 684 E-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
             +D     ++   +V M G+ G   EA +   ++  +     W +M++A + HG+    
Sbjct: 242 RGFDTNVVVQN--ALVTMYGKCGSPVEARKVFDSMTARNVIS-WTSMIAAYAQHGNP--- 295

Query: 743 KQVAELLFK---LEPENVGYYISLSNMYVALGRWKDAVEI 779
            Q A  LFK   +EP  V +  +L N    LG   +  EI
Sbjct: 296 -QEALNLFKRMDVEPSGVSFSSAL-NACALLGALDEGREI 333



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF  ++    +L+T Y        +  +F     ++V++W +MI A  ++      L+ 
Sbjct: 242 RGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNL 301

Query: 61  FGEMVEE--GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           F  M  E  G+ F S      ++A   +  L +GR +H   ++A  +A   +    ++MY
Sbjct: 302 FKRMDVEPSGVSFSSA-----LNACALLGALDEGREIHHRVVEA-HLASPQMETSLLSMY 355

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           A+CG L+ +   F+ M   D  S N +++    +   ++ L  +R M   G  AD ++  
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFV 415

Query: 179 SAVAA 183
           S + A
Sbjct: 416 SVLVA 420


>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
 gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 280/535 (52%), Gaps = 39/535 (7%)

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG-YDLLMMNSLMDFYSKSNSLSKA 332
           V  D  T   L+  CA    L  GR+VH  AIR      D  +  +++  Y++   +  A
Sbjct: 93  VRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGA 152

Query: 333 ELLFNAIAPMN--DLVSWNSMISG-----LFKEMLYLCSQ--------FSFSTLLAILPS 377
               NA   +   D+V   S+++G     + +E L   ++         +  TL++ + +
Sbjct: 153 ---INAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSA 209

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                 +  G++ H + ++     +   VN ++  Y+  GD  A+  L + ++ + D   
Sbjct: 210 AAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMT-DRDVIT 268

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W+ +I    Q+G   E ++ ++ M + +   P+SVTLV+V+ AC  +  A EGK +H +A
Sbjct: 269 WSCMIKGYVQHGDAHEGLRMYREMVKAR-VQPNSVTLVSVLQACALVVDAEEGKRVHRVA 327

Query: 498 LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRAL 557
           +     L+  V  AL+ MY +C   + A  +F      ++  W  +I   +QN+    +L
Sbjct: 328 VSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESL 387

Query: 558 ELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY 614
            +F+ +  +   P+ I++V +L+AC++ G  R    +HG++   GF  N+F+++ALLD+Y
Sbjct: 388 HVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLY 447

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           S C               K    W SMI+ YG HG G EA+ L+  M  S I+P   + +
Sbjct: 448 SKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFV 507

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           S+LSACSHSGLV EG+Q +++M + + V P  EH   +VD+LGR+G+LQEA  FI+ +  
Sbjct: 508 SVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDG 567

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +     W A+L+AC  H +TKM K  A+ L KL+P++VGYY  L+N+Y    +W+
Sbjct: 568 RAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWE 622



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 266/529 (50%), Gaps = 29/529 (5%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSS 127
           +R D  T  +++ A   +  L  GR VH ++I++   + D+ +    V MYA+CGD+  +
Sbjct: 93  VRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGA 152

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASAC 186
              +  +   D V   ++++G   N   E+ L +F R +   G     V+L SA++A+A 
Sbjct: 153 INAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQ 212

Query: 187 LGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           LG +  G+  HA  ++  LGY+    +++ N+++S Y + GD +A+ R F GMT +DV++
Sbjct: 213 LGHVRKGQACHAYVVRNSLGYD----LALVNTVLSFYVKIGDFQASMRLFEGMTDRDVIT 268

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W+ +I G+  +G   E   +  EM   R V+P+  T+V+++  CA  +   EG+ VH  A
Sbjct: 269 WSCMIKGYVQHGDAHEGLRMYREMVKAR-VQPNSVTLVSVLQACALVVDAEEGKRVHRVA 327

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--------- 355
           +      ++ +  +L+D Y K +   +A  LF+ + P  D+V+W ++I GL         
Sbjct: 328 VSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRM-PKKDVVAWAAVIGGLTQNELPGES 386

Query: 356 ---FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
              FK ML         T++ +L +C+          +H + ++ GF+NN     AL+ +
Sbjct: 387 LHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDL 446

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  CGD+ +A  + +  +   D   W  +I     +G  QEA+  ++ M    +  P+SV
Sbjct: 447 YSKCGDIDSAVRVFEGTT-EKDIVVWGSMIAGYGAHGLGQEAVALYQRMI-ASSIQPNSV 504

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGL--DTRVQNALITMYGRCRDIKSASTVFE 530
           T V+V+SAC +  L  EG  +   ++  + G+  +   Q+A++ + GR  +++ A     
Sbjct: 505 TFVSVLSACSHSGLVQEGIQIFD-SMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIR 563

Query: 531 SCYNCNLC-TWNCMISAFSQ-NKAEVRALELFRHLEFEPNEISIVSILS 577
                 +  TW  +++A  + N  ++  +     L+ +P+ +   ++L+
Sbjct: 564 GMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLT 612



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 226/459 (49%), Gaps = 24/459 (5%)

Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAA 230
           D  + S  + A A L  L++G+ +HA+ I+     ED+    V  +++ MY++CGD+  A
Sbjct: 96  DGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDA---FVATAIVQMYARCGDMVGA 152

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
             A+  +   D+V   +++ G+  NG  EEA +      + + V     T+V+ +S  A 
Sbjct: 153 INAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQ 212

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              +R+G++ H Y +R  LGYDL ++N+++ FY K      +  LF  +    D+++W+ 
Sbjct: 213 LGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTD-RDVITWSC 271

Query: 351 MISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MI G            +++EM+    Q +  TL+++L +C      E GK +H   + +G
Sbjct: 272 MIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIG 331

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
                    AL+ MY+ C     A  L  R+    D   W  VI   TQN    E++  F
Sbjct: 332 CELEVGVATALVDMYMKCSCHEEAMCLFHRMP-KKDVVAWAAVIGGLTQNELPGESLHVF 390

Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
           K M    +  PD++T+V V++AC           LHG  +++    +  V  AL+ +Y +
Sbjct: 391 KCMLLDDHV-PDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSK 449

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSI 575
           C DI SA  VFE     ++  W  MI+ +  +     A+ L++ +     +PN ++ VS+
Sbjct: 450 CGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSV 509

Query: 576 LSACTQLGVLRHGKQIHGHVFHL-GFQENSFISSALLDM 613
           LSAC+  G+++ G QI   +  + G   N+   SA++D+
Sbjct: 510 LSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDL 548



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 224/485 (46%), Gaps = 21/485 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE-MVEE 67
            +T+++  Y+       ++  +      D+V   +++T   +N      L FF   +V +
Sbjct: 135 VATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQ 194

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G+     TL+  +SA  Q+  +++G+  H   ++  +  D +L N  ++ Y K GD  +S
Sbjct: 195 GVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQAS 254

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F GM   D ++W+ ++ G + +    + L  +REM  +  Q ++V+L S + A A +
Sbjct: 255 MRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALV 314

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            +   GK +H + + +G E    V V  +L+ MY +C   E A   F  M  KDVV+W A
Sbjct: 315 VDAEEGKRVHRVAVSIGCELE--VGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAA 372

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G   N    E+  +   M L   V PD  T+V +++ C++    R    +HGY +R 
Sbjct: 373 VIGGLTQNELPGESLHVFKCMLLDDHV-PDAITMVKVLAACSEFGGTRLAICLHGYLVRN 431

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               +  +  +L+D YSK   +  A  +F       D+V W SMI+G            L
Sbjct: 432 GFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTE-KDIVVWGSMIAGYGAHGLGQEAVAL 490

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYI 414
           ++ M+    Q +  T +++L +C+    ++ G  I     ++ G   N    +A++ +  
Sbjct: 491 YQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLG 550

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G+L  A   ++ +   +    W  ++ AC ++ + + +    KS+ +     PD V  
Sbjct: 551 RAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLK---LDPDHVGY 607

Query: 475 VNVIS 479
            N+++
Sbjct: 608 YNLLT 612



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 29/240 (12%)

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHG-HVFHLG 599
           N ++ A  + +    A+ L   L    +  +   +L AC  L  L HG+ +H   +    
Sbjct: 69  NALLRAHIRARQWRAAILLGPRLRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCT 128

Query: 600 FQENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELF- 643
             E++F+++A++ MY+ C                     +S+++ Y  +G   EA+E F 
Sbjct: 129 ASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFA 188

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML-- 701
             +   G+  T  +++S +SA +  G V +G          Y VR    + + +V+ +  
Sbjct: 189 RNVVGQGVMLTPVTLVSAMSAAAQLGHVRKG-----QACHAYVVRNSLGYDLALVNTVLS 243

Query: 702 --GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENV 757
              + G  Q +    + +  +     W  M+     HGD   G ++   + K  ++P +V
Sbjct: 244 FYVKIGDFQASMRLFEGMTDRDVI-TWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSV 302



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   + +LL  YS     +S++ +F  T  KD+V W +MI     +      +  +
Sbjct: 432 GFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALY 491

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M+   I+ +S T + ++SA +    +++G ++   ++   G++ ++   +  V++  +
Sbjct: 492 QRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGR 551

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGCL-HNN 153
            G+L  +     GM   A   +W  +++ C  HNN
Sbjct: 552 AGELQEAIRFIRGMDGRAVAHTWCALLAACREHNN 586


>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
 gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
 gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 794

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 314/636 (49%), Gaps = 59/636 (9%)

Query: 190 LSYGKVIHALGIKLGY---EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L   + IHAL +  G     +SPY +  N+LISMY +CG +E A + F  M  ++VVS+N
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYAN--NNLISMYVRCGSLEQARKVFDKMPHRNVVSYN 167

Query: 247 AIIDGFALNGKFEE-AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           A+   ++ N  F   AF L   M     V+P+ +T  +L+ +CA    +  G S++   I
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAF-EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226

Query: 306 RRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
           +  LGY  ++++  S++  YS    L  A  +F+ +    D V+WN+MI G         
Sbjct: 227 K--LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN-RDAVAWNTMIVGSLKNDKIED 283

Query: 355 ---LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
               F+ ML      +QF++S    +L  C+   S   GK IH   +      +    NA
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSI---VLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ MY +CGD+  AF +  RI HN +   WN +I  C++NG  ++A+  ++ + +     
Sbjct: 341 LLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           PD  T    ISA    E    GK LHG   K        V   L++MY + R+ +SA  V
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVL 585
           F+     ++  W  MI   S+      A++ F  +  E N     S+ S++ AC+ + +L
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISAY 630
           R G+  H      GF     +  AL+DMY  N K   A              W+SM+ AY
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             HG   +A+  F ++  +G  P   + +SLL+ACSH G   +G ++  N ++E  ++  
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAG 638

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-----VWGAMLSACSHHGDTKMGKQV 745
            +H+ C+V+++ ++G + EA E I+  P    PG     +W  +LSAC +  + ++G   
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSP----PGNNQAELWRTLLSACVNTRNLQIGLYA 694

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           AE + KL+PE+   +I LSN+Y   GRW+D  E+ +
Sbjct: 695 AEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 265/572 (46%), Gaps = 53/572 (9%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS---WNAIIDGFALNGKFEEAFDLL 265
           PY +  N+LISMY +C  +E A + F  M  +++V+    +A+ +  ++          L
Sbjct: 22  PYAN--NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL 79

Query: 266 HEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLM 320
              Q++    +    ++VV L   C    +L+  R +H   +    G         N+L+
Sbjct: 80  GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA------- 373
             Y +  SL +A  +F+ + P  ++VS+N++ S   +   +    F  +T +A       
Sbjct: 140 SMYVRCGSLEQARKVFDKM-PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198

Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
                 ++  C   E +  G S++   +KLG+S+N +   +++ MY +CGDL +A  +  
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            + +N D   WN +IV   +N   ++ +  F++M       P   T   V++ C  L   
Sbjct: 259 CV-NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML-MSGVDPTQFTYSIVLNGCSKLGSY 316

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             GK +H   + S    D  + NAL+ MY  C D++ A  VF   +N NL +WN +IS  
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376

Query: 548 SQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
           S+N    +A+ ++R L       P+E +  + +SA  +     HGK +HG V  LG++ +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436

Query: 604 SFISSALLDMY-SNCKSNAA--------------WSSMISAYGYHGKGWEAIELFHEMCN 648
            F+ + LL MY  N ++ +A              W+ MI  +   G    A++ F EM  
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496

Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVC--IVDMLGRSG 705
              R    S+ S++ ACS   ++ +G  ++   +   +D        VC  +VDM G++G
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC----VMSVCGALVDMYGKNG 552

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           K + A E I +L   P    W +ML A S HG
Sbjct: 553 KYETA-ETIFSLASNPDLKCWNSMLGAYSQHG 583



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 253/527 (48%), Gaps = 36/527 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++   TS+L  YS+    ES+  +F    N+D V WN MI   ++N  +  GL FF
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G+     T  I+++  +++     G+++H   I +  +AD  L N  ++MY  C
Sbjct: 289 RNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSC 348

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNVSLSSA 180
           GD+  +   F  +H  + VSWN+I+SGC  N + E+ +L +R  +  S  + D  + S+A
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A+A      +GK++H    KLGYE S +V  T  L+SMY +  + E+A++ F  M  +
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT--LLSMYFKNREAESAQKVFDVMKER 466

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           DVV W  +I G +  G  E A     EM   ++   D  ++ ++I  C+D  +LR+G   
Sbjct: 467 DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVF 525

Query: 301 HGYAIRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
           H  AIR   G+D +M    +L+D Y K+     AE +F ++A   DL  WNSM+      
Sbjct: 526 HCLAIR--TGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQH 582

Query: 354 GLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQ------LKLGFS 400
           G+ ++ L    Q           T L++L +C+   S   GK +  W       +K GF 
Sbjct: 583 GMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL--WNQMKEQGIKAGFK 640

Query: 401 NNTIGVNALMHMYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           + +  VN    +    G +  A  L+ Q    N+    W  ++ AC    + Q  +   +
Sbjct: 641 HYSCMVN----LVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAE 696

Query: 460 SMTQ-QQNASPDSVTLVNVISACGNLE-LAFEGKSLHGLALKSLMGL 504
            + +     +   + L N+ +  G  E +A   + + GLA     GL
Sbjct: 697 QILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGL 743



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 237/500 (47%), Gaps = 24/500 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-MGLHFFGEMVEEG 68
           + +L++ Y      E +  +F +  +++VV++NA+ +A   N             M  E 
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ +S+T   +V     +  +  G  ++   IK G   +  +    + MY+ CGDL S+ 
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  ++  D V+WNT++ G L N+  E  L++FR M  SG      + S  +   + LG
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314

Query: 189 ELSYGKVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             S GK+IHA + +     D P   + N+L+ MY  CGD+  A   F  +   ++VSWN+
Sbjct: 315 SYSLGKLIHARIIVSDSLADLP---LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II G + NG  E+A  +   +  M +  PD  T    IS  A+      G+ +HG   + 
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK- 430

Query: 308 LLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
            LGY+  + +  +L+  Y K+     A+ +F+ +    D+V W  MI G           
Sbjct: 431 -LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE-RDVVLWTEMIVGHSRLGNSELAV 488

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
             F EM    ++    +L +++ +C+    L  G+  HC  ++ GF        AL+ MY
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G    A ++   ++ N D  CWN ++ A +Q+G  ++A+  F+ +  +    PD+VT
Sbjct: 549 GKNGKYETAETIFS-LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL-ENGFMPDAVT 606

Query: 474 LVNVISACGNLELAFEGKSL 493
            +++++AC +     +GK L
Sbjct: 607 YLSLLAACSHRGSTLQGKFL 626


>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g19720; AltName: Full=Protein DYW7
 gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
 gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 894

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 205/744 (27%), Positives = 346/744 (46%), Gaps = 111/744 (14%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV-----NMY 118
           + ++G +   +T L ++ +      +  GR++H    + G+  +    +VFV     +MY
Sbjct: 72  LFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEP---DVFVETKLLSMY 125

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AKCG +  +   F  M   +  +W+ ++      N   +    FR M   G   D+    
Sbjct: 126 AKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFP 185

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +   A  G++  GKVIH++ IKLG   S  + V+NS++++Y++CG+++ A + F  M 
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGM--SSCLRVSNSILAVYAKCGELDFATKFFRRMR 243

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DV++WN+++  +  NGK EEA +L+ EM+    + P + T   LI             
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEME-KEGISPGLVTWNILIG------------ 290

Query: 299 SVHGYAIRRLLGYDLL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
                      GY+ L   ++ MD   K  +       F   A   D+ +W +MISGL  
Sbjct: 291 -----------GYNQLGKCDAAMDLMQKMET-------FGITA---DVFTWTAMISGLIH 329

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F++M       +  T+++ + +C+  + +  G  +H   +K+GF ++ + 
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N+L+ MY  CG L  A  +   +  N D   WN +I    Q G+  +A + F  M Q  
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRM-QDA 447

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N  P+ +T   +IS  G ++   EG+++    L   M  D +VQ                
Sbjct: 448 NLRPNIITWNTMIS--GYIKNGDEGEAMD---LFQRMEKDGKVQR--------------- 487

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
                     N  TWN +I+ + QN  +  ALELFR ++F    PN ++I+S+L AC  L
Sbjct: 488 ----------NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMI 627
              +  ++IHG V          + +AL D Y+                 K    W+S+I
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
             Y  HG    A+ LF++M   GI P + ++ S++ A    G VDEG + + ++  +Y +
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHI 657

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
            P  EH   +V + GR+ +L+EA +FI+ + IQ +  +W + L+ C  HGD  M    AE
Sbjct: 658 IPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717

Query: 748 LLFKLEPENVGYYISLSNMYVALG 771
            LF LEPEN      +S +Y ALG
Sbjct: 718 NLFSLEPENTATESIVSQIY-ALG 740



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 185/714 (25%), Positives = 312/714 (43%), Gaps = 106/714 (14%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGI 69
           T LL+ Y+       +  +F     +++ TW+AMI A   ENR   +    F  M+++G+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA-KLFRLMMKDGV 177

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D      I+        ++ G+V+H + IK GM +   + N  + +YAKCG+L+ +  
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D ++WN+++     N   E+ +   +EM   G                    
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG-------------------- 277

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA-----ERAFWGMTCKDVVS 244
                             SP +   N LI  Y+Q G  +AA     +   +G+T  DV +
Sbjct: 278 -----------------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA-DVFT 319

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W A+I G   NG   +A D+  +M  +  V P+  T+++ +S C+   ++ +G  VH  A
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKM-FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           ++     D+L+ NSL+D YSK   L  A  +F+++    D+ +WNSMI+G + +  Y   
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITG-YCQAGYCGK 436

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
            +   T +                             N I  N ++  YI  GD   A  
Sbjct: 437 AYELFTRMQ----------------------DANLRPNIITWNTMISGYIKNGDEGEAMD 474

Query: 425 LLQRISHNS----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           L QR+  +     +T+ WN++I    QNG   EA++ F+ M Q     P+SVT+++++ A
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM-QFSRFMPNSVTILSLLPA 533

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C NL  A   + +HG  L+  +     V+NAL   Y +  DI+ + T+F      ++ TW
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I  +  + +   AL LF  ++ +   PN  ++ SI+ A   +G +  GK+    VF+
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK----VFY 649

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
                +  I  AL     +C      S+M+  YG   +  EA++   EM    I+     
Sbjct: 650 -SIANDYHIIPAL----EHC------SAMVYLYGRANRLEEALQFIQEM---NIQSETPI 695

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM-------LGRS 704
             S L+ C   G +D  +    N+   + + PE      IV         LGRS
Sbjct: 696 WESFLTGCRIHGDIDMAIHAAENL---FSLEPENTATESIVSQIYALGAKLGRS 746



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 210/482 (43%), Gaps = 71/482 (14%)

Query: 37  DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
           DV TW AMI+  + N      L  F +M   G+  ++ T++  VSA + +  + QG  VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375

Query: 97  CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
            +++K G I D  + N  V+MY+KCG L  +   F  +   D  +WN++++G     Y  
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           K    F  M     Q  N+                                 P +   N+
Sbjct: 436 KAYELFTRM-----QDANL--------------------------------RPNIITWNT 458

Query: 217 LISMYSQCGDIEAAERAFW-----GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           +IS Y + GD   A   F      G   ++  +WN II G+  NGK +EA +L  +MQ  
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
           R + P+  T+++L+  CA+ L  +  R +HG  +RR L     + N+L D Y+KS  +  
Sbjct: 519 RFM-PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           +  +F  +    D+++WNS+I G            LF +M       +  TL +I+ +  
Sbjct: 578 SRTIFLGME-TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMH------MYINCGDLVAAFSLLQRISHNS 433
              +++ GK +         +N+   + AL H      +Y     L  A   +Q ++  S
Sbjct: 637 LMGNVDEGKKVF-----YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           +T  W   +  C  +G    AI   +++   +  +  + ++V+ I A G    A  G+SL
Sbjct: 692 ETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALG----AKLGRSL 747

Query: 494 HG 495
            G
Sbjct: 748 EG 749



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 8/275 (2%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            ++  TWN +I   ++N      L  F +M       +S T+L ++ A   +   K  R 
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNN 153
           +H   ++  + A  ++ N   + YAK GD+  S   F GM   D ++WN+++ G  LH +
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           Y    L  F +M   G   +  +LSS + A   +G +  GK +    I   Y   P +  
Sbjct: 606 YG-PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEH 663

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
            ++++ +Y +   +E A +    M  + +   W + + G  ++G  + A   +H  + + 
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA---IHAAENLF 720

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           S+EP+     +++S    +L  + GRS+ G   RR
Sbjct: 721 SLEPENTATESIVSQIY-ALGAKLGRSLEGNKPRR 754


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 181/625 (28%), Positives = 307/625 (49%), Gaps = 43/625 (6%)

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G+L  G+ IHA   KLGY++  +    N+L+++Y +   +  A+  F  M  ++ ++W  
Sbjct: 92  GDLMLGQAIHAFLAKLGYQNDAFRG--NNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTT 149

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G       E  F +  EM  +   E +  T   ++  C     L  G  +HG+ I+R
Sbjct: 150 LIKGHLQVNDVESVFRIAREMYWVGE-EFNEHTCSVILQACDSLENLVRGEQIHGFVIKR 208

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GL 355
               D+ +  SL+  YS+   L  AE +++ +A   D+   N MIS            G+
Sbjct: 209 GFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLA-YKDVRCLNFMISEYGKAGCGEKAIGV 267

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F  +L    + +  T   ++ +CN    +E  + +H   +K G  +     NA++ +Y+ 
Sbjct: 268 FLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVK 327

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---V 472
            G L  A      +   +  S W  ++    +NG+ ++A++ F S   +     DS    
Sbjct: 328 HGMLEEAEKSFCGMGERNLVS-WTALLSGYVKNGNGKKALEGF-SQILELGVGFDSCCFA 385

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL++  S C NL L   G  +HG  +K     D  V  ALI +Y +CR ++SA  VF S 
Sbjct: 386 TLLDGCSECKNLGL---GLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSL 442

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
            + N+ ++N ++S +     E  A+ LF  L   + +P+ ++   +LS       L  GK
Sbjct: 443 LDKNIVSFNAILSGYIGADEE-DAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGK 501

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHG 634
            +H ++   GF+ N  + +A++ MY+ C S               + +W+++ISAY  HG
Sbjct: 502 CLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHG 561

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
           +G +A+ LF EM      P + +++S+L ACS+SGL++EG   +N+M  +Y ++PE EH 
Sbjct: 562 QGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHF 621

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
            C+VD+LGR+G L EA  FI   P    P +W  ++  C  HGD   G+  ++ L  L P
Sbjct: 622 ACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAP 681

Query: 755 ENVGYYISLSNMYVALGRWKDAVEI 779
           E  G YI +SN+Y   G   +A  +
Sbjct: 682 EEAGSYILVSNLYAGGGMLNEAARV 706



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 252/520 (48%), Gaps = 38/520 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+ +H    K G   D+   N  VN+Y K   L  ++  F  M   +T++W T++ G L 
Sbjct: 97  GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQ 156

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
            N  E      REM W GE+ +  + S  + A   L  L  G+ IH   IK G+++  +V
Sbjct: 157 VNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFV 216

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               SLISMYS+CGD+ AAE+ +  +  KDV   N +I  +   G  E+A  +   + L 
Sbjct: 217 GT--SLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHL-LG 273

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             +EP+  T   +IS C   + +   R +HG  I+   G ++ + N+++  Y K   L +
Sbjct: 274 SGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEE 333

Query: 332 AELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCN 379
           AE  F  +   N LVSW +++SG             F ++L L   F       +L  C+
Sbjct: 334 AEKSFCGMGERN-LVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCS 392

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA----FSLLQRISHNSDT 435
             ++L  G  IH + +KLG+ ++     AL+ +Y  C  L +A     SLL +       
Sbjct: 393 ECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDK------- 445

Query: 436 SCWNIVIVACTQNGHF----QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
              NIV      +G+     ++A+  F S  +  +  PDSVT   ++S   +     +GK
Sbjct: 446 ---NIVSFNAILSGYIGADEEDAMALF-SQLRLADIKPDSVTFARLLSLSADQACLVKGK 501

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            LH   +K+    +  V NA+ITMY +C  I  A  +F S    +  +WN +ISA++ + 
Sbjct: 502 CLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHG 561

Query: 552 AEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
              +AL LF  +   EF P+EI+I+S+L AC+  G+L  G
Sbjct: 562 QGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEG 601



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 275/550 (50%), Gaps = 25/550 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            +L+  Y   +    + ++F E   ++ +TW  +I   ++   V        EM   G  
Sbjct: 117 NNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEE 176

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           F+  T  +I+ A   +  L +G  +H   IK G   D  +    ++MY++CGDL ++E  
Sbjct: 177 FNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKV 236

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           +S +   D    N ++S        EK +  F  +  SG + ++ + ++ +  SAC G++
Sbjct: 237 YSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVI--SACNGDI 294

Query: 191 SYG--KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
                +V+H + IK G  D   +SV N+++S+Y + G +E AE++F GM  +++VSW A+
Sbjct: 295 DVEVLRVLHGMCIKCGCGDE--ISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTAL 352

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           + G+  NG  ++A +   ++ L   V  D     TL+  C++   L  G  +HG+ ++  
Sbjct: 353 LSGYVKNGNGKKALEGFSQI-LELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLG 411

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF----KEMLYLCS 364
             +D+ +  +L+D Y+K   L  A L+F+++   N +VS+N+++SG      ++ + L S
Sbjct: 412 YVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKN-IVSFNAILSGYIGADEEDAMALFS 470

Query: 365 QFSF------STLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Q         S   A L S ++ ++ L  GK +H + +K GF  N    NA++ MY  CG
Sbjct: 471 QLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCG 530

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  L   +++  D+  WN VI A   +G  ++A+  F+ M +++   PD +T+++V
Sbjct: 531 SIGDACQLFYSMNY-LDSISWNAVISAYALHGQGRKALILFEEMKKEEFV-PDEITILSV 588

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA-STVFESCYN 534
           + AC    L  EG  L    ++S  G+   +++   ++ + GR   +  A S +  S ++
Sbjct: 589 LQACSYSGLLEEGFCLFN-DMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFS 647

Query: 535 CNLCTWNCMI 544
            +   W  ++
Sbjct: 648 GSPLLWRTLV 657



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 246/510 (48%), Gaps = 50/510 (9%)

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           IS+ +  L+L  G+++H +  +  LGY  D    N+L++ Y K N L  A+ +F+ +   
Sbjct: 87  ISIGSGDLML--GQAIHAFLAK--LGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVR 142

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           N  ++W ++I G            + +EM ++  +F+  T   IL +C+S E+L  G+ I
Sbjct: 143 N-TITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQI 201

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H + +K GF  +     +L+ MY  CGDL AA  +   +++  D  C N +I    + G 
Sbjct: 202 HGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYK-DVRCLNFMISEYGKAGC 260

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKSLMGLDTRVQ 509
            ++AI  F  +       P+  T  NVISAC G++++    + LHG+ +K   G +  V 
Sbjct: 261 GEKAIGVFLHLL-GSGLEPNDYTFTNVISACNGDIDVEVL-RVLHGMCIKCGCGDEISVG 318

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH---LEFE 566
           NA++++Y +   ++ A   F      NL +W  ++S + +N    +ALE F     L   
Sbjct: 319 NAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVG 378

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------- 617
            +     ++L  C++   L  G QIHG V  LG+  +  + +AL+D+Y+ C         
Sbjct: 379 FDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLV 438

Query: 618 ------KSNAAWSSMISAYGYHGKGWE-AIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                 K+  ++++++S  GY G   E A+ LF ++  + I+P   +   LLS  +    
Sbjct: 439 FHSLLDKNIVSFNAILS--GYIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQAC 496

Query: 671 VDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           + +G   +  +++  ++  P   +   ++ M  + G + +A +   ++        W A+
Sbjct: 497 LVKGKCLHAYIIKTGFEANPSVGN--AVITMYAKCGSIGDACQLFYSMNYLDSIS-WNAV 553

Query: 730 LSACSHHGDTKMGKQVAELLFKLE--PENV 757
           +SA + HG  +    + E + K E  P+ +
Sbjct: 554 ISAYALHGQGRKALILFEEMKKEEFVPDEI 583



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 226/497 (45%), Gaps = 18/497 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +   TSL++ YS      ++  ++     KDV   N MI+   +  C    +  
Sbjct: 208 RGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGV 267

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  ++  G+  +  T   ++SA      ++  RV+H + IK G   + S+ N  V++Y K
Sbjct: 268 FLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVK 327

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L  +E +F GM   + VSW  ++SG + N   +K L  F ++   G   D+   ++ 
Sbjct: 328 HGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATL 387

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +   +    L  G  IH   +KLGY     VSV  +LI +Y++C  + +A   F  +  K
Sbjct: 388 LDGCSECKNLGLGLQIHGFVVKLGYVHD--VSVGTALIDLYAKCRKLRSARLVFHSLLDK 445

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           ++VS+NAI+ G+ +    E+A  L  +++L   ++PD  T   L+SL AD   L +G+ +
Sbjct: 446 NIVSFNAILSGY-IGADEEDAMALFSQLRLA-DIKPDSVTFARLLSLSADQACLVKGKCL 503

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
           H Y I+     +  + N+++  Y+K  S+  A  LF ++  + D +SWN++IS       
Sbjct: 504 HAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYL-DSISWNAVISAYALHGQ 562

Query: 355 ------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVN 407
                 LF+EM          T+L++L +C+    LE G  + +  + K G         
Sbjct: 563 GRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFA 622

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            ++ +    G L  A S + R   +     W  ++  C  +G         K +      
Sbjct: 623 CMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPE 682

Query: 468 SPDSVTLVNVISACGNL 484
              S  LV+ + A G +
Sbjct: 683 EAGSYILVSNLYAGGGM 699


>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 168/569 (29%), Positives = 291/569 (51%), Gaps = 34/569 (5%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WN+ I      G   +A  L  +M+    +EP+  T  ++   C+  L L+  + VH
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMK-QNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + ++     DL +  S++D Y K + L  A  LF+ + P  D+ SWNSMI G       
Sbjct: 78  THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRM-PXRDVASWNSMIXGFAQLGFV 136

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM     +    T++ +  S  S + L+  +SIH + +K+G   +    N  
Sbjct: 137 DRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTW 196

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           +  Y  CG+   A ++   I     T   WN +I          +A+  FK M       
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXG-GFR 255

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D  T+++++S+C   E+ F GK +H   ++     D +V N LI+MY +C DI SA  +
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           F++       +W  MI+  ++      A+ LF  +E    +P+ ++I+S++S C Q G L
Sbjct: 316 FDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             GK I  +    G ++N  + +AL+D+Y+ C               KS  +W+++I+  
Sbjct: 376 ELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGC 435

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +G+  EA+ LF +M   G++P   + +++L AC+H+G +++G + +N M + Y + P 
Sbjct: 436 ALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPG 495

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            +H+ C+ D+LGR G+L+EA+EFI+N+P +P  G+W  +LSAC  H +  +G+ VA  LF
Sbjct: 496 LDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLF 555

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +LEP+    Y+ ++N+Y + G+W     I
Sbjct: 556 ELEPQTAVPYVQMANIYASAGKWDRVAAI 584



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 247/502 (49%), Gaps = 26/502 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A L   TS++  Y   S    +  LF     +DV +WN+MI    +   V   +  F 
Sbjct: 85  FQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFC 144

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM  EGIR DS T++ +  +   +  LK    +H   IK G+  D S+ N ++  YAKCG
Sbjct: 145 EMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCG 204

Query: 123 DLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           +   +E  F G+       VSWN++++G  H     K + +F++M   G +AD  ++ S 
Sbjct: 205 EFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSL 264

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++      L +GK+IHA GI++G +    + V N+LISMYS+CGDI +A   F  M  K
Sbjct: 265 LSSCVQPEVLFHGKLIHAHGIQVGCDSD--IQVINTLISMYSKCGDIGSARYLFDNMLGK 322

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSW A+I G A  G  +EA  L   M+ +   +PD+ T+++L+S C  +  L  G+ +
Sbjct: 323 TRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGE-KPDLVTIISLMSGCGQTGALELGKWI 381

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
             YA    L  +L++ N+L+D Y+K  S+  A  LF  + P   LVSW ++I+       
Sbjct: 382 DTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM-PEKSLVSWTTLIAGCALNGE 440

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN- 407
                GLF +M+ L  + +  T LA+L +CN    LE  K   C+ L         G++ 
Sbjct: 441 FKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLE--KGWECFNLMTKVYKINPGLDH 498

Query: 408 --ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
              +  +    G L  AF  +Q +    D   W++++ AC   QN    E +       +
Sbjct: 499 YSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELE 558

Query: 464 QQNASPDSVTLVNVISACGNLE 485
            Q A P  V + N+ ++ G  +
Sbjct: 559 PQTAVP-YVQMANIYASAGKWD 579



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 264/553 (47%), Gaps = 33/553 (5%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V  WN+ IT  V        L  F +M + G+  ++ T   +  A +++  LK  ++VH 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
             +K+   AD  +    V+MY KC  L  +   FS M   D  SWN+++ G     + ++
Sbjct: 79  HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDR 138

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +  F EMG  G +AD+V++     ++  L +L   + IH+ GIK+G +    VSV+N+ 
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD--VSVSNTW 196

Query: 218 ISMYSQCGDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           I+ Y++CG+   AE  F G+    K  VSWN++I G+A   +  +A     +M L     
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKM-LXGGFR 255

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D++T+++L+S C    +L  G+ +H + I+     D+ ++N+L+  YSK   +  A  L
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ +      VSW +MI+G            LF  M  +  +    T+++++  C    +
Sbjct: 316 FDNMLGKTR-VSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGA 374

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE GK I  +    G  +N +  NAL+ +Y  CG +  A  L   +   S  S W  +I 
Sbjct: 375 LELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVS-WTTLIA 433

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKS 500
            C  NG F+EA+  F  M  +    P+ +T + V+ AC   G LE  +E  +L     K 
Sbjct: 434 GCALNGEFKEALGLFFQMV-ELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKI 492

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA--FSQNK--AEVR 555
             GLD    + +  + GR   +K A    ++  +  ++  W+ ++SA    QN    E  
Sbjct: 493 NPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECV 550

Query: 556 ALELFRHLEFEPN 568
           A  LF   E EP 
Sbjct: 551 AYHLF---ELEPQ 560



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 5/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           G    +  S + + AY+    F  +  +F   +   K  V+WN+MI            + 
Sbjct: 185 GIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVG 244

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FF +M+  G R D +T+L ++S+  Q   L  G+++H   I+ G  +D  + N  ++MY+
Sbjct: 245 FFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYS 304

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGD+ S+   F  M     VSW  +++G       ++ +  F  M   GE+ D V++ S
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++     G L  GK I       G +D+  + V N+LI +Y++CG ++ A   F+ M  
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDN--LMVCNALIDVYAKCGSMDNARELFYTMPE 422

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           K +VSW  +I G ALNG+F+EA  L  +M +   ++P+  T + ++  C  +  L +G
Sbjct: 423 KSLVSWTTLIAGCALNGEFKEALGLFFQM-VELGLKPNHITFLAVLQACNHAGFLEKG 479


>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
 gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
          Length = 763

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 210/746 (28%), Positives = 341/746 (45%), Gaps = 51/746 (6%)

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA--DSSLCNVFVNMYAKCG 122
           VE G   D+     ++   ++   L   R V    ++  +++  DS   N  VNMYAKCG
Sbjct: 22  VEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNSLVNMYAKCG 81

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS-LSSAV 181
            L  +   F  +   D VSW T++     N    + L  F  M   G   D  + L++ V
Sbjct: 82  SLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPDGRTYLAALV 141

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           A ++ L  L  G  +H+     G +  P+V+  N+LI MYS+CG +  A++ F     +D
Sbjct: 142 ACASLLRCLERGMDVHSQSRTSGCDSVPFVA--NTLIDMYSKCGSLLDAKKVFDSTQARD 199

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            V+W A++ G+A NG+ E A  L   M+  +    +     +L+  C     L  G  +H
Sbjct: 200 AVAWTAMMLGYAENGEAERALHLFACME-QQGCMYNREAYTSLLRECISGRALERGARIH 258

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
              I      D  + N L+  Y+K   L +A   F +I   N  VSW  M++        
Sbjct: 259 ARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNS-VSWTVMLAAYIDHGKQ 317

Query: 355 -----LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                LF  M    +Q      TL  +L +C+S  +   G++IH   +  G+  +    N
Sbjct: 318 EQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQN 377

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           AL+ MY  C  L  A  +   I   S  S W  +I A  Q+    E++K F +M      
Sbjct: 378 ALVTMYAKCHCLEEARRVFDNIQDKSRVS-WTSIISAYVQHERGDESLKMFLAM-NLDGM 435

Query: 468 SPDSVTLVNVISACGNLE-----LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDI 522
            PD +TL  + +AC  LE     LA  G+ +H     +    +  V  AL+ MY RC  +
Sbjct: 436 QPDEMTLSALCAACCQLEDRGRGLAV-GRGVHTRIRVAGHDQNPVVGTALVCMYARCGCL 494

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC 579
             A+ VF      ++ +WN M++A  +      AL L + +  E   P+  +   +++AC
Sbjct: 495 LEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAAC 554

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK------------------SNA 621
           + L      + +H  V   G   +    +AL+ MY+ C                   + A
Sbjct: 555 SALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVA 614

Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
           AW+S+++A   HG G  A+E F  M  + ++P   ++  +L ACSHSGL+  GL Y+ +M
Sbjct: 615 AWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSM 674

Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
           L ++ + P  EH+ C++D+LGR+G   EA E I+ +P  P    W  +L++C    D   
Sbjct: 675 LHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASCQTSKDAGR 734

Query: 742 GKQVAELLFKLEP-ENVGYYISLSNM 766
           G + A  L +++P  +   Y+ LSN+
Sbjct: 735 GSRAAMQLIRMDPLLHDSSYVLLSNI 760



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 310/682 (45%), Gaps = 49/682 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+  Y+       + A F +   +D V+W  +I A  EN      L  F  M +EG   
Sbjct: 72  SLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLP 131

Query: 72  DSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
           D  T L  +V+  + + CL++G  VH  S  +G  +   + N  ++MY+KCG L  ++  
Sbjct: 132 DGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKV 191

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F      D V+W  +M G   N   E+ L  F  M   G   +  + +S +        L
Sbjct: 192 FDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRAL 251

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G  IHA  I +  E     ++ N L+ MY++CGD+  A +AF+ +  ++ VSW  ++ 
Sbjct: 252 ERGARIHARLIAI--EKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLA 309

Query: 251 GFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            +  +GK E+   L H M L  +  + D  T+  ++S C+      EG+++H   +    
Sbjct: 310 AYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGY 369

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             D+ + N+L+  Y+K + L +A  +F+ I   +  VSW S+IS             +F 
Sbjct: 370 ELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSR-VSWTSIISAYVQHERGDESLKMFL 428

Query: 358 EMLYLCSQFSFSTLLAILPSC----NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            M     Q    TL A+  +C    +    L  G+ +H      G   N +   AL+ MY
Sbjct: 429 AMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCMY 488

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG L+ A ++  +++   D   WN ++ A  + G  +EA++  + M + +   PD+ T
Sbjct: 489 ARCGCLLEAAAVFNKLT-PKDVVSWNAMLTATVEAGEAEEALRLHQRM-RAEGVMPDAAT 546

Query: 474 LVNVISACGNLELAFEGKSLHG-LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
              V++AC  L+     +++H  +A + L G       AL+ MY +C  +  A+TVFE  
Sbjct: 547 FAVVVAACSALKDEATSRAVHTEVAARGLDGHPVS-GTALVCMYAKCGRLDDATTVFERM 605

Query: 533 YNCN---LCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLR 586
              +   +  WN +++A +++     A+E FR +     +P+ I+I  +L AC+  G+L 
Sbjct: 606 QRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLLA 665

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEM 646
            G              + F+S  +L  +    +   ++ +I   G  G G EA E+   M
Sbjct: 666 TGL-------------DYFLS--MLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGM 710

Query: 647 CNSGIRPTKSSVISLLSACSHS 668
                 P   +  +LL++C  S
Sbjct: 711 ---PFAPDNVAWKTLLASCQTS 729



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 150/599 (25%), Positives = 270/599 (45%), Gaps = 73/599 (12%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           + +L+  YS       +  +F  T  +D V W AM+    EN      LH F  M ++G 
Sbjct: 172 ANTLIDMYSKCGSLLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGC 231

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            ++      ++        L++G  +H   I      D+++ N+ V MYAKCGDL+ +  
Sbjct: 232 MYNREAYTSLLRECISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARK 291

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC--L 187
            F  +   ++VSW  +++  + +   E+ L  F  M   G QAD  + + +   SAC  L
Sbjct: 292 AFYSIERRNSVSWTVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSL 351

Query: 188 GELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           G  + G+ IHA  +  GYE D P   + N+L++MY++C  +E A R F  +  K  VSW 
Sbjct: 352 GAGAEGQAIHARLVACGYELDIP---LQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWT 408

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE-------GRS 299
           +II  +  + + +E+  +   M L   ++PD    +TL +LCA    L +       GR 
Sbjct: 409 SIISAYVQHERGDESLKMFLAMNL-DGMQPD---EMTLSALCAACCQLEDRGRGLAVGRG 464

Query: 300 VHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
           VH     R+ G+D   ++  +L+  Y++   L +A  +FN + P  D+VSWN+M++    
Sbjct: 465 VHTRI--RVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTP-KDVVSWNAMLTATVE 521

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPS----------CNSPESLEFGKSIHCWQLKLGFSNN 402
            G  +E L L  +        ++P           C++ +     +++H      G   +
Sbjct: 522 AGEAEEALRLHQRMRAE---GVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLDGH 578

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNS--DTSCWNIVIVACTQNGHFQEAIKTFKS 460
            +   AL+ MY  CG L  A ++ +R+  +S    + WN ++ A  ++GH   A++ F+ 
Sbjct: 579 PVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFFRV 638

Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
           MT      PD +T+  ++ AC +  L   G   + L++    GL    ++          
Sbjct: 639 MTMAY-VQPDGITITVMLHACSHSGLLATGLD-YFLSMLHDFGLAPAAEH---------- 686

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
                              + C+I    +      A E+ R + F P+ ++  ++L++C
Sbjct: 687 -------------------YACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLASC 726



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 33/371 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +P   +L+T Y+     E +  +F    +K  V+W ++I+A V++      L  F
Sbjct: 368 GYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMF 427

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQM----NCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
             M  +G++ D  TL  + +A  Q+      L  GR VH     AG   +  +    V M
Sbjct: 428 LAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTALVCM 487

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+CG L  +   F+ +   D VSWN +++  +     E+ L   + M   G   D  + 
Sbjct: 488 YARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATF 547

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +  VAA + L + +  + +H      G +  P VS T +L+ MY++CG ++ A   F  M
Sbjct: 548 AVVVAACSALKDEATSRAVHTEVAARGLDGHP-VSGT-ALVCMYAKCGRLDDATTVFERM 605

Query: 238 ---TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
              +   V +WN+I+   A +G    A +    M  M  V+PD  T+  ++  C+ S LL
Sbjct: 606 QRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMT-MAYVQPDGITITVMLHACSHSGLL 664

Query: 295 REGRSVHGYAIRRLLGYDLLMMNS------------LMDFYSKSNSLSKAELLFNAIAPM 342
             G           L Y L M++             L+D   ++   ++AE +   +   
Sbjct: 665 ATG-----------LDYFLSMLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFA 713

Query: 343 NDLVSWNSMIS 353
            D V+W ++++
Sbjct: 714 PDNVAWKTLLA 724


>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
 gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
          Length = 564

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 172/572 (30%), Positives = 286/572 (50%), Gaps = 38/572 (6%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           MY +CG +E A   F  +      SWN ++  +  NG  ++A +L  +M  +  +  D  
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
           T VT  + C+    L EG+  H   +   L   L++ ++LM+ Y +  S  +A  +F+ I
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120

Query: 340 APMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSI 390
            P+ ++V WN MI+     G F E L L    +      T L +L +C    +LE G+ I
Sbjct: 121 -PVKNVVCWNVMIAAYAQNGHFSEALELYYDMNLKPDRVTFLNVLHAC----TLESGRLI 175

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   +  G   +    NAL++M+  CG L  A  +  RI+   D   WN ++    Q GH
Sbjct: 176 HQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFR-DVISWNALMSVYIQQGH 234

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
            +EA + FK M  +    P+SVT ++++ AC +LE   + + +H       +  D +V N
Sbjct: 235 RKEAFELFKRM-DKAGLQPNSVTYLSLLPACSSLE---QLREIHQELADQGLEQDEQVGN 290

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---P 567
            LIT Y +   ++ +  VFE     ++ +W CMI    ++    RAL+L+R +  E   P
Sbjct: 291 TLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           + +++V  L ACT +  L  G++IH  V       + F+++A+++MY  C          
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                 + A W+S+I AY  HG   +A++L+  M  SG RP   +++  L ACSH GL+D
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLD 469

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
              ++Y+ M+E+Y V     H  C+VD+  R+G + EA E I ++P++P    W A+L+A
Sbjct: 470 RAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNA 529

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
           C  H D + G   A    +L+      ++ LS
Sbjct: 530 CKAHNDMERGAWAACKAHELDSRRSSPFVVLS 561



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 284/584 (48%), Gaps = 71/584 (12%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNV 175
           MY KCG +  +   F+ +  +   SWN ++    +N   ++ L  F++M    G +AD V
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +  +A  A + +G L  GK  H+  ++ G E S  + + ++L++MY +CG  E A + F 
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESS--LILDSALMNMYGRCGSAEEARKIFD 118

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  K+VV WN +I  +A NG F EA +L ++M L    +PD  T + ++  C     L 
Sbjct: 119 RIPVKNVVCWNVMIAAYAQNGHFSEALELYYDMNL----KPDRVTFLNVLHACT----LE 170

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-- 353
            GR +H   +   L  D  + N+L++ + K  SLS A+ +F+ IA   D++SWN+++S  
Sbjct: 171 SGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIA-FRDVISWNALMSVY 229

Query: 354 ----------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      LFK M     Q +  T L++LP+C+S E L   + IH      G   + 
Sbjct: 230 IQQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQL---REIHQELADQGLEQDE 286

Query: 404 IGVNALMHMY--INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
              N L+  Y   +  D VA F  ++R S  S    W  +I+   ++G+   A+  ++ M
Sbjct: 287 QVGNTLITAYNKFSLEDSVAVFERMKRRSVVS----WTCMIMGMVEHGYGGRALDLYREM 342

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
              +   PD+V LV  + AC ++E   EG+ +H L   + M  D  V  A++ MYG+C  
Sbjct: 343 V-VEGVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGK 401

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSA 578
              A  VF+      + TWN +I A++Q+     AL+L+  +E     P+ ++++  L A
Sbjct: 402 FAEAEAVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFA 461

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSA------LLDMYSNCKSNAAWSSMISAYGY 632
           C+ LG+L   ++     F+ G  E+  + +       L+D++  C++             
Sbjct: 462 CSHLGLLDRARE-----FYSGMVEDYQVEAVPAHFGCLVDLF--CRA------------- 501

Query: 633 HGKGW--EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              GW  EA EL   M    +RP  S+  +LL+AC     ++ G
Sbjct: 502 ---GWIDEAEELIASM---PVRPHISAWTALLNACKAHNDMERG 539



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 225/483 (46%), Gaps = 30/483 (6%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTT 75
           Y      E + A+F         +WN M+ A   N      L  F +MV+  GIR D  T
Sbjct: 2   YGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVT 61

Query: 76  LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
            +   +A + +  L++G+  H   +++G+ +   L +  +NMY +CG    +   F  + 
Sbjct: 62  FVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIP 121

Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
             + V WN +++    N +  + L  + +M     + D V+  + + A      L  G++
Sbjct: 122 VKNVVCWNVMIAAYAQNGHFSEALELYYDMNL---KPDRVTFLNVLHACT----LESGRL 174

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IH   +  G E   +V   N+L++M+ +CG +  A+R F  +  +DV+SWNA++  +   
Sbjct: 175 IHQDVVSAGLERDKFVG--NALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQ 232

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
           G  +EAF+L   M     ++P+  T ++L+  C+    LRE   +H     + L  D  +
Sbjct: 233 GHRKEAFELFKRMD-KAGLQPNSVTYLSLLPACSSLEQLRE---IHQELADQGLEQDEQV 288

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC 363
            N+L+  Y+K  SL  +  +F  +     +VSW  MI G            L++EM+   
Sbjct: 289 GNTLITAYNKF-SLEDSVAVFERM-KRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEG 346

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +     L+  L +C S E+L  G+ IH          +     A+++MY  CG    A 
Sbjct: 347 VRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAE 406

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           ++ Q +   +  + WN +I A  Q+GH  +A+K ++ M +     PD VTL+  + AC +
Sbjct: 407 AVFQGMK-TTTVATWNSLIGAYAQHGHATDALKLYERM-ELSGTRPDGVTLLCALFACSH 464

Query: 484 LEL 486
           L L
Sbjct: 465 LGL 467



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 15/351 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++L+  Y      E +  +F     K+VV WN MI A  +N      L  +
Sbjct: 89  GLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEALELY 148

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    ++ D  T L ++ A T    L+ GR++H   + AG+  D  + N  VNM+ KC
Sbjct: 149 YDM---NLKPDRVTFLNVLHACT----LESGRLIHQDVVSAGLERDKFVGNALVNMFGKC 201

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ ++  F  +   D +SWN +MS  +   + ++    F+ M  +G Q ++V+  S +
Sbjct: 202 GSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMDKAGLQPNSVTYLSLL 261

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A + L +L   + IH      G E    V   N+LI+ Y++   +E +   F  M  + 
Sbjct: 262 PACSSLEQL---REIHQELADQGLEQDEQVG--NTLITAYNKF-SLEDSVAVFERMKRRS 315

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VVSW  +I G   +G    A DL  EM ++  V PD   +V  +  C     L EGR +H
Sbjct: 316 VVSWTCMIMGMVEHGYGGRALDLYREM-VVEGVRPDAVALVCALDACTSVENLAEGRKIH 374

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                  +  D+ +  ++++ Y K    ++AE +F  +     + +WNS+I
Sbjct: 375 RLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTT-VATWNSLI 424



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 116/241 (48%), Gaps = 3/241 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +L+TAY+  S  E S+A+F     + VV+W  MI   VE+      L  + EMV EG+R 
Sbjct: 291 TLITAYNKFS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D+  L+  + A T +  L +GR +H L     M+ D  +    VNMY KCG    +E  F
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM      +WN+++     + +    L  +  M  SG + D V+L  A+ A + LG L 
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLD 469

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIID 250
             +  ++ G+   Y+     +    L+ ++ + G I+ AE     M  +  +S W A+++
Sbjct: 470 RAREFYS-GMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLN 528

Query: 251 G 251
            
Sbjct: 529 A 529


>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
 gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
          Length = 630

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 168/602 (27%), Positives = 299/602 (49%), Gaps = 47/602 (7%)

Query: 211 VSVTNSLISMYSQCG---DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           V + N LI MY +CG    +  A   F  M  KDVVSW+ II  +   G   EA +L   
Sbjct: 34  VHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQR 93

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M     VEP+   +V+ ++ C+ +  L  G ++H   +   L   + +  +L++ Y+K  
Sbjct: 94  MD----VEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCG 149

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAIL 375
           ++ +A  +F+ I P  D+VSW +MI+               + M+    Q +  T +A +
Sbjct: 150 AIEQARAVFDQI-PHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAI 208

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C+S E L+ G+ IH   + LG   +    NAL+ MY        A S+ QR+   +  
Sbjct: 209 TACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRV 268

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S WN +I A   +     A+  F  M  +    PD V+ + V+SAC +       K +H 
Sbjct: 269 S-WNSMIAAFAASAQSCAAMGLFHGMNLE-GIKPDDVSFLGVLSACSSTRCLRSCKRIHS 326

Query: 496 -LALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            L L ++    D  V+N+L+T Y +C D+++A  +F+     N+ +W  M++A++ +   
Sbjct: 327 QLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNG 386

Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
            +ALEL+  +     +P+ + +++++ A + +G +   +++H  V    F     I +AL
Sbjct: 387 SKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNAL 446

Query: 611 LDMYSNC--------------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           ++MY+ C                    +    WSS+++ Y +HG    AI L+ +M   G
Sbjct: 447 INMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEG 506

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++P   + +S+L++CSH+GL+ +   ++ +M+E++ +    +H  C+VD+LGR+G +  A
Sbjct: 507 VQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRA 566

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
            + ++N+P QP    W  +L  C  HGD + G   A     + P   G  + LSNMY  +
Sbjct: 567 EDVVRNMPFQPDVVAWNTLLGCCKVHGDARRGAVAARNAVGISPGFAGSTVLLSNMYAEI 626

Query: 771 GR 772
           GR
Sbjct: 627 GR 628



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 252/591 (42%), Gaps = 66/591 (11%)

Query: 21  SYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIV 80
           S    + A+F +   KDVV+W+ +I A  +       ++ F  M  E         ++IV
Sbjct: 51  SSLADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMDVE------PNEMVIV 104

Query: 81  SALTQMNCLKQ---GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
           S L   +  K    G  +H   +   +     +    +NMYAKCG +  +   F  +   
Sbjct: 105 STLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHK 164

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D VSW  +++         + L     M  +  Q + V+  +A+ A +    L  G+ IH
Sbjct: 165 DVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIH 224

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A  I LG      +++ N+L+SMY++    E A   F  M  ++ VSWN++I  FA + +
Sbjct: 225 AAVIDLGLHGD--ITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQ 282

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY----AIRRLLGYDL 313
              A  L H M L   ++PD  + + ++S C+ +  LR  + +H      A+      DL
Sbjct: 283 SCAAMGLFHGMNL-EGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHS--PPDL 339

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
            + NSL+  Y+K   L  AE +F  I P  ++VSW +M++             L+ +M+ 
Sbjct: 340 SVENSLVTAYAKCGDLEAAERIFQRI-PGKNVVSWTAMLTAYTFHGNGSKALELYDKMVG 398

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
              Q     LL ++ + +    +   + +H       F       NAL++MY  CG L  
Sbjct: 399 QSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGSLEE 458

Query: 422 AFSLLQRISHNS----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
           A  +   I   +    DT  W+ ++     +GH + AI  ++ M   +   PDSVT V++
Sbjct: 459 ARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDM-HLEGVQPDSVTYVSI 517

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +++C                  S  GL  + ++  ++M            V + C     
Sbjct: 518 LNSC------------------SHAGLLAQARHFFVSM------------VEDHCLAAWP 547

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
             W CM+    +     RA ++ R++ F+P+ ++  ++L  C   G  R G
Sbjct: 548 DHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDARRG 598



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 192/387 (49%), Gaps = 21/387 (5%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y+     E + A+F +  +KDVV+W AMITA  +       L     M++  ++
Sbjct: 139 TALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQ 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  T +  ++A +    L +GR +H   I  G+  D ++ N  V+MYAK      +   
Sbjct: 199 PNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSV 258

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   + VSWN++++    +      +  F  M   G + D+VS    ++A +    L
Sbjct: 259 FQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCL 318

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              K IH+          P +SV NSL++ Y++CGD+EAAER F  +  K+VVSW A++ 
Sbjct: 319 RSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLT 378

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--RSVHGYAIRRL 308
            +  +G   +A +L  +M + +S++PD  +VV L  + A SL+   G  R +H       
Sbjct: 379 AYTFHGNGSKALELYDKM-VGQSIQPD--SVVLLNVIYAGSLVGDVGLARKLHARVASSS 435

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN----DLVSWNSMISG---------- 354
               + + N+L++ Y++  SL +A  +F+ I   N    D V+W+S+++G          
Sbjct: 436 FMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYA 495

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCN 379
             L+++M     Q    T ++IL SC+
Sbjct: 496 ILLYRDMHLEGVQPDSVTYVSILNSCS 522



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 182/362 (50%), Gaps = 17/362 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
           G    +    +L++ Y+  S  E +L++F    +++ V+WN+MI   A     C  MGL 
Sbjct: 231 GLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGL- 289

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM--IADSSLCNVFVNM 117
            F  M  EGI+ D  + L ++SA +   CL+  + +H     A +    D S+ N  V  
Sbjct: 290 -FHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTA 348

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVS 176
           YAKCGDL ++E  F  +   + VSW  +++    H N  +   LY + +G S  Q D+V 
Sbjct: 349 YAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQS-IQPDSVV 407

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
           L + + A + +G++   + +HA      +     + + N+LI+MY++CG +E A R F G
Sbjct: 408 LLNVIYAGSLVGDVGLARKLHARVASSSF--MLKIQIQNALINMYTRCGSLEEARRVFDG 465

Query: 237 -----MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
                +  +D V+W++++ G+A +G  E A  L  +M L   V+PD  T V++++ C+ +
Sbjct: 466 IERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHL-EGVQPDSVTYVSILNSCSHA 524

Query: 292 LLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
            LL + R      +    L         ++D   ++  + +AE +   +    D+V+WN+
Sbjct: 525 GLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNT 584

Query: 351 MI 352
           ++
Sbjct: 585 LL 586



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 26/212 (12%)

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLG-FQENSFISSALLDMYSNC--------------- 617
           S+L  C     L  G+++H H+   G F  +  + + L+ MY  C               
Sbjct: 3   SLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQ 62

Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
              K   +WS +I+AYG  G   EAI LF  M    + P +  ++S L+ACS +  +  G
Sbjct: 63  MPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLALG 119

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
           +  +  +L   D+R        +++M  + G +++A      +P +     W AM++A +
Sbjct: 120 MAIHARILSP-DLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVS-WTAMITAFA 177

Query: 735 HHGDTKMGKQVAELLF--KLEPENVGYYISLS 764
             GD +   +  E +   +++P  V +  +++
Sbjct: 178 QMGDCRQALETLEGMIQARVQPNPVTFVAAIT 209


>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
 gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
          Length = 1530

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 234/397 (58%), Gaps = 20/397 (5%)

Query: 401  NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
            NN    N L+++Y++   L  A++L   +   +  S W+I+I    + G F +  KTFK 
Sbjct: 1113 NNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVS-WSIMIGGFVKVGEFMQCYKTFKE 1171

Query: 461  MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
            + +     PD+ TL  VI AC +      G+ +H + LK  + LD  V  AL+ MY +C+
Sbjct: 1172 LIRN-GVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCK 1230

Query: 521  DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
             I+ A  +F+   + +L TW  MI  +++      +L LF HL    F P++I++VSI++
Sbjct: 1231 VIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVN 1290

Query: 578  ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
            AC +LG +   + +H +V    F  +  + +A++DMY+ C               K+  +
Sbjct: 1291 ACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVIS 1350

Query: 623  WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
            WS+MI+AYGYHG+G +A+ELF  M +SGI P   + +SLL ACSH+GLV++GL   + M 
Sbjct: 1351 WSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMW 1410

Query: 683  EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG 742
            E + VRP+ +HH C+VD+LGR+G+L EA+ FI+N+ ++   G+W ++L AC  H    + 
Sbjct: 1411 ESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLA 1470

Query: 743  KQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            ++ A+ L +L+P+N G YI LSN+Y   G+WKD  +I
Sbjct: 1471 EKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKI 1507



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 173/352 (49%), Gaps = 12/352 (3%)

Query: 6    HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
            +L  +  LL  Y +      + ALF E   K+ V+W+ MI   V+    +     F E++
Sbjct: 1114 NLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELI 1173

Query: 66   EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
              G++ D+ TL  ++ A      L  GR++HC+ +K G+  D  +C   V+MYAKC  + 
Sbjct: 1174 RNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIE 1233

Query: 126  SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
             ++  F  M   D V+W  ++ G       ++ L+ F  +   G   D +++ S V A A
Sbjct: 1234 DAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNACA 1293

Query: 186  CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
             LG ++  + +H    +  +  S  V +  ++I MY++CGD+++A   F  M  K+V+SW
Sbjct: 1294 KLGAMNKARFVHEYVNRNRF--SLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISW 1351

Query: 246  NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV----- 300
            +A+I  +  +G+ ++A +L   M L   + P+  T V+L+  C+ + L+ +G ++     
Sbjct: 1352 SAMIAAYGYHGQGKKALELF-PMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMW 1410

Query: 301  HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              + +R     D+     ++D   ++  L++A      +    D   W+S++
Sbjct: 1411 ESFGVRP----DIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLL 1458



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 147/292 (50%), Gaps = 18/292 (6%)

Query: 312  DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEM 359
            +L + N L+  Y     L+ A  LF+ + P  + VSW+ MI G             FKE+
Sbjct: 1114 NLTVANKLLYVYVHHKCLTDAYALFDEM-PQKNPVSWSIMIGGFVKVGEFMQCYKTFKEL 1172

Query: 360  LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
            +    Q    TL  ++ +C    +L+ G+ IHC  LK G   +     AL+ MY  C  +
Sbjct: 1173 IRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCK-V 1231

Query: 420  VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
            +    LL  +  + D   W ++I    + G+ +E++  F  + +++   PD + +V++++
Sbjct: 1232 IEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHL-REEGFVPDKIAMVSIVN 1290

Query: 480  ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
            AC  L    + + +H    ++   LD  +  A+I MY +C D+ SA  +F++ ++ N+ +
Sbjct: 1291 ACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIFDNMHHKNVIS 1350

Query: 540  WNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
            W+ MI+A+  +    +ALELF  +      PN I+ VS+L AC+  G++  G
Sbjct: 1351 WSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDG 1402



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 15/267 (5%)

Query: 12   SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
            +L+  Y+     E +  LF    +KD+VTW  MI    E       L  F  + EEG   
Sbjct: 1221 ALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFDHLREEGFVP 1280

Query: 72   DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
            D   ++ IV+A  ++  + + R VH    +     D  L    ++MYAKCGD++S+   F
Sbjct: 1281 DKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKCGDVDSAREIF 1340

Query: 132  SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
              MH  + +SW+ +++   ++   +K L  F  M  SG   +N++  S + A +  G + 
Sbjct: 1341 DNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVE 1400

Query: 192  YGKVIHAL-----GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSW 245
             G  + +L     G++      P +     ++ +  + G +  A R    MT  KD   W
Sbjct: 1401 DGLTLLSLMWESFGVR------PDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLW 1454

Query: 246  NAIIDGFALNGKF---EEAFDLLHEMQ 269
            ++++    ++ +    E+A   L E+Q
Sbjct: 1455 SSLLGACRIHKRIDLAEKAAKSLLELQ 1481


>gi|302813108|ref|XP_002988240.1| hypothetical protein SELMODRAFT_127736 [Selaginella moellendorffii]
 gi|300143972|gb|EFJ10659.1| hypothetical protein SELMODRAFT_127736 [Selaginella moellendorffii]
          Length = 655

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 179/629 (28%), Positives = 309/629 (49%), Gaps = 54/629 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ GK +H+   +LG +    ++   +++ MY +CG I  A + F  +  +DV+ W A+I
Sbjct: 27  LAQGKFLHSQAARLGLDRDELLA--KNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMI 84

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-YAIRRL 308
             +A NG F++   LL  M L+  V P+    +T+++    +  + E RS+H   A+   
Sbjct: 85  TAYARNGDFQQGMALLRAM-LLDGVAPN---KITILAALGTTDCVVEARSIHRILAVESG 140

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L +D+ +  +++  Y +  SL  A   F  + P+ ++V+W+  ++G            +F
Sbjct: 141 LEWDVSVGTAIVSMYCRCGSLEDAIDHFEQM-PVKNVVTWSVAMAGCKELHRPELGLEIF 199

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF----SNNTIGVNALMHM 412
           + ML   +     TL+ +L  C+S E +  G  I    L   F      N I   AL+++
Sbjct: 200 RGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNVIVGTALVNL 259

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   GDL  A  +  R+  N +   W  +I A       ++A++ F+ M Q +   P++V
Sbjct: 260 YAKGGDLERACGVFSRMK-NRNVVTWTALITAHCCCNRDEQALEIFRQM-QLEGVRPNAV 317

Query: 473 TLVNVISACGNLELAFEGKS-----LHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
             VNV++AC ++  A  G++     LHG+ + S + +D  V  AL+ +Y R +  +    
Sbjct: 318 VFVNVLNACCSMPAA--GRTVLELLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHR 375

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGV 584
           VF         +W  MI+ F+QN     AL L+R +  E +     +  +IL AC+ L  
Sbjct: 376 VFLEMEEHTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIA 435

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS------------------NAAWSSM 626
           L   + IH  V   GF  N  +S+ L+  Y  C +                   + WSSM
Sbjct: 436 LPEVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSM 495

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+    HG   EA+ +FH M   G R    +++ +L+ACSH G+  + ++++ +M+ +Y 
Sbjct: 496 IATSARHGCAAEAVAIFHLMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDYK 555

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           V    +H  C+ D+LGR+G+L++A E I+ +P Q    VW  +L AC  HGD    K+ +
Sbjct: 556 VGRTGDHCSCMADLLGRNGRLEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRAKEAS 615

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKD 775
           + +  + PE+   YI LSN+Y   G  +D
Sbjct: 616 DQVSGINPEHAQSYIVLSNVYAESGTKQD 644



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 262/583 (44%), Gaps = 60/583 (10%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++DV+ W AMITA   N     G+     M+ +G+  +  T+L   +AL   +C+ + R 
Sbjct: 74  DRDVILWTAMITAYARNGDFQQGMALLRAMLLDGVAPNKITIL---AALGTTDCVVEARS 130

Query: 95  VH-CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           +H  L++++G+  D S+    V+MY +CG L  +   F  M   + V+W+  M+GC   +
Sbjct: 131 IHRILAVESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELH 190

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVA-ASACLGELSYGKVI-HALGIKLGYEDSPYV 211
            PE  L  FR M   G   D ++L + +   S+C   +  G+++   L  + G E    V
Sbjct: 191 RPELGLEIFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNV 250

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
            V  +L+++Y++ GD+E A   F  M  ++VV+W A+I       + E+A ++  +MQL 
Sbjct: 251 IVGTALVNLYAKGGDLERACGVFSRMKNRNVVTWTALITAHCCCNRDEQALEIFRQMQL- 309

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSV-----HGYAIRRLLGYDLLMMNSLMDFYSKS 326
             V P+    V +++ C    +   GR+V     HG  +   +  D+ +  +LM+ Y++S
Sbjct: 310 EGVRPNAVVFVNVLNACCS--MPAAGRTVLELLLHGVMVDSGVAVDVGVGTALMNLYARS 367

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAI 374
                   +F  +   +  VSW +MI+            GL++ M     +    T   I
Sbjct: 368 KLPEHGHRVFLEMEE-HTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTI 426

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS- 433
           L +C+S  +L   +SIH    + GF  N      LM  Y  CG L  A  +    S  + 
Sbjct: 427 LLACSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNP 486

Query: 434 -DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            +TS W+ +I    ++G   EA+  F  M QQ+ A  D VTL+ V++AC           
Sbjct: 487 LNTSRWSSMIATSARHGCAAEAVAIFHLM-QQEGARADDVTLLCVLAACS---------- 535

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            HG       G+  +     ++M     D K   T  + C        +CM     +N  
Sbjct: 536 -HG-------GMTAKAVEFFVSMI---HDYKVGRT-GDHC--------SCMADLLGRNGR 575

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
              A EL R + F+      +++L AC   G L   K+    V
Sbjct: 576 LEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRAKEASDQV 618



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 141/661 (21%), Positives = 289/661 (43%), Gaps = 79/661 (11%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           + L QG+ +H  + + G+  D  L    V+MY +CG +  +   F  +H  D + W  ++
Sbjct: 25  DALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMI 84

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA-LGIKLGY 205
           +    N   ++ +   R M   G   + +++ +A+  + C+ E    + IH  L ++ G 
Sbjct: 85  TAYARNGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVE---ARSIHRILAVESGL 141

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           E    VSV  +++SMY +CG +E A   F  M  K+VV+W+  + G     + E   ++ 
Sbjct: 142 EWD--VSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIF 199

Query: 266 HEMQLMRSVEPDIATVVTLISLCA-------------DSLLLREGRSVHGYAIRRLLGYD 312
             M L+     D  T+VTL+ LC+             D LL R G  +           +
Sbjct: 200 RGM-LLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIE---------TN 249

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           +++  +L++ Y+K   L +A  +F+ +   N +V+W ++I+             +F++M 
Sbjct: 250 VIVGTALVNLYAKGGDLERACGVFSRMKNRN-VVTWTALITAHCCCNRDEQALEIFRQMQ 308

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSI-----HCWQLKLGFSNNTIGVNALMHMYIN 415
               + +    + +L +C S  +   G+++     H   +  G + +     ALM++Y  
Sbjct: 309 LEGVRPNAVVFVNVLNACCSMPAA--GRTVLELLLHGVMVDSGVAVDVGVGTALMNLYAR 366

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
                    +   +  ++  S W  +I    QN    EA+  ++ M   +    D+ T  
Sbjct: 367 SKLPEHGHRVFLEMEEHTTVS-WTAMIACFAQNSRNAEALGLYRRM-HLEGHRADAKTFT 424

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF---ESC 532
            ++ AC +L    E +S+H    +S   ++  V   L++ YG+C  ++ AS +F    S 
Sbjct: 425 TILLACSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSST 484

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              N   W+ MI+  +++     A+ +F  ++ E    ++++++ +L+AC+  G+     
Sbjct: 485 NPLNTSRWSSMIATSARHGCAAEAVAIFHLMQQEGARADDVTLLCVLAACSHGGMTAKAV 544

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           +              F+S  ++  Y   ++    S M    G +G+  +A EL  +M   
Sbjct: 545 EF-------------FVS--MIHDYKVGRTGDHCSCMADLLGRNGRLEDAEELIRKM--- 586

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQ 708
             +   S  ++LL AC   G +    +  + +     + PE  + ++ + ++   SG  Q
Sbjct: 587 PFQAAASVWMTLLGACRTHGDLPRAKEASDQV---SGINPEHAQSYIVLSNVYAESGTKQ 643

Query: 709 E 709
           +
Sbjct: 644 D 644



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 152/309 (49%), Gaps = 28/309 (9%)

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S ++L  GK +H    +LG   + +    ++HMY+ CG +  A  +   + H+ D   W 
Sbjct: 23  SADALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNL-HDRDVILWT 81

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG-LAL 498
            +I A  +NG FQ+ +   ++M      +P+ +T   +++A G  +   E +S+H  LA+
Sbjct: 82  AMITAYARNGDFQQGMALLRAML-LDGVAPNKIT---ILAALGTTDCVVEARSIHRILAV 137

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +S +  D  V  A+++MY RC  ++ A   FE     N+ TW+  ++   +       LE
Sbjct: 138 ESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLE 197

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE----NSFISSALL 611
           +FR +  E    ++I++V++L  C+    +  G +I        F E    N  + +AL+
Sbjct: 198 IFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNVIVGTALV 257

Query: 612 DMYSN-------C--------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           ++Y+        C        ++   W+++I+A+    +  +A+E+F +M   G+RP   
Sbjct: 258 NLYAKGGDLERACGVFSRMKNRNVVTWTALITAHCCCNRDEQALEIFRQMQLEGVRPNAV 317

Query: 657 SVISLLSAC 665
             +++L+AC
Sbjct: 318 VFVNVLNAC 326



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 207/475 (43%), Gaps = 43/475 (9%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T++++ Y      E ++  F +   K+VVTW+  +  C E     +GL  F  M+ EG  
Sbjct: 149 TAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLLEGAA 208

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVV--------HCLSIKAGMIADSSLCNVFVNMYAKCG 122
            D  TL+ ++   +    +  G  +            I+  +I  ++L    VN+YAK G
Sbjct: 209 VDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNVIVGTAL----VNLYAKGG 264

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           DL  +   FS M   + V+W  +++     N  E+ L  FR+M   G + + V   + + 
Sbjct: 265 DLERACGVFSRMKNRNVVTWTALITAHCCCNRDEQALEIFRQMQLEGVRPNAVVFVNVL- 323

Query: 183 ASACLGELSYGKVIHAL---GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +AC    + G+ +  L   G+ +    +  V V  +L+++Y++    E   R F  M  
Sbjct: 324 -NACCSMPAAGRTVLELLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEE 382

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
              VSW A+I  FA N +  EA  L   M L      D  T  T++  C+  + L E RS
Sbjct: 383 HTTVSWTAMIACFAQNSRNAEALGLYRRMHL-EGHRADAKTFTTILLACSSLIALPEVRS 441

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF---NAIAPMNDLVSWNSMIS--- 353
           +H          +  +  +LM  Y K  +L  A  +F   ++  P+N    W+SMI+   
Sbjct: 442 IHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLN-TSRWSSMIATSA 500

Query: 354 ---------GLFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKS-IHCWQLKLGF 399
                     +F  M    ++    TLL +L +C+    + +++EF  S IH +  K+G 
Sbjct: 501 RHGCAAEAVAIFHLMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDY--KVGR 558

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           + +    + +  +    G L  A  L++++   +  S W  ++ AC  +G    A
Sbjct: 559 TGDH--CSCMADLLGRNGRLEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRA 611



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/309 (22%), Positives = 134/309 (43%), Gaps = 32/309 (10%)

Query: 474 LVNVISACGN---LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           L     ACG+    +   +GK LH  A +  +  D  +   ++ MY RC  I  A  VF+
Sbjct: 11  LARGFQACGDEGSADALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFD 70

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           + ++ ++  W  MI+A+++N    + + L R +  +    + ++IL+A      +   + 
Sbjct: 71  NLHDRDVILWTAMITAYARNGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVEARS 130

Query: 591 IHGHV-FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           IH  +    G + +  + +A++ MY  C               K+   WS  ++      
Sbjct: 131 IHRILAVESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELH 190

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSH-SGLVDEGLQYYNNMLEEYDVRPETEH 693
           +    +E+F  M   G    K ++++LL  CS    +V  G    +++LE +    ET  
Sbjct: 191 RPELGLEIFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNV 250

Query: 694 HV--CIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
            V   +V++  + G L+ A   +  +KN  +      W A+++A   H      +Q  E+
Sbjct: 251 IVGTALVNLYAKGGDLERACGVFSRMKNRNVV----TWTALITA---HCCCNRDEQALEI 303

Query: 749 LFKLEPENV 757
             +++ E V
Sbjct: 304 FRQMQLEGV 312



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 3/185 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   T+L+  Y+     E    +F E      V+W AMI    +N      L  +
Sbjct: 349 GVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEEHTTVSWTAMIACFAQNSRNAEALGLY 408

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG R D+ T   I+ A + +  L + R +H    ++G   + ++    ++ Y KC
Sbjct: 409 RRMHLEGHRADAKTFTTILLACSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKC 468

Query: 122 GDLNSSECTF---SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           G L  +   F   S  +  +T  W+++++    +    + +  F  M   G +AD+V+L 
Sbjct: 469 GTLEDASRIFLHSSSTNPLNTSRWSSMIATSARHGCAAEAVAIFHLMQQEGARADDVTLL 528

Query: 179 SAVAA 183
             +AA
Sbjct: 529 CVLAA 533


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 257/500 (51%), Gaps = 66/500 (13%)

Query: 345 LVSWNSMISGLFKEMLYLCSQFSFSTLLA------------ILPSCNSPESLEFGKSIHC 392
           +++W S+I     + L+  +  SF  + A            +L SC     L FG+S+H 
Sbjct: 70  VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFS-------LLQRISHNSDTSC-------- 437
           + ++LG   +    NALM+MY     + +  S       + QR S++ D           
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189

Query: 438 --------------------WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
                               +N +I    Q+G +++A++  + M    +  PDS TL +V
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLSSV 248

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +          +GK +HG  ++  +  D  + ++L+ MY +   I+ +  VF   Y  + 
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +WN +++ + QN     AL LFR +   + +P  ++  S++ AC  L  L  GKQ+HG+
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368

Query: 595 VFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEA 639
           V   GF  N FI+SAL+DMYS C +                 +W+++I  +  HG G EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           + LF EM   G++P + + +++L+ACSH GLVDE   Y+N+M + Y +  E EH+  + D
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +LGR+GKL+EAY FI  + ++P   VW  +LS+CS H + ++ ++VAE +F ++ EN+G 
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA 548

Query: 760 YISLSNMYVALGRWKDAVEI 779
           Y+ + NMY + GRWK+  ++
Sbjct: 549 YVLMCNMYASNGRWKEMAKL 568



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 260/537 (48%), Gaps = 63/537 (11%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++   T++    Q + +H   I+   ++ +S  ++ +++Y     L+ +   F  +    
Sbjct: 11  LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPP 69

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            ++W +++      +   K L  F EM  SG   D+    S + +   + +L +G+ +H 
Sbjct: 70  VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129

Query: 199 LGIKLGYEDSPYVSVTNSLISMY-----------------------SQCGD--------- 226
             ++LG +   Y    N+L++MY                       S  GD         
Sbjct: 130 FIVRLGMDCDLYTG--NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187

Query: 227 ----IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV 282
               I++  R F  M  KDVVS+N II G+A +G +E+A  ++ EM     ++PD  T+ 
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT-DLKPDSFTLS 246

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +++ + ++ + + +G+ +HGY IR+ +  D+ + +SL+D Y+KS  +  +E +F+ +   
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY-C 305

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
            D +SWNS+++G            LF++M+    +       +++P+C    +L  GK +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H + L+ GF +N    +AL+ MY  CG++ AA  +  R++   + S W  +I+    +GH
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHGH 424

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
             EA+  F+ M ++Q   P+ V  V V++AC ++ L  E       ++  + GL+  +++
Sbjct: 425 GHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN-SMTKVYGLNQELEH 482

Query: 511 --ALITMYGRCRDIKSA-STVFESCYNCNLCTWNCMISAFSQNK----AEVRALELF 560
             A+  + GR   ++ A + + + C       W+ ++S+ S +K    AE  A ++F
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF 539



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 226/511 (44%), Gaps = 72/511 (14%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L+H   S  +++ Y+N+     +L LF    +  V+ W ++I    +       L  F E
Sbjct: 37  LSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVE 95

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK--- 120
           M   G   D      ++ + T M  L+ G  VH   ++ GM  D    N  +NMYAK   
Sbjct: 96  MRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLG 155

Query: 121 --------------------CGD-------------LNSSECTFSGMHCADTVSWNTIMS 147
                                GD             ++S    F  M   D VS+NTI++
Sbjct: 156 MGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIA 215

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   +   E  L   REMG +  + D+ +LSS +   +   ++  GK IH   I+ G + 
Sbjct: 216 GYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDS 275

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             Y+   +SL+ MY++   IE +ER F  + C+D +SWN+++ G+  NG++ EA  L  +
Sbjct: 276 DVYIG--SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQ 333

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M +   V+P      ++I  CA    L  G+ +HGY +R   G ++ + ++L+D YSK  
Sbjct: 334 M-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG 392

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           ++  A  +F+ +  + D VSW ++I G            LF+EM     + +    +A+L
Sbjct: 393 NIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNN---TIGVNALMHMYINCGDLVA-------AFSL 425
            +C+       G     W    G+ N+     G+N  +  Y    DL+        A++ 
Sbjct: 452 TACS-----HVGLVDEAW----GYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNF 502

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           + ++      S W+ ++ +C+ + + + A K
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEK 533



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 25/368 (6%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
            +S   +F     KDVV++N +I    ++      L    EM    ++ DS TL  ++  
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            ++   + +G+ +H   I+ G+ +D  + +  V+MYAK   +  SE  FS ++C D +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N++++G + N    + L  FR+M  +  +   V+ SS + A A L  L  GK +H   ++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
            G+  + +++  ++L+ MYS+CG+I+AA + F  M   D VSW AII G AL+G   EA 
Sbjct: 372 GGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAV 429

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L  EM+  + V+P+    V +++ C+   L+ E             GY     NS+   
Sbjct: 430 SLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDEA-----------WGY----FNSMTKV 473

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           Y  +  L      + A+A   DL+     +   +  +  +C + + S    +L SC+  +
Sbjct: 474 YGLNQELEH----YAAVA---DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHK 526

Query: 383 SLEFGKSI 390
           +LE  + +
Sbjct: 527 NLELAEKV 534



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 126/289 (43%), Gaps = 36/289 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  + +   +SL+  Y+  +  E S  +F     +D ++WN+++   V+N      L  
Sbjct: 271 KGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRL 330

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +MV   ++  +     ++ A   +  L  G+ +H   ++ G  ++  + +  V+MY+K
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ ++   F  M+  D VSW  I+ G   + +  + +  F EM   G + + V+  + 
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A + +G +             GY         NS+  +Y    ++E            
Sbjct: 451 LTACSHVGLVDEA---------WGY--------FNSMTKVYGLNQELE------------ 481

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
               + A+ D     GK EEA++ + +M     VEP  +   TL+S C+
Sbjct: 482 ---HYAAVADLLGRAGKLEEAYNFISKM----CVEPTGSVWSTLLSSCS 523



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 57/298 (19%), Positives = 122/298 (40%), Gaps = 28/298 (9%)

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           + K LH   +++   L     + +I++Y   + +  A  +F++  +  +  W  +I  F+
Sbjct: 23  QAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
                 +AL  F  +      P+     S+L +CT +  LR G+ +HG +  LG   + +
Sbjct: 82  DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 606 ISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
             +AL++MY+      +  S+ + +          E+     NSG    K+        C
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFD---------EMPQRTSNSGDEDVKA------ETC 186

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL---PIQPK 722
                +D   + +  M      R +   +  I+    +SG  ++A   ++ +    ++P 
Sbjct: 187 IMPFGIDSVRRVFEVM-----PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY-ISLSNMYVALGRWKDAVEI 779
                ++L   S + D   GK++   + +   ++  Y   SL +MY    R +D+  +
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299


>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
 gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 315/627 (50%), Gaps = 44/627 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV--VSWNA 247
           L  G+VIH   +K     S    + N L  +Y+ C ++E A   F  +    +  ++W+ 
Sbjct: 15  LVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I  +A N   E+A DL ++M L   V P   T   ++  CA    + +G+ +H +    
Sbjct: 74  MIRAYASNDFAEKALDLYYKM-LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCS 132

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               D+ +  +L+DFY+K   L  A  +F+ + P  D+V+WN+MISG            L
Sbjct: 133 DFATDMYVCTALVDFYAKCGELEMAIKVFDEM-PKRDMVAWNAMISGFSLHCCLTDVIGL 191

Query: 356 FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F +M  +     + ST++ + P+     +L  GK++H +  ++GFSN+ +    ++ +Y 
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA---SPDS 471
               ++ A  +   +    +   W+ +I    +N   +EA + F  M    N    +P +
Sbjct: 252 KSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
           + L+  +  C        G+ +H  A+K+   LD  VQN +I+ Y +   +  A   F  
Sbjct: 311 IGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
               ++ ++N +I+    N     +  LF  +      P+  +++ +L+AC+ L  L HG
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428

Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYH 633
              HG+    G+  N+ I +AL+DMY+ C               +   +W++M+  +G H
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488

Query: 634 GKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETE 692
           G G EA+ LF+ M  +G+ P + +++++LSACSHSGLVDEG Q +N+M   +++V P  +
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRID 548

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C+ D+L R+G L EAY+F+  +P +P   V G +LSAC  + + ++G +V++ +  L
Sbjct: 549 HYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL 608

Query: 753 EPENVGYYISLSNMYVALGRWKDAVEI 779
             E     + LSN Y A  RW+DA  I
Sbjct: 609 -GETTESLVLLSNTYSAAERWEDAARI 634



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 285/596 (47%), Gaps = 46/596 (7%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNM---YAKCGDLNSSECTFSGMHCA--DTVSWNTIM 146
           G+V+H   +K  +   SS   V VN+   YA C ++  +   F  +     + ++W+ ++
Sbjct: 18  GQVIHQHLLKRSLTLSSS--TVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMI 75

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
                N++ EK L  + +M  SG +    +    + A A L  +  GK+IH+      + 
Sbjct: 76  RAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFA 135

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
              YV    +L+  Y++CG++E A + F  M  +D+V+WNA+I GF+L+    +   L  
Sbjct: 136 TDMYVC--TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
           +M+ +  + P+++T+V +      +  LREG++VHGY  R     DL++   ++D Y+KS
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGLFK-EMLYLCSQFSFSTLL------------- 372
             +  A  +F+     N+ V+W++MI G  + EM+    +  F  L+             
Sbjct: 254 KCIIYARRVFDLDFKKNE-VTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            IL  C     L  G+ +HC+ +K GF  +    N ++  Y   G L  AF     I   
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   +N +I  C  N   +E+ + F  M +     PD  TL+ V++AC +L     G S
Sbjct: 373 -DVISYNSLITGCVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVLTACSHLAALGHGSS 430

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            HG  +     ++T + NAL+ MY +C  +  A  VF++ +  ++ +WN M+  F  +  
Sbjct: 431 CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGL 490

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL LF  ++     P+E+++++ILSAC+  G++  GKQ+   +         F    
Sbjct: 491 GKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM-----SRGDFNVIP 545

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
            +D Y NC ++     +++  GY     EA +  ++M      P    + +LLSAC
Sbjct: 546 RIDHY-NCMTD-----LLARAGYLD---EAYDFVNKM---PFEPDIRVLGTLLSAC 589



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 269/612 (43%), Gaps = 50/612 (8%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDV--VTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +L   Y++ +  E +  +F E  +  +  + W+ MI A   N      L  + +M+  G
Sbjct: 39  VNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG 98

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +R    T   ++ A   +  +  G+++H     +    D  +C   V+ YAKCG+L  + 
Sbjct: 99  VRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158

Query: 129 CTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
             F  M   D V+WN ++SG  LH    +   L+       G   +  ++     A    
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  GK +H    ++G+ +   + V   ++ +Y++   I  A R F     K+ V+W+A
Sbjct: 219 GALREGKAVHGYCTRMGFSND--LVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSA 276

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL-CADSLLLREGRSVHGYAIR 306
           +I G+  N   +EA ++  +M +  +V       + LI + CA    L  GR VH YA++
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVK 336

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
                DL + N+++ FY+K  SL  A   F+ I  + D++S+NS+I+G            
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG-LKDVISYNSLITGCVVNCRPEESFR 395

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LF EM     +   +TLL +L +C+   +L  G S H + +  G++ NT   NALM MY 
Sbjct: 396 LFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYT 455

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
            CG L  A  +   + H  D   WN ++     +G  +EA+  F SM Q+   +PD VTL
Sbjct: 456 KCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIHGLGKEALSLFNSM-QETGVNPDEVTL 513

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN 534
           + ++SAC +  L  EGK L     +    +  R+ +                        
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH------------------------ 549

Query: 535 CNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
                +NCM    ++      A +    + FEP+   + ++LSAC        G ++   
Sbjct: 550 -----YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKK 604

Query: 595 VFHLGFQENSFI 606
           +  LG    S +
Sbjct: 605 MQSLGETTESLV 616



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 239/508 (47%), Gaps = 33/508 (6%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +   T+L+  Y+     E ++ +F E   +D+V WNAMI+    + C+   +  F 
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193

Query: 63  EMVE-EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           +M   +G+  + +T++ +  AL +   L++G+ VH    + G   D  +    +++YAK 
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             +  +   F      + V+W+ ++ G + N   ++    F +M  +    DNV++ + V
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN----DNVAMVTPV 309

Query: 182 A------ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           A        A  G+LS G+ +H   +K G+     ++V N++IS Y++ G +  A R F 
Sbjct: 310 AIGLILMGCARFGDLSGGRCVHCYAVKAGFILD--LTVQNTIISFYAKYGSLCDAFRQFS 367

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            +  KDV+S+N++I G  +N + EE+F L HEM+    + PDI T++ +++ C+    L 
Sbjct: 368 EIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLLGVLTACSHLAALG 426

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM---- 351
            G S HGY +      +  + N+LMD Y+K   L  A+ +F+ +    D+VSWN+M    
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK-RDIVSWNTMLFGF 485

Query: 352 -ISGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
            I GL KE L L +    +       TLLAIL +C+    ++ GK +     +  F  N 
Sbjct: 486 GIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDF--NV 543

Query: 404 IG----VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           I      N +  +    G L  A+  + ++    D      ++ AC    + +   +  K
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELA 487
            M      +   V L N  SA    E A
Sbjct: 604 KMQSLGETTESLVLLSNTYSAAERWEDA 631



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 17/362 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-MGLHF 60
           GF   L   T +L  Y+       +  +F     K+ VTW+AMI   VEN  +   G  F
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294

Query: 61  FGEMVEEGIRFDSTTLL-IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  +V + +   +   + +I+    +   L  GR VHC ++KAG I D ++ N  ++ YA
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K G L  +   FS +   D +S+N++++GC+ N  PE+    F EM  SG + D  +L  
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A + L  L +G   H   +  GY  +   S+ N+L+ MY++CG ++ A+R F  M  
Sbjct: 415 VLTACSHLAALGHGSSCHGYCVVHGY--AVNTSICNALMDMYTKCGKLDVAKRVFDTMHK 472

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D+VSWN ++ GF ++G  +EA  L + MQ    V PD  T++ ++S C+ S L+ EG+ 
Sbjct: 473 RDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDEGKQ 531

Query: 300 VHGY-------AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +           I R+  Y     N + D  +++  L +A    N +    D+    +++
Sbjct: 532 LFNSMSRGDFNVIPRIDHY-----NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLL 586

Query: 353 SG 354
           S 
Sbjct: 587 SA 588


>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 680

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 196/657 (29%), Positives = 304/657 (46%), Gaps = 77/657 (11%)

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           A +     G  IHA   K G  +  +++  N+LISMY++  ++  AE+ F  MT +++V+
Sbjct: 14  ATVRAFKRGNAIHAYLRKFGGLNDVFLA--NNLISMYAEFFNVRDAEKVFDEMTDRNIVT 71

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W  ++  F   G+  EA  L ++M   +S  P+      ++  C     L  G+ +    
Sbjct: 72  WTTMVSAFTDGGRPYEAIRLYNDMP--KSETPNGYMYSAVLKACGFVGDLGLGKLIQERI 129

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA------------------------ 340
               L  D ++MNSLMD + K  SL+ A  +F+ I+                        
Sbjct: 130 YEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAE 189

Query: 341 ------PMNDLVSWNSMISGL----------FKEMLY----LCSQFSFSTLLAILPSCNS 380
                 P  ++VSWNSMI+G           F  M++        F+F   L I    ++
Sbjct: 190 KLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKI----SA 245

Query: 381 PESLEF-GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL-QRISHNSDTS-- 436
              L F GK +H +  KLG+ ++   ++AL+ MY NC DL+ A  L  Q  S N+  S  
Sbjct: 246 LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDN 305

Query: 437 --CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              WN ++     N   Q A+    S      A  DS T    +  C NL     G  LH
Sbjct: 306 LALWNSMLSGYVINNCDQAALNLL-SEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLH 364

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
           GL +     LD  V + L+ +Y +  +I  A  +F      ++  W+ +I   +Q     
Sbjct: 365 GLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNW 424

Query: 555 RALELFRHLEFEPNEIS---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
            A  +F+ +    NEI    I +IL  C+ L  LR GKQ+H      G++   F  ++LL
Sbjct: 425 LAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMYS C               K   +W+ +I   G +GK  EA+  FHEM  SGI P + 
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           + + +LSAC ++GLV+E    +N+M   Y + P  EH+ C+VD+L   G  +EA + I N
Sbjct: 545 TFLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIAN 604

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           +P +P    W  +L AC    DTK+  +VA+ L +  P +   Y++LSN Y +LG W
Sbjct: 605 MPFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLSNAYASLGMW 661



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/626 (23%), Positives = 276/626 (44%), Gaps = 85/626 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +  + +L++ Y+       +  +F E  ++++VTW  M++A  +       +  +
Sbjct: 33  GGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTMVSAFTDGGRPYEAIRLY 92

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M +     +      ++ A   +  L  G+++     +  + AD+ L N  ++M+ KC
Sbjct: 93  NDMPKSETP-NGYMYSAVLKACGFVGDLGLGKLIQERIYEDKLQADTILMNSLMDMFVKC 151

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG---------------CLH--------------- 151
           G LN +   F  +  A T +WN I+SG               C+                
Sbjct: 152 GSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEKLFHCMPHPNVVSWNSMIAGFA 211

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           +N  ++ L +   M     + D+ +   A+  SA  G L  GK +H+   KLGYE S + 
Sbjct: 212 DNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHGLLFIGKQVHSYVTKLGYESSCF- 270

Query: 212 SVTNSLISMYSQCGD-IEAAE-----RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
              ++LI MYS C D IEA +      +F      ++  WN+++ G+ +N   + A +LL
Sbjct: 271 -TLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLALWNSMLSGYVINNCDQAALNLL 329

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
            E+    ++  D  T    + +C + L  R G  +HG  +      D ++ + L+D Y+K
Sbjct: 330 SEIHCSGAL-LDSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAK 388

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA 373
             ++  A  +F+ + P  D+++W+ +I G            +FK ML L ++     +  
Sbjct: 389 LANIDDALAIFHRL-PRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVIST 447

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
           IL  C++  SL  GK +H   +K G+      + +L+ MY  CG++  A +L        
Sbjct: 448 ILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFC-CEQEK 506

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   W  +IV C QNG   EA++ F  M  +   +P+ +T + V+SAC    L  E +S+
Sbjct: 507 DIVSWTGIIVGCGQNGKAAEAVRFFHEMI-RSGITPNEITFLGVLSACRYAGLVEEARSI 565

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
              ++KS+ GL+  +++                             + CM+   +     
Sbjct: 566 FN-SMKSVYGLEPHLEH-----------------------------YCCMVDLLASVGLP 595

Query: 554 VRALELFRHLEFEPNEISIVSILSAC 579
             A +L  ++ FEPN+ +  ++L AC
Sbjct: 596 EEAEKLIANMPFEPNQTTWRTLLGAC 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 243/561 (43%), Gaps = 66/561 (11%)

Query: 86  MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           +   K+G  +H    K G + D  L N  ++MYA+  ++  +E  F  M   + V+W T+
Sbjct: 16  VRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNIVTWTTM 75

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S       P + +  + +M  S E  +    S+ + A   +G+L  GK+I     +  Y
Sbjct: 76  VSAFTDGGRPYEAIRLYNDMPKS-ETPNGYMYSAVLKACGFVGDLGLGKLIQ----ERIY 130

Query: 206 EDSPYVS--VTNSLISMYSQCGDIE-------------------------------AAER 232
           ED       + NSL+ M+ +CG +                                 AE+
Sbjct: 131 EDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEAEK 190

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F  M   +VVSWN++I GFA NG  + A + +  M   R ++ D  T    + + A   
Sbjct: 191 LFHCMPHPNVVSWNSMIAGFADNGS-QRALEFVSMMH-KRCIKLDDFTFPCALKISALHG 248

Query: 293 LLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-----DL 345
           LL  G+ VH Y  +  LGY+     +++L+D YS  N L +A  LF+  +  N     +L
Sbjct: 249 LLFIGKQVHSYVTK--LGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNL 306

Query: 346 VSWNSMISGLF-----KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCW 393
             WNSM+SG       +  L L S+   S       T    L  C +  S   G  +H  
Sbjct: 307 ALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGL 366

Query: 394 QLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            +  G+  + +  + L+ +Y    ++  A ++  R+    D   W+ +I+ C Q G    
Sbjct: 367 IVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPR-KDIIAWSGLIMGCAQIGLNWL 425

Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
           A   FK M +  N   D   +  ++  C NL     GK +H L +KS   ++     +L+
Sbjct: 426 AFSMFKGMLELVN-EIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLL 484

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
            MY +C +I+ A T+F      ++ +W  +I    QN     A+  F  +      PNEI
Sbjct: 485 DMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEI 544

Query: 571 SIVSILSACTQLGVLRHGKQI 591
           + + +LSAC   G++   + I
Sbjct: 545 TFLGVLSACRYAGLVEEARSI 565



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 116/497 (23%), Positives = 194/497 (39%), Gaps = 99/497 (19%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           L  C +  + + G +IH +  K G  N+    N L+ MY    ++  A  +   ++ + +
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT-DRN 68

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
              W  ++ A T  G   EAI+ +  M + +  +P+      V+ ACG +     GK + 
Sbjct: 69  IVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE--TPNGYMYSAVLKACGFVGDLGLGKLIQ 126

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
               +  +  DT + N+L+ M+ +C  +  A  VF +       TWN ++S +S+    V
Sbjct: 127 ERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMV 186

Query: 555 RALELFRHLEFEPNEISIVSILSA-------------------CTQL------------- 582
            A +LF H    PN +S  S+++                    C +L             
Sbjct: 187 EAEKLF-HCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISA 245

Query: 583 --GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS--------------NAA---- 622
             G+L  GKQ+H +V  LG++ + F  SAL+DMYSNC                NA+    
Sbjct: 246 LHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDN 305

Query: 623 ---WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYN 679
              W+SM+S Y  +     A+ L  E+  SG      +    L  C +      GLQ + 
Sbjct: 306 LALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHG 365

Query: 680 NMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPKPG------------- 724
            ++       E ++ V   +VD+  +   + +A      LP +                 
Sbjct: 366 LIVT---CGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGL 422

Query: 725 ---------------------VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI-S 762
                                V   +L  CS+    + GKQV  L  K   E  G+ I S
Sbjct: 423 NWLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITS 482

Query: 763 LSNMYVALGRWKDAVEI 779
           L +MY   G  +DA+ +
Sbjct: 483 LLDMYSKCGEIEDALTL 499



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 26/200 (13%)

Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
           I   L  C  +   + G  IH ++   G   + F+++ L+ MY+                
Sbjct: 6   IAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMT 65

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL- 675
            ++   W++M+SA+   G+ +EAI L+++M  S   P      ++L AC   G  D GL 
Sbjct: 66  DRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSET-PNGYMYSAVLKACGFVG--DLGLG 122

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           +     + E  ++ +T     ++DM  + G L +A E   N+  +     W  ++S    
Sbjct: 123 KLIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTTWNIIVS---- 177

Query: 736 HGDTKMGKQV-AELLFKLEP 754
            G +K G  V AE LF   P
Sbjct: 178 -GYSKAGLMVEAEKLFHCMP 196


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 181/622 (29%), Positives = 314/622 (50%), Gaps = 50/622 (8%)

Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
           IHA  I  G+  +P  ++++ LI  Y+  G +  + + F  +   ++  +NAI+      
Sbjct: 46  IHARFILHGFHQNP--TLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRY 103

Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL-- 313
           G+ E    L+++  + +S+ PD  T   ++  C+    +  GR++HGY ++  LG+DL  
Sbjct: 104 GESERTL-LVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVK--LGFDLFD 160

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------GLFKEMLYLC 363
           ++  +L + Y +      A  LF+  + + DL  W S ++          G+F+    + 
Sbjct: 161 VVATALAEMYEECIEFENAHQLFDKRS-VKDL-GWPSSLTTEGPQNDNGEGIFRVFGRMI 218

Query: 364 SQ------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           ++      F+F  LL  +   NS   ++  K +HC  +    S + +   A++ +Y    
Sbjct: 219 AEQLVPDSFTFFNLLRFIAGLNS---IQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLR 275

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            LV A  L  ++    D   WNI+I A  + G   E ++ FKSM +    S D  T + V
Sbjct: 276 SLVDARKLFDKMPEK-DRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS-DLFTALPV 333

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           IS+   L+    GK  H   L++       V N+LI MY  C+ + SA  +F    + ++
Sbjct: 334 ISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSV 393

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W+ MI  + +N   + AL LF  ++    + + + +++IL A   +G L + K +HG+
Sbjct: 394 ISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGY 453

Query: 595 VFHLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGW 637
              LG      +++ALL  Y+ C                 K    W+SMISA+  HG   
Sbjct: 454 SMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWS 513

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +  +L++ M  S  +P + + + LL+AC +SGLV++G +++  M E Y  +P  EH+ C+
Sbjct: 514 QCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACM 573

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
           V++LGR+G + EA E +KN+PI+P   VWG +LSAC  H  +K+ +  AE L  +EP N 
Sbjct: 574 VNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNA 633

Query: 758 GYYISLSNMYVALGRWKDAVEI 779
           G YI LSN+Y A G+W    ++
Sbjct: 634 GNYILLSNIYAAAGKWDGVAKM 655



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 265/609 (43%), Gaps = 50/609 (8%)

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            ++ N ++  + +H   I  G   + +L +  ++ YA  G LN S   F  +   +   +
Sbjct: 34  FSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLF 93

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N I+         E+ LL +++M       D  +    + + +    + +G+ IH   +K
Sbjct: 94  NAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVK 153

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LG++   +  V  +L  MY +C + E A + F   + KD+   +++      N   E  F
Sbjct: 154 LGFD--LFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIF 211

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            +   M +   + PD  T   L+   A    ++  + VH  AI   L  DLL+  +++  
Sbjct: 212 RVFGRM-IAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSL 270

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           YSK  SL  A  LF+ + P  D V WN MI+             LFK M     +    T
Sbjct: 271 YSKLRSLVDARKLFDKM-PEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFT 329

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
            L ++ S    + +++GK  H   L+ G  +     N+L+ MY  C  L +A  +   ++
Sbjct: 330 ALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMT 389

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
             S  S W+ +I    +NG    A+  F  M +      D V ++N++ A  ++      
Sbjct: 390 DKSVIS-WSAMIKGYVKNGQSLTALSLFSKM-KSDGIQADFVIMINILPAFVHIGALENV 447

Query: 491 KSLHG----LALKSLMGLDTRVQNALITMYGRCRDIKSASTVF--ESCYNCNLCTWNCMI 544
           K LHG    L L SL  L+T    AL+  Y +C  I+ A  +F  E   + +L  WN MI
Sbjct: 448 KYLHGYSMKLGLTSLPSLNT----ALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMI 503

Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           SA + +    +  +L+  ++    +P++++ + +L+AC   G++  GK+         F+
Sbjct: 504 SAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEF--------FK 555

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
           E       + + Y    S   ++ M++  G  G   EA EL   M    I+P       L
Sbjct: 556 E-------MTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNM---PIKPDARVWGPL 605

Query: 662 LSACS-HSG 669
           LSAC  H G
Sbjct: 606 LSACKMHPG 614



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  +T++L+ YS +     +  LF +   KD V WN MI A          L  F  M  
Sbjct: 261 LLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMAR 320

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            GIR D  T L ++S++ Q+ C+  G+  H   ++ G  +  S+ N  ++MY +C  L+S
Sbjct: 321 SGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDS 380

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F+ M     +SW+ ++ G + N      L  F +M   G QAD V + + + A   
Sbjct: 381 ACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVH 440

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF--WGMTCKDVVS 244
           +G L   K +H   +KLG    P  S+  +L+  Y++CG IE A+R F    +  KD++ 
Sbjct: 441 IGALENVKYLHGYSMKLGLTSLP--SLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIM 498

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           WN++I   A +G + + F L + M+   S +PD  T + L++ C +S L+ +G+
Sbjct: 499 WNSMISAHANHGDWSQCFKLYNRMKCSNS-KPDQVTFLGLLTACVNSGLVEKGK 551



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 230/511 (45%), Gaps = 19/511 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +T+L   Y     FE++  LF +   KD+   +++ T   +N         FG M+ E 
Sbjct: 162 VATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQ 221

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  DS T   ++  +  +N ++  ++VHC++I + +  D  +    +++Y+K   L  + 
Sbjct: 222 LVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDAR 281

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D V WN +++       P +CL  F+ M  SG ++D  +    +++ A L 
Sbjct: 282 KLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLK 341

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            + +GK  HA  ++ G +    VSV NSLI MY +C  +++A + F  MT K V+SW+A+
Sbjct: 342 CVDWGKQTHAHILRNGSDSQ--VSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAM 399

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+  NG+   A  L  +M+    ++ D   ++ ++        L   + +HGY+++  
Sbjct: 400 IKGYVKNGQSLTALSLFSKMK-SDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLG 458

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMISG------------L 355
           L     +  +L+  Y+K  S+  A+ LF        DL+ WNSMIS             L
Sbjct: 459 LTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKL 518

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYI 414
           +  M    S+    T L +L +C +   +E GK       +  G   +      ++++  
Sbjct: 519 YNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLG 578

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN-GHFQEAIKTFKSMTQQQNASPDSVT 473
             G +  A  L++ +    D   W  ++ AC  + G         K +  +   + + + 
Sbjct: 579 RAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYIL 638

Query: 474 LVNVISACGNLELAFEGKS-LHGLALKSLMG 503
           L N+ +A G  +   + +S L    LK + G
Sbjct: 639 LSNIYAAAGKWDGVAKMRSFLRNKGLKKIPG 669



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 218/507 (42%), Gaps = 22/507 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   S+ L+  Y+N+     SL +F    + ++  +NA++            L  +
Sbjct: 54  GFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVY 113

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +MV + +  D  T   ++ + +  + +  GR +H   +K G      +      MY +C
Sbjct: 114 QQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEEC 173

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            +  ++   F      D    +++ +    N+  E     F  M       D+ +  + +
Sbjct: 174 IEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLL 233

Query: 182 AASACLGELSYGKVIHALGI--KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
              A L  +   K++H + I  KL  +    + V  +++S+YS+   +  A + F  M  
Sbjct: 234 RFIAGLNSIQLAKIVHCIAIVSKLSGD----LLVNTAVLSLYSKLRSLVDARKLFDKMPE 289

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD V WN +I  +A  GK  E  +L   M     +  D+ T + +IS  A    +  G+ 
Sbjct: 290 KDRVVWNIMIAAYAREGKPTECLELFKSMA-RSGIRSDLFTALPVISSIAQLKCVDWGKQ 348

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
            H + +R      + + NSL+D Y +   L  A  +FN +     ++SW++MI G     
Sbjct: 349 THAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTD-KSVISWSAMIKGYVKNG 407

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                  LF +M     Q  F  ++ ILP+     +LE  K +H + +KLG ++      
Sbjct: 408 QSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNT 467

Query: 408 ALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
           AL+  Y  CG +  A  L +     + D   WN +I A   +G + +  K +  M +  N
Sbjct: 468 ALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRM-KCSN 526

Query: 467 ASPDSVTLVNVISACGNLELAFEGKSL 493
           + PD VT + +++AC N  L  +GK  
Sbjct: 527 SKPDQVTFLGLLTACVNSGLVEKGKEF 553


>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 252/470 (53%), Gaps = 41/470 (8%)

Query: 341 PMNDLVSWNSMISGL------------FKEMLYLCS--QFSFSTLLAILPSCNSPESLEF 386
           PM D +SWNS ISGL            FK+ LY     QF  +TL  +L +C+ PE    
Sbjct: 2   PMKDTISWNSRISGLLGNGDIEMGFRVFKQ-LYESGIYQFDQATLTTVLTACDKPEFCYV 60

Query: 387 GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
            K IH      G+       NAL+  Y  CG   +   +   +S   +   W  VI   +
Sbjct: 61  SKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK-NVVTWTAVISGLS 119

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           Q   ++E++K F  M +     P+S+T ++ + AC  L+   EG+ +HGL  K  +  D 
Sbjct: 120 QGQFYEESLKLFGKM-RDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDL 178

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE-- 564
            +++AL+ MY +C  ++ A  +FES    +  +   ++   +QN  E  ++++F  +   
Sbjct: 179 CIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKN 238

Query: 565 ---FEPNEIS-IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
               +PN IS I+ +    T L +   GKQIH  +    F  N F+++ L++MYS C   
Sbjct: 239 GVVIDPNMISAILGVFGIDTSLAL---GKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDL 295

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +++ +W+SMI+A+  HG G  A++L+ EM   G+ PT  + +SLL AC
Sbjct: 296 DDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHAC 355

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           +H GLV++G+ +  +M ++Y + P  EH+ C+VDM+GR+G L EA +FI+ LP +P   V
Sbjct: 356 AHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILV 415

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
           W A+L ACS HG+++MGK  A  LF   PE+   YI L+N+Y + G+WK+
Sbjct: 416 WQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKE 465



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 21/428 (4%)

Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG-EQADNVSLSSAVAASACLGELSY 192
           M   DT+SWN+ +SG L N   E     F+++  SG  Q D  +L++ + A         
Sbjct: 1   MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 60

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
            K+IH+L    GYE    ++V N+LI+ Y +CG   +  R F  M+ K+VV+W A+I G 
Sbjct: 61  SKMIHSLVFLYGYERE--ITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGL 118

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
           +    +EE+  L  +M+    V+P+  T ++ +  C+    +REGR +HG   +  + +D
Sbjct: 119 SQGQFYEESLKLFGKMR-DGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFD 177

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           L + ++LMD YSK  SL  A  +F + A   D VS   ++ GL            F +M+
Sbjct: 178 LCIESALMDMYSKCGSLEDAWKIFES-AEEVDEVSMTVILVGLAQNGFEEESIQVFVKMV 236

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                   + + AIL       SL  GK IH   +K  F +N    N L++MY  CGDL 
Sbjct: 237 KNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLD 296

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            +  +   +   +  S WN +I A  ++G+   A++ ++ M + +   P  VT ++++ A
Sbjct: 297 DSIKIFCWMPQRNSVS-WNSMIAAFARHGNGSRALQLYEEM-RLEGVWPTDVTFLSLLHA 354

Query: 481 CGNLELAFEGKS-LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLC 538
           C ++ L  +G   L  +A    +G        ++ M GR   +  A    E       + 
Sbjct: 355 CAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGIL 414

Query: 539 TWNCMISA 546
            W  ++ A
Sbjct: 415 VWQALLGA 422



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 222/502 (44%), Gaps = 50/502 (9%)

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
           M  KD +SWN+ I G   NG  E  F +  ++      + D AT+ T+++ C        
Sbjct: 1   MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYV 60

Query: 297 GRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            + +H      L GY  ++ + N+L+  Y +    S    +F+ ++  N +V+W ++ISG
Sbjct: 61  SKMIHSLVF--LYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKN-VVTWTAVISG 117

Query: 355 LFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
           L +   Y  S   F             T L+ L +C+  +++  G+ IH    KLG   +
Sbjct: 118 LSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFD 177

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +ALM MY  CG L  A+ + +  +   D     +++V   QNG  +E+I+ F  M 
Sbjct: 178 LCIESALMDMYSKCGSLEDAWKIFES-AEEVDEVSMTVILVGLAQNGFEEESIQVFVKMV 236

Query: 463 QQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
             +N       +++ I     ++ +   GK +H L +K   G +  V N LI MY +C D
Sbjct: 237 --KNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGD 294

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSA 578
           +  +  +F      N  +WN MI+AF+++    RAL+L+  +  E   P +++ +S+L A
Sbjct: 295 LDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHA 354

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWE 638
           C  +G++  G         +GF E      ++   Y        ++ ++   G  G   E
Sbjct: 355 CAHVGLVEKG---------MGFLE------SMAKDYGIGPRMEHYACVVDMMGRAGLLNE 399

Query: 639 AIELFHEMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
           A +    +      P K  ++   +LL ACS  G  + G    N +  +    P    ++
Sbjct: 400 AKKFIERL------PEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAP--YI 451

Query: 696 CIVDMLGRSGKLQEAYEFIKNL 717
            + ++    GK +E    IK +
Sbjct: 452 LLANIYSSEGKWKERARTIKKM 473



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 4/352 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +    +L+T+Y       S   +F E   K+VVTW A+I+   + +     L  F
Sbjct: 72  GYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLF 131

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G+M +  +  +S T L  + A + +  +++GR +H L  K G+  D  + +  ++MY+KC
Sbjct: 132 GKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKC 191

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  +   F      D VS   I+ G   N + E+ +  F +M  +G   D   +S+ +
Sbjct: 192 GSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAIL 251

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
                   L+ GK IH+L IK  +  + +V+  N LI+MYS+CGD++ + + F  M  ++
Sbjct: 252 GVFGIDTSLALGKQIHSLIIKKSFGSNYFVN--NGLINMYSKCGDLDDSIKIFCWMPQRN 309

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-V 300
            VSWN++I  FA +G    A  L  EM+L   V P   T ++L+  CA   L+ +G   +
Sbjct: 310 SVSWNSMIAAFARHGNGSRALQLYEEMRL-EGVWPTDVTFLSLLHACAHVGLVEKGMGFL 368

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              A    +G  +     ++D   ++  L++A+     +     ++ W +++
Sbjct: 369 ESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALL 420



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 207/464 (44%), Gaps = 21/464 (4%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-RFDSTTLLIIVSALTQMNCLKQGRV 94
           KD ++WN+ I+  + N  + MG   F ++ E GI +FD  TL  +++A  +       ++
Sbjct: 4   KDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKM 63

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H L    G   + ++ N  +  Y +CG  +S    F  M   + V+W  ++SG     +
Sbjct: 64  IHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQF 123

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E+ L  F +M       ++++  S++ A + L  +  G+ IH L  KLG      + + 
Sbjct: 124 YEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFD--LCIE 181

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM-QLMRS 273
           ++L+ MYS+CG +E A + F      D VS   I+ G A NG  EE+  +  +M +    
Sbjct: 182 SALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVV 241

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           ++P++ + +  +     SL L  G+ +H   I++  G +  + N L++ YSK   L  + 
Sbjct: 242 IDPNMISAILGVFGIDTSLAL--GKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSI 299

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F    P  + VSWNSMI+             L++EM       +  T L++L +C   
Sbjct: 300 KIF-CWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHV 358

Query: 382 ESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +E G   +       G          ++ M    G L  A   ++R+        W  
Sbjct: 359 GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 418

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGN 483
           ++ AC+ +G+ +        +  Q   SP   + L N+ S+ G 
Sbjct: 419 LLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGK 462


>gi|302787545|ref|XP_002975542.1| hypothetical protein SELMODRAFT_103455 [Selaginella moellendorffii]
 gi|300156543|gb|EFJ23171.1| hypothetical protein SELMODRAFT_103455 [Selaginella moellendorffii]
          Length = 678

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 183/631 (29%), Positives = 305/631 (48%), Gaps = 43/631 (6%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ GK IH     L  E +  +S+ +SL+ MY QCG ++ A  AF  M   +  SWNA I
Sbjct: 27  LAEGKCIHHQVRTLDLEGN--LSIGSSLLKMYLQCGSLDGARVAFSRMDLTEPESWNAAI 84

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS----LCADSLLLREGRSVHGYAI 305
             FA  G + EA  +   M+ + SV P+  T+VT+++    L  D   L   R +H   +
Sbjct: 85  AAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLAIAREIHTTIV 144

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------ 353
            +    D  +  SLM  Y +   L +AE +F ++    D VSW+ MIS            
Sbjct: 145 AKKKEMDACVATSLMGLYGRFGCLPEAESIFQSLG-FKDRVSWSVMISAYAHNGRKDLAL 203

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
           G F+EM +   + +    + +L +  SP  L  G+ IH   ++ G  N  I   AL+ MY
Sbjct: 204 GFFREMQFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNKVILATALITMY 263

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
             CG   A+  + +R ++  D   WN +I A   NG F+++++ F  + +    +P+ VT
Sbjct: 264 GRCGSPSASIRVFRR-TNPKDLISWNSMIGAYAHNGEFEKSMRIFHQLLKATYVAPNRVT 322

Query: 474 LVNVISACGNL-ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
            + ++   G   E A   K +        +G D  V  AL++ YG+C     A  +F+  
Sbjct: 323 FLTLLGGLGTSNENARHAKVVEREITSRGLGTDAVVATALMSAYGKCGHAGEAHRIFDGI 382

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              N+ +WN MISA++ +     AL+L+  +  E   P  ++ V+ L AC++L  +  G 
Sbjct: 383 EPRNVVSWNSMISAYAHSHRHELALDLYHRMLHEGVNPTMVTFVAALGACSELADVAEGG 442

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           +I   V   G + +  + +A++DMY  C               K    WS++ +AY + G
Sbjct: 443 KILSCVTDSGLELDHVLGTAVVDMYGKCGNLRRAREIFDGMKKKDVVVWSALAAAYSHRG 502

Query: 635 KGWE----AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
                   A+++FH M   G+ P   + + +LSAC ++GLVD+G  Y++++  ++ +   
Sbjct: 503 NDRSQLHTALKVFHWMQQEGVHPGSVAFLGVLSACRNAGLVDQGCAYFSSITSDHGLEVT 562

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           +E   C+VD+LGR+G L EA      +        W  +L AC    D +  K+ AE + 
Sbjct: 563 SEQLGCVVDLLGRAGWLAEAEALAARMAGGGDSCAWMMLLGACRDGRDVERAKRAAERVL 622

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           + +P+N   Y+ LS +Y A GR  DA  + +
Sbjct: 623 ERDPKNAMAYVMLSQVYAAEGRMDDARSVRR 653



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 234/525 (44%), Gaps = 34/525 (6%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
            +L   +SLL  Y      + +   F      +  +WNA I A  +       +  F  M
Sbjct: 44  GNLSIGSSLLKMYLQCGSLDGARVAFSRMDLTEPESWNAAIAAFAQEGHYSEAMKVFERM 103

Query: 65  VEEG-IRFDSTTLLIIVSALT----QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            E G +  +S T++ +++ L         L   R +H   +      D+ +    + +Y 
Sbjct: 104 KELGSVAPNSITIVTVLNVLKLLPLDFKSLAIAREIHTTIVAKKKEMDACVATSLMGLYG 163

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           + G L  +E  F  +   D VSW+ ++S   HN   +  L +FREM + G + + +   +
Sbjct: 164 RFGCLPEAESIFQSLGFKDRVSWSVMISAYAHNGRKDLALGFFREMQFEGMKPNQIVFVN 223

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A    G+L  G+ IH+L I+ G ++   V +  +LI+MY +CG   A+ R F     
Sbjct: 224 VLNALGSPGDLLDGERIHSLVIQAGMQNK--VILATALITMYGRCGSPSASIRVFRRTNP 281

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI-SLCADSLLLREGR 298
           KD++SWN++I  +A NG+FE++  + H++     V P+  T +TL+  L   +   R  +
Sbjct: 282 KDLISWNSMIGAYAHNGEFEKSMRIFHQLLKATYVAPNRVTFLTLLGGLGTSNENARHAK 341

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
            V      R LG D ++  +LM  Y K     +A  +F+ I P N +VSWNSMIS     
Sbjct: 342 VVEREITSRGLGTDAVVATALMSAYGKCGHAGEAHRIFDGIEPRN-VVSWNSMISAYAHS 400

Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
                   L+  ML+     +  T +A L +C+    +  G  I       G   + +  
Sbjct: 401 HRHELALDLYHRMLHEGVNPTMVTFVAALGACSELADVAEGGKILSCVTDSGLELDHVLG 460

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG----HFQEAIKTFKSMT 462
            A++ MY  CG+L  A  +   +    D   W+ +  A +  G        A+K F  M 
Sbjct: 461 TAVVDMYGKCGNLRRAREIFDGMK-KKDVVVWSALAAAYSHRGNDRSQLHTALKVFHWM- 518

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG-------KSLHGLALKS 500
           QQ+   P SV  + V+SAC N  L  +G        S HGL + S
Sbjct: 519 QQEGVHPGSVAFLGVLSACRNAGLVDQGCAYFSSITSDHGLEVTS 563



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/538 (23%), Positives = 236/538 (43%), Gaps = 36/538 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++    Q   L +G+ +H       +  + S+ +  + MY +CG L+ +   FS M   +
Sbjct: 17  LIKHYAQSKSLAEGKCIHHQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFSRMDLTE 76

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACL----GELSYG 193
             SWN  ++      +  + +  F  M   G  A N +++ + +     L      L+  
Sbjct: 77  PESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLAIA 136

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           + IH   +    E      V  SL+ +Y + G +  AE  F  +  KD VSW+ +I  +A
Sbjct: 137 REIHTTIVAKKKEMD--ACVATSLMGLYGRFGCLPEAESIFQSLGFKDRVSWSVMISAYA 194

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            NG+ + A     EMQ    ++P+    V +++       L +G  +H   I+  +   +
Sbjct: 195 HNGRKDLALGFFREMQF-EGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNKV 253

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF-- 366
           ++  +L+  Y +  S S +  +F    P  DL+SWNSMI     +G F++ + +  Q   
Sbjct: 254 ILATALITMYGRCGSPSASIRVFRRTNP-KDLISWNSMIGAYAHNGEFEKSMRIFHQLLK 312

Query: 367 ---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                    +F TLL  L + N  E+    K +       G   + +   ALM  Y  CG
Sbjct: 313 ATYVAPNRVTFLTLLGGLGTSN--ENARHAKVVEREITSRGLGTDAVVATALMSAYGKCG 370

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               A  +   I   +  S WN +I A   +   + A+  +  M   +  +P  VT V  
Sbjct: 371 HAGEAHRIFDGIEPRNVVS-WNSMISAYAHSHRHELALDLYHRML-HEGVNPTMVTFVAA 428

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           + AC  L    EG  +      S + LD  +  A++ MYG+C +++ A  +F+     ++
Sbjct: 429 LGACSELADVAEGGKILSCVTDSGLELDHVLGTAVVDMYGKCGNLRRAREIFDGMKKKDV 488

Query: 538 CTWNCMISAFSQ---NKAEVR-ALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
             W+ + +A+S    +++++  AL++F  ++ E   P  ++ + +LSAC   G++  G
Sbjct: 489 VVWSALAAAYSHRGNDRSQLHTALKVFHWMQQEGVHPGSVAFLGVLSACRNAGLVDQG 546



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       +T+L++AY    +   +  +F     ++VV+WN+MI+A   +    + L  
Sbjct: 350 RGLGTDAVVATALMSAYGKCGHAGEAHRIFDGIEPRNVVSWNSMISAYAHSHRHELALDL 409

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           +  M+ EG+     T +  + A +++ +  + G+++ C++  +G+  D  L    V+MY 
Sbjct: 410 YHRMLHEGVNPTMVTFVAALGACSELADVAEGGKILSCVT-DSGLELDHVLGTAVVDMYG 468

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
           KCG+L  +   F GM   D V W+ + +   H 
Sbjct: 469 KCGNLRRAREIFDGMKKKDVVVWSALAAAYSHR 501



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 22/189 (11%)

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS------------- 619
           V ++    Q   L  GK IH  V  L  + N  I S+LL MY  C S             
Sbjct: 15  VRLIKHYAQSKSLAEGKCIHHQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFSRMDL 74

Query: 620 --NAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQ 676
               +W++ I+A+   G   EA+++F  M   G + P   +++++L+      L  + L 
Sbjct: 75  TEPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLA 134

Query: 677 YYNNMLEEYDVRPETEHHVCIVDML----GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
                +    V  + E   C+   L    GR G L EA    ++L  + +   W  M+SA
Sbjct: 135 IARE-IHTTIVAKKKEMDACVATSLMGLYGRFGCLPEAESIFQSLGFKDRVS-WSVMISA 192

Query: 733 CSHHGDTKM 741
            +H+G   +
Sbjct: 193 YAHNGRKDL 201


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 179/606 (29%), Positives = 284/606 (46%), Gaps = 106/606 (17%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D +    L+  C  S    + R +H   I+     ++ + N L+D Y K      A  +F
Sbjct: 18  DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77

Query: 337 NAIA------------------------------PMNDLVSWNSMISGL-----FKEML- 360
           + +                               P  D  SWN+M+SG      F+E L 
Sbjct: 78  DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137

Query: 361 ---------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
                    ++ +++SF + L+   +C     L  G  IH    K  +  +    +AL+ 
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALS---ACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVD 194

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A      ++  +  S WN +I    QNG   +A++ F  M       PD 
Sbjct: 195 MYSKCGVVACAQRAFDGMAVRNIVS-WNSLITCYEQNGPAGKALEVF-VMMMDNGVEPDE 252

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVF- 529
           +TL +V+SAC +     EG  +H   +K      D  + NAL+ MY +CR +  A  VF 
Sbjct: 253 ITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 530 ---------ESCYNC---------------------NLCTWNCMISAFSQNKAEVRALEL 559
                    E+   C                     N+ +WN +I+ ++QN     A+ L
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF------QENSFISSAL 610
           F  L+ E   P   +  ++L+AC  L  L+ G+Q H  +   GF      + + F+ ++L
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSL 432

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C               +   +W++MI  Y  +G G  A+E+F +M  SG +P  
Sbjct: 433 IDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            ++I +LSACSH+GLV+EG +Y+++M  E  + P  +H  C+VD+LGR+G L EA + I+
Sbjct: 493 VTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQ 552

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +P+QP   VWG++L+AC  HG+ ++GK VAE L +++P N G Y+ LSNMY  LGRWKD
Sbjct: 553 TMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKD 612

Query: 776 AVEIGK 781
            V + K
Sbjct: 613 VVRVRK 618



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 265/622 (42%), Gaps = 126/622 (20%)

Query: 56  MGLH-FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVF 114
           MG H F  ++V E    DS+    ++ +  +       R +H   IK    ++  + N  
Sbjct: 1   MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRL 60

Query: 115 VNMYAKCG-------------------------------DLNSSECTFSGMHCADTVSWN 143
           V+ Y KCG                                L+ +   F  M   D  SWN
Sbjct: 61  VDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWN 120

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
            ++SG   ++  E+ L +F +M       +  S  SA++A A L +L+ G  IHAL  K 
Sbjct: 121 AMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS 180

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
            Y    Y+   ++L+ MYS+CG +  A+RAF GM  +++VSWN++I  +  NG   +A +
Sbjct: 181 RYLLDVYMG--SALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDF 322
           +   M +   VEPD  T+ +++S CA    +REG  +H   ++R     DL++ N+L+D 
Sbjct: 239 VF-VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDM 297

Query: 323 YSKSNSLSKAELLFNAIAPMN------------------------------DLVSWNSMI 352
           Y+K   +++A L+F+ +   N                              ++VSWN++I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357

Query: 353 SG---------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           +G               L K      + ++F  LL    +C +   L+ G+  H   LK 
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN---ACANLADLKLGRQAHTQILKH 414

Query: 398 GF-------SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           GF       S+  +G N+L+ MY+ CG +     + +R+    D   WN +IV   QNG+
Sbjct: 415 GFWFQSGEESDIFVG-NSLIDMYMKCGMVEDGCLVFERMVER-DVVSWNAMIVGYAQNGY 472

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS-LHGLALKSLMGLDTRVQ 509
              A++ F+ M       PD VT++ V+SAC +  L  EG+   H +          R +
Sbjct: 473 GTNALEIFRKML-VSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSM----------RTE 521

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
             L  M                        + CM+    +      A +L + +  +P+ 
Sbjct: 522 LGLAPMKDH---------------------FTCMVDLLGRAGCLDEANDLIQTMPMQPDN 560

Query: 570 ISIVSILSACTQLGVLRHGKQI 591
           +   S+L+AC   G +  GK +
Sbjct: 561 VVWGSLLAACKVHGNIELGKYV 582



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 219/492 (44%), Gaps = 55/492 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++L+  +     + +  +F      D  +WNAM++   ++      L FF +M  E    
Sbjct: 90  AVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVL 149

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  +    +SA   +  L  G  +H L  K+  + D  + +  V+MY+KCG +  ++  F
Sbjct: 150 NEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAF 209

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
            GM   + VSWN++++ C   N P  K L  F  M  +G + D ++L+S V+A A    +
Sbjct: 210 DGMAVRNIVSWNSLIT-CYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAI 268

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC-------------------------- 224
             G  IHA  +K     +  V + N+L+ MY++C                          
Sbjct: 269 REGLQIHARVVKRDKYRNDLV-LGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVC 327

Query: 225 -----GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
                  ++AA   F  M  K+VVSWNA+I G+  NG+ EEA  L   ++   S+ P   
Sbjct: 328 GYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLK-RESIWPTHY 386

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLSKAE 333
           T   L++ CA+   L+ GR  H   ++    +      D+ + NSL+D Y K   +    
Sbjct: 387 TFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGC 446

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
           L+F  +    D+VSWN+MI G            +F++ML    +    T++ +L +C+  
Sbjct: 447 LVFERMVE-RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHA 505

Query: 382 ESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +E G+   H  + +LG +        ++ +    G L  A  L+Q +    D   W  
Sbjct: 506 GLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGS 565

Query: 441 VIVACTQNGHFQ 452
           ++ AC  +G+ +
Sbjct: 566 LLAACKVHGNIE 577



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 179/395 (45%), Gaps = 50/395 (12%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +L  +   ++L+  YS       +   F     +++V+WN++IT   +N      L  F 
Sbjct: 182 YLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFV 241

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKC 121
            M++ G+  D  TL  +VSA    + +++G  +H   +K      D  L N  V+MYAKC
Sbjct: 242 MMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKC 301

Query: 122 GDLN-------------------------------SSECTFSGMHCADTVSWNTIMSGCL 150
             +N                               ++   FS M   + VSWN +++G  
Sbjct: 302 RRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYT 361

Query: 151 HNNYPEKCLLYF----REMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY- 205
            N   E+ +  F    RE  W      + +  + + A A L +L  G+  H   +K G+ 
Sbjct: 362 QNGENEEAVRLFLLLKRESIWP----THYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417

Query: 206 ----EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
               E+S  + V NSLI MY +CG +E     F  M  +DVVSWNA+I G+A NG    A
Sbjct: 418 FQSGEESD-IFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNA 476

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM--MNSL 319
            ++  +M L+   +PD  T++ ++S C+ + L+ EGR  + +++R  LG   +      +
Sbjct: 477 LEIFRKM-LVSGQKPDHVTMIGVLSACSHAGLVEEGRR-YFHSMRTELGLAPMKDHFTCM 534

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           +D   ++  L +A  L   +    D V W S+++ 
Sbjct: 535 VDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAA 569



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 10/267 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R  L ++ + TS++  Y+  +  +++  +F     K+VV+WNA+I    +N      +  
Sbjct: 313 RMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRL 372

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK------AGMIADSSLCNVF 114
           F  +  E I     T   +++A   +  LK GR  H   +K      +G  +D  + N  
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSL 432

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           ++MY KCG +      F  M   D VSWN ++ G   N Y    L  FR+M  SG++ D+
Sbjct: 433 IDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492

Query: 175 VSLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           V++   ++A +  G +  G +  H++  +LG   +P       ++ +  + G ++ A   
Sbjct: 493 VTMIGVLSACSHAGLVEEGRRYFHSMRTELGL--APMKDHFTCMVDLLGRAGCLDEANDL 550

Query: 234 FWGMTCK-DVVSWNAIIDGFALNGKFE 259
              M  + D V W +++    ++G  E
Sbjct: 551 IQTMPMQPDNVVWGSLLAACKVHGNIE 577


>gi|302792156|ref|XP_002977844.1| hypothetical protein SELMODRAFT_50936 [Selaginella moellendorffii]
 gi|300154547|gb|EFJ21182.1| hypothetical protein SELMODRAFT_50936 [Selaginella moellendorffii]
          Length = 694

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 195/710 (27%), Positives = 328/710 (46%), Gaps = 71/710 (10%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  + +Y K GD++S+   F        VSW  +++      +  +    FREM   G  
Sbjct: 1   NQLLQIYVKMGDVDSAARIFPSPAAWSVVSWTCLVAAFARYGHFSRANALFREMLLHGAT 60

Query: 172 ADNVSLSSAVAASACLGELSYGKV----IHALGIKLGYEDSPYVSVTNSLISMYSQCGDI 227
            D ++L + +       +L + +     IH  G+      S  + + N+LI+ YS+C  +
Sbjct: 61  PDKIALLAVIQLLQHPRDLEFARTLQGWIHEAGL------STDLVLGNALIAGYSRCQSL 114

Query: 228 EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
             A RAF  +  KD +SWN+II     +     A  + H MQ   S  PD  T++ +I+ 
Sbjct: 115 IDATRAFHRIARKDTISWNSIIAAHVSSHLLPAATTIFHTMQHESSSRPDAGTLMAIIAT 174

Query: 288 ---------CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNA 338
                    CA+ L L  G  +H  A R   G +  +   L+  Y+    L  A  +F+ 
Sbjct: 175 VSIAAALTACANLLDLESGVEIHALAARS--GVEADVGGLLIHMYAACGDLDAANRVFDV 232

Query: 339 I---APMN-DLVSWNSMISG-----LFKEMLYLCSQ-------FSFSTLLAILPSCNSP- 381
               A +N DL SWNSMI+      L++E L L  Q       F   + +  L +C +  
Sbjct: 233 AMGGASINRDLSSWNSMITAYTDRNLWEEALSLVHQMHHQGMAFDDISFVTALNACAAAG 292

Query: 382 -ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV---AAFSLLQRISHNSDTSC 437
              +  G S+H    + G   + I   AL++MY  C DL    A F  L+R     D   
Sbjct: 293 YRGIPHGTSVHLCVAEAGREEDVIIRTALLNMYGKCRDLCRADAVFDALRRSGQRLDLIA 352

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLH 494
           WN +  A  Q+  F+  +  +  M  +   +PD ++ VN ++A    G   LA    ++H
Sbjct: 353 WNAMGSALAQHEEFERVLTLYGEMLLE-GVTPDEISFVNALTAAATAGRETLA----AVH 407

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKA 552
              ++  M  D  V   L+  YG   ++  A   F +   Y  ++  WN MI A      
Sbjct: 408 SHVVQRGMNRDVVVATVLVAAYGSAAEVSRAEEAFAAVPPYRRDVVLWNAMIDAHGGTPP 467

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
              AL  +  ++  P+++++V  L+AC  +  L  G++IH     LGF  +  + +AL+ 
Sbjct: 468 ---ALRTYDSMDIAPDKLTLVLALNACAGMAELTAGERIHRRATDLGFDRDVGVITALIH 524

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY++C                +   W++++S +   G+   AI LF  M  SG R     
Sbjct: 525 MYASCGRLEQSQKIFHGAQEHTMFMWNALVSGFARRGQSERAIALFERMQQSGHRADAIG 584

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+LSACS +GL+  G  Y+ ++L ++ + P  EH+ C++D+ GR+G+L+EA E+++ +
Sbjct: 585 FVSILSACSQAGLIGRGCGYFASLLHDHGILPYREHYACMIDLFGRAGRLEEAEEWLRKM 644

Query: 718 PIQP-KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           P       VW  +L ACS H D K G++ AE LF+++      Y+ ++ +
Sbjct: 645 PAHKLSKSVWETLLGACSIHSDVKRGRRAAEELFEMQSRKSSPYVIMAKL 694



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 179/713 (25%), Positives = 306/713 (42%), Gaps = 78/713 (10%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           LL  Y  +   +S+  +F       VV+W  ++ A             F EM+  G   D
Sbjct: 3   LLQIYVKMGDVDSAARIFPSPAAWSVVSWTCLVAAFARYGHFSRANALFREMLLHGATPD 62

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
              LL ++  L     L+  R +     +AG+  D  L N  +  Y++C  L  +   F 
Sbjct: 63  KIALLAVIQLLQHPRDLEFARTLQGWIHEAGLSTDLVLGNALIAGYSRCQSLIDATRAFH 122

Query: 133 GMHCADTVSWNTIMSGCLHNN-YPEKCLLYFREMGWSGEQAD---------NVSLSSAVA 182
            +   DT+SWN+I++  + ++  P    ++      S  + D          VS+++A+ 
Sbjct: 123 RIARKDTISWNSIIAAHVSSHLLPAATTIFHTMQHESSSRPDAGTLMAIIATVSIAAALT 182

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-----WGM 237
           A A L +L  G  IHAL  + G E      V   LI MY+ CGD++AA R F        
Sbjct: 183 ACANLLDLESGVEIHALAARSGVE----ADVGGLLIHMYAACGDLDAANRVFDVAMGGAS 238

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LR 295
             +D+ SWN++I  +     +EEA  L+H+M        DI + VT ++ CA +    + 
Sbjct: 239 INRDLSSWNSMITAYTDRNLWEEALSLVHQMHHQGMAFDDI-SFVTALNACAAAGYRGIP 297

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN---DLVSWNSMI 352
            G SVH          D+++  +L++ Y K   L +A+ +F+A+       DL++WN+M 
Sbjct: 298 HGTSVHLCVAEAGREEDVIIRTALLNMYGKCRDLCRADAVFDALRRSGQRLDLIAWNAMG 357

Query: 353 SGL-----FKEMLYLCSQFSFSTLLAILP---------SCNSPESLEFGKSIHCWQLKLG 398
           S L     F+ +L L  +     L  + P         +  +    E   ++H   ++ G
Sbjct: 358 SALAQHEEFERVLTLYGEM---LLEGVTPDEISFVNALTAAATAGRETLAAVHSHVVQRG 414

Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRI-SHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            + + +    L+  Y +  ++  A      +  +  D   WN +I A   +G    A++T
Sbjct: 415 MNRDVVVATVLVAAYGSAAEVSRAEEAFAAVPPYRRDVVLWNAMIDA---HGGTPPALRT 471

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           + SM    + +PD +TLV  ++AC  +     G+ +H  A       D  V  ALI MY 
Sbjct: 472 YDSM----DIAPDKLTLVLALNACAGMAELTAGERIHRRATDLGFDRDVGVITALIHMYA 527

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVS 574
            C  ++ +  +F       +  WN ++S F++     RA+ LF  ++      + I  VS
Sbjct: 528 SCGRLEQSQKIFHGAQEHTMFMWNALVSGFARRGQSERAIALFERMQQSGHRADAIGFVS 587

Query: 575 ILSACTQLGVLRHGKQIHGHVFH----LGFQENSFISSALLDMYSNCKSNAAWSSMISAY 630
           ILSAC+Q G++  G      + H    L ++E+                   ++ MI  +
Sbjct: 588 ILSACSQAGLIGRGCGYFASLLHDHGILPYREH-------------------YACMIDLF 628

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           G  G+  EA E   +M    +  +KS   +LL ACS    V  G +    + E
Sbjct: 629 GRAGRLEEAEEWLRKMPAHKL--SKSVWETLLGACSIHSDVKRGRRAAEELFE 679



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 262/585 (44%), Gaps = 53/585 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    L    +L+  YS       +   F+    KD ++WN++I A V +  +      F
Sbjct: 93  GLSTDLVLGNALIAGYSRCQSLIDATRAFHRIARKDTISWNSIIAAHVSSHLLPAATTIF 152

Query: 62  GEMVEE-GIRFDSTTLLIIV------SALT---QMNCLKQGRVVHCLSIKAGMIADSSLC 111
             M  E   R D+ TL+ I+      +ALT    +  L+ G  +H L+ ++G+ AD  + 
Sbjct: 153 HTMQHESSSRPDAGTLMAIIATVSIAAALTACANLLDLESGVEIHALAARSGVEAD--VG 210

Query: 112 NVFVNMYAKCGDLNSSECTFS-GMHCA----DTVSWNTIMSGCLHNNYPEKCLLYFREMG 166
            + ++MYA CGDL+++   F   M  A    D  SWN++++     N  E+ L    +M 
Sbjct: 211 GLLIHMYAACGDLDAANRVFDVAMGGASINRDLSSWNSMITAYTDRNLWEEALSLVHQMH 270

Query: 167 WSGEQADNVSLSSAVAASACLG--ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
             G   D++S  +A+ A A  G   + +G  +H    + G E+   V +  +L++MY +C
Sbjct: 271 HQGMAFDDISFVTALNACAAAGYRGIPHGTSVHLCVAEAGREED--VIIRTALLNMYGKC 328

Query: 225 GDIEAAERAFWGMTCK----DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
            D+  A+  F  +       D+++WNA+    A + +FE    L  EM L+  V PD  +
Sbjct: 329 RDLCRADAVFDALRRSGQRLDLIAWNAMGSALAQHEEFERVLTLYGEM-LLEGVTPDEIS 387

Query: 281 VVTLISLCADSLLLREGR----SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
            V  ++  A +     GR    +VH + ++R +  D+++   L+  Y  +  +S+AE  F
Sbjct: 388 FVNALTAAATA-----GRETLAAVHSHVVQRGMNRDVVVATVLVAAYGSAAEVSRAEEAF 442

Query: 337 NAIAP-MNDLVSWNSMIS--GLFKEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKS 389
            A+ P   D+V WN+MI   G     L        +    TL+  L +C     L  G+ 
Sbjct: 443 AAVPPYRRDVVLWNAMIDAHGGTPPALRTYDSMDIAPDKLTLVLALNACAGMAELTAGER 502

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC---WNIVIVACT 446
           IH     LGF  +   + AL+HMY +CG L  +    Q+I H +       WN ++    
Sbjct: 503 IHRRATDLGFDRDVGVITALIHMYASCGRLEQS----QKIFHGAQEHTMFMWNALVSGFA 558

Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
           + G  + AI  F+ M QQ     D++  V+++SAC    L   G       L     L  
Sbjct: 559 RRGQSERAIALFERM-QQSGHRADAIGFVSILSACSQAGLIGRGCGYFASLLHDHGILPY 617

Query: 507 RVQNA-LITMYGRCRDIKSASTVFES--CYNCNLCTWNCMISAFS 548
           R   A +I ++GR   ++ A         +  +   W  ++ A S
Sbjct: 618 REHYACMIDLFGRAGRLEEAEEWLRKMPAHKLSKSVWETLLGACS 662



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 22/249 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
            +DVV WNAMI A   +      L  +  M    I  D  TL++ ++A   M  L  G  
Sbjct: 449 RRDVVLWNAMIDA---HGGTPPALRTYDSM---DIAPDKLTLVLALNACAGMAELTAGER 502

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H  +   G   D  +    ++MYA CG L  S+  F G        WN ++SG      
Sbjct: 503 IHRRATDLGFDRDVGVITALIHMYASCGRLEQSQKIFHGAQEHTMFMWNALVSGFARRGQ 562

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG-----KVIHALGIKLGYEDSP 209
            E+ +  F  M  SG +AD +   S ++A +  G +  G      ++H  GI       P
Sbjct: 563 SERAIALFERMQQSGHRADAIGFVSILSACSQAGLIGRGCGYFASLLHDHGIL------P 616

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS--WNAIIDGFALNG---KFEEAFDL 264
           Y      +I ++ + G +E AE     M    +    W  ++   +++    +   A + 
Sbjct: 617 YREHYACMIDLFGRAGRLEEAEEWLRKMPAHKLSKSVWETLLGACSIHSDVKRGRRAAEE 676

Query: 265 LHEMQLMRS 273
           L EMQ  +S
Sbjct: 677 LFEMQSRKS 685


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 182/618 (29%), Positives = 295/618 (47%), Gaps = 105/618 (16%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N  IS Y + G  E+A   F GM  +  V++NA+I G+  N KF+ A  +  +M      
Sbjct: 64  NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------ 117

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD                                  DL+  N ++  Y K+ +LS A  
Sbjct: 118 -PD---------------------------------RDLISWNVMLSGYVKNGNLSAARA 143

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLL-AILPSCNSP 381
           LFN + P  D+VSWN+M+SG            +F +ML + ++ S++ LL A + +    
Sbjct: 144 LFNQM-PEKDVVSWNAMLSGFAQNGFVEEARKIFDQML-VKNEISWNGLLSAYVQNGRIE 201

Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
           ++     S   W++        +  N LM  Y+    L  A SL  R+    D   WNI+
Sbjct: 202 DARRLFDSKMDWEI--------VSWNCLMGGYVRKKRLDDARSLFDRMPVR-DKISWNIM 252

Query: 442 IVACTQNGHFQEAIKTFKSMTQQ-------------QNASPDSVTLV-------NVISAC 481
           I    QNG   EA + F+ +  +             QN   D  T +       N +S  
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312

Query: 482 GNLELAFEGKSLHGLA--LKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
             +    + + +         +   +T   N ++T Y +C +I  A  +F+     +  +
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372

Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVF 596
           W  MIS ++Q+     AL LF  ++ +    N  ++   LS+C ++  L  GKQ+HG + 
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
             GFQ      +ALL MY  C               K   +W++MI+ Y  HG G EA+ 
Sbjct: 433 KAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALA 492

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           LF  M  + I+P   +++ +LSACSH+G VD+G++Y+N+M + Y +    +H+ C++D+L
Sbjct: 493 LFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLL 551

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
           GR+G+L EA   +K++P  P    WGA+L A   HGDT++G++ AE +F++EP+N G Y+
Sbjct: 552 GRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYV 611

Query: 762 SLSNMYVALGRWKDAVEI 779
            LSN+Y A GRW++  E+
Sbjct: 612 LLSNLYAASGRWREVREM 629



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 259/618 (41%), Gaps = 93/618 (15%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDST-TLLIIVSALTQMNCLKQGR 93
           + D+V WN  I+A +        L  F      G+R  ST T   ++S     N     R
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFN-----GMRRRSTVTYNAMISGYLSNNKFDCAR 111

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            V        +I+     NV ++ Y K G+L+++   F+ M   D VSWN ++SG   N 
Sbjct: 112 KVFEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167

Query: 154 YPEKCLLYFREM------GWSG-----------EQADNV---SLSSAVAASACL--GELS 191
           + E+    F +M       W+G           E A  +    +   + +  CL  G + 
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227

Query: 192 YGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             ++  A  +   ++  P       N +I+ Y+Q G +  A R F  +  +DV +W A++
Sbjct: 228 KKRLDDARSL---FDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMV 284

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            GF  NG  +EA  +  EM      E +  +   +I+    S  + + R +      R  
Sbjct: 285 SGFVQNGMLDEATRIFEEMP-----EKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-- 337

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             +    N+++  Y++  ++ +A++LF+ + P  D +SW +MISG            LF 
Sbjct: 338 --NTSSWNTMVTGYAQCGNIDQAKILFDEM-PQRDCISWAAMISGYAQSGQSEEALHLFI 394

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M       + S L   L SC    +LE GK +H   +K GF    I  NAL+ MY  CG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  AF + + I+   D   WN +I    ++G  +EA+  F+SM  +    PD VTLV V
Sbjct: 455 SIEEAFDVFEDITEK-DIVSWNTMIAGYARHGFGKEALALFESM--KMTIKPDDVTLVGV 511

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           +SAC          S  G   K +   ++  QN  IT                     N 
Sbjct: 512 LSAC----------SHTGFVDKGMEYFNSMYQNYGIT--------------------ANA 541

Query: 538 CTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
             + CMI    +      AL L + + F P+  +  ++L A    G    G++    VF 
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFE 601

Query: 598 LGFQENSFISSALLDMYS 615
           +   +NS +   L ++Y+
Sbjct: 602 ME-PDNSGMYVLLSNLYA 618



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 233/528 (44%), Gaps = 72/528 (13%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-------- 64
           +L+ Y       ++ ALF +   KDVV+WNAM++   +N  V      F +M        
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISW 187

Query: 65  ------------VEEGIR-FDSTTLLIIVSALTQMNCL-----KQGRVVHCLSIKAGM-I 105
                       +E+  R FDS     IVS     NCL     ++ R+    S+   M +
Sbjct: 188 NGLLSAYVQNGRIEDARRLFDSKMDWEIVS----WNCLMGGYVRKKRLDDARSLFDRMPV 243

Query: 106 ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM 165
            D    N+ +  YA+ G L+ +   F  +   D  +W  ++SG + N   ++    F EM
Sbjct: 244 RDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 166 GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQ 223
                + + VS ++ +A      ++   + +        ++  P  + +  N++++ Y+Q
Sbjct: 304 ----PEKNEVSWNAMIAGYVQSQQIEKAREL--------FDQMPSRNTSSWNTMVTGYAQ 351

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
           CG+I+ A+  F  M  +D +SW A+I G+A +G+ EEA  L  +M+    +  + + +  
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALAC 410

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
            +S CA+   L  G+ +HG  ++       +  N+L+  Y K  S+ +A  +F  I    
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-K 469

Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFS------TLLAILPSCNS----PESLEFGK 388
           D+VSWN+MI+     G  KE L L      +      TL+ +L +C+      + +E+  
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFN 529

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           S++      G + N      ++ +    G L  A +L++ +    D + W  ++ A   +
Sbjct: 530 SMY---QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 449 GHFQEAIKTFKSMTQQQNASPDS----VTLVNVISACGNLELAFEGKS 492
           G  +   K  + + + +   PD+    V L N+ +A G      E +S
Sbjct: 587 GDTELGEKAAEKVFEME---PDNSGMYVLLSNLYAASGRWREVREMRS 631



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 144/325 (44%), Gaps = 22/325 (6%)

Query: 1   RGFLAHLPTSTS-----LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV 55
           R     +P+  +     ++T Y+     + +  LF E   +D ++W AMI+   ++    
Sbjct: 328 RELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSE 387

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
             LH F +M  +G   + + L   +S+  ++  L+ G+ +H   +KAG        N  +
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
            MY KCG +  +   F  +   D VSWNT+++G   + + ++ L  F  M  +  + D+V
Sbjct: 448 AMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDV 506

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           +L   ++A +  G +  G + +   +   Y  +        +I +  + G ++ A     
Sbjct: 507 TLVGVLSACSHTGFVDKG-MEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565

Query: 236 GMTC-KDVVSWNAIIDGFALNGKF---EEAFDLLHEMQLMRSVEPDIATVVTLIS-LCAD 290
            M    D  +W A++    ++G     E+A + + EM      EPD + +  L+S L A 
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM------EPDNSGMYVLLSNLYAA 619

Query: 291 SLLLREGRSVHG----YAIRRLLGY 311
           S   RE R +        ++++ GY
Sbjct: 620 SGRWREVREMRSKMRDKGVKKVPGY 644



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 141/339 (41%), Gaps = 43/339 (12%)

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA-CGNLELAFEG 490
           +SD   WN  I A  + G  + A+  F  M ++      +VT   +IS    N +     
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRS-----TVTYNAMISGYLSNNKFDCAR 111

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           K    +  + L+       N +++ Y +  ++ +A  +F      ++ +WN M+S F+QN
Sbjct: 112 KVFEKMPDRDLISW-----NVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 551 KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL----------GF 600
                A ++F  +    NEIS   +LSA  Q G +   +++                 G+
Sbjct: 167 GFVEEARKIFDQM-LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGY 225

Query: 601 QENSFISSA--LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS-- 656
                +  A  L D     +   +W+ MI+ Y  +G   EA  LF E+      P +   
Sbjct: 226 VRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVF 278

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +  +++S    +G++DE  + +  M E    + E   +  I   + +S ++++A E    
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPE----KNEVSWNAMIAGYV-QSQQIEKARELFDQ 333

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
           +P +     W  M++  +  G+       A++LF   P+
Sbjct: 334 MPSR-NTSSWNTMVTGYAQCGNIDQ----AKILFDEMPQ 367


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/526 (32%), Positives = 266/526 (50%), Gaps = 51/526 (9%)

Query: 297 GRSVHGYAIRRLLGYDL----LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           GR+VH + +R    +D      + N L++ YSK +  + A+L+ +   P   +V+W S+I
Sbjct: 26  GRAVHAHILRT---HDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNP-RTVVTWTSLI 81

Query: 353 SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF---------------GKSIHCWQLKL 397
           SG      +  +   FS +      C  P    F               GK +H   LK 
Sbjct: 82  SGCVHNRRFTSALLHFSNMRR---ECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKG 138

Query: 398 G-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           G   +  +G +A   MY   G    A ++   + H  + + WN  +    Q+G   +AI 
Sbjct: 139 GNILDVFVGCSAF-DMYSKTGLRPEARNMFDEMPHR-NLATWNAYMSNAVQDGRCLDAIA 196

Query: 457 TFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY 516
            FK      +  P+++T    ++AC ++     G+ LHG  ++S    D  V N LI  Y
Sbjct: 197 AFKKFLCV-DGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFY 255

Query: 517 GRCRDIKSASTVFESCYNC--NLCTWNCMISAFSQNKAEVRALELFRHL--EFEPNEISI 572
           G+C DI S+  VF    +   N+ +W  +++A  QN  E RA  +F     E EP +  I
Sbjct: 256 GKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMI 315

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
            S+LSAC +LG L  G+ +H        +EN F+ SAL+D+Y  C               
Sbjct: 316 SSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPE 375

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS--GIRPTKSSVISLLSACSHSGLVDEGL 675
           ++   W++MI  Y + G    A+ LF EM +   GI  +  +++S+LSACS +G V+ GL
Sbjct: 376 RNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGL 435

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           Q + +M   Y + P  EH+ C+VD+LGRSG +  AYEFIK +PI P   VWGA+L AC  
Sbjct: 436 QIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKM 495

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           HG TK+GK  AE LF+L+P++ G ++  SNM  + GRW++A  + K
Sbjct: 496 HGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRK 541



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 236/511 (46%), Gaps = 26/511 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS +    S+  +   T  + VVTW ++I+ CV NR     L  F  M  E +  +
Sbjct: 49  LVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPN 108

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTF 131
             T   +  A   ++    G+ +H L++K G I D  + C+ F +MY+K G    +   F
Sbjct: 109 DFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAF-DMYSKTGLRPEARNMF 167

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   +  +WN  MS  + +      +  F++      + + ++  + + A A +  L 
Sbjct: 168 DEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLE 227

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF--WGMTCKDVVSWNAII 249
            G+ +H   ++  Y +   VSV N LI  Y +CGDI ++E  F   G   ++VVSW +++
Sbjct: 228 LGRQLHGFIVRSRYRED--VSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLL 285

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
                N + E A  +   +Q  + VEP    + +++S CA+   L  GRSVH  A++  +
Sbjct: 286 AALVQNHEEERACMVF--LQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACV 343

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             ++ + ++L+D Y K  S+  AE +F  + P  +LV+WN+MI G            LF+
Sbjct: 344 EENIFVGSALVDLYGKCGSIEYAEQVFREM-PERNLVTWNAMIGGYAHLGDVDMALSLFQ 402

Query: 358 EMLY-LCS-QFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYI 414
           EM    C    S+ TL+++L +C+   ++E G  I    + + G          ++ +  
Sbjct: 403 EMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLG 462

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVT 473
             G +  A+  ++R+      S W  ++ AC  +G  +   I   K      + S + V 
Sbjct: 463 RSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVV 522

Query: 474 LVNVISACGNLELA-FEGKSLHGLALKSLMG 503
             N++++ G  E A    K +  + +K  +G
Sbjct: 523 FSNMLASAGRWEEATIVRKEMRDIGIKKNVG 553



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 188/404 (46%), Gaps = 18/404 (4%)

Query: 92  GRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           GR VH   ++       S LCN  VNMY+K    NS++   S  +    V+W +++SGC+
Sbjct: 26  GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
           HN      LL+F  M       ++ +      ASA L     GK +HAL +K G     +
Sbjct: 86  HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V    S   MYS+ G    A   F  M  +++ +WNA +     +G+  +A     +  L
Sbjct: 146 VGC--SAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKF-L 202

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
               EP+  T    ++ CAD + L  GR +HG+ +R     D+ + N L+DFY K   + 
Sbjct: 203 CVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIV 262

Query: 331 KAELLFNAIAP-MNDLVSWNSMISGLFKE-------MLYLCSQFSFST----LLAILPSC 378
            +EL+F+ I     ++VSW S+++ L +        M++L ++         + ++L +C
Sbjct: 263 SSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSAC 322

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
                LE G+S+H   LK     N    +AL+ +Y  CG +  A  + + +   +  + W
Sbjct: 323 AELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVT-W 381

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVISAC 481
           N +I      G    A+  F+ MT      +   VTLV+V+SAC
Sbjct: 382 NAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 151/290 (52%), Gaps = 8/290 (2%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIR 70
           S    YS       +  +F E  ++++ TWNA ++  V++ RC+     F   +  +G  
Sbjct: 149 SAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDG-E 207

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ T    ++A   +  L+ GR +H   +++    D S+ N  ++ Y KCGD+ SSE  
Sbjct: 208 PNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELV 267

Query: 131 FS--GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           FS  G    + VSW ++++  + N+  E+  + F +     E  D + +SS ++A A LG
Sbjct: 268 FSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFM-ISSVLSACAELG 326

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  G+ +HAL +K   E++ +V   ++L+ +Y +CG IE AE+ F  M  +++V+WNA+
Sbjct: 327 GLELGRSVHALALKACVEENIFVG--SALVDLYGKCGSIEYAEQVFREMPERNLVTWNAM 384

Query: 249 IDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREG 297
           I G+A  G  + A  L  EM      +     T+V+++S C+ +  +  G
Sbjct: 385 IGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERG 434



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 4/143 (2%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE--G 68
           ++L+  Y      E +  +F E   +++VTWNAMI        V M L  F EM     G
Sbjct: 351 SALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCG 410

Query: 69  IRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           I     TL+ ++SA ++   +++G ++   +  + G+   +      V++  + G ++ +
Sbjct: 411 IALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRA 470

Query: 128 ECTFSGMHCADTVS-WNTIMSGC 149
                 M    T+S W  ++  C
Sbjct: 471 YEFIKRMPILPTISVWGALLGAC 493


>gi|302794572|ref|XP_002979050.1| hypothetical protein SELMODRAFT_152973 [Selaginella moellendorffii]
 gi|300153368|gb|EFJ20007.1| hypothetical protein SELMODRAFT_152973 [Selaginella moellendorffii]
          Length = 871

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 226/818 (27%), Positives = 380/818 (46%), Gaps = 79/818 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYE--TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           + +L++ YS     E +  +F    +  +DV+ W +M+ A  +          F +M+ E
Sbjct: 70  ANALVSMYSRCGGVEEAAKVFEAVGSGTRDVIMWTSMVAAYAQCGFSDTAFRLFQKMLLE 129

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           GIR D  + + I+ +L +     + ++VH L  +     D ++    V M+++ G L+S+
Sbjct: 130 GIRPDKISFITILGSLMR----DRAKLVHDLVCECCFDTDVAVGTALVEMFSRAGKLSSA 185

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  +      SW+ ++S  + + Y     + F+ M   G  AD ++L + + A    
Sbjct: 186 WDAFDSISHPVVASWSALISAMVEHGYYSVAFVVFQGMLLEGVTADKIALITILGACKSS 245

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWN 246
             L  GK++H      G+E    + V N+LI MY  C D++ A   F  +   +D VSWN
Sbjct: 246 SFLPAGKLVHNFISSSGFELD--LVVRNALIDMYGSCRDLKTARDIFGQLVPYEDAVSWN 303

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV-HGYAI 305
           ++I   A +G+  EA  L ++MQL + + PD    VT IS+       ++G+ + H   I
Sbjct: 304 SMIAACAESGQHNEAILLFYQMQL-QGMAPD---RVTFISVLNSFSFSKQGKGLPHLNNI 359

Query: 306 RRLLGYDLLMMN------SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF--- 356
             L+    L +N      S++  Y K  ++  A+ +F A       VSWN++++      
Sbjct: 360 HELVQAVGLHVNPELVRASIIRMYGKCGAVEDAQAVFRA--GEETFVSWNALVAAFADSG 417

Query: 357 ---KEMLYLCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
              K +  L S      Q    TL +IL +C SP+ L+FG+ +H   +  G+ + T+   
Sbjct: 418 MAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGSGWESGTVLGT 477

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
           A++ MY  CG +  AF     ++   D    N +I AC Q+  F EA+  F+ M Q +  
Sbjct: 478 AVISMYGRCGSVEDAFRAFNTVAEK-DLVAMNAIITACIQHNEFGEALNLFR-MMQLEGM 535

Query: 468 SPDSVTLVNVISAC-----GNLELA--FEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
            P   T V+V++AC      NL L+   E  SL     ++    D  + NA+ITM+GRC 
Sbjct: 536 KPSKATFVSVLNACSSPRDANLVLSCILETTSLGSHESEA----DLLLGNAVITMHGRCG 591

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILS 577
           D  +A   F S    ++ +WN ++ A ++   EV  LE+F  ++   F PN+IS VS L+
Sbjct: 592 DFVAAQQAFNSMAVRDVISWNALMVA-AEKGDEV--LEIFHRMQLEGFRPNKISFVSFLT 648

Query: 578 ACTQLGVLRHG------KQIHGHVFHLGFQENSFISSALLDMYSNC-------------- 617
           A +              K I           +  I    +++Y+                
Sbjct: 649 AASSNSSGSIISSAQSCKAIQALAVQAQVFRDDVIKHGFINLYAKVGNLNQADQVFQDIS 708

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
            +   +W+S+I+AY  +    +A+ELF EM   GI P   + +S+LSACSHSG     + 
Sbjct: 709 RRDVVSWNSIIAAYARNATAGQALELFLEMQLQGIAPDGITFVSILSACSHSGQAASAVF 768

Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-----WGAMLS 731
           Y+++M  +Y V    EH  C+VD+  RSG+L  A E  ++       G      W  +L 
Sbjct: 769 YFSSMAIDYGVPAGPEHQGCLVDLFSRSGRLSIAEELSESSSGGGGGGGGGGFQWMMVLG 828

Query: 732 ACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
            C    D + G  VAE + ++E      ++ LSN+  A
Sbjct: 829 GCQVQNDARRGVAVAERVMEIERSCGAGHVVLSNLLRA 866



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 166/647 (25%), Positives = 308/647 (47%), Gaps = 64/647 (9%)

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
           H+     CL   R M   G   +  +  +A+ +  C  +L+ G+ +H    + G +    
Sbjct: 10  HHKEAFGCL---RRMQLEGISPNEFTFVNALGSCGCGDDLARGRTLHGWISEGGMDLDSN 66

Query: 211 VSVTNSLISMYSQCGDIEAAERAF--WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             + N+L+SMYS+CG +E A + F   G   +DV+ W +++  +A  G  + AF L  +M
Sbjct: 67  SVLANALVSMYSRCGGVEEAAKVFEAVGSGTRDVIMWTSMVAAYAQCGFSDTAFRLFQKM 126

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L+  + PD  + +T++     SL+    + VH          D+ +  +L++ +S++  
Sbjct: 127 -LLEGIRPDKISFITILG----SLMRDRAKLVHDLVCECCFDTDVAVGTALVEMFSRAGK 181

Query: 329 LSKAELLFNAIA-PMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAIL 375
           LS A   F++I+ P+  + SW+++IS + +   Y  +   F              L+ IL
Sbjct: 182 LSSAWDAFDSISHPV--VASWSALISAMVEHGYYSVAFVVFQGMLLEGVTADKIALITIL 239

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C S   L  GK +H +    GF  + +  NAL+ MY +C DL  A  +  ++    D 
Sbjct: 240 GACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQLVPYEDA 299

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I AC ++G   EAI  F  M Q Q  +PD VT ++V++   +   + +GK L  
Sbjct: 300 VSWNSMIAACAESGQHNEAILLFYQM-QLQGMAPDRVTFISVLN---SFSFSKQGKGLPH 355

Query: 496 L----ALKSLMGLDTR---VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           L     L   +GL      V+ ++I MYG+C  ++ A  VF +       +WN +++AF+
Sbjct: 356 LNNIHELVQAVGLHVNPELVRASIIRMYGKCGAVEDAQAVFRAGEE-TFVSWNALVAAFA 414

Query: 549 QN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
            +   +  +R+L   +   F+ +EI++ SIL+AC     L+ G+++H  V   G++  + 
Sbjct: 415 DSGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGSGWESGTV 474

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + +A++ MY  C               K   A +++I+A   H +  EA+ LF  M   G
Sbjct: 475 LGTAVISMYGRCGSVEDAFRAFNTVAEKDLVAMNAIITACIQHNEFGEALNLFRMMQLEG 534

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQ--YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
           ++P+K++ +S+L+ACS     +  L        L  ++   +      ++ M GR G   
Sbjct: 535 MKPSKATFVSVLNACSSPRDANLVLSCILETTSLGSHESEADLLLGNAVITMHGRCGDFV 594

Query: 709 EAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
            A +   ++ ++     W A++ A       + G +V E+  +++ E
Sbjct: 595 AAQQAFNSMAVRDVIS-WNALMVA------AEKGDEVLEIFHRMQLE 634



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 159/615 (25%), Positives = 285/615 (46%), Gaps = 49/615 (7%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   +   T+L+  +S      S+   F    +  V +W+A+I+A VE+    +    F 
Sbjct: 162 FDTDVAVGTALVEMFSRAGKLSSAWDAFDSISHPVVASWSALISAMVEHGYYSVAFVVFQ 221

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
            M+ EG+  D   L+ I+ A    + L  G++VH     +G   D  + N  ++MY  C 
Sbjct: 222 GMLLEGVTADKIALITILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCR 281

Query: 123 DLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           DL ++   F  +    D VSWN++++ C  +    + +L F +M   G   D V+  S  
Sbjct: 282 DLKTARDIFGQLVPYEDAVSWNSMIAACAESGQHNEAILLFYQMQLQGMAPDRVTFISV- 340

Query: 182 AASACLGELSYGKV---------IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
                L   S+ K          IH L   +G   +P + V  S+I MY +CG +E A+ 
Sbjct: 341 -----LNSFSFSKQGKGLPHLNNIHELVQAVGLHVNPEL-VRASIIRMYGKCGAVEDAQA 394

Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
            F     +  VSWNA++  FA +G  E++   LH  QL    + D  T+ ++++ C    
Sbjct: 395 VFRAGE-ETFVSWNALVAAFADSGMAEKSLRSLHSTQL-EGFQADEITLASILNACESPQ 452

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            L+ GR VH   +        ++  +++  Y +  S+  A   FN +A   DLV+ N++I
Sbjct: 453 DLKFGRKVHKQVVGSGWESGTVLGTAVISMYGRCGSVEDAFRAFNTVAE-KDLVAMNAII 511

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
           +             LF+ M     + S +T +++L +C+SP       S       LG  
Sbjct: 512 TACIQHNEFGEALNLFRMMQLEGMKPSKATFVSVLNACSSPRDANLVLSCILETTSLGSH 571

Query: 401 NNTIGV---NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            +   +   NA++ M+  CGD VAA      ++   D   WN ++VA  +     E ++ 
Sbjct: 572 ESEADLLLGNAVITMHGRCGDFVAAQQAFNSMAVR-DVISWNALMVAAEKG---DEVLEI 627

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEG------KSLHGLALKSLMGLDTRVQNA 511
           F  M Q +   P+ ++ V+ ++A  +             K++  LA+++ +  D  +++ 
Sbjct: 628 FHRM-QLEGFRPNKISFVSFLTAASSNSSGSIISSAQSCKAIQALAVQAQVFRDDVIKHG 686

Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PN 568
            I +Y +  ++  A  VF+     ++ +WN +I+A+++N    +ALELF  ++ +   P+
Sbjct: 687 FINLYAKVGNLNQADQVFQDISRRDVVSWNSIIAAYARNATAGQALELFLEMQLQGIAPD 746

Query: 569 EISIVSILSACTQLG 583
            I+ VSILSAC+  G
Sbjct: 747 GITFVSILSACSHSG 761



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 173/650 (26%), Positives = 295/650 (45%), Gaps = 70/650 (10%)

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNC---LKQGRVVHCLSIKAGMIADSS--LCNVFVNM 117
            M  EGI  +  T    V+AL    C   L +GR +H    + GM  DS+  L N  V+M
Sbjct: 20  RMQLEGISPNEFTF---VNALGSCGCGDDLARGRTLHGWISEGGMDLDSNSVLANALVSM 76

Query: 118 YAKCGDLNSSECTFS--GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
           Y++CG +  +   F   G    D + W ++++      + +     F++M   G + D +
Sbjct: 77  YSRCGGVEEAAKVFEAVGSGTRDVIMWTSMVAAYAQCGFSDTAFRLFQKMLLEGIRPDKI 136

Query: 176 SLSSAVAASACLGEL--SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           S  +       LG L     K++H L  +  ++    V+V  +L+ M+S+ G + +A  A
Sbjct: 137 SFIT------ILGSLMRDRAKLVHDLVCECCFDTD--VAVGTALVEMFSRAGKLSSAWDA 188

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  ++   V SW+A+I     +G +  AF +   M L+  V  D   ++T++  C  S  
Sbjct: 189 FDSISHPVVASWSALISAMVEHGYYSVAFVVFQGM-LLEGVTADKIALITILGACKSSSF 247

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI- 352
           L  G+ VH +        DL++ N+L+D Y     L  A  +F  + P  D VSWNSMI 
Sbjct: 248 LPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQLVPYEDAVSWNSMIA 307

Query: 353 ----SGLFKEMLYLCSQFSFS-------TLLAILPS---CNSPESLEFGKSIHCWQLKLG 398
               SG   E + L  Q           T +++L S       + L    +IH     +G
Sbjct: 308 ACAESGQHNEAILLFYQMQLQGMAPDRVTFISVLNSFSFSKQGKGLPHLNNIHELVQAVG 367

Query: 399 FSNNTIGVNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
              N   V A ++ MY  CG +  A ++  R    +  S WN ++ A   +G  ++++++
Sbjct: 368 LHVNPELVRASIIRMYGKCGAVEDAQAVF-RAGEETFVS-WNALVAAFADSGMAEKSLRS 425

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
             S TQ +    D +TL ++++AC + +    G+ +H   + S     T +  A+I+MYG
Sbjct: 426 LHS-TQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGSGWESGTVLGTAVISMYG 484

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVS 574
           RC  ++ A   F +    +L   N +I+A  Q+     AL LFR ++ E   P++ + VS
Sbjct: 485 RCGSVEDAFRAFNTVAEKDLVAMNAIITACIQHNEFGEALNLFRMMQLEGMKPSKATFVS 544

Query: 575 ILSACTQLGVLRHGKQIHGHVFH---LGFQENS---FISSALLDMYSNCKSNAA------ 622
           +L+AC+     R    +   +     LG  E+     + +A++ M+  C    A      
Sbjct: 545 VLNACSS---PRDANLVLSCILETTSLGSHESEADLLLGNAVITMHGRCGDFVAAQQAFN 601

Query: 623 ---------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                    W++++ A     KG E +E+FH M   G RP K S +S L+
Sbjct: 602 SMAVRDVISWNALMVAA---EKGDEVLEIFHRMQLEGFRPNKISFVSFLT 648


>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
 gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 178/596 (29%), Positives = 308/596 (51%), Gaps = 40/596 (6%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           + L+S Y + GDI  A + F  +  +DVVSW+ +I G+  NG   ++ +L  +M++   V
Sbjct: 30  SKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLV 89

Query: 275 EPDIATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
                 V  L+S+    D +L   G+ VHG  ++  L  D  ++ +L++ Y+K  ++  +
Sbjct: 90  PTSFTMVGVLVSIAGLGDPVL---GQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDS 146

Query: 333 ELLFNAIAPMNDLVSWNSMISG-----LFKEMLYLCSQF-------SFSTLLAILPSCNS 380
             +F  +     LVS ++++SG     LF+E + L +QF       + +T+L ++ +C +
Sbjct: 147 YRVFEQLENPG-LVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVA 205

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            ES    +SIH   +KL    +    N+++ MY +  DL AA  + + +    D   W  
Sbjct: 206 LESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGM-ECRDVISWTT 264

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I       +  +A+  F+ M +      D V ++N+ISAC  L     G+ +H  A+  
Sbjct: 265 MINLLVCLEYASDALMLFRQM-RNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVC 323

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
             G +  + N++I MY +C D+ S+ TVF+     +L +W  MI    QN     AL+L 
Sbjct: 324 GFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKLL 383

Query: 561 RHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
             +     F  + I ++ +LSA  +L +L   +Q+H + F  GF     + ++L+  YS 
Sbjct: 384 IKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAYSK 443

Query: 617 C----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
           C                +   +W+++++ YG +G G  A+ L+HEM      P  ++ + 
Sbjct: 444 CGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRENPDAATYLC 503

Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
           +LSACSHSGLVD+GL  +N M+EE  +RP  +H  CIVD+L R+G   +A EF+     +
Sbjct: 504 VLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFSDAREFVSRYMEK 563

Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
             P  W A+LS C  HG+  + +  A  + +L+PE  G  + LSN+Y ++GR++DA
Sbjct: 564 MGPNAWRALLSGCQLHGNVGLAELAARRVCELDPEEPGQVVLLSNVYASVGRFQDA 619



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 237/495 (47%), Gaps = 22/495 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           + LL+ Y       ++  LF E   +DVV+W+ MI     N      +  F +M    + 
Sbjct: 30  SKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLV 89

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
             S T++ ++ ++  +     G+ VH L +K G+ +D  +    +N YAKCG++  S   
Sbjct: 90  PTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRV 149

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  +     VS + I+SG ++N   E+ ++ F +    G   +  ++ + + A   L   
Sbjct: 150 FEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESR 209

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
              + IH + +KL       V+V NS++ MYS   D++AA R F GM C+DV+SW  +I+
Sbjct: 210 RLCESIHGMVVKLSLVLD--VAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMIN 267

Query: 251 GFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
                   E A D L   + MR+  +  D+  V+ LIS CA    L+ GR +H  AI   
Sbjct: 268 LLVC---LEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVCG 324

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------LFKEM 359
            G +L + NS++  YSK   L  +  +F+       LVSW +MI G           K +
Sbjct: 325 FGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTG-KSLVSWTAMILGCVQNGYPREALKLL 383

Query: 360 LYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           + +  + SF      L+ +L +      LE  + +HC+  + GF    +  N+L+  Y  
Sbjct: 384 IKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAYSK 443

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           CGD+  A+++  ++ +  D   WN ++     NGH + A+  +  M + +  +PD+ T +
Sbjct: 444 CGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRE-NPDAATYL 502

Query: 476 NVISACGNLELAFEG 490
            V+SAC +  L  +G
Sbjct: 503 CVLSACSHSGLVDDG 517



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 246/540 (45%), Gaps = 42/540 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +     T+LL AY+       S  +F +  N  +V+ +A+++  V N      +  F
Sbjct: 122 GLDSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLF 181

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +  + G+  ++ T+L ++ A   +   +    +H + +K  ++ D ++ N  ++MY+  
Sbjct: 182 NQFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSM 241

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            DL+++   F GM C D +SW T+++  +   Y    L+ FR+M  +G   D V + + +
Sbjct: 242 LDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLI 301

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A LG+L  G+ IH   I  G+     + +TNS+I+MYS+CGD++++   F   T K 
Sbjct: 302 SACAILGDLKRGREIHTQAIVCGFGSE--LPLTNSIIAMYSKCGDLDSSRTVFDQTTGKS 359

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +VSW A+I G   NG   EA  LL +M+   S   D   ++ ++S   +  LL   + +H
Sbjct: 360 LVSWTAMILGCVQNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLH 419

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            YA         L+ NSL+  YSK   +  A  +F  +  + D+VSWN++++G       
Sbjct: 420 CYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHG 479

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                L+ EM         +T L +L +C+    ++ G  I          N  +    +
Sbjct: 480 EIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIF---------NQMVEERTI 530

Query: 410 MHMYINCG---DLVA-------AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
                +CG   DL+A       A   + R       + W  ++  C  +G+   A    +
Sbjct: 531 RPSQDHCGCIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAAR 590

Query: 460 SMTQQQNASPDSVTLV-NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR 518
            + +     P  V L+ NV ++ G  + A         AL++ M     ++N  I++  R
Sbjct: 591 RVCELDPEEPGQVVLLSNVYASVGRFQDAE--------ALRASMKKKELIKNPGISLLNR 642



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 179/393 (45%), Gaps = 25/393 (6%)

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
           SIH    +    ++ I  + L+  Y+  GD++ A  L + I    D   W+I+I    +N
Sbjct: 12  SIHTSTQRYPHGSDPINYSKLLSCYLKSGDIINAGKLFEEIPKR-DVVSWSIMIHGYNRN 70

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G  +++++ F  M +  +  P S T+V V+ +   L     G+ +HGL LK  +  D RV
Sbjct: 71  GFRRKSMELFSQM-RISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRV 129

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL---FRHLEF 565
             AL+  Y +C ++  +  VFE   N  L + + ++S F  N+    A+ L   FR L  
Sbjct: 130 VTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGM 189

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN--------- 616
            PN  ++++++ AC  L   R  + IHG V  L    +  +++++LDMYS+         
Sbjct: 190 VPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATR 249

Query: 617 ------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                 C+   +W++MI+         +A+ LF +M N+GI      V++L+SAC+  G 
Sbjct: 250 VFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGD 309

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           +  G + +   +       E      I+ M  + G L  +         +     W AM+
Sbjct: 310 LKRGREIHTQAI-VCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVS-WTAMI 367

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
             C  +G     ++  +LL K+  E   Y  S+
Sbjct: 368 LGCVQNG---YPREALKLLIKMRGEESFYLDSI 397


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/569 (29%), Positives = 292/569 (51%), Gaps = 34/569 (5%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V  WN+ I      G   +A  L  +M+    +EP+  T  ++   C+  L L+  + VH
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMK-QNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
            + ++     DL +  S++D Y K + L  A  LF+ + P  D+ SWNSMI G       
Sbjct: 78  THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRM-PKRDVASWNSMILGFAQLGFV 136

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF EM     +    T++ +  S  S + L+  +SIH + +K+G   +    N  
Sbjct: 137 DRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTW 196

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           +  Y  CG+   A ++   I     T   WN +I          +A+  FK M       
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCG-GFR 255

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
            D  T+++++S+C   E+ F GK +H   ++     D +V N LI+MY +C DI SA  +
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVL 585
           F++       +W  MI+ +++      A+ LF  +E    +P+ ++I+S++S C Q G L
Sbjct: 316 FDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGAL 375

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
             GK I  +    G ++N  + +AL+D+Y+ C               KS  +W+++I+  
Sbjct: 376 ELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGC 435

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
             +G+  EA+ LF +M   G++P   + +++L AC+H+G +++G + +N M + Y + P 
Sbjct: 436 ALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPG 495

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            +H+ C+ D+LGR G+L+EA+EFI+N+P +P  G+W  +LSAC  H +  +G+ VA  LF
Sbjct: 496 LDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLF 555

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +LEP+    Y+ ++N+Y + G+W     I
Sbjct: 556 ELEPQTAVPYVQMANIYASAGKWDRVAAI 584



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 248/502 (49%), Gaps = 26/502 (5%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F A L   TS++  Y   S    +  LF     +DV +WN+MI    +   V   +  F 
Sbjct: 85  FQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFC 144

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
           EM  EGIR DS T++ +  +   +  LK    +H   IK G+  D S+ N ++  YAKCG
Sbjct: 145 EMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCG 204

Query: 123 DLNSSECTFSGMH--CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           +   +E  F G+       VSWN++++G  H     K + +F++M   G +AD  ++ S 
Sbjct: 205 EFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSL 264

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +++      L +GK+IHA GI++G +    + V N+LISMYS+CGDI +A   F  M  K
Sbjct: 265 LSSCVQPEVLFHGKLIHAHGIQVGCDSD--IQVINTLISMYSKCGDIGSARYLFDNMLGK 322

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             VSW A+I G+A  G  +EA  L   M+ +   +PD+ T+++L+S C  +  L  G+ +
Sbjct: 323 TRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGE-KPDLVTIISLMSGCGQTGALELGKWI 381

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
             YA    L  +L++ N+L+D Y+K  S+  A  LF  + P   LVSW ++I+       
Sbjct: 382 DTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTM-PEKSLVSWTTLIAGCALNGE 440

Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN- 407
                GLF +M+ L  + +  T LA+L +CN    LE  K   C+ L         G++ 
Sbjct: 441 FKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLE--KGWECFNLMTKVYKINPGLDH 498

Query: 408 --ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQ 463
              +  +    G L  AF  +Q +    D   W++++ AC   QN    E +       +
Sbjct: 499 YSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELE 558

Query: 464 QQNASPDSVTLVNVISACGNLE 485
            Q A P  V + N+ ++ G  +
Sbjct: 559 PQTAVP-YVQMANIYASAGKWD 579



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 264/553 (47%), Gaps = 33/553 (5%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           V  WN+ IT  V        L  F +M + G+  ++ T   +  A +++  LK  ++VH 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
             +K+   AD  +    V+MY KC  L  +   FS M   D  SWN+++ G     + ++
Sbjct: 79  HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDR 138

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +  F EMG  G +AD+V++     ++  L +L   + IH+ GIK+G +    VSV+N+ 
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD--VSVSNTW 196

Query: 218 ISMYSQCGDIEAAERAFWGMT--CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           I+ Y++CG+   AE  F G+    K  VSWN++I G+A   +  +A     +M L     
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKM-LCGGFR 255

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D++T+++L+S C    +L  G+ +H + I+     D+ ++N+L+  YSK   +  A  L
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYL 315

Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
           F+ +      VSW +MI+G            LF  M  +  +    T+++++  C    +
Sbjct: 316 FDNMLGKTR-VSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGA 374

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           LE GK I  +    G  +N +  NAL+ +Y  CG +  A  L   +   S  S W  +I 
Sbjct: 375 LELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVS-WTTLIA 433

Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHGLALKS 500
            C  NG F+EA+  F  M  +    P+ +T + V+ AC   G LE  +E  +L     K 
Sbjct: 434 GCALNGEFKEALGLFFQMV-ELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKI 492

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA--FSQNK--AEVR 555
             GLD    + +  + GR   +K A    ++  +  ++  W+ ++SA    QN    E  
Sbjct: 493 NPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECV 550

Query: 556 ALELFRHLEFEPN 568
           A  LF   E EP 
Sbjct: 551 AYHLF---ELEPQ 560



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 149/298 (50%), Gaps = 5/298 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
           G    +  S + + AY+    F  +  +F   +   K  V+WN+MI            + 
Sbjct: 185 GIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVG 244

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           FF +M+  G R D +T+L ++S+  Q   L  G+++H   I+ G  +D  + N  ++MY+
Sbjct: 245 FFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYS 304

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCGD+ S+   F  M     VSW  +++G       ++ +  F  M   GE+ D V++ S
Sbjct: 305 KCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIIS 364

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++     G L  GK I       G +D+  + V N+LI +Y++CG ++ A   F+ M  
Sbjct: 365 LMSGCGQTGALELGKWIDTYATANGLKDN--LMVCNALIDVYAKCGSMDNARELFYTMPE 422

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           K +VSW  +I G ALNG+F+EA  L  +M +   ++P+  T + ++  C  +  L +G
Sbjct: 423 KSLVSWTTLIAGCALNGEFKEALGLFFQM-VELGLKPNHITFLAVLQACNHAGFLEKG 479


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 306/620 (49%), Gaps = 39/620 (6%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ +H L +K G+ D   V V  +L+ MY +CG +E     F GM  ++VV+W +++ G+
Sbjct: 118 GEQLHCLCVKCGF-DRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGY 176

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
                  +   L   M+    V P+  T  +++S  A    +  GR VH  +++      
Sbjct: 177 VQGRACSDVMALFFRMR-AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST 235

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           + + NSL++ YSK   + +A+ +F  +    D+VSWN++++GL            F +  
Sbjct: 236 VFVCNSLINMYSKCGLVEEAKAVFRQME-TRDMVSWNTLMAGLLLNEHQLEALQLFHDSR 294

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
              ++ S ST   ++  C + + L   + +H   LK GF ++   + A+M  Y  CG+L 
Sbjct: 295 ASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELD 354

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            AF++   +  + +   W  +I  C QN     A   F  M ++ N  P+  T   V++A
Sbjct: 355 DAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM-REDNVKPNEFTYSTVLTA 413

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
              + L      +H   +K+       V  AL+  Y +  + + A ++F+   + ++  W
Sbjct: 414 SIPILL----PQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAW 469

Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSAC-TQLGVLRHGKQIHGHVF 596
           + M+S +SQ      A  +F  +  +   PNE +I S + AC +    +  G+Q H    
Sbjct: 470 SAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISI 529

Query: 597 HLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIE 641
              +Q+   + SAL+ MY+                 +   +W+SMIS Y  HG   EA++
Sbjct: 530 KYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALD 589

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
            F +M   GI    ++ ++++  C+H+GLV EG QY+++M+ ++++ P  EH+ C+VD+ 
Sbjct: 590 TFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLY 649

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
            R+GKL E    I+ +P      VW  +L AC  H + ++GK  A+ L  LEP++   Y+
Sbjct: 650 SRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYV 709

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LSN+Y A GRWK+  E+ K
Sbjct: 710 LLSNIYAAAGRWKERDEVRK 729



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 238/501 (47%), Gaps = 24/501 (4%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A +   T+L+  Y      E    +F     ++VVTW +++T  V+ R     +  F  M
Sbjct: 133 AEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRM 192

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             EG+  +  T   ++SA+     +  GR VH  S+K G  +   +CN  +NMY+KCG +
Sbjct: 193 RAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLV 252

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
             ++  F  M   D VSWNT+M+G L N +  + L  F +   S  +    + S+ +   
Sbjct: 253 EEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLC 312

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVV 243
           A L +L+  + +H+  +K G+      +V  +++  YS+CG+++ A   F  M   ++VV
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHSDG--NVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVV 370

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW A+I G   N     A  L   M+   +V+P+  T  T+++     LL +    +H  
Sbjct: 371 SWTAMIGGCIQNADIPLAAALFSRMR-EDNVKPNEFTYSTVLTASIPILLPQ----IHAQ 425

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
            I+    +   +  +L+  YSK  +  +A  +F  I    D+V+W++M+S          
Sbjct: 426 IIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMI-DHKDVVAWSAMLSCYSQAGDCDG 484

Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALM 410
              +F +M     + +  T+ + + +C SP + ++ G+  H   +K  + +     +AL+
Sbjct: 485 ATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALV 544

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            MY   G + +A  + +R + + D   WN +I    Q+G+ +EA+ TF+ M +      D
Sbjct: 545 TMYARKGSIDSARIVFERQT-DRDLVSWNSMISGYAQHGYSKEALDTFRQM-ETVGIEMD 602

Query: 471 SVTLVNVISACGNLELAFEGK 491
             T + VI  C +  L  EG+
Sbjct: 603 GATFLAVIVGCTHAGLVKEGQ 623



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/410 (20%), Positives = 167/410 (40%), Gaps = 50/410 (12%)

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGD 418
           ++ C +   + +  +L  C        G+ +HC  +K GF    +GV  AL+ MY+ CG 
Sbjct: 91  VHRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGG 150

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           +     + + +    +   W  ++    Q     + +  F  M + +   P+  T  +V+
Sbjct: 151 VEDGRVVFEGMP-KRNVVTWTSLLTGYVQGRACSDVMALFFRM-RAEGVWPNPFTFTSVL 208

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           SA  +      G+ +H  ++K        V N+LI MY +C  ++ A  VF      ++ 
Sbjct: 209 SAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMV 268

Query: 539 TWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +WN +++    N+ ++ AL+LF   R    + ++ +  +++  C  L  L   +Q+H  V
Sbjct: 269 SWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCV 328

Query: 596 FHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEA 639
              GF  +  + +A++D YS C                ++  +W++MI     +     A
Sbjct: 329 LKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLA 388

Query: 640 IELFHEMCNSGIRPTKSSVISLLSAC-------SHSGLVDEGLQYYNN----MLEEYDVR 688
             LF  M    ++P + +  ++L+A         H+ ++    Q+  +    +L  Y   
Sbjct: 389 AALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKL 448

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
             TE  + I  M+     +                  W AMLS  S  GD
Sbjct: 449 GNTEEALSIFKMIDHKDVV-----------------AWSAMLSCYSQAGD 481


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 177/586 (30%), Positives = 292/586 (49%), Gaps = 70/586 (11%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++IS Y + G+ E A   F  M  +D+VSWN +I G+  N    +A +L   M      
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMP----- 148

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E D+ +  T++S  A +  + + R V      R+   + +  N+L+  Y +++ L +A +
Sbjct: 149 ERDVCSWNTILSGYAQNGCVDDARRV----FDRMPEKNDVSWNALLSAYVQNSKLEEACV 204

Query: 335 LFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
           LF +      LVSWN ++ G  K+   +                   E+ +F  S+    
Sbjct: 205 LFGSRENWA-LVSWNCLLGGFVKKKKIV-------------------EARQFFDSMKV-- 242

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
                  + +  N ++  Y   G++  A  L    S   D   W  ++    QN   +EA
Sbjct: 243 ------RDVVSWNTIITGYAQNGEIDEARQLFDE-SPVHDVFTWTAMVSGYIQNRMVEEA 295

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG-LDTRVQNALI 513
            + F  M ++   S +++ L   +     +E+A E        L  +M   +    N +I
Sbjct: 296 RELFDRMPERNEVSWNAM-LAGYVQG-ERVEMAKE--------LFDVMPCRNVSTWNTMI 345

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEI 570
           T Y +C  I  A  +F+     +  +W  MI+ +SQ+     AL LF  +E E    N  
Sbjct: 346 TGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRS 405

Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
           S  S LS C  +  L  GKQ+HG +   G++   F+ +ALL MY  C             
Sbjct: 406 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 465

Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
             K   +W++MI+ Y  HG G EA+  F  M   G++P  ++++++LSACSH+GLVD+G 
Sbjct: 466 AGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 525

Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
           QY++ M ++Y VRP ++H+ C+VD+LGR+G L+EA+  +KN+P +P   +WG +L A   
Sbjct: 526 QYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRV 585

Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           HG+T++ +  A+ +F +EPEN G Y+ LSN+Y + GRW D   +GK
Sbjct: 586 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD---VGK 628



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 245/559 (43%), Gaps = 58/559 (10%)

Query: 106 ADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM 165
           +D    NV ++ Y + G  + +   F  M    +VS+N ++SG L N   E   + F EM
Sbjct: 57  SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116

Query: 166 GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT--NSLISMYSQ 223
                + D VS +  +        L   + +        +E  P   V   N+++S Y+Q
Sbjct: 117 ----PERDLVSWNVMIKGYVRNRNLGKAREL--------FERMPERDVCSWNTILSGYAQ 164

Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
            G ++ A R F  M  K+ VSWNA++  +  N K EEA  L       R     ++    
Sbjct: 165 NGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGS----RENWALVSWNCL 220

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L        ++   +      +R     D++  N+++  Y+++  + +A  LF+  +P++
Sbjct: 221 LGGFVKKKKIVEARQFFDSMKVR-----DVVSWNTIITGYAQNGEIDEARQLFDE-SPVH 274

Query: 344 DLVSWNSMISGLFKEMLYLCSQFSFSTLL--------AILPSCNSPESLEFGKSIHCWQL 395
           D+ +W +M+SG  +  +   ++  F  +         A+L      E +E  K +     
Sbjct: 275 DVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKEL----F 330

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
            +    N    N ++  Y  CG +  A +L  ++    D   W  +I   +Q+GH  EA+
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSYEAL 389

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
           + F  M +++    +  +  + +S C ++     GK LHG  +K        V NAL+ M
Sbjct: 390 RLFVLM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 448

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
           Y +C  I+ A+ +F+     ++ +WN MI+ +S++     AL  F  ++ E   P++ ++
Sbjct: 449 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATM 508

Query: 573 VSILSACTQLGVLRHGKQ-IHGHVFHLGFQENS---------FISSALLDMYSNCKSN-- 620
           V++LSAC+  G++  G+Q  H      G + NS            + LL+   N   N  
Sbjct: 509 VAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMP 568

Query: 621 -----AAWSSMISAYGYHG 634
                A W +++ A   HG
Sbjct: 569 FEPDAAIWGTLLGASRVHG 587



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 24/304 (7%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++T Y+     + +  LF E+   DV TW AM++  ++NR V      F  M E     
Sbjct: 250 TIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER---- 305

Query: 72  DSTTLLIIVSALTQMNCLKQGR----VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           +  +   +++   Q   ++  +    V+ C ++        S  N  +  YA+CG ++ +
Sbjct: 306 NEVSWNAMLAGYVQGERVEMAKELFDVMPCRNV--------STWNTMITGYAQCGKISEA 357

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           +  F  M   D VSW  +++G   + +  + L  F  M   G + +  S SSA++  A +
Sbjct: 358 KNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADV 417

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L  GK +H   +K GYE   +V   N+L+ MY +CG IE A   F  M  KD+VSWN 
Sbjct: 418 VALELGKQLHGRLVKGGYETGCFVG--NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 475

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHG 302
           +I G++ +G  EEA      M+    ++PD AT+V ++S C+ + L+ +GR         
Sbjct: 476 MIAGYSRHGFGEEALRFFESMK-REGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQD 534

Query: 303 YAIR 306
           Y +R
Sbjct: 535 YGVR 538



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 206/504 (40%), Gaps = 67/504 (13%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           ++++ Y     FE +  LF E   +D+V+WN MI   V NR +      F  M E     
Sbjct: 95  AMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER---- 150

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM-------------- 117
           D  +   I+S   Q  C+   R V     +   ++ ++L + +V                
Sbjct: 151 DVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRE 210

Query: 118 -------------YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE 164
                        + K   +  +   F  M   D VSWNTI++G   N   ++    F E
Sbjct: 211 NWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE 270

Query: 165 ------MGWSG-----------EQA----DNVSLSSAVAASACLGELSYGKVIHALGIKL 203
                   W+            E+A    D +   + V+ +A L     G+ +       
Sbjct: 271 SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF 330

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
                  VS  N++I+ Y+QCG I  A+  F  M  +D VSW A+I G++ +G   EA  
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALR 390

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           L   M+       + ++  + +S CAD + L  G+ +HG  ++        + N+L+  Y
Sbjct: 391 LFVLME-REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 449

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
            K  S+ +A  LF  +A   D+VSWN+MI+G             F+ M     +   +T+
Sbjct: 450 CKCGSIEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATM 508

Query: 372 LAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           +A+L +C+    ++ G+   H      G   N+     ++ +    G L  A +L++ + 
Sbjct: 509 VAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMP 568

Query: 431 HNSDTSCWNIVIVACTQNGHFQEA 454
              D + W  ++ A   +G+ + A
Sbjct: 569 FEPDAAIWGTLLGASRVHGNTELA 592



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 7/283 (2%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
           ++ T  +++T Y+       +  LF +   +D V+W AMI    ++      L  F  M 
Sbjct: 337 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLME 396

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
            EG R + ++    +S    +  L+ G+ +H   +K G      + N  + MY KCG + 
Sbjct: 397 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 456

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
            +   F  M   D VSWNT+++G   + + E+ L +F  M   G + D+ ++ + ++A +
Sbjct: 457 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACS 516

Query: 186 CLGELSYGK-VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVV 243
             G +  G+   H +    G    P       ++ +  + G +E A      M  + D  
Sbjct: 517 HTGLVDKGRQYFHTMTQDYGVR--PNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA 574

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
            W  ++    ++G  E A     ++  M   EP+ + +  L+S
Sbjct: 575 IWGTLLGASRVHGNTELAETAADKIFAM---EPENSGMYVLLS 614



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 160/391 (40%), Gaps = 59/391 (15%)

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           S +SD   WN+ I +  + G   EA++ FK M +  + S ++  +++     G  ELA  
Sbjct: 54  SGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNA--MISGYLRNGEFELA-- 109

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
                 +    +   D    N +I  Y R R++  A  +FE     ++C+WN ++S ++Q
Sbjct: 110 -----RMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQ 164

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILS----------ACTQLGVLRHGKQIHGHVFHLG 599
           N     A  +F  +  E N++S  ++LS          AC   G   +   +  +    G
Sbjct: 165 NGCVDDARRVFDRMP-EKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGG 223

Query: 600 FQENSFISSALLDMYS-NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV 658
           F +   I  A     S   +   +W+++I+ Y  +G+  EA +LF E     +     + 
Sbjct: 224 FVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV----FTW 279

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEE------------------------YDVRP--ETE 692
            +++S    + +V+E  + ++ M E                         +DV P     
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVS 339

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
               ++    + GK+ EA      +P +  P  W AM++  S  G +    +   L   +
Sbjct: 340 TWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS---YEALRLFVLM 395

Query: 753 EPENVGYYISLSNMYVALGRWKD--AVEIGK 781
           E E  G  ++ S+   AL    D  A+E+GK
Sbjct: 396 ERE--GGRLNRSSFSSALSTCADVVALELGK 424


>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 723

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 189/606 (31%), Positives = 315/606 (51%), Gaps = 45/606 (7%)

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G+E   YVSV NS+   Y +CGD+ +  RAF  M  +D VSWN I+ G   +G  EE   
Sbjct: 64  GFE--SYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLW 121

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
              ++++    EP+++T+V +I  C    L  +G  +HGY IR        + NS++  Y
Sbjct: 122 WFSKLRVW-GFEPNVSTLVLVIHACRS--LWFDGEKIHGYVIRSGFWRISSVQNSILCLY 178

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLC-SQFSFST 370
           S+ +SLS A  LF+ ++   D++SW+ +I              LFKEM+    ++    T
Sbjct: 179 SEFDSLS-ARKLFDEMSE-RDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVT 236

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRI 429
           + ++L +C   + ++ G+S+H + ++ GF    + V N+L+ MY    D  +AF +    
Sbjct: 237 VTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDET 296

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
           +  +  S WN ++     N  + EA++ F+ M +++    D VTLV+++  C   E    
Sbjct: 297 TCRNIVS-WNSILAGFVYNQRYDEALEMFRLM-KKEALEADEVTLVSLLQVCKFFEHPLP 354

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            KS+HG+ ++     +    ++L+  Y  C  +  A TVF+S    ++ + + MIS   +
Sbjct: 355 CKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGR 414

Query: 550 NKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF-ISS 608
                 A+ +F  +  +PN I+++S+LSAC+   VLR  K  HG     G   N   + +
Sbjct: 415 CGRSDEAISIFCQMRDKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDT 474

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +++D Y+ C               KS  +W+ +ISAY  +G   +A+  F EM      P
Sbjct: 475 SIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEMKRDSYTP 534

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + ++ LSAC+H GLV +GL  + +M+EE D +P  +H+ CIVDML R+G++  A E 
Sbjct: 535 NAVTYLAALSACNHGGLVKKGLMIFRSMVEE-DQKPSLQHYSCIVDMLSRAGEIDTAMEL 593

Query: 714 IKNLPIQPKPG--VWGAMLSACSHHGDTKM--GKQVAELLFKLEPENVGYYISLSNMYVA 769
           IKNLP   K G   WGA+LS C +   + +   + VAE+L +LEP     Y+  S+++ A
Sbjct: 594 IKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVVAEVL-ELEPLCSSGYLLASSVFAA 652

Query: 770 LGRWKD 775
              W D
Sbjct: 653 EKSWVD 658



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 277/561 (49%), Gaps = 49/561 (8%)

Query: 52  RCVVMGLHFFGEMVEEGIRF-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           R VV G   + E+   GI+F D     I+  A  +++ L QG   +            S+
Sbjct: 26  REVVSG---YSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQGFESYV-----------SV 71

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSG 169
            N   + Y KCGDL S    F  M+  D+VSWN I+ G L + + E+ L +F ++  W  
Sbjct: 72  GNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFSKLRVWGF 131

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           E   NVS +  +   AC      G+ IH   I+ G+      SV NS++ +YS+  D  +
Sbjct: 132 EP--NVS-TLVLVIHACRSLWFDGEKIHGYVIRSGFW--RISSVQNSILCLYSEF-DSLS 185

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A + F  M+ +DV+SW+ +I  +  + +     +L  EM      EPD  TV +++  CA
Sbjct: 186 ARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSVLKACA 245

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLL---MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
               +  GRSVHG++IRR  G+DL+   + NSL+D YSK      A  +F+     N +V
Sbjct: 246 VLDDIDVGRSVHGFSIRR--GFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRN-IV 302

Query: 347 SWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQ 394
           SWNS+++G           EM  L  + +      TL+++L  C   E     KSIH   
Sbjct: 303 SWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGVI 362

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           ++ G+ +N + +++LM  Y +C  +  A ++   +S+    SC + +I    + G   EA
Sbjct: 363 IRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSC-STMISGLGRCGRSDEA 421

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALI 513
           I  F  M  +    P+++T+++++SAC    +    K  HG+A++  + + D  V  +++
Sbjct: 422 ISIFCQMRDK----PNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSIV 477

Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEI 570
             Y +C  I  A   F+     ++ +W  +ISA++ N    +AL  F  ++   + PN +
Sbjct: 478 DAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEMKRDSYTPNAV 537

Query: 571 SIVSILSACTQLGVLRHGKQI 591
           + ++ LSAC   G+++ G  I
Sbjct: 538 TYLAALSACNHGGLVKKGLMI 558



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 259/501 (51%), Gaps = 19/501 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +GF +++    S+   Y       S L  F    ++D V+WN ++   +++     GL +
Sbjct: 63  QGFESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWW 122

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F ++   G   + +TL++++ A   +     G  +H   I++G    SS+ N  + +Y++
Sbjct: 123 FSKLRVWGFEPNVSTLVLVIHACRSL--WFDGEKIHGYVIRSGFWRISSVQNSILCLYSE 180

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
              L S+   F  M   D +SW+ ++   + +  P   L  F+EM    + + D V+++S
Sbjct: 181 FDSL-SARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTS 239

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + A A L ++  G+ +H   I+ G+ D   V V NSLI MYS+  D ++A R F   TC
Sbjct: 240 VLKACAVLDDIDVGRSVHGFSIRRGF-DLVDVFVRNSLIDMYSKGYDADSAFRVFDETTC 298

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +++VSWN+I+ GF  N +++EA ++   M+   ++E D  T+V+L+ +C         +S
Sbjct: 299 RNIVSWNSILAGFVYNQRYDEALEMFRLMK-KEALEADEVTLVSLLQVCKFFEHPLPCKS 357

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-- 357
           +HG  IRR    + + ++SLMD Y+  + +  A  +F++++   D+VS ++MISGL +  
Sbjct: 358 IHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMS-YKDVVSCSTMISGLGRCG 416

Query: 358 ---EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-AL 409
              E + +  Q        T++++L +C+    L   K  H   ++ G + N I V+ ++
Sbjct: 417 RSDEAISIFCQMRDKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSI 476

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           +  Y  CG +  A     +I+  S  S W ++I A   NG   +A+ +F  M ++ + +P
Sbjct: 477 VDAYAKCGAIDIARRTFDQITEKSIVS-WTVIISAYAINGLPDKALASFDEM-KRDSYTP 534

Query: 470 DSVTLVNVISACGNLELAFEG 490
           ++VT +  +SAC +  L  +G
Sbjct: 535 NAVTYLAALSACNHGGLVKKG 555



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 222/461 (48%), Gaps = 25/461 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        S+L  YS      S+  LF E   +DV++W+ +I + V+++  V+GL  F
Sbjct: 163 GFWRISSVQNSILCLYSEFDSL-SARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELF 221

Query: 62  GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYA 119
            EMV E     D  T+  ++ A   ++ +  GR VH  SI+ G  + D  + N  ++MY+
Sbjct: 222 KEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYS 281

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K  D +S+   F    C + VSWN+I++G ++N   ++ L  FR M     +AD V+L S
Sbjct: 282 KGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVS 341

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +            K IH + I+ GYE +      +SL+  Y+ C  ++ A   F  M+ 
Sbjct: 342 LLQVCKFFEHPLPCKSIHGVIIRRGYESNEV--ALSSLMDAYTSCSLVDDARTVFDSMSY 399

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KDVVS + +I G    G+ +EA  +  +M+     +P+  TV++L+S C+ S +LR  + 
Sbjct: 400 KDVVSCSTMISGLGRCGRSDEAISIFCQMR----DKPNAITVISLLSACSVSAVLRTSKW 455

Query: 300 VHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
            HG AIRR L   D+ +  S++D Y+K  ++  A   F+ I     +VSW  +IS     
Sbjct: 456 AHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITE-KSIVSWTVIISAYAIN 514

Query: 354 GL-------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           GL       F EM       +  T LA L +CN    ++ G  I    ++     +    
Sbjct: 515 GLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQHY 574

Query: 407 NALMHMYINCGDLVAAFSLLQRISHN--SDTSCWNIVIVAC 445
           + ++ M    G++  A  L++ +  +  +  S W  ++  C
Sbjct: 575 SCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGC 615


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 184/629 (29%), Positives = 297/629 (47%), Gaps = 76/629 (12%)

Query: 222 SQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD---I 278
           + C  +E+A+  F  +    + S    +  F   G   +AF  +  ++L  S       +
Sbjct: 115 ASCNALESAQETFTSVDASMIDSLLTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIV 174

Query: 279 ATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF-- 336
             + +L+S C D   L EGR +HG+ I        +++  L+ FYS  N L  A ++   
Sbjct: 175 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 234

Query: 337 -NAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPES 383
            N + P      WN +IS              +K+M+    +    T  ++L +C     
Sbjct: 235 SNILHPF----PWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELD 290

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
           L FGK +H          + I  NAL+ MY  CG +  A  L  +I    D   WN +I 
Sbjct: 291 LGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER-DAVSWNSMIS 349

Query: 444 ACTQNGHFQEAIKTFKSM----------------------------------TQQQNASP 469
                G + EA + F SM                                   ++  +  
Sbjct: 350 VYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHL 409

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV L+  + AC ++  A  GK +H  A++S  G    V+N+LITMY RC+D+K A  +F
Sbjct: 410 DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF 469

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
           +     +L +WN +IS          A  L R +     EPN ++I S+L  C ++  L+
Sbjct: 470 QLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQ 529

Query: 587 HGKQIHGHVFHL-GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
           HGK+ H ++     F+++  + +AL+DMY+                 +    ++SMI+ Y
Sbjct: 530 HGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY 589

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
           G  G+G  A++LF EM N  I+P   ++I++LSACSHSGLV +G   +  M   Y + P 
Sbjct: 590 GMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPH 649

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH  C+ D+ GR+G L +A E I+N+P +P P +W  ++ AC  H +T++G+  AE L 
Sbjct: 650 LEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLL 709

Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +++PEN GYY+ ++NMY A G W    ++
Sbjct: 710 EMKPENPGYYVLIANMYAAAGCWNKLAKV 738



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 237/534 (44%), Gaps = 60/534 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H      L+T YS  +    +  +   +       WN +I++ V N      L  +
Sbjct: 204 GFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAY 263

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC-NVFVNMYAK 120
            +MV++GIR D+ T   ++ A  +   L  G+ VH  SI A  I  S +  N  ++MY K
Sbjct: 264 KQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH-ESINASRIKWSLIVHNALISMYGK 322

Query: 121 CGDLNSSECTFSGMHCADTVS-----------------------------------WNTI 145
           CG +  +   F  +   D VS                                   WNTI
Sbjct: 323 CGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTI 382

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK--L 203
             G L     +  L    +M   G   D+V+L   + A + +G+   GK IH+  I+   
Sbjct: 383 AGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCF 442

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G  D    +V NSLI+MYS+C D++ A   F  M  K ++SWN+II G     + EEA  
Sbjct: 443 GEVD----TVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASF 498

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD-LLMMNSLMDF 322
           LL EM L+  +EP+  T+ +++ LCA    L+ G+  H Y  RR    D LL+ N+L+D 
Sbjct: 499 LLREM-LLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDM 557

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFST 370
           Y++S  + +A  +F+ +    D +++ SMI+G            LF+EM     +    T
Sbjct: 558 YARSGKVLEARRVFDMLGE-RDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHIT 616

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           ++A+L +C+    +  G+ +      L G + +      +  ++   G L  A  +++ +
Sbjct: 617 MIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNM 676

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV-NVISACG 482
            +    + W  +I AC  + + +      + + + +  +P    L+ N+ +A G
Sbjct: 677 PYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAG 730



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 223/517 (43%), Gaps = 54/517 (10%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++S+ T +  L +GR +H   I  G      L    V  Y+    L  +       +   
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 239

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH- 197
              WN ++S  + N + +K L  +++M   G + DN +  S + A     +L +GK +H 
Sbjct: 240 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHE 299

Query: 198 -------------------------ALGIKLG-YEDSPYVSVT--NSLISMYSQCGDIEA 229
                                     +GI    ++  P       NS+IS+Y+  G    
Sbjct: 300 SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNE 359

Query: 230 AERAFWGMTCKD----VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLI 285
           A   F  M  +D    ++ WN I  G+   G ++ A +LL +M+   S    +A ++ L 
Sbjct: 360 AFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGL- 418

Query: 286 SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
             C+     + G+ +H +AIR   G    + NSL+  YS+   L  A LLF  +     L
Sbjct: 419 GACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQ-LMEAKSL 477

Query: 346 VSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW 393
           +SWNS+ISG            L +EML    + ++ T+ ++LP C    +L+ GK  HC+
Sbjct: 478 ISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCY 537

Query: 394 QLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             +   F ++ +  NAL+ MY   G ++ A  +   +    D   +  +I      G  Q
Sbjct: 538 MTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER-DKMTYTSMIAGYGMQGEGQ 596

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN-- 510
            A+K F+ M   Q   PD +T++ V+SAC +  L  +G+ L    ++SL GL   +++  
Sbjct: 597 AALKLFEEMNNFQ-IKPDHITMIAVLSACSHSGLVTQGQLLFE-KMRSLYGLTPHLEHFA 654

Query: 511 ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
            +  ++GR   +  A  +  +  Y      W  +I A
Sbjct: 655 CMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 691


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 179/609 (29%), Positives = 278/609 (45%), Gaps = 124/609 (20%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA---------------- 340
           G+S+H   I+  L   + +MN+LM+FY+K+  +  A  +F+ +                 
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 341 --------------PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAI 374
                         P  D VSW +MI G            +F+EM+      +  TL  +
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS- 433
           L SC + E L  G+ +H + +K G S+     N+L++MY   GD V A  +  R+   S 
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 434 -----------------------------DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
                                        D   WN +I    Q+G  +EA+  F  M   
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR---- 520
            ++ PD  TL + +SAC NLE    GK +H   +++       V NALI+MY +      
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331

Query: 521 -----------------------------DIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
                                        DI  A  +F+S    ++  W  MI  + QN 
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391

Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
               A+ELFR +  E   PN  ++ ++LS  + L  L HG+QIH      G   +  +S+
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451

Query: 609 ALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
           AL+ MY+                  +    W+SMI A   HG G EA+ LF  M  +GI+
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK 511

Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYE 712
           P   + + +LSAC+H GLV++G  YYN M   + + P   H+ C++D+ GR+G LQEA+ 
Sbjct: 512 PDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHA 571

Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGR 772
           FI+N+PI+P    WG++L++C  H + ++ +  AE L  +EPEN G Y +L+N+Y A G+
Sbjct: 572 FIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQ 631

Query: 773 WKDAVEIGK 781
           W++A  I K
Sbjct: 632 WENAANIRK 640



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 248/553 (44%), Gaps = 87/553 (15%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N+ ++ YAK G L  +   F  M   D+VSW  ++ G       E  +  FREM      
Sbjct: 83  NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD----- 226
               +L++ +A+ A +  L  G+ +H+  +K G   S Y+SV NSL++MY++ GD     
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGL--SSYISVANSLLNMYAKSGDPVTAK 200

Query: 227 --------------------------IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
                                     ++ A+  F  M  +DVVSWNA+I G+  +G   E
Sbjct: 201 IVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDRE 260

Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR------------- 307
           A D+  +M +  S +PD  T+ + +S CA+   L+ G+ +H + IR              
Sbjct: 261 ALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALI 320

Query: 308 --------------------LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
                               +   D++   +L+D Y K   ++ A  +F+++  + D+V+
Sbjct: 321 SMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR-VRDVVA 379

Query: 348 WNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           W +MI G            LF+ M+    + +  TL  +L   +S  SL+ G+ IH    
Sbjct: 380 WTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASAT 439

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           + G +++    NAL+ MY   G +  A  +   I    DT  W  +I+A  Q+G  +EA+
Sbjct: 440 RSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEAL 499

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LIT 514
             F+ M  +    PD +T V V+SAC ++ L  +G+S + L   +   + T    A +I 
Sbjct: 500 TLFERML-ENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMID 558

Query: 515 MYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNE--- 569
           ++GR   ++ A    E+     ++  W  ++++   +K  E+  +   R L  EP     
Sbjct: 559 LFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGA 618

Query: 570 -ISIVSILSACTQ 581
             ++ ++ SAC Q
Sbjct: 619 YSALANVYSACGQ 631



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 234/555 (42%), Gaps = 84/555 (15%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +L+ Y+     E +  +F E    D V+W AMI    +       +  F EMV + +   
Sbjct: 85  ILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPT 144

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL  ++++   + CL  GR VH   +K G+ +  S+ N  +NMYAK GD  +++  F 
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFD 204

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM------GW------------------- 167
            M    T SWNT++S  + +   +   + F +M       W                   
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264

Query: 168 -------SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
                  S  + D  +L+SA++A A L  L  GK IHA  I+  ++   + +V N+LISM
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD--TFGAVGNALISM 322

Query: 221 YSQCG---------------------------------DIEAAERAFWGMTCKDVVSWNA 247
           YS+ G                                 DI  A R F  +  +DVV+W A
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTA 382

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  NG  ++A +L   M +    +P+  T+ T++S+ +    L  GR +H  A R 
Sbjct: 383 MIVGYVQNGFNQDAMELFRSM-IKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
                + + N+L+  Y+KS S++ A  +FN I    D ++W SMI              L
Sbjct: 442 GNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTL 501

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIH-CWQLKLGFSNNTIGVNALMHMYI 414
           F+ ML    +    T + +L +C     +E G+S +   Q              ++ ++ 
Sbjct: 502 FERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFG 561

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAIKTFKSMTQQQNASPDSV 472
             G L  A + ++ +    D   W  ++ +C   +N    E       + + +N+   S 
Sbjct: 562 RAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYS- 620

Query: 473 TLVNVISACGNLELA 487
            L NV SACG  E A
Sbjct: 621 ALANVYSACGQWENA 635



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 119/241 (49%), Gaps = 3/241 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+LL  Y  +     +  +F     +DVV W AMI   V+N      +  F  M++EG +
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            ++ TL  ++S  + +  L  GR +H  + ++G  +  S+ N  + MYAK G +N +   
Sbjct: 410 PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWV 469

Query: 131 FSGMHCA-DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           F+ +H   DT++W +++     +   E+ L  F  M  +G + D+++    ++A   +G 
Sbjct: 470 FNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGL 529

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAI 248
           +  G+  + L ++  ++  P  S    +I ++ + G ++ A      M  + DV++W ++
Sbjct: 530 VEQGRSYYNL-MQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSL 588

Query: 249 I 249
           +
Sbjct: 589 L 589



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 78/375 (20%), Positives = 156/375 (41%), Gaps = 88/375 (23%)

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE-----SCYNCNL----- 537
           F GKS+H   +K+ + L   + N L+  Y +   I  A  VF+     S ++ N+     
Sbjct: 30  FTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGY 89

Query: 538 ---------------------CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIV 573
                                 +W  MI  ++Q      A+ +FR +   +  P + ++ 
Sbjct: 90  AKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLT 149

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           ++L++C  +  L  G+++H  V   G      ++++LL+MY+                 K
Sbjct: 150 NVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLK 209

Query: 619 SNAAWSSMISA-------------------------------YGYHGKGWEAIELFHEMC 647
           S ++W++MIS+                               Y  HG   EA+++F +M 
Sbjct: 210 STSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKML 269

Query: 648 -NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSG 705
            +S  +P K ++ S LSAC++   +  G Q + +++  E+D      +   ++ M  +SG
Sbjct: 270 MDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN--ALISMYSKSG 327

Query: 706 KLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLS 764
            ++ A + I+   I     + + A+L      GD    +++ +    L   +V  + ++ 
Sbjct: 328 GVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD---SLRVRDVVAWTAMI 384

Query: 765 NMYVALGRWKDAVEI 779
             YV  G  +DA+E+
Sbjct: 385 VGYVQNGFNQDAMEL 399


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 259/496 (52%), Gaps = 36/496 (7%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---------EMLYLCSQFS 367
           N L+  +      + A LLF+ I P  +  ++N MI GL           E  Y    F 
Sbjct: 63  NFLLHRFIDLKDFNNASLLFSQI-PYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFG 121

Query: 368 FS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
                 T   +  +C +   L  G+  H   LK G   +    ++L+ MY  CG+L  A 
Sbjct: 122 IRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCAR 181

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +   IS   D   WN +I   ++ G+  +A+  F  M +     PD +TLV+++ ACG+
Sbjct: 182 RVFDEISEK-DLVSWNSMISGYSRMGYAGDAVGLFGEM-RDAGFEPDEMTLVSILGACGD 239

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L     G  + G  +++ M L++ V +ALI MYG+C D+ SA  VF+     ++ TWN M
Sbjct: 240 LGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAM 299

Query: 544 ISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           I+ ++QN     A+ LF   R     P++I++V +LSAC  +G L  GK +  +    G 
Sbjct: 300 ITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGL 359

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
           Q + ++S+AL+DMY+ C               K+  +W++MISA  +HG+  E++ LF  
Sbjct: 360 QNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKR 419

Query: 646 MCNSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
           M   G  +RP   S I +LSAC H+GLVDEG Q ++ M   + + P+ EHH C+VD+L R
Sbjct: 420 MSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLAR 479

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G + EA++FI+ +P +P   V GA+L AC    +  + ++V  +L ++EP N G YI  
Sbjct: 480 AGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIIS 539

Query: 764 SNMYVALGRWKDAVEI 779
           S ++  + RW D+  +
Sbjct: 540 SKIFANMKRWDDSARM 555



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 227/485 (46%), Gaps = 56/485 (11%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIRF 71
           LL  + ++  F ++  LF +    +   +N MI       +   + + F+ +M + GIR 
Sbjct: 65  LLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRP 124

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           ++ T   +  A   +  L  G+  H   +K+G+ AD  + +  + MY++CG+L  +   F
Sbjct: 125 NNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVF 184

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D VSWN+++SG     Y    +  F EM  +G + D ++L S + A   LG+L 
Sbjct: 185 DEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLG 244

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  I    ++   + + +V   ++LI MY +CGD+ +A R F  M  KDVV+WNA+I G
Sbjct: 245 LGSWIEGFVVENEMDLNSFVG--SALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITG 302

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +A NG  +EA  L   M+    V PD  T+V ++S CA    L  G+ +  YA  R L  
Sbjct: 303 YAQNGVSDEAIILFSGMR-ESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQN 361

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF-----KEMLYLCSQF 366
           D+ +  +L+D Y+K  SL  A  +F  + P  + VSWN+MIS L      +E L L  + 
Sbjct: 362 DIYVSTALIDMYAKCGSLDDALRVFEDM-PQKNEVSWNAMISALAFHGRPQESLSLFKRM 420

Query: 367 SFS---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           S           + + +L +C     ++ G+ +                           
Sbjct: 421 SKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLF-------------------------- 454

Query: 418 DLV-AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           DL+ ++F L+ +I H+S       ++    + GH  EA    + M ++    PD V L  
Sbjct: 455 DLMSSSFGLVPKIEHHS------CMVDLLARAGHVHEAWDFIEKMPEK----PDEVVLGA 504

Query: 477 VISAC 481
           ++ AC
Sbjct: 505 LLGAC 509



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 150/290 (51%), Gaps = 3/290 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SL+T YS       +  +F E   KD+V+WN+MI+           +  FGEM + G   
Sbjct: 166 SLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEP 225

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL+ I+ A   +  L  G  +    ++  M  +S + +  + MY KCGDL+S+   F
Sbjct: 226 DEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVF 285

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   D V+WN +++G   N   ++ ++ F  M  SG   D ++L   ++A A +G L 
Sbjct: 286 DRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALD 345

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +GK +     + G ++  YVS   +LI MY++CG ++ A R F  M  K+ VSWNA+I  
Sbjct: 346 FGKWLDTYASERGLQNDIYVST--ALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISA 403

Query: 252 FALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            A +G+ +E+  L   M +   +V P+  + + ++S C  + L+ EGR +
Sbjct: 404 LAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQL 453



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 3/222 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  Y       S+  +F     KDVVTWNAMIT   +N      +  F  M E G+ 
Sbjct: 266 SALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVN 325

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL+ ++SA   +  L  G+ +   + + G+  D  +    ++MYAKCG L+ +   
Sbjct: 326 PDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRV 385

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLG 188
           F  M   + VSWN ++S    +  P++ L  F+ M   G   + +++S    ++A    G
Sbjct: 386 FEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAG 445

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
            +  G+ +  L +   +   P +   + ++ + ++ G +  A
Sbjct: 446 LVDEGRQLFDL-MSSSFGLVPKIEHHSCMVDLLARAGHVHEA 486



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG    +  ST+L+  Y+     + +L +F +   K+ V+WNAMI+A   +      L  
Sbjct: 357 RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSL 416

Query: 61  FGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQGR-VVHCLSIKAGMIADSSLCNVFVNM 117
           F  M +EG  +R +  + + ++SA      + +GR +   +S   G++      +  V++
Sbjct: 417 FKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDL 476

Query: 118 YAKCGDLNSS 127
            A+ G ++ +
Sbjct: 477 LARAGHVHEA 486


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 164/545 (30%), Positives = 279/545 (51%), Gaps = 47/545 (8%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           ++   V  +  CAD   L +G+ +H   I          + SL++ YSK   + +A L+F
Sbjct: 10  NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69

Query: 337 NAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESL 384
                  ++ ++N++ISG             +K+M          T   ++ +C   E +
Sbjct: 70  YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC--CEVM 127

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
           E  K IH   LK+G   +    +AL++ Y+  G +  A  +   +S   D   WN +I  
Sbjct: 128 EV-KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWNAMING 185

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL 504
             + G   EA++ F+ M   +  +P   T+  ++S   +      GK++HG+ +K  MG 
Sbjct: 186 YAKIGCLDEALEVFRRM-HVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMK--MGY 242

Query: 505 DT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
           D+   V NALI MYG+C+ I  A  +FE     ++ +WN +IS   Q       L LF  
Sbjct: 243 DSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDK 302

Query: 563 L---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ--------ENSFISSALL 611
           +      P+ ++I ++L AC+ L  L HG++IHG++   G          +N  +S+A++
Sbjct: 303 MLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVM 362

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+ C               K  A+W+ MI  YG HG   EA+ +F +MC +  +P + 
Sbjct: 363 DMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEV 422

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
           +++ +LSAC+H+G V  G  +   M   + V P  EH+ C++DMLGR+G L++AYE ++ 
Sbjct: 423 TLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQK 482

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +PIQ  P VW A+L AC  HG+ ++ +  A  + +LEPE+ G Y+ +SN+Y  +GR+++ 
Sbjct: 483 MPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEV 542

Query: 777 VEIGK 781
           +E+ K
Sbjct: 543 LEVRK 547



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 270/573 (47%), Gaps = 78/573 (13%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSWNA 247
           L+ GK +H+L I  G+  SP  S+T SLI+MYS+CG +  A   F+   C  ++V ++NA
Sbjct: 27  LNKGKQLHSLMITYGFSPSP-PSIT-SLINMYSKCGQMGEAILVFYD-PCHERNVFAYNA 83

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II GF  NG   + F    +M+L   V PD  T   ++  C + +   E + +HG  ++ 
Sbjct: 84  IISGFVSNGLASKGFQFYKKMRL-EGVMPDKYTFPCVVRTCCEVM---EVKKIHGCLLKM 139

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
            L  D+ + ++L++ Y K+ S+  A+ +F  ++ + D+V WN+MI+G            +
Sbjct: 140 GLELDVFVGSALVNTYLKNGSMEDAQKVFGELS-IRDVVLWNAMINGYAKIGCLDEALEV 198

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
           F+ M       S  T+  IL    S   L+ GK++H   +K+G+ +     NAL+ MY  
Sbjct: 199 FRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGK 258

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
           C  +  A  + + I+   D   WN +I    Q G     ++ F  M       PD VT+ 
Sbjct: 259 CKHIGDALIIFEMINE-KDIFSWNSIISVHEQCGDHDGTLRLFDKML-GSGILPDLVTIT 316

Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTR--------VQNALITMYGRCRDIKSAST 527
            V+ AC +L     G+ +HG  + + +G D          V NA++ MY +C  + +A  
Sbjct: 317 TVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALK 376

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
           +F+S    ++ +WN MI  +  +   + AL +F  +   EF+PNE+++V +LSAC   G 
Sbjct: 377 IFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGF 436

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
           + HG+        L   E++F     ++ Y         + +I   G  G   +A E+  
Sbjct: 437 VSHGR------LFLAQMESTFGVIPTIEHY---------TCVIDMLGRAGHLEDAYEIVQ 481

Query: 645 EMCNSGIRPTKSSVI---SLLSACSHSGLVDEGLQYYNNMLEEYDVRP----ETEH---H 694
           +M      P +++ +   +LL AC   G         N  L E   R     E EH   +
Sbjct: 482 KM------PIQANPVVWRALLGACRLHG---------NAELAEIAARQVLQLEPEHCGSY 526

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLP---IQPKPG 724
           V + ++ G  G+ +E  E  K +    ++  PG
Sbjct: 527 VLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPG 559



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 240/517 (46%), Gaps = 42/517 (8%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHF 60
           GF    P+ TSL+  YS       ++ +FY+ C+ ++V  +NA+I+  V N     G  F
Sbjct: 41  GFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQF 100

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           + +M  EG+  D  T   +V    ++  +K+   +H   +K G+  D  + +  VN Y K
Sbjct: 101 YKKMRLEGVMPDKYTFPCVVRTCCEVMEVKK---IHGCLLKMGLELDVFVGSALVNTYLK 157

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G +  ++  F  +   D V WN +++G       ++ L  FR M   G      +++  
Sbjct: 158 NGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGI 217

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++  A  G+L  GK +H + +K+GY+    VSV+N+LI MY +C  I  A   F  +  K
Sbjct: 218 LSVFASRGDLDNGKTVHGIVMKMGYDSG--VSVSNALIDMYGKCKHIGDALIIFEMINEK 275

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+ SWN+II      G  +    L  +M L   + PD+ T+ T++  C+    L  GR +
Sbjct: 276 DIFSWNSIISVHEQCGDHDGTLRLFDKM-LGSGILPDLVTITTVLPACSHLAALMHGREI 334

Query: 301 HGYAIRRLLGYD--------LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           HGY I   LG D        LL+ N++MD Y+K  S++ A  +F++++   D+ SWN MI
Sbjct: 335 HGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSK-KDVASWNIMI 393

Query: 353 S------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
                        G+F +M     + +  TL+ +L +CN    +  G+      L L   
Sbjct: 394 MGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGR------LFLAQM 447

Query: 401 NNTIGVNALMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
            +T GV   +  Y          G L  A+ ++Q++   ++   W  ++ AC  +G+ + 
Sbjct: 448 ESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAEL 507

Query: 454 AIKTFKSMTQQQNASPDSVTLV-NVISACGNLELAFE 489
           A    + + Q +     S  L+ NV    G  E   E
Sbjct: 508 AEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLE 544



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 241/506 (47%), Gaps = 39/506 (7%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF-SGMHCADTVSWNTIMS 147
           L +G+ +H L I  G           +NMY+KCG +  +   F    H  +  ++N I+S
Sbjct: 27  LNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIIS 86

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G + N    K   ++++M   G   D  +    V     + E+   K IH   +K+G E 
Sbjct: 87  GFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLLKMGLEL 143

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +V   ++L++ Y + G +E A++ F  ++ +DVV WNA+I+G+A  G  +EA ++   
Sbjct: 144 DVFVG--SALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRR 201

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSK 325
           M + + V P   T+  ++S+ A    L  G++VHG  ++  +GYD  + + N+L+D Y K
Sbjct: 202 MHV-KGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMK--MGYDSGVSVSNALIDMYGK 258

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLA 373
              +  A ++F  I    D+ SWNS+IS             LF +ML         T+  
Sbjct: 259 CKHIGDALIIFEMINE-KDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITT 317

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFS--------NNTIGVNALMHMYINCGDLVAAFSL 425
           +LP+C+   +L  G+ IH + +  G          +N +  NA+M MY  CG +  A  +
Sbjct: 318 VLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKI 377

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
              +S   D + WNI+I+    +G+  EA+  F  M + +   P+ VTLV V+SAC +  
Sbjct: 378 FDSMS-KKDVASWNIMIMGYGMHGYALEALGMFSQMCEAE-FKPNEVTLVGVLSACNHAG 435

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNC 542
               G+ L    ++S  G+   +++   +I M GR   ++ A  + +      N   W  
Sbjct: 436 FVSHGR-LFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494

Query: 543 MISAFS-QNKAEVRALELFRHLEFEP 567
           ++ A      AE+  +   + L+ EP
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEP 520


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 175/621 (28%), Positives = 307/621 (49%), Gaps = 53/621 (8%)

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA----FDL 264
           P V+V  +  S +   G  ++       ++  D  +WN      A NG   EA     D+
Sbjct: 5   PSVAVPVA-ASGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDV 63

Query: 265 LHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
              M ++R  +    A  V L+ +C ++  L   R++HG+ ++     D+ +  SL++ Y
Sbjct: 64  GEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAY 123

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
            +  +   A  LF+ + P  ++V+W ++I+G            +F EML      S  TL
Sbjct: 124 MRCGASQDARSLFDQM-PEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTL 182

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
            A+L +C++  + + G  +H + +K    S  +IG N+L  MY   G L +A     R+ 
Sbjct: 183 GAMLNACSASNNADLGSQVHGYTIKYRALSITSIG-NSLCRMYAKSGSLESAMRAF-RMV 240

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFE 489
            + +   W  +I AC ++ ++ E   T           P+  TL +V+S CG  L+L   
Sbjct: 241 PDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNL- 299

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           GK +     K     +  V+N+ + +Y R  +   A   FE   + ++ TWN MIS ++Q
Sbjct: 300 GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ 359

Query: 550 -----------NKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
                           +AL++FR+L+    +P+  +  SILS C+ +  L  G+QIH   
Sbjct: 360 IMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQT 419

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
              GF  +  ++SAL++MY+ C               ++   W+SMIS Y  HG+  EAI
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAI 479

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF +M  +G+RP + + + +LSACS++GL ++   Y++ M EEY + P  +H+ C+VDM
Sbjct: 480 QLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDM 539

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
             R G+L +A+ FI+    +P   +W ++++ C  HG+ ++    A+ L +L P+ +  Y
Sbjct: 540 FVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETY 599

Query: 761 ISLSNMYVALGRWKDAVEIGK 781
           + L NMY++  RW D   + K
Sbjct: 600 VLLLNMYISNERWHDVARVRK 620



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 236/481 (49%), Gaps = 35/481 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  +TSL+ AY      + + +LF +   K+VVTW A+IT    N  ++  L  F
Sbjct: 108 GTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVF 167

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM+E G      TL  +++A +  N    G  VH  +IK   ++ +S+ N    MYAK 
Sbjct: 168 VEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKS 227

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN-NYPEKCLLYFREMGWSGEQADNVSLSSA 180
           G L S+   F  +   + ++W T++S C  + NY E  L  F +M   G   +  +L+S 
Sbjct: 228 GSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSV 287

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++      +L+ GK + A   K+G + +  + V NS + +Y + G+ + A R F  M   
Sbjct: 288 MSLCGTRLDLNLGKQVQAFCFKIGCQTN--IPVKNSTMYLYLRKGETDEAMRFFEEMDDV 345

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLH-------EMQLMR-----SVEPDIATVVTLISLC 288
            +++WNA+I G+A     E A D LH        +++ R     +++PD+ T  +++S+C
Sbjct: 346 SIITWNAMISGYA--QIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVC 403

Query: 289 ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
           +  + L +G  +H   I+     D+++ ++L++ Y+K   +  A   F  ++ +  LV+W
Sbjct: 404 SSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMS-IRTLVTW 462

Query: 349 NSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ-L 395
            SMISG            LF++M +   + +  T + +L +C+     E  K+ H +  +
Sbjct: 463 TSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE--KAEHYFDMM 520

Query: 396 KLGFSNNTI--GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           K  +    I      ++ M++  G L  AF+ ++R     + + W+ ++  C  +G+ + 
Sbjct: 521 KEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMEL 580

Query: 454 A 454
           A
Sbjct: 581 A 581



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 240/551 (43%), Gaps = 74/551 (13%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+ EG    S   + ++    +   L   R +H   +K G  AD  +    VN Y +CG 
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
              +   F  M   + V+W  +++G   N+   + L  F EM  +G    + +L + + A
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            +       G  +H   IK  Y      S+ NSL  MY++ G +E+A RAF  +  K+V+
Sbjct: 189 CSASNNADLGSQVHGYTIK--YRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVI 246

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W  +I   A +  + E    L    LM  V P+  T+ +++SLC   L L  G+ V  +
Sbjct: 247 TWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------LFK 357
             +     ++ + NS M  Y +     +A   F  +  ++ +++WN+MISG        K
Sbjct: 307 CFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVS-IITWNAMISGYAQIMETAK 365

Query: 358 EMLYLCSQ--------------------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           + L+  S+                    F+FS++L++   C+S  +LE G+ IH   +K 
Sbjct: 366 DDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSV---CSSMMALEQGEQIHAQTIKT 422

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           GF ++ +  +AL++MY  CG +  A      +S  +  + W  +I   +Q+G  QEAI+ 
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVT-WTSMISGYSQHGRPQEAIQL 481

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS-----LMGLDTRVQNAL 512
           F+ M +     P+ +T V V+SAC          S  GLA K+     +M  + +++  +
Sbjct: 482 FEDM-RFAGVRPNEITFVCVLSAC----------SYAGLAEKAEHYFDMMKEEYKIE-PI 529

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISI 572
           +  YG                        CM+  F +      A    R   FEPNE   
Sbjct: 530 VDHYG------------------------CMVDMFVRLGRLDDAFAFIRRTGFEPNEAIW 565

Query: 573 VSILSACTQLG 583
            S+++ C   G
Sbjct: 566 SSLVAGCRSHG 576


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 257/499 (51%), Gaps = 35/499 (7%)

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY 361
           ++  +L+  Y     + +A  LF+ + P  D+V+W  MI+G            +F EM+ 
Sbjct: 44  VLATTLIKSYFGKGLIGEARTLFDEM-PERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                +  T+ ++L +C   + L +G+ +H   +K G        NALM MY  C   + 
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT-QQQNASPDSVTLVNVISA 480
              ++ R  H  +   W  +I   T        ++ F+ M  ++   +P S ++   + A
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIA--VRA 220

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C ++     G+ LH    K     +  V N+++ MY RC     A+  F      +L TW
Sbjct: 221 CTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITW 280

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I+ + ++     +L +F  +E   F PN  +  SI++AC  L  L  G+QIHG +  
Sbjct: 281 NTLIAGYERSNP-TESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR 339

Query: 598 LGFQENSFISSALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIEL 642
            G   N  +S+AL+DMYS C + A               +W++M+  YG HG G EA+EL
Sbjct: 340 RGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVEL 399

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F +M  SGIRP +   +++LSACSH+GLVDEGL+Y+  M+ +Y++ P+ E + C+VD+LG
Sbjct: 400 FDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLG 459

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           R+GK++EAYE I+++P +P   VWG  L AC  H    +GK  A  +  L P   G Y+ 
Sbjct: 460 RAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVM 519

Query: 763 LSNMYVALGRWKDAVEIGK 781
           LSN+Y A G+W +   + K
Sbjct: 520 LSNIYAADGKWGEFARLRK 538



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 217/461 (47%), Gaps = 25/461 (5%)

Query: 3   FLAHLPT--STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           F+   P+  +T+L+ +Y        +  LF E   +DVV W  MI               
Sbjct: 37  FIPKGPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMV 96

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+ E +  ++ T+  ++ A   M CL  GR+VH L+IK G+     + N  ++MYA 
Sbjct: 97  FCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYAT 156

Query: 121 CGDLNSSEC-TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           C       C  F G+H  + VSW T+++G  H +     L  FR+M     + +  S S 
Sbjct: 157 CCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSI 216

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
           AV A   +G  ++G+ +HA   K G+E +  + V NS++ MY +C     A R F+ M  
Sbjct: 217 AVRACTSIGSHTFGEQLHAAVTKHGFESN--LPVMNSILDMYCRCSCFSEANRYFYEMNQ 274

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           +D+++WN +I G+  +   E  +  +  M       P+  T  ++++ CA    L  G+ 
Sbjct: 275 RDLITWNTLIAGYERSNPTESLY--VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQ 332

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
           +HG  IRR L  +L + N+L+D YSK  +++ +  +F  ++   DLVSW +M+ G     
Sbjct: 333 IHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS-RRDLVSWTAMMIGYGTHG 391

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG---FSNNTI 404
                  LF +M+    +      +AIL +C+    ++ G  +  ++L +G    S +  
Sbjct: 392 YGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEG--LRYFKLMVGDYNISPDQE 449

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
               ++ +    G +  A+ L++ +    D   W   + AC
Sbjct: 450 IYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGAC 490



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 212/485 (43%), Gaps = 21/485 (4%)

Query: 108 SSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW 167
           S L    +  Y   G +  +   F  M   D V+W  +++G    N      + F EM  
Sbjct: 43  SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102

Query: 168 SGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGD 226
                +  ++SS + A   +  LSYG+++H L IK G +   ++ V N+L+ MY+  C  
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDG--FIYVDNALMDMYATCCVS 160

Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
           ++ A   F G+  K+ VSW  +I G+           +  +M L+  VE +  +    + 
Sbjct: 161 MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQM-LLEEVELNPFSFSIAVR 219

Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
            C        G  +H    +     +L +MNS++D Y + +  S+A   F  +    DL+
Sbjct: 220 ACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMN-QRDLI 278

Query: 347 SWNSMISGLFK----EMLYLCSQF---SFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
           +WN++I+G  +    E LY+ S      FS    T  +I+ +C +   L  G+ IH   +
Sbjct: 279 TWNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRII 338

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           + G   N    NAL+ MY  CG++  +  +   +S   D   W  +++    +G+ +EA+
Sbjct: 339 RRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR-DLVSWTAMMIGYGTHGYGEEAV 397

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALIT 514
           + F  M  +    PD V  + ++SAC +  L  EG     L +    +  D  +   ++ 
Sbjct: 398 ELFDKMV-RSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVD 456

Query: 515 MYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISI 572
           + GR   ++ A  + ES  +  + C W   + A   +    +  L   R L+  P+    
Sbjct: 457 LLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGT 516

Query: 573 VSILS 577
             +LS
Sbjct: 517 YVMLS 521



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 3/249 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF ++LP   S+L  Y   S F  +   FYE   +D++TWN +I A  E       L+ F
Sbjct: 241 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI-AGYERSNPTESLYVF 299

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG   +  T   I++A   +  L  G+ +H   I+ G+  + +L N  ++MY+KC
Sbjct: 300 SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKC 359

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++  S   F GM   D VSW  +M G   + Y E+ +  F +M  SG + D V   + +
Sbjct: 360 GNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAIL 419

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
           +A +  G +  G     L +   Y  SP   +   ++ +  + G +E A      M  K 
Sbjct: 420 SACSHAGLVDEGLRYFKLMVG-DYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKP 478

Query: 241 DVVSWNAII 249
           D   W   +
Sbjct: 479 DECVWGPFL 487



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 2/157 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +L  S +L+  YS       S  +F     +D+V+W AM+     +      +  
Sbjct: 340 RGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVEL 399

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F +MV  GIR D    + I+SA +    + +G R    +     +  D  +    V++  
Sbjct: 400 FDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLG 459

Query: 120 KCGDLNSS-ECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           + G +  + E   S     D   W   +  C  + +P
Sbjct: 460 RAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFP 496


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 178/633 (28%), Positives = 310/633 (48%), Gaps = 54/633 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           L  G+V  AL +   Y++ P+ +   TN++IS Y + GD+ +A   F  M  + VV+W  
Sbjct: 55  LRRGQVSAALKV---YDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTI 111

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++  +A N  F+EAF L    Q+ RS   PD  T  TL+  C D++       VH +A++
Sbjct: 112 LMGWYAGNNHFDEAFKLFR--QMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVK 169

Query: 307 RLLGYD----LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
             LG+D    L + N L+  Y +   L  A +LF  I    D V++N++I+G  K+ LY 
Sbjct: 170 --LGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD-KDSVTFNTLITGYEKDGLYT 226

Query: 363 ---------------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN 407
                           S F+FS    +L +         G+ +H   +  GFS +    N
Sbjct: 227 EAIHLFLKMRQSGHKPSDFTFS---GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGN 283

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            ++H Y     ++   +L   +    D   +N+VI + +Q   ++E++  F+ M Q    
Sbjct: 284 QILHFYSKHDRVLETRNLFNEMPE-LDFVSYNVVISSYSQAEQYEESLNLFREM-QCMGF 341

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
              +     ++S   NL     G+ +H  A+ +       V N+L+ MY +C     A  
Sbjct: 342 DRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAEL 401

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGV 584
           +F+S    +  +W  +IS + Q       L+LF   R      ++ +  ++L A      
Sbjct: 402 IFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFAS 461

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L  GKQ+H  +   G  EN F  S L+DMY+ C               ++  +W+++ISA
Sbjct: 462 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 521

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           Y  +G G  AI  F +M  SG++P   S++ +L ACSH G V++G +++  M   Y + P
Sbjct: 522 YADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITP 581

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
           + +H+ C++D+LGR+G+  EA + +  +P +P   +W ++L+AC  + +  + ++ AE L
Sbjct: 582 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQL 641

Query: 750 FKLEP-ENVGYYISLSNMYVALGRWKDAVEIGK 781
           F +E   +   Y+S+SN+Y A G+W++   + K
Sbjct: 642 FSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKK 674



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 164/666 (24%), Positives = 283/666 (42%), Gaps = 82/666 (12%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM---- 64
           ++ ++++ Y  +    S+  LF    ++ VVTW  ++     N         F +M    
Sbjct: 77  STNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSC 136

Query: 65  -VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS--SLCNVFVNMYAKC 121
            + + + F  TTLL   +     N + Q   VH  ++K G   +   ++CNV +  Y + 
Sbjct: 137 TLPDYVTF--TTLLPGCNDAVPQNAVGQ---VHAFAVKLGFDTNLFLTVCNVLLKSYCEV 191

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L+ +   F  +   D+V++NT+++G   +    + +  F +M  SG +  + + S  +
Sbjct: 192 RRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVL 251

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   L + + G+ +H L +  G+  S   SV N ++  YS+   +      F  M   D
Sbjct: 252 KAVVGLHDFALGQQLHGLSVTTGF--SRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            VS+N +I  ++   ++EE+ +L  EMQ M     +     T++S+ A+   L+ GR VH
Sbjct: 310 FVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFP-FATMLSIAANLSSLQVGRQVH 368

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
             AI       L + NSL+D Y+K     +AEL+F +++     VSW ++ISG       
Sbjct: 369 CQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS-QRSTVSWTALISGYVQKGLH 427

Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
                LF +M     +   ST   +L +     SL  GK +H + ++ G   N    + L
Sbjct: 428 GAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGL 487

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + MY  CG +  A  + + +   +  S WN +I A   NG  + AI  F  M  Q    P
Sbjct: 488 VDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAYADNGDGEAAIGAFTKMI-QSGLQP 545

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DSV+++ V+ AC +     +G               T    A+  +YG     K      
Sbjct: 546 DSVSILGVLIACSHCGFVEQG---------------TEFFQAMSPIYGITPKKKH----- 585

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
                     + CM+    +N     A +L   + FEP+EI   S+L+AC          
Sbjct: 586 ----------YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI-------- 627

Query: 590 QIHGHVFHLGFQENSFISSALLDMYS--NCKSNAAWSSMISAYGYHGKGWEAIELFHE-M 646
                     ++  S    A   ++S    +  AA+ SM + Y   GK WE +    + M
Sbjct: 628 ----------YKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGK-WENVRHVKKAM 676

Query: 647 CNSGIR 652
              GI+
Sbjct: 677 RERGIK 682



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 10/357 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF         +L  YS       +  LF E    D V++N +I++  +       L+ F
Sbjct: 274 GFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLF 333

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL--CNVFVNMYA 119
            EM   G    +     ++S    ++ L+ GR VHC +I A   ADS L   N  V+MYA
Sbjct: 334 REMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVA--TADSILHVGNSLVDMYA 391

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC   + +E  F  +    TVSW  ++SG +        L  F +M  +  +AD  + ++
Sbjct: 392 KCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFAT 451

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + ASA    L  GK +HA  I+ G  ++ +    + L+ MY++CG I+ A + F  M  
Sbjct: 452 VLKASAGFASLLLGKQLHAFIIRSGNLENVFSG--SGLVDMYAKCGSIKDAVQVFEEMPD 509

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ VSWNA+I  +A NG  E A     +M +   ++PD  +++ ++  C+    + +G  
Sbjct: 510 RNAVSWNALISAYADNGDGEAAIGAFTKM-IQSGLQPDSVSILGVLIACSHCGFVEQGTE 568

Query: 300 VHGYAIRRLLGYDLLMMNS--LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
               A+  + G      +   ++D   ++   ++AE L + +    D + W+S+++ 
Sbjct: 569 FF-QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624


>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
 gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
          Length = 571

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 173/570 (30%), Positives = 287/570 (50%), Gaps = 51/570 (8%)

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           VV W A+I G+A +G F  A     EM+    V PD  T V ++    D   L +GR +H
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEME-RNHVLPDKITYVAVLGAIQD---LEQGRRIH 56

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-------- 353
                     DL++ N+LM  Y+  +SL+ A  +F A+    D+VSW S+I+        
Sbjct: 57  VRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAM-DHRDVVSWTSIIAANARAGDF 115

Query: 354 ----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
               GLF+ M    ++ +  TLL +L  C+ P     G +IH      G  ++    NA+
Sbjct: 116 PAAMGLFRRMQLQGTRPNRITLLELLAWCDDPGE---GAAIHERAFASGLRSDVPVCNAI 172

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           ++M+   G    A  L +R+   +  S W  ++ A  + G   +A++ F+ M +     P
Sbjct: 173 LNMHAKAGRFETASELFERMPVRNAVS-WTAMMAAMVRAGRHDDALRLFRDM-EDDGVEP 230

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           DS+  + VI+AC +   A   + +HG  ++     DT V NA+I  Y RC  +K A   F
Sbjct: 231 DSIAFITVINACSS---AATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTF 287

Query: 530 -ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
            E     +  +W  MISAF++     R ++LFR +  E    NE++++++++AC     +
Sbjct: 288 VEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAI 347

Query: 586 RHGKQIHGHVFHLGFQ---ENSFISSALLDMYSNCKS---------------NAAWSSMI 627
           + G+ +H  V  +G+Q    +S +++ALLDMY  C S                 +W+S+I
Sbjct: 348 KEGRWVHDCV--IGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSII 405

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD- 686
           +A   +G G  A  LF  M   G+RP   + +S+++ACSH+G+VD G ++   + +++  
Sbjct: 406 AATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKEFVTRLRKDHRE 465

Query: 687 -VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
            +    EH  CIVD+L R+G+L+EA   I ++P +P P VW A L+ C  + D   G++ 
Sbjct: 466 GIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKTYEDISRGQRA 525

Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKD 775
           A  +  L+ +     I+LS+ Y A  R  D
Sbjct: 526 AAQILGLDEKTTAAVIALSSTYAASDRRGD 555



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 213/472 (45%), Gaps = 33/472 (6%)

Query: 38  VVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHC 97
           VV W AMIT   ++      + FF EM    +  D  T + ++ A+     L+QGR +H 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQD---LEQGRRIHV 57

Query: 98  LSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
              + G   D  + N  + MYA C  L  +   F  M   D VSW +I++          
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +  FR M   G + + ++L   +A     GE   G  IH      G      V V N++
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELLAWCDDPGE---GAAIHERAFASGLRSD--VPVCNAI 172

Query: 218 ISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           ++M+++ G  E A   F  M  ++ VSW A++      G+ ++A  L  +M+    VEPD
Sbjct: 173 LNMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDME-DDGVEPD 231

Query: 278 IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
               +T+I+ C+ +      R +HG  IR     D  + N+++  Y++  SL +A   F 
Sbjct: 232 SIAFITVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFV 288

Query: 338 AIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE 385
            I    D VSW +MIS             LF+EML    + +  TL+ ++ +C    +++
Sbjct: 289 EIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIK 348

Query: 386 FGKSIH----CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            G+ +H     +QL+    ++++   AL+ MY  CG L  A  +   +    D   W  +
Sbjct: 349 EGRWVHDCVIGYQLE---RSSSMVATALLDMYGKCGSLEVAARIFGEL-EQPDVVSWTSI 404

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           I A  QNG    A + F +M Q +   P  VT V+V++AC +  +   GK  
Sbjct: 405 IAATAQNGDGSSAARLFCAM-QLEGVRPVDVTFVSVVAACSHAGMVDLGKEF 455



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 126/532 (23%), Positives = 232/532 (43%), Gaps = 60/532 (11%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   L  + +L+  Y+  S    +  +F    ++DVV+W ++I A          +  F
Sbjct: 63  GYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMGLF 122

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  +G R +  TLL +   L   +   +G  +H  +  +G+ +D  +CN  +NM+AK 
Sbjct: 123 RRMQLQGTRPNRITLLEL---LAWCDDPGEGAAIHERAFASGLRSDVPVCNAILNMHAKA 179

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G   ++   F  M   + VSW  +M+  +     +  L  FR+M   G + D+++  + +
Sbjct: 180 GRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVI 239

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
             +AC    +  + IH   I+ G +     +V+N++I  Y++CG ++ A R F  +   +
Sbjct: 240 --NAC-SSAATARWIHGCIIRGGCDSD--TAVSNAIIRAYARCGSLKEAYRTFVEIKERR 294

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D VSW  +I  FA  G+ +    L  EM L+  V  +  T++T+++ CA +  ++EGR V
Sbjct: 295 DHVSWTTMISAFAEFGRIKRCVQLFREM-LLEGVRANEVTLITVVNACAGASAIKEGRWV 353

Query: 301 HGYAIRRLLGYDL-----LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           H   I    GY L     ++  +L+D Y K  SL  A  +F  +    D+VSW S+I+  
Sbjct: 354 HDCVI----GYQLERSSSMVATALLDMYGKCGSLEVAARIFGEL-EQPDVVSWTSIIAAT 408

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-------HCWQLK 396
                      LF  M     +    T ++++ +C+    ++ GK         H   ++
Sbjct: 409 AQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKEFVTRLRKDHREGIE 468

Query: 397 LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIK 456
           L   +       ++ +    G L  A  ++  +      + W   +  C          K
Sbjct: 469 LTLEH----CGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGC----------K 514

Query: 457 TFKSMTQQQNASP-----DSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
           T++ +++ Q A+      D  T   VI+       A   +   G AL+ LM 
Sbjct: 515 TYEDISRGQRAAAQILGLDEKTTAAVIALSST--YAASDRRGDGEALRGLMA 564


>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
 gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
          Length = 495

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 254/485 (52%), Gaps = 33/485 (6%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
           NSL++ Y K   + +A   F ++   N ++SW++M++             LF++M     
Sbjct: 14  NSLLNMYGKCGGVEEAREFFESMTHRN-VISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           + +  T L++L +C + E++E G+ IH    +       I   AL+ MY  C  L+ A  
Sbjct: 73  EPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQ 132

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   I    D   W+ +I A  Q GH +EAI+ F  M       P+ + L++++ AC + 
Sbjct: 133 VFDGIVEK-DVVTWSTMISAYAQLGHVREAIQLFGYMNLD-GVRPNEIILMSILGACSSA 190

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               EGK  H L +    G D    N LI MYG+C D+ SA  VF      +L +W+ M+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +  +++     A   FR ++ E   P+ ++ VS+L AC+ LG L  G  IH  +   GFQ
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQ 310

Query: 602 ENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEM 646
              +I ++L+DMY  C S  A               W++MI+A   H +G EA+ELF EM
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
             +G++P + + +S++ +CSHSGLV+EG  Y+  M+E+    P  EH V ++D+LGRSGK
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGK 430

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L EA E ++ +P++P    W  +LSAC  H DT+   +VA  +  L P + G Y+S SN+
Sbjct: 431 LNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFSNI 490

Query: 767 YVALG 771
               G
Sbjct: 491 LSGKG 495



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 240/476 (50%), Gaps = 51/476 (10%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V NSL++MY +CG +E A   F  MT ++V+SW+ ++  +A  G  ++A  L  +M+   
Sbjct: 12  VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKME-EE 70

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            VEP+  T ++++  CA++  + +G  +H  A R+ L   L++  +L+  Y K + L +A
Sbjct: 71  GVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEA 130

Query: 333 ELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNS 380
             +F+ I    D+V+W++MIS     G  +E + L    +          L++IL +C+S
Sbjct: 131 RQVFDGIVE-KDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSS 189

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +L  GK  H   +  GF  +    N L+ MY  CGDL +A ++   +    D   W+ 
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR-DLISWSA 248

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH----GL 496
           ++    ++GH ++A   F+ M   +   PD VT V+++ AC  L    EG  +H      
Sbjct: 249 MLAVIAEHGHCKDAFVHFRRM-DLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAE 307

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +S+M     ++N+LI MYG+C  +++A  +F+   + N+ TW  MI+A  Q++    A
Sbjct: 308 GFQSVM----YIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEA 363

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           LELF  +E    +P++++ +SI+ +C+  G++  G+     ++ L   E+   +  +   
Sbjct: 364 LELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGR-----IYFLKMVEDQSFTPGV--- 415

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSACS 666
                    +  M+   G  GK  EA EL   M      P +  V+   +LLSAC 
Sbjct: 416 -------EHFVGMLDLLGRSGKLNEAEELMEFM------PVEPGVVGWNTLLSACK 458



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 226/491 (46%), Gaps = 30/491 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL  Y      E +   F    +++V++W+ M+ A  +       L  F +M EEG+  
Sbjct: 15  SLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEP 74

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T L ++ A      ++QG ++H L+ +  +     +    V MY KC  L  +   F
Sbjct: 75  NEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQVF 134

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+   D V+W+T++S      +  + +  F  M   G + + + L S + A +  G L+
Sbjct: 135 DGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALA 194

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK+ H L +  G+     VS  N+LI MY +CGD+ +A+  F GM  +D++SW+A++  
Sbjct: 195 EGKMTHELVVICGF--GADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAV 252

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A +G  ++AF     M L   V+PD  T V+L+  C+    L EG  +H     R  G+
Sbjct: 253 IAEHGHCKDAFVHFRRMDL-EGVKPDYVTFVSLLDACSLLGALVEGNVIHTRI--RAEGF 309

Query: 312 DLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             +M   NSL+D Y K  SL  A  +F+ ++  N +++W +MI+             LF+
Sbjct: 310 QSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRN-VITWTTMITACVQHEQGKEALELFE 368

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL----GFSNNTIGVNALMHMY 413
           EM     Q      L+I+ SC+    +E G+    + LK+     F+        ++ + 
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGR---IYFLKMVEDQSFTPGVEHFVGMLDLL 425

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDS 471
              G L  A  L++ +        WN ++ AC  +   + A +    M      +A P  
Sbjct: 426 GRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGP-Y 484

Query: 472 VTLVNVISACG 482
           V+  N++S  G
Sbjct: 485 VSFSNILSGKG 495



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 10/351 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   T+L+  Y   S    +  +F     KDVVTW+ MI+A  +   V   +  FG M  
Sbjct: 111 LIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNL 170

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +G+R +   L+ I+ A +    L +G++ H L +  G  AD S  N  + MY KCGDL S
Sbjct: 171 DGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLAS 230

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           ++  F GM   D +SW+ +++    + + +   ++FR M   G + D V+  S + A + 
Sbjct: 231 AKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSL 290

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LG L  G VIH      G++   Y+   NSLI MY +CG ++AA   F  M+ ++V++W 
Sbjct: 291 LGALVEGNVIHTRIRAEGFQSVMYIE--NSLIDMYGKCGSLQAARGIFDRMSHRNVITWT 348

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I     + + +EA +L  EM+    V+PD    +++I  C+ S L+ EGR    Y ++
Sbjct: 349 TMITACVQHEQGKEALELFEEME-KAGVQPDQVAFLSIIHSCSHSGLVEEGRI---YFLK 404

Query: 307 RL----LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +        +     ++D   +S  L++AE L   +     +V WN+++S
Sbjct: 405 MVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLS 455



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 22/460 (4%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +NMY KCG +  +   F  M   + +SW+T+++        ++ L+ F++M   G +
Sbjct: 14  NSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVE 73

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S + A A    +  G++IH L  +   +    + V  +L+ MY +C  +  A 
Sbjct: 74  PNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVG--LIVGTALVGMYGKCSRLIEAR 131

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           + F G+  KDVV+W+ +I  +A  G   EA  L   M L   V P+   +++++  C+ +
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNL-DGVRPNEIILMSILGACSSA 190

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L EG+  H   +    G D+   N+L+  Y K   L+ A+ +F  +    DL+SW++M
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGM-ERRDLISWSAM 249

Query: 352 ISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           ++ +            F+ M     +  + T +++L +C+   +L  G  IH      GF
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGF 309

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +     N+L+ MY  CG L AA  +  R+SH  +   W  +I AC Q+   +EA++ F+
Sbjct: 310 QSVMYIENSLIDMYGKCGSLQAARGIFDRMSHR-NVITWTTMITACVQHEQGKEALELFE 368

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYG 517
            M ++    PD V  +++I +C +  L  EG+ ++ L +         V++   ++ + G
Sbjct: 369 EM-EKAGVQPDQVAFLSIIHSCSHSGLVEEGR-IYFLKMVEDQSFTPGVEHFVGMLDLLG 426

Query: 518 RCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRA 556
           R   +  A  + E       +  WN ++SA   +    RA
Sbjct: 427 RSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERA 466



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%), Gaps = 20/251 (7%)

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V N+L+ MYG+C  ++ A   FES  + N+ +W+ M++A++Q     +AL LF+ +E   
Sbjct: 12  VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            EPNE++ +S+L AC     +  G+ IH             + +AL+ MY  C       
Sbjct: 72  VEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEAR 131

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K    WS+MISAY   G   EAI+LF  M   G+RP +  ++S+L ACS +G
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
            + EG +  + ++       +      ++ M G+ G L  A      +  +     W AM
Sbjct: 192 ALAEG-KMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLIS-WSAM 249

Query: 730 LSACSHHGDTK 740
           L+  + HG  K
Sbjct: 250 LAVIAEHGHCK 260



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A + T  +L+  Y       S+ A+F     +D+++W+AM+    E+         F
Sbjct: 207 GFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHF 266

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D  T + ++ A + +  L +G V+H      G  +   + N  ++MY KC
Sbjct: 267 RRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKC 326

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F  M   + ++W T+++ C+ +   ++ L  F EM  +G Q D V+  S +
Sbjct: 327 GSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSII 386

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
            + +  G +  G+ I+ L +      +P V     ++ +  + G +  AE     M  + 
Sbjct: 387 HSCSHSGLVEEGR-IYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEP 445

Query: 241 DVVSWNAII 249
            VV WN ++
Sbjct: 446 GVVGWNTLL 454


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 305/630 (48%), Gaps = 46/630 (7%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSV--TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           L  G+V  A  +   Y++ P+ +   TN++IS + + GD+ +A   F  M  + VV+W  
Sbjct: 59  LRRGQVSAARKV---YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTI 115

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++  +A N  F+EAF L  +M    S   PD  T  TL+  C D++       VH +A++
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175

Query: 307 RLLGYD----LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
             LG+D    L + N L+  Y +   L  A +LF  I P  D V++N++I+G  K+ LY 
Sbjct: 176 --LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI-PEKDSVTFNTLITGYEKDGLYT 232

Query: 363 CS------------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM 410
            S            Q S  T   +L +         G+ +H   +  GFS +    N ++
Sbjct: 233 ESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQIL 292

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
             Y     ++    L   +    D   +N+VI + +Q   ++ ++  F+ M Q       
Sbjct: 293 DFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRR 350

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           +     ++S   NL     G+ LH  AL +       V N+L+ MY +C   + A  +F+
Sbjct: 351 NFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFK 410

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRH 587
           S       +W  +IS + Q       L+LF   R      ++ +  ++L A      L  
Sbjct: 411 SLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLL 470

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
           GKQ+H  +   G  EN F  S L+DMY+ C               ++  +W+++ISA+  
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHAD 530

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G G  AI  F +M  SG++P   S++ +L+ACSH G V++G +Y+  M   Y + P+ +
Sbjct: 531 NGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
           H+ C++D+LGR+G+  EA + +  +P +P   +W ++L+AC  H +  + ++ AE LF +
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650

Query: 753 EP-ENVGYYISLSNMYVALGRWKDAVEIGK 781
           E   +   Y+S+SN+Y A G W+   ++ K
Sbjct: 651 EKLRDAAAYVSMSNIYAAAGEWEKVRDVKK 680



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 277/602 (46%), Gaps = 50/602 (8%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTI 145
           + L++G+V     +   M   +++  N  ++ + K GD++S+   F  M     V+W  +
Sbjct: 57  DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAA-SACLGELSYGKVIHALGIK 202
           M     N++ ++    FR+M  S      D+V+ ++ +   +  + + + G+V HA  +K
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV-HAFAVK 175

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
           LG++ +P+++V+N L+  Y +   ++ A   F  +  KD V++N +I G+  +G + E+ 
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDF 322
            L  +M+     +P   T   ++           G+ +H  ++      D  + N ++DF
Sbjct: 236 HLFLKMR-QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDF 294

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YLCSQFS 367
           YSK + + +  +LF+ + P  D VS+N +IS              F+EM    +    F 
Sbjct: 295 YSKHDRVLETRMLFDEM-PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP 353

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLL 426
           F+T+L+I  + +   SL+ G+ +HC  L L  +++ + V N+L+ MY  C     A  + 
Sbjct: 354 FATMLSIAANLS---SLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAELIF 409

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
           + +   + T  W  +I    Q G     +K F  M +  N   D  T   V+ A  +   
Sbjct: 410 KSLPQRT-TVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFAS 467

Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
              GK LH   ++S    +    + L+ MY +C  IK A  VFE   + N  +WN +ISA
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527

Query: 547 FSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
            + N   +A + A         +P+ +SI+ +L+AC+  G +  G +         FQ  
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY--------FQ-- 577

Query: 604 SFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                A+  +Y        ++ M+   G +G+  EA +L  EM      P +    S+L+
Sbjct: 578 -----AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWSSVLN 629

Query: 664 AC 665
           AC
Sbjct: 630 AC 631



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 221/495 (44%), Gaps = 21/495 (4%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  S  LL +Y  V   + +  LF E   KD VT+N +IT   ++      +H F +M +
Sbjct: 184 LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
            G +    T   ++ A+  ++    G+ +H LS+  G   D+S+ N  ++ Y+K   +  
Sbjct: 244 SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE 303

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D VS+N ++S     +  E  L +FREM   G    N   ++ ++ +A 
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           L  L  G+ +H   + L   DS  + V NSL+ MY++C   E AE  F  +  +  VSW 
Sbjct: 364 LSSLQMGRQLHCQAL-LATADS-ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWT 421

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           A+I G+   G       L  +M+   ++  D +T  T++   A    L  G+ +H + IR
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMR-GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------G 354
                ++   + L+D Y+K  S+  A  +F  + P  + VSWN++IS            G
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM-PDRNAVSWNALISAHADNGDGEAAIG 539

Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMY 413
            F +M+    Q    ++L +L +C+    +E G           G +        ++ + 
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQE-AIKTFKSMTQQQNASPD 470
              G    A  L+  +    D   W+ V+ AC   +N    E A +   SM + ++A+  
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAA- 658

Query: 471 SVTLVNVISACGNLE 485
            V++ N+ +A G  E
Sbjct: 659 YVSMSNIYAAAGEWE 673



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 169/357 (47%), Gaps = 10/357 (2%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF         +L  YS       +  LF E    D V++N +I++  +       LHFF
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL--CNVFVNMYA 119
            EM   G    +     ++S    ++ L+ GR +HC ++ A   ADS L   N  V+MYA
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA--TADSILHVGNSLVDMYA 397

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC     +E  F  +    TVSW  ++SG +        L  F +M  S  +AD  + ++
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + ASA    L  GK +HA  I+ G  ++ +    + L+ MY++CG I+ A + F  M  
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSG--SGLVDMYAKCGSIKDAVQVFEEMPD 515

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           ++ VSWNA+I   A NG  E A     +M +   ++PD  +++ +++ C+    + +G +
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTACSHCGFVEQG-T 573

Query: 300 VHGYAIRRLLGYDLLMMNS--LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            +  A+  + G      +   ++D   ++   ++AE L + +    D + W+S+++ 
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 174/589 (29%), Positives = 290/589 (49%), Gaps = 44/589 (7%)

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
           +YS    +  + R F  +     ++W ++I  +  +G   ++      M L   + PD  
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGM-LASGLYPDHN 109

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK-------A 332
              +++  CA  + L  G S+HGY IR  L +DL   N+LM+ YSK   L K       A
Sbjct: 110 VFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGA 169

Query: 333 ELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE----SLEFGK 388
             + + +      V   S++ G     +     F++        SC S E     LE   
Sbjct: 170 SQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDV------SCRSREFEAQVLEIDY 223

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
                  ++   N    +  + H  ++   +   F ++       D   WN +I    +N
Sbjct: 224 KPRSEYREMEACNLGQQIKDISHS-MSVDSVRKIFEMMP----EKDLVSWNTIIAGNARN 278

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFEGKSLHGLALKSLMGLDTR 507
           G + E +   + M    N  PDS TL +V+     N++++ +GK +HG +++  +  +  
Sbjct: 279 GLYGETLTMVREMGGA-NLKPDSFTLSSVLPLIAENVDIS-KGKEIHGCSIRQGLDAEVY 336

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---E 564
           V ++LI MY +C  +  +  VF      +  +WN +I+   QN      L+ FR +   +
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAK 396

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            +P   S  SI+ AC  L  L  GKQ+HG++   GF EN FI+S+L+DMY+ C       
Sbjct: 397 IKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAR 456

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   +   +W++MI     HG   +AIELF +M   GI P   + +++L+ACSH+G
Sbjct: 457 QIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAG 516

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LVDE  +Y+N+M  ++ + P  EH+  + D+LGR+G+L+EAY+FI  +PI P   VW  +
Sbjct: 517 LVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATL 576

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
           LSAC  H +  M ++VA  + +++P+N G YI L+N+Y A  RWK+A +
Sbjct: 577 LSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAK 625



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 150/274 (54%), Gaps = 3/274 (1%)

Query: 24  ESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL 83
           +S   +F     KD+V+WN +I     N      L    EM    ++ DS TL  ++  +
Sbjct: 251 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLI 310

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
            +   + +G+ +H  SI+ G+ A+  + +  ++MYAKC  +  S   F+ +   D +SWN
Sbjct: 311 AENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWN 370

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           +I++GC+ N   ++ L +FR+M  +  +  + S SS + A A L  L  GK +H    + 
Sbjct: 371 SIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 430

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G++++ +++  +SL+ MY++CG+I  A + F  M  +D+VSW A+I G AL+G   +A +
Sbjct: 431 GFDENIFIA--SSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIE 488

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           L  +M+    +EP+    + +++ C+ + L+ E 
Sbjct: 489 LFEQMK-TEGIEPNYVAFMAVLTACSHAGLVDEA 521



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 220/494 (44%), Gaps = 44/494 (8%)

Query: 17  YSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTL 76
           YS+++    SL LF        + W ++I     +      L  F  M+  G+  D    
Sbjct: 52  YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111

Query: 77  LIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS-ECTFSGMH 135
             ++ A   +  L  G  +H   I+ G+  D    N  +NMY+K   L  S         
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQ 171

Query: 136 CADTVSWNT---IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS-SAVAASACLGELS 191
             D ++  T     +  L  N   K          S  +A N  +S  +    A + E+ 
Sbjct: 172 VLDEMTERTRSVRTASVLVGNQGRKV---------SDIEAFNYDVSCRSREFEAQVLEID 222

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           Y         +  Y +    ++   +  + S    +++  + F  M  KD+VSWN II G
Sbjct: 223 YKP-------RSEYREMEACNLGQQIKDI-SHSMSVDSVRKIFEMMPEKDLVSWNTIIAG 274

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A NG + E   ++ EM    +++PD  T+ +++ L A+++ + +G+ +HG +IR+ L  
Sbjct: 275 NARNGLYGETLTMVREMGGA-NLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDA 333

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ- 365
           ++ + +SL+D Y+K   +  +  +F  +    D +SWNS+I+     GLF E L    Q 
Sbjct: 334 EVYVASSLIDMYAKCTRVVDSYRVFTLLTE-RDGISWNSIIAGCVQNGLFDEGLKFFRQM 392

Query: 366 ---------FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                    +SFS+   I+P+C    +L  GK +H +  + GF  N    ++L+ MY  C
Sbjct: 393 LMAKIKPKSYSFSS---IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC 449

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G++  A  +  R+    D   W  +I+ C  +GH  +AI+ F+ M + +   P+ V  + 
Sbjct: 450 GNIRTARQIFDRMRLR-DMVSWTAMIMGCALHGHALDAIELFEQM-KTEGIEPNYVAFMA 507

Query: 477 VISACGNLELAFEG 490
           V++AC +  L  E 
Sbjct: 508 VLTACSHAGLVDEA 521



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 46/293 (15%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           +G  A +  ++SL+  Y+  +    S  +F     +D ++WN++I  CV+N     GL F
Sbjct: 329 QGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKF 388

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F +M+   I+  S +   I+ A   +  L  G+ +H    + G   +  + +  V+MYAK
Sbjct: 389 FRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAK 448

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG++ ++   F  M   D VSW  ++ GC  + +    +  F +M   G + + V+  + 
Sbjct: 449 CGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAV 508

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-- 238
           +  +AC                                   S  G ++ A + F  MT  
Sbjct: 509 L--TAC-----------------------------------SHAGLVDEAWKYFNSMTLD 531

Query: 239 ---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
                 V  + A+ D     G+ EEA+D +  M     + P  +   TL+S C
Sbjct: 532 FGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGM----PIGPTGSVWATLLSAC 580



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 85/397 (21%), Positives = 154/397 (38%), Gaps = 55/397 (13%)

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           H      W  VI   T +G   +++ +F  M       PD     +V+ AC  L     G
Sbjct: 69  HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLAS-GLYPDHNVFPSVLKACAMLMDLNLG 127

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS-------ASTVFESCYNCNLCTWNCM 543
           +SLHG  ++  +  D    NAL+ MY + R +K        AS V +             
Sbjct: 128 ESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTAS 187

Query: 544 ISAFSQNKAEVRALELF------RHLEFEPNEISI-VSILSACTQLGVLRHGKQIHGHVF 596
           +   +Q + +V  +E F      R  EFE   + I     S   ++     G+QI     
Sbjct: 188 VLVGNQGR-KVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISH 246

Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP--- 653
            +       I   + +     K   +W+++I+    +G   E + +  EM  + ++P   
Sbjct: 247 SMSVDSVRKIFEMMPE-----KDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSF 301

Query: 654 TKSSVISLLS------------ACSHSGLVDEGLQYYNNMLEEYD--VRPETEHHV---- 695
           T SSV+ L++             CS    +D  +   +++++ Y    R    + V    
Sbjct: 302 TLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLL 361

Query: 696 ---------CIVDMLGRSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGK 743
                     I+    ++G   E  +F + +    I+PK   + +++ AC+H     +GK
Sbjct: 362 TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGK 421

Query: 744 QVAELLFKLE-PENVGYYISLSNMYVALGRWKDAVEI 779
           Q+   + +    EN+    SL +MY   G  + A +I
Sbjct: 422 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQI 458



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 2/120 (1%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
           +Y+    L+ S   F+ +H    ++W +++     +  P K L  F  M  SG   D+  
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
             S + A A L +L+ G+ +H   I++G +   Y    N+L++MYS+   ++ + R   G
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTG--NALMNMYSKLRFLKKSGRQRLG 168


>gi|302819410|ref|XP_002991375.1| hypothetical protein SELMODRAFT_133508 [Selaginella moellendorffii]
 gi|300140768|gb|EFJ07487.1| hypothetical protein SELMODRAFT_133508 [Selaginella moellendorffii]
          Length = 652

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 304/627 (48%), Gaps = 53/627 (8%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L+ GK +H+   +LG +    ++   +++ MY +CG I  A + F  +  +DV+ W A+I
Sbjct: 27  LAQGKFLHSQAARLGLDRDELLA--KNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMI 84

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG-YAIRRL 308
             +A NG F++   LL  M L+  V P+    +T+++    +  + E RS+H   A+   
Sbjct: 85  TAYARNGDFQQGMALLRAM-LLDGVAPN---KITILAALGTTDCVVESRSIHRILAVESG 140

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L +D+ +  +++  Y +  SL  A   F  + P+ ++V+W+  ++G            +F
Sbjct: 141 LEWDVSVGTAIVSMYCRCGSLEDAIDHFEQM-PVKNVVTWSVAMAGCKELHRPELGLEIF 199

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI----HCWQLKLGFSNNTIGVNALMHM 412
           + ML   +     TL+ +L  C+S E +  G  I       +       N I   AL+++
Sbjct: 200 RGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIETNVIVGTALVNL 259

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ---QNASP 469
           Y   GDL  A  +  R+  N +   W  +I A       ++A++ F+ M  +    NA P
Sbjct: 260 YAKAGDLERACGVFSRMK-NRNVVTWTALITAHCCCDRDEQALEIFRQMQLEGVRPNAVP 318

Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
           ++VTL NV+   G       GK LHG+ + S + +D  V  AL+ +Y R +  +    VF
Sbjct: 319 NAVTLANVLYVLG----LDRGKLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVF 374

Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLR 586
                    +W  MI+ F+QN     AL L+R +  E +     +  +IL AC+ L  L 
Sbjct: 375 LEMEEHTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALP 434

Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKS------------------NAAWSSMIS 628
             + IH  V   GF  N  +S+ L+  Y  C +                   + WSSMI+
Sbjct: 435 EVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIA 494

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
               HG   EA+ +FH M   G R    +++ +L+ACSH G+  + ++++ +M+ +Y V 
Sbjct: 495 TSARHGCAAEAVAIFHRMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDYKVG 554

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
              +H  C+ D+LGR+G+L++A E I+ +P +    VW  +L AC  HGD    K+ ++ 
Sbjct: 555 RTGDHCSCMADLLGRNGRLEDAEELIRKMPFEAAASVWMTLLGACRTHGDLPRAKEASDQ 614

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKD 775
           +  + PE+   YI LSN+Y   G  +D
Sbjct: 615 VSGINPEHAQSYIVLSNVYAESGTKQD 641



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 264/580 (45%), Gaps = 57/580 (9%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           ++DV+ W AMITA   N     G+     M+ +G+  +  T+L   +AL   +C+ + R 
Sbjct: 74  DRDVILWTAMITAYARNGDFQQGMALLRAMLLDGVAPNKITIL---AALGTTDCVVESRS 130

Query: 95  VH-CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
           +H  L++++G+  D S+    V+MY +CG L  +   F  M   + V+W+  M+GC   +
Sbjct: 131 IHRILAVESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELH 190

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVA-ASACLGELSYGKVIHA--LGIKLGYEDSPY 210
            PE  L  FR M   G   D ++L + +   S+C   +  G+++    LG + G E    
Sbjct: 191 RPELGLEIFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLG-RFGEEIETN 249

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V V  +L+++Y++ GD+E A   F  M  ++VV+W A+I       + E+A ++  +MQL
Sbjct: 250 VIVGTALVNLYAKAGDLERACGVFSRMKNRNVVTWTALITAHCCCDRDEQALEIFRQMQL 309

Query: 271 MRSVEPD-IATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
              V P+ +   VTL ++    L L  G+ +HG  +   +  D+ +  +LM+ Y++S   
Sbjct: 310 -EGVRPNAVPNAVTLANVLY-VLGLDRGKLLHGVMVDSGVAVDVGVGTALMNLYARSKLP 367

Query: 330 SKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPS 377
                +F  +   +  VSW +MI+            GL++ M     +    T   IL +
Sbjct: 368 EHGHRVFLEMEE-HTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLA 426

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS--DT 435
           C+S  +L   +SIH    + GF  N      LM  Y  CG L  A  +    S  +  +T
Sbjct: 427 CSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNT 486

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S W+ +I    ++G   EA+  F  M QQ+ A  D VTL+ V++AC            HG
Sbjct: 487 SRWSSMIATSARHGCAAEAVAIFHRM-QQEGARADDVTLLCVLAACS-----------HG 534

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
                  G+  +     ++M     D K   T  + C        +CM     +N     
Sbjct: 535 -------GMTAKAVEFFVSMI---HDYKVGRT-GDHC--------SCMADLLGRNGRLED 575

Query: 556 ALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           A EL R + FE      +++L AC   G L   K+    V
Sbjct: 576 AEELIRKMPFEAAASVWMTLLGACRTHGDLPRAKEASDQV 615



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 141/663 (21%), Positives = 288/663 (43%), Gaps = 86/663 (12%)

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           + L QG+ +H  + + G+  D  L    V+MY +CG +  +   F  +H  D + W  ++
Sbjct: 25  DALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMI 84

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA-LGIKLGY 205
           +    N   ++ +   R M   G   + +++ +A+  + C+ E    + IH  L ++ G 
Sbjct: 85  TAYARNGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVE---SRSIHRILAVESGL 141

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           E    VSV  +++SMY +CG +E A   F  M  K+VV+W+  + G     + E   ++ 
Sbjct: 142 EWD--VSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIF 199

Query: 266 HEMQLMRSVEPDIATVVTLISLCA-------------DSLLLREGRSVHGYAIRRLLGYD 312
             M L+     D  T+VTL+ LC+             D  L R G  +           +
Sbjct: 200 RGM-LLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIE---------TN 249

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           +++  +L++ Y+K+  L +A  +F+ +   N +V+W ++I+             +F++M 
Sbjct: 250 VIVGTALVNLYAKAGDLERACGVFSRMKNRN-VVTWTALITAHCCCDRDEQALEIFRQMQ 308

Query: 361 Y-------LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
                   + +  + + +L +L        L+ GK +H   +  G + +     ALM++Y
Sbjct: 309 LEGVRPNAVPNAVTLANVLYVL-------GLDRGKLLHGVMVDSGVAVDVGVGTALMNLY 361

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
                      +   +  ++  S W  +I    QN    EA+  ++ M   +    D+ T
Sbjct: 362 ARSKLPEHGHRVFLEMEEHTTVS-WTAMIACFAQNSRNAEALGLYRRM-HLEGHRADAKT 419

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF---E 530
              ++ AC +L    E +S+H    +S   ++  V   L++ YG+C  ++ AS +F    
Sbjct: 420 FTTILLACSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSS 479

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRH 587
           S    N   W+ MI+  +++     A+ +F  ++ E    ++++++ +L+AC+  G+   
Sbjct: 480 STNPLNTSRWSSMIATSARHGCAAEAVAIFHRMQQEGARADDVTLLCVLAACSHGGMTAK 539

Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
             +              F+S  ++  Y   ++    S M    G +G+  +A EL  +M 
Sbjct: 540 AVEF-------------FVS--MIHDYKVGRTGDHCSCMADLLGRNGRLEDAEELIRKM- 583

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGK 706
                   S  ++LL AC   G +    +  + +     + PE  + ++ + ++   SG 
Sbjct: 584 --PFEAAASVWMTLLGACRTHGDLPRAKEASDQV---SGINPEHAQSYIVLSNVYAESGT 638

Query: 707 LQE 709
            Q+
Sbjct: 639 KQD 641



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 207/472 (43%), Gaps = 40/472 (8%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T++++ Y      E ++  F +   K+VVTW+  +  C E     +GL  F  M+ EG  
Sbjct: 149 TAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLLEGAA 208

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVV--------HCLSIKAGMIADSSLCNVFVNMYAKCG 122
            D  TL+ ++   +    +  G  +            I+  +I  ++L    VN+YAK G
Sbjct: 209 VDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIETNVIVGTAL----VNLYAKAG 264

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
           DL  +   FS M   + V+W  +++     +  E+ L  FR+M   G + + V  +  +A
Sbjct: 265 DLERACGVFSRMKNRNVVTWTALITAHCCCDRDEQALEIFRQMQLEGVRPNAVPNAVTLA 324

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
               +  L  GK++H + +  G   +  V V  +L+++Y++    E   R F  M     
Sbjct: 325 NVLYVLGLDRGKLLHGVMVDSGV--AVDVGVGTALMNLYARSKLPEHGHRVFLEMEEHTT 382

Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
           VSW A+I  FA N +  EA  L   M L      D  T  T++  C+  + L E RS+H 
Sbjct: 383 VSWTAMIACFAQNSRNAEALGLYRRMHL-EGHRADAKTFTTILLACSSLIALPEVRSIHS 441

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF---NAIAPMNDLVSWNSMIS------ 353
                    +  +  +LM  Y K  +L  A  +F   ++  P+N    W+SMI+      
Sbjct: 442 CVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLN-TSRWSSMIATSARHG 500

Query: 354 ------GLFKEMLYLCSQFSFSTLLAILPSCN----SPESLEFGKS-IHCWQLKLGFSNN 402
                  +F  M    ++    TLL +L +C+    + +++EF  S IH +  K+G + +
Sbjct: 501 CAAEAVAIFHRMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDY--KVGRTGD 558

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
               + +  +    G L  A  L++++   +  S W  ++ AC  +G    A
Sbjct: 559 H--CSCMADLLGRNGRLEDAEELIRKMPFEAAASVWMTLLGACRTHGDLPRA 608



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 145/297 (48%), Gaps = 28/297 (9%)

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           S ++L  GK +H    +LG   + +    ++HMY+ CG +  A  +   + H+ D   W 
Sbjct: 23  SADALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNL-HDRDVILWT 81

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG-LAL 498
            +I A  +NG FQ+ +   ++M      +P+ +T   +++A G  +   E +S+H  LA+
Sbjct: 82  AMITAYARNGDFQQGMALLRAML-LDGVAPNKIT---ILAALGTTDCVVESRSIHRILAV 137

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +S +  D  V  A+++MY RC  ++ A   FE     N+ TW+  ++   +       LE
Sbjct: 138 ESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLE 197

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE----NSFISSALL 611
           +FR +  E    ++I++V++L  C+    +  G +I    F   F E    N  + +AL+
Sbjct: 198 IFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIETNVIVGTALV 257

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           ++Y+                 ++   W+++I+A+    +  +A+E+F +M   G+RP
Sbjct: 258 NLYAKAGDLERACGVFSRMKNRNVVTWTALITAHCCCDRDEQALEIFRQMQLEGVRP 314



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 141/328 (42%), Gaps = 37/328 (11%)

Query: 474 LVNVISACGN---LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           L     ACG+    +   +GK LH  A +  +  D  +   ++ MY RC  I  A  VF+
Sbjct: 11  LARGFQACGDEGSADALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFD 70

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQ 590
           + ++ ++  W  MI+A+++N    + + L R +  +    + ++IL+A      +   + 
Sbjct: 71  NLHDRDVILWTAMITAYARNGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVESRS 130

Query: 591 IHGHV-FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
           IH  +    G + +  + +A++ MY  C               K+   WS  ++      
Sbjct: 131 IHRILAVESGLEWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELH 190

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSH-SGLVDEGLQYYNNMLEEYDVRPETEH 693
           +    +E+F  M   G    K ++++LL  CS    +V  G    ++ L  +    ET  
Sbjct: 191 RPELGLEIFRGMLLEGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIETNV 250

Query: 694 HV--CIVDMLGRSGKLQEA---YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
            V   +V++  ++G L+ A   +  +KN  +      W A+++A   H      +Q  E+
Sbjct: 251 IVGTALVNLYAKAGDLERACGVFSRMKNRNVV----TWTALITA---HCCCDRDEQALEI 303

Query: 749 LFKLE-----PENVGYYISLSNMYVALG 771
             +++     P  V   ++L+N+   LG
Sbjct: 304 FRQMQLEGVRPNAVPNAVTLANVLYVLG 331



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 3/185 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +   T+L+  Y+     E    +F E      V+W AMI    +N      L  +
Sbjct: 346 GVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEEHTTVSWTAMIACFAQNSRNAEALGLY 405

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG R D+ T   I+ A + +  L + R +H    ++G   + ++    ++ Y KC
Sbjct: 406 RRMHLEGHRADAKTFTTILLACSSLIALPEVRSIHSCVHESGFHINDAVSTTLMSAYGKC 465

Query: 122 GDLNSSECTF---SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           G L  +   F   S  +  +T  W+++++    +    + +  F  M   G +AD+V+L 
Sbjct: 466 GTLEDASRIFLHSSSTNPLNTSRWSSMIATSARHGCAAEAVAIFHRMQQEGARADDVTLL 525

Query: 179 SAVAA 183
             +AA
Sbjct: 526 CVLAA 530


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 266/534 (49%), Gaps = 69/534 (12%)

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------------L 355
           +L   N+++  YSK   LS+ + +FN + P  D VSWN  ISG                +
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFN-LMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
            K+     ++ +FST+L +   C+    ++ G+ I+   LK GF ++    + L+ MY  
Sbjct: 129 LKDAAMNLNRITFSTMLIL---CSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 416 CGDLVAAFSLLQRISHNS------------------------------DTSCWNIVIVAC 445
            G +  A      +   +                              D+  W I+I   
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245

Query: 446 TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD 505
            QNG  +EA+  F+ M +    + D  T  +V++ACG+L    EGK +H   +++    +
Sbjct: 246 MQNGLEREALDMFREM-RLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE- 564
             V +AL+ MY +CR IKSA TVF+     N+ +W  M+  + QN     A+++F  ++ 
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364

Query: 565 --FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
              EP++ ++ S++S+C  L  L  G Q H      G      +S+AL+ +Y  C     
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTEN 424

Query: 618 ----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
                     +   +W+++++ Y   GK  E I LF  M   G++P   + I +LSACS 
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWG 727
           +GLV++GLQY+ +M++E+ + P  +H  CI+D+LGR+G+L+EA  FI N+P  P    W 
Sbjct: 485 AGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWA 544

Query: 728 AMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +LS+C  HGD ++GK  A+ L  LEP+N   Y+ LS++Y + G+W    ++ +
Sbjct: 545 TLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRR 598



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/609 (23%), Positives = 269/609 (44%), Gaps = 88/609 (14%)

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           +Q +    ++ + A   LG L+Y   +        +   P +   N+++S+YS+ G +  
Sbjct: 36  KQPETFLSNNLITAYYKLGNLAYAHHV------FDHIPQPNLFSWNTILSVYSKLGLLSQ 89

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
            ++ F  M  +D VSWN  I G+A  G   +A  +   M    ++  +  T  T++ LC+
Sbjct: 90  MQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCS 149

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN------ 343
               +  GR ++G  ++   G D+ + + L+D Y+K   +  A+  F+ +   N      
Sbjct: 150 KFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNT 209

Query: 344 ------------------------DLVSWNSMISGL------------FKEML---YLCS 364
                                   D +SW  MI+GL            F+EM    +   
Sbjct: 210 MITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMD 269

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           QF+F +   +L +C S  +L  GK IH + ++    +N    +AL+ MY  C  + +A +
Sbjct: 270 QFTFGS---VLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAET 326

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           + +R+   +  S W  ++V   QNG  +EA+K F  M Q+    PD  TL +VIS+C NL
Sbjct: 327 VFKRMPQKNVIS-WTAMLVGYGQNGFSEEAVKIFFEM-QRNGVEPDDFTLGSVISSCANL 384

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               EG   H  AL S +     V NALIT+YG+C   +++  +F      +  +W  ++
Sbjct: 385 ASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALL 444

Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           + ++Q       + LF  +     +P+ ++ + +LSAC++ G++  G Q         + 
Sbjct: 445 AGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQ---------YF 495

Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI-- 659
           E+      ++ +  +C      + +I   G  G+  EA    + M      P    V+  
Sbjct: 496 ESMIKEHGIMPIVDHC------TCIIDLLGRAGRLEEARNFINNM------PCHPDVVGW 543

Query: 660 -SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IK 715
            +LLS+C   G ++ G    ++++      P +  +V +  +    GK  +  +    ++
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPAS--YVLLSSLYASKGKWDKVAQLRRGMR 601

Query: 716 NLPIQPKPG 724
           +  ++ +PG
Sbjct: 602 DKRVRKEPG 610



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 216/468 (46%), Gaps = 39/468 (8%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           N + +T++ M+  C + RCV +G    G++++ G   D      +V   T++  +   + 
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
                 +  ++    +CN  +    +CG +  S+  F G+   D++SW  +++G + N  
Sbjct: 195 YFDEMPERNVV----MCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGL 250

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             + L  FREM  +G   D  +  S + A   L  L  GK IHA  I+  ++D+ +V   
Sbjct: 251 EREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG-- 308

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           ++L+ MYS+C  I++AE  F  M  K+V+SW A++ G+  NG  EEA  +  EMQ    V
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ-RNGV 367

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           EPD  T+ ++IS CA+   L EG   H  A+   L   + + N+L+  Y K  S   +  
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427

Query: 335 LFNAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LF  +  + D VSW ++++            GLF+ ML    +    T + +L +C+   
Sbjct: 428 LFTEMN-IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC----------GDLVAAFSLLQRISHN 432
            +E G         L +  + I  + +M +  +C          G L  A + +  +  +
Sbjct: 487 LVEKG---------LQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCH 537

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            D   W  ++ +C  +G  +       S+   +  +P S  L++ + A
Sbjct: 538 PDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYA 585



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 165/347 (47%), Gaps = 12/347 (3%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +++T        E S  LF     +D ++W  MIT  ++N      L  F EM   G   
Sbjct: 209 TMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAM 268

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T   +++A   +  L +G+ +H   I+     +  + +  V+MY+KC  + S+E  F
Sbjct: 269 DQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVF 328

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             M   + +SW  ++ G   N + E+ +  F EM  +G + D+ +L S +++ A L  L 
Sbjct: 329 KRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLE 388

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G   H   +  G     +++V+N+LI++Y +CG  E + R F  M  +D VSW A++ G
Sbjct: 389 EGAQFHCRALVSGL--ISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAG 446

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHGYAIR 306
           +A  GK  E   L   M L   ++PD  T + ++S C+ + L+ +G       +  + I 
Sbjct: 447 YAQFGKANETIGLFERM-LAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIM 505

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            ++ +       ++D   ++  L +A    N +    D+V W +++S
Sbjct: 506 PIVDH----CTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 187/423 (44%), Gaps = 50/423 (11%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY---PEKCLLYFREMGWS 168
           N  +++Y+K G L+  +  F+ M   D VSWN  +SG  + NY    +   +Y   +  +
Sbjct: 75  NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISG--YANYGSCSDAVRVYKLMLKDA 132

Query: 169 GEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS---------------- 212
               + ++ S+ +   +    +  G+ I+   +K G+    +V                 
Sbjct: 133 AMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDA 192

Query: 213 -------------VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
                        + N++I+   +CG IE ++R F G+  +D +SW  +I G   NG   
Sbjct: 193 KRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLER 252

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           EA D+  EM+L      D  T  ++++ C   L L EG+ +H Y IR     ++ + ++L
Sbjct: 253 EALDMFREMRLA-GFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D YSK  S+  AE +F  + P  +++SW +M+ G            +F EM     +  
Sbjct: 312 VDMYSKCRSIKSAETVFKRM-PQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPD 370

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             TL +++ SC +  SLE G   HC  L  G  +     NAL+ +Y  CG    +  L  
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFT 430

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            ++   + S W  ++    Q G   E I  F+ M       PD VT + V+SAC    L 
Sbjct: 431 EMNIRDEVS-WTALLAGYAQFGKANETIGLFERML-AHGLKPDGVTFIGVLSACSRAGLV 488

Query: 488 FEG 490
            +G
Sbjct: 489 EKG 491



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 193/473 (40%), Gaps = 83/473 (17%)

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           ++L  C   ++    K +HC  LK      T   N L+  Y   G+L  A  +   I   
Sbjct: 10  SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69

Query: 433 S------------------------------DTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           +                              D   WN+ I      G   +A++ +K M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG----- 517
           +    + + +T   ++  C        G+ ++G  LK   G D  V + L+ MY      
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189

Query: 518 --------------------------RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
                                     RC  I+ +  +F      +  +W  MI+   QN 
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249

Query: 552 AEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
            E  AL++FR +    F  ++ +  S+L+AC  L  L  GKQIH +V     ++N F+ S
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309

Query: 609 ALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           AL+DMYS C+S                 +W++M+  YG +G   EA+++F EM  +G+ P
Sbjct: 310 ALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              ++ S++S+C++   ++EG Q++   L    +   T  +  ++ + G+ G  + ++  
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNA-LITLYGKCGSTENSHRL 428

Query: 714 IKNLPIQPKPGVWGAMLSACSHHG--DTKMGKQVAELLFKLEPENVGYYISLS 764
              + I+ +   W A+L+  +  G  +  +G     L   L+P+ V +   LS
Sbjct: 429 FTEMNIRDEVS-WTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 12/255 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           ++L+  YS     +S+  +F     K+V++W AM+    +N      +  F EM   G+ 
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  TL  ++S+   +  L++G   HC ++ +G+I+  ++ N  + +Y KCG   +S   
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ M+  D VSW  +++G        + +  F  M   G + D V+    ++A +  G +
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 191 SYG-----KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVS 244
             G      +I   GI       P V     +I +  + G +E A      M C  DVV 
Sbjct: 489 EKGLQYFESMIKEHGIM------PIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVG 542

Query: 245 WNAIIDGFALNGKFE 259
           W  ++    ++G  E
Sbjct: 543 WATLLSSCRVHGDME 557



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 2/150 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G ++ +  S +L+T Y      E+S  LF E   +D V+W A++    +       +  F
Sbjct: 401 GLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLF 460

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             M+  G++ D  T + ++SA ++   +++G +    +  + G++     C   +++  +
Sbjct: 461 ERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGR 520

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
            G L  +    + M C  D V W T++S C
Sbjct: 521 AGRLEEARNFINNMPCHPDVVGWATLLSSC 550


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 270/529 (51%), Gaps = 69/529 (13%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------------LFKEML 360
           N+++  YSKS  LS  + +F +I P  D VSWNS+ISG                + K+ +
Sbjct: 75  NTMLSAYSKSGDLSTMQEIF-SIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGV 133

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
              ++ +FST+L ++   +S   ++ G+ IH   +K GF       ++L+ MY   G + 
Sbjct: 134 LNLNRITFSTMLLLV---SSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVS 190

Query: 421 AAFSLL---------------------------QRISH---NSDTSCWNIVIVACTQNGH 450
            A  +                            +R+ H     D+  W  +I    QNG 
Sbjct: 191 VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
             EA+  F+ M +Q+  + D  T  +V++ACG L    EGK +H L ++S    +  V +
Sbjct: 251 EAEAMDLFRDM-RQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGS 309

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           AL+ MY +CR ++ A  VF+   N N+ +W  M+  + QN     A+ +F  ++    EP
Sbjct: 310 ALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEP 369

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
           ++ ++ S++S+C  L  L  G Q H      G      +S+AL+ +Y  C          
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLF 429

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                +   +W++++S Y   GK  E I+LF  M   G++P   + I++LSACS +GLV+
Sbjct: 430 DEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
            G QY+ +ML+++ + P ++H+ C++D+ GR+G+L+EA  FI  +P  P    W  +LS+
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSS 549

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           C  +G+ ++GK  AE L +L+P+N   YI LS++Y A G+W +  ++ +
Sbjct: 550 CRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRR 598



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 237/514 (46%), Gaps = 65/514 (12%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N+++S YS+ GD+   +  F  M  +D VSWN++I G+   G   EA    + M     +
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
             +  T  T++ L +    +  GR +HG  ++   G  + + +SL+D Y+K   +S A  
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 335 LFNAIAPMN------------------------------DLVSWNSMISG---------- 354
           +F+ +   N                              D +SW +MI+G          
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF++M          T  ++L +C    +L+ GK IH   ++ G+++N    +AL+ M
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y  C  +  A ++ +R++ N +   W  ++V   QNG  +EA++ F  M Q+    PD  
Sbjct: 315 YCKCRSVRYAEAVFKRMA-NKNVVSWTAMLVGYGQNGFSEEAVRVFCDM-QRNGIEPDDF 372

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           TL +VIS+C NL    EG   H  AL S +     V NALIT+YG+C  I+ ++ +F+  
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
              +  +W  ++S ++Q       ++LF  +     +P+ ++ +++LSAC++ G++  G+
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
           Q              +  S L D +     +  ++ MI  +G  G+  EA    ++M  S
Sbjct: 493 Q--------------YFESMLKD-HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFS 537

Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
              P      +LLS+C   G  + G     ++LE
Sbjct: 538 ---PDSIGWATLLSSCRLYGNEEIGKWAAESLLE 568



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 241/520 (46%), Gaps = 61/520 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI-- 69
           ++L+AYS      +   +F    N+D V+WN++I+  V    VV  +  +  M+++G+  
Sbjct: 76  TMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLN 135

Query: 70  --RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK------- 120
             R   +T+L++VS+     C+  GR +H   +K G  A   + +  V+MYAK       
Sbjct: 136 LNRITFSTMLLLVSS---QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 121 ------------------------CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
                                    G +  S+  F GM   D++SW T+++G + N    
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
           + +  FR+M   G   D  +  S + A   L  L  GK IH L I+ GY  + +V   ++
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG--SA 310

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           L+ MY +C  +  AE  F  M  K+VVSW A++ G+  NG  EEA  +  +MQ    +EP
Sbjct: 311 LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQ-RNGIEP 369

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D  T+ ++IS CA+   L EG   H  A+   L   + + N+L+  Y K  S+  +  LF
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLF 429

Query: 337 NAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
           + ++   D VSW +++SG            LF+ ML    +    T +A+L +C+    +
Sbjct: 430 DEMS-FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488

Query: 385 EFGKSIHCWQLK----LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
           E G+      LK    + FS++      ++ ++   G L  A + + ++  + D+  W  
Sbjct: 489 ERGQQYFESMLKDHGIIPFSDH---YTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWAT 545

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           ++ +C   G+ +      +S+ +    +P    L++ I A
Sbjct: 546 LLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYA 585



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 158/655 (24%), Positives = 267/655 (40%), Gaps = 103/655 (15%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVN-------------------------------MYA 119
           Q + +HCL IK+    ++ L N  +N                                Y+
Sbjct: 23  QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLS 178
           K GDL++ +  FS M   D VSWN+++SG + + +  E    Y   M       + ++ S
Sbjct: 83  KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA-------- 230
           + +   +  G +  G+ IH   +K G+    YV V +SL+ MY++ G +  A        
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGF--GAYVFVGSSLVDMYAKMGLVSVASQVFDEVQ 200

Query: 231 -----------------------ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
                                  +R F GM  +D +SW  +I G   NG   EA DL  +
Sbjct: 201 ERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRD 260

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+    +  D  T  ++++ C     L+EG+ +H   IR    +++ + ++L+D Y K  
Sbjct: 261 MR-QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAIL 375
           S+  AE +F  +A  N +VSW +M+ G            +F +M     +    TL +++
Sbjct: 320 SVRYAEAVFKRMANKN-VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVI 378

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            SC +  SLE G   HC  L  G  +     NAL+ +Y  CG +  +  L   +S   + 
Sbjct: 379 SSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV 438

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
           S W  ++    Q G   E I  F+ M   Q   PD+VT + V+SAC    L   G+    
Sbjct: 439 S-WTALVSGYAQFGKANETIDLFERML-VQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496

Query: 496 LALKS--LMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFS-QNK 551
             LK   ++         +I ++GR   ++ A        ++ +   W  ++S+      
Sbjct: 497 SMLKDHGIIPFSDHY-TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGN 555

Query: 552 AEVRALELFRHLEFEPNEISIVSILSAC-------TQLGVLRHGKQIHGHVFHLGFQENS 604
            E+        LE +P   +   +LS+        + +  LR G +  G     GF    
Sbjct: 556 EEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIK 615

Query: 605 FISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + S   +  +S    ++ +S  I A        E  +L H+M   G  P  SSV+
Sbjct: 616 YKSKVYI--FSADDQSSPFSDQIYA--------ELEKLNHKMIEEGYVPDASSVL 660



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 215/504 (42%), Gaps = 108/504 (21%)

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLG--------FSN----NTIGVNALMHMYINCGDLVA 421
           I+ S  +PE+  +   I+ +  KLG        F      N+   N ++  Y   GDL  
Sbjct: 31  IIKSLTNPETFLYNNLINAYS-KLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLST 89

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV---TLVNVI 478
              +   I  N D   WN +I      G   EA+KT+ SM +    + + +   T++ ++
Sbjct: 90  MQEIFS-IMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLV 148

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           S+ G ++L   G+ +HG  +K   G    V ++L+ MY +   +  AS VF+     N+ 
Sbjct: 149 SSQGCVDL---GRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVV 205

Query: 539 -------------------------------TWNCMISAFSQNKAEVRALELFRHLEFEP 567
                                          +W  MI+   QN  E  A++LFR +  E 
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEG 265

Query: 568 ---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS----- 619
              ++ +  S+L+AC  L  L+ GK+IH  +   G+  N F+ SAL+DMY  C+S     
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAE 325

Query: 620 ----------NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                       +W++M+  YG +G   EA+ +F +M  +GI P   ++ S++S+C++  
Sbjct: 326 AVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLA 385

Query: 670 LVDEGLQYY-------------------------------NNMLEEYDVRPETEHHVCIV 698
            ++EG Q++                               N + +E   R E      +V
Sbjct: 386 SLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVS-WTALV 444

Query: 699 DMLGRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHHGDTKMGKQVAELLFK---L 752
               + GK  E  +  + + +Q   P    + A+LSACS  G  + G+Q  E + K   +
Sbjct: 445 SGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGI 504

Query: 753 EPENVGYYISLSNMYVALGRWKDA 776
            P +  +Y  + +++   GR ++A
Sbjct: 505 IPFS-DHYTCMIDLFGRAGRLEEA 527



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 2/259 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++   ++L+  Y        + A+F    NK+VV+W AM+    +N      +  F
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF 359

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   GI  D  TL  ++S+   +  L++G   HC ++ +G+I+  ++ N  + +Y KC
Sbjct: 360 CDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKC 419

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  S   F  M   D VSW  ++SG        + +  F  M   G + D V+  + +
Sbjct: 420 GSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVL 479

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CK 240
           +A +  G +  G+      +K  +   P+      +I ++ + G +E A+     M    
Sbjct: 480 SACSRAGLVERGQQYFESMLK-DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSP 538

Query: 241 DVVSWNAIIDGFALNGKFE 259
           D + W  ++    L G  E
Sbjct: 539 DSIGWATLLSSCRLYGNEE 557


>gi|302796687|ref|XP_002980105.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
 gi|300152332|gb|EFJ18975.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
          Length = 696

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 184/683 (26%), Positives = 325/683 (47%), Gaps = 38/683 (5%)

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           EG++ D  TLL  VSA   +    QG+ +H   + +G+ A   L N  V MY KCG +  
Sbjct: 4   EGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   D +SWN +++    +   ++ +  +      G + D V+ +S + A   
Sbjct: 64  ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G+L +G+++H   +   +     V   N LISMYS CG ++ A   F      DV +W 
Sbjct: 124 SGDLKFGRLLHEHFLGTNFVSDQIV--CNGLISMYSDCGSLDDATAVFEWSFQPDVCTWT 181

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I  +  +GK E AF    +M     +  +  T +T++  C+   +L  G+ VH  A+ 
Sbjct: 182 TVIAAYTRHGKLECAFATWRKMH-QEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALG 240

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLY 361
             L + L M NSL+  Y K +SL  A  +F+ +    ++++W +M++G          +Y
Sbjct: 241 SGLDFSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIY 300

Query: 362 LCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           LC +           T   +L  C   E+L  G SIH +    G  +++   NAL++MY 
Sbjct: 301 LCREMMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYS 360

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
             G L  A  +      +  TS W  VI A  Q+G  +EA + +  +   +    D    
Sbjct: 361 KSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHL-DLEGMEVDENVF 419

Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVFESC 532
            +V+  C +   A + + +H   L S  GL+ R+   NA++T YG+      A  VF   
Sbjct: 420 ASVLGFCDS---ATQVRDVHSRILAS--GLEQRMVAANAVMTAYGKAGHPDEAREVFLGI 474

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIH 592
              ++ +W+ +I+A+ Q+   ++  EL      +PN  ++ S+L AC  +G    G++IH
Sbjct: 475 SRPSVISWSALIAAYGQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIH 534

Query: 593 GHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGW 637
             V    + +N+ + +A   +Y+ C               K   +W++++SAY   G   
Sbjct: 535 ALVLAGPYAQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFR 594

Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
           +AI L  +M   G  P   + I++L +CS SG +    +  ++M+ ++ + P  EH+VC+
Sbjct: 595 DAIFLSRQMQVEGFVPDDITFITILYSCSQSGQLAAACECLSSMVCDFGMVPAREHYVCL 654

Query: 698 VDMLGRSGKLQEAYEFIKNLPIQ 720
           +D+LGR+G++ +A E    +P +
Sbjct: 655 IDVLGRAGRVGDAVELKDCMPYE 677



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 274/600 (45%), Gaps = 27/600 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  A +  S SL+  Y      E +   F     +D+++WNAMIT   ++ C    +  +
Sbjct: 40  GLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLY 99

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                EG + D  T   +++A      LK GR++H   +    ++D  +CN  ++MY+ C
Sbjct: 100 AYSRLEGTKPDEVTFASLLNACFASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDC 159

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L+ +   F      D  +W T+++    +   E     +R+M   G +++ ++  + +
Sbjct: 160 GSLDDATAVFEWSFQPDVCTWTTVIAAYTRHGKLECAFATWRKMHQEGLRSNEITFLTVL 219

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
            A + L  L  GK +H L +  G + S  + + NSLISMY +C  +  A   F  M   +
Sbjct: 220 DACSSLEVLETGKHVHRLALGSGLDFS--LRMENSLISMYGKCSSLGDARDVFDRMRYRR 277

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +V++W A++ G A          L  EM ++  V P   T   L+  C     L  G S+
Sbjct: 278 NVITWTAMVAGHAQCEDLAGGIYLCREM-MLEGVRPQPVTFAGLLDGCRGREALAVGASI 336

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
           HGY     +  D  + N+L++ YSKS  L  A  +FN         SW S+I      GL
Sbjct: 337 HGYVRLGGMESDSAVNNALVNMYSKSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGL 396

Query: 356 FKEMLYLCSQFSF-------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
            +E   L             +   ++L  C+S   +   + +H   L  G     +  NA
Sbjct: 397 KREATELYHHLDLEGMEVDENVFASVLGFCDSATQV---RDVHSRILASGLEQRMVAANA 453

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           +M  Y   G    A  +   IS  S  S W+ +I A    G   EAIKTF+ M   +   
Sbjct: 454 VMTAYGKAGHPDEAREVFLGISRPSVIS-WSALIAA---YGQHWEAIKTFELMN-LEGVK 508

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P++ TL +V+ AC  +    +G+ +H L L      +T V NA  ++Y +C  +  AS V
Sbjct: 509 PNATTLTSVLRACATVGAHEQGRRIHALVLAGPYAQNTTVLNAAASLYAKCSRVADASRV 568

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F S    +  +WN ++SA+++      A+ L R ++ E   P++I+ ++IL +C+Q G L
Sbjct: 569 FSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSGQL 628



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 159/608 (26%), Positives = 276/608 (45%), Gaps = 52/608 (8%)

Query: 165 MGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC 224
           M   G Q D ++L +AV+A A LG+   GK IHA  +  G   S  V ++NSL+ MY +C
Sbjct: 1   MDLEGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGAS--VLLSNSLVYMYGKC 58

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           G +E A  AF  M  +D++SWNA+I  +A +   ++A   L+    +   +PD  T  +L
Sbjct: 59  GSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQ-LYAYSRLEGTKPDEVTFASL 117

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN-AIAPMN 343
           ++ C  S  L+ GR +H + +      D ++ N L+  YS   SL  A  +F  +  P  
Sbjct: 118 LNACFASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQP-- 175

Query: 344 DLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIH 391
           D+ +W ++I+   +     C+  ++             T L +L +C+S E LE GK +H
Sbjct: 176 DVCTWTTVIAAYTRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVH 235

Query: 392 CWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
              L  G   +    N+L+ MY  C  L  A  +  R+ +  +   W  ++    Q    
Sbjct: 236 RLALGSGLDFSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDL 295

Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
              I   + M   +   P  VT   ++  C   E    G S+HG      M  D+ V NA
Sbjct: 296 AGGIYLCREM-MLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNA 354

Query: 512 LITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEI 570
           L+ MY +   ++ A  VF +   +    +W  +I A+ Q+  +  A EL+ HL+ E  E+
Sbjct: 355 LVNMYSKSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEV 414

Query: 571 S---IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------- 617
                 S+L  C     +R    +H  +   G ++    ++A++  Y             
Sbjct: 415 DENVFASVLGFCDSATQVR---DVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVF 471

Query: 618 -----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                 S  +WS++I+AYG H   WEAI+ F  M   G++P  +++ S+L AC+  G  +
Sbjct: 472 LGISRPSVISWSALIAAYGQH---WEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 528

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCI---VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           +G + +  +L      P  ++   +     +  +  ++ +A     ++P +     W A+
Sbjct: 529 QGRRIHALVL----AGPYAQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVS-WNAI 583

Query: 730 LSACSHHG 737
           +SA +  G
Sbjct: 584 VSAYAKQG 591



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 264/572 (46%), Gaps = 69/572 (12%)

Query: 271 MRSVEPDIATVVTLISLCA---DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           +  V+ D  T++  +S CA   DSL   +G+ +H   +   LG  +L+ NSL+  Y K  
Sbjct: 3   LEGVQGDEITLLNAVSACAALGDSL---QGKQIHARILSSGLGASVLLSNSLVYMYGKCG 59

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMIS-------GLFKEMLYLCSQFSFS-----TLLAIL 375
           S+ +A   F+ + P  DL+SWN+MI+       G     LY  S+   +     T  ++L
Sbjct: 60  SVEEARNAFDRM-PERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLL 118

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
            +C +   L+FG+ +H   L   F ++ I  N L+ MY +CG L  A ++ +  S   D 
Sbjct: 119 NACFASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFE-WSFQPDV 177

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W  VI A T++G  + A  T++ M  Q+    + +T + V+ AC +LE+   GK +H 
Sbjct: 178 CTWTTVIAAYTRHGKLECAFATWRKM-HQEGLRSNEITFLTVLDACSSLEVLETGKHVHR 236

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISAFSQNKAEV 554
           LAL S +    R++N+LI+MYG+C  +  A  VF+   Y  N+ TW  M++  +Q +   
Sbjct: 237 LALGSGLDFSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLA 296

Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
             + L R +  E   P  ++   +L  C     L  G  IHG+V   G + +S +++AL+
Sbjct: 297 GGIYLCREMMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALV 356

Query: 612 DMYSNCK----------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +MYS                     ++W+S+I AY  HG   EA EL+H +   G+   +
Sbjct: 357 NMYSKSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDE 416

Query: 656 SSVISLLSACS--------HSGLVDEGLQYY----NNMLEEYD---------------VR 688
           +   S+L  C         HS ++  GL+      N ++  Y                 R
Sbjct: 417 NVFASVLGFCDSATQVRDVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVFLGISR 476

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV-AE 747
           P       ++   G+  +  + +E +    ++P      ++L AC+  G  + G+++ A 
Sbjct: 477 PSVISWSALIAAYGQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHAL 536

Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           +L     +N     + +++Y    R  DA  +
Sbjct: 537 VLAGPYAQNTTVLNAAASLYAKCSRVADASRV 568


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 162/465 (34%), Positives = 248/465 (53%), Gaps = 45/465 (9%)

Query: 355 LFKEMLYLCSQFSF--------------------STLLAILPSCNSPESLEFGKSIHCWQ 394
           + K  +Y CS+F F                    S+L+A + SC    S+E  + +HC  
Sbjct: 1   MIKANVYSCSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSC---VSIELCRLLHCKV 57

Query: 395 LK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
           +K + + +  IG + L+  Y+  G  V A  L   +    D   WN +I   +  G+  +
Sbjct: 58  VKSVSYRHGFIG-DQLVGCYLRLGHDVCAEKLFDEMPER-DLVSWNSLISGYSGRGYLGK 115

Query: 454 AIKTF-KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
             +   + M  +    P+ VT +++ISAC       EG+ +HGL +K  +  + +V NA 
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNE 569
           I  YG+  D+ S+  +FE     NL +WN MI    QN    + L  F   R +  EP++
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQ 235

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN------------- 616
            + +++L +C  +GV+R  + IHG +   GF  N  I++ALLD+YS              
Sbjct: 236 ATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHE 295

Query: 617 --CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                + AW++M++AY  HG G +AI+ F  M + GI P   +   LL+ACSHSGLV+EG
Sbjct: 296 ITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEG 355

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
             Y+  M + Y + P  +H+ C+VD+LGRSG LQ+AY  IK +P++P  GVWGA+L AC 
Sbjct: 356 KHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACR 415

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
            + DT++G + AE LF+LEP +   Y+ LSN+Y A G WKDA  I
Sbjct: 416 VYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRI 460



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 228/502 (45%), Gaps = 63/502 (12%)

Query: 174 NVSLSSAVAA-----SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
           + ++SS +AA     S  L  L + KV+ ++  + G+       + + L+  Y + G   
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGF-------IGDQLVGCYLRLGHDV 83

Query: 229 AAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISL 287
            AE+ F  M  +D+VSWN++I G++  G   + F++L  M +      P+  T +++IS 
Sbjct: 84  CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143

Query: 288 CADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
           C       EGR +HG  ++  +  ++ ++N+ +++Y K+  L+ +  LF  ++ + +LVS
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLS-IKNLVS 202

Query: 348 WNSMI-----SGLFKEML-------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           WN+MI     +GL ++ L        +  +   +T LA+L SC     +   + IH   +
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
             GFS N     AL+ +Y   G L  + ++   I+ + D+  W  ++ A   +G  ++AI
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAI 321

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALI 513
           K F+ M      SPD VT  ++++AC +  L  EGK       K    +D R+ +   ++
Sbjct: 322 KHFELMV-HYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR-IDPRLDHYSCMV 379

Query: 514 TMYGRCRDIKSA-STVFESCYNCNLCTWNCMISA---FSQNKAEVRALELFRHLEFEP-- 567
            + GR   ++ A   + E     +   W  ++ A   +   +   +A E  R  E EP  
Sbjct: 380 DLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE--RLFELEPRD 437

Query: 568 --NEISIVSILSAC-------------TQLGVLR--------HGKQIHGHVF-HLGFQEN 603
             N + + +I SA               Q G++R        HG +IH  V       E+
Sbjct: 438 GRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPES 497

Query: 604 SFISSALLDMYSNCKSNAAWSS 625
             I   L ++    KS   + S
Sbjct: 498 EKIQKKLKEIRKKMKSEMGYKS 519



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 14/346 (4%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV--EEGIRFDSTTLLIIVSALTQM 86
           LF E   +D+V+WN++I+       +         M+  E G R +  T L ++SA    
Sbjct: 88  LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147

Query: 87  NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
              ++GR +H L +K G++ +  + N F+N Y K GDL SS   F  +   + VSWNT++
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
              L N   EK L YF      G + D  +  + + +   +G +   + IH L +  G+ 
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
            +    +T +L+ +YS+ G +E +   F  +T  D ++W A++  +A +G   +A     
Sbjct: 268 GNK--CITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF- 324

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS-K 325
           E+ +   + PD  T   L++ C+ S L+ EG+       +R        ++  +D YS  
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR------YRIDPRLDHYSCM 378

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTL 371
            + L ++ LL +A   + ++    S  SG++  +L  C  +  + L
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPS--SGVWGALLGACRVYKDTQL 422



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 182/422 (43%), Gaps = 24/422 (5%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           +++A+     ++  R++HC  +K+       + +  V  Y + G    +E  F  M   D
Sbjct: 37  LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWS--GEQADNVSLSSAVAASACLGELSYGKVI 196
            VSWN+++SG     Y  KC      M  S  G + + V+  S ++A    G    G+ I
Sbjct: 97  LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H L +K G  +   V V N+ I+ Y + GD+ ++ + F  ++ K++VSWN +I     NG
Sbjct: 157 HGLVMKFGVLEE--VKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214

Query: 257 KFEEAFDLLHEMQLMRSV--EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
             E+    L    + R V  EPD AT + ++  C D  ++R  + +HG  +      +  
Sbjct: 215 LAEKG---LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYL 362
           +  +L+D YSK   L  +  +F+ I    D ++W +M++              F+ M++ 
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITS-PDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
                  T   +L +C+    +E GK        +          + ++ +    G L  
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390

Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISA 480
           A+ L++ +     +  W  ++ AC      Q   K  + + + +     + V L N+ SA
Sbjct: 391 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSA 450

Query: 481 CG 482
            G
Sbjct: 451 SG 452



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 83/193 (43%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L  +    + +  Y       SS  LF +   K++V+WN MI   ++N     GL +F
Sbjct: 164 GVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
                 G   D  T L ++ +   M  ++  + +H L +  G   +  +    +++Y+K 
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKL 283

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L  S   F  +   D+++W  +++    + +    + +F  M   G   D+V+ +  +
Sbjct: 284 GRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLL 343

Query: 182 AASACLGELSYGK 194
            A +  G +  GK
Sbjct: 344 NACSHSGLVEEGK 356


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 170/573 (29%), Positives = 281/573 (49%), Gaps = 85/573 (14%)

Query: 283 TLISLCADSLLLREGRSV-HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP 341
           TL+S  A    LRE R V  G  +R    Y     N+L+  Y++     +A  LF AI P
Sbjct: 57  TLVSTYARLGRLREARRVFDGIPLRNTFSY-----NALLSAYARLGRPDEARALFEAI-P 110

Query: 342 MNDLVSWNSMISGLFKEML-----------------YLCSQFSFSTLLAILPSCNSPESL 384
             D  S+N++++ L +                    ++ + +SF++ L+   +C + + L
Sbjct: 111 DPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS---ACAAEKDL 167

Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
             G+ +H    +   +++     AL+ MY  C   V A  +   +   +  S WN +I  
Sbjct: 168 RTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVS-WNSLITC 226

Query: 445 CTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG-LALKSLMG 503
             QNG   EA+  F  M       PD VTL +V+SAC  L    EG+ +H  +  +  + 
Sbjct: 227 YEQNGPVGEALVLFVEM-MATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLR 285

Query: 504 LDTRVQNALITMYGRC-------------------------------RDIKSASTVFESC 532
            D  + NAL+ MY +C                                +++ A  VF   
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQM 345

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGK 589
              N+  WN +I+A++QN  E  A+ LF  L+ +   P   +  ++L+AC  + VL+ G+
Sbjct: 346 VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQ 405

Query: 590 QIHGHVFHLGF------QENSFISSALLDMYSN---------------CKSNAAWSSMIS 628
           Q H HV   GF      + + F+ ++L+DMY                  + N +W++MI 
Sbjct: 406 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 465

Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
            Y  +G+  +A+ LF  M  S   P   ++I +LSAC HSGLVDEG ++++ M E++ + 
Sbjct: 466 GYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGIT 525

Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
           P  +H+ C+VD+LGR+G L+EA E IK++P +P   +W ++L AC  H + ++G++ A  
Sbjct: 526 PSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGR 585

Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           LF+L+PEN G Y+ LSNMY  +G+W D   + +
Sbjct: 586 LFELDPENSGPYVLLSNMYAEMGKWADVFRVRR 618



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 159/641 (24%), Positives = 271/641 (42%), Gaps = 126/641 (19%)

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
           H  G+ +   +R  S    ++ SA +    L   R  H   +K+ +  ++ L N  V+ Y
Sbjct: 7   HHRGQELVAHLRASSPLADLLRSAPS----LPGARAAHGCVLKSPVAGETFLLNTLVSTY 62

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM------------- 165
           A+ G L  +   F G+   +T S+N ++S       P++    F  +             
Sbjct: 63  ARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVA 122

Query: 166 -------GWSGE--------QADNV-----SLSSAVAASACLGELSYGKVIHALGIKLGY 205
                  G +G+         AD+      S +SA++A A   +L  G+ +H L  +  +
Sbjct: 123 ALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPH 182

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
            D   V +  +L+ MY++C     A R F  M  ++VVSWN++I  +  NG   EA  L 
Sbjct: 183 ADD--VHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLF 240

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYS 324
            EM +     PD  T+ +++S CA     REGR VH + ++R  L  D+++ N+L+D Y+
Sbjct: 241 VEM-MATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYA 299

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA----------- 373
           K     +A  +F+++ P   +VS  S+++G  K      +Q  FS ++            
Sbjct: 300 KCGRTWEARCIFDSM-PSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIA 358

Query: 374 --------------------------------ILPSCNSPESLEFGKSIHCWQLKLGF-- 399
                                           +L +C +   L+ G+  H   LK GF  
Sbjct: 359 AYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRF 418

Query: 400 -----SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
                S+  +G N+L+ MY+  G +     + +R++   + S WN +IV   QNG  ++A
Sbjct: 419 DFGPESDVFVG-NSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMIVGYAQNGRAKDA 476

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
           +  F+ M    N +PDSVT++ V+SACG+  L  EG+  H   +    G+          
Sbjct: 477 LHLFERML-CSNENPDSVTMIGVLSACGHSGLVDEGRR-HFHFMTEDHGITP-------- 526

Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
                RD                  + CM+    +      A EL + +  EP+ +   S
Sbjct: 527 ----SRD-----------------HYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWAS 565

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +L AC     +  G++  G +F L   ENS     L +MY+
Sbjct: 566 LLGACRLHKNVELGERTAGRLFELD-PENSGPYVLLSNMYA 605



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 131/528 (24%), Positives = 232/528 (43%), Gaps = 62/528 (11%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG--LHFFGEMVEEGI 69
           +LL+AY+ +   + + ALF    + D  ++NA++ A   +     G  L F   M  +  
Sbjct: 88  ALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDF 147

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             ++ +    +SA      L+ G  VH L  ++    D  +    V+MYAKC     +  
Sbjct: 148 VLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARR 207

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYP-EKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
            F  M   + VSWN++++ C   N P  + L+ F EM  +G   D V+LSS ++A A L 
Sbjct: 208 VFDAMPERNVVSWNSLIT-CYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLA 266

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG----------------------- 225
               G+ +HA  +K        V + N+L+ MY++CG                       
Sbjct: 267 AEREGRQVHAHMVKRDRLRDDMV-LNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSI 325

Query: 226 --------DIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR-SVEP 276
                   ++E A+  F  M  K+V++WN +I  +A NG+ EEA  L   +QL R S+ P
Sbjct: 326 LAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLF--VQLKRDSIWP 383

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLS 330
              T   +++ C +  +L+ G+  H + ++    +      D+ + NSL+D Y K+ S+ 
Sbjct: 384 THYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 443

Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
               +F  +A   D VSWN+MI G            LF+ ML         T++ +L +C
Sbjct: 444 DGAKVFERMA-ARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSAC 502

Query: 379 NSPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
                ++ G+   H      G + +      ++ +    G L  A  L++ +    D+  
Sbjct: 503 GHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL 562

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQ--QQNASPDSVTLVNVISACGN 483
           W  ++ AC  + + +   +T   + +   +N+ P  V L N+ +  G 
Sbjct: 563 WASLLGACRLHKNVELGERTAGRLFELDPENSGP-YVLLSNMYAEMGK 609



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 170/385 (44%), Gaps = 50/385 (12%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L+  Y+       +  +F     ++VV+WN++IT   +N  V   L  F EM+  G  
Sbjct: 190 TALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFF 249

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSEC 129
            D  TL  ++SA   +   ++GR VH   +K   + D   L N  V+MYAKCG    + C
Sbjct: 250 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 309

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM------GWS---------GEQADN 174
            F  M     VS  +I++G   +   E   + F +M       W+         GE+ + 
Sbjct: 310 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 369

Query: 175 VSLSSAVAASACLG-ELSYGKVIHALG----IKLGYEDSPYV---------------SVT 214
           + L   +   +      +YG V++A G    ++LG +   +V                V 
Sbjct: 370 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 429

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           NSL+ MY + G I+   + F  M  +D VSWNA+I G+A NG+ ++A  L   M L  + 
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERM-LCSNE 488

Query: 275 EPDIATVVTLISLCADSLLLREGR-------SVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
            PD  T++ ++S C  S L+ EGR         HG    R           ++D   ++ 
Sbjct: 489 NPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSR------DHYTCMVDLLGRAG 542

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMI 352
            L +AE L   +    D V W S++
Sbjct: 543 HLKEAEELIKDMPTEPDSVLWASLL 567



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 8/258 (3%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           + TS+L  Y+  +  E +  +F +   K+V+ WN +I A  +N      +  F ++  + 
Sbjct: 321 SETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDS 380

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI------ADSSLCNVFVNMYAKCG 122
           I     T   +++A   +  L+ G+  H   +K G        +D  + N  V+MY K G
Sbjct: 381 IWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTG 440

Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
            ++     F  M   D VSWN ++ G   N   +  L  F  M  S E  D+V++   ++
Sbjct: 441 SIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLS 500

Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM-TCKD 241
           A    G +  G+  H   +   +  +P       ++ +  + G ++ AE     M T  D
Sbjct: 501 ACGHSGLVDEGRR-HFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPD 559

Query: 242 VVSWNAIIDGFALNGKFE 259
            V W +++    L+   E
Sbjct: 560 SVLWASLLGACRLHKNVE 577


>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1490

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 207/744 (27%), Positives = 347/744 (46%), Gaps = 111/744 (14%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV-----NMY 118
           + ++G +   +T L ++ +      +  GR++H    + G+  +    +VFV     +MY
Sbjct: 72  LFQQGSKVKRSTYLNLLESCIDSGSIHLGRILHA---RFGLFPEP---DVFVETKLLSMY 125

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           AKCG L  +   F  M   +  +W+ ++      N   +    FR M   G   D+    
Sbjct: 126 AKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVSKLFRLMMEEGVLPDDFLFP 185

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +   A  G++  GK+IH++ IKLG   S  + V+NS++++Y++CG+ + A + F  M 
Sbjct: 186 KILQGCANCGDVETGKLIHSVVIKLGM--SSCLRVSNSILAVYAKCGEWDFATKFFRRMK 243

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DVV+WN+++  +  NGK EEA +L+ EM+    + P + T   LI             
Sbjct: 244 ERDVVAWNSVLLAYCQNGKHEEAVELVEEME-KEGISPGLVTWNILIG------------ 290

Query: 299 SVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
                      GY+ L   ++ MD   K  +       F   A   D+ +W +MISGL  
Sbjct: 291 -----------GYNQLGKCDAAMDLMQKMEN-------FGITA---DVFTWTAMISGLIH 329

Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                     F++M       +  T+++ + +C+  + +  G  +H   +K+GF ++ + 
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLV 389

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
            N+L+ MY  CG L  A  +   +  N D   WN +I    Q G+  +A + F  M Q  
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRM-QDA 447

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
           N  P+ +T   +IS  G ++   EG+++    L   M  D +VQ                
Sbjct: 448 NVRPNIITWNTMIS--GYIKNGDEGEAMD---LFQRMEKDGKVQR--------------- 487

Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
                     N  TWN +I+ + QN  +  ALE+FR ++F    PN ++I+S+L AC  L
Sbjct: 488 ----------NTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLLPACANL 537

Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMI 627
              +  ++IHG V          + +AL D Y+                 K    W+S+I
Sbjct: 538 LGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIITWNSLI 597

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
             Y  HG    A+ELF++M   GI+P + ++ S++ A    G VDEG + + ++  +Y +
Sbjct: 598 GGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHI 657

Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
            P  EH   +V + GRS +L+EA +FI+ + IQ +  +W + L+ C  HGD  M    AE
Sbjct: 658 IPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717

Query: 748 LLFKLEPENVGYYISLSNMYVALG 771
            LF LEPEN      +S +Y ALG
Sbjct: 718 NLFSLEPENTVTENIVSQIY-ALG 740



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 185/708 (26%), Positives = 309/708 (43%), Gaps = 102/708 (14%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGI 69
           T LL+ Y+       +  +F     +++ TW+AMI A   ENR   +    F  M+EEG+
Sbjct: 119 TKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSRENRWREVS-KLFRLMMEEGV 177

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D      I+        ++ G+++H + IK GM +   + N  + +YAKCG+ + +  
Sbjct: 178 LPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRVSNSILAVYAKCGEWDFATK 237

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   D V+WN+++     N   E+ +    EM   G                    
Sbjct: 238 FFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEG-------------------- 277

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA-----ERAFWGMTCKDVVS 244
                             SP +   N LI  Y+Q G  +AA     +   +G+T  DV +
Sbjct: 278 -----------------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITA-DVFT 319

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           W A+I G   NG   +A D+  +M  +  V P+  T+++ +S C+   ++  G  VH  A
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKM-FLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIA 378

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
           ++     D+L+ NSL+D YSK   L  A  +F+++    D+ +WNSMI+G + +  Y   
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITG-YCQAGYCGK 436

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
            +   T +                             N I  N ++  YI  GD   A  
Sbjct: 437 AYELFTRMQ----------------------DANVRPNIITWNTMISGYIKNGDEGEAMD 474

Query: 425 LLQRISHNS----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           L QR+  +     +T+ WN++I    QNG   +A++ F+ M Q     P+SVT+++++ A
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKM-QFSRFMPNSVTILSLLPA 533

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C NL      + +HG  L+  +     V+NAL   Y +  DI  + T+F      ++ TW
Sbjct: 534 CANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIITW 593

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +I  +  + +   ALELF  ++    +PN  ++ SI+ A   +G +  GK+    VF+
Sbjct: 594 NSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKK----VFY 649

Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
                +  I  AL     +C      S+M+S YG   +  EA++   EM      P    
Sbjct: 650 -SIANDYHIIPAL----EHC------SAMVSLYGRSNRLEEALQFIQEMNIQSETPIWE- 697

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE---TEHHVCIVDMLG 702
             S L+ C   G +D  +    N+   + + PE   TE+ V  +  LG
Sbjct: 698 --SFLTGCRIHGDIDMAIHAAENL---FSLEPENTVTENIVSQIYALG 740



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 224/518 (43%), Gaps = 72/518 (13%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCN----KDVVTWNAMITACVENRCVVMG 57
           G    L T   L+  Y+ +   ++++ L  +  N     DV TW AMI+  + N      
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQA 336

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  F +M   G+  ++ T++  VSA + +  +  G  VH +++K G I D  + N  V+M
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDM 396

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y+KCG L  +   F  +   D  +WN++++G     Y  K    F  M     Q  NV  
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM-----QDANV-- 449

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW-- 235
                                          P +   N++IS Y + GD   A   F   
Sbjct: 450 ------------------------------RPNIITWNTMISGYIKNGDEGEAMDLFQRM 479

Query: 236 ---GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
              G   ++  +WN II G+  NGK ++A ++  +MQ  R + P+  T+++L+  CA+ L
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFM-PNSVTILSLLPACANLL 538

Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             +  R +HG  +RR L     + N+L D Y+KS  +  ++ +F  +    D+++WNS+I
Sbjct: 539 GTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGME-TKDIITWNSLI 597

Query: 353 SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
            G            LF +M     + +  TL +I+ +     +++ GK +         +
Sbjct: 598 GGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVF-----YSIA 652

Query: 401 NNTIGVNALMH------MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           N+   + AL H      +Y     L  A   +Q ++  S+T  W   +  C  +G    A
Sbjct: 653 NDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 712

Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACG-NLELAFEGK 491
           I   +++   +  +  +  +V+ I A G  L  + EGK
Sbjct: 713 IHAAENLFSLEPENTVTENIVSQIYALGAKLGRSLEGK 750



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 8/274 (2%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           ++  TWN +I   ++N      L  F +M       +S T+L ++ A   +   K  R +
Sbjct: 487 RNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLLPACANLLGTKMVREI 546

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNY 154
           H   ++  + A  ++ N   + YAK GD+  S+  F GM   D ++WN+++ G  LH +Y
Sbjct: 547 HGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETKDIITWNSLIGGYVLHGSY 606

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
               L  F +M   G + +  +LSS + A   +G +  GK +    I   Y   P +   
Sbjct: 607 -GPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEHC 664

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           ++++S+Y +   +E A +    M  + +   W + + G  ++G  + A   +H  + + S
Sbjct: 665 SAMVSLYGRSNRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA---IHAAENLFS 721

Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +EP+      ++S    +L  + GRS+ G   RR
Sbjct: 722 LEPENTVTENIVSQIY-ALGAKLGRSLEGKKPRR 754


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 191/638 (29%), Positives = 290/638 (45%), Gaps = 132/638 (20%)

Query: 276 PDIATVVTLISLCADSLLLREGRS--------VHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           P   ++ TL+ LC + L     +S        VH   I+  L + + +MN+LM+ YSK+ 
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 328 SLSKAELLFNAIA------------------------------PMNDLVSWNSMISG--- 354
               A  LF+ +                               P  D VSW +MI G   
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    +  +M+    + +  TL  +L S  +   +E GK +H + +KLG   N   
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183

Query: 406 VNALMHMYINCGDLVAAFSLLQRI------SHNS------------------------DT 435
            N+L++MY  CGD + A  +  R+      S N+                        D 
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN +I    Q G+   A+  F  M +    SPD  TL +V+SAC NLE    GK +H 
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303

Query: 496 LALKSLMGLDTRVQNALITMYGRC---------------RDIK----------------- 523
             + +   +   V NALI+MY RC               +D+K                 
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363

Query: 524 -SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSAC 579
             A  +F S  + ++  W  MI  + Q+ +   A+ LFR +      PN  ++ ++LS  
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423

Query: 580 TQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------------KSNAAW 623
           + L  L HGKQIHG     G   +  +S+AL+ MY+                  +   +W
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           +SMI A   HG   EA+ELF  M   G+RP   + + + SAC+H+GLV++G QY++ M +
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
              + P   H+ C+VD+ GR+G LQEA EFI+ +PI+P    WG++LSAC  H +  +GK
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK 603

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             AE L  LEPEN G Y +L+N+Y A G+W++A +I K
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 174/706 (24%), Positives = 293/706 (41%), Gaps = 157/706 (22%)

Query: 74  TTLLIIVSALTQMNCLK-QGR----VVHCLSIKAGMIADSSLCNVFVNMYAKC------- 121
           +TLL + + L Q +  K  GR    +VHC  IK+G++    L N  +N+Y+K        
Sbjct: 10  STLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHAR 69

Query: 122 ------------------------GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEK 157
                                   GD++S+   F  +   D+VSW T++ G  +     K
Sbjct: 70  KLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129

Query: 158 CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
            +    +M   G +    +L++ +A+ A    +  GK +H+  +KLG   +  VSV+NSL
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN--VSVSNSL 187

Query: 218 ISMYSQCGD-------------------------------IEAAERAFWGMTCKDVVSWN 246
           ++MY++CGD                               ++ A   F  M  +D+V+WN
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           ++I GF   G    A D+  +M     + PD  T+ +++S CA+   L  G+ +H + + 
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV- 306

Query: 307 RLLGYDL--LMMNSLMDFYSKSNSLSKAELL-------------FNA-------IAPMN- 343
              G+D+  +++N+L+  YS+   +  A  L             F A       +  MN 
Sbjct: 307 -TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365

Query: 344 -----------DLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
                      D+V+W +MI G            LF+ M+    + +  TL A+L   +S
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             SL  GK IH   +K G   +    NAL+ MY   G++ +A      I    DT  W  
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I+A  Q+GH +EA++ F++M   +   PD +T V V SAC +  L  +G+    +    
Sbjct: 486 MIIALAQHGHAEEALELFETML-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM---- 540

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
                                +K    +  +     L  + CM+  F +      A E  
Sbjct: 541 ---------------------MKDVDKIIPT-----LSHYACMVDLFGRAGLLQEAQEFI 574

Query: 561 RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--- 617
             +  EP+ ++  S+LSAC     +  GK +      L   ENS   SAL ++YS C   
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKW 633

Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEM----CNSGIRPTKSSV 658
            ++     SM        +G+  IE+ H++       G  P K+ +
Sbjct: 634 EEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEI 679



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 141/572 (24%), Positives = 240/572 (41%), Gaps = 89/572 (15%)

Query: 1   RGFLAHLPTST-----SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV 55
           R     +P  T     ++L+AYS     +S+   F +   +D V+W  MI          
Sbjct: 69  RKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYH 128

Query: 56  MGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
             +   G+MV+EGI     TL  +++++    C++ G+ VH   +K G+  + S+ N  +
Sbjct: 129 KAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLL 188

Query: 116 NMYAKCGD-------------------------------LNSSECTFSGMHCADTVSWNT 144
           NMYAKCGD                               ++ +   F  M   D V+WN+
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248

Query: 145 IMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
           ++SG     Y  + L  F +M   S    D  +L+S ++A A L +L  GK IH+  +  
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAER------------------------------- 232
           G++ S    V N+LISMYS+CG +E A R                               
Sbjct: 309 GFDISGI--VLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366

Query: 233 --AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
              F  +  +DVV+W A+I G+  +G + EA +L   M +     P+  T+  ++S+ + 
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAAMLSVASS 425

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
              L  G+ +HG A++    Y + + N+L+  Y+K+ +++ A   F+ I    D VSW S
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485

Query: 351 MISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
           MI              LF+ ML    +    T + +  +C     +  G+        + 
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVD 545

Query: 399 FSNNTIGVNALM-HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
               T+   A M  ++   G L  A   ++++    D   W  ++ AC   +N    +  
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVA 605

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
                + + +N+   S  L N+ SACG  E A
Sbjct: 606 AERLLLLEPENSGAYS-ALANLYSACGKWEEA 636


>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 703

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 171/591 (28%), Positives = 287/591 (48%), Gaps = 76/591 (12%)

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLL-----LREGRSVHGYAIRRLLGYDLLMM 316
           F LL   +L R + P   T   L+   A  L      LR G  +H  ++   L    +++
Sbjct: 52  FPLLAFSRLRRHLPPAAGTSHLLLRPVAALLHHHRSHLRLGVQLHALSLSLGLSRHPILL 111

Query: 317 NSLMDFYSKSNSL--SKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS----- 369
             L+  Y+   SL  S A +  ++  P+     +N +IS   +  L L +  ++      
Sbjct: 112 PRLLSVYTSHPSLLPSAASVAADSTLPL----PYNVLISSCLRHGLPLQALAAYQEMGKN 167

Query: 370 -------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
                  T  ++L +C     L  G+++H      G   N    NALM MY  CGDL +A
Sbjct: 168 GVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASA 227

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---------------- 466
             +   +    D   WN +I +    G + EA++ F+ M  +                  
Sbjct: 228 RKVFDGMVQR-DVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQ 286

Query: 467 ------------------ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
                             A  D VTLV  ++AC  +     GK +HGLA++        V
Sbjct: 287 MRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESV 346

Query: 509 QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EF 565
            NALITMY RC+D++ A  +F       + TWN M+S+F+ +     A  +FR +     
Sbjct: 347 SNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGV 406

Query: 566 EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNA---- 621
           +PN +++V+ L+ C ++  L+HG+++HGH+   GF+    + ++L+DMYS     +    
Sbjct: 407 KPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQN 466

Query: 622 -----------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                      +++SMI+ YG  GKG  A+ LF +M +SGI+P    ++++LSACSHSGL
Sbjct: 467 VFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGL 526

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           V EG + +N M+  Y ++P+ EH+ C++D+  R+G L++A E + + P  P   +W A++
Sbjct: 527 VLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALV 586

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            AC   G+ ++G++ A  L ++  EN G+Y+ ++NMY A G W +   + K
Sbjct: 587 GACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRK 637



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 240/517 (46%), Gaps = 56/517 (10%)

Query: 39  VTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCL 98
           + +N +I++C+ +   +  L  + EM + G+  D  T   ++ A  +   L  GR VH  
Sbjct: 139 LPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMH 198

Query: 99  SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN--------------- 143
           +  AGM  +    N  ++MYAKCGDL S+   F GM   D VSWN               
Sbjct: 199 AAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEA 258

Query: 144 --------------------TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
                               TI  G +        +   REM   G + D V+L   + A
Sbjct: 259 MELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNA 318

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            + +G L  GK IH L +++  +     SV+N+LI+MY++C D+E A   F  + C  VV
Sbjct: 319 CSRVGWLRLGKEIHGLAVRMCCDQVE--SVSNALITMYARCKDMECARMLFRMLECPGVV 376

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WN ++  FAL+   EEA  +  EM + R V+P+  TVVT ++LCA    L+ G+ +HG+
Sbjct: 377 TWNTMLSSFALSDCAEEASSIFREM-ICRGVKPNYVTVVTYLALCARVANLQHGQELHGH 435

Query: 304 AIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
            ++    GY LL  NSL+D YSKS  LS A+ +F+ +    D++S+ SMI+G        
Sbjct: 436 IVKHGFKGYRLLW-NSLIDMYSKSGRLSVAQNVFDTMDDC-DMISYTSMIAGYGMQGKGT 493

Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
               LF++M+    +     ++ +L +C +S   LE  +  +   +  G        + +
Sbjct: 494 VALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCM 553

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
           + +Y   G L  A  +L        ++ W  ++ AC   G+ +   +  + + + +  + 
Sbjct: 554 IDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENA 613

Query: 470 DSVTLV-NVISACGNL-ELAFEGKSLHGLALKSLMGL 504
               L+ N+ +A G   ELA   K +  L +    GL
Sbjct: 614 GHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGL 650



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 134/551 (24%), Positives = 242/551 (43%), Gaps = 88/551 (15%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT---VSWNTI 145
           L+ G  +H LS+  G+     L    +++Y     L  S  + +    AD+   + +N +
Sbjct: 89  LRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVA----ADSTLPLPYNVL 144

Query: 146 MSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
           +S CL +  P + L  ++EMG +G   D  +  S + A A   EL  G+ +H      G 
Sbjct: 145 ISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGM 204

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           + + +    N+L+SMY++CGD+ +A + F GM  +DVVSWN++I  +A  G++ EA +L 
Sbjct: 205 DGNLFFQ--NALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELF 262

Query: 266 HEMQ-----------------------------LMRSV-----EPDIATVVTLISLCADS 291
             M+                             L+R +     E D  T+V  ++ C+  
Sbjct: 263 RRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRV 322

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             LR G+ +HG A+R        + N+L+  Y++   +  A +LF  +     +V+WN+M
Sbjct: 323 GWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLE-CPGVVTWNTM 381

Query: 352 I------------SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           +            S +F+EM+    + ++ T++  L  C    +L+ G+ +H   +K GF
Sbjct: 382 LSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGF 441

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
               +  N+L+ MY   G L  A ++   +  + D   +  +I      G    A++ F+
Sbjct: 442 KGYRLLWNSLIDMYSKSGRLSVAQNVFDTMD-DCDMISYTSMIAGYGMQGKGTVALRLFE 500

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
            M       PD + +V V+SAC +  L  EG+ L                N ++  YG  
Sbjct: 501 QMI-DSGIKPDHIIMVTVLSACSHSGLVLEGEELF---------------NKMVISYG-- 542

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
             IK             +  ++CMI  +++     +A E+  H  F P      +++ AC
Sbjct: 543 --IKP-----------QMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGAC 589

Query: 580 TQLGVLRHGKQ 590
              G +  G++
Sbjct: 590 HDRGNIEIGER 600



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 174/335 (51%), Gaps = 16/335 (4%)

Query: 12  SLLTAYSNVSYFESSLALFY----ETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           S++++Y+ V  +  ++ LF     E    + VTWN +    ++ R     +    EMV  
Sbjct: 244 SMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRG 303

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  TL+I ++A +++  L+ G+ +H L+++       S+ N  + MYA+C D+  +
Sbjct: 304 GAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECA 363

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  + C   V+WNT++S    ++  E+    FREM   G + + V++ + +A  A +
Sbjct: 364 RMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARV 423

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             L +G+ +H   +K G++   Y  + NSLI MYS+ G +  A+  F  M   D++S+ +
Sbjct: 424 ANLQHGQELHGHIVKHGFKG--YRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTS 481

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHG 302
           +I G+ + GK   A  L  +M +   ++PD   +VT++S C+ S L+ EG     + V  
Sbjct: 482 MIAGYGMQGKGTVALRLFEQM-IDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVIS 540

Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
           Y I+  + +     + ++D Y+++  L KAE + +
Sbjct: 541 YGIKPQMEH----YSCMIDLYARAGLLEKAEEMLD 571



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 11/228 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S +L+T Y+     E +  LF       VVTWN M+++   + C       F EM+  G
Sbjct: 346 VSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRG 405

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           ++ +  T++  ++   ++  L+ G+ +H   +K G      L N  ++MY+K G L+ ++
Sbjct: 406 VKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQ 465

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA--- 185
             F  M   D +S+ ++++G          L  F +M  SG + D++ + + ++A +   
Sbjct: 466 NVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSG 525

Query: 186 --CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
               GE  + K++ + GIK      P +   + +I +Y++ G +E AE
Sbjct: 526 LVLEGEELFNKMVISYGIK------PQMEHYSCMIDLYARAGLLEKAE 567


>gi|302774729|ref|XP_002970781.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
 gi|300161492|gb|EFJ28107.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
          Length = 517

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 165/516 (31%), Positives = 266/516 (51%), Gaps = 33/516 (6%)

Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
           L+  C+    L  GR +H   +R  L    L+ N L+  Y +   L +A  +F+   P  
Sbjct: 4   LLRQCSKQRSLHSGRRLHAQILRHRLDRHTLLCNLLVQMYGRCGCLDEARSIFDK-TPER 62

Query: 344 DLVSWNSMISG------------LFKEMLYLC-SQFSFSTLLAILPSCNSPESLEFGKSI 390
           +L SW+ MI+             +++EML         +T ++ L +C++   LE GKSI
Sbjct: 63  NLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGKSI 122

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H   L      +     AL+ MY  CG L  A      +    D   WN +I A  QNGH
Sbjct: 123 HERILSSKLEIDAFLGTALISMYSKCGCLEEAHECFDCVLRK-DIVVWNAMIAAFAQNGH 181

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQ 509
            Q A+  F ++ + +   P+++TLV+ + AC +L    EG+ +H L   S  + L   + 
Sbjct: 182 PQRALNFFHAIPRGE-LQPNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLGGSMG 240

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
           NAL+ +YG+C     A  VF++     + +W  MI+A++QN    +ALELF+ ++  PN 
Sbjct: 241 NALVNLYGKCGRAIDARAVFDALRPRTVVSWTSMIAAYAQNGHSDQALELFQRMDMAPNG 300

Query: 570 ISIVSILSACTQLGVLRH-GKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
           ++++S+L AC++     H GK IH H+   GF  +  + SAL++MY              
Sbjct: 301 VTLLSVLQACSEHRKGSHAGKTIHAHIRLAGFDGSPLLDSALVNMYGKVGNLDSAMVVFT 360

Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
               +    W++MIS+Y  HG   +A+ LF  M   GI     ++  + SACSHSG V  
Sbjct: 361 QMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVTLACVSSACSHSGDVKL 420

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G  Y+ + + ++  RP  EH+V + DML R+G+LQEA + ++++P QP    W  +LSAC
Sbjct: 421 GWDYFVSSVRDFGERPTFEHYVVMSDMLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSAC 480

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
           S+H +  +GK+VA+ + +L P +    + LSN+Y A
Sbjct: 481 SNHNNPHVGKRVADRILELSPSDPAALVLLSNIYSA 516



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 252/520 (48%), Gaps = 43/520 (8%)

Query: 84  TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
           ++   L  GR +H   ++  +   + LCN+ V MY +CG L+ +   F      +  SW+
Sbjct: 9   SKQRSLHSGRRLHAQILRHRLDRHTLLCNLLVQMYGRCGCLDEARSIFDKTPERNLFSWS 68

Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLGELSYGKVIHALGIK 202
            +++    N +P   L  +REM      A D+ +  SA++A + LG+L  GK IH   + 
Sbjct: 69  IMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGKSIHERILS 128

Query: 203 LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF 262
              E   ++    +LISMYS+CG +E A   F  +  KD+V WNA+I  FA NG  + A 
Sbjct: 129 SKLEIDAFLGT--ALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGHPQRAL 186

Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY---AIRRLLGYDLLMMNSL 319
           +  H +     ++P+  T+V+ +  C+D   L EGR +H     +    LG    M N+L
Sbjct: 187 NFFHAIP-RGELQPNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLGGS--MGNAL 243

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS----T 370
           ++ Y K      A  +F+A+ P   +VSW SMI+     G   + L L  +   +    T
Sbjct: 244 VNLYGKCGRAIDARAVFDALRPRT-VVSWTSMIAAYAQNGHSDQALELFQRMDMAPNGVT 302

Query: 371 LLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRI 429
           LL++L +C+   +    GK+IH      GF  + +  +AL++MY   G+L +A  +  ++
Sbjct: 303 LLSVLQACSEHRKGSHAGKTIHAHIRLAGFDGSPLLDSALVNMYGKVGNLDSAMVVFTQM 362

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLEL 486
               D   W  +I +  Q+GH ++A+  F SM     A+ D+VTL  V SAC   G+++L
Sbjct: 363 -RERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIAT-DAVTLACVSSACSHSGDVKL 420

Query: 487 AFEGKSLHGLALKSLMGLDTR-------VQNALITMYGRCRDIKSASTVFESC-YNCNLC 538
            ++        + S+     R       V + +++  GR   ++ A  +  S  +  +L 
Sbjct: 421 GWD------YFVSSVRDFGERPTFEHYVVMSDMLSRAGR---LQEAEDLLRSMPFQPDLV 471

Query: 539 TWNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
           +W  ++SA S  N   V      R LE  P++ + + +LS
Sbjct: 472 SWRTLLSACSNHNNPHVGKRVADRILELSPSDPAALVLLS 511



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 232/494 (46%), Gaps = 42/494 (8%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR-F 71
           L+  Y      + + ++F +T  +++ +W+ MI A  +N      L  + EM++  I   
Sbjct: 39  LVQMYGRCGCLDEARSIFDKTPERNLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAI 98

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DSTT +  +SA + +  L+ G+ +H   + + +  D+ L    ++MY+KCG L  +   F
Sbjct: 99  DSTTYVSALSACSALGDLETGKSIHERILSSKLEIDAFLGTALISMYSKCGCLEEAHECF 158

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   D V WN +++    N +P++ L +F  +     Q +N++L SA+ A + L  L 
Sbjct: 159 DCVLRKDIVVWNAMIAAFAQNGHPQRALNFFHAIPRGELQPNNLTLVSALDACSDLAALE 218

Query: 192 YGKVIHALGIKLGYEDSPYV----SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            G+ IHAL      E SP +    S+ N+L+++Y +CG    A   F  +  + VVSW +
Sbjct: 219 EGRKIHAL-----IESSPELTLGGSMGNALVNLYGKCGRAIDARAVFDALRPRTVVSWTS 273

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIR 306
           +I  +A NG  ++A +L   M +     P+  T+++++  C++       G+++H +   
Sbjct: 274 MIAAYAQNGHSDQALELFQRMDM----APNGVTLLSVLQACSEHRKGSHAGKTIHAHI-- 327

Query: 307 RLLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----------- 353
           RL G+D   L+ ++L++ Y K  +L  A ++F  +    D ++W +MIS           
Sbjct: 328 RLAGFDGSPLLDSALVNMYGKVGNLDSAMVVFTQMRE-RDAITWTAMISSYAQHGHSRQA 386

Query: 354 -GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-----KSIHCWQLKLGFSNNTIGVN 407
             LF  ML         TL  +  +C+    ++ G      S+  +  +  F +  +   
Sbjct: 387 LSLFSSMLLDGIATDAVTLACVSSACSHSGDVKLGWDYFVSSVRDFGERPTFEHYVV--- 443

Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
            +  M    G L  A  LL+ +    D   W  ++ AC+ + +     +    + +   +
Sbjct: 444 -MSDMLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSACSNHNNPHVGKRVADRILELSPS 502

Query: 468 SPDSVTLV-NVISA 480
            P ++ L+ N+ SA
Sbjct: 503 DPAALVLLSNIYSA 516



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 244/518 (47%), Gaps = 57/518 (11%)

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  G+ +HA  ++  +    +  + N L+ MY +CG ++ A   F     +++ SW+ +I
Sbjct: 14  LHSGRRLHAQILR--HRLDRHTLLCNLLVQMYGRCGCLDEARSIFDKTPERNLFSWSIMI 71

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
             +A NG    A  +  EM L RS+   D  T V+ +S C+    L  G+S+H   +   
Sbjct: 72  AAYAQNGHPTFALAVYREM-LQRSIHAIDSTTYVSALSACSALGDLETGKSIHERILSSK 130

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
           L  D  +  +L+  YSK   L +A   F+ +    D+V WN+MI+              F
Sbjct: 131 LEIDAFLGTALISMYSKCGCLEEAHECFDCVL-RKDIVVWNAMIAAFAQNGHPQRALNFF 189

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW-----QLKLGFSNNTIGVNALMH 411
             +     Q +  TL++ L +C+   +LE G+ IH       +L LG S      NAL++
Sbjct: 190 HAIPRGELQPNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLGGSMG----NALVN 245

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           +Y  CG  + A ++   +   +  S W  +I A  QNGH  +A++ F+ M    + +P+ 
Sbjct: 246 LYGKCGRAIDARAVFDALRPRTVVS-WTSMIAAYAQNGHSDQALELFQRM----DMAPNG 300

Query: 472 VTLVNVISACG-NLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTV 528
           VTL++V+ AC  + + +  GK++H  A   L G D    + +AL+ MYG+  ++ SA  V
Sbjct: 301 VTLLSVLQACSEHRKGSHAGKTIH--AHIRLAGFDGSPLLDSALVNMYGKVGNLDSAMVV 358

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      +  TW  MIS+++Q+    +AL LF  +  +    + +++  + SAC+  G +
Sbjct: 359 FTQMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVTLACVSSACSHSGDV 418

Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
           +           LG+  + F+SS  +  +    +   +  M       G+  EA +L   
Sbjct: 419 K-----------LGW--DYFVSS--VRDFGERPTFEHYVVMSDMLSRAGRLQEAEDLLRS 463

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           M     +P   S  +LLSACS+      G +  + +LE
Sbjct: 464 M---PFQPDLVSWRTLLSACSNHNNPHVGKRVADRILE 498



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 17/351 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+L++ YS     E +   F     KD+V WNAMI A  +N      L+FF  +    ++
Sbjct: 139 TALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGHPQRALNFFHAIPRGELQ 198

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
            ++ TL+  + A + +  L++GR +H L      +    S+ N  VN+Y KCG    +  
Sbjct: 199 PNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLGGSMGNALVNLYGKCGRAIDARA 258

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  +     VSW ++++    N + ++ L  F+ M  +    + V+L S + A +   +
Sbjct: 259 VFDALRPRTVVSWTSMIAAYAQNGHSDQALELFQRMDMA---PNGVTLLSVLQACSEHRK 315

Query: 190 LSY-GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            S+ GK IHA     G++ SP +   ++L++MY + G++++A   F  M  +D ++W A+
Sbjct: 316 GSHAGKTIHAHIRLAGFDGSPLLD--SALVNMYGKVGNLDSAMVVFTQMRERDAITWTAM 373

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-----RSVHGY 303
           I  +A +G   +A  L   M L+  +  D  T+  + S C+ S  ++ G      SV  +
Sbjct: 374 ISSYAQHGHSRQALSLFSSM-LLDGIATDAVTLACVSSACSHSGDVKLGWDYFVSSVRDF 432

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             R    + ++M     D  S++  L +AE L  ++    DLVSW +++S 
Sbjct: 433 GERPTFEHYVVM----SDMLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSA 479


>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
 gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
          Length = 495

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 254/485 (52%), Gaps = 33/485 (6%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCS 364
           NSL++ Y K   + +A   F ++   N ++SW++M++             LF++M     
Sbjct: 14  NSLLNMYGKCGGVEEAREFFESMTHRN-VISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72

Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
           + +  T L++L +C + E++E G+ IH    +       I   AL+ MY  C  L+ A  
Sbjct: 73  EPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQ 132

Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
           +   I    D   W+ +I A  Q GH +EAI+ F  M       P+ + L++++ AC + 
Sbjct: 133 VFDGIVEK-DVVTWSTMISAYAQLGHVREAIQLFGYMNLD-GVRPNEIILMSILGACSSA 190

Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
               EGK  H L +    G D    N LI MYG+C D+ SA  VF      +L +W+ M+
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAML 250

Query: 545 SAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
           +  +++     A   FR ++ E   P+ ++ VS+L AC+ LG L  G  IH  +   GFQ
Sbjct: 251 AVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQ 310

Query: 602 ENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEM 646
              +I ++L+DMY  C S  A               W++MI+A   H +G EA+ELF EM
Sbjct: 311 SVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEM 370

Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
             +G++P + + +S++ +CSHSGLV+EG  Y+  M+E+    P  EH V ++D+LGRSGK
Sbjct: 371 EKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGK 430

Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
           L EA E ++ +P++P    W  +LSAC  H DT+   +VA  +  L P + G Y+S SN+
Sbjct: 431 LNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFSNI 490

Query: 767 YVALG 771
               G
Sbjct: 491 LSGKG 495



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 51/476 (10%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V NSL++MY +CG +E A   F  MT ++V+SW+ ++  +A  G  ++A  L  +M+   
Sbjct: 12  VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKME-EE 70

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            VEP+  T ++++  CA++  + +G  +H    R+ L   L++  +L+  Y K + L +A
Sbjct: 71  GVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEA 130

Query: 333 ELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNS 380
             +F+ I    D+V+W++MIS     G  +E + L    +          L++IL +C+S
Sbjct: 131 RQVFDGIVE-KDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSS 189

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             +L  GK  H   +  GF  +    N L+ MY  CGDL +A ++   +    D   W+ 
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR-DLISWSA 248

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH----GL 496
           ++    ++GH ++A   F+ M   +   PD VT V+++ AC  L    EG  +H      
Sbjct: 249 MLAVIAEHGHCKDAFVHFRRM-DLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAE 307

Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRA 556
             +S+M     ++N+LI MYG+C  +++A  +F+   + N+ TW  MI+A  Q++    A
Sbjct: 308 GFQSVM----YIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEA 363

Query: 557 LELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           LELF  +E    +P++++ +SI+ +C+  G++  G+     ++ L   E+   +  +   
Sbjct: 364 LELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGR-----IYFLKMVEDQSFTPGV--- 415

Query: 614 YSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSACS 666
                    +  M+   G  GK  EA EL   M      P +  V+   +LLSAC 
Sbjct: 416 -------EHFVGMLDLLGRSGKLNEAEELMEFM------PVEPGVVGWNTLLSACK 458



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 10/351 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L   T+L+  Y   S    +  +F     KDVVTW+ MI+A  +   V   +  FG M  
Sbjct: 111 LIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNL 170

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +G+R +   L+ I+ A +    L +G++ H L +  G  AD S  N  + MY KCGDL S
Sbjct: 171 DGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLAS 230

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           ++  F GM   D +SW+ +++    + + +   ++FR M   G + D V+  S + A + 
Sbjct: 231 AKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSL 290

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
           LG L  G VIH      G++   Y+   NSLI MY +CG ++AA   F  M+ ++V++W 
Sbjct: 291 LGALVEGHVIHTRIRAEGFQSVMYIE--NSLIDMYGKCGSLQAAREIFDRMSHRNVITWT 348

Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
            +I     + + +EA +L  EM+    V+PD    +++I  C+ S L+ EGR    Y ++
Sbjct: 349 TMITACVQHEQGKEALELFEEME-KAGVQPDQVAFLSIIHSCSHSGLVEEGRI---YFLK 404

Query: 307 RL----LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +        +     ++D   +S  L++AE L   +     +V WN+++S
Sbjct: 405 MVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLS 455



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 225/491 (45%), Gaps = 30/491 (6%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL  Y      E +   F    +++V++W+ M+ A  +       L  F +M EEG+  
Sbjct: 15  SLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEP 74

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +  T L ++ A      ++QG ++H L  +  +     +    V MY KC  L  +   F
Sbjct: 75  NEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQVF 134

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            G+   D V+W+T++S      +  + +  F  M   G + + + L S + A +  G L+
Sbjct: 135 DGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALA 194

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            GK+ H L +  G+     VS  N+LI MY +CGD+ +A+  F GM  +D++SW+A++  
Sbjct: 195 EGKMTHELVVICGF--GADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAV 252

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
            A +G  ++AF     M L   V+PD  T V+L+  C+    L EG  +H     R  G+
Sbjct: 253 IAEHGHCKDAFVHFRRMDL-EGVKPDYVTFVSLLDACSLLGALVEGHVIHTRI--RAEGF 309

Query: 312 DLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
             +M   NSL+D Y K  SL  A  +F+ ++  N +++W +MI+             LF+
Sbjct: 310 QSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRN-VITWTTMITACVQHEQGKEALELFE 368

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL----GFSNNTIGVNALMHMY 413
           EM     Q      L+I+ SC+    +E G+    + LK+     F+        ++ + 
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGR---IYFLKMVEDQSFTPGVEHFVGMLDLL 425

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM--TQQQNASPDS 471
              G L  A  L++ +        WN ++ AC  +   + A +    M      +A P  
Sbjct: 426 GRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGP-Y 484

Query: 472 VTLVNVISACG 482
           V+  N++S  G
Sbjct: 485 VSFSNILSGKG 495



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 22/460 (4%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +NMY KCG +  +   F  M   + +SW+T+++        ++ L+ F++M   G +
Sbjct: 14  NSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVE 73

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            + V+  S + A A    +  G++IH L  +   +    + V  +L+ MY +C  +  A 
Sbjct: 74  PNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVG--LIVGTALVGMYGKCSRLIEAR 131

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
           + F G+  KDVV+W+ +I  +A  G   EA  L   M L   V P+   +++++  C+ +
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNL-DGVRPNEIILMSILGACSSA 190

Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
             L EG+  H   +    G D+   N+L+  Y K   L+ A+ +F  +    DL+SW++M
Sbjct: 191 GALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGM-ERRDLISWSAM 249

Query: 352 ISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
           ++ +            F+ M     +  + T +++L +C+   +L  G  IH      GF
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGF 309

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
            +     N+L+ MY  CG L AA  +  R+SH  +   W  +I AC Q+   +EA++ F+
Sbjct: 310 QSVMYIENSLIDMYGKCGSLQAAREIFDRMSHR-NVITWTTMITACVQHEQGKEALELFE 368

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYG 517
            M ++    PD V  +++I +C +  L  EG+ ++ L +         V++   ++ + G
Sbjct: 369 EM-EKAGVQPDQVAFLSIIHSCSHSGLVEEGR-IYFLKMVEDQSFTPGVEHFVGMLDLLG 426

Query: 518 RCRDIKSASTVFE-SCYNCNLCTWNCMISAFSQNKAEVRA 556
           R   +  A  + E       +  WN ++SA   +    RA
Sbjct: 427 RSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERA 466



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 20/251 (7%)

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
           V N+L+ MYG+C  ++ A   FES  + N+ +W+ M++A++Q     +AL LF+ +E   
Sbjct: 12  VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71

Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
            EPNE++ +S+L AC     +  G+ IH  V          + +AL+ MY  C       
Sbjct: 72  VEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEAR 131

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K    WS+MISAY   G   EAI+LF  M   G+RP +  ++S+L ACS +G
Sbjct: 132 QVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAG 191

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
            + EG +  + ++       +      ++ M G+ G L  A      +  +     W AM
Sbjct: 192 ALAEG-KMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLIS-WSAM 249

Query: 730 LSACSHHGDTK 740
           L+  + HG  K
Sbjct: 250 LAVIAEHGHCK 260



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF A + T  +L+  Y       S+ A+F     +D+++W+AM+    E+         F
Sbjct: 207 GFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHF 266

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG++ D  T + ++ A + +  L +G V+H      G  +   + N  ++MY KC
Sbjct: 267 RRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKC 326

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G L ++   F  M   + ++W T+++ C+ +   ++ L  F EM  +G Q D V+  S +
Sbjct: 327 GSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSII 386

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + +  G +  G+ I+ L +      +P V     ++ +  + G +  AE     M  + 
Sbjct: 387 HSCSHSGLVEEGR-IYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEP 445

Query: 242 -VVSWNAII 249
            VV WN ++
Sbjct: 446 GVVGWNTLL 454


>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
 gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
          Length = 694

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 187/682 (27%), Positives = 329/682 (48%), Gaps = 59/682 (8%)

Query: 141 SWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALG 200
           SW  I+S  +  ++    L  FR M   G++AD V+L++ + A + L +L  GK+IH+L 
Sbjct: 9   SWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMIHSLI 68

Query: 201 IKLGYEDSP----YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           ++LGY +       + V NSL++MY++C  +  A   F  M  + V SW  ++  FA NG
Sbjct: 69  VELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNG 128

Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
           + + A     +M     V+P+  T V L++ C+    L  GR +        L  DL++ 
Sbjct: 129 QLQRAIQCYRQM-CCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDLIVG 187

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL--AI 374
           +++++FY K   L +A   F+ + P  + V+WN MI+   +      +   F+T+    +
Sbjct: 188 SAIVNFYGKCGRLDEAREAFDRM-PAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGV 246

Query: 375 LPSCNSPES-------LEFGKSIHCWQL--KLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
           +P   +  S       LE GK IH   +  +    ++    NAL+HMY  CG L  A  +
Sbjct: 247 VPDAMAVSSILGACSGLESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLV 306

Query: 426 LQRISHNSDTSCWNIVIVACTQN---GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
              I  + +T  W  +I A  Q       + A + F+ M      +P  VT+   +  C 
Sbjct: 307 FLAIP-SKNTVSWTTIIAAFAQQENRDDIEAAFQLFREM-DLDGVAPSEVTIFYALETCS 364

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQ--------NALITMYGRCRDIKSASTVFES--- 531
            ++    G    G AL + M    RV+        N+L+ MY  C  +  A  +F     
Sbjct: 365 KMD---RGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLL 421

Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
             N ++ +W  MI+A+ Q+     AL L + ++ E    +EI++ +IL ACT       G
Sbjct: 422 GKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQATSLG 481

Query: 589 KQIHGHVFHLGFQENSFISSALLDMY------------------SNCKSNAAWSSMISAY 630
           +++H     LG+  N+ + +AL+ MY                  +N  ++  +++MI+ Y
Sbjct: 482 RELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMIAGY 541

Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
              G+  +A+ L++EM   G+ P  ++  S+  ACSH+G + + L+++  + +   + P 
Sbjct: 542 ARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALEHFVFIYDFQGLEPT 601

Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
            EH  C+VD+LGRSG ++EA E +  +P +P    W ++L++C    D    ++ AE   
Sbjct: 602 AEHFGCVVDLLGRSGFVREAEELVLAMPYEPDIVAWRSLLASCG-GSDQGASRRAAEEAV 660

Query: 751 KLEPEN-VGYYISLSNMYVALG 771
            L+P     +Y+ LSN+   +G
Sbjct: 661 HLQPSGCSSHYVLLSNLVKTVG 682



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 280/605 (46%), Gaps = 46/605 (7%)

Query: 33  TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG 92
           +  K+V +W  +I+A V        L  F  M +EG R D  TL  ++ A + +  L+QG
Sbjct: 2   SSRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQG 61

Query: 93  RVVHCLSI------KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
           +++H L +      + G   D  + N  VNMYAKC  L  +   F  M      SW  ++
Sbjct: 62  KMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMV 121

Query: 147 SGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE 206
           +    N   ++ +  +R+M   G   + V+  + +AA +  GEL+ G+ I A  ++    
Sbjct: 122 TAFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAAR-VEASGL 180

Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
           DS  + V +++++ Y +CG ++ A  AF  M  K+ V+WN +I  +  +G   +A DL  
Sbjct: 181 DSDLI-VGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFA 239

Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI--RRLLGYDLLMMNSLMDFYS 324
            M+    V PD   V +++  C+    L  G+ +H   I  R+ L  D  + N+L+  Y+
Sbjct: 240 TME-DEGVVPDAMAVSSILGACSG---LESGKRIHSAVIDRRQELQSDRAVCNALVHMYA 295

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG---------------LFKEMLYLCSQFSFS 369
           +  SL  A L+F AI P  + VSW ++I+                LF+EM       S  
Sbjct: 296 RCGSLDDARLVFLAI-PSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEV 354

Query: 370 TLLAILPSCNSPE--SLEFGKSIHCWQLKLG---FSNNTIGVNALMHMYINCGDLVAAFS 424
           T+   L +C+  +   L  G+++H      G     ++   +N+L+ MY +CG L+ A +
Sbjct: 355 TIFYALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEA 414

Query: 425 LL--QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
           +     +  N D   W  +I A  Q+G    A+   K M   +    D + +  ++ AC 
Sbjct: 415 IFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKM-DLEGVKSDEIAMSTILGACT 473

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC---T 539
             +    G+ LH  A +     +T V NAL+ MYG    +  A+ VF+   N N     T
Sbjct: 474 AHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSNT 533

Query: 540 WNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
           +  MI+ +++    ++AL L+  +     EP + +  SI  AC+  G L   K +   VF
Sbjct: 534 FTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFL--AKALEHFVF 591

Query: 597 HLGFQ 601
              FQ
Sbjct: 592 IYDFQ 596



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 269/588 (45%), Gaps = 37/588 (6%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L    SL+  Y+       ++A+F    N+ V +W  M+TA  +N  +   +  + +M  
Sbjct: 83  LMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCC 142

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
           +G+  ++ T + +++A +    L  GR +      +G+ +D  + +  VN Y KCG L+ 
Sbjct: 143 DGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDE 202

Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
           +   F  M   + V+WN +++  + +    + +  F  M   G   D +++SS +   AC
Sbjct: 203 AREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILG--AC 260

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
            G L  GK IH+  I    E     +V N+L+ MY++CG ++ A   F  +  K+ VSW 
Sbjct: 261 SG-LESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWT 319

Query: 247 AIIDGFALN---GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREGRSVH 301
            II  FA        E AF L  EM L   V P   T+   +  C+  D   L  GR++H
Sbjct: 320 TIIAAFAQQENRDDIEAAFQLFREMDL-DGVAPSEVTIFYALETCSKMDRGGLASGRALH 378

Query: 302 ---GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF--NAIAPMNDLVSWNSMIS--- 353
                A R  L   + ++NSL+D Y+   SL  AE +F  + +    D+VSW +MI+   
Sbjct: 379 TAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYV 438

Query: 354 --GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
             G     L L  +            +  IL +C + ++   G+ +H    +LG+++NTI
Sbjct: 439 QHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTI 498

Query: 405 GVNALMHMYINCGDLVAAFSLLQRI--SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
             NAL+ MY + G +  A  + Q +  +++ +++ +  +I    + G   +A+  +  M 
Sbjct: 499 VGNALVFMYGSWGRVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMN 558

Query: 463 QQQNASPDSVTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQN--ALITMYGRC 519
                 P   T  ++  AC +    F  K+L H + +    GL+   ++   ++ + GR 
Sbjct: 559 -LHGVEPRDATFTSIFQACSH--AGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDLLGRS 615

Query: 520 RDIKSAST-VFESCYNCNLCTWNCMISA--FSQNKAEVRALELFRHLE 564
             ++ A   V    Y  ++  W  ++++   S   A  RA E   HL+
Sbjct: 616 GFVREAEELVLAMPYEPDIVAWRSLLASCGGSDQGASRRAAEEAVHLQ 663



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 174/374 (46%), Gaps = 25/374 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + L   ++++  Y      + +   F     K+ VTWN MI A V++      +  F
Sbjct: 179 GLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLF 238

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI--KAGMIADSSLCNVFVNMYA 119
             M +EG+  D+   + + S L   + L+ G+ +H   I  +  + +D ++CN  V+MYA
Sbjct: 239 ATMEDEGVVPDA---MAVSSILGACSGLESGKRIHSAVIDRRQELQSDRAVCNALVHMYA 295

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVS 176
           +CG L+ +   F  +   +TVSW TI++        +  E     FREM   G     V+
Sbjct: 296 RCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVT 355

Query: 177 LSSAVAASACL--GELSYGKVIH-ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
           +  A+   + +  G L+ G+ +H A+      E    V V NSL+ MY+ CG +  AE  
Sbjct: 356 IFYALETCSKMDRGGLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAI 415

Query: 234 FWGMTCK---DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
           F+        DVVSW  +I  +  +G+   A  L  +M L   V+ D   + T++  C  
Sbjct: 416 FFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDL-EGVKSDEIAMSTILGACTA 474

Query: 291 SLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLF----NAIAPMND 344
                 GR +H  A  R LGY  + ++ N+L+  Y     +  A  +F    NA +P ++
Sbjct: 475 HQATSLGRELHRRA--RELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPNSN 532

Query: 345 LVSWNSMISGLFKE 358
             ++ +MI+G  ++
Sbjct: 533 --TFTAMIAGYARQ 544


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 261/494 (52%), Gaps = 70/494 (14%)

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKE------MLY 361
           + +   L++ Y+    +S +   F+ I P  D+ +WNSMIS     G F E       L 
Sbjct: 51  IFISTRLVNLYANLGDVSLSRCTFDQI-PQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL 109

Query: 362 LCSQF--SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L S+    F T   +L +C +   L  G+ IHCW  KLGF  N     +L+HMY   G  
Sbjct: 110 LVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFT 166

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A SL   +    D   WN +I    QNG+  +A+                        
Sbjct: 167 GIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVLD-------------------- 205

Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
                E+  EG  ++ + + S++ +        + MY +   + SA  VFE     ++ +
Sbjct: 206 -----EMRLEGIKMNFVTVVSILPV-------FVDMYAKLGLLDSAHKVFEIIPVKDVIS 253

Query: 540 WNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           WN +I+ ++QN     A+E+++ +E      PN+ + VSIL A   +G L+ G +IHG V
Sbjct: 254 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV 313

Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
                  + F+++ L+D+Y  C               +S+  W+++IS +G HG   + +
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 373

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
           +LF EM + G++P   + +SLLSACSHSG V+EG ++   +++EY ++P  +H+ C+VD+
Sbjct: 374 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG-KWCFRLMQEYGIKPSLKHYGCMVDL 432

Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYY 760
           LGR+G L+ AY+FIK++P+QP   +WGA+L AC  HG+ ++GK  ++ LF+++ +NVGYY
Sbjct: 433 LGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYY 492

Query: 761 ISLSNMYVALGRWK 774
           + LSN+Y  +G+W+
Sbjct: 493 VLLSNIYANVGKWE 506



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 236/521 (45%), Gaps = 50/521 (9%)

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
            + K +HAL +  G   S ++S    L+++Y+  GD+  +   F  +  KDV +WN++I 
Sbjct: 33  PFAKCLHALLVVAGKVQSIFIS--TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMIS 90

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            +  NG F EA    +++ L+  + PD  T   ++  C     L +GR +H +A +    
Sbjct: 91  AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQ 147

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFST 370
           +++ +  SL+  YS+      A  LF+ + P  D+ SWN+MISGL +             
Sbjct: 148 WNVFVAASLIHMYSRFGFTGIARSLFDDM-PFRDMGSWNAMISGLIQ------------- 193

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
                 + N+ ++L+    +    +K+ F      +   + MY   G L +A  + + I 
Sbjct: 194 ------NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIP 247

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D   WN +I    QNG   EAI+ +K M + +   P+  T V+++ A  ++    +G
Sbjct: 248 -VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 306

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
             +HG  +K+ + LD  V   LI +YG+C  +  A ++F      +  TWN +IS    +
Sbjct: 307 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 366

Query: 551 KAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
               + L+LF  +  E   P+ ++ VS+LSAC+                H GF E     
Sbjct: 367 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACS----------------HSGFVEEGKWC 410

Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSH 667
             L+  Y    S   +  M+   G  G    A +   +M    ++P  S   +LL AC  
Sbjct: 411 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM---PLQPDASIWGALLGACRI 467

Query: 668 SGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
            G ++ G ++ ++ L E D +    ++V + ++    GK +
Sbjct: 468 HGNIELG-KFASDRLFEVDSK-NVGYYVLLSNIYANVGKWE 506



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 192/413 (46%), Gaps = 52/413 (12%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
            + +H L + AG +    +    VN+YA  GD++ S CTF  +   D  +WN+++S  +H
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N +  + +  F ++    E   +      V   AC G L  G+ IH    KLG++ + +V
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDFYTFPPV-LKAC-GTLVDGRKIHCWAFKLGFQWNVFV 152

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           +   SLI MYS+ G    A   F  M  +D+ SWNA+I G   NG   +A D+L EM+L 
Sbjct: 153 AA--SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL- 209

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             ++ +  TVV+++ +                                +D Y+K   L  
Sbjct: 210 EGIKMNFVTVVSILPV-------------------------------FVDMYAKLGLLDS 238

Query: 332 AELLFNAIAPMNDLVSWNSMISGLFK-----------EMLYLCSQF--SFSTLLAILPSC 378
           A  +F  I P+ D++SWN++I+G  +           +M+  C +   +  T ++ILP+ 
Sbjct: 239 AHKVFE-IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 297

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               +L+ G  IH   +K     +      L+ +Y  CG LV A SL  ++   S  + W
Sbjct: 298 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-W 356

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           N +I     +GH ++ +K F  M   +   PD VT V+++SAC +     EGK
Sbjct: 357 NAIISCHGIHGHAEKTLKLFGEML-DEGVKPDHVTFVSLLSACSHSGFVEEGK 408



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 200/458 (43%), Gaps = 54/458 (11%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH-FFGEMVEEG 68
           ST L+  Y+N+     S   F +   KDV  WN+MI+A V N      +  F+  ++   
Sbjct: 54  STRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSE 113

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           IR D  T   ++ A      L  GR +HC + K G   +  +    ++MY++ G    + 
Sbjct: 114 IRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIAR 170

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F  M   D  SWN ++SG + N    + L    EM   G + + V++           
Sbjct: 171 SLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTV----------- 219

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
                                 VS+    + MY++ G +++A + F  +  KDV+SWN +
Sbjct: 220 ----------------------VSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTL 257

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G+A NG   EA ++   M+  + + P+  T V+++   A    L++G  +HG  I+  
Sbjct: 258 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTN 317

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
           L  D+ +   L+D Y K   L  A  LF  + P    V+WN++IS             LF
Sbjct: 318 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQV-PQESSVTWNAIISCHGIHGHAEKTLKLF 376

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIGVNALMHMYI 414
            EML    +    T +++L +C+    +E GK   C++L  + G   +      ++ +  
Sbjct: 377 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK--WCFRLMQEYGIKPSLKHYGCMVDLLG 434

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
             G L  A+  ++ +    D S W  ++ AC  +G+ +
Sbjct: 435 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 34/406 (8%)

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +S     F K +H   +  G   +      L+++Y N GD+  +     +I    D   W
Sbjct: 27  DSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYAW 85

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I A   NGHF EAI  F  +       PD  T   V+ ACG L    +G+ +H  A 
Sbjct: 86  NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRKIHCWAF 142

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           K     +  V  +LI MY R      A ++F+     ++ +WN MIS   QN    +AL+
Sbjct: 143 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 202

Query: 559 LFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           +   +  E    N +++VSIL     +               LG  +++     ++ +  
Sbjct: 203 VLDEMRLEGIKMNFVTVVSILPVFVDMYA------------KLGLLDSAHKVFEIIPV-- 248

Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFH--EMCNSGIRPTKSSVISLLSACSHSGLVDE 673
             K   +W+++I+ Y  +G   EAIE++   E C   I P + + +S+L A +H G + +
Sbjct: 249 --KDVISWNTLITGYAQNGLASEAIEVYKMMEECKE-IIPNQGTWVSILPAYAHVGALQQ 305

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
           G++ +  +++  ++  +     C++D+ G+ G+L +A      +P Q     W A++S  
Sbjct: 306 GMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCH 363

Query: 734 SHHGDT-KMGKQVAELLFK-LEPENVGYYISLS----NMYVALGRW 773
             HG   K  K   E+L + ++P++V +   LS    + +V  G+W
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 43/356 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++  + SL+  YS   +   + +LF +   +D+ +WNAMI+  ++N      L   
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM  EGI+ +  T++                               S+  VFV+MYAK 
Sbjct: 205 DEMRLEGIKMNFVTVV-------------------------------SILPVFVDMYAKL 233

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV-SLSSA 180
           G L+S+   F  +   D +SWNT+++G   N    + +  ++ M    E   N  +  S 
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A A +G L  G  IH   IK        V V   LI +Y +CG +  A   F+ +  +
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLD--VFVATCLIDVYGKCGRLVDAMSLFYQVPQE 351

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG--- 297
             V+WNAII    ++G  E+   L  EM L   V+PD  T V+L+S C+ S  + EG   
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEM-LDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 410

Query: 298 -RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            R +  Y I+  L +       ++D   ++  L  A      +    D   W +++
Sbjct: 411 FRLMQEYGIKPSLKH----YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 462


>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
 gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
 gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
 gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
 gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 681

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 180/598 (30%), Positives = 295/598 (49%), Gaps = 73/598 (12%)

Query: 252 FALNGKFEEAFDLLHEMQLMRS--VEPDIA--TVVTLISLCADSLLLREGRSVHGYAIRR 307
            A +G   +AF     ++L  S  V  D+   +  +L+S C D      G  VH + I  
Sbjct: 13  LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL 362
            + Y  +++  L+ FYS  N  ++A+ +      ++ L  WN +I+      LF+E++  
Sbjct: 73  GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPL-PWNVLIASYAKNELFEEVIAA 131

Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
             +           T  ++L +C     + FG+ +H       + ++    NAL+ MY  
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKR 191

Query: 416 CGDLVAAFSLLQR------ISHNSDTSC----------------------------WNIV 441
             ++  A  L  R      +S N+  +C                            WNI+
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
              C Q G++  A+     M +    S D V ++  + AC  +     GK +HGLA+ S 
Sbjct: 252 SGGCLQTGNYVGALGLISRM-RNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSS 310

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ-NKAEVRALELF 560
                 V+N LITMY +C+D++ A  VF      +LCTWN +IS ++Q NK+E  A  L 
Sbjct: 311 YDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE-EASHLL 369

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG-FQENSFISSALLDMYSN 616
           R +    F+PN I++ SIL  C ++  L+HGK+ H ++     F++ + + ++L+D+Y+ 
Sbjct: 370 REMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAK 429

Query: 617 C---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
                           +    ++S+I  YG  G+G  A+ LF EM  SGI+P   +V+++
Sbjct: 430 SGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAV 489

Query: 662 LSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQP 721
           LSACSHS LV EG + +  M  EY +RP  +H  C+VD+ GR+G L +A + I N+P +P
Sbjct: 490 LSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKP 549

Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
               W  +L+AC  HG+T++GK  AE L +++PEN GYY+ ++NMY A G W    E+
Sbjct: 550 SGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEV 607



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 234/520 (45%), Gaps = 60/520 (11%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
           ++SA   +     G  VH   I +G+   S L    V  Y+     N ++          
Sbjct: 49  LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108

Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
            + WN +++    N   E+ +  ++ M   G + D  +  S + A     ++++G+V+H 
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
                 Y+ S YV   N+LISMY +  ++  A R F  M  +D VSWNA+I+ +A  G +
Sbjct: 169 SIEVSSYKSSLYV--CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226

Query: 259 EEAFDLLHEMQL--------------------------------MRSVEPDIATVVTLIS 286
            EAF+L  +M                                  MR+    +  V  +I 
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286

Query: 287 LCADSLL--LREGRSVHGYAIRRLLGYDLL--MMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           L A SL+  +R G+ +HG AI     YD +  + N+L+  YSK   L  A ++F      
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHS--SYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEE- 343

Query: 343 NDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
           N L +WNS+ISG            L +EML    Q +  TL +ILP C    +L+ GK  
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403

Query: 391 HCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
           HC+ L+   F + T+  N+L+ +Y   G +VAA  +   +S   D   +  +I      G
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQG 462

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
               A+  FK MT +    PD VT+V V+SAC + +L  EG+ L  + ++   G+   +Q
Sbjct: 463 EGGVALALFKEMT-RSGIKPDHVTVVAVLSACSHSKLVHEGERLF-MKMQCEYGIRPCLQ 520

Query: 510 N--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
           +   ++ +YGR   +  A  +  +  Y  +  TW  +++A
Sbjct: 521 HFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 225/503 (44%), Gaps = 59/503 (11%)

Query: 35  NKDVV---TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQ 91
           N D++    WN +I +  +N      +  +  MV +GIR D+ T   ++ A  +   +  
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162

Query: 92  GRVVHCLSIKAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           GRVVH  SI+      S  +CN  ++MY +  ++  +   F  M   D VSWN +++   
Sbjct: 163 GRVVHG-SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221

Query: 151 HNNYPEKCLLYFREMGWSGEQA-----------------------------------DNV 175
                 +    F +M +SG +                                    D V
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281

Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           ++   + A + +G +  GK IH L I   Y+     +V N+LI+MYS+C D+  A   F 
Sbjct: 282 AMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGID--NVRNTLITMYSKCKDLRHALIVFR 339

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
                 + +WN+II G+A   K EEA  LL EM L+   +P+  T+ +++ LCA    L+
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREM-LVAGFQPNSITLASILPLCARIANLQ 398

Query: 296 EGRSVHGYAIRRLLGYDLLMM-NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            G+  H Y +RR    D  M+ NSL+D Y+KS  +  A+ + + ++   D V++ S+I G
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK-RDEVTYTSLIDG 457

Query: 355 ------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSN 401
                       LFKEM     +    T++A+L +C+  + +  G+ +    Q + G   
Sbjct: 458 YGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRP 517

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                + ++ +Y   G L  A  ++  + +    + W  ++ AC  +G+ Q      + +
Sbjct: 518 CLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKL 577

Query: 462 TQQQNASPDSVTLV-NVISACGN 483
            + +  +P    L+ N+ +A G+
Sbjct: 578 LEMKPENPGYYVLIANMYAAAGS 600



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 164/338 (48%), Gaps = 13/338 (3%)

Query: 23  FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
           FE    +++      V+TWN +   C++    V  L     M       D   ++I + A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289

Query: 83  LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSW 142
            + +  ++ G+ +H L+I +      ++ N  + MY+KC DL  +   F         +W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349

Query: 143 NTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIK 202
           N+I+SG    N  E+     REM  +G Q ++++L+S +   A +  L +GK  H   ++
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409

Query: 203 LG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
              ++D  Y  + NSL+ +Y++ G I AA++    M+ +D V++ ++IDG+   G+   A
Sbjct: 410 RKCFKD--YTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVA 467

Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH-----GYAIRRLLGYDLLMM 316
             L  EM     ++PD  TVV ++S C+ S L+ EG  +       Y IR  L +     
Sbjct: 468 LALFKEMT-RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH----F 522

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           + ++D Y ++  L+KA+ + + +       +W ++++ 
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 168/546 (30%), Positives = 277/546 (50%), Gaps = 84/546 (15%)

Query: 313 LLMMNSLMDFYSKS-----------NSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
           +L  N L D Y+ S           ++L  A  +F+ I P  +L SWN +I  L      
Sbjct: 162 MLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQI-PQPNLYSWNILIRALATSSDP 220

Query: 356 ------FKEML----YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                 F  ML    +  ++F+F  L+    +         GK++H   +K  F ++   
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFTFPVLIK---AVAERRCFLVGKAVHGMAIKTSFGDDVFV 277

Query: 406 VNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           +N+L+H Y +CG L  A+ + + I  +N D   WN ++    Q G+  +A+  F+ M + 
Sbjct: 278 LNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERM-RN 336

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC----- 519
           +   P++VT+V+V+SAC        G+ +     ++ M ++  V NA I M+ +C     
Sbjct: 337 EGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEI 396

Query: 520 ----------RDIKSASTV----------------FESCYNCNLCTWNCMISAFSQNKAE 553
                     RD+ S +T+                F+S    ++  WN +IS + Q+   
Sbjct: 397 ARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRP 456

Query: 554 VRALELFRHLEF-----EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
             AL +FR L+       P++++++S LSAC QLG +  G+ IHG++     Q N  +++
Sbjct: 457 KEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLAT 516

Query: 609 ALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
           +L+DMYS                 K    WS+MI+    HG+G  AIELF +M  + ++P
Sbjct: 517 SLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKP 576

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              +  +LL ACSHSGLVDEG + ++ M   Y V P+T+H+ C+VD+LGR+G L+EA +F
Sbjct: 577 NSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF 636

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I+ +P+ P   VWGA+L AC  HG+ ++ ++    L ++EP N G Y+ LSN+Y   G W
Sbjct: 637 IEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDW 696

Query: 774 KDAVEI 779
           +   E+
Sbjct: 697 EGVSEL 702



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 224/519 (43%), Gaps = 65/519 (12%)

Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
           K IHA  ++      PY +      + +S    ++ A + F  +   ++ SWN +I   A
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
            +    ++  +   M       P+  T   LI   A+      G++VHG AI+   G D+
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275

Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMISG------------LFKEML 360
            ++NSL+ FY+    L  A L+F  I   N D+VSWNSM++G            LF+ M 
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                 +  T+++++ +C    +L  G+ +  +  +     N    NA + M++ CG++ 
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395

Query: 421 AAFSLLQRISH------------------------------NSDTSCWNIVIVACTQNGH 450
            A  L   +                                  D   WN++I    Q+G 
Sbjct: 396 IARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGR 455

Query: 451 FQEAIKTFKSMT-QQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
            +EA+  F+ +   +  A PD VTL++ +SAC  L     G+ +HG   K  + L+  + 
Sbjct: 456 PKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLA 515

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFE 566
            +LI MY +  D++ A  VF S  N ++  W+ MI+  + +     A+ELF   +  + +
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVK 575

Query: 567 PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSM 626
           PN ++  ++L AC+  G++  GK++        F E       +  +Y        +S M
Sbjct: 576 PNSVTFTNLLCACSHSGLVDEGKRL--------FDE-------MERVYGVVPKTKHYSCM 620

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
           +   G  G   EA++    M    + P+ S   +LL AC
Sbjct: 621 VDVLGRAGHLEEALKFIEGM---PLAPSASVWGALLGAC 656



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 129/536 (24%), Positives = 239/536 (44%), Gaps = 63/536 (11%)

Query: 6   HLPTSTSLL---TAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           H P + S L    A+S+ S  + +  +F +    ++ +WN +I A   +   +  +  F 
Sbjct: 169 HDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFI 228

Query: 63  EMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M+ +     +  T  +++ A+ +  C   G+ VH ++IK     D  + N  ++ YA C
Sbjct: 229 RMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASC 288

Query: 122 GDLNSSECTFSGMHC--ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           G L+ +   F  +     D VSWN++++G +   YP+K L  F  M   G   + V++ S
Sbjct: 289 GHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVS 348

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPY----VSVTNSLISMYSQCGDIEAAERAFW 235
            ++A A    L+ G+ +        Y D       ++V N+ I M+ +CG++E A   F 
Sbjct: 349 VMSACAKTMNLTLGRKV------CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFD 402

Query: 236 GMTCKDVVSWNAIIDGFA-------------------------------LNGKFEEAFDL 264
            M  +DVVSW  IIDG+A                                +G+ +EA  +
Sbjct: 403 NMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAI 462

Query: 265 LHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
             E+QL +S   PD  T+++ +S CA    +  G  +HGY  +  +  +  +  SL+D Y
Sbjct: 463 FRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMY 522

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
           SKS  + KA  +F++I    D+  W++MI+G            LF +M     + +  T 
Sbjct: 523 SKSGDVEKAIEVFHSIGN-KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTF 581

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
             +L +C+    ++ GK +     ++ G    T   + ++ +    G L  A   ++ + 
Sbjct: 582 TNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMP 641

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLE 485
                S W  ++ AC  +G+ + A K    + + +  +  + V L N+ +  G+ E
Sbjct: 642 LAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWE 697


>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
 gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
          Length = 526

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/491 (31%), Positives = 257/491 (52%), Gaps = 48/491 (9%)

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
           R+  G D  + NSL+D Y+K   + +A  +F ++ P   +VSWN +I+G  +E       
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL-PSVTIVSWNILITGFGQE------- 52

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQL--KLGFSNNTIGVNALMHMYINCGDLVAAF 423
                      SC         K++    L  + GF  N +  + L+   I   D+ +A 
Sbjct: 53  ----------GSC--------AKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSAR 94

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
           ++  +IS  S T+ WN ++    Q    Q+ I+ F+ M Q QN  PD  TL  ++S+C  
Sbjct: 95  AMFDKISRPSVTT-WNTLLSGYCQEEQHQDTIELFRRM-QHQNVQPDRTTLAVILSSCSK 152

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
           L +   G+ +H  +++ L+  D  V + L+ MY +C  I  A ++F      ++  WN +
Sbjct: 153 LGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSI 212

Query: 544 ISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           IS  + +     A + F+ +      P E S  S++++C++L  + HG+QIH  V   G+
Sbjct: 213 ISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGY 272

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
            +N ++ SAL+DMY+ C               K+  AW+ MI  Y  +G G +A+ELF  
Sbjct: 273 DQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEY 332

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M  +  +P   + I++L+ CSHSGLVD+ + ++N+M   Y + P  EH+ C++D LGR+G
Sbjct: 333 MLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAG 392

Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
           +  E    I  +P +  P +W  +L+AC  H + ++GK  AE LF+++P+N   Y+ LSN
Sbjct: 393 RFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSN 452

Query: 766 MYVALGRWKDA 776
           +Y +LGR  DA
Sbjct: 453 IYASLGRHGDA 463



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 210/471 (44%), Gaps = 78/471 (16%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V NSLI MY++C +++ A + F  +    +VSWN +I GF   G   +A ++L  MQ   
Sbjct: 10  VGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQ-EA 68

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
             EP+  T   L++ C       + R VH                              A
Sbjct: 69  GFEPNEVTYSNLLASCI------KARDVH-----------------------------SA 93

Query: 333 ELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNS 380
             +F+ I+  + + +WN+++SG            LF+ M +   Q   +TL  IL SC+ 
Sbjct: 94  RAMFDKISRPS-VTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 152

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
              L+FG+ +H   ++    N+    + L+ MY  CG +  A S+  +++   D  CWN 
Sbjct: 153 LGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER-DVVCWNS 211

Query: 441 VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
           +I   T +   +EA   FK M ++    P   +  ++I++C  L     G+ +H   +K 
Sbjct: 212 IISGLTIHSLNKEAFDFFKQM-RENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKD 270

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
               +  V +ALI MY +C ++  A   F++    N+  WN MI  ++QN    +A+ELF
Sbjct: 271 GYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELF 330

Query: 561 RHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            ++   E +P+ ++ +++L+ C+  G++         +      ENS+    L + Y   
Sbjct: 331 EYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM------ENSYGIIPLAEHY--- 381

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI---SLLSAC 665
                 + +I A G  G+  E   L H+M      P K   I    LL+AC
Sbjct: 382 ------TCLIDALGRAGRFVEVEALIHKM------PCKDDPIIWEVLLAAC 420



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 189/385 (49%), Gaps = 12/385 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +  T ++LL +        S+ A+F +     V TWN +++   +       +  F
Sbjct: 69  GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 128

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  + ++ D TTL +I+S+ +++  L  GR VH  S++  +  D  + +  V+MY+KC
Sbjct: 129 RRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKC 188

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F+ M   D V WN+I+SG   ++  ++   +F++M  +G      S +S +
Sbjct: 189 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 248

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + + L  + +G+ IHA  +K GY+ + YV   ++LI MY++CG+++ A   F  M  K+
Sbjct: 249 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVG--SALIDMYAKCGNMDDARLFFDTMMMKN 306

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           +V+WN +I G+A NG  ++A +L  E  L    +PD  T + +++ C+ S L+ +  +  
Sbjct: 307 IVAWNEMIHGYAQNGLGDKAVELF-EYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF 365

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
               + Y I  L  +       L+D   ++    + E L + +   +D + W  +++   
Sbjct: 366 NSMENSYGIIPLAEH----YTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACV 421

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSP 381
                   + +   L  I P   SP
Sbjct: 422 VHHNAELGKCAAEHLFRIDPKNPSP 446



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 57/395 (14%)

Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLL 160
           + G  +D  + N  ++MY KC +++ +   F  +     VSWN +++G        K + 
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60

Query: 161 YFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISM 220
               M  +G + + V+ S+ +A  +C+                                 
Sbjct: 61  VLSLMQEAGFEPNEVTYSNLLA--SCI--------------------------------- 85

Query: 221 YSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
             +  D+ +A   F  ++   V +WN ++ G+    + ++  +L   MQ  ++V+PD  T
Sbjct: 86  --KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQ-HQNVQPDRTT 142

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +  ++S C+   +L  GR VH  ++R LL  D+ + + L+D YSK   +  A  +FN + 
Sbjct: 143 LAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT 202

Query: 341 PMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
              D+V WNS+ISGL            FK+M       + S+  +++ SC+   S+  G+
Sbjct: 203 E-RDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGR 261

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            IH   +K G+  N    +AL+ MY  CG++  A  L        +   WN +I    QN
Sbjct: 262 QIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDA-RLFFDTMMMKNIVAWNEMIHGYAQN 320

Query: 449 GHFQEAIKTFKSM--TQQQNASPDSVTLVNVISAC 481
           G   +A++ F+ M  T+Q+   PD+VT + V++ C
Sbjct: 321 GLGDKAVELFEYMLTTEQK---PDAVTFIAVLTGC 352


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 201/703 (28%), Positives = 321/703 (45%), Gaps = 98/703 (13%)

Query: 174 NVSLSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           NV L+S V     L    LS G +  A  +       P V   N +++ Y++ G +  A 
Sbjct: 53  NVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAV 112

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA-- 289
             F  M  +DV SWN I+ G+  +G+F  A D+   M+      P+  T   ++  C   
Sbjct: 113 ELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGAL 172

Query: 290 ----------------DS------------LLLREGR-SVHGYAIRRLLGYDLLMMNSLM 320
                           DS            +L+R G          R+    ++  NS++
Sbjct: 173 GWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSML 232

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQF-------SF 368
             Y+KS+ +  A  +F ++ P  D+VSWN +IS L K     E L +             
Sbjct: 233 VGYAKSHGVDHALEIFKSM-PERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDS 291

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           +T  + L +C    SLE+GK +H   ++     +    +A++ +Y  CG    A  +   
Sbjct: 292 TTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSS 351

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +   +  S W ++I    Q G F E+++ F  M  +  A  D   L  +IS C N     
Sbjct: 352 LRDRNSVS-WTVLIGGFLQYGCFSESVELFNQMRAELMAV-DQFALATLISGCCNTMDIC 409

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRC---------------RDIKS--------- 524
            G  LH L LKS       V N+LI+MY +C               RDI S         
Sbjct: 410 LGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYS 469

Query: 525 -------ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIV 573
                  A   F+     N+ TWN M+ A+ Q+ AE   L+++  +  E    P+ ++ V
Sbjct: 470 QVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYV 529

Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
           ++   C  +G  + G QI GH   +G   ++ + +A++ MYS C               K
Sbjct: 530 TLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRK 589

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
              +W++MI+ Y  HG G +AIE+F ++ N G +P   S +++LS CSHSGLV+EG  Y+
Sbjct: 590 DLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYF 649

Query: 679 NNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGD 738
           + M  ++++ P  EH  C+VD+LGR+G L EA   I  +P++P   VWGA+LSAC  HG+
Sbjct: 650 DMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGN 709

Query: 739 TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             + +  A+ LF L+    G Y+ L+ MY   G+  D+ ++ K
Sbjct: 710 NDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRK 752



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 181/705 (25%), Positives = 301/705 (42%), Gaps = 128/705 (18%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N+ +N YAK G L+ +   F  M   D  SWNTIMSG   +      L  F  M  +G+ 
Sbjct: 96  NIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDS 155

Query: 172 ADNVSLSSAVAASACLGELSYGKV-IHALGI--KLGYEDSPYVSVTNSLISMYSQCGDIE 228
             N      V  S   G L + +V +  LG+  K   +D P   V  +L+ M  +CG ++
Sbjct: 156 LPNAFTFGCVMKSC--GALGWHEVALQLLGLLSKFDSQDDP--DVQTALVDMLVRCGAMD 211

Query: 229 AAERA-------------------------------FWGMTCKDVVSWNAIIDGFALNGK 257
            A +                                F  M  +DVVSWN +I   + +G+
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGR 271

Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
             EA D++ +M   + V PD  T  + ++ CA    L  G+ +H   IR L   D  + +
Sbjct: 272 VREALDMVVDMH-GKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM---LYL 362
           ++++ Y+K     +A+ +F+++   N  VSW  +I G            LF +M   L  
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNS-VSWTVLIGGFLQYGCFSESVELFNQMRAELMA 389

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL--- 419
             QF+ +TL++    C +   +  G  +H   LK G +   +  N+L+ MY  CG+L   
Sbjct: 390 VDQFALATLIS---GCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA 446

Query: 420 ------------------VAAFSLLQRISH---------NSDTSCWNIVIVACTQNGHFQ 452
                             + A+S +  I+            +   WN ++ A  Q+G  +
Sbjct: 447 ELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE 506

Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
           + +K +  M  +++  PD VT V +   C ++     G  + G  +K  + LDT V NA+
Sbjct: 507 DGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAV 566

Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNE 569
           ITMY +C  I  A   F+     +L +WN MI+ +SQ+    +A+E+F  +     +P+ 
Sbjct: 567 ITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDY 626

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISA 629
           IS V++LS C+  G++  GK      F+    +     S  L+ +         S M+  
Sbjct: 627 ISYVAVLSGCSHSGLVEEGK------FYFDMMKRDHNISPGLEHF---------SCMVDL 671

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR- 688
            G  G   EA  L  EM    ++PT     +LLSAC   G         NN L E   + 
Sbjct: 672 LGRAGHLIEAKNLIDEM---PMKPTAEVWGALLSACKTHG---------NNDLAELAAKH 719

Query: 689 ------PETEHHVCIVDMLGRSGKLQEAYE---FIKNLPIQPKPG 724
                 P +  ++ +  M   +GK  ++ +    +++  I+  PG
Sbjct: 720 LFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPG 764



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 227/483 (46%), Gaps = 47/483 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S+L  Y+     + +L +F     +DVV+WN +I+A  ++  V   L    +M  +G+R 
Sbjct: 230 SMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRP 289

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           DSTT    ++A  +++ L+ G+ +H   I+     D  + +  V +YAKCG    ++  F
Sbjct: 290 DSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVF 349

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
           S +   ++VSW  ++ G L      + +  F +M       D  +L++ ++      ++ 
Sbjct: 350 SSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDIC 409

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF----------W------ 235
            G  +H+L +K G+  +  V V+NSLISMY++CG+++ AE  F          W      
Sbjct: 410 LGSQLHSLCLKSGHTRA--VVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITA 467

Query: 236 ---------------GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIAT 280
                           M+ ++V++WNA++  +  +G  E+   +  +M   + V PD  T
Sbjct: 468 YSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVT 527

Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
            VTL   CAD    + G  + G+ ++  L  D  ++N+++  YSK   +S+A   F+ ++
Sbjct: 528 YVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLS 587

Query: 341 PMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK 388
              DLVSWN+MI+G            +F ++L   ++  + + +A+L  C+    +E GK
Sbjct: 588 -RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK 646

Query: 389 -SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
                 +     S      + ++ +    G L+ A +L+  +        W  ++ AC  
Sbjct: 647 FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKT 706

Query: 448 NGH 450
           +G+
Sbjct: 707 HGN 709



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/485 (22%), Positives = 205/485 (42%), Gaps = 85/485 (17%)

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR------ 428
           L SC +  +L   +++H   + +G ++     N L+H Y++CG L  A +LL+       
Sbjct: 32  LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91

Query: 429 -ISHN------------------------SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
            I+HN                         D + WN ++    Q+G F  A+  F SM Q
Sbjct: 92  VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151

Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
             ++ P++ T   V+ +CG L        L GL  K     D  VQ AL+ M  RC  + 
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMD 211

Query: 524 SAST-------------------------------VFESCYNCNLCTWNCMISAFSQNKA 552
            AS                                +F+S    ++ +WN +ISA S++  
Sbjct: 212 FASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGR 271

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL++   +      P+  +  S L+AC +L  L  GKQ+H  V       + +++SA
Sbjct: 272 VREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASA 331

Query: 610 LLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           ++++Y+ C               +++ +W+ +I  +  +G   E++ELF++M    +   
Sbjct: 332 MVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVD 391

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
           + ++ +L+S C ++  +  G Q ++  L+    R     +  ++ M  + G LQ A E I
Sbjct: 392 QFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN-SLISMYAKCGNLQNA-ELI 449

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
            N   +     W  M++A S  G+    +   E    +   NV  + ++   Y+  G  +
Sbjct: 450 FNFMAERDIVSWTGMITAYSQVGNIAKAR---EFFDDMSTRNVITWNAMLGAYIQHGAEE 506

Query: 775 DAVEI 779
           D +++
Sbjct: 507 DGLKM 511



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 151/322 (46%), Gaps = 35/322 (10%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            +++++  Y+    F+ +  +F    +++ V+W  +I   ++  C    +  F +M  E 
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  D   L  ++S       +  G  +H L +K+G      + N  ++MYAKCG+L ++E
Sbjct: 388 MAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAE 447

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG------WS---------GEQAD 173
             F+ M   D VSW  +++         K   +F +M       W+         G + D
Sbjct: 448 LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEED 507

Query: 174 NVSLSSAVAAS-----------------ACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
            + + S +                    A +G    G  I    +K+G       SV N+
Sbjct: 508 GLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILD--TSVVNA 565

Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           +I+MYS+CG I  A +AF  ++ KD+VSWNA+I G++ +G  ++A ++  ++ L +  +P
Sbjct: 566 VITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDI-LNKGAKP 624

Query: 277 DIATVVTLISLCADSLLLREGR 298
           D  + V ++S C+ S L+ EG+
Sbjct: 625 DYISYVAVLSGCSHSGLVEEGK 646



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/346 (19%), Positives = 133/346 (38%), Gaps = 65/346 (18%)

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC----------RD-- 521
           L + + +CG        ++LH   +   +     +QN L+  Y  C          RD  
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 522 --------------------IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
                               +  A  +F      ++ +WN ++S + Q+   + AL++F 
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 562 HLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            +       PN  +   ++ +C  LG      Q+ G +     Q++  + +AL+DM   C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207

Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
                      A  +  K +  I+           PT     S+L   + S  VD  L+ 
Sbjct: 208 ----------GAMDFASKQFSRIK----------NPTIICRNSMLVGYAKSHGVDHALEI 247

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL---PIQPKPGVWGAMLSACS 734
           + +M E   V         ++  L +SG+++EA + + ++    ++P    + + L+AC+
Sbjct: 248 FKSMPERDVVSWNM-----VISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACA 302

Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
                + GKQ+   + +  P    Y  S +  +Y   G +K+A  +
Sbjct: 303 RLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRV 348


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 301/588 (51%), Gaps = 49/588 (8%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           N++I  YS    +  AE+ F     K+ +SWNA+I G+  +G   EAF+L  EMQ    +
Sbjct: 63  NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ-SDGI 121

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           +P+  T+ +++ +C   +LL  G  +HG+ I+     D+ ++N L+  Y++   +S+AE 
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LF  +    + V+W SM++G             F+++    +Q +  T  ++L +C S  
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           +   G  +HC  +K GF  N    +AL+ MY  C ++ +A +LL+ +  + D   WN +I
Sbjct: 242 ACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMI 300

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS--ACGNLELAFEGKSLHGLALKS 500
           V C + G   EA+  F  M  +++   D  T+ ++++  A    E+     S H L +K+
Sbjct: 301 VGCVRQGLIGEALSMFGRM-HERDMKIDDFTIPSILNCFALSRTEMKI-ASSAHCLIVKT 358

Query: 501 LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
                  V NAL+ MY +   + SA  VFE     ++ +W  +++  + N +   AL+LF
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLF 418

Query: 561 RHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
            ++      P++I   S+LSA  +L +L  G+Q+HG+    GF  +  ++++L+ MY+ C
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC 478

Query: 618 KS----NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
            S    N  ++SM           E  +L    C             L+   + +GL+++
Sbjct: 479 GSLEDANVIFNSM-----------EIRDLITWTC-------------LIVGYAKNGLLED 514

Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
             +Y+++M   Y + P  EH+ C++D+ GRSG   +  + +  + ++P   VW A+L+A 
Sbjct: 515 AQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAAS 574

Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
             HG+ + G++ A+ L +LEP N   Y+ LSNMY A GR  +A  + +
Sbjct: 575 RKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 33/497 (6%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLH 59
           GF   +     LL  Y+       +  LF ET    K+ VTW +M+T   +N      + 
Sbjct: 155 GFDLDVNVVNGLLAMYAQCKRISEAEYLF-ETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F ++  EG + +  T   +++A   ++  + G  VHC  +K+G   +  + +  ++MYA
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC ++ S+     GM   D VSWN+++ GC+      + L  F  M     + D+ ++ S
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333

Query: 180 AVAASA-CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            +   A    E+      H L +K GY  + Y  V N+L+ MY++ G +++A + F GM 
Sbjct: 334 ILNCFALSRTEMKIASSAHCLIVKTGY--ATYKLVNNALVDMYAKRGIMDSALKVFEGMI 391

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            KDV+SW A++ G   NG ++EA  L   M++   + PD     +++S  A+  LL  G+
Sbjct: 392 EKDVISWTALVTGNTHNGSYDEALKLFCNMRV-GGITPDKIVTASVLSASAELTLLEFGQ 450

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
            VHG  I+      L + NSL+  Y+K  SL  A ++FN++  + DL++W  +I G  K 
Sbjct: 451 QVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM-EIRDLITWTCLIVGYAKN 509

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
            L   +Q  F ++  +      PE                          ++ ++   GD
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHYA----------------------CMIDLFGRSGD 547

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--NASPDSVTLVN 476
            V    LL ++    D + W  ++ A  ++G+ +   +  K++ + +  NA P  V L N
Sbjct: 548 FVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVP-YVQLSN 606

Query: 477 VISACGNLELAFEGKSL 493
           + SA G  + A   + L
Sbjct: 607 MYSAAGRQDEAANVRRL 623



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 227/475 (47%), Gaps = 19/475 (4%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           T  +++ AYSN      +  LF     K+ ++WNA+I+   ++   V   + F EM  +G
Sbjct: 61  TWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDG 120

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           I+ +  TL  ++   T +  L +G  +H  +IK G   D ++ N  + MYA+C  ++ +E
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180

Query: 129 CTFSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
             F  M    + V+W ++++G   N +  K +  FR++   G Q++  +  S + A A +
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
                G  +H   +K G++ + YV   ++LI MY++C ++E+A     GM   DVVSWN+
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALLEGMEVDDVVSWNS 298

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIR 306
           +I G    G   EA  +   M   R ++ D  T+ ++++  A S   ++   S H   ++
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMH-ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVK 357

Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLY 361
                  L+ N+L+D Y+K   +  A  +F  +    D++SW ++++     G + E L 
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE-KDVISWTALVTGNTHNGSYDEALK 416

Query: 362 LCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
           L        +        ++L +      LEFG+ +H   +K GF ++    N+L+ MY 
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            CG L  A  +   +    D   W  +IV   +NG  ++A + F SM      +P
Sbjct: 477 KCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITP 530



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 224/478 (46%), Gaps = 25/478 (5%)

Query: 90  KQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           K GRV     +   M   D    N  +  Y+    L+ +E  F      +T+SWN ++SG
Sbjct: 40  KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              +    +    F EM   G + +  +L S +     L  L  G+ IH   IK G++  
Sbjct: 100 YCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD 159

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTC-KDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             V+V N L++MY+QC  I  AE  F  M   K+ V+W +++ G++ NG   +A +   +
Sbjct: 160 --VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           ++     + +  T  ++++ CA     R G  VH   ++     ++ + ++L+D Y+K  
Sbjct: 218 LR-REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYL----------CSQFSFSTLL 372
            +  A  L   +  ++D+VSWNSMI      GL  E L +             F+  ++L
Sbjct: 277 EMESARALLEGM-EVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
                  S   ++   S HC  +K G++   +  NAL+ MY   G + +A  + + +   
Sbjct: 336 NCFAL--SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK 393

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  ++   T NG + EA+K F +M +    +PD +   +V+SA   L L   G+ 
Sbjct: 394 -DVISWTALVTGNTHNGSYDEALKLFCNM-RVGGITPDKIVTASVLSASAELTLLEFGQQ 451

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
           +HG  +KS       V N+L+TMY +C  ++ A+ +F S    +L TW C+I  +++N
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509


>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 181/635 (28%), Positives = 315/635 (49%), Gaps = 82/635 (12%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           TN  IS Y++   ++ A + F  M  + VVSWN +I  ++ +G+F EA  L++ M   RS
Sbjct: 75  TNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH--RS 132

Query: 274 -VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            ++   +T  +++S+CA    LR+G+ +H   ++       L+ ++L+ FY+    + +A
Sbjct: 133 HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 192

Query: 333 ELLFNAIA------------------------------PMNDLVSWNSMISGLFK----- 357
             +F+ +                               P  D+V+W ++ISG  K     
Sbjct: 193 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 252

Query: 358 ----EMLYLC--------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
               EM  L         ++F+F     ++ +C     L  G+++H   +K G   +   
Sbjct: 253 GKALEMFRLMMRSGETTPNEFTFD---CVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 309

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+  Y  C  +  A  + + +  N   +  N +I      G  ++A   F  MT+  
Sbjct: 310 GGALVEFYCECEAIDDALRVCKGVV-NPCLNALNSLIEGLISMGRIEDAELVFNGMTEM- 367

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             +P S  L+    A G  ++    +    +  +++        N +I++Y R  +I  A
Sbjct: 368 --NPVSYNLMIKGYAVGG-QMDDSKRLFEKMPCRTIFS-----SNTMISVYSRNGEIDKA 419

Query: 526 STVFESCYN-CNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQ 581
             +FE   N  +  TWN MIS +  +     AL+L+     L  +    +  ++  AC+ 
Sbjct: 420 LELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSC 479

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSM 626
           LG L+ G+ +H H+    F+ N ++ ++L+DMYS C S                AAW+++
Sbjct: 480 LGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTAL 539

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+ + YHG G EAI LF  M   G+ P  ++ + +LSACS +GLV+EG++ +++M   Y 
Sbjct: 540 INGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYS 599

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           V P  EH+ C+VD+LGRSG ++EA EFIK +P++    VWGA+LSAC    D ++G++VA
Sbjct: 600 VTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVA 659

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           E +F  +P+ +  Y+ LSN+Y  LGRW++ + + K
Sbjct: 660 EKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRK 694



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 155/636 (24%), Positives = 264/636 (41%), Gaps = 89/636 (13%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L+ + ++   ++ Y+  S  + +  LF +   + VV+WN MI++  ++      L     
Sbjct: 69  LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 128

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M    ++   +T   ++S   ++ CL+ G+++HCL +K+G  +   + +  +  YA C +
Sbjct: 129 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFE 188

Query: 124 LNSSE-------------------------------CTFSGMHCADTVSWNTIMSGCLHN 152
           +  +                                  F  M   D V+W T++SG   N
Sbjct: 189 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 248

Query: 153 -NYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            +   K L  FR M  SGE   N  +    V A   LG LS G+ +H L +K G E  P 
Sbjct: 249 GDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDP- 307

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            S+  +L+  Y +C  I+ A R   G+    + + N++I+G    G+ E+A  + + M  
Sbjct: 308 -SIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTE 366

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI-------RRLLG----YDLLMMNSL 319
           M  V  ++                     + GYA+       +RL        +   N++
Sbjct: 367 MNPVSYNLM--------------------IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTM 406

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +  YS++  + KA  LF       D V+WNSMISG            L+  M  L  Q +
Sbjct: 407 ISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQT 466

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            ST  A+  +C+   SL+ G+ +H   +K  F +N     +L+ MY  CG ++ A +   
Sbjct: 467 RSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFV 526

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            I  + + + W  +I     +G   EAI  F  M  +Q  +P+  T V V+SAC    L 
Sbjct: 527 SI-FSPNVAAWTALINGHAYHGLGSEAISLFDXMI-EQGLAPNGATFVGVLSACSRAGLV 584

Query: 488 FEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMIS 545
            EG K  H +     +         ++ + GR   I+ A    +      +   W  ++S
Sbjct: 585 NEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLS 644

Query: 546 A----FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
           A          E  A ++F    F+P  IS   ILS
Sbjct: 645 ACWFWMDLEVGERVAEKMF---SFDPKPISSYVILS 677



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 2/149 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F +++   TSL+  YS       +   F    + +V  W A+I     +      +  F 
Sbjct: 498 FESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFD 557

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M+E+G+  +  T + ++SA ++   + +G ++ H +     +          V++  + 
Sbjct: 558 XMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRS 617

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           G +  +E     M   AD V W  ++S C
Sbjct: 618 GHIREAEEFIKKMPLEADGVVWGALLSAC 646


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 185/606 (30%), Positives = 288/606 (47%), Gaps = 106/606 (17%)

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
           D +    L++ CA S   R+   VH   I+     +  + N L+D Y K   +  A  LF
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77

Query: 337 NAI------------------------------APMNDLVSWNSMISGL-----FKEML- 360
           + +                               P  D  SWNSMISG      F E L 
Sbjct: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137

Query: 361 ---------YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
                    +L +++SF + L+   +C   + L+ G  IH    +  + ++    +AL+ 
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALS---ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           MY  CG +  A S+   ++  S  S WN +I    QNG   EA+K F  M +     PD 
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVS-WNSLITCYEQNGPVDEALKIFVEMIKC-GVEPDE 252

Query: 472 VTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
           VTL +V+SAC  +    EG+ +H   +K      D  + NAL+ MY +C  I  A  +F+
Sbjct: 253 VTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFD 312

Query: 531 --------------SCYNC-----------------NLCTWNCMISAFSQNKAEVRALEL 559
                         S Y                   ++ TWN +I+  +QN     AL L
Sbjct: 313 MMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALIL 372

Query: 560 FRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ----ENS--FISSAL 610
           FR L+ E   P   +  ++L+AC  L  L+ G+Q H HV   GF+    E+S  F+ ++L
Sbjct: 373 FRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSL 432

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
           +DMY  C               K   +W++MI  Y  +G G +A+E+F +M  SG  P  
Sbjct: 433 IDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDH 492

Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
            ++I +L ACSH+GL+DEG  Y+ +M  ++ + P  +H+ C+VD+LGR+G L+EA   I+
Sbjct: 493 VTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIE 552

Query: 716 NLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            + +QP   VWG++L+AC  H + ++G+ V + L +++PEN G Y+ LSNMY     WK+
Sbjct: 553 EMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKN 612

Query: 776 AVEIGK 781
            V + K
Sbjct: 613 VVRVRK 618



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 254/567 (44%), Gaps = 92/567 (16%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +  + K G L+ +   F  M   D  SWN+++SG   +   ++ L+YF +M   G  
Sbjct: 89  NSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFL 148

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            +  S  SA++A A L +L  G  IH+L  +  Y    Y+   ++L+ MYS+CG +E A+
Sbjct: 149 VNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMG--SALVDMYSKCGRVEYAQ 206

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
             F  MT +  VSWN++I  +  NG  +EA  +  EM +   VEPD  T+ +++S CA  
Sbjct: 207 SVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEM-IKCGVEPDEVTLASVVSACATI 265

Query: 292 LLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
             ++EG+ +H   ++      DL++ N+L+D Y+K N +++A ++F+ + P+  +VS  S
Sbjct: 266 SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFD-MMPIRSVVSETS 324

Query: 351 MISGLFKEMLYLCSQFSFSTLLA------------------------------------- 373
           M+SG  K      +++ FS ++                                      
Sbjct: 325 MVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPT 384

Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGF-------SNNTIGVNALMHMYINCGDLV 420
                 +L +C +   L+ G+  H   LK GF       S+  +G N+L+ MY+ CG + 
Sbjct: 385 HYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVG-NSLIDMYMKCGSVE 443

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
               + Q +    D   WN +IV   QNG   +A++ F  M +   A PD VT++ V+ A
Sbjct: 444 NGCRVFQHMLE-KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEA-PDHVTMIGVLCA 501

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C +  L  EG+       +S+       Q+ L+ +                        +
Sbjct: 502 CSHAGLLDEGR----YYFRSMTA-----QHGLMPLKDH---------------------Y 531

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
            CM+    +      A  L   +  +P+ I   S+L+AC     ++ G+ +   +  +  
Sbjct: 532 TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVD- 590

Query: 601 QENSFISSALLDMYSNCKSNAAWSSMI 627
            ENS     L +MY+    N  W +++
Sbjct: 591 PENSGPYVLLSNMYA---ENRDWKNVV 614



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 192/421 (45%), Gaps = 48/421 (11%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           +L+ +   ++L+  YS     E + ++F E   +  V+WN++IT   +N  V   L  F 
Sbjct: 182 YLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFV 241

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKC 121
           EM++ G+  D  TL  +VSA   ++ +K+G+ +H   +K      D  L N  ++MYAKC
Sbjct: 242 EMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKC 301

Query: 122 GDLNSSECT-------------------------------FSGMHCADTVSWNTIMSGCL 150
             +N +                                  FS M   D ++WN +++GC 
Sbjct: 302 NRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCT 361

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY----- 205
            N   E+ L+ FR +        + +  + + A A L +L  G+  H+  +K G+     
Sbjct: 362 QNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYG 421

Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
           EDS  V V NSLI MY +CG +E   R F  M  KD VSWNA+I G+A NG   +A ++ 
Sbjct: 422 EDSD-VFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVF 480

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM-----MNSLM 320
            +M L     PD  T++ ++  C+ + LL EGR    Y  R +     LM        ++
Sbjct: 481 CKM-LESGEAPDHVTMIGVLCACSHAGLLDEGR----YYFRSMTAQHGLMPLKDHYTCMV 535

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNS 380
           D   ++  L +A+ L   ++   D + W S+++           ++    LL + P  + 
Sbjct: 536 DLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSG 595

Query: 381 P 381
           P
Sbjct: 596 P 596



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 229/511 (44%), Gaps = 55/511 (10%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
            S++ A++   + + ++ +F +    D  +WN+MI+   ++      L +F +M   G  
Sbjct: 89  NSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFL 148

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +  +    +SA   +  LK G  +H L  ++  ++D  + +  V+MY+KCG +  ++  
Sbjct: 149 VNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSV 208

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYP-EKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
           F  M     VSWN++++ C   N P ++ L  F EM   G + D V+L+S V+A A +  
Sbjct: 209 FDEMTVRSRVSWNSLIT-CYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISA 267

Query: 190 LSYGKVIHALGIK---------LG-------------------YEDSPYVSVTN--SLIS 219
           +  G+ IHA  +K         LG                   ++  P  SV +  S++S
Sbjct: 268 IKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVS 327

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
            Y++   ++ A   F  M  KDV++WNA+I G   NG+ EEA  +L  +    SV P   
Sbjct: 328 GYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEAL-ILFRLLKRESVWPTHY 386

Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLSKAE 333
           T   L++ CA+   L+ GR  H + ++    +      D+ + NSL+D Y K  S+    
Sbjct: 387 TFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGC 446

Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
            +F  +    D VSWN+MI G            +F +ML         T++ +L +C+  
Sbjct: 447 RVFQHMLE-KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHA 505

Query: 382 ESLEFGK-SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
             L+ G+        + G          ++ +    G L  A +L++ +S   D   W  
Sbjct: 506 GLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGS 565

Query: 441 VIVACTQNGHFQEAIKTFKSMTQ--QQNASP 469
           ++ AC  + + Q      K + +   +N+ P
Sbjct: 566 LLAACKVHRNIQLGEYVVKKLLEVDPENSGP 596



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 198/479 (41%), Gaps = 98/479 (20%)

Query: 349 NSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
           N ++  L  ++L+L S    S    +L  C    S      +H   +K  F++ T   N 
Sbjct: 4   NGLVKHLKGDLLFLDS----SPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNR 59

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +Y  CG +  A  L  R+   +  S WN +I A T++G   +A+  F+ M Q    S
Sbjct: 60  LIDVYGKCGCVDVARKLFDRMLERNIFS-WNSIICAFTKSGFLDDAVHIFEKMPQVDQCS 118

Query: 469 PDSVT------------------------LVN------VISACGNLELAFEGKSLHGLAL 498
            +S+                         LVN       +SAC  L+    G  +H L  
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +S    D  + +AL+ MY +C  ++ A +VF+     +  +WN +I+ + QN     AL+
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALK 238

Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG-FQENSFISSALLDMY 614
           +F  +     EP+E+++ S++SAC  +  ++ G+QIH  V     F+ +  + +ALLDMY
Sbjct: 239 IFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMY 298

Query: 615 SNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
           + C               +S  + +SM+S Y    K   A  +F  M    +        
Sbjct: 299 AKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN---- 354

Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPI 719
           +L++ C+ +G  +E L                                   +  +K   +
Sbjct: 355 ALIAGCTQNGENEEALIL---------------------------------FRLLKRESV 381

Query: 720 QPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL-------EPENVGYYISLSNMYVALG 771
            P    +G +L+AC++  D ++G+Q    + K        E  +V    SL +MY+  G
Sbjct: 382 WPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCG 440


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 159/528 (30%), Positives = 275/528 (52%), Gaps = 32/528 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAP 341
           +L+  C        G   H + ++  L  D  + NSL+  Y K    + +   +F+ +  
Sbjct: 65  SLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMF- 123

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
           + D +SW SM+SG            +F EM+    Q +  TL + + +C     +  G+ 
Sbjct: 124 VKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRC 183

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
            H   +  GF  N +  + L +MY    + V A  +   +    D  CW  V+ A ++N 
Sbjct: 184 FHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPE-PDVICWTAVLSAFSKND 242

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
            ++EA+  F +M + +   PD  T   V++ACGNL    +GK +HG  + + +G +  V+
Sbjct: 243 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 302

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
           ++L+ MYG+   ++ A  VF      N+ +W+ ++  + QN    +A+E+FR +E E + 
Sbjct: 303 SSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREME-EKDL 361

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNAA----- 622
               ++L AC  L  +R GK+IHG     G   N  + SAL+D+Y  S C   A+     
Sbjct: 362 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSK 421

Query: 623 --------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                   W++M+SA   +G+G EA+  F++M   GI+P   S I++L+AC H+GLV+EG
Sbjct: 422 MSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEG 481

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
             Y+  M + Y ++P TEH+ C++D+LGR+G  +EA   +     +    +WG +L  C+
Sbjct: 482 RNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPCA 541

Query: 735 HHGD-TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            + D + + +++A+ + +LEP+    Y+ LSNMY A+GR  DA++I K
Sbjct: 542 ANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRK 589



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 253/520 (48%), Gaps = 31/520 (5%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG-DLNSSECTFSGMHCADTVSWNTIMSGC 149
            G   H   +K+G+  D ++ N  +++Y K G D+  +   F GM   D +SW ++MSG 
Sbjct: 78  HGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGY 137

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           + +    K L  F EM   G Q +  +LSSAV A   LGE+  G+  H + I  G+E + 
Sbjct: 138 VASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNH 197

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
            +S T  L  MY    +   A R F  M   DV+ W A++  F+ N  +EEA  L + M 
Sbjct: 198 VISST--LAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 255

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
             + + PD +T  T+++ C +   L++G+ +HG  I   +G ++++ +SL+D Y KS S+
Sbjct: 256 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSV 315

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
            +A  +FN + P  ++VSW++++ G            +F+EM     +        +L +
Sbjct: 316 REARQVFNGM-PRKNIVSWSALLGGYCQNGEHEKAIEMFREM----EEKDLYCFGTVLKA 370

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C    ++  GK IH   ++ G   N I  +AL+ +Y   G +  A  +  ++S  +  + 
Sbjct: 371 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMIT- 429

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           WN ++ A  QNG  +EA+  F  M  ++   PD ++ + V++ACG+  L  EG++   L 
Sbjct: 430 WNAMLSALAQNGRGEEAVSFFNDMV-KKGIKPDYISFIAVLTACGHTGLVEEGRNYFALM 488

Query: 498 LKSL-MGLDTRVQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEV 554
            KS  +   T   + +I + GR    + A  + +   C N +   W  ++   + N    
Sbjct: 489 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRN-DASLWGVLLGPCAANTDAS 547

Query: 555 RALELF--RHLEFEPN-EISIVSILSACTQLGVLRHGKQI 591
              E    R +E EP   +S V + +    +G  RHG  +
Sbjct: 548 SIAERIAKRMMELEPKYHMSYVLLSNMYKAIG--RHGDAL 585



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 200/427 (46%), Gaps = 22/427 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           KD ++W +M++  V ++  V  L  F EMV  G++ +  TL   V A  ++  ++ GR  
Sbjct: 125 KDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCF 184

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-Y 154
           H + I  G   +  + +    MY    +   +   F  M   D + W  ++S    N+ Y
Sbjct: 185 HGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 244

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E   L++      G   D  +  + + A   L  L  GK IH   I  G   +  V V 
Sbjct: 245 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN--VVVE 302

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           +SL+ MY + G +  A + F GM  K++VSW+A++ G+  NG+ E+A ++  EM+     
Sbjct: 303 SSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREME----- 357

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E D+    T++  CA    +R G+ +HG  +RR    ++++ ++L+D Y KS  +  A  
Sbjct: 358 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASR 417

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +++ ++  N +++WN+M+S L            F +M+    +  + + +A+L +C    
Sbjct: 418 VYSKMSVRN-MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTG 476

Query: 383 SLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            +E G++      K  G    T   + ++ +    G    A +LL R    +D S W ++
Sbjct: 477 LVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVL 536

Query: 442 IVACTQN 448
           +  C  N
Sbjct: 537 LGPCAAN 543



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 163/330 (49%), Gaps = 17/330 (5%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMN 87
           +F E    DV+ W A+++A  +N      L  F  M   +G+  D +T   +++A   + 
Sbjct: 219 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 278

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            LKQG+ +H   I  G+ ++  + +  ++MY K G +  +   F+GM   + VSW+ ++ 
Sbjct: 279 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLG 338

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N   EK +  FREM    E+ D     + + A A L  +  GK IH   ++ G   
Sbjct: 339 GYCQNGEHEKAIEMFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 394

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V V ++LI +Y + G I+ A R +  M+ +++++WNA++   A NG+ EEA    ++
Sbjct: 395 N--VIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFND 452

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRS-----VHGYAIRRLLGYDLLMMNSLMDF 322
           M + + ++PD  + + +++ C  + L+ EGR+        Y I+    +     + ++D 
Sbjct: 453 M-VKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEH----YSCMIDL 507

Query: 323 YSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             ++    +AE L +     ND   W  ++
Sbjct: 508 LGRAGLFEEAENLLDRAECRNDASLWGVLL 537



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 129/309 (41%), Gaps = 12/309 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++   +SLL  Y        +  +F     K++V+W+A++    +N      +  F
Sbjct: 294 GIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMF 353

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM E+    D      ++ A   +  ++ G+ +H   ++ G   +  + +  +++Y K 
Sbjct: 354 REMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 409

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   +S M   + ++WN ++S    N   E+ + +F +M   G + D +S  + +
Sbjct: 410 GCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVL 469

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A    G +  G+   AL  K  Y   P     + +I +  + G  E AE       C++
Sbjct: 470 TACGHTGLVEEGRNYFALMAK-SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRN 528

Query: 242 VVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             S W  ++   A N       + +   + M  +EP       L+S    ++    GR  
Sbjct: 529 DASLWGVLLGPCAANTDASSIAERI--AKRMMELEPKYHMSYVLLSNMYKAI----GRHG 582

Query: 301 HGYAIRRLL 309
               IR+L+
Sbjct: 583 DALKIRKLM 591



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 73/154 (47%), Gaps = 2/154 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   ++   ++L+  Y      + +  ++ +   ++++TWNAM++A  +N      + F
Sbjct: 390 RGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSF 449

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYA 119
           F +MV++GI+ D  + + +++A      +++GR    L  K+ G+   +   +  +++  
Sbjct: 450 FNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLG 509

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHN 152
           + G    +E       C +  S W  ++  C  N
Sbjct: 510 RAGLFEEAENLLDRAECRNDASLWGVLLGPCAAN 543


>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
 gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/528 (29%), Positives = 275/528 (52%), Gaps = 32/528 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAP 341
           +L+  C        G   H + ++  L  D  + NSL+  Y K    + +   +F+    
Sbjct: 66  SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG-RF 124

Query: 342 MNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKS 389
           + D +SW SM+SG            +F EM+      +  TL + + +C+    +  G+ 
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184

Query: 390 IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
            H   +  GF  N    + L ++Y    + V A  +   +    D  CW  V+ A ++N 
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE-PDVICWTAVLSAFSKND 243

Query: 450 HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
            ++EA+  F +M + +   PD  T   V++ACGNL    +GK +HG  + + +G +  V+
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303

Query: 510 NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE 569
           ++L+ MYG+C  ++ A  VF      N  +W+ ++  + QN    +A+E+FR +E E + 
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME-EKDL 362

Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMY--SNCKSNAA----- 622
               ++L AC  L  +R GK+IHG     G   N  + SAL+D+Y  S C  +A+     
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422

Query: 623 --------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
                   W++M+SA   +G+G EA+  F++M   GI+P   S I++L+AC H+G+VDEG
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482

Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
             Y+  M + Y ++P TEH+ C++D+LGR+G  +EA   ++    +    +WG +L  C+
Sbjct: 483 RNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA 542

Query: 735 HHGD-TKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            + D +++ +++A+ + +LEP+    Y+ LSNMY A+GR  DA+ I K
Sbjct: 543 ANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRK 590



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 252/516 (48%), Gaps = 31/516 (6%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           H   +K+G+  D ++ N  +++Y K G  +  +   F G    D +SW ++MSG +    
Sbjct: 84  HAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKE 143

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             K L  F EM   G  A+  +LSSAV A + LGE+  G+  H + I  G+E + ++S T
Sbjct: 144 HVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISST 203

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
             L  +Y    +   A R F  M   DV+ W A++  F+ N  +EEA  L + M   + +
Sbjct: 204 --LAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGL 261

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
            PD +T  T+++ C +   L++G+ +HG  I   +G ++++ +SL+D Y K  S+ +A  
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQ 321

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +FN ++  N  VSW++++ G            +F+EM     +        +L +C    
Sbjct: 322 VFNGMSKKNS-VSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLA 376

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           ++  GK IH   ++ G   N I  +AL+ +Y   G + +A  +  ++S  +  + WN ++
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT-WNAML 435

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL- 501
            A  QNG  +EA+  F  M  ++   PD ++ + +++ACG+  +  EG++   L  KS  
Sbjct: 436 SALAQNGRGEEAVSFFNDMV-KKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYG 494

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFE--SCYNCNLCTWNCMISAFSQNKAEVRALEL 559
           +   T   + +I + GR    + A  + E   C N +   W  ++   + N    R  E 
Sbjct: 495 IKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN-DASLWGVLLGPCAANADASRVAER 553

Query: 560 F--RHLEFEPN-EISIVSILSACTQLGVLRHGKQIH 592
              R +E EP   +S V + +    +G  RHG  ++
Sbjct: 554 IAKRMMELEPKYHMSYVLLSNMYKAIG--RHGDALN 587



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 202/427 (47%), Gaps = 22/427 (5%)

Query: 36  KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
           KD ++W +M++  V  +  V  L  F EMV  G+  +  TL   V A +++  ++ GR  
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN-Y 154
           H + I  G   +  + +    +Y    +   +   F  M   D + W  ++S    N+ Y
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
            E   L++      G   D  +  + + A   L  L  GK IH   I  G   +  V V 
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSN--VVVE 303

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
           +SL+ MY +CG +  A + F GM+ K+ VSW+A++ G+  NG+ E+A ++  EM+     
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----- 358

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E D+    T++  CA    +R G+ +HG  +RR    ++++ ++L+D Y KS  +  A  
Sbjct: 359 EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASR 418

Query: 335 LFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPE 382
           +++ ++ + ++++WN+M+S L            F +M+    +  + + +AIL +C    
Sbjct: 419 VYSKMS-IRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477

Query: 383 SLEFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            ++ G++      K  G    T   + ++ +    G    A +LL+R    +D S W ++
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537

Query: 442 IVACTQN 448
           +  C  N
Sbjct: 538 LGPCAAN 544



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 165/337 (48%), Gaps = 31/337 (9%)

Query: 29  LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE-EGIRFDSTTLLIIVSALTQMN 87
           +F E    DV+ W A+++A  +N      L  F  M   +G+  D +T   +++A   + 
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            LKQG+ +H   I  G+ ++  + +  ++MY KCG +  +   F+GM   ++VSW+ ++ 
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N   EK +  FREM    E+ D     + + A A L  +  GK IH   ++ G   
Sbjct: 340 GYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG 395

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           +  V V ++LI +Y + G I++A R +  M+ +++++WNA++   A NG+ EEA    ++
Sbjct: 396 N--VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS--------- 318
           M + + ++PD  + + +++ C  + ++ EGR+           Y +LM  S         
Sbjct: 454 M-VKKGIKPDYISFIAILTACGHTGMVDEGRN-----------YFVLMAKSYGIKPGTEH 501

Query: 319 ---LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              ++D   ++    +AE L       ND   W  ++
Sbjct: 502 YSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 128/309 (41%), Gaps = 12/309 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  +++   +SLL  Y        +  +F     K+ V+W+A++    +N      +  F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM E+    D      ++ A   +  ++ G+ +H   ++ G   +  + +  +++Y K 
Sbjct: 355 REMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 410

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++S+   +S M   + ++WN ++S    N   E+ + +F +M   G + D +S  + +
Sbjct: 411 GCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A    G +  G+    L  K  Y   P     + +I +  + G  E AE       C++
Sbjct: 471 TACGHTGMVDEGRNYFVLMAK-SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529

Query: 242 VVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
             S W  ++   A N       + +   + M  +EP       L+S    ++    GR  
Sbjct: 530 DASLWGVLLGPCAANADASRVAERI--AKRMMELEPKYHMSYVLLSNMYKAI----GRHG 583

Query: 301 HGYAIRRLL 309
               IR+L+
Sbjct: 584 DALNIRKLM 592



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 73/154 (47%), Gaps = 2/154 (1%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   ++   ++L+  Y      +S+  ++ +   ++++TWNAM++A  +N      + F
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYA 119
           F +MV++GI+ D  + + I++A      + +GR    L  K+ G+   +   +  +++  
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLG 510

Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHN 152
           + G    +E       C +  S W  ++  C  N
Sbjct: 511 RAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544


>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 178/602 (29%), Positives = 302/602 (50%), Gaps = 55/602 (9%)

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAF----DLL- 265
           ++  NSL+  Y QCG +  A R    M  +D  ++  +I      G   +A     D+L 
Sbjct: 62  LAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLA 121

Query: 266 ----HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMD 321
                E  +   V P+  T   ++  C  +   R  R VHGY +      D  ++ SL++
Sbjct: 122 WGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVN 181

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKEMLYLCSQFSFSTLLAILPSCNS 380
            Y+K   ++ A  L   + P  D+VSW +++SG +   ML    + +    L +L     
Sbjct: 182 MYAKVGDVASARRLLLGL-PCRDVVSWTAIVSGCVLNAML----EEALGVFLMMLEDGVL 236

Query: 381 PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
           P ++     I    L +G S     V+AL+              +L  + H  D S  N 
Sbjct: 237 PNNVTMLSVIQACAL-MGASELFGPVHALV--------------VLLELEH--DASVVNS 279

Query: 441 VIVACTQNGHFQEAIKTFKSM-TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           +I+   +NG  +EAI+ FK    +  +   +   L  V+  C        G+ LH   +K
Sbjct: 280 LIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIK 339

Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
                   V+N+L+ MY R   I +A  VFE     ++ +WN +IS  ++      A+++
Sbjct: 340 MGAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDI 399

Query: 560 FRHLE------FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDM 613
           F  L         P+ ++++S+L AC+  G+L  G+ +HG+V   GF  +  I +AL+ M
Sbjct: 400 FSVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISM 459

Query: 614 YS---------------NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR-PTKSS 657
           Y+               + K   +W+SMI+AYG HG G  A+ +FH++ ++G   P   +
Sbjct: 460 YAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAIT 519

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S++SACSHSGLV EG + + +M  ++ + P  +H+ C+VD+LGRSG+  EA +FI+++
Sbjct: 520 FVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDM 579

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P++P   +WG +L+AC  HG+  + ++ A+ L  LEPE+  + +SLSN Y ++GRW+DA 
Sbjct: 580 PVRPDSTIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASVGRWRDAA 639

Query: 778 EI 779
           +I
Sbjct: 640 KI 641



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 226/515 (43%), Gaps = 59/515 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           R   A L  + SLL AY        +L L  E   +D  T+  +I+A       +  L  
Sbjct: 56  RSRQAPLAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRA 115

Query: 61  FGEMV------EEGI----RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
           F +M+      EEG+    R +  T   +V A       +  R+VH   +  G   D  +
Sbjct: 116 FLDMLAWGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFV 175

Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE 170
               VNMYAK GD+ S+     G+ C D VSW  I+SGC+ N   E+ L  F  M   G 
Sbjct: 176 LGSLVNMYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGV 235

Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
             +NV++ S + A A +G       +HAL + L  E     SV NSLI MY++ G +E A
Sbjct: 236 LPNNVTMLSVIQACALMGASELFGPVHALVVLLELEHD--ASVVNSLIMMYAKNGFVEEA 293

Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
            R F G   K               G      D+L                  ++  C  
Sbjct: 294 IRLFKGFYLK--------------TGSVCSNEDVL----------------AAVLYGCTI 323

Query: 291 SLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
           S  ++ G  +H + I+      + + NSLM  Y++   +  A L+F  +  + D+VSWN+
Sbjct: 324 SGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGM-EVKDIVSWNT 382

Query: 351 MISGLFK-----EMLYLCSQF----------SFSTLLAILPSCNSPESLEFGKSIHCWQL 395
           +IS L K     E + + S             F T+L++L +C++   L  G+ +H + +
Sbjct: 383 IISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVM 442

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
           K GF  +    NAL+ MY   G +  A  + +R+    D   WN +I A   +G    A+
Sbjct: 443 KSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIK-DLVSWNSMINAYGMHGDGHSAL 501

Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
           + F  +      +P+++T V+VISAC +  L  EG
Sbjct: 502 RVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEG 536



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 11/282 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G    +    SL+  Y+     +++L +F     KD+V+WN +I+   +   V   +  F
Sbjct: 341 GAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIF 400

Query: 62  GEM---VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             +      G+  D  T+L ++ A +    L QG+++H   +K+G + D S+CN  ++MY
Sbjct: 401 SVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMY 460

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSL 177
           AK G ++ +E  F  M   D VSWN++++    +      L  F ++  +G  A N ++ 
Sbjct: 461 AKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITF 520

Query: 178 SSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
            S ++A +  G +S G K   ++G   G E  P +     ++ +  + G    AE+    
Sbjct: 521 VSVISACSHSGLVSEGHKCFESMGRDHGIE--PSMDHYACVVDLLGRSGRFAEAEQFIRD 578

Query: 237 MTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPD 277
           M  + D   W  ++    L+G  + A     E+    ++EP+
Sbjct: 579 MPVRPDSTIWGPLLAACQLHGNVDLAEKAAKELS---ALEPE 617


>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
 gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/430 (34%), Positives = 236/430 (54%), Gaps = 22/430 (5%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           L ++L  C        GK+ H   ++LG   +T+  N LM+MY  CG +  A  +   I 
Sbjct: 1   LHSLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP 60

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLELAFE 489
             S  S WNI+I  C QNG  ++AI  F  M  Q+  SP S  T+ +V+ AC      F 
Sbjct: 61  ERSMVS-WNIMIGTCVQNGEEEKAIDIFLEM--QREGSPCSEFTVSSVVCACAAKGDVFF 117

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
            + LH  A+K+++  D  V  ALI +Y +C  I+ AS VFE     N  TW+ +++ F Q
Sbjct: 118 CRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQ 177

Query: 550 NKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N+     L LF   + +  E N+  I S++ AC  L  L  G+Q+H  V   GF  N+F+
Sbjct: 178 NELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFV 237

Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
           +SAL+DMY+ C               K+   W+++IS +  H    E + LF EM  +G+
Sbjct: 238 ASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGM 297

Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
           +P + + +++LSAC H GLVD+G  Y++ M  E++V P   H+ C+VD+LGR G + EA+
Sbjct: 298 QPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAH 357

Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           E +  +P      +WG++L++C  HG+ ++ +  A+ LF++EP+  G Y+ L+N Y A  
Sbjct: 358 ELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASK 417

Query: 772 RWKDAVEIGK 781
           +W++A +  K
Sbjct: 418 KWEEAAKARK 427



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 168/346 (48%), Gaps = 4/346 (1%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           TS  L+  YS       +  +F E   + +V+WN MI  CV+N      +  F EM  EG
Sbjct: 35  TSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREG 94

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
                 T+  +V A      +   R +H  +IKA + AD  +    +++YAKCG +  + 
Sbjct: 95  SPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDAS 154

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
           C F GM   + V+W++I++G + N   E+ L+ F      G + +   +SS + A A L 
Sbjct: 155 CVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLA 214

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  G+ +HA+  + G+   P   V ++L+ MY++CG IE A   F  +  K+VV WNAI
Sbjct: 215 ALIEGRQVHAIVCRTGF--GPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAI 272

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I GFA +    E  +L  EMQ    ++PD  T V ++S C    L+ +GRS      R  
Sbjct: 273 ISGFAKHACSSEVMNLFEEMQ-QTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREH 331

Query: 309 -LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
            +  ++L  + ++D   +   + +A  L   +        W S+++
Sbjct: 332 NVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMWGSLLA 377



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 201/422 (47%), Gaps = 25/422 (5%)

Query: 92  GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           G+  H   I+ G+  D+   N+ +NMY+KCG +  +   F  +     VSWN ++  C+ 
Sbjct: 17  GKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQ 76

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           N   EK +  F EM   G      ++SS V A A  G++ + + +HA  IK   +   +V
Sbjct: 77  NGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADVFV 136

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
               +LI +Y++CG IE A   F GM  ++ V+W++I+ GF  N  +EE   L    + M
Sbjct: 137 G--TALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVLFARGKEM 194

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
             +E +   + ++I  CA    L EGR VH    R   G +  + ++L+D Y+K  S+ +
Sbjct: 195 -GLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAKCGSIEE 253

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A +LF  I   N +V WN++ISG            LF+EM     Q    T +A+L +C 
Sbjct: 254 AYVLFCNIEKKN-VVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAVLSACV 312

Query: 380 SPESLEFGKS-IHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               ++ G+S       +   S N +  + ++ +    G +  A  L+ ++   +  S W
Sbjct: 313 HVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAATASMW 372

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VTLVNVISACGNLELAFEG-KSL 493
             ++ +C  +G+ + A    K++ + +   PD     V L N  +A    E A +  KSL
Sbjct: 373 GSLLASCRIHGNLELAEIAAKNLFEME---PDRGGNYVLLANTYAASKKWEEAAKARKSL 429

Query: 494 HG 495
            G
Sbjct: 430 KG 431



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 209/451 (46%), Gaps = 40/451 (8%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPM 342
           +L+  CA +     G++ HG  IR  L  D L  N LM+ YSK   + +A  +F+ I P 
Sbjct: 3   SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEI-PE 61

Query: 343 NDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI 390
             +VSWN MI              +F EM    S  S  T+ +++ +C +   + F + +
Sbjct: 62  RSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQL 121

Query: 391 HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
           H + +K     +     AL+ +Y  CG +  A  + + +   +D + W+ ++    QN  
Sbjct: 122 HAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVT-WSSIVAGFVQNEL 180

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
           ++E +  F +  ++     +   + +VI AC  L    EG+ +H +  ++  G +  V +
Sbjct: 181 YEEGLVLF-ARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVAS 239

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEP 567
           AL+ MY +C  I+ A  +F +    N+  WN +IS F+++      + LF  ++    +P
Sbjct: 240 ALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQP 299

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMI 627
           +E++ V++LSAC  +G++  G+      F L  +E++   + L            +S M+
Sbjct: 300 DEVTYVAVLSACVHVGLVDKGRS----YFDLMTREHNVSPNVL-----------HYSCMV 344

Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
              G  G   EA EL  +M       T S   SLL++C   G ++       N+ E   +
Sbjct: 345 DILGRGGLVHEAHELMTKM---PFAATASMWGSLLASCRIHGNLELAEIAAKNLFE---M 398

Query: 688 RPET-EHHVCIVDMLGRSGKLQEAYEFIKNL 717
            P+   ++V + +    S K +EA +  K+L
Sbjct: 399 EPDRGGNYVLLANTYAASKKWEEAAKARKSL 429



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   +++L+  Y+     E +  LF     K+VV WNA+I+   ++ C    ++ F
Sbjct: 230 GFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLF 289

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAK 120
            EM + G++ D  T + ++SA   +  + +GR    L  +   ++ + L  +  V++  +
Sbjct: 290 EEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGR 349

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGC-LHNN 153
            G ++ +    + M  A T S W ++++ C +H N
Sbjct: 350 GGLVHEAHELMTKMPFAATASMWGSLLASCRIHGN 384


>gi|222637655|gb|EEE67787.1| hypothetical protein OsJ_25518 [Oryza sativa Japonica Group]
          Length = 588

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/545 (30%), Positives = 274/545 (50%), Gaps = 47/545 (8%)

Query: 273 SVEPDIATVVTLISLCA---DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           +V PD  T    +SL A   +  L+R+   +H  A R  L  D+ + N+L+  YS+  SL
Sbjct: 6   AVRPDAVTCTVALSLAAGRGEGFLVRQ---LHALAWRSGLAADVFVGNALVTAYSRGGSL 62

Query: 330 SKAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYLCS-QFSFSTLLAIL 375
            +A  +F+ + P  DLVSWN++I GL             F  ML     Q    ++ +++
Sbjct: 63  GEARSVFDDM-PARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVI 121

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
           P+C     LE G+ +H + +KLG        N L+ MY  CG   +A  L   +S   D 
Sbjct: 122 PACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSER-DV 180

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             W   I   + +G  ++A+  F  M ++    P+ VT V ++SA      A   + +H 
Sbjct: 181 VSWTTAI---SMDG--EDALTLFNGM-RRDGVPPNEVTFVALMSALPADCPARGAQMVHA 234

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
             LK+ +  +    N+LITMY + R +  A  VF+      +  WN +IS ++QN     
Sbjct: 235 ACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCND 294

Query: 556 ALELFRHLE--FEPNEISIVSILSACTQLGV--LRHGKQIHGHVFHLGFQENSFISSALL 611
           ALELF  +     PNE +  S+LSA T +    + +G+  H     +GF ++ +++ AL+
Sbjct: 295 ALELFSSMARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALI 354

Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
           DMY+                 +S  AW+++ISA   HG     + LF +M  SG+ P   
Sbjct: 355 DMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGV 414

Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
            ++++L+AC + G+VD G   +++M  +  V    EH+ C+VDMLGR+G+L EA E +  
Sbjct: 415 VLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMR 474

Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
           +P  P      ++L AC  HGD ++G+++A +L + EP   G Y+ LSN+Y  +G W   
Sbjct: 475 MPAGPSVSALQSLLGACRIHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGV 534

Query: 777 VEIGK 781
            ++ +
Sbjct: 535 AKVRR 539



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 223/500 (44%), Gaps = 28/500 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
           G  A +    +L+TAYS       + ++F +   +D+V+WNA+I    ++  C    +  
Sbjct: 41  GLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGV 100

Query: 61  FGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F  M+ +G ++ D  ++  ++ A      L+ GR VH  ++K G+    S+ NV V MY 
Sbjct: 101 FLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYY 160

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KCG   S+   F  M   D VSW T +S        E  L  F  M   G   + V+  +
Sbjct: 161 KCGAPGSARRLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRDGVPPNEVTFVA 215

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            ++A          +++HA  +K     S   + +NSLI+MY++   ++ A   F  M  
Sbjct: 216 LMSALPADCPARGAQMVHAACLKAAV--SGEAAASNSLITMYAKARRMDDARMVFDLMPR 273

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS--LCADSLLLREG 297
           +++++WNA+I G+A NG+  +A +L   M   R + P+  T  +++S     +++ +  G
Sbjct: 274 REIIAWNAVISGYAQNGRCNDALELFSSMA--RCLTPNETTFASVLSAVTAVETVSMAYG 331

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           +  H  A+    G    +  +L+D Y+K  +L ++   F+       L++W ++IS    
Sbjct: 332 QMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHET-EQRSLIAWTAIISANAR 390

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTI 404
                    LF +M           LLA+L +C     ++ G+ I        G      
Sbjct: 391 HGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPE 450

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             + ++ M    G L  A  L+ R+      S    ++ AC  +G  +   +  + +T++
Sbjct: 451 HYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIARILTEK 510

Query: 465 QNASPDS-VTLVNVISACGN 483
           +     + V L N+ +  G+
Sbjct: 511 EPTESGAYVLLSNIYADVGD 530


>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 251/478 (52%), Gaps = 35/478 (7%)

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LFN I P  D+V+W +MI G            +F EML    Q +  T+ ++L +C   +
Sbjct: 65  LFNEI-PERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMK 123

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-NCGDLVAAFSLLQRISHNSDTSCWNIV 441
           +L  G   H    K G   +    NAL+ MY  +C  +  A S+   I   +  S W  +
Sbjct: 124 ALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVS-WTTL 182

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I   T  G     +  F+ M  + +  P+S +      AC ++     GK +H    K  
Sbjct: 183 IAGFTHRGDGYSGLLAFRQMLLE-DVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG 241

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  V N+++ MY RC  +  A   F      NL TWN +I+ + ++ +   +L LF 
Sbjct: 242 LHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSS-ESLSLFF 300

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +    ++PN  +  SI +AC  L VL  G+Q+HG +   GF +N  + ++L+DMY+ C 
Sbjct: 301 QMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCG 360

Query: 619 SNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S +               +W++M+  YG HG G EA++LF EM  SGI+P +   + +L 
Sbjct: 361 SISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLC 420

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
            CSH+GLVD+GL+Y+ +MLE+Y++ P+ E + C+VD+LGR+G+++EA++ ++N+P +P  
Sbjct: 421 GCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDE 480

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VWGA+L AC  +  + +G   A+ +    P   G Y+ LS +Y A G+W +  ++ K
Sbjct: 481 SVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRK 538



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 209/451 (46%), Gaps = 21/451 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+ +Y +      +  LF E   +DVVTW AMI               F EM+   +
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA-KCGDLNSSE 128
           + ++ T+  ++ A   M  L  G + H L+ K G+     + N  ++MYA  C  ++ + 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+ +     VSW T+++G  H       LL FR+M       ++ S S A  A A + 
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 189 ELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             S GK IHA   K G   D+P   V NS++ MY +C  +  A+R F  +T K++++WN 
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAP---VMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNT 282

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  +    E+  L  +M      +P+  T  ++ + CA+  +L  G+ VHG  +RR
Sbjct: 283 LIAGYERSDS-SESLSLFFQMG-SEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRR 340

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               ++ ++NSL+D Y+K  S+S +  LF  + P  DLVSW +M+ G            L
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDM-PGRDLVSWTTMMIGYGAHGYGKEAVKL 399

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F EM+    Q      + +L  C+    ++ G K           + +      ++ +  
Sbjct: 400 FDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLG 459

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             G +  AF L++ +    D S W  ++ AC
Sbjct: 460 RAGRVEEAFQLVENMPFEPDESVWGALLGAC 490



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 37/281 (13%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P   S+L  Y   +Y   +   F E   K+++TWN +I A  E       L  F +M  E
Sbjct: 247 PVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI-AGYERSDSSESLSLFFQMGSE 305

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + +  T   I +A   +  L  G+ VH   ++ G   + +L N  ++MYAKCG ++ S
Sbjct: 306 GYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDS 365

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D VSW T+M G   + Y ++ +  F EM  SG Q D +     +   +  
Sbjct: 366 HKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHA 425

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G +  G                 +    S++  Y+   D E                +  
Sbjct: 426 GLVDKG-----------------LKYFRSMLEDYNINPDQEI---------------YRC 453

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           ++D     G+ EEAF L+  M      EPD +    L+  C
Sbjct: 454 VVDLLGRAGRVEEAFQLVENMPF----EPDESVWGALLGAC 490


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 300/619 (48%), Gaps = 41/619 (6%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H+L +KLG     Y    N++++ Y +C ++ +A+  F  M  +D VSWN +I G    G
Sbjct: 21  HSLAVKLGTIADVYT--CNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCG 78

Query: 257 KFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
             E ++D+L   + MRS   E D  T  +++   A + +   G+ VH   I+     ++ 
Sbjct: 79  NLEASWDVL---RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVY 135

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
             ++L+D Y+K   L  A L F +I+  N  VSWN+MI+G            L   M   
Sbjct: 136 AGSALLDMYAKCEKLEDAYLSFLSISKHNT-VSWNAMINGYAQAGDRETAFWLLDCMEQE 194

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +    T   +LP  +  +       +H   +K G        NAL+  Y  CG L  A
Sbjct: 195 GEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDA 254

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +    +   D   WN ++ A         A K    M Q+    PD  +  ++ISAC 
Sbjct: 255 KRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDM-QEHGFEPDLYSYTSIISACF 313

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR--DIKSASTVFESCYNCNLCTW 540
           N  ++  G+SLHGL +K        + NALI+MY +     +K A  +FES    +  +W
Sbjct: 314 NENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSW 373

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +++  SQ  +   A++ F H+     + +  S  ++L +C+ L   + G+QIH     
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALK 433

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G + N F+SS+L+ MYS C                S+  W++++  Y  HG+   A++L
Sbjct: 434 YGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDL 493

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F  M    ++    + +++L+ACSH GLV++G ++   M  +Y V P  EH+ C VD+ G
Sbjct: 494 FFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYG 553

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           RSG+L+EA   I+ +P +P   VW   L AC   G+ ++  QVA  L ++EPE    Y+ 
Sbjct: 554 RSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVL 613

Query: 763 LSNMYVALGRWKDAVEIGK 781
           LSNMY  L RW +  ++ +
Sbjct: 614 LSNMYGNLMRWDEKAKVKR 632



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 313/651 (48%), Gaps = 49/651 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L++K G IAD   CN  +N Y KC +L S++  F  M   D+VSWNT+++G ++    
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E      R M   G + D  +  S +   A  G    G+ +H++ IK+GY ++ Y    +
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG--S 138

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY++C  +E A  +F  ++  + VSWNA+I+G+A  G  E AF LL  M+     +
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME-QEGEK 197

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D  T   L+ L  D+        +HG  I+  L     M N+L+  YSK  SL  A+ +
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 336 FNAIAPMNDLVSWNSMISG--------LFKEMLYLCSQFSFSTLL----AILPSCNSPES 383
           F++ A + DLV+WNS+++         L  ++L    +  F   L    +I+ +C +   
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYI--NCGDLVAAFSLLQRISHNSDTSCWNIV 441
              G+S+H   +K GF  +    NAL+ MY+  + G +  A  + + +    D   WN +
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFK-DRVSWNSI 376

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +   +Q G  ++A+K+F  M +      D  +   V+ +C +L     G+ +H LALK  
Sbjct: 377 LTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  +  V ++LI MY +C  I+ A   FE     +  TWN ++  ++Q+     AL+LF 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +E    + + I+ V++L+AC+ +G++  G +       L   E+ +     ++ Y    
Sbjct: 496 LMEEKKVKMDHITFVAVLTACSHIGLVEQGCKF------LRCMESDYGVPPRMEHY---- 545

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
                +  +  YG  G+  EA  L  EM     +P  +   + L AC   G ++   Q  
Sbjct: 546 -----ACAVDLYGRSGRLEEAKALIEEM---PFKPDTTVWKTFLGACRSCGNIELACQVA 597

Query: 679 NNMLEEYDVRPETEH--HVCIVDMLG---RSGKLQEAYEFIKNLPIQPKPG 724
            ++LE   + PE EH  +V + +M G   R  +  +    +K   ++  PG
Sbjct: 598 GHLLE---MEPE-EHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPG 644



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 163/637 (25%), Positives = 287/637 (45%), Gaps = 66/637 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +A + T  ++L  Y       S+  LF E   +D V+WN MI   +    +       
Sbjct: 28  GTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVL 87

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G   D  T   ++  +        G+ VH + IK G   +    +  ++MYAKC
Sbjct: 88  RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKC 147

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +  +F  +   +TVSWN +++G       E        M   GE+ D+ + +  +
Sbjct: 148 EKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
                    +    +H   IK G E     ++ N+LI+ YS+CG ++ A+R F      +
Sbjct: 208 PLLDDADFCNLTSQLHGKIIKHGLE--LVNTMCNALITSYSKCGSLDDAKRIFDSSAGIR 265

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+WN+++  + L  + + AF LL +MQ     EPD+ +  ++IS C +  +   GRS+
Sbjct: 266 DLVTWNSLLAAYLLRSQEDLAFKLLIDMQ-EHGFEPDLYSYTSIISACFNENISNNGRSL 324

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSN--SLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           HG  I+R     + + N+L+  Y KS+  S+ +A  +F ++    D VSWNS+++GL   
Sbjct: 325 HGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL-EFKDRVSWNSILTGLSQT 383

Query: 356 ------FKEMLYLCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                  K  L++ S       +SFS   A+L SC+   + + G+ IH   LK G  +N 
Sbjct: 384 GSSEDAVKSFLHMRSAAMDIDHYSFS---AVLRSCSDLATFQLGQQIHVLALKYGLESNE 440

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              ++L+ MY  CG +  A    +  S NS  + WN ++    Q+G    A+  F  M +
Sbjct: 441 FVSSSLIFMYSKCGIIEDARRSFEEASKNSSIT-WNALMFGYAQHGQCNVALDLFFLM-E 498

Query: 464 QQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQN--ALITMYGRCR 520
           ++    D +T V V++AC ++ L  +G K L    ++S  G+  R+++    + +YGR  
Sbjct: 499 EKKVKMDHITFVAVLTACSHIGLVEQGCKFLR--CMESDYGVPPRMEHYACAVDLYGRSG 556

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACT 580
            ++ A  + E                                + F+P+     + L AC 
Sbjct: 557 RLEEAKALIE-------------------------------EMPFKPDTTVWKTFLGACR 585

Query: 581 QLGVLRHGKQIHGHVFHLGFQEN-SFISSALLDMYSN 616
             G +    Q+ GH+  +  +E+ +++   L +MY N
Sbjct: 586 SCGNIELACQVAGHLLEMEPEEHCTYV--LLSNMYGN 620



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 6/253 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RGF   +P S +L++ Y    Y   + +L +F     KD V+WN+++T   +       +
Sbjct: 331 RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAV 390

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F  M    +  D  +   ++ + + +   + G+ +H L++K G+ ++  + +  + MY
Sbjct: 391 KSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMY 450

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KCG +  +  +F       +++WN +M G   +      L  F  M     + D+++  
Sbjct: 451 SKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFV 510

Query: 179 SAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           + + A + +G +  G K +  +    G    P +      + +Y + G +E A+     M
Sbjct: 511 AVLTACSHIGLVEQGCKFLRCMESDYGV--PPRMEHYACAVDLYGRSGRLEEAKALIEEM 568

Query: 238 TCK-DVVSWNAII 249
             K D   W   +
Sbjct: 569 PFKPDTTVWKTFL 581


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 248/467 (53%), Gaps = 39/467 (8%)

Query: 347  SWNSMISGLFKEMLYLCSQFSFSTL--LAILP----------SCNSPESLEFGKSIHCWQ 394
            SWNS+I+ L +    + +  +FS+L  L ++P          SC++   L  G+  H   
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168

Query: 395  LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
               GF  +    +AL+ MY  CG L  A +L   I   +  S W  +I    QN     A
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS-WTSMITGYVQNEQADNA 1227

Query: 455  IKTFKSMTQQQ-------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            +  FK   +++       N   DSV +V+V+SAC  +      + +HG  +K        
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287

Query: 508  VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF----RHL 563
            V N L+  Y +C     +  VF+     +  +WN MI+ ++Q+     ALE+F    RH+
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347

Query: 564  EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
                N +++ ++L AC   G LR GK IH  V  +  + N  + ++++DMY  C      
Sbjct: 1348 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 1407

Query: 618  ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                     K+  +W++M++ YG HG+  EA+++F++M  +G++P   + +S+L+ACSH+
Sbjct: 1408 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 1467

Query: 669  GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
            GLV+EG  ++N M  +YD+ P  EH+ C+VD+ GR+G L EAY  IK + ++P   VWG+
Sbjct: 1468 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 1527

Query: 729  MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +L AC  H +  +G+  A+ LF+L+P+N GYY+ LSN+Y   GRW D
Sbjct: 1528 LLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 192/395 (48%), Gaps = 54/395 (13%)

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           L +L +C + + L   + IH   ++ G SN+ +    L+H+Y   G +  A  L  +I  
Sbjct: 31  LFLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-Q 86

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           N  T  WN++I A T NG  ++A+  +K+M  Q  A+ D  T   VI AC N      GK
Sbjct: 87  NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA-DKFTFPFVIKACTNFLSIDLGK 145

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCR------------------------------- 520
            +HG  +K     D  VQN LI  Y +C                                
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILS 577
           D++ A  +F+   + N+ +W  MI+ + +N+    ALELF+ ++ E   PNE ++VS++ 
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           ACT++G+L  G+ IH +      +   ++ +AL+DMYS C               KS   
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMI++ G HG G EA+ LF EM    ++P   + I +L AC H   V EG  Y+  M 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           + Y + P  EH+ C+ ++  RS  L EA++  K +
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   L  S++L+  YS     + + ALF E   ++VV+W +MIT  V+N      L  F
Sbjct: 1172 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 1231

Query: 62   GEMVEE--------GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
             + +EE         +  DS  ++ ++SA ++++       VH   +K G      + N 
Sbjct: 1232 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 1291

Query: 114  FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQA 172
             ++ YAKCG    S+  F  M   D +SWN++++    +    + L  F  M    G + 
Sbjct: 1292 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 1351

Query: 173  DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            + V+LS+ + A A  G L  GK IH   IK+  E +  V V  S+I MY +CG +E A++
Sbjct: 1352 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN--VCVGTSIIDMYCKCGRVEMAKK 1409

Query: 233  AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
             F  M  K+V SW A++ G+ ++G+ +EA D+ ++M +   V+P+  T V++++ C+ + 
Sbjct: 1410 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKM-VRAGVKPNYITFVSVLAACSHAG 1468

Query: 293  LLREG-----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            L+ EG        H Y I   + +       ++D + ++  L++A  L   +    D V 
Sbjct: 1469 LVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 1524

Query: 348  WNSMI 352
            W S++
Sbjct: 1525 WGSLL 1529



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 219/470 (46%), Gaps = 40/470 (8%)

Query: 3    FLAHLPTSTSLLTAYSNVSYFESSLAL-FYETCNK-DVVTWNAMITACVENRCVVMGLHF 60
            FL   P+S     + S      S+LA  FY+  +K +V +WN++I         V  L  
Sbjct: 1076 FLLGFPSSRRRPVSLS------SNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRA 1129

Query: 61   FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            F  + + G+    ++    + + + +  L  GR+ H  +   G   D  + +  ++MY+K
Sbjct: 1130 FSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSK 1189

Query: 121  CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFR---EMGWSGEQADNVSL 177
            CG L  +   F  +   + VSW ++++G + N   +  LL F+   E     E  +NV L
Sbjct: 1190 CGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL 1249

Query: 178  SSAVAAS---ACLGELSYG--KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
             S V  S   AC      G  + +H   +K G++ S  + V N+L+  Y++CG    +++
Sbjct: 1250 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS--IGVGNTLMDAYAKCGQPLVSKK 1307

Query: 233  AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
             F  M  KD +SWN++I  +A +G   EA ++ H M     V  +  T+  ++  CA + 
Sbjct: 1308 VFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAG 1367

Query: 293  LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             LR G+ +H   I+  L Y++ +  S++D Y K   +  A+  F+ +   N + SW +M+
Sbjct: 1368 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN-VKSWTAMV 1426

Query: 353  SG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLE-----FGKSIHCWQL 395
            +G            +F +M+    + ++ T +++L +C+    +E     F    H + +
Sbjct: 1427 AGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDI 1486

Query: 396  KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
            + G  +       ++ ++   G L  A++L++R+    D   W  ++ AC
Sbjct: 1487 EPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 1532



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 189/466 (40%), Gaps = 96/466 (20%)

Query: 87  NC--LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           NC   K  R +H   I++G+  D  L    +++Y+  G +  +   F  +    T +WN 
Sbjct: 36  NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNL 95

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           I+     N   E+ L+ ++ M   G  AD  +    + A      +  GKV+H   IK G
Sbjct: 96  IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 205 YEDSPYVSVTNSLISMYSQ-------------------------------CGDIEAAERA 233
           +     V V N+LI  Y +                               CGD++ A R 
Sbjct: 156 FSGD--VFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  K+VVSW A+I+G+  N + EEA +L   MQ   ++ P+  T+V+LI  C +  +
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ-AENIFPNEYTMVSLIKACTEMGI 272

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  GR +H YAI+  +   + +  +L+D YSK  S+  A  +F  + P   L +WNSMI+
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM-PRKSLPTWNSMIT 331

Query: 354 GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            L                                                 GV+ L    
Sbjct: 332 SL-------------------------------------------------GVHGLGQEA 342

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-- 471
           +N       FS ++R++   D   +  V+ AC    + +E    F  MTQ    +P    
Sbjct: 343 LNL------FSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396

Query: 472 -VTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITM 515
              +  + +   NL+ AF+  K +  LA    +  D R + A++++
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQAVLSI 442



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 53/364 (14%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +  L+  YS       ++ LFY+  N    TWN +I A   N      L  +  MV +GI
Sbjct: 62  TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG------- 122
             D  T   ++ A T    +  G+VVH   IK G   D  + N  ++ Y KCG       
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181

Query: 123 ------------------------DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
                                   DL  +   F  +   + VSW  +++G + N  PE+ 
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241

Query: 159 LLYFREMGWSGEQADNV-----SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           L  F+ M     QA+N+     ++ S + A   +G L+ G+ IH   IK   E   Y+  
Sbjct: 242 LELFKRM-----QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLG- 295

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +LI MYS+CG I+ A   F  M  K + +WN++I    ++G  +EA +L  EM+ + +
Sbjct: 296 -TALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERV-N 353

Query: 274 VEPDIATVVTLISLCADSLLLREG-----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           V+PD  T + ++  C     ++EG     R    Y I  +  +       + + Y++SN+
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH----YECMTELYARSNN 409

Query: 329 LSKA 332
           L +A
Sbjct: 410 LDEA 413



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 41/352 (11%)

Query: 432  NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
             S+   WN VI    + G   EA++ F S+ ++    P   +    I +C  L     G+
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSL-RKLGLIPTRSSFPCTIKSCSALCDLVSGR 1162

Query: 492  SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
              H  A       D  V +ALI MY +C  +K A  +F+     N+ +W  MI+ + QN+
Sbjct: 1163 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 1222

Query: 552  AEVRALELFRHLEFEPNEIS-----------IVSILSACTQLGVLRHGKQIHGHVFHLGF 600
                AL LF+    E  E+            +VS+LSAC+++      + +HG V   GF
Sbjct: 1223 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 1282

Query: 601  QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
              +  + + L+D Y+ C               K + +W+SMI+ Y   G   EA+E+FH 
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 1342

Query: 646  MCNS-GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC----IVDM 700
            M    G+R    ++ ++L AC+H+G +  G   ++ +     ++ + E++VC    I+DM
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV-----IKMDLEYNVCVGTSIIDM 1397

Query: 701  LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
              + G+++ A +    +  +     W AM++    HG     K+  ++ +K+
Sbjct: 1398 YCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHG---RAKEALDIFYKM 1445



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            +GF   +    +L+ AY+       S  +F     KD ++WN+MI    ++      L  
Sbjct: 1280 KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEV 1339

Query: 61   FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  MV   G+R+++ TL  ++ A      L+ G+ +H   IK  +  +  +    ++MY 
Sbjct: 1340 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 1399

Query: 120  KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            KCG +  ++ TF  M   +  SW  +++G   +   ++ L  F +M  +G + + ++  S
Sbjct: 1400 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 1459

Query: 180  AVAASACLGELSYGKVIHAL-GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +AA +  G +  G   H    +K  Y+  P +     ++ ++ + G +  A      M 
Sbjct: 1460 VLAACSHAGLVEEG--WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517

Query: 239  CK-DVVSWNAII 249
             K D V W +++
Sbjct: 1518 MKPDFVVWGSLL 1529


>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 594

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 251/478 (52%), Gaps = 35/478 (7%)

Query: 335 LFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           LFN I P  D+V+W +MI G            +F EML    Q +  T+ ++L +C   +
Sbjct: 65  LFNEI-PERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMK 123

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-NCGDLVAAFSLLQRISHNSDTSCWNIV 441
           +L  G   H    K G   +    NAL+ MY  +C  +  A S+   I   +  S W  +
Sbjct: 124 ALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVS-WTTL 182

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I   T  G     +  F+ M  + +  P+S +      AC ++     GK +H    K  
Sbjct: 183 IAGFTHRGDGYSGLLAFRQMLLE-DVGPNSFSFSIAARACASISSYSCGKQIHAAVTKYG 241

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  D  V N+++ MY RC  +  A   F      NL TWN +I+ + ++ +   +L LF 
Sbjct: 242 LHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSS-ESLSLFF 300

Query: 562 HLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +    ++PN  +  SI +AC  L VL  G+Q+HG +   GF +N  + ++L+DMY+ C 
Sbjct: 301 QMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCG 360

Query: 619 SNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
           S +               +W++M+  YG HG G EA++LF EM  SGI+P +   + +L 
Sbjct: 361 SISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLC 420

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
            CSH+GLVD+GL+Y+ +MLE+Y++ P+ E + C+VD+LGR+G+++EA++ ++N+P +P  
Sbjct: 421 GCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDE 480

Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            VWGA+L AC  +  + +G   A+ +    P   G Y+ LS +Y A G+W +  ++ K
Sbjct: 481 SVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRK 538



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 209/451 (46%), Gaps = 21/451 (4%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+ +Y +      +  LF E   +DVVTW AMI               F EM+   +
Sbjct: 46  ATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA-KCGDLNSSE 128
           + ++ T+  ++ A   M  L  G + H L+ K G+     + N  ++MYA  C  ++ + 
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
             F+ +     VSW T+++G  H       LL FR+M       ++ S S A  A A + 
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225

Query: 189 ELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
             S GK IHA   K G   D+P   V NS++ MY +C  +  A+R F  +T K++++WN 
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAP---VMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNT 282

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           +I G+  +    E+  L  +M      +P+  T  ++ + CA+  +L  G+ VHG  +RR
Sbjct: 283 LIAGYERSDS-SESLSLFFQMG-SEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRR 340

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
               ++ ++NSL+D Y+K  S+S +  LF  + P  DLVSW +M+ G            L
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDM-PGRDLVSWTTMMIGYGAHGYGKEAVKL 399

Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYI 414
           F EM+    Q      + +L  C+    ++ G K           + +      ++ +  
Sbjct: 400 FDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLG 459

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             G +  AF L++ +    D S W  ++ AC
Sbjct: 460 RAGRVEEAFQLVENMPFEPDESVWGALLGAC 490



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 37/281 (13%)

Query: 8   PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
           P   S+L  Y   +Y   +   F E   K+++TWN +I A  E       L  F +M  E
Sbjct: 247 PVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI-AGYERSDSSESLSLFFQMGSE 305

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G + +  T   I +A   +  L  G+ VH   ++ G   + +L N  ++MYAKCG ++ S
Sbjct: 306 GYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDS 365

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F  M   D VSW T+M G   + Y ++ +  F EM  SG Q D +     +   +  
Sbjct: 366 HKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHA 425

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G +  G                 +    S++  Y+   D E                +  
Sbjct: 426 GLVDKG-----------------LKYFRSMLEDYNINPDQEI---------------YRC 453

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
           ++D     G+ EEAF L+  M      EPD +    L+  C
Sbjct: 454 VVDLLGRAGRVEEAFQLVENMPF----EPDESVWGALLGAC 490


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/544 (32%), Positives = 284/544 (52%), Gaps = 46/544 (8%)

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
           P +  + +L SL   S   +    +H   I   L     + N+L++ Y+K  S+ +  LL
Sbjct: 25  PFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLL 84

Query: 336 FNAIAPMN--DLVSWNSMISGL------FKEMLYL---------CSQFSFSTLLAILPSC 378
           F++ AP +  ++VSW S+I+ L      FK + +           + ++FS   A+L +C
Sbjct: 85  FSS-APDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFS---AVLSAC 140

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
               +   G+ +H    K GF      V+AL+ MY  C D++ A  + + +   +  S W
Sbjct: 141 TDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVS-W 199

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC---GNLELAFEGKSLHG 495
           N +IV   QN  + +AI  FK++  +   + D V+  +V SAC   GNLE    GK +HG
Sbjct: 200 NTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEF---GKQVHG 256

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           +ALK  +     + N+L  MYG+C      + +F +    ++ TWN MI A+  N     
Sbjct: 257 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 316

Query: 556 ALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           A   F  +  +   P+E S  S+L +C  L  L  G  IH  +   GF +N  ++S+L+ 
Sbjct: 317 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 376

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MY+ C               ++   W+++I+A   HG     +ELF +M   GI+P   +
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 436

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+LSACSH+G V+EG  Y+N+M++ + + P  EH+ CIVD+L R+G+L  A  FI+ +
Sbjct: 437 FVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELM 496

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           PI+P   VWGA+LSAC +H +  MGK+VA  LF LEP+N G Y+ L N+    G   +A 
Sbjct: 497 PIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEAD 556

Query: 778 EIGK 781
           E+ +
Sbjct: 557 EVRR 560



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 236/511 (46%), Gaps = 53/511 (10%)

Query: 12  SLLTAYSNVSYFESSLALFYETCN--KDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +LL  Y+     + +L LF    +  K+VV+W ++IT     +     L FF  M   G+
Sbjct: 67  NLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGV 126

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             +  T   ++SA T       G  +H L  K G +A+  + +  V+MYAKC D+  +E 
Sbjct: 127 YPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEK 186

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQA-DNVSLSSAVAASACLG 188
            F  M   + VSWNT++ G L N   ++ + +F+ +      A D VS SS  +A A  G
Sbjct: 187 VFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAG 246

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L +GK +H + +KLG  +  Y++  NSL  MY +CG      + F     +DVV+WN +
Sbjct: 247 NLEFGKQVHGVALKLGVWNLVYIN--NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIM 304

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I  +  N  +E+A +    M+   S+ PD A+  +++  CA+   L +G  +H   IR  
Sbjct: 305 IMAYVYNHNYEDACNSFWMMRRKGSI-PDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 363

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
              +L + +SL+  Y+K  SL  A  +F      N +V W ++I+             LF
Sbjct: 364 FVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRN-VVCWTAIIAACQQHGHANWVVELF 422

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALM--HMYI 414
           ++ML    +  + T +++L +C+    +E G           + N+ I V+ +   H + 
Sbjct: 423 EQMLREGIKPDYITFVSVLSACSHTGRVEEG---------FFYFNSMIKVHGIYPGHEHY 473

Query: 415 NC--------GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF----QEAIKTFKSMT 462
            C        G+L  A   ++ +    D S W  ++ AC  + +     + A+K F    
Sbjct: 474 ACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF---- 529

Query: 463 QQQNASPDS----VTLVNVISACGNLELAFE 489
              +  PD+    V L N+++  G L  A E
Sbjct: 530 ---DLEPDNPGNYVLLCNILTRNGMLNEADE 557



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 206/430 (47%), Gaps = 26/430 (6%)

Query: 82  ALTQMNCL-------KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
            LT +N L       K    +H   I   +++   L N  +N+YAKCG ++ +   FS  
Sbjct: 29  PLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSA 88

Query: 135 --HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
                + VSW ++++       P K L +F  M  SG   ++ + S+ ++A        +
Sbjct: 89  PDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVH 148

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           G+ +H+L  K G+     V V ++L+ MY++C D+  AE+ F  M  +++VSWN +I GF
Sbjct: 149 GEQMHSLVWKHGFLAE--VFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGF 206

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             N  +++A      + L      D  +  ++ S CA++  L  G+ VHG A++  +   
Sbjct: 207 LQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNL 266

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY--LCSQF---- 366
           + + NSL D Y K    +    LF+      D+V+WN MI        Y   C+ F    
Sbjct: 267 VYINNSLSDMYGKCGLFNDVAKLFSNTG-ARDVVTWNIMIMAYVYNHNYEDACNSFWMMR 325

Query: 367 ------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                   ++  ++L SC +  +L  G  IH   ++ GF  N    ++L+ MY  CG LV
Sbjct: 326 RKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLV 385

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            AF + +  + + +  CW  +I AC Q+GH    ++ F+ M  ++   PD +T V+V+SA
Sbjct: 386 DAFQIFEE-TEDRNVVCWTAIIAACQQHGHANWVVELFEQML-REGIKPDYITFVSVLSA 443

Query: 481 CGNLELAFEG 490
           C +     EG
Sbjct: 444 CSHTGRVEEG 453



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 19/362 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GFLA +   ++L+  Y+       +  +F E   +++V+WN MI   ++N+     + FF
Sbjct: 160 GFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFF 219

Query: 62  GEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             ++ E +   D  +   + SA      L+ G+ VH +++K G+     + N   +MY K
Sbjct: 220 KTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGK 279

Query: 121 CGDLNSSECTFSGMHCADTVSWNT-IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           CG  N     FS     D V+WN  IM+   ++NY + C  ++  M   G   D  S SS
Sbjct: 280 CGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWM-MRRKGSIPDEASYSS 338

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            + + A L  L  G +IH   I+ G+  +  + V +SLI+MY++CG +  A + F     
Sbjct: 339 VLHSCANLAALYQGTLIHNQIIRSGFVKN--LRVASSLITMYAKCGSLVDAFQIFEETED 396

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR- 298
           ++VV W AII     +G      +L  +M L   ++PD  T V+++S C+ +  + EG  
Sbjct: 397 RNVVCWTAIIAACQQHGHANWVVELFEQM-LREGIKPDYITFVSVLSACSHTGRVEEGFF 455

Query: 299 ------SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                  VHG       G++      ++D  S++  L +A+     +    D   W +++
Sbjct: 456 YFNSMIKVHGI----YPGHE--HYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 509

Query: 353 SG 354
           S 
Sbjct: 510 SA 511



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 3/155 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF+ +L  ++SL+T Y+       +  +F ET +++VV W A+I AC ++      +  F
Sbjct: 363 GFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELF 422

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAK 120
            +M+ EGI+ D  T + ++SA +    +++G       IK  G+          V++ ++
Sbjct: 423 EQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSR 482

Query: 121 CGDLNSSECTFSGMHC-ADTVSWNTIMSGCL-HNN 153
            G+L+ ++     M    D   W  ++S C  H+N
Sbjct: 483 AGELDRAKRFIELMPIKPDASVWGALLSACRNHSN 517


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 300/619 (48%), Gaps = 41/619 (6%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H+L +KLG     Y    N++++ Y +C ++ +A+  F  M  +D VSWN +I G    G
Sbjct: 21  HSLAVKLGTIADVYT--CNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCG 78

Query: 257 KFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
             E ++D+L   + MRS   E D  T  +++   A + +   G+ VH   I+     ++ 
Sbjct: 79  NLEASWDVL---RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVY 135

Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYL 362
             ++L+D Y+K   L  A L F +I+  N  VSWN+MI+G            L   M   
Sbjct: 136 AGSALLDMYAKCEKLEDAYLSFLSISKHNT-VSWNAMINGYAQAGDRETAFWLLDCMEQE 194

Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
             +    T   +LP  +  +       +H   +K G        NAL+  Y  CG L  A
Sbjct: 195 GEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDA 254

Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
             +    +   D   WN ++ A         A K    M Q+    PD  +  ++ISAC 
Sbjct: 255 KRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDM-QEHGFEPDLYSYTSIISACF 313

Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR--DIKSASTVFESCYNCNLCTW 540
           N  ++  G+SLHGL +K        + NALI+MY +     +K A  +FES    +  +W
Sbjct: 314 NENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSW 373

Query: 541 NCMISAFSQNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFH 597
           N +++  SQ  +   A++ F H+     +I   S  ++L +C+ L   + G+QIH     
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALK 433

Query: 598 LGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIEL 642
            G + N F+SS+L+ MYS C                S+  W++++  Y  HG+   A++L
Sbjct: 434 YGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDL 493

Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
           F  M    ++    + +++L+ACSH GLV++G ++   M  +Y V P  EH+ C VD+ G
Sbjct: 494 FFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYG 553

Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
           RSG+L+EA   I+ +P +P   VW   L AC   G+ ++  QVA  L ++EPE    Y+ 
Sbjct: 554 RSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVL 613

Query: 763 LSNMYVALGRWKDAVEIGK 781
           LSNMY  L RW +  ++ +
Sbjct: 614 LSNMYGNLMRWDEKAKVKR 632



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 313/651 (48%), Gaps = 49/651 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           H L++K G IAD   CN  +N Y KC +L S++  F  M   D+VSWNT+++G ++    
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           E      R M   G + D  +  S +   A  G    G+ +H++ IK+GY ++ Y    +
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG--S 138

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY++C  +E A  +F  ++  + VSWNA+I+G+A  G  E AF LL  M+     +
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCME-QEGEK 197

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D  T   L+ L  D+        +HG  I+  L     M N+L+  YSK  SL  A+ +
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 336 FNAIAPMNDLVSWNSMISG--------LFKEMLYLCSQFSFSTLL----AILPSCNSPES 383
           F++ A + DLV+WNS+++         L  ++L    +  F   L    +I+ +C +   
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYI--NCGDLVAAFSLLQRISHNSDTSCWNIV 441
              G+S+H   +K GF  +    NAL+ MY+  + G +  A  + + +    D   WN +
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFK-DRVSWNSI 376

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +   +Q G  ++A+K+F  M +      D  +   V+ +C +L     G+ +H LALK  
Sbjct: 377 LTGLSQTGSSEDAVKSFLHM-RSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYG 435

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
           +  +  V ++LI MY +C  I+ A   FE     +  TWN ++  ++Q+     AL+LF 
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 562 HLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
            +E +    + I+ V++L+AC+ +G++  G +       L   E+ +     ++ Y    
Sbjct: 496 LMEXKKVKMDHITFVAVLTACSHIGLVEQGCKF------LRCMESDYGVPPRMEHY---- 545

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
                +  +  YG  G+  EA  L  EM     +P  +   + L AC   G ++   Q  
Sbjct: 546 -----ACAVDLYGRSGRLEEAKALIEEM---PFKPDTTVWKTFLGACRSCGNIELACQVA 597

Query: 679 NNMLEEYDVRPETEH--HVCIVDMLG---RSGKLQEAYEFIKNLPIQPKPG 724
            ++LE   + PE EH  +V + +M G   R  +  +    +K   ++  PG
Sbjct: 598 GHLLE---MEPE-EHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPG 644



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 163/637 (25%), Positives = 286/637 (44%), Gaps = 66/637 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +A + T  ++L  Y       S+  LF E   +D V+WN MI   +    +       
Sbjct: 28  GTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVL 87

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M   G   D  T   ++  +        G+ VH + IK G   +    +  ++MYAKC
Sbjct: 88  RCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKC 147

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             L  +  +F  +   +TVSWN +++G       E        M   GE+ D+ + +  +
Sbjct: 148 EKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLL 207

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF-WGMTCK 240
                    +    +H   IK G E     ++ N+LI+ YS+CG ++ A+R F      +
Sbjct: 208 PLLDDADFCNLTSQLHGKIIKHGLE--LVNTMCNALITSYSKCGSLDDAKRIFDSSAGIR 265

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           D+V+WN+++  + L  + + AF LL +MQ     EPD+ +  ++IS C +  +   GRS+
Sbjct: 266 DLVTWNSLLAAYLLRSQEDLAFKLLIDMQ-EHGFEPDLYSYTSIISACFNENISNNGRSL 324

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSN--SLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
           HG  I+R     + + N+L+  Y KS+  S+ +A  +F ++    D VSWNS+++GL   
Sbjct: 325 HGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESL-EFKDRVSWNSILTGLSQT 383

Query: 356 ------FKEMLYLCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                  K  L++ S       +SFS   A+L SC+   + + G+ IH   LK G  +N 
Sbjct: 384 GSSEDAVKSFLHMRSAAMDIDHYSFS---AVLRSCSDLATFQLGQQIHVLALKYGLESNE 440

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
              ++L+ MY  CG +  A    +  S NS  + WN ++    Q+G    A+  F  M +
Sbjct: 441 FVSSSLIFMYSKCGIIEDARRSFEEASKNSSIT-WNALMFGYAQHGQCNVALDLFFLM-E 498

Query: 464 QQNASPDSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQN--ALITMYGRCR 520
            +    D +T V V++AC ++ L  +G K L    ++S  G+  R+++    + +YGR  
Sbjct: 499 XKKVKMDHITFVAVLTACSHIGLVEQGCKFLR--CMESDYGVPPRMEHYACAVDLYGRSG 556

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACT 580
            ++ A  + E                                + F+P+     + L AC 
Sbjct: 557 RLEEAKALIE-------------------------------EMPFKPDTTVWKTFLGACR 585

Query: 581 QLGVLRHGKQIHGHVFHLGFQEN-SFISSALLDMYSN 616
             G +    Q+ GH+  +  +E+ +++   L +MY N
Sbjct: 586 SCGNIELACQVAGHLLEMEPEEHCTYV--LLSNMYGN 620



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 6/253 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSY--FESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RGF   +P S +L++ Y    Y   + +L +F     KD V+WN+++T   +       +
Sbjct: 331 RGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAV 390

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             F  M    +  D  +   ++ + + +   + G+ +H L++K G+ ++  + +  + MY
Sbjct: 391 KSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMY 450

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KCG +  +  +F       +++WN +M G   +      L  F  M     + D+++  
Sbjct: 451 SKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFV 510

Query: 179 SAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           + + A + +G +  G K +  +    G    P +      + +Y + G +E A+     M
Sbjct: 511 AVLTACSHIGLVEQGCKFLRCMESDYGV--PPRMEHYACAVDLYGRSGRLEEAKALIEEM 568

Query: 238 TCK-DVVSWNAII 249
             K D   W   +
Sbjct: 569 PFKPDTTVWKTFL 581


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/481 (31%), Positives = 257/481 (53%), Gaps = 34/481 (7%)

Query: 332 AELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYLCSQFSFSTLLAILPSC 378
           + LLF+ IAP  +  ++N MI  L             F  M+ L       T      SC
Sbjct: 73  SSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSC 132

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +  SL    + H    KL   ++    ++L+  Y  CG + +A  +   I H  D+  W
Sbjct: 133 ANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHR-DSVSW 191

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
           N +I    + G  +EA++ F+ M ++    PD ++LV+++ ACG L     G+ + G  +
Sbjct: 192 NSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVV 251

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
           +  M L++ + +ALI+MY +C +++SA  +F+     ++ TWN +IS ++QN     A+ 
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAIL 311

Query: 559 LFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
           LF  ++ +    N+I++ ++LSAC  +G L  GKQI  +    GFQ + F+++AL+DMY+
Sbjct: 312 LFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYA 371

Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG--IRPTKSSV 658
                            K+ A+W++MISA   HGK  EA+ LF  M + G   RP   + 
Sbjct: 372 KSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITF 431

Query: 659 ISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLP 718
           + LLSAC H+GLVDEG + ++ M   + + P+ EH+ C+VD+L R+G L EA++ I+ +P
Sbjct: 432 VGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMP 491

Query: 719 IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
            +P     GA+L AC    +  +G++V  ++ +++P N G YI  S +Y  L  W+D+  
Sbjct: 492 EKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSAR 551

Query: 779 I 779
           +
Sbjct: 552 M 552



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 213/441 (48%), Gaps = 48/441 (10%)

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           +NYP    L+ R M  S    DN +      + A L  LS+    H+L  KL     P+ 
Sbjct: 101 HNYPLALSLFHRMMSLS-LTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHT 159

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
           +  +SLI+ Y++CG + +A + F  +  +D VSWN++I G+A  G   EA ++  EM   
Sbjct: 160 A--HSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRR 217

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
              EPD  ++V+L+  C +   L  GR V G+ + R +  +  + ++L+  Y+K   L  
Sbjct: 218 DGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELES 277

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F+ +A   D+++WN++ISG            LF  M   C   +  TL A+L +C 
Sbjct: 278 ARRIFDGMAA-RDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACA 336

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +  +L+ GK I  +  + GF ++     AL+ MY   G L  A  + + +   ++ S WN
Sbjct: 337 TIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEAS-WN 395

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQ-QNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
            +I A   +G  +EA+  F+ M+ +   A P+ +T V ++SAC +  L  EG  L  + +
Sbjct: 396 AMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDM-M 454

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
            +L GL  ++++                             ++CM+   ++      A +
Sbjct: 455 STLFGLVPKIEH-----------------------------YSCMVDLLARAGHLYEAWD 485

Query: 559 LFRHLEFEPNEISIVSILSAC 579
           L R +  +P+++++ ++L AC
Sbjct: 486 LIRKMPEKPDKVTLGALLGAC 506



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 223/492 (45%), Gaps = 55/492 (11%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEM 64
           H P +  L  A    ++  SSL   +   + +   +N MI A         + L  F  M
Sbjct: 54  HTPNNHLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRM 113

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
           +   +  D+ T      +   +  L      H L  K  + +D    +  +  YA+CG +
Sbjct: 114 MSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLV 173

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAA 183
            S+   F  +   D+VSWN++++G        + +  FREMG   G + D +SL S + A
Sbjct: 174 ASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGA 233

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              LG+L  G+ +    ++ G   + Y+   ++LISMY++CG++E+A R F GM  +DV+
Sbjct: 234 CGELGDLELGRWVEGFVVERGMTLNSYIG--SALISMYAKCGELESARRIFDGMAARDVI 291

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WNA+I G+A NG  +EA  L H M+    V  +  T+  ++S CA    L  G+ +  Y
Sbjct: 292 TWNAVISGYAQNGMADEAILLFHGMK-EDCVTANKITLTAVLSACATIGALDLGKQIDEY 350

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKE 358
           A +R   +D+ +  +L+D Y+KS SL  A+ +F  + P  +  SWN+MIS L      KE
Sbjct: 351 ASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDM-PQKNEASWNAMISALAAHGKAKE 409

Query: 359 MLYLCSQFSFS---------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
            L L    S           T + +L +C           +H   +  G+         L
Sbjct: 410 ALSLFQHMSDEGGGARPNDITFVGLLSAC-----------VHAGLVDEGYR--------L 450

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
             M      +   F L+ +I H      ++ ++    + GH  EA    + M ++    P
Sbjct: 451 FDM------MSTLFGLVPKIEH------YSCMVDLLARAGHLYEAWDLIRKMPEK----P 494

Query: 470 DSVTLVNVISAC 481
           D VTL  ++ AC
Sbjct: 495 DKVTLGALLGAC 506



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 123/288 (42%), Gaps = 34/288 (11%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +    ++L++ Y+     ES+  +F     +DV+TWNA+I+   +N      +  
Sbjct: 253 RGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILL 312

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E+ +  +  TL  ++SA   +  L  G+ +   + + G   D  +    ++MYAK
Sbjct: 313 FHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 372

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G L++++  F  M   +  SWN ++S    +   ++ L  F+ M   G  A    ++  
Sbjct: 373 SGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFV 432

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              SAC         +HA  +  GY           L  M S            +G+  K
Sbjct: 433 GLLSAC---------VHAGLVDEGYR----------LFDMMS----------TLFGLVPK 463

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLC 288
            +  ++ ++D  A  G   EA+DL+ +M      +PD  T+  L+  C
Sbjct: 464 -IEHYSCMVDLLARAGHLYEAWDLIRKM----PEKPDKVTLGALLGAC 506


>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 257/486 (52%), Gaps = 34/486 (6%)

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYLCSQFSFSTLLA 373
            + + A LLF+ IAP  +  ++N MI  L             F  M+ L    +  T   
Sbjct: 62  KNFTYASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPF 121

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
              SC +   L   ++ H    KL   ++    ++L+ MY  CG +  A  +   I    
Sbjct: 122 FFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRR- 180

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
           D   WN +I    + G  +EA++ F  M ++    PD ++LV+V+ ACG L     G+ +
Sbjct: 181 DLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWV 240

Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
            G  ++  M L++ + +ALI+MY +C D+ SA  +F+     ++ TWN +IS ++QN   
Sbjct: 241 EGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMA 300

Query: 554 VRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
             A+ LF  ++ +    N+I++ ++LSAC  +G L  GKQI  +    GFQ + F+++AL
Sbjct: 301 DEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATAL 360

Query: 611 LDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG--IRP 653
           +DMY+ C               K+ A+W++MISA   HGK  EA+ LF  M + G   RP
Sbjct: 361 IDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARP 420

Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF 713
              + + LLSAC H+GLV+EG + ++ M   + + P+ EH+ C+VD+L R+G L EA++ 
Sbjct: 421 NDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDL 480

Query: 714 IKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRW 773
           I+ +P +P     GA+L AC    +  +G++V  ++ +++P N G YI  S +Y  L  W
Sbjct: 481 IEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMW 540

Query: 774 KDAVEI 779
           +D+  +
Sbjct: 541 EDSARM 546



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 214/441 (48%), Gaps = 48/441 (10%)

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
           ++YP    L+ R M  S    +       ++  A L  LS  +  H+L  KL     P+ 
Sbjct: 95  HHYPLALTLFHRMMSLSLSPNNFTFPFFFLSC-ANLAVLSPARAAHSLVFKLALHSDPHT 153

Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
             T+SLI+MYS+CG +  A + F  +  +D+VSWN++I G+A  G   EA ++  EM   
Sbjct: 154 --THSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRR 211

Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
              EPD  ++V+++  C +   L  GR V G+ + R +  +  + ++L+  Y+K   L  
Sbjct: 212 DGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGS 271

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A  +F+ +A   D+++WN++ISG            LF  M   C   +  TL A+L +C 
Sbjct: 272 ARRIFDGMAA-RDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACA 330

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
           +  +L+ GK I  +  + GF ++     AL+ MY  CG L +A  + + +   ++ S WN
Sbjct: 331 TIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEAS-WN 389

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQ-QNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
            +I A   +G  +EA+  F+ M+ +   A P+ +T V ++SAC +  L  EG  L  + +
Sbjct: 390 AMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDM-M 448

Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
            +L GL  ++++                             ++CM+   ++      A +
Sbjct: 449 STLFGLVPKIEH-----------------------------YSCMVDLLARAGHLYEAWD 479

Query: 559 LFRHLEFEPNEISIVSILSAC 579
           L   +  +P+++++ ++L AC
Sbjct: 480 LIEKMPEKPDKVTLGALLGAC 500



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 192/397 (48%), Gaps = 28/397 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM-VEE 67
           T+ SL+T YS       +  +F E   +D+V+WN+MI    +  C    +  FGEM   +
Sbjct: 153 TTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRD 212

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
           G   D  +L+ ++ A  ++  L+ GR V    ++ GM  +S + +  ++MYAKCGDL S+
Sbjct: 213 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSA 272

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
              F GM   D ++WN ++SG   N   ++ +  F  M       + ++L++ ++A A +
Sbjct: 273 RRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATI 332

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G L  GK I     + G++   +V+   +LI MY++CG + +A+R F  M  K+  SWNA
Sbjct: 333 GALDLGKQIDEYASQRGFQHDIFVA--TALIDMYAKCGSLASAQRVFKEMPQKNEASWNA 390

Query: 248 IIDGFALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
           +I   A +GK +EA  L   M        P+  T V L+S C  + L+ E          
Sbjct: 391 MISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNE---------- 440

Query: 307 RLLGYDLL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQ 365
              GY L  MM++L     K    S           M DL++    +   +  +  +  +
Sbjct: 441 ---GYRLFDMMSTLFGLVPKIEHYS----------CMVDLLARAGHLYEAWDLIEKMPEK 487

Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
               TL A+L +C S ++++ G+ +    L++  SN+
Sbjct: 488 PDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNS 524



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 192/404 (47%), Gaps = 46/404 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           L   R  H L  K  + +D    +  + MY++CG +  +   F  +   D VSWN++++G
Sbjct: 132 LSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAG 191

Query: 149 CLHNNYPEKCLLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
                   + +  F EMG   G + D +SL S + A   LG+L  G+ +    ++ G   
Sbjct: 192 YAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTL 251

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           + Y+   ++LISMY++CGD+ +A R F GM  +DV++WNA+I G+A NG  +EA  L H 
Sbjct: 252 NSYIG--SALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHA 309

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+     E  I T+  ++S CA    L  G+ +  YA +R   +D+ +  +L+D Y+K  
Sbjct: 310 MKEDCVTENKI-TLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCG 368

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
           SL+ A+ +F  + P  +  SWN+MIS        L S       L++   C S E     
Sbjct: 369 SLASAQRVFKEM-PQKNEASWNAMISA-------LASHGKAKEALSLF-QCMSDEG---- 415

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCG---------DLVAA-FSLLQRISHNSDTSC 437
                     G   N I    L+   ++ G         D+++  F L+ +I H      
Sbjct: 416 ---------GGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEH------ 460

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
           ++ ++    + GH  EA    + M ++    PD VTL  ++ AC
Sbjct: 461 YSCMVDLLARAGHLYEAWDLIEKMPEK----PDKVTLGALLGAC 500



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 130/312 (41%), Gaps = 38/312 (12%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG   +    ++L++ Y+      S+  +F     +DV+TWNA+I+   +N      +  
Sbjct: 247 RGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISL 306

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F  M E+ +  +  TL  ++SA   +  L  G+ +   + + G   D  +    ++MYAK
Sbjct: 307 FHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAK 366

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CG L S++  F  M   +  SWN ++S    +   ++ L  F+ M   G  A    ++  
Sbjct: 367 CGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFV 426

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
              SAC         +HA  +  GY           L  M S            +G+  K
Sbjct: 427 GLLSAC---------VHAGLVNEGYR----------LFDMMS----------TLFGLVPK 457

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
            +  ++ ++D  A  G   EA+DL+ +M      +PD  T+  L+  C     +  G  V
Sbjct: 458 -IEHYSCMVDLLARAGHLYEAWDLIEKM----PEKPDKVTLGALLGACRSKKNVDIGERV 512

Query: 301 HGYAIRRLLGYD 312
               IR +L  D
Sbjct: 513 ----IRMILEVD 520


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/417 (34%), Positives = 237/417 (56%), Gaps = 20/417 (4%)

Query: 381  PESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNI 440
            P +L   + +H      G   N I  N L+  Y     L  A+ L   +    D+  W++
Sbjct: 748  PTNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMC-VRDSVSWSV 806

Query: 441  VIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
            ++    + G +     TF+ + +   A PD+ TL  VI AC +L+    G+ +H +  K 
Sbjct: 807  MVGGFAKVGDYMNCFGTFRELIRC-GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 865

Query: 501  LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
             + LD  V  AL+ MYG+CR+I+ A  +F+     +L TW  MI  +++      +L LF
Sbjct: 866  GLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLF 925

Query: 561  RHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
              +  E   P+++++V+++ AC +LG +   + I  ++    FQ +  + +A++DM++ C
Sbjct: 926  DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 985

Query: 618  ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
                           K+  +WS+MI+AYGYHG+G +A++LF  M  SGI P K +++SLL
Sbjct: 986  GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLL 1045

Query: 663  SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
             ACSH+GLV+EGL++++ M E+Y VR + +H+ C+VD+LGR+G+L EA + I ++  +  
Sbjct: 1046 YACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105

Query: 723  PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             G+WGA L AC  H D  + ++ A  L +L+P+N G+YI LSN+Y   GRW+D  +I
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKI 1162



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 138/410 (33%), Positives = 236/410 (57%), Gaps = 20/410 (4%)

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
           + +H      G   N +  N L++ Y     L  A+ L   +    D+  W++++    +
Sbjct: 79  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC-VRDSVSWSVMVGGFAK 137

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            G +     TF+ + +   A PD+ TL  VI AC +L+    G+ +H +  K  + LD  
Sbjct: 138 VGDYINCFGTFRELIRC-GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 196

Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE- 566
           V  AL+ MY +CR+I+ A  +F+     +L TW  MI  +++      +L LF  +  E 
Sbjct: 197 VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 256

Query: 567 --PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------- 617
             P+++++V+++ AC +LG +   + I  ++    FQ +  + +A++DMY+ C       
Sbjct: 257 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 316

Query: 618 --------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
                   K+  +WS+MI+AYGYHG+G +A++LF  M +SG+ P K ++ SLL ACSH+G
Sbjct: 317 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAG 376

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           LV+EGL+++++M E+Y VR + +H+ C+VD+LGR+G+L EA + IK++ I+   G+WGA 
Sbjct: 377 LVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAF 436

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           L AC  H D  + ++ A  L +L+ +N G+Y+ LSN+Y   GRW+D  +I
Sbjct: 437 LGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKI 486



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 167/358 (46%), Gaps = 12/358 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G L ++  +  L+  YS     + +  LF   C +D V+W+ M+    +    +     F
Sbjct: 89  GMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTF 148

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            E++  G R D+ TL  ++ A   +  L+ GR++H +  K G+  D  +C   V+MY KC
Sbjct: 149 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC 208

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
            ++  +   F  M   D V+W  ++ G        + L+ F +M   G   D V++ + V
Sbjct: 209 REIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVV 268

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A A LG +   ++I     +  ++    V +  ++I MY++CG +E+A   F  M  K+
Sbjct: 269 FACAKLGAMHKARIIDDYIQRKKFQLD--VILGTAMIDMYAKCGCVESAREIFDRMEEKN 326

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
           V+SW+A+I  +  +G+  +A DL   M L   + PD  T+ +L+  C+ + L+ EG    
Sbjct: 327 VISWSAMIAAYGYHGQGRKALDLF-PMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFF 385

Query: 301 ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
                 Y++R     D+     ++D   ++  L +A  L  ++    D   W + +  
Sbjct: 386 SSMWEDYSVRT----DVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 189/423 (44%), Gaps = 24/423 (5%)

Query: 80  VSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADT 139
           +SAL     L Q R VH  +   GM+ +  + N  +  Y+    L+ +   F GM   D+
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 140 VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL 199
           VSW+ ++ G         C   FRE+   G + DN +L   + A   L  L  G++IH +
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 200 GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFE 259
             K G +   +V    +L+ MY +C +IE A   F  M  +D+V+W  +I G+A  GK  
Sbjct: 186 VYKFGLDLDHFVCA--ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243

Query: 260 EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
           E+  L  +M+    V PD   +VT++  CA    + + R +  Y  R+    D+++  ++
Sbjct: 244 ESLVLFEKMR-EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 302

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +D Y+K   +  A  +F+ +   N ++SW++MI+             LF  ML       
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEKN-VISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPD 361

Query: 368 FSTLLAILPSCNSP----ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
             TL ++L +C+      E L F  S+  W+       +      ++ +    G L  A 
Sbjct: 362 KITLASLLYACSHAGLVEEGLRFFSSM--WE-DYSVRTDVKHYTCVVDLLGRAGRLDEAL 418

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACG 482
            L++ ++   D   W   + AC  +     A K   S+ + Q+ +P   V L N+ +  G
Sbjct: 419 KLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478

Query: 483 NLE 485
             E
Sbjct: 479 RWE 481



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 176/381 (46%), Gaps = 12/381 (3%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            G L +L  +  L+  YS     + +  LF   C +D V+W+ M+    +    +     F
Sbjct: 765  GMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTF 824

Query: 62   GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             E++  G R D+ TL  ++ A   +  L+ GR++H +  K G+  D  +C   V+MY KC
Sbjct: 825  RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC 884

Query: 122  GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
             ++  +   F  M   D V+W  ++ G        + L+ F +M   G   D V++ + V
Sbjct: 885  REIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVV 944

Query: 182  AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             A A LG +   + I     +  ++    V +  ++I M+++CG +E+A   F  M  K+
Sbjct: 945  FACAKLGAMHKARTIDDYIQRKKFQLD--VILGTAMIDMHAKCGCVESAREIFDRMEEKN 1002

Query: 242  VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV- 300
            V+SW+A+I  +  +G+  +A DL   M L   + P+  T+V+L+  C+ + L+ EG    
Sbjct: 1003 VISWSAMIAAYGYHGQGRKALDLF-PMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 1061

Query: 301  ----HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
                  Y++R     D+     ++D   ++  L +A  L  ++    D   W + +    
Sbjct: 1062 SXMWEDYSVR----XDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACR 1117

Query: 357  KEMLYLCSQFSFSTLLAILPS 377
                   ++ + ++LL + P 
Sbjct: 1118 THKDVXLAEKAATSLLELQPQ 1138



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 183/412 (44%), Gaps = 20/412 (4%)

Query: 89   LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            L Q R VH  +   GM+ +  + N  V  Y+    L+ +   F GM   D+VSW+ ++ G
Sbjct: 751  LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810

Query: 149  CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
                     C   FRE+   G + DN +L   + A   L  L  G++IH +  K G +  
Sbjct: 811  FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLD 870

Query: 209  PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
             +V    +L+ MY +C +IE A   F  M  +D+V+W  +I G+A  G   E+  L  +M
Sbjct: 871  HFVCA--ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928

Query: 269  QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            +    V PD   +VT++  CA    + + R++  Y  R+    D+++  +++D ++K   
Sbjct: 929  R-EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987

Query: 329  LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
            +  A  +F+ +   N ++SW++MI+             LF  ML      +  TL+++L 
Sbjct: 988  VESAREIFDRMEEKN-VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046

Query: 377  SCNSPESLEFGKSIHC--WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
            +C+    +E G       W+       +      ++ +    G L  A  L+  ++   D
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWE-DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKD 1105

Query: 435  TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLE 485
               W   + AC  +     A K   S+ + Q  +P   + L N+ +  G  E
Sbjct: 1106 EGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWE 1157



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 28/285 (9%)

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
           ISA  N     + + +H  A    M  +  V N LI  Y   R +  A  +F+     + 
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125

Query: 538 CTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
            +W+ M+  F++    +     FR L      P+  ++  ++ AC  L  L+ G+ IH  
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHI 185

Query: 595 VFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMISAYGYHGKGWEA 639
           V+  G   + F+ +AL+DMY  C+                   W+ MI  Y   GK  E+
Sbjct: 186 VYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANES 245

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---- 695
           + LF +M   G+ P K ++++++ AC+  G + +       ++++Y  R + +  V    
Sbjct: 246 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-----RIIDDYIQRKKFQLDVILGT 300

Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
            ++DM  + G ++ A E    +  +     W AM++A  +HG  +
Sbjct: 301 AMIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGR 344


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 186/639 (29%), Positives = 323/639 (50%), Gaps = 46/639 (7%)

Query: 170 EQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEA 229
           E  D V L   V ++   G+L++GK++H+  IK  +   P + + N+L++MY +CGD  +
Sbjct: 58  ESVDYVKL---VQSATKTGKLNHGKLVHSHMIKTSFR--PCLFLQNNLLNMYCKCGDTRS 112

Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
           A++ F  M+  ++V++N++I G+      ++   L  + + +  ++ D  T    ++ C+
Sbjct: 113 ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRL-GLKLDKYTCAGALTACS 171

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            S  L  G+ +HG  +   LG  +++ NSL+D YSK   +  A +LF+    + D VSWN
Sbjct: 172 QSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL-DGVSWN 230

Query: 350 SMISGL-----FKEMLYLCSQ-------FSFSTLLAILPSCNSPES--LEFGKSIHCWQL 395
           S+I+G      ++E+L +  +       F+  TL + L +C+S  +    FG  +H   +
Sbjct: 231 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAI 290

Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE-- 453
           KLG   + +   AL+ MY   G L  A  +  ++  + +   +N ++    Q    ++  
Sbjct: 291 KLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMV-DKNVVMYNAMMAGLLQQETIEDKC 349

Query: 454 ---AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN 510
              A+  F  M +     P   T  +++ AC  +E     K +H L  K+ +  D  + +
Sbjct: 350 AYKALNLFFEM-KSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGS 408

Query: 511 ALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEP 567
            LI +Y     +  A   F S +N  +     MI  + QN     AL LF  L   E +P
Sbjct: 409 ILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKP 468

Query: 568 NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA----- 622
           +E    +I+S+C  +G+LR G+QI GH   +G    +   ++ + MY+      A     
Sbjct: 469 DEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 528

Query: 623 ----------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
                     WS+MI +   HG   EA+  F  M + GI P   + + +L ACSH GLV+
Sbjct: 529 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 588

Query: 673 EGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSA 732
           EGL+Y++ M ++Y ++   +H VC+VD+LGR+G+L +A   I  L  + +P +W A+LSA
Sbjct: 589 EGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA 648

Query: 733 CSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
           C  H DT   ++VA+ + +LEP     Y+ L N+Y+  G
Sbjct: 649 CRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAG 687



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 266/541 (49%), Gaps = 30/541 (5%)

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S   + +V + T+   L  G++VH   IK        L N  +NMY KCGD  S++  
Sbjct: 57  LESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M  ++ V++N+++SG +  +  +K ++ F +    G + D  + + A+ A +  G L
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
           S GK+IH  G+ L Y     V +TNSLI MYS+CG ++ A   F      D VSWN++I 
Sbjct: 177 SAGKMIH--GLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIA 234

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAIRRL 308
           G+  NGK+EE   +L +M     +  +  T+ + +  C+ +       G  +H +AI+  
Sbjct: 235 GYVQNGKYEELLTILQKMH-QNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLG 293

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------------- 354
           L  D+++  +L+D Y+K+ SL  A  +F+ +   N +V +N+M++G              
Sbjct: 294 LHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKN-VVMYNAMMAGLLQQETIEDKCAYK 352

Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALM 410
              LF EM     + S  T  ++L +C   E  +F K +H    K G  S+  IG + L+
Sbjct: 353 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIG-SILI 411

Query: 411 HMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
            +Y   G ++ A      I HN        +I    QNG F+ A+  F  +   +   PD
Sbjct: 412 DLYSVLGSMMDALLCFNSI-HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEE-KPD 469

Query: 471 SVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
                 ++S+C N+ +   G+ + G A K  +   T  QN+ I MY +  D+ +A+  F+
Sbjct: 470 EFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQ 529

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
              N ++ +W+ MI + +Q+   + AL  F  ++    EPN  + + +L AC+  G++  
Sbjct: 530 QMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEE 589

Query: 588 G 588
           G
Sbjct: 590 G 590



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 264/578 (45%), Gaps = 28/578 (4%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           +LL  Y       S+  LF +    ++VT+N++I+  V+   +   +  F +    G++ 
Sbjct: 99  NLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKL 158

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  T    ++A +Q   L  G+++H L +  G+ +   L N  ++MY+KCG ++ +   F
Sbjct: 159 DKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILF 218

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA--SACLGE 189
                 D VSWN++++G + N   E+ L   ++M  +G   +  +L SA+ A  S   G 
Sbjct: 219 DHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGC 278

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
             +G ++H   IKLG      V V  +L+ MY++ G ++ A + F  M  K+VV +NA++
Sbjct: 279 KMFGTMLHDHAIKLGLHLD--VVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMM 336

Query: 250 DGFALNGKFEE-----AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
            G       E+     A +L  EM+    ++P + T  +L+  C      +  + VH   
Sbjct: 337 AGLLQQETIEDKCAYKALNLFFEMKSC-GIKPSMFTYSSLLKACIIVEDFKFAKQVHALM 395

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
            +  L  D  + + L+D YS   S+  A L FN+I  +  +V   +MI G          
Sbjct: 396 CKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLT-IVPMTAMIXGYLQNGEFESA 454

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF E+L    +        I+ SC +   L  G+ I     K+G S  TI  N+ + M
Sbjct: 455 LSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWM 514

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y   GDL AA    Q++  N D   W+ +I +  Q+GH  EA++ F+ M +     P+  
Sbjct: 515 YAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGHAMEALRFFELM-KSCGIEPNHF 572

Query: 473 TLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFE 530
             + V+ AC +  L  EG +    +     M L  +    ++ + GR   +  A S +  
Sbjct: 573 AFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILR 632

Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRH-LEFEP 567
             +      W  ++SA   +K  V A  + +  +E EP
Sbjct: 633 LGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEP 670



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 226/510 (44%), Gaps = 39/510 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G  + +  + SL+  YS     + +  LF  +   D V+WN++I   V+N      L   
Sbjct: 190 GLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTIL 249

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQ--MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            +M + G+ F++ TL   + A +     C   G ++H  +IK G+  D  +    ++MYA
Sbjct: 250 QKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYA 309

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE-----KCLLYFREMGWSGEQADN 174
           K G L+ +   F  M   + V +N +M+G L     E     K L  F EM   G +   
Sbjct: 310 KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 369

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            + SS + A   + +  + K +HAL  K G     Y+   + LI +YS  G +  A   F
Sbjct: 370 FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIG--SILIDLYSVLGSMMDALLCF 427

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             +    +V   A+I G+  NG+FE A  L +E+ L    +PD     T++S CA+  +L
Sbjct: 428 NSIHNLTIVPMTAMIXGYLQNGEFESALSLFYEL-LTYEEKPDEFIXSTIMSSCANMGML 486

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
           R G  + G+A +  +    +  NS +  Y+KS  L  A L F  +    D+VSW++MI  
Sbjct: 487 RSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMEN-PDIVSWSTMICS 545

Query: 355 -----------LFKEMLYLC----SQFSFSTLLAILPSCNS----PESLEFGKSIHC-WQ 394
                       F E++  C    + F+F   L +L +C+      E L +  ++   ++
Sbjct: 546 NAQHGHAMEALRFFELMKSCGIEPNHFAF---LGVLIACSHRGLVEEGLRYFDTMEKDYK 602

Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
           +KL   +    V+ L       G L  A SL+ R+    +   W  ++ AC  +     A
Sbjct: 603 MKLHVKHCVCVVDLLG----RAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTA 658

Query: 455 IKTFKSMTQQQN-ASPDSVTLVNVISACGN 483
            +  + + + +  AS   V L N+    GN
Sbjct: 659 QRVAQKVIELEPLASASYVLLYNIYMDAGN 688


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 282/544 (51%), Gaps = 35/544 (6%)

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
           L+  V+ ++ T + +++   D   LR+G+ +H          D+ +  +L++ Y+K  SL
Sbjct: 2   LLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSL 61

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
           + A  +F+ + P   + +WNSMIS             +F+ M +   +    T L+IL +
Sbjct: 62  TDARKVFDGM-PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
           C +PE+L+ GK +     +  F  +     AL+ MY  C     A  +  R+   +  + 
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT- 179

Query: 438 WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLA 497
           W+ +I A   +GH  EA++ F+ M QQ+   P+ VT +++++         E   +H L 
Sbjct: 180 WSAIITAFADHGHCGEALRYFR-MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 238

Query: 498 LKSLMGLDTRVQNALITMYGRCR--DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
            +  +   T + NAL+ +YGRC   ++  A  + +      +  WN +I+ ++ +     
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSRE 298

Query: 556 ALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           ALE ++ L+ E    ++++ +S+L+ACT    L  GK IH +    G   +  + +AL +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358

Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
           MYS C               +S  +W+ M+ AY  HG+  E ++L  +M   G++    +
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418

Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
            +S+LS+CSH+GL+ EG QY++++  +  +  +TEH+ C+VD+LGR+GKLQEA ++I  +
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478

Query: 718 PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAV 777
           P +P+   W ++L AC  H D   GK  A  L +L+P N    + LSN+Y   G WK+A 
Sbjct: 479 PSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAA 538

Query: 778 EIGK 781
           ++ +
Sbjct: 539 KLRR 542



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 242/531 (45%), Gaps = 23/531 (4%)

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M+ EG++ +  T L +++++   + L++G+ +H    ++    D  +    VN Y KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L  +   F GM C    +WN+++S    +    +    F+ M   GE+ D V+  S + A
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
                 L +GK +     +  +E   +V    +LI+MY++C   E A + F  M  K+++
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGT--ALITMYARCRSPENAAQVFGRMKQKNLI 178

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +W+AII  FA +G   EA      MQ    + P+  T ++L++       L E   +H  
Sbjct: 179 TWSAIITAFADHGHCGEALRYFRMMQ-QEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237

Query: 304 AIRRLLGYDLLMMNSLMDFYSK--SNSLSKAELLFNAIAPMNDLVSWNSMISGLF----- 356
                L     M N+L++ Y +  +  L  AE++   +     + +WN +I+G       
Sbjct: 238 ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQ-ITAWNVLINGYTLHGRS 296

Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
           +E L    +           T +++L +C S  SL  GK IH   ++ G  ++ I  NAL
Sbjct: 297 REALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNAL 356

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            +MY  CG +  A  +   +   S  S WN ++ A  Q+G  +E +K  + M +Q+    
Sbjct: 357 TNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESEEVLKLIRKM-EQEGVKL 414

Query: 470 DSVTLVNVISACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST- 527
           + +T V+V+S+C +  L  EG +  H L     + + T     L+ + GR   ++ A   
Sbjct: 415 NGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKY 474

Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRA-LELFRHLEFEPNEISIVSILS 577
           + +      + TW  ++ A   +K   R  L   + LE +P   S   +LS
Sbjct: 475 ISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLS 525



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 240/533 (45%), Gaps = 30/533 (5%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T+L+  Y+       +  +F     + V TWN+MI+A   +         F  M  EG 
Sbjct: 48  NTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGE 107

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           R D  T L I+ A      L+ G+ V     +     D  +    + MYA+C    ++  
Sbjct: 108 RCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQ 167

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SLSSAVAASAC 186
            F  M   + ++W+ I++    + +  + L YFR M   G   + V   SL +     + 
Sbjct: 168 VFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 227

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVS 244
           L ELS    IH L  + G +D+   +++N+L+++Y +C  G+++ AE     M  + + +
Sbjct: 228 LEELSR---IHLLITEHGLDDT--TTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA 282

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           WN +I+G+ L+G+  EA +    +QL  ++  D  T +++++ C  S  L EG+ +H  A
Sbjct: 283 WNVLINGYTLHGRSREALETYQRLQL-EAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 341

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEM 359
           +   L  D+++ N+L + YSK  S+  A  +F+++ P+   VSWN M+      G  +E+
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSM-PIRSAVSWNGMLQAYAQHGESEEV 400

Query: 360 LYLCSQFSFS-------TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
           L L  +           T +++L SC+    +  G +  H      G    T     L+ 
Sbjct: 401 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 460

Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA-IKTFKSMTQQQNASPD 470
           +    G L  A   + ++    +   W  ++ AC  +       +   K +      S  
Sbjct: 461 LLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSA 520

Query: 471 SVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDT-RVQNALITMYGRCRD 521
           SV L N+ S  G+ + A +  +++    +K + G+ + +V+N +     R RD
Sbjct: 521 SVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEF--RVRD 571



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 177/353 (50%), Gaps = 6/353 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F   L   T+L+T Y+     E++  +F     K+++TW+A+ITA  ++      L +F 
Sbjct: 142 FELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFR 201

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC- 121
            M +EGI  +  T + +++  T  + L++   +H L  + G+   +++ N  VN+Y +C 
Sbjct: 202 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE 261

Query: 122 -GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
            G+L+ +E     M      +WN +++G   +    + L  ++ +       D V+  S 
Sbjct: 262 TGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISV 321

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           + A      L+ GK+IH+  ++ G +    V V N+L +MYS+CG +E A R F  M  +
Sbjct: 322 LNACTSSTSLAEGKMIHSNAVECGLDSD--VIVKNALTNMYSKCGSMENARRIFDSMPIR 379

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-RS 299
             VSWN ++  +A +G+ EE   L+ +M+    V+ +  T V+++S C+ + L+ EG + 
Sbjct: 380 SAVSWNGMLQAYAQHGESEEVLKLIRKME-QEGVKLNGITFVSVLSSCSHAGLIAEGCQY 438

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            H     R +         L+D   ++  L +AE   + +    ++V+W S++
Sbjct: 439 FHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491


>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
 gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 162/502 (32%), Positives = 268/502 (53%), Gaps = 40/502 (7%)

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L++ NSL+  Y+K   L  A  LF+ + PM D++S N +  G            L K ML
Sbjct: 90  LVVWNSLLSLYAKCGKLVDAIKLFDEM-PMRDVISQNIVFYGFLRNRETESGFVLLKRML 148

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                F  +TL  +L  C++PE     K IH   +  G+       N L+  Y  CG  V
Sbjct: 149 G-SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +   +   +SH  +      VI    +N   ++ ++ F S+ ++    P+SVT ++ ++A
Sbjct: 208 SGRGVFDGMSHR-NVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAA 265

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C   +   EG+ +H L  K  +  +  +++AL+ MY +C  I+ A T+FES    +  + 
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325

Query: 541 NCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSAC-TQLGVLRHGKQIHGH 594
             ++   +QN +E  A++ F  +     E + N +S V  +S     LG+   GKQ+H  
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL---GKQLHSL 382

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           V    F  N+F+++ L++MYS C               ++  +W+SMI+A+  HG G  A
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAA 442

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++L+ EM    ++PT  + +SLL ACSH GL+D+G +  N M E + + P TEH+ CI+D
Sbjct: 443 LKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           MLGR+G L+EA  FI +LP++P   +W A+L ACS HGDT++G+  AE LF+  P++   
Sbjct: 503 MLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSA 562

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           +I ++N+Y + G+WK+  +  K
Sbjct: 563 HILIANIYSSRGKWKERAKTIK 584



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 221/456 (48%), Gaps = 31/456 (6%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +++YAKCG L  +   F  M   D +S N +  G L N   E   +  + M  SG  
Sbjct: 94  NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-G 152

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D+ +L+  ++           K+IHAL I  GY+    +SV N LI+ Y +CG   +  
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKE--ISVGNKLITSYFKCGCSVSGR 210

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCA 289
             F GM+ ++V++  A+I G   N   E+   L     LMR   V P+  T ++ ++ C+
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLF---SLMRRGLVHPNSVTYLSALAACS 267

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            S  + EG+ +H    +  +  +L + ++LMD YSK  S+  A  +F +   +++ VS  
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE-VSMT 326

Query: 350 SMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
            ++ GL            F  ML    +   + + A+L       SL  GK +H   +K 
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            FS NT   N L++MY  CGDL  + ++ +R+   +  S WN +I A  ++GH   A+K 
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIAAFARHGHGLAALKL 445

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITM 515
           ++ MT  +   P  VT ++++ AC ++ L  +G+ L    +K + G++ R ++   +I M
Sbjct: 446 YEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELLN-EMKEVHGIEPRTEHYTCIIDM 503

Query: 516 YGRCRDIKSASTVFESC---YNCNLCTWNCMISAFS 548
            GR   +K A +  +S     +C +  W  ++ A S
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKI--WQALLGACS 537



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 247/532 (46%), Gaps = 64/532 (12%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V NSL+S+Y++CG +  A + F  M  +DV+S N +  GF  N + E  F LL  M  + 
Sbjct: 92  VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--LG 149

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLS 330
           S   D AT+  ++S+C         + +H  AI  L GYD  + + N L+  Y K     
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAI--LSGYDKEISVGNKLITSYFKCGCSV 207

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSC 378
               +F+ ++  N +++  ++ISGL +  L+      FS            T L+ L +C
Sbjct: 208 SGRGVFDGMSHRN-VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +  + +  G+ IH    K G  +     +ALM MY  CG +  A+++ +  +   + S  
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS-M 325

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF------EGKS 492
            +++V   QNG  +EAI+ F  M  Q     D+    NV+SA   L ++F       GK 
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRML-QAGVEIDA----NVVSAV--LGVSFIDNSLGLGKQ 378

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           LH L +K     +T V N LI MY +C D+  + TVF      N  +WN MI+AF+++  
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438

Query: 553 EVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQENSFISS 608
            + AL+L+     LE +P +++ +S+L AC+ +G++  G+++   +  + G +  +   +
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHG--KGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
            ++DM           S I +       K W+A                     LL ACS
Sbjct: 499 CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQA---------------------LLGACS 537

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQEAYEFIKNL 717
             G  + G +Y    L  +   P++   H+ I ++    GK +E  + IK +
Sbjct: 538 FHGDTEVG-EYAAEQL--FQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 222/490 (45%), Gaps = 27/490 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL+ Y+       ++ LF E   +DV++ N +    + NR    G      M+  G  F
Sbjct: 95  SLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GF 153

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL I++S           +++H L+I +G   + S+ N  +  Y KCG   S    F
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + ++   ++SG + N   E  L  F  M       ++V+  SA+AA +    + 
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IHAL  K G E    + + ++L+ MYS+CG IE A   F   T  D VS   I+ G
Sbjct: 274 EGQQIHALLWKYGIESE--LCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331

Query: 252 FALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            A NG  EEA      M Q    ++ ++ + V  +S   +SL L  G+ +H   I+R   
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL--GKQLHSLVIKRKFS 389

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            +  + N L++ YSK   L+ ++ +F  + P  + VSWNSMI+             L++E
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRM-PKRNYVSWNSMIAAFARHGHGLAALKLYEE 448

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCG 417
           M  L  + +  T L++L +C+    ++ G+ +     ++ G    T     ++ M    G
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VT 473
            L  A S +  +    D   W  ++ AC+ +G  +      + + Q    +PDS    + 
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQ---TAPDSSSAHIL 565

Query: 474 LVNVISACGN 483
           + N+ S+ G 
Sbjct: 566 IANIYSSRGK 575



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 16/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +     L+T+Y       S   +F    +++V+T  A+I+  +EN     GL  F
Sbjct: 185 GYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF 244

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    +  +S T L  ++A +    + +G+ +H L  K G+ ++  + +  ++MY+KC
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC 304

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F      D VS   I+ G   N   E+ + +F  M  +G + D   +S+ +
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             S     L  GK +H+L IK  +  + +V+  N LI+MYS+CGD+  ++  F  M  ++
Sbjct: 365 GVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN--NGLINMYSKCGDLTDSQTVFRRMPKRN 422

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR--- 298
            VSWN++I  FA +G    A  L  EM  +  V+P   T ++L+  C+   L+ +GR   
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELL 481

Query: 299 ----SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                VHG   R            ++D   ++  L +A+   +++    D   W +++
Sbjct: 482 NEMKEVHGIEPRT------EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 51/378 (13%)

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP--------------------- 469
           H +    WN ++    + G   +AIK F  M  +   S                      
Sbjct: 86  HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145

Query: 470 --------DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                   D  TL  V+S C   E     K +H LA+ S    +  V N LIT Y +C  
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
             S   VF+   + N+ T   +IS   +N+     L LF   R     PN ++ +S L+A
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAW-------------- 623
           C+    +  G+QIH  ++  G +    I SAL+DMYS C S   AW              
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           + ++     +G   EAI+ F  M  +G+    + V ++L        +  G Q ++ +++
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
                  T  +  +++M  + G L ++    + +P +     W +M++A + HG      
Sbjct: 386 R-KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIAAFARHGHGLAAL 443

Query: 744 QVAELLFKLE--PENVGY 759
           ++ E +  LE  P +V +
Sbjct: 444 KLYEEMTTLEVKPTDVTF 461


>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
 gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
          Length = 604

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 164/608 (26%), Positives = 296/608 (48%), Gaps = 89/608 (14%)

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           KD++SWN+++  ++ +G  EE  +L  +M     VEPD  T  +++  C+   LL  G+ 
Sbjct: 2   KDLISWNSMVVAYSQHGHGEEMLELFRKMD----VEPDSITYASILGACSAMELLELGKE 57

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------ 353
           VH    R     D  +  +L++ YSK   L  A  +F+ I  + D   WN+MIS      
Sbjct: 58  VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSV-DPSPWNAMISGLVQHG 116

Query: 354 ------GLFKEM------------------------------------------LYLCSQ 365
                 GLF+ M                                          L L  Q
Sbjct: 117 RAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQ 176

Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
            S         T ++++ +C+S ++LE G+++      +G      G  AL+ +Y  CG+
Sbjct: 177 MSLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEE---GRTALLSLYAKCGN 233

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
           L AA  +  ++ +  +   WN +I A  Q+G  +EA++ ++ M +++   PD +T    +
Sbjct: 234 LEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELM-KEEGVQPDDITYAGAL 292

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
            AC +   + +G  +H    +S +  D  +  A++ MY +C ++++A + FE     N  
Sbjct: 293 GACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAV 352

Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           TW+ M+ AF Q+  +  AL+L+  +    F+P+EI++   L+AC+++G L+ GK IH  +
Sbjct: 353 TWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRI 412

Query: 596 FHLGFQENS-FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
                 +N  F+ ++LL+MY+ C               + + +W+++I  + +HG   E 
Sbjct: 413 QATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEV 472

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           + L  EM   G+ P   +   +L ACSH+GL+D G  ++ +M  E+ V  +TEH++C+VD
Sbjct: 473 LSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVD 532

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           +L R+G+++ A E + ++P +P    W  +L +     D   G + AE+   LEP +   
Sbjct: 533 LLSRAGRVESAEELVHSMPYEPPAMGWTTLLGSSEVQADLDRGSRYAEVAAGLEPGSSSS 592

Query: 760 YISLSNMY 767
           Y+ L N+Y
Sbjct: 593 YVLLWNIY 600



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 147/581 (25%), Positives = 246/581 (42%), Gaps = 85/581 (14%)

Query: 35  NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
           +KD+++WN+M+ A  ++      L  F +M    +  DS T   I+ A + M  L+ G+ 
Sbjct: 1   DKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELGKE 57

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           VH    ++   +D +L    +NMY+KCG L S+   F G+   D   WN ++SG + +  
Sbjct: 58  VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGR 117

Query: 155 PE-------------------------------------------------KCLLYFREM 165
                                                              K LL F +M
Sbjct: 118 AREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQM 177

Query: 166 GWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCG 225
              G + D  +  S + A + L  L  G+ +      +G E+        +L+S+Y++CG
Sbjct: 178 SLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEG-----RTALLSLYAKCG 232

Query: 226 DIEAAERAFWGMTC-KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           ++EAA   F  +   K+VVSWN++I  +A +G+  EA + L+E+     V+PD  T    
Sbjct: 233 NLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALE-LYELMKEEGVQPDDITYAGA 291

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMND 344
           +  C       +G  +H       +  D+ +  ++++ Y+K   L  A   F  +   N 
Sbjct: 292 LGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKN- 350

Query: 345 LVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
            V+W++M+              L+  M+    Q S  TL   L +C+   +L+ GK+IH 
Sbjct: 351 AVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHS 410

Query: 393 W-QLKLGFSNNTIGVNALMHMYINCGDLVAA---FSLLQRISHNSDTSCWNIVIVACTQN 448
             Q      N     N+L++MY  CG L  A   FS LQR     D+  WN +IV    +
Sbjct: 411 RIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQR----RDSFSWNTIIVGHAHH 466

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL--DT 506
           G   E +     M  Q    PD VT   V+ AC +  L   G+S H L+++   G+  DT
Sbjct: 467 GDVDEVLSLHGEMV-QDGVDPDYVTFACVLLACSHAGLLDRGRS-HFLSMEMEFGVAHDT 524

Query: 507 RVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA 546
                ++ +  R   ++SA  +  S  Y      W  ++ +
Sbjct: 525 EHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLLGS 565



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 232/518 (44%), Gaps = 78/518 (15%)

Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
           D +SWN+++     + + E+ L  FR+M     + D+++ +S + A + +  L  GK +H
Sbjct: 3   DLISWNSMVVAYSQHGHGEEMLELFRKMDV---EPDSITYASILGACSAMELLELGKEVH 59

Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
           A   +  ++  P  ++  +LI+MYS+CG +E+A R F G+   D   WNA+I G   +G+
Sbjct: 60  ARVSRSRFKSDP--ALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGR 117

Query: 258 FEEA---------------------FD----------------------------LLHEM 268
             EA                     FD                            L H+M
Sbjct: 118 AREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQM 177

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
            L   V+PD  T V++I  C+    L +GR+V   A    +G +     +L+  Y+K  +
Sbjct: 178 SL-EGVKPDARTFVSVIGACSSLQALEKGRAVEEQATS--MGIEE-GRTALLSLYAKCGN 233

Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCS-------QFSFSTLLAILP 376
           L  A  +F+ +    ++VSWNSMI     SG  +E L L         Q    T    L 
Sbjct: 234 LEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALG 293

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C S      G  IH    +     +     A+++MY  CG+L  A S  +++   +  +
Sbjct: 294 ACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVT 353

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W+ ++ A  Q+G+ +EA+  +  M   +   P  +TL   ++AC  +    EGK++H  
Sbjct: 354 -WSAMVGAFIQHGYDREALDLYLRMV-SEGFQPSEITLAGALAACSRIGALQEGKAIHSR 411

Query: 497 --ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
             A ++L      +QN+L+ MY +C  +  A+T+F +    +  +WN +I   + +    
Sbjct: 412 IQATETLQNC-LFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVD 470

Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
             L L   +     +P+ ++   +L AC+  G+L  G+
Sbjct: 471 EVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGR 508



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 162/374 (43%), Gaps = 77/374 (20%)

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           + D   WN ++VA +Q+GH +E ++ F+ M    +  PDS+T  +++ AC  +EL   GK
Sbjct: 1   DKDLISWNSMVVAYSQHGHGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGK 56

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
            +H    +S    D  +  ALI MY +C  ++SA  VF+   + +   WN MIS   Q+ 
Sbjct: 57  EVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHG 116

Query: 552 AEVRALELFRHLEFE--------------------------------------------- 566
               AL LF  ++ E                                             
Sbjct: 117 RAREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQ 176

Query: 567 -------PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
                  P+  + VS++ AC+ L  L  G+ +      +G +E     +ALL +Y+ C  
Sbjct: 177 MSLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGIEEG---RTALLSLYAKCGN 233

Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
                         K+  +W+SMI+AY   G+G EA+EL+  M   G++P   +    L 
Sbjct: 234 LEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALG 293

Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
           AC+  G   +G++ ++ + E   +R +      IV+M  + G+L+ A  + + +  +   
Sbjct: 294 ACTSYGGSAKGVEIHSRITES-KIRTDVFLDTAIVNMYAKCGELETAMSYFEKMR-RKNA 351

Query: 724 GVWGAMLSACSHHG 737
             W AM+ A   HG
Sbjct: 352 VTWSAMVGAFIQHG 365



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 170/345 (49%), Gaps = 6/345 (1%)

Query: 11  TSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           T+LL+ Y+     E++  +F +    K+VV+WN+MI A  ++      L  +  M EEG+
Sbjct: 222 TALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGV 281

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + D  T    + A T      +G  +H    ++ +  D  L    VNMYAKCG+L ++  
Sbjct: 282 QPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMS 341

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
            F  M   + V+W+ ++   + + Y  + L  +  M   G Q   ++L+ A+AA + +G 
Sbjct: 342 YFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGA 401

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
           L  GK IH+  I+        + + NSL++MY++CG +  A   F  +  +D  SWN II
Sbjct: 402 LQEGKAIHSR-IQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTII 460

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
            G A +G  +E   L  EM +   V+PD  T   ++  C+ + LL  GRS H  ++    
Sbjct: 461 VGHAHHGDVDEVLSLHGEM-VQDGVDPDYVTFACVLLACSHAGLLDRGRS-HFLSMEMEF 518

Query: 310 G--YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           G  +D      ++D  S++  +  AE L +++      + W +++
Sbjct: 519 GVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLL 563


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 169/572 (29%), Positives = 277/572 (48%), Gaps = 113/572 (19%)

Query: 317 NSLMDFYSKSNSLSKAELLFNAIAP-MNDLVSWNSMISG------------LFKEMLYLC 363
            SL+  Y+ ++ L  A   F+A+ P   D V  N++IS             +F+ +L   
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 364 S----QFSFSTLLAI---LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           S     +SF+ LL+    LP+     S+     +HC  LK G        NAL+ +Y+ C
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNI----SVRHCAQLHCSVLKSGAGGALSVCNALVALYMKC 207

Query: 417 ----------------------------------GDLVAAFSLLQRISHNSDTSCWNIVI 442
                                             GD+ AA S+ + +    D   WN +I
Sbjct: 208 ESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDV-VWNAMI 266

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
                +G   EA + F+ M  ++    D  T  +V+SAC N+ L   GKS+HG  ++   
Sbjct: 267 SGYVHSGMAVEAFELFRRMVLER-VPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQP 325

Query: 503 GLDTR----VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
                    V NAL+T Y +C +I  A  +F++    ++ +WN ++S + ++    +A+E
Sbjct: 326 NFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVE 385

Query: 559 LFRHLEFE----------------------------------PNEISIVSILSACTQLGV 584
           +F  + ++                                  P + +    ++AC +LG 
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGA 445

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSMISA 629
           L+HGKQ+HGH+  LGF+ ++   +AL+ MY+ C +               + +W++MISA
Sbjct: 446 LKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISA 505

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
            G HG G EA+ELF  M   GI P + S +++L+AC+HSGLVDEG +Y+ +M  ++ + P
Sbjct: 506 LGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIP 565

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
             +H+  ++D+LGR+G++ EA + IK +P +P P +W A+LS C   GD ++G   A+ L
Sbjct: 566 GEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQL 625

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           FK+ P++ G YI LSN Y A G W DA  + K
Sbjct: 626 FKMTPQHDGTYILLSNTYSAAGCWVDAARVRK 657



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 134/564 (23%), Positives = 234/564 (41%), Gaps = 96/564 (17%)

Query: 9   TSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           ++TSL+ AY+      ++++ F       +D V  NA+I+A          +  F  ++ 
Sbjct: 90  SATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLA 149

Query: 67  EG-IRFDSTTLLIIVSALTQMN--CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC-- 121
            G +R D  +   ++SA   +    ++    +HC  +K+G     S+CN  V +Y KC  
Sbjct: 150 SGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCES 209

Query: 122 --------------------------------GDLNSSECTFSGMHCADTVSWNTIMSGC 149
                                           GD+ ++   F  +     V WN ++SG 
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269

Query: 150 LHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSP 209
           +H+    +    FR M       D  + +S ++A A +G  ++GK +H   I+L     P
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329

Query: 210 --YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
              + V N+L++ YS+CG+I  A R F  MT KDVVSWN I+ G+  +   ++A ++  E
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 268 MQL----------------------------MRS--VEPDIATVVTLISLCADSLLLREG 297
           M                              MRS  V+P   T    I+ C +   L+ G
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHG 449

Query: 298 RSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
           + +HG+ ++  LG++      N+L+  Y++  ++ +A L+F  + P  D VSWN+MIS  
Sbjct: 450 KQLHGHIVQ--LGFEGSNSAGNALITMYARCGAVKEAHLMF-LVMPNIDSVSWNAMISAL 506

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNN 402
                      LF  M+         + L +L +CN    ++ G +     +   G    
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPG 566

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ----EAIKTF 458
                 L+ +    G +  A  L++ +      S W  ++  C  +G  +     A + F
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626

Query: 459 KSMTQQQNASPDSVTLVNVISACG 482
           K MT Q + +   + L N  SA G
Sbjct: 627 K-MTPQHDGT--YILLSNTYSAAG 647



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 217/493 (44%), Gaps = 101/493 (20%)

Query: 93  RVVHCLSIKAGMIADSSL-----CNV----FVNMYAKCGDLNSSECTFSGMHCA--DTVS 141
           R++H  ++   + A ++L     C V     V  YA    L ++   F  +  A  DTV 
Sbjct: 64  RLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVL 123

Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS--YGKVIHA 198
            N ++S     ++    +  FR +  SG  + D+ S ++ ++A   L  +S  +   +H 
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHC 183

Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQC---------------------------------- 224
             +K G   +  +SV N+L+++Y +C                                  
Sbjct: 184 SVLKSGAGGA--LSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRR 241

Query: 225 GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTL 284
           GD+ AA   F  +  K  V WNA+I G+  +G   EAF+L   M L R V  D  T  ++
Sbjct: 242 GDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLER-VPLDEFTFTSV 300

Query: 285 ISLCADSLLLREGRSVHGYAIRRLLGY----DLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
           +S CA+  L   G+SVHG  IR    +     L + N+L+ FYSK  +++ A  +F+ + 
Sbjct: 301 LSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMT 360

Query: 341 PMNDLVSWNSMISG------------LFKEMLY--------LCSQFSFS----------- 369
            + D+VSWN+++SG            +F+EM Y        + S +              
Sbjct: 361 -LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419

Query: 370 ------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
                       T    + +C    +L+ GK +H   ++LGF  +    NAL+ MY  CG
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
            +  A  L+  +  N D+  WN +I A  Q+GH +EA++ F  M   +   PD ++ + V
Sbjct: 480 AVKEA-HLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMV-AEGIYPDRISFLTV 537

Query: 478 ISACGNLELAFEG 490
           ++AC +  L  EG
Sbjct: 538 LTACNHSGLVDEG 550



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 170/447 (38%), Gaps = 99/447 (22%)

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
            +   +L+  Y     L AA S    +     DT   N VI A  +  H   A+  F+S+
Sbjct: 88  PVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSL 147

Query: 462 TQQQNASPDSVTLVNVISACGNLE--LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
               +  PD  +   ++SA G+L          LH   LKS  G    V NAL+ +Y +C
Sbjct: 148 LASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKC 207

Query: 520 R----------------------------------DIKSASTVFESCYNCNLCTWNCMIS 545
                                              D+ +A +VFE         WN MIS
Sbjct: 208 ESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMIS 267

Query: 546 AFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            +  +   V A ELFR +  E    +E +  S+LSAC  +G+  HGK +HG +  L  Q 
Sbjct: 268 GYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRL--QP 325

Query: 603 NSF------ISSALLDMYSNC--------------------------------------- 617
           N        +++AL+  YS C                                       
Sbjct: 326 NFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVE 385

Query: 618 -------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
                  K+  +W  M+S Y + G   +A++LF++M +  ++P   +    ++AC   G 
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGA 445

Query: 671 VDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAML 730
           +  G Q + +++ +            ++ M  R G ++EA+     +P       W AM+
Sbjct: 446 LKHGKQLHGHIV-QLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAMI 503

Query: 731 SACSHHGDTKMGKQVAELLFKLEPENV 757
           SA   HG    G++  EL  ++  E +
Sbjct: 504 SALGQHGH---GREALELFDRMVAEGI 527



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 36/299 (12%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCV---------- 54
           A LP + +L+T YS       +  +F     KDVV+WN +++  VE+ C+          
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 55  ---------VM------------GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGR 93
                    VM             L  F +M  E ++    T    ++A  ++  LK G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGK 450

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
            +H   ++ G    +S  N  + MYA+CG +  +   F  M   D+VSWN ++S    + 
Sbjct: 451 QLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           +  + L  F  M   G   D +S  + + A    G +  G   +   +K  +   P    
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEG-FRYFESMKRDFGIIPGEDH 569

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIIDGFALNGKFE---EAFDLLHEM 268
              LI +  + G I  A      M  +   S W AI+ G   +G  E    A D L +M
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKM 628



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 2/150 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        +L+T Y+     + +  +F    N D V+WNAMI+A  ++      L  F
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELF 519

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
             MV EGI  D  + L +++A      + +G R    +    G+I         +++  +
Sbjct: 520 DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGR 579

Query: 121 CGDLNSSECTFSGMHCADTVS-WNTIMSGC 149
            G +  +      M    T S W  I+SGC
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGC 609


>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
 gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
          Length = 506

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 261/491 (53%), Gaps = 34/491 (6%)

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSFS------- 369
            ++K  SL ++  +F+      D++ WNSMI     SG  +E + L      S       
Sbjct: 1   MFAKCGSLKESREVFDDC-RWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPN 59

Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             T   +L +C++ E+LE GK +H   +  GF  +    N+L++MY  CG +  A  +  
Sbjct: 60  AITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFD 119

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            +   +  S W  +I A  + GH +EA+  ++ M  +    P+ +T  +V+SAC +L   
Sbjct: 120 GMKQRTVVS-WTGIISAYVRKGHPREALDLYRKMGSE-GVEPNGITFASVLSACSSLGAL 177

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
            EGK++H     +    D  V NAL+++YG+C  + SA  VF+     N+ +W  MIS++
Sbjct: 178 EEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSY 237

Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL--GFQENSF 605
           + ++    A++L++ ++  PN +++ S+LSAC  LG    G+ +H  +     G   +  
Sbjct: 238 AHHRHSEEAIQLYKAMDVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEV 297

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + +ALL+MY+ C               +   +WS++I+AY  HG+G EA+E+   M   G
Sbjct: 298 LQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEG 357

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++ +     ++L+ACS +GL++    Y+  +  +     + E +VC+  +LGR+G+L EA
Sbjct: 358 VQASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEA 417

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
            E +  +P + +   W  +L+AC  H D + G +VAE+LF+LEP N   Y+ LSN+YVA 
Sbjct: 418 EELLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAA 477

Query: 771 GRWKDAVEIGK 781
           GR ++A  + +
Sbjct: 478 GRQEEAARVRR 488



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 229/483 (47%), Gaps = 40/483 (8%)

Query: 31  YETCN-KDVVTWNAMITACVENRCVVMGLHFFGEM--VEEGIRFDSTTLLIIVSALTQMN 87
           ++ C  KDV+ WN+MI A  ++      +  F  M      +  ++ T   +++A + + 
Sbjct: 15  FDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVE 74

Query: 88  CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
            L+QG+ VH   + AG   D++  N  VNMYAKCG +  +   F GM     VSW  I+S
Sbjct: 75  ALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIIS 134

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
             +   +P + L  +R+MG  G + + ++ +S ++A + LG L  GK +HA     GY+ 
Sbjct: 135 AYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYK- 193

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            P ++V N+L+S+Y +CG +++A + F  M  ++VVSW A+I  +A +   EEA  L   
Sbjct: 194 -PDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKA 252

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--DLLMMNSLMDFYSK 325
           M     V P+  T+ +++S CA      EGR+VH        G   D ++ N+L++ Y+K
Sbjct: 253 MD----VAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVLQNALLNMYAK 308

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFSTLLA------- 373
                 A  +F+A+A + D +SW+++I+     G   E + +C       + A       
Sbjct: 309 CGDGDAARKIFDAMA-VRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEGVQASSFIYGT 367

Query: 374 ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI-------NCGDLVAAFSLL 426
           +L +C+    LE  +         G      G  A +  Y+         G L  A  LL
Sbjct: 368 VLTACSQAGLLESARHY------FGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELL 421

Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--NASPDSVTLVNVISACGNL 484
             +   ++   W  ++ AC  +   +   +  + + + +  N +P  V L N+  A G  
Sbjct: 422 AVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAP-YVLLSNIYVAAGRQ 480

Query: 485 ELA 487
           E A
Sbjct: 481 EEA 483



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 226/497 (45%), Gaps = 53/497 (10%)

Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADN 174
           M+AKCG L  S   F      D + WN+++     + +P + +  F+ MG S    + + 
Sbjct: 1   MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
           ++ ++ +AA + +  L  GK +H   +  G++     +  NSL++MY++CG I  A   F
Sbjct: 61  ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFD--AAAENSLVNMYAKCGSITEAREVF 118

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
            GM  + VVSW  II  +   G   EA DL  +M     VEP+  T  +++S C+    L
Sbjct: 119 DGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMG-SEGVEPNGITFASVLSACSSLGAL 177

Query: 295 REGRSVHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
            EG++VH  A  +  GY  DL + N+L+  Y K  S+  A  +F+ +  + ++VSW +MI
Sbjct: 178 EEGKAVH--AQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRM-KIRNVVSWTAMI 234

Query: 353 SGLF-----KEMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIH--CWQLKLGFSN 401
           S        +E + L      +    TL ++L +C S  + E G+++H        G + 
Sbjct: 235 SSYAHHRHSEEAIQLYKAMDVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLAT 294

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
           + +  NAL++MY  CGD  AA  +   ++   DT  W+ +I A TQ+G   EA++  +SM
Sbjct: 295 DEVLQNALLNMYAKCGDGDAARKIFDAMAVR-DTMSWSTLIAAYTQHGRGGEAVEMCRSM 353

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            + +     S     V++AC    L    +   G  L    G   ++++           
Sbjct: 354 -ELEGVQASSFIYGTVLTACSQAGLLESARHYFGC-LTRDCGAPAKLED----------- 400

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQ 581
                             + CM +   +      A EL   + FE   ++ + +L+AC  
Sbjct: 401 ------------------YVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAACKA 442

Query: 582 LGVLRHGKQIHGHVFHL 598
              +  G ++   +F L
Sbjct: 443 HNDVERGARVAEVLFRL 459



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 170/361 (47%), Gaps = 21/361 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF        SL+  Y+       +  +F     + VV+W  +I+A V        L  +
Sbjct: 90  GFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLY 149

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M  EG+  +  T   ++SA + +  L++G+ VH     AG   D ++ N  V++Y KC
Sbjct: 150 RKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKC 209

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++S+   F  M   + VSW  ++S   H+ + E+ +  ++ M  +    + V+L+S +
Sbjct: 210 GSVDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKAMDVA---PNAVTLASVL 266

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMT 238
           +A A LG    G+ +H    KL    +   +   + N+L++MY++CGD +AA + F  M 
Sbjct: 267 SACASLGNAEEGRAVHE---KLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIFDAMA 323

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D +SW+ +I  +  +G+  EA ++   M+L   V+       T+++ C+ + LL   R
Sbjct: 324 VRDTMSWSTLIAAYTQHGRGGEAVEMCRSMEL-EGVQASSFIYGTVLTACSQAGLLESAR 382

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFY------SKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
              G   R     D      L D+        ++  L++AE L   +    + V+W  ++
Sbjct: 383 HYFGCLTR-----DCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLL 437

Query: 353 S 353
           +
Sbjct: 438 A 438


>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
 gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
          Length = 632

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 244/474 (51%), Gaps = 46/474 (9%)

Query: 348 WNSMISGLFKEMLY---------------LCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
           WNS+I+G  K   Y               L   ++ +T+  +   C+    L  GK IH 
Sbjct: 96  WNSLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKV---CHEIGDLNAGKLIHG 152

Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG--H 450
             LK GF  + I  N+LM MY  CG       L   +    +   WN+++     +G  +
Sbjct: 153 KSLKTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPER-NVGSWNVILSGYADSGDRN 211

Query: 451 FQEAIKTFKSMTQQQNASPDSVTLVNVISAC-GNLELAFEGKSLHGLALKSLM----GLD 505
           F + +  F    Q +   PD+ T+ ++++ C G++     G+ LHG  ++  +    G +
Sbjct: 212 FDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTE 271

Query: 506 TRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF 565
             +   LI MY R   +     VF+     N+  W  MI+   QN A    L LF  ++ 
Sbjct: 272 VHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQV 331

Query: 566 ----EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---- 617
               EPN++S+VS+L AC+ +  L   KQIHG+     F  +  + +AL+DMYS C    
Sbjct: 332 RDGVEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLD 391

Query: 618 ------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC 665
                       +   +WSSMIS YG HGKG EA+ ++++M   G +P   +++ +LSAC
Sbjct: 392 HAKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSAC 451

Query: 666 SHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV 725
           S +GLVDEGL  Y + + +Y ++P  E   C+VDMLGRSG+L +A ++IK +P++P P V
Sbjct: 452 SRAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSV 511

Query: 726 WGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           WGA++SA   HG+++M       L +LEPEN   Y+SLSN++ +  RW    E+
Sbjct: 512 WGAVVSASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEV 565



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 248/512 (48%), Gaps = 20/512 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  +   +T L++AY+       S  +F     K V  WN++I   V+NR       +F
Sbjct: 57  GFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWF 116

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M   G+  D  TL  +     ++  L  G+++H  S+K G + D  + N  ++MY+KC
Sbjct: 117 YQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKC 176

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLS 178
           G        F  M   +  SWN I+SG   +   N+ ++   + ++M   G + D  ++S
Sbjct: 177 GGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVS 236

Query: 179 SAVA-ASACLGELSYGKVIHA--LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
           S +   +  +G+  +G+ +H   + I+L       V +   LI MYS+   ++   R F 
Sbjct: 237 SLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFD 296

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
            M C++V +W A+I+G   NG  EE   L HEMQ+   VEP+  ++V+++  C+    L 
Sbjct: 297 RMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLT 356

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
             + +HGYAIR+    D+ + N+L+D YSK  SL  A+ +F   +   D +SW+SMISG 
Sbjct: 357 GVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGY 416

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
                      ++ +ML L ++    T++ +L +C+    ++ G  I+   +       T
Sbjct: 417 GLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKPT 476

Query: 404 IGVNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
           + + A ++ M    G L  A   ++ +      S W  V+ A   +G+ +     ++ + 
Sbjct: 477 VEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVSASIIHGNSEMQDLAYRFLV 536

Query: 463 QQQNASPDS-VTLVNVISACGNLELAFEGKSL 493
           Q +  +P + V+L N+ ++    ++  E +++
Sbjct: 537 QLEPENPSNYVSLSNLHASSRRWDVVSEVRTM 568



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 241/507 (47%), Gaps = 29/507 (5%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK  +  H   +  G   +  L    ++ YA  G    S   F  +H      WN++++G
Sbjct: 43  LKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLING 102

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            + N    +   +F +M   G   D+ +L++       +G+L+ GK+IH   +K G+   
Sbjct: 103 FVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLD 162

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF---EEAFDLL 265
             V V NSL+SMYS+CG      + F  M  ++V SWN I+ G+A +G     +E    +
Sbjct: 163 --VIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFV 220

Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLRE-GRSVHGYAIRRLL----GYDLLMMNSLM 320
            +MQ+   ++PD  TV +L++LC   +  R+ GR +HG+ +R  L    G ++ +   L+
Sbjct: 221 KDMQI-EGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLI 279

Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM-LYLCSQFS 367
           D YS+SN +     +F+ +   N + +W +MI+G            LF EM +    + +
Sbjct: 280 DMYSRSNRVDVGRRVFDRMECRN-VYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPN 338

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
             +L+++LP+C++   L   K IH + ++  F+N+    NAL+ MY  CG L  A  + +
Sbjct: 339 KVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFE 398

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
             S   D   W+ +I     +G  +EA+  +  M Q  N  PD +T+V V+SAC    L 
Sbjct: 399 FGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGN-KPDMITIVGVLSACSRAGLV 457

Query: 488 FEGKSLHGLAL-KSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMIS 545
            EG  ++  A+ K  +     +   ++ M GR   +  A    ++     +   W  ++S
Sbjct: 458 DEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVS 517

Query: 546 A-FSQNKAEVRALELFRHLEFEPNEIS 571
           A      +E++ L     ++ EP   S
Sbjct: 518 ASIIHGNSEMQDLAYRFLVQLEPENPS 544



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 17/188 (9%)

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISA 629
           L+  +Q H  +  LGF +N F+++ L+  Y+               + KS   W+S+I+ 
Sbjct: 43  LKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLING 102

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
           +  +    EA   F++MC  G+     ++ ++   C   G ++ G   +   L+   V  
Sbjct: 103 FVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLD 162

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
               +  ++ M  + G   E  +    +P +   G W  +LS  +  GD    K+V+  +
Sbjct: 163 VIVAN-SLMSMYSKCGGFGECLKLFDEMP-ERNVGSWNVILSGYADSGDRNFDKEVSGFV 220

Query: 750 FKLEPENV 757
             ++ E +
Sbjct: 221 KDMQIEGL 228


>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 558

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 275/526 (52%), Gaps = 36/526 (6%)

Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP- 341
            L+S+ + +  L   + VH   I      ++++ +SL + Y +SN L  A   F+ I   
Sbjct: 9   ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68

Query: 342 MNDLVSWNSMISG--------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
             +  SWN+++SG              L+  M   C       L+  + +C     LE G
Sbjct: 69  KRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128

Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
             IH   +K G   +     +L+ MY   G + +A  +   +    ++  W +++    +
Sbjct: 129 MLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVR-NSVLWGVLMKGYLK 187

Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDT 506
                E  + F  M +    + D++TL+ ++ ACGN+    EGK +HGL+++ S +    
Sbjct: 188 YSKDSEVFRLFYLM-RDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSG 246

Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
            ++ ++I MY +CR + +A  +FE+    N+  W  +IS F++ +  V A++LFR +  E
Sbjct: 247 YLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGE 306

Query: 567 ---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
              PN  ++ +IL +C+ LG LRHGK +HG++   G + ++   ++ +D Y+ C      
Sbjct: 307 SILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMA 366

Query: 618 --------KSNA-AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                   K N  +WSSMI+A+G +G   EA++ F  M +  + P   + +SLLSACSHS
Sbjct: 367 RKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHS 426

Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
           G V EG + + +M  +Y + PE EH+ C+VD+LGR+G++ EA  FI N+P++P    WGA
Sbjct: 427 GNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486

Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
           +LSAC  H +  +  ++AE L  +EP+    Y+ LSN+Y   G W+
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWE 532



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 257/551 (46%), Gaps = 37/551 (6%)

Query: 79  IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC-- 136
           ++S L+Q   L   + VH   I  G   +  L +   N Y +   L+ +  +F  + C  
Sbjct: 10  LLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWK 69

Query: 137 ADTVSWNTIMSGCLHNN--YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
            +  SWNTI+SG   +   Y    LL +  M    +  D+ +L  A+ A   LG L  G 
Sbjct: 70  RNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGM 129

Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
           +IH L +K G +   YV+   SL+ MY+Q G +E+A++ F  M  ++ V W  ++ G+  
Sbjct: 130 LIHGLAMKNGLDKDDYVA--PSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLK 187

Query: 255 NGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGY 311
             K  E F L +   LMR   +  D  T++ L+  C +    +EG+ VHG +IRR  +  
Sbjct: 188 YSKDSEVFRLFY---LMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQ 244

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
              +  S++D Y K   L  A  LF      N +V W ++ISG            LF++M
Sbjct: 245 SGYLEASIIDMYVKCRLLDNARKLFETSVERN-VVMWTTLISGFAKCERAVEAIDLFRQM 303

Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
           L      +  TL AIL SC+S  SL  GKS+H + ++ G   + +   + +  Y  CG++
Sbjct: 304 LGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNI 363

Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
             A  +   +   +  S W+ +I A   NG F+EA+  F +M + QN  P+SVT V+++S
Sbjct: 364 QMARKVFDMMPKRNVIS-WSSMINAFGINGLFEEALDCFDNM-KSQNLVPNSVTFVSLLS 421

Query: 480 ACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           AC +     EG K    +     +  +      ++ + GR  +I  A +  ++     + 
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMA 481

Query: 539 T-WNCMISAFSQNKAEVRALELF-RHLEFEPNEISIVSILSAC-------TQLGVLRHGK 589
           + W  ++SA   +K    A E+  + L  EP+E S+  +LS           +  +RH  
Sbjct: 482 SAWGALLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKM 541

Query: 590 QIHGHVFHLGF 600
            I G+   +G 
Sbjct: 542 GIKGYRKPMGL 552



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 224/504 (44%), Gaps = 23/504 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETC--NKDVVTWNAMITACVENRCVVMG-- 57
           GF   +   +SL  AY   +  + + A F       ++  +WN +++   +++       
Sbjct: 34  GFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYSKSKSCYYSDV 93

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  +  M       DS  L+  + A   +  L+ G ++H L++K G+  D  +    V M
Sbjct: 94  LLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKDDYVAPSLVEM 153

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           YA+ G + S++  F  M   ++V W  +M G L  +   +    F  M  +G   D ++L
Sbjct: 154 YAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLALDALTL 213

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGDIEAAERAFWG 236
              V A   +     GK +H L I+  + D S Y+    S+I MY +C  ++ A + F  
Sbjct: 214 ICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA--SIIDMYVKCRLLDNARKLFET 271

Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
              ++VV W  +I GFA   +  EA DL  +M L  S+ P+  T+  ++  C+    LR 
Sbjct: 272 SVERNVVMWTTLISGFAKCERAVEAIDLFRQM-LGESILPNHCTLAAILVSCSSLGSLRH 330

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM----- 351
           G+SVHGY IR  +  D +   S +D Y++  ++  A  +F+ + P  +++SW+SM     
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFD-MMPKRNVISWSSMINAFG 389

Query: 352 ISGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
           I+GLF+E L                T +++L +C+   +++ G K         G     
Sbjct: 390 INGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEE 449

Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMT 462
                ++ +    G++  A S +  +      S W  ++ AC  +     A +   K ++
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509

Query: 463 QQQNASPDSVTLVNVISACGNLEL 486
            + + S   V L N+ +  G  E+
Sbjct: 510 MEPDESSVYVLLSNIYADAGMWEM 533


>gi|255541594|ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549041|gb|EEF50530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 751

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 169/551 (30%), Positives = 279/551 (50%), Gaps = 50/551 (9%)

Query: 270 LMRSVEPDIATVVTLIS-----LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
           L+    P+  T+V++I       C D +      + HG+ I+     ++ +  +L+ FY+
Sbjct: 2   LLTDQRPNFVTLVSVIRGLGAFHCQDLI-----SAAHGFVIKLGFELEVPVRTALIRFYT 56

Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLL 372
             +     +L    +   ND+V W++M+S              F+ ML   ++ +  T++
Sbjct: 57  LFDFEISLKLFDQKLH--NDVVLWSAMVSACVKNAKYREGVQHFRRMLNYGTEANHVTVI 114

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
           +IL +C     L F K IH + LK  F + T+  N+LM  Y  CG + A+F +  RI   
Sbjct: 115 SILSACGHLGGLCFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEK 174

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  VI  C +N   +EA+  F  M +    + + +    ++++    EL F G  
Sbjct: 175 -DLISWRTVIRICVENECPREALDIFLKMQRSTTEADEIIIRDTIMASIQAKELKF-GLG 232

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
            H    K+       V  AL+ MYG+     SA  VF+     +L  W+ MIS +++   
Sbjct: 233 FHAYIEKNGFSGYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGK 292

Query: 553 EVRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              AL ++R ++    + NE++ VS+L AC+ LG    G+ IHG +   G   N+F++SA
Sbjct: 293 PYDALNIYRQMQSTNEKANEVTFVSLLQACSALGAQELGESIHGFITKAGHSSNAFLNSA 352

Query: 610 LLDMY---SNCKSNAA------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
           L+D+Y    + K   A            WSSMI+ Y  +G G EA+E F +M N G +P 
Sbjct: 353 LIDLYCKFGSVKKGKAVFDEISTKDLICWSSMINGYALNGCGSEALETFADMLNWGFKPN 412

Query: 655 KSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFI 714
           ++  +S+LS CS  GL  EG +++  M E+Y + P+  H+ C+VD+L R G ++EA  F+
Sbjct: 413 ETVFLSILSVCSQCGLEHEGRKWFYYMQEKYRLAPKLSHYACMVDLLSRHGHIEEALMFV 472

Query: 715 KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK----LEPENVGYYISLSNMYVAL 770
           K +P+ P   +WGA+L+ C   GD  +  +VAE + +    L+PEN  YY++L ++Y   
Sbjct: 473 KKMPVVPDKRIWGAVLAGCRSRGDGSI--EVAEFVVRQLSALDPENTSYYVTLLDLYAEQ 530

Query: 771 GRWKDAVEIGK 781
           GRWKD   + K
Sbjct: 531 GRWKDVERLTK 541



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 253/550 (46%), Gaps = 66/550 (12%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +P  T+L+  Y+    FE SL LF +  + DVV W+AM++ACV+N     G+  F
Sbjct: 40  GFELEVPVRTALIRFYTLFD-FEISLKLFDQKLHNDVVLWSAMVSACVKNAKYREGVQHF 98

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M+  G   +  T++ I+SA   +  L   + +H   +K    + + + N  ++ YAKC
Sbjct: 99  RRMLNYGTEANHVTVISILSACGHLGGLCFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKC 158

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G + +S   F+ +   D +SW T++  C+ N  P + L  F +M  S  +AD + +   +
Sbjct: 159 GKIEASFYIFNRICEKDLISWRTVIRICVENECPREALDIFLKMQRSTTEADEIIIRDTI 218

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            AS    EL +G   HA   K G+  S YVSV  +L+ MY +     +A   F  +  KD
Sbjct: 219 MASIQAKELKFGLGFHAYIEKNGF--SGYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKD 276

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           +++W+A+I  +A  GK  +A ++  +MQ       ++ T V+L+  C+       G S+H
Sbjct: 277 LIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEV-TFVSLLQACSALGAQELGESIH 335

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
           G+  +     +  + ++L+D Y K  S+ K + +F+ I+   DL+ W+SMI+G       
Sbjct: 336 GFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFDEIST-KDLICWSSMINGY------ 388

Query: 362 LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---- 417
                        L  C S E+LE    +  W    GF  N     +++ +   CG    
Sbjct: 389 ------------ALNGCGS-EALETFADMLNW----GFKPNETVFLSILSVCSQCGLEHE 431

Query: 418 ------DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
                  +   + L  ++SH      +  ++   +++GH +EA+   K M       PD 
Sbjct: 432 GRKWFYYMQEKYRLAPKLSH------YACMVDLLSRHGHIEEALMFVKKMP----VVPDK 481

Query: 472 VTLVNVISAC-----GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMY------GRCR 520
                V++ C     G++E+A          ++ L  LD    +  +T+       GR +
Sbjct: 482 RIWGAVLAGCRSRGDGSIEVA-------EFVVRQLSALDPENTSYYVTLLDLYAEQGRWK 534

Query: 521 DIKSASTVFE 530
           D++  + + +
Sbjct: 535 DVERLTKIVD 544



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 21/334 (6%)

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
           ML    + +F TL++++    +    +   + H + +KLGF        AL+  Y    D
Sbjct: 1   MLLTDQRPNFVTLVSVIRGLGAFHCQDLISAAHGFVIKLGFELEVPVRTALIRFY-TLFD 59

Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
              +  L  +  HN D   W+ ++ AC +N  ++E ++ F+ M        + VT+++++
Sbjct: 60  FEISLKLFDQKLHN-DVVLWSAMVSACVKNAKYREGVQHFRRML-NYGTEANHVTVISIL 117

Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
           SACG+L      K +HG  LK +    T VQN+L+  Y +C  I+++  +F      +L 
Sbjct: 118 SACGHLGGLCFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEKDLI 177

Query: 539 TWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
           +W  +I    +N+    AL++F  ++    E +EI I   + A  Q   L+ G   H ++
Sbjct: 178 SWRTVIRICVENECPREALDIFLKMQRSTTEADEIIIRDTIMASIQAKELKFGLGFHAYI 237

Query: 596 FHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAI 640
              GF     + +ALL MY                N K   AWS+MIS Y   GK ++A+
Sbjct: 238 EKNGFSGYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDAL 297

Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
            ++ +M ++  +  + + +SLL ACS  G  + G
Sbjct: 298 NIYRQMQSTNEKANEVTFVSLLQACSALGAQELG 331


>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/475 (33%), Positives = 238/475 (50%), Gaps = 56/475 (11%)

Query: 361 YLCSQFSFSTLLAILPSCN---SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           Y  S F F   LA+L S +   + +SL+  +  H   L LG S N++    L+  Y  C 
Sbjct: 13  YYASAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQ 72

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
               +  +   + H  +   WN +I    +N  + EA + F  M    +  PD  TL  +
Sbjct: 73  HPYHSRLVFDSLQHK-NVFLWNSLINGYAKNRLYNEAFQLFNQMCSS-DVLPDDFTLSTL 130

Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES------ 531
                 L   F GKS+HG +++     DT V N++++MY +C + + +  VF+       
Sbjct: 131 SKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNS 190

Query: 532 -CYNC------------------------NLCTWNCMISAFSQNKAEVRALELFRHLE-- 564
             +N                         N+ +W  MI+ + +N     AL LFR ++  
Sbjct: 191 GSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVI 250

Query: 565 --FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----- 617
              EPN +S+VS+L AC+    L  G+QIHG            + +AL+DMYS C     
Sbjct: 251 DGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDS 310

Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
                      K   +WSSMIS YG HGKG EAI L+ +M  +GIRP   + + +LSACS
Sbjct: 311 ARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACS 370

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
            SGLV+EGL  Y++++ +Y + P  E   CIVDMLGR+G+L  A +FIK +P++P P VW
Sbjct: 371 RSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVW 430

Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           GA++S    HGD +M +     L +LEPEN   Y+S+SN+Y +  RW    E+ +
Sbjct: 431 GALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRR 485



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 190/425 (44%), Gaps = 46/425 (10%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK  R  H   +  G+  +S L    +  YA C     S   F  +   +   WN++++G
Sbjct: 39  LKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLING 98

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    +    F +M  S    D+ +LS+    S+ LG L  GK IH   I++G+   
Sbjct: 99  YAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSD 158

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAF----------WG---------------------M 237
             V+  NS++SMY +CG+ E + + F          W                      M
Sbjct: 159 TVVA--NSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRM 216

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
            C++V SW A+I+G+  NG  +EA  L  +MQ++  +EP+  ++V+++  C+    L  G
Sbjct: 217 KCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSG 276

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
           R +HG+A+R+ L  ++ + N+L+D YSK  SL  A  +F   +   D +SW+SMISG   
Sbjct: 277 RQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGL 336

Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
                    L+ +ML    +    T + IL +C+    +  G +I+   +       T+ 
Sbjct: 337 HGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLE 396

Query: 406 VNA-LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
           + A ++ M    G L  A   ++ +      S W  ++     +G  +     ++ + Q 
Sbjct: 397 IFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQL 456

Query: 465 QNASP 469
           +  +P
Sbjct: 457 EPENP 461



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 37/378 (9%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +T L+ AY+   +   S  +F    +K+V  WN++I    +NR        F +M    +
Sbjct: 61  ATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDV 120

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
             D  TL  +    +++  L  G+ +H  SI+ G ++D+ + N  ++MY KCG+   S  
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRK 180

Query: 130 TF-------SG------------------------MHCADTVSWNTIMSGCLHNNYPEKC 158
            F       SG                        M C +  SW  +++G + N   ++ 
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEA 240

Query: 159 LLYFREMG-WSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSL 217
           L  FR+M    G + + VSL S + A +    L  G+ IH   ++   E +  VS+ N+L
Sbjct: 241 LSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR--KELNNEVSLCNAL 298

Query: 218 ISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
           I MYS+CG +++A R F   + CKD +SW+++I G+ L+GK +EA  LL++  L   + P
Sbjct: 299 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAI-LLYDKMLQAGIRP 357

Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELL 335
           D+ T V ++S C+ S L+ EG +++   I    +   L +   ++D   ++  L  A   
Sbjct: 358 DMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDF 417

Query: 336 FNAIAPMNDLVSWNSMIS 353
             A+        W +++S
Sbjct: 418 IKAMPVEPGPSVWGALVS 435



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 176/391 (45%), Gaps = 59/391 (15%)

Query: 275 EPDIATVVTL-ISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
           +P +A + +L  S+   SL L   R  H   +   L  + L+   L+  Y+       + 
Sbjct: 21  DPSLALLQSLHFSVTHKSLKLT--RQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSR 78

Query: 334 LLFNAIAPMNDLVSWNSMISGLFKEMLY---------LCS------QFSFSTLLAILPSC 378
           L+F+++   N  + WNS+I+G  K  LY         +CS       F+ STL  +    
Sbjct: 79  LVFDSLQHKNVFL-WNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSEL 137

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
            +   L  GKSIH   +++GF ++T+  N++M MY  CG+   +  +   ++  +  S W
Sbjct: 138 GA---LFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGS-W 193

Query: 439 NIVIVAC-------------------------------TQNGHFQEAIKTFKSMTQQQNA 467
           N++I                                   +NG   EA+  F+ M      
Sbjct: 194 NVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGI 253

Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
            P+ V+LV+V+ AC +      G+ +HG A++  +  +  + NALI MY +C  + SA  
Sbjct: 254 EPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARR 313

Query: 528 VFESCYNC-NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLG 583
           VFE    C +  +W+ MIS +  +     A+ L+  +      P+ I+ V ILSAC++ G
Sbjct: 314 VFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSG 373

Query: 584 VLRHGKQIHGHVFH-LGFQENSFISSALLDM 613
           ++  G  I+  V +  G +    I + ++DM
Sbjct: 374 LVNEGLNIYSSVINDYGIEPTLEIFACIVDM 404



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 45/297 (15%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWN------------------- 42
           GF++    + S+++ Y     FE S  +F E   ++  +WN                   
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVF 213

Query: 43  ------------AMITACVENRCVVMGLHFFGEM-VEEGIRFDSTTLLIIVSALTQMNCL 89
                       AMI   VEN      L  F +M V +GI  +  +L+ ++ A +  + L
Sbjct: 214 DRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGL 273

Query: 90  KQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH-CADTVSWNTIMSG 148
             GR +H  +++  +  + SLCN  ++MY+KCG L+S+   F     C D +SW++++SG
Sbjct: 274 LSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISG 333

Query: 149 C-LHNNYPEKCLLYFR--EMGWSGEQADNVSLSSAVAASACLGE--LSYGKVIHALGIKL 203
             LH    E  LLY +  + G   +    V + SA + S  + E    Y  VI+  GI+ 
Sbjct: 334 YGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIE- 392

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS-WNAIIDGFALNGKFE 259
                P + +   ++ M  + G ++ A      M  +   S W A++    ++G  E
Sbjct: 393 -----PTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLE 444


>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 180/635 (28%), Positives = 315/635 (49%), Gaps = 82/635 (12%)

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
           TN  IS Y++   ++ A + F  M  + VVSWN +I  ++ +G+F EA  L++ M   RS
Sbjct: 35  TNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMH--RS 92

Query: 274 -VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
            ++   +T  +++S+CA    LR+G+ +H   ++       L+ ++L+ FY+    + +A
Sbjct: 93  HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 152

Query: 333 ELLFNAIA------------------------------PMNDLVSWNSMISGLFK----- 357
             +F+ +                               P  D+V+W ++ISG  K     
Sbjct: 153 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 212

Query: 358 ----EMLYLC--------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
               E+  L         ++F+F     ++ +C     L  G+++H   +K G   +   
Sbjct: 213 GKALEIFRLMMRSGETTPNEFTFD---CVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 269

Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
             AL+  Y  C  +  A  + + +  N   +  N +I      G  ++A   F  MT+  
Sbjct: 270 GGALVEFYCECEAIDDALRVCKGVV-NPCLNALNSLIEGLISMGRIEDAELVFNGMTEM- 327

Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
             +P S  L+    A G  ++    +    +  +++        N +I++Y R  +I  A
Sbjct: 328 --NPVSYNLMIKGYAVGG-QMDDSKRLFEKMPCRTIFS-----SNTMISVYSRNGEIDKA 379

Query: 526 STVFESCYN-CNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQ 581
             +FE   N  +  TWN MIS +  +     AL+L+     L  +  + +  ++  AC+ 
Sbjct: 380 LELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSC 439

Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---------------NAAWSSM 626
           LG L  G+ +H H+    F+ N ++ ++L+DMYS C S                AAW+++
Sbjct: 440 LGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTAL 499

Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
           I+ + YHG G EAI LF  M   G+ P  ++ + +LSACS +GLV+EG++ +++M   Y 
Sbjct: 500 INGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYS 559

Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
           V P  EH+ C+VD+LGRSG ++EA EFIK +P++    VWGA+LSAC    D ++G++VA
Sbjct: 560 VTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVA 619

Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
           E +F  +P+ +  Y+ LSN+Y  LGRW++ + + K
Sbjct: 620 EKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRK 654



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 155/636 (24%), Positives = 263/636 (41%), Gaps = 89/636 (13%)

Query: 4   LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
           L+ + ++   ++ Y+  S  + +  LF +   + VV+WN MI++  ++      L     
Sbjct: 29  LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 88

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M    ++   +T   ++S   ++ CL+ G+++HCL +K+G  +   + +  +  YA C +
Sbjct: 89  MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFE 148

Query: 124 LNSSE-------------------------------CTFSGMHCADTVSWNTIMSGCLHN 152
           +  +                                  F  M   D V+W T++SG   N
Sbjct: 149 IGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKN 208

Query: 153 -NYPEKCLLYFREMGWSGEQADN-VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
            +   K L  FR M  SGE   N  +    V A   LG LS G+ +H L +K G E  P 
Sbjct: 209 GDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDP- 267

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
            S+  +L+  Y +C  I+ A R   G+    + + N++I+G    G+ E+A  + + M  
Sbjct: 268 -SIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTE 326

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI-------RRLLG----YDLLMMNSL 319
           M  V  ++                     + GYA+       +RL        +   N++
Sbjct: 327 MNPVSYNLM--------------------IKGYAVGGQMDDSKRLFEKMPCRTIFSSNTM 366

Query: 320 MDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFS 367
           +  YS++  + KA  LF       D V+WNSMISG            L+  M  L  Q +
Sbjct: 367 ISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQT 426

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
            ST  A+  +C+   SL  G+ +H   +K  F +N     +L+ MY  CG ++ A +   
Sbjct: 427 QSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFV 486

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
            I  + + + W  +I     +G   EAI  F  M  +Q  +P+  T V V+SAC    L 
Sbjct: 487 SI-FSPNVAAWTALINGHAYHGLGSEAISLFDRMI-EQGLAPNGATFVGVLSACSRAGLV 544

Query: 488 FEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMIS 545
            EG K  H +     +         ++ + GR   I+ A    +      +   W  ++S
Sbjct: 545 NEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLS 604

Query: 546 A----FSQNKAEVRALELFRHLEFEPNEISIVSILS 577
           A          E  A ++F    F+P  IS   ILS
Sbjct: 605 ACWFWMDLEVGERVAEKMF---SFDPKPISSYVILS 637



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 2/149 (1%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F +++   TSL+  YS       +   F    + +V  W A+I     +      +  F 
Sbjct: 458 FESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFD 517

Query: 63  EMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M+E+G+  +  T + ++SA ++   + +G ++ H +     +          V++  + 
Sbjct: 518 RMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRS 577

Query: 122 GDLNSSECTFSGMHC-ADTVSWNTIMSGC 149
           G +  +E     M   AD V W  ++S C
Sbjct: 578 GHIREAEEFIKKMPLEADGVVWGALLSAC 606


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 260/477 (54%), Gaps = 27/477 (5%)

Query: 326 SNSLSKAELLFNAIAPMNDL-VSWN--SMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           SN L   E  FN +  +  L  +WN  S+    +  M +L  + +  T   +  +C++  
Sbjct: 84  SNILDPTEYSFNVM--IRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLL 141

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           ++E G+  HC  ++ G   +    ++L+ MY  CG +  A  +   IS   D   WN +I
Sbjct: 142 AVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK-DLVSWNSMI 200

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
              ++  H  EA+  F+ M +     P+ ++LV+V+ ACG L     G  +    +++ M
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEA-GFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            L+  + +ALI MYG+C D+ SA  +F+S    +  TWN MI+ ++QN     A++LF+ 
Sbjct: 260 TLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQD 319

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +      P++I+++ ILSAC  +G L  GKQ+  +    GFQ++ ++ +AL+DMY+ C  
Sbjct: 320 MRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGS 379

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG--IRPTKSSVISLL 662
                        K+  +W++MISA  +HG+  EA+ LF  M N G  + P   + + +L
Sbjct: 380 LDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVL 439

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC H+GLVDEG + ++ M   + + P+ EH+ C+VD+  R+G L+EA++F+  +P +P 
Sbjct: 440 SACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPD 499

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             + GA+L AC    +  + ++V +LL +LEP N G Y+  S +Y  L RW D+  +
Sbjct: 500 EVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARM 556



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 231/492 (46%), Gaps = 58/492 (11%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLHFFGE 63
           H P S   L   +++  F  +   F    +    ++N MI   +   N+   + L F+  
Sbjct: 61  HKPNS--FLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSS-LALEFYSR 117

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   G++ ++ T   +  A + +  ++ GR+ HC  I+ G+  D  + +  + MYA+CG 
Sbjct: 118 MKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK 177

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +  +   F  +   D VSWN+++SG     +  + +  FREM  +G Q + +SL S + A
Sbjct: 178 MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGA 237

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              LG+L  G  +    ++     + ++   ++LI MY +CGD+ +A R F  M  KD V
Sbjct: 238 CGELGDLKLGTWVEEFVVENKMTLNYFMG--SALIHMYGKCGDLVSARRIFDSMKKKDKV 295

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WNA+I G+A NG  EEA  L  +M+ M S  PD  T++ ++S CA    L  G+ V  Y
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMR-MSSTAPDQITLIGILSACASIGALDLGKQVEIY 354

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
           A  R    D+ +  +L+D Y+K  SL  A  +F  + P  + VSWN+MIS          
Sbjct: 355 ASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM-PKKNEVSWNAMISALAFHGQAQE 413

Query: 354 --GLFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
              LFK M+      S +  T + +L +C           +H   +  G          L
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSAC-----------VHAGLVDEG--------RRL 454

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            HM      + ++F L+ +I H      ++ ++   ++ GH +EA     +M ++    P
Sbjct: 455 FHM------MSSSFGLVPKIEH------YSCMVDLFSRAGHLEEAWDFVMTMPEK----P 498

Query: 470 DSVTLVNVISAC 481
           D V L  ++ AC
Sbjct: 499 DEVILGALLGAC 510



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       S SL+T Y+       +  +F E   KD+V+WN+MI+   + R     +  
Sbjct: 156 RGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGL 215

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+E G + +  +L+ ++ A  ++  LK G  V    ++  M  +  + +  ++MY K
Sbjct: 216 FREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGK 275

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGDL S+   F  M   D V+WN +++G   N   E+ +  F++M  S    D ++L   
Sbjct: 276 CGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGI 335

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A +G L  GK +     + G++D  YV    +L+ MY++CG ++ A R F+GM  K
Sbjct: 336 LSACASIGALDLGKQVEIYASERGFQDDVYVGT--ALVDMYAKCGSLDNAFRVFYGMPKK 393

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHE-MQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + VSWNA+I   A +G+ +EA  L    M    +V P+  T V ++S C  + L+ EGR 
Sbjct: 394 NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRR 453

Query: 300 V 300
           +
Sbjct: 454 L 454



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +   T+L+  Y+     +++  +FY    K+ V+WNAMI+A   +      L  
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALAL 417

Query: 61  FGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNM 117
           F  M+ EG  +  +  T + ++SA      + +G R+ H +S   G++      +  V++
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477

Query: 118 YAKCGDLNSS 127
           +++ G L  +
Sbjct: 478 FSRAGHLEEA 487


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 177/625 (28%), Positives = 317/625 (50%), Gaps = 50/625 (8%)

Query: 178 SSAVAASACLGELSY-GKVIHALGIKLGYEDSPYVS--VTNSLISMYSQCGDIEAAERAF 234
           SS + ++  L ELS  G+V  A  +   ++  PY      N +IS Y+  G++  A + F
Sbjct: 35  SSNLDSNQLLSELSKNGRVDEARKL---FDQMPYRDKYTWNIMISAYANLGNLVEARKLF 91

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
                 + ++W++++ G+  NG   E      +M      +P   T+ +++  C+   LL
Sbjct: 92  NETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM-WSDGQKPSQYTLGSVLRACSTLSLL 150

Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
             G+ +H YAI+  L  ++ +   L+D YSK   L +AE LF ++    + V W +M++G
Sbjct: 151 HTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTG 210

Query: 355 L------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
                        FKEM     + +  T  +IL +C S  +  FG+ +H   +  GF  N
Sbjct: 211 YAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPN 270

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
               +AL+ MY  CGDL +A  +L  +  + D  CWN +IV C  +G+ +EA+  F  M 
Sbjct: 271 VYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYMEEALVLFHKM- 328

Query: 463 QQQNASPDSVTLVNVI---SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
             ++   D  T  +V+   ++C NL++   G+S+H L +K+       V NAL+ MY + 
Sbjct: 329 HNRDIRIDDFTYPSVLKSLASCKNLKI---GESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSIL 576
            ++  A  VF    + ++ +W  +++ +  N    +AL+LF   R    + ++  +  + 
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKG 636
           SAC +L V+  G+Q+H           +FI S+   + S      A +S+I+ Y   G  
Sbjct: 446 SACAELTVIEFGRQVHA----------NFIKSSAGSLLS------AENSLITMYAKCGCL 489

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            +AI +   M    +     S  +++   + +GLV+ G  Y+ +M + Y ++P ++ + C
Sbjct: 490 EDAIRVXDSMETRNV----ISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYAC 545

Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
           ++D+LGR+GK+ EA   +  + ++P   +W ++LSAC  HG+ ++G++  + L KLEP N
Sbjct: 546 MIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSN 605

Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
              Y+ LSNM+   GRW+DA  I +
Sbjct: 606 SLPYVLLSNMFSVAGRWEDAAHIRR 630



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 238/493 (48%), Gaps = 25/493 (5%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           +++AY+N+     +  LF ET   + +TW+++++   +N C V GL  F +M  +G +  
Sbjct: 74  MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             TL  ++ A + ++ L  G+++HC +IK  + A+  +    V+MY+KC  L  +E  F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 133 GM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            +    + V W  +++G   N    K +  F+EM   G ++++ +  S + A   +   +
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
           +G+ +H   I  G+   P V V ++L+ MY++CGD+ +A      M   DVV WN++I G
Sbjct: 254 FGRQVHGCIIWSGF--GPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
              +G  EEA  L H+M   R +  D  T  +++   A    L+ G SVH   I+   G+
Sbjct: 312 CVTHGYMEEALVLFHKMH-NRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIK--TGF 368

Query: 312 DL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
           D    + N+L+D Y+K  +LS A  +FN I    D++SW S+++G            LF 
Sbjct: 369 DACKTVSNALVDMYAKQGNLSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFC 427

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
           +M           +  +  +C     +EFG+ +H   +K    +     N+L+ MY  CG
Sbjct: 428 DMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCG 487

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS---VTL 474
            L  A  +   +   +  S W  +IV   QNG  +     F+SM +     P S     +
Sbjct: 488 CLEDAIRVXDSMETRNVIS-WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACM 546

Query: 475 VNVISACGNLELA 487
           ++++   G +  A
Sbjct: 547 IDLLGRAGKINEA 559



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 171/665 (25%), Positives = 299/665 (44%), Gaps = 86/665 (12%)

Query: 90  KQGRVVHCLSIKAGM-IADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           K GRV     +   M   D    N+ ++ YA  G+L  +   F+     ++++W++++SG
Sbjct: 49  KNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSG 108

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
              N    + L  F +M   G++    +L S + A + L  L  GK+IH   IK+  E +
Sbjct: 109 YCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEAN 168

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
            +V+    L+ MYS+C  +  AE  F+ +   K+ V W A++ G+A NG+  +A     E
Sbjct: 169 IFVAT--GLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKE 226

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
           M+  + +E +  T  ++++ C        GR VHG  I    G ++ + ++L+D Y+K  
Sbjct: 227 MR-NQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCG 285

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYL----------CSQFSFSTLL 372
            L+ A ++ + +  ++D+V WNSMI      G  +E L L             F++ ++L
Sbjct: 286 DLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVL 344

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
             L SC   ++L+ G+S+H   +K GF       NAL+ MY   G+L  A  +  +I  +
Sbjct: 345 KSLASC---KNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL-D 400

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
            D   W  ++     NG  ++A++ F  M +      D   +  V SAC  L +   G+ 
Sbjct: 401 KDVISWTSLVTGYVHNGFHEKALQLFCDM-RTARVDLDQFVVACVFSACAELTVIEFGRQ 459

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +H   +KS  G     +N+LITMY +C  ++ A  V +S    N+ +W  +I  ++QN  
Sbjct: 460 VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN-- 517

Query: 553 EVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
                                         G++  G+              S+  S +  
Sbjct: 518 ------------------------------GLVETGQ--------------SYFES-MEK 532

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
           +Y    ++  ++ MI   G  GK  EA  L + M    + P  +   SLLSAC   G ++
Sbjct: 533 VYGIKPASDRYACMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLE 589

Query: 673 EGLQYYNNM--LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEF---IKNLPIQPKPGV-W 726
            G +   N+  LE  +  P    +V + +M   +G+ ++A      +K + I  +PG  W
Sbjct: 590 LGERAGKNLIKLEPSNSLP----YVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSW 645

Query: 727 GAMLS 731
             M S
Sbjct: 646 IEMKS 650



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 228/485 (47%), Gaps = 28/485 (5%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGE 63
           A++  +T L+  YS       +  LF+   + K+ V W AM+T   +N   +  +  F E
Sbjct: 167 ANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKE 226

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M  +G+  +  T   I++A T ++    GR VH   I +G   +  + +  V+MYAKCGD
Sbjct: 227 MRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGD 286

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           L S+      M   D V WN+++ GC+ + Y E+ L+ F +M     + D+ +  S + +
Sbjct: 287 LASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKS 346

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
            A    L  G+ +H+L IK G++     +V+N+L+ MY++ G++  A   F  +  KDV+
Sbjct: 347 LASCKNLKIGESVHSLTIKTGFDACK--TVSNALVDMYAKQGNLSCALDVFNKILDKDVI 404

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           SW +++ G+  NG  E+A  L  +M+  R V+ D   V  + S CA+  ++  GR VH  
Sbjct: 405 SWTSLVTGYVHNGFHEKALQLFCDMRTAR-VDLDQFVVACVFSACAELTVIEFGRQVHAN 463

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLC 363
            I+   G  L   NSL+  Y+K   L  A  + +++   N ++SW ++I G  +  L   
Sbjct: 464 FIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRN-VISWTAIIVGYAQNGLVET 522

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            Q  F ++  +                       G    +     ++ +    G +  A 
Sbjct: 523 GQSYFESMEKV----------------------YGIKPASDRYACMIDLLGRAGKINEAE 560

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACG 482
            LL R+    D + W  ++ AC  +G+ +   +  K++ + + + S   V L N+ S  G
Sbjct: 561 HLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAG 620

Query: 483 NLELA 487
             E A
Sbjct: 621 RWEDA 625



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 2/286 (0%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  ++   ++L+  Y+      S+  +       DVV WN+MI  CV +  +   L  F
Sbjct: 266 GFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLF 325

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            +M    IR D  T   ++ +L     LK G  VH L+IK G  A  ++ N  V+MYAK 
Sbjct: 326 HKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G+L+ +   F+ +   D +SW ++++G +HN + EK L  F +M  +    D   ++   
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
           +A A L  + +G+ +HA  IK        +S  NSLI+MY++CG +E A R    M  ++
Sbjct: 446 SACAELTVIEFGRQVHANFIK--SSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRN 503

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL 287
           V+SW AII G+A NG  E        M+ +  ++P       +I L
Sbjct: 504 VISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMIDL 549


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 185/611 (30%), Positives = 302/611 (49%), Gaps = 47/611 (7%)

Query: 210 YVSVTNSLISMYSQC--GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
           ++ V N+++  YS+C  GD+  A + F  M  KD V+WN +I G+  +G    A++ L  
Sbjct: 33  HIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKS 92

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSK 325
           M+  R  + D  T  +++   A +     G+ VH   ++  +GY+  +   ++L+D Y+K
Sbjct: 93  MK-RRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVK--IGYEQSVYAGSALLDMYAK 149

Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLYLCSQF--------SFST 370
              +  A  +F  + P+ + VSWN++I G  +         L  C Q         +F+ 
Sbjct: 150 CERVEDAYDVFQGM-PVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAP 208

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS 430
           LL +L   +  +  +    +HC  +K G        NA +  Y  CG L  A  +     
Sbjct: 209 LLTLL---DGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAV 265

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
              D   WN ++VA   +   ++A   F  M Q     PD  T   VISAC        G
Sbjct: 266 GTRDLVTWNSMLVAYLVHDKDEDAFNLFLEM-QGFGFEPDIYTYTCVISACFAAAHKNYG 324

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRC--RDIKSASTVFESCYNCNLCTWNCMISAFS 548
           KS H L +K  +     + NALITMY +   + +++A  +F S  + +  +WN +++ FS
Sbjct: 325 KSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFS 384

Query: 549 QNKAEVRALELFRHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           Q      AL+LF H+     EI   +  ++L +C+ L +L+ G+QIH      GF  N F
Sbjct: 385 QMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDF 444

Query: 606 ISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           ++S+L+ MYS C               +S+  W+S++ AY  HG+G  A++LF  M    
Sbjct: 445 VASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMRERE 504

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++    + +++L+ACSH GLV++G     +M  +Y + P  EH+ C VD+ GR+G L+EA
Sbjct: 505 VKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEA 564

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
              I ++P QP   V   +L AC   G+ ++  QVA  L ++EPE    Y+ LSNMY  L
Sbjct: 565 KALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHL 624

Query: 771 GRWKDAVEIGK 781
            RW D   + +
Sbjct: 625 KRWDDKASVTR 635



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 179/657 (27%), Positives = 307/657 (46%), Gaps = 55/657 (8%)

Query: 94  VVHCLSIKAGMIADSSLCNVFVNMYAKC--GDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
           + HC + K+G+I+   + N  +  Y+KC  GDLN +   F  M   DTV+WNT+++G + 
Sbjct: 20  LTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVE 79

Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAV--AASACLGELSYGKVIHALGIKLGYEDSP 209
           +        + + M   G QAD  +  S +   A AC  +L  G+ +H+L +K+GYE S 
Sbjct: 80  SGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDL--GQQVHSLIVKIGYEQSV 137

Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
           Y    ++L+ MY++C  +E A   F GM  ++ VSWNA+IDGF   G  + AF LL  MQ
Sbjct: 138 YAG--SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQ 195

Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
               V  +  T   L++L       +    +H   I+  L +   + N+ +  YS+   L
Sbjct: 196 -KEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLL 254

Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPS 377
             A+ +F+      DLV+WNSM+              LF EM     +    T   ++ +
Sbjct: 255 EDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISA 314

Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY--INCGDLVAAFSLLQRISHNSDT 435
           C +     +GKS H   +K G   +    NAL+ MY  +N   + AA +L   +  + D 
Sbjct: 315 CFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMK-SKDR 373

Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHG 495
             WN ++   +Q G  ++A+K F  M +      D      V+ +C +L +   G+ +H 
Sbjct: 374 VSWNSILTGFSQMGFSEDALKLFGHM-RSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHL 432

Query: 496 LALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVR 555
           L +K+    +  V ++LI MY +C  I+ A   FE     +  TWN ++ A++Q+     
Sbjct: 433 LTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDV 492

Query: 556 ALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
           AL+LF   R  E + + ++ V++L+AC+ +G++  G+ +      L   E+ +     ++
Sbjct: 493 ALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCV------LKSMESDYGIPPRME 546

Query: 613 MYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVD 672
            Y         +  +  +G  G   EA  L   M     +P    + +LL AC   G ++
Sbjct: 547 HY---------ACAVDLFGRAGYLEEAKALIDSM---PFQPNAMVLKTLLGACRACGNIE 594

Query: 673 EGLQYYNNMLEEYDVRPETEH--HVCIVDMLGRSGKLQE---AYEFIKNLPIQPKPG 724
              Q  + +LE   V PE EH  +V + +M G   +  +       ++   ++  PG
Sbjct: 595 LAAQVASQLLE---VEPE-EHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPG 647



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 161/621 (25%), Positives = 285/621 (45%), Gaps = 57/621 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLA--LFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           G ++H+  + ++L  YS     + +LA  LF E  +KD VTWN MIT  VE+  +     
Sbjct: 29  GIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWE 88

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
           F   M   G + D  T   I+  +        G+ VH L +K G        +  ++MYA
Sbjct: 89  FLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYA 148

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           KC  +  +   F GM   + VSWN ++ G +     +        M   G + ++ + + 
Sbjct: 149 KCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAP 208

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG-MT 238
            +              +H   IK G E   Y ++ N+ ++ YS+CG +E A+R F G + 
Sbjct: 209 LLTLLDGDKFYKLTMQLHCKIIKHGLE--FYNALCNATLTAYSECGLLEDAKRVFDGAVG 266

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D+V+WN+++  + ++ K E+AF+L  EMQ     EPDI T   +IS C  +     G+
Sbjct: 267 TRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGF-GFEPDIYTYTCVISACFAAAHKNYGK 325

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSN--SLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           S H   I+R L   + + N+L+  Y K N  S+  A  LF+++    D VSWNS+++G  
Sbjct: 326 SFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKS-KDRVSWNSILTGFS 384

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF  M     +       A+L SC+    L+ G+ IH   +K GF +N  
Sbjct: 385 QMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDF 444

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             ++L+ MY  CG +  A+   +  +  S  + WN ++ A  Q+G    A+  F S+ ++
Sbjct: 445 VASSLIFMYSKCGIIEDAWKCFEDTTKESSIT-WNSIMFAYAQHGQGDVALDLF-SIMRE 502

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           +    D VT V V++AC ++ L  +G+ +   +++S  G+  R+++    + ++GR   +
Sbjct: 503 REVKLDHVTFVAVLTACSHVGLVEQGRCVLK-SMESDYGIPPRMEHYACAVDLFGRAGYL 561

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
           + A  + +S                               + F+PN + + ++L AC   
Sbjct: 562 EEAKALIDS-------------------------------MPFQPNAMVLKTLLGACRAC 590

Query: 583 GVLRHGKQIHGHVFHLGFQEN 603
           G +    Q+   +  +  +E+
Sbjct: 591 GNIELAAQVASQLLEVEPEEH 611



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/233 (21%), Positives = 105/233 (45%), Gaps = 3/233 (1%)

Query: 1   RGFLAHLPTSTSLLTAYS--NVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGL 58
           RG    +    +L+T Y   N    E++L LF+   +KD V+WN+++T   +       L
Sbjct: 334 RGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDAL 393

Query: 59  HFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
             FG M       D      ++ + + +  L+ G+ +H L++K G  ++  + +  + MY
Sbjct: 394 KLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMY 453

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
           +KCG +  +   F       +++WN+IM     +   +  L  F  M     + D+V+  
Sbjct: 454 SKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFV 513

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
           + + A + +G +  G+ +    ++  Y   P +      + ++ + G +E A+
Sbjct: 514 AVLTACSHVGLVEQGRCVLK-SMESDYGIPPRMEHYACAVDLFGRAGYLEEAK 565


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 152/477 (31%), Positives = 260/477 (54%), Gaps = 27/477 (5%)

Query: 326 SNSLSKAELLFNAIAPMNDL-VSWN--SMISGLFKEMLYLCSQFSFSTLLAILPSCNSPE 382
           SN L   E  FN +  +  L  +WN  S+    +  M +L  + +  T   +  +C++  
Sbjct: 84  SNILDPTEYSFNVM--IRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLL 141

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
           ++E G+  HC  ++ G   +    ++L+ MY  CG +  A  +   IS   D   WN +I
Sbjct: 142 AVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK-DLVSWNSMI 200

Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
              ++  H  EA+  F+ M +     P+ ++LV+V+ ACG L     G  +    +++ M
Sbjct: 201 SGYSKMRHAGEAVGLFREMMEA-GFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKM 259

Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
            L+  + +ALI MYG+C D+ SA  +F+S    +  TWN MI+ ++QN     A++LF+ 
Sbjct: 260 TLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQD 319

Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-- 617
           +      P++I+++ ILSAC  +G L  GKQ+  +    GFQ++ ++ +AL+DMY+ C  
Sbjct: 320 MRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGS 379

Query: 618 -------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG--IRPTKSSVISLL 662
                        K+  +W++MISA  +HG+  EA+ LF  M N G  + P   + + +L
Sbjct: 380 LDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVL 439

Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
           SAC H+GLVDEG + ++ M   + + P+ EH+ C+VD+  R+G L+EA++F+  +P +P 
Sbjct: 440 SACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPD 499

Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             + GA+L AC    +  + ++V +LL +LEP N G Y+  S +Y  L RW D+  +
Sbjct: 500 EVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARM 556



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 231/492 (46%), Gaps = 58/492 (11%)

Query: 6   HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLHFFGE 63
           H P S   L   +++  F  +   F    +    ++N MI   +   N+   + L F+  
Sbjct: 61  HKPNS--FLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSS-LALEFYSR 117

Query: 64  MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
           M   G++ ++ T   +  A + +  ++ GR+ HC  I+ G+  D  + +  + MYA+CG 
Sbjct: 118 MKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGK 177

Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
           +  +   F  +   D VSWN+++SG     +  + +  FREM  +G Q + +SL S + A
Sbjct: 178 MGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGA 237

Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
              LG+L  G  +    ++     + ++   ++LI MY +CGD+ +A R F  M  KD V
Sbjct: 238 CGELGDLKLGTWVEEFVVENKMTLNYFMG--SALIHMYGKCGDLVSARRIFDSMKKKDKV 295

Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
           +WNA+I G+A NG  EEA  L  +M+ M S  PD  T++ ++S CA    L  G+ V  Y
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMR-MSSTAPDQITLIGILSACASIGALDLGKQVEIY 354

Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
           A  R    D+ +  +L+D Y+K  SL  A  +F  + P  + VSWN+MIS          
Sbjct: 355 ASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM-PNKNEVSWNAMISALAFHGQAQE 413

Query: 354 --GLFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
              LFK M+      S +  T + +L +C           +H   +  G          L
Sbjct: 414 ALALFKSMMNEGGTVSPNDITFVGVLSAC-----------VHAGLVDEG--------RRL 454

Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
            HM      + ++F L+ +I H      ++ ++   ++ GH +EA     +M ++    P
Sbjct: 455 FHM------MSSSFGLVPKIEH------YSCMVDLFSRAGHLEEAWDFVMTMPEK----P 498

Query: 470 DSVTLVNVISAC 481
           D V L  ++ AC
Sbjct: 499 DEVILGALLGAC 510



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 157/301 (52%), Gaps = 3/301 (0%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG       S SL+T Y+       +  +F E   KD+V+WN+MI+   + R     +  
Sbjct: 156 RGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGL 215

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
           F EM+E G + +  +L+ ++ A  ++  LK G  V    ++  M  +  + +  ++MY K
Sbjct: 216 FREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGK 275

Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
           CGDL S+   F  M   D V+WN +++G   N   E+ +  F++M  S    D ++L   
Sbjct: 276 CGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGI 335

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           ++A A +G L  GK +     + G++D  YV    +L+ MY++CG ++ A R F+GM  K
Sbjct: 336 LSACASIGALDLGKQVEIYASERGFQDDVYVGT--ALVDMYAKCGSLDNAFRVFYGMPNK 393

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHE-MQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
           + VSWNA+I   A +G+ +EA  L    M    +V P+  T V ++S C  + L+ EGR 
Sbjct: 394 NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRR 453

Query: 300 V 300
           +
Sbjct: 454 L 454



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RGF   +   T+L+  Y+     +++  +FY   NK+ V+WNAMI+A   +      L  
Sbjct: 358 RGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALAL 417

Query: 61  FGEMVEEG--IRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNM 117
           F  M+ EG  +  +  T + ++SA      + +G R+ H +S   G++      +  V++
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477

Query: 118 YAKCGDLNSS 127
           +++ G L  +
Sbjct: 478 FSRAGHLEEA 487


>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 764

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 191/628 (30%), Positives = 312/628 (49%), Gaps = 53/628 (8%)

Query: 196 IHALGIKLGY---EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           +HA+ +  G     +SPY +  N+LISMY +CG +E A + F  M  ++VVS+NA+   +
Sbjct: 29  LHAIILTAGAGSASESPYKN--NNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAY 86

Query: 253 ALNGKFEE-AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           + N  +   AF L+++M    S++P+ +T  +L+ +C     +  G  +H   I+  LGY
Sbjct: 87  SRNLDYASYAFSLINQMA-SESLKPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIK--LGY 143

Query: 312 --DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-------MLYL 362
             ++++  S++  YS    L  A  +F  +    D V+WN+MI G+F+        ML+ 
Sbjct: 144 SDNVVVQTSVLGMYSSCGDLESARRIFECVNG-GDAVAWNTMIVGIFRNDKIEDGLMLFR 202

Query: 363 C--------SQFSFSTLLAILPSCNSPESLEF--GKSIHCWQLKLGFSNNTIGVNALMHM 412
                    +QF++S    +L +C+   S  +  GK IH   +      +    NAL+ M
Sbjct: 203 SMLMSGVDPTQFTYSM---VLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDM 259

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y +CGD+  AF +  +I HN +   WN +I  C++NG  ++AI  ++ + +     PD  
Sbjct: 260 YCSCGDMKEAFYVFGKI-HNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEY 318

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T    I A    E    GK LHG   K        V   L++MY +  + +SA  VF   
Sbjct: 319 TFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVI 378

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVLRHGK 589
              ++  W  MI   S+      A++LF  +  E N     S+ S+L AC+ + +LR G+
Sbjct: 379 TERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQ 438

Query: 590 QIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISAYGYHG 634
             H      GF     +S AL+DMY  N K   A              W+SM+ AY  HG
Sbjct: 439 VFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHG 498

Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
              +A   F ++  +G  P   + +SLL+ACSH G   EG ++  N ++E  +    +H+
Sbjct: 499 MVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEG-KFLWNQMKEQGITAGFKHY 557

Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMGKQVAELLFKLE 753
            C+V ++ ++G L EA E IK  P +     +W  +LSAC +  + ++G   A+ + KL+
Sbjct: 558 SCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAADQILKLD 617

Query: 754 PENVGYYISLSNMYVALGRWKDAVEIGK 781
           PE+   +I LSN+Y   GRWKD  E+ +
Sbjct: 618 PEDTATHILLSNLYAVNGRWKDVAEMRR 645



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 161/612 (26%), Positives = 270/612 (44%), Gaps = 58/612 (9%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHFFGEMVEEGIR 70
           +L++ Y      E +  LF +   ++VV++NA+ +A   N            +M  E ++
Sbjct: 50  NLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLK 109

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S+T   +V   T +  +  G ++H   IK G   +  +    + MY+ CGDL S+   
Sbjct: 110 PNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 169

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  ++  D V+WNT++ G   N+  E  L+ FR M  SG      + S  + A + LG  
Sbjct: 170 FECVNGGDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSY 229

Query: 191 SY--GKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
            Y  GK+IHA  I      D P   V N+L+ MY  CGD++ A   F  +   ++VSWN+
Sbjct: 230 RYSVGKLIHARMIVSDILADLP---VENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNS 286

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II G + NG  E+A  +   +  + +  PD  T    I   A+      G+ +HG   + 
Sbjct: 287 IISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTK- 345

Query: 308 LLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
            LGY+  + +  +L+  Y K+     A+ +F  I    D+V W  MI G           
Sbjct: 346 -LGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITE-RDVVLWTEMIVGESRVGNSECAV 403

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
            LF EM    ++    +L ++L +C+    L  G+  H   +K GF N      AL+ MY
Sbjct: 404 QLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMY 463

Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
              G    A S+   +S N D  CWN ++ A +Q+G  ++A ++F     +   +PD+VT
Sbjct: 464 GKNGKYETAESIFSLVS-NPDLKCWNSMLGAYSQHGMVEKA-QSFFEQILENGFTPDAVT 521

Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
            +++++AC +     EGK L                                + + E   
Sbjct: 522 YLSLLAACSHKGSTQEGKFLW-------------------------------NQMKEQGI 550

Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISI-VSILSACTQLGVLRHGKQIH 592
                 ++CM+S  S+      ALEL +    E N+  +  ++LSAC     L+ G    
Sbjct: 551 TAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYAA 610

Query: 593 GHVFHLGFQENS 604
             +  L  ++ +
Sbjct: 611 DQILKLDPEDTA 622



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 231/469 (49%), Gaps = 24/469 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+  ++   TS+L  YS+    ES+  +F      D V WN MI     N  +  GL  F
Sbjct: 142 GYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIEDGLMLF 201

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQ--GRVVHCLSIKAGMIADSSLCNVFVNMYA 119
             M+  G+     T  ++++A +++   +   G+++H   I + ++AD  + N  ++MY 
Sbjct: 202 RSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYC 261

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNVSLS 178
            CGD+  +   F  +H  + VSWN+I+SGC  N + E+ +L +R  +  S  + D  + S
Sbjct: 262 SCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFS 321

Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
           +A+ A+A   +  +GK++H    KLGYE S +V  T  L+SMY + G+ E+A++ F  +T
Sbjct: 322 AAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTT--LLSMYFKNGEAESAQKVFGVIT 379

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +DVV W  +I G +  G  E A  L  EM   ++   D  ++ +++  C+D  +LR+G+
Sbjct: 380 ERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKN-RTDGFSLSSVLGACSDMAMLRQGQ 438

Query: 299 SVHGYAIRRLLGYDLLMMNS--LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
             H  AI+   G+D +M  S  L+D Y K+     AE +F+ ++   DL  WNSM+    
Sbjct: 439 VFHSLAIK--TGFDNVMSVSGALVDMYGKNGKYETAESIFSLVS-NPDLKCWNSMLGAYS 495

Query: 357 KEMLYLCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
           +  +   +Q  F             T L++L +C+   S + GK +     + G +    
Sbjct: 496 QHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFK 555

Query: 405 GVNALMHMYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQ 452
             + ++ +    G L  A  L+ Q    N+    W  ++ AC    + Q
Sbjct: 556 HYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQ 604


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 305/620 (49%), Gaps = 39/620 (6%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK +H L I+ G+ D   V V  SL+ MY +   +    + F  M  ++VV+W +++ G+
Sbjct: 122 GKQLHGLCIRCGH-DRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGY 180

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             +G   +  +L   M+    V P+  T  +++S+ A   ++  GR VH  +++      
Sbjct: 181 IQDGALSDVMELFFRMR-AEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCST 239

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEML 360
           + + NSLM+ Y+K   + +A ++F  +    D+VSWN++++GL            F +  
Sbjct: 240 VFVCNSLMNMYAKCGLVEEARVVFCGM-ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSR 298

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
              +  + ST   ++  C + + L   + +H   LK GF +    + ALM  Y   G L 
Sbjct: 299 SSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLG 358

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
            A  +   +S + +   W  +I  C QNG    A   F  M ++   +P+  T   +++A
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRM-REDGVAPNDFTYSTILTA 417

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
                +A     +H   +K+     + V  AL+  Y +  + + A ++F+     ++ +W
Sbjct: 418 ----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSW 473

Query: 541 NCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSAC-TQLGVLRHGKQIHGHVF 596
           + M++ ++Q      A  +F  +     +PNE +I S++ AC +    +  G+Q H    
Sbjct: 474 SAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISI 533

Query: 597 HLGFQENSFISSALLDMYS--------NC-------KSNAAWSSMISAYGYHGKGWEAIE 641
                +   +SSAL+ MY+         C       +   +W+SM+S Y  HG   +A++
Sbjct: 534 KHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALD 593

Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML 701
           +F +M   GI     + +S++  C+H+GLV+EG +Y+++M  +Y + P  EH+ C+VD+ 
Sbjct: 594 VFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLY 653

Query: 702 GRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYI 761
            R+GKL EA   I+ +     P VW  +L AC  H + ++GK  AE L  LEP +   Y+
Sbjct: 654 SRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYV 713

Query: 762 SLSNMYVALGRWKDAVEIGK 781
            LSN+Y A G+WK+  E+ K
Sbjct: 714 LLSNIYSAAGKWKEKDEVRK 733



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 143/585 (24%), Positives = 271/585 (46%), Gaps = 29/585 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           TSL+  Y           +F     ++VVTW +++T  +++  +   +  F  M  EG+ 
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVW 202

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            +S T   ++S +     +  GR VH  S+K G  +   +CN  +NMYAKCG +  +   
Sbjct: 203 PNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 262

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F GM   D VSWNT+M+G + N +  + L  F +   S       + ++ +   A + +L
Sbjct: 263 FCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQL 322

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT-CKDVVSWNAII 249
              + +H+  +K G+    Y +V  +L+  YS+ G +  A   F  M+  ++VVSW A+I
Sbjct: 323 GLARQLHSSVLKRGFHS--YGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMI 380

Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
           +G   NG    A  L   M+    V P+  T  T+++    SL  +    +H   I+   
Sbjct: 381 NGCIQNGDVPLAAALFSRMR-EDGVAPNDFTYSTILTASVASLPPQ----IHAQVIKTNY 435

Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFK 357
               ++  +L+  YSK  +  +A  +F  I    D+VSW++M+            + +F 
Sbjct: 436 ECTSIVGTALLASYSKLCNTEEALSIFKMI-DQKDVVSWSAMLTCYAQAGDSDGATNIFI 494

Query: 358 EMLYLCSQFSFSTLLAILPSCNSPES-LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
           +M     + +  T+ +++ +C SP + ++ G+  H   +K    +     +AL+ MY   
Sbjct: 495 KMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARK 554

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G + +A  + +R + + D   WN ++    Q+G+ Q+A+  F+ M + +    D VT ++
Sbjct: 555 GSIESAQCIFERQT-DRDLVSWNSMLSGYAQHGYSQKALDVFRQM-EAEGIEMDGVTFLS 612

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFES-CY 533
           VI  C +  L  EG+     ++    G+   +++   ++ +Y R   +  A ++ E   +
Sbjct: 613 VIMGCAHAGLVEEGQRYFD-SMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF 671

Query: 534 NCNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
                 W  ++ A   +K  E+  L   + L  EP + +   +LS
Sbjct: 672 PAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLS 716



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 178/357 (49%), Gaps = 14/357 (3%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALF-YETCNKDVVTWNAMITACVENRCVVMGLH 59
           RGF ++    T+L+ AYS      ++L +F   + +++VV+W AMI  C++N  V +   
Sbjct: 335 RGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAA 394

Query: 60  FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  M E+G+  +  T   I++A    +       +H   IK      S +    +  Y+
Sbjct: 395 LFSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYS 450

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           K  +   +   F  +   D VSW+ +++        +     F +M   G + +  ++SS
Sbjct: 451 KLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISS 510

Query: 180 AVAASAC-LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
            + A A     +  G+  HA+ IK    D+  + V+++L+SMY++ G IE+A+  F   T
Sbjct: 511 VIDACASPTAGVDLGRQFHAISIKHRCHDA--LCVSSALVSMYARKGSIESAQCIFERQT 568

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +D+VSWN+++ G+A +G  ++A D+  +M+    +E D  T +++I  CA + L+ EG+
Sbjct: 569 DRDLVSWNSMLSGYAQHGYSQKALDVFRQME-AEGIEMDGVTFLSVIMGCAHAGLVEEGQ 627

Query: 299 SVHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIA-PMNDLVSWNSMI 352
                ++ R  G    M +   ++D YS++  L +A  L   ++ P   +V W +++
Sbjct: 628 RYFD-SMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV-WRTLL 682



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/389 (20%), Positives = 161/389 (41%), Gaps = 48/389 (12%)

Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           S +T+  +  +    N  D   A      I H +     +  +    + G   +A+  F 
Sbjct: 35  SQSTLACSVPLENQTNLNDATGARQAFDEIPHRN---TLDHALFDHARRGSVHQALDHFL 91

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGR 518
            + +          LV V+  CG++     GK LHGL ++      D  V  +L+ MY +
Sbjct: 92  DVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMK 151

Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSI 575
              +     VFE+    N+ TW  +++ + Q+ A    +ELF  +  E   PN ++  S+
Sbjct: 152 WHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASV 211

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           LS     G++  G+++H      G     F+ ++L++MY+ C               +  
Sbjct: 212 LSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDM 271

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-----------HSG 669
            +W+++++    +G   EA++LFH+  +S    T+S+  +++  C+           HS 
Sbjct: 272 VSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSS 331

Query: 670 LVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
           ++  G   Y N++              ++D   ++G+L  A +    +        W AM
Sbjct: 332 VLKRGFHSYGNVM------------TALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAM 379

Query: 730 LSACSHHGDTKMGKQVAELLFKLEPENVG 758
           ++ C  +GD  +    A L  ++  + V 
Sbjct: 380 INGCIQNGDVPLA---AALFSRMREDGVA 405



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 137/314 (43%), Gaps = 22/314 (7%)

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRI 429
           L+ +L  C S      GK +H   ++ G     +GV  +L+ MY+    +V    + + +
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM 165

Query: 430 SHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFE 489
               +   W  ++    Q+G   + ++ F  M + +   P+SVT  +V+S   +  +   
Sbjct: 166 P-KRNVVTWTSLLTGYIQDGALSDVMELFFRM-RAEGVWPNSVTFASVLSVVASQGMVDL 223

Query: 490 GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           G+ +H  ++K        V N+L+ MY +C  ++ A  VF      ++ +WN +++    
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283

Query: 550 NKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
           N  ++ AL+LF   R       + +  +++  C  +  L   +Q+H  V   GF     +
Sbjct: 284 NGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV 343

Query: 607 SSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
            +AL+D YS                  ++  +W++MI+    +G    A  LF  M   G
Sbjct: 344 MTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDG 403

Query: 651 IRPTKSSVISLLSA 664
           + P   +  ++L+A
Sbjct: 404 VAPNDFTYSTILTA 417



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 3/150 (2%)

Query: 7   LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
           L  S++L++ Y+     ES+  +F    ++D+V+WN+M++   ++      L  F +M  
Sbjct: 541 LCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEA 600

Query: 67  EGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
           EGI  D  T L ++        +++G R    ++   G+          V++Y++ G L+
Sbjct: 601 EGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLD 660

Query: 126 SSECTFSGMH-CADTVSWNTIMSGC-LHNN 153
            +     GM   A  + W T++  C +H N
Sbjct: 661 EAMSLIEGMSFPAGPMVWRTLLGACKVHKN 690


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 303/611 (49%), Gaps = 45/611 (7%)

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
           G  +SP V +    ++   + G +  A   F  M  K+VV+W +++ G+  NG+ E A  
Sbjct: 41  GCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALA 100

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +  +M        D A    L++ CAD   LR G  VH  A+R     D  + + L++ Y
Sbjct: 101 MFADMVESGVAPNDFACNAALVA-CADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMY 159

Query: 324 SKSNSLSKAELLFNAI-APMNDLVSWNSMISGLFK------------EMLYLCSQFSFST 370
           S+  SL  A+ +F+ + +P  D+V + S+IS   +            +ML    + +  T
Sbjct: 160 SRCGSLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHT 217

Query: 371 LLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTI-GVNALMHMYINCGDLVAAFSLLQR 428
           +  IL +C  P  L  G+ IH + +K +G  + ++    AL+  Y   G+   A ++   
Sbjct: 218 MTTILTAC--PRVL--GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDS 273

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           + H  +   W  ++    ++G  +EA++ F  M  +    P+   L  V+ ACG++ L  
Sbjct: 274 L-HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE-GVDPNEFALSIVLGACGSIGL-- 329

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G+ LH  A+K  +  D RV NAL++MYGR   ++    +     N +L +W   ISA  
Sbjct: 330 -GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388

Query: 549 QNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           QN    +A+ L   +    F PN  +  S+LS+C  +  L  G Q H     LG      
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448

Query: 606 ISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFHEMCNSG 650
             +AL++MYS C    +               W+S+I  +  HG   +A+E+F +M ++G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           I+P  S+ + +L  C+HSG+V+EG  ++  M+++Y   P   H+ C++DMLGR+G+  EA
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
              I ++P +P   +W  +L++C  H +  +GK  A+ L +L   +   Y+ +SN+Y   
Sbjct: 569 LRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMH 628

Query: 771 GRWKDAVEIGK 781
           G W+DA ++ +
Sbjct: 629 GEWEDARKVRR 639



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 305/625 (48%), Gaps = 60/625 (9%)

Query: 115 VNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN 174
           +N   K G L  +   F  M   + V+W ++MSG   N  PE  L  F +M  SG   ++
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114

Query: 175 VSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
            + ++A+ A A LG L  G+ +H+L ++ G+    ++   + LI MYS+CG + AA+  F
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIG--SCLIEMYSRCGSLPAAKEVF 172

Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
             M   DVV + ++I  F  NG+FE A + L +M L + ++P+  T+ T+++ C   L  
Sbjct: 173 DRMDSPDVVGYTSLISAFCRNGEFELAAEALIQM-LKQGLKPNEHTMTTILTACPRVL-- 229

Query: 295 REGRSVHGYAIRR--LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
             G+ +HGY I++  L    +    +L+DFYS++     A+ +F+++   N +VSW SM+
Sbjct: 230 --GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKN-VVSWCSMM 286

Query: 353 -----SGLFKEMLYL----------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
                 G  +E L +           ++F+ S +L    +C    S+  G+ +HC  +K 
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLG---ACG---SIGLGRQLHCSAIKH 340

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
               +    NAL+ MY   G +    ++L +I  N D   W   I A  QNG  ++AI  
Sbjct: 341 DLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIAL 399

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITM 515
              M   +  +P+     +V+S+C ++    +G   H LALK  +G D+ +   NALI M
Sbjct: 400 LCQM-HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK--LGCDSEICTGNALINM 456

Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISI 572
           Y +C  + SA   F+  +  ++ +WN +I   +Q+    +ALE+F  +     +P++ + 
Sbjct: 457 YSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 516

Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
           + +L  C   G++  G+      F L           ++D YS   + + ++ MI   G 
Sbjct: 517 LGVLMGCNHSGMVEEGELF----FRL-----------MIDQYSFTPAPSHYACMIDMLGR 561

Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
           +G+  EA+ + ++M      P      +LL++C     +D G    + ++E  D   ++ 
Sbjct: 562 NGRFDEALRMINDM---PFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDR--DSA 616

Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNL 717
            +V + ++    G+ ++A +  + +
Sbjct: 617 SYVLMSNIYAMHGEWEDARKVRRRM 641



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/644 (24%), Positives = 283/644 (43%), Gaps = 78/644 (12%)

Query: 25  SSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALT 84
            +L LF     K+VV W ++++    N      L  F +MVE G+  +       + A  
Sbjct: 66  DALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACA 125

Query: 85  QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
            +  L+ G  VH L+++AG   D+ + +  + MY++CG L +++  F  M   D V + +
Sbjct: 126 DLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTS 185

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA-SACLGELSYGKVIHALGIKL 203
           ++S    N   E       +M   G + +  ++++ + A    LG+  +G +I  +G++ 
Sbjct: 186 LISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLR- 244

Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
               S  V  + +LI  YS+ G+ + A+  F  + CK+VVSW +++  +  +G+ EEA  
Sbjct: 245 ----SQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQ 300

Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFY 323
           +  +M +   V+P+   +  ++  C    L   GR +H  AI+  L  D+ + N+L+  Y
Sbjct: 301 VFGDM-ISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMY 356

Query: 324 SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF------KEMLYLCSQ---------FSF 368
            ++  + + E + N I    DLVSW + IS  F      K +  LC           ++F
Sbjct: 357 GRTGLVEELEAMLNKIEN-PDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAF 415

Query: 369 STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
           S+   +L SC    SL+ G   HC  LKLG  +     NAL++MY  CG + +A  L   
Sbjct: 416 SS---VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSA-RLAFD 471

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           + H  D + WN +I    Q+G   +A++ F  M +     PD  T + V+  C +  +  
Sbjct: 472 VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM-RSNGIKPDDSTFLGVLMGCNHSGMVE 530

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
           EG+    L               +I  Y                +      + CMI    
Sbjct: 531 EGELFFRL---------------MIDQYS---------------FTPAPSHYACMIDMLG 560

Query: 549 QNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
           +N     AL +   + FEP+ +   ++L++C                 H         + 
Sbjct: 561 RNGRFDEALRMINDMPFEPDALIWKTLLASCK---------------LHRNLDIGKLAAD 605

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
            L+++    + +A++  M + Y  HG+  +A ++   M  +G++
Sbjct: 606 RLMELSD--RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVK 647



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 181/384 (47%), Gaps = 36/384 (9%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
           +ST+L+  YS    F+ + A+F     K+VV+W +M+   + +  +   L  FG+M+ EG
Sbjct: 250 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
           +  +   L I++ A   +     GR +HC +IK  +I D  + N  ++MY + G +   E
Sbjct: 310 VDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 366

Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
              + +   D VSW T +S    N + EK +    +M   G   +  + SS +++ A + 
Sbjct: 367 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 426

Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
            L  G   H L +KLG +    +   N+LI+MYS+CG + +A  AF  M   DV SWN++
Sbjct: 427 SLDQGMQFHCLALKLGCDSE--ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSL 484

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           I G A +G   +A ++  +M+    ++PD +T + ++  C  S ++ EG           
Sbjct: 485 IHGHAQHGDANKALEVFSKMR-SNGIKPDDSTFLGVLMGCNHSGMVEEGE---------- 533

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSF 368
                L    ++D YS + + S         A M D++  N    G F E L + +   F
Sbjct: 534 -----LFFRLMIDQYSFTPAPSH-------YACMIDMLGRN----GRFDEALRMINDMPF 577

Query: 369 STLLAI----LPSCNSPESLEFGK 388
                I    L SC    +L+ GK
Sbjct: 578 EPDALIWKTLLASCKLHRNLDIGK 601



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/459 (23%), Positives = 202/459 (44%), Gaps = 26/459 (5%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF       + L+  YS      ++  +F    + DVV + ++I+A   N    +     
Sbjct: 144 GFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEAL 203

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL--CNVFVNMYA 119
            +M+++G++ +  T+  I++A  ++     G+ +H   IK   +   S+      ++ Y+
Sbjct: 204 IQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYS 259

Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
           + G+   ++  F  +HC + VSW ++M   + +   E+ L  F +M   G   +  +LS 
Sbjct: 260 RNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALS- 318

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
            +   AC G +  G+ +H   IK  ++    + V+N+L+SMY + G +E  E     +  
Sbjct: 319 -IVLGAC-GSIGLGRQLHCSAIK--HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN 374

Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
            D+VSW   I     NG  E+A  LL +M       P+     +++S CAD   L +G  
Sbjct: 375 PDLVSWTTAISANFQNGFGEKAIALLCQMH-SEGFTPNGYAFSSVLSSCADVASLDQGMQ 433

Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----- 354
            H  A++     ++   N+L++ YSK   +  A L F+ +   +D+ SWNS+I G     
Sbjct: 434 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFD-VMHTHDVTSWNSLIHGHAQHG 492

Query: 355 -------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQL-KLGFSNNTIGV 406
                  +F +M     +   ST L +L  CN    +E G+      + +  F+      
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHY 552

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             ++ M    G    A  ++  +    D   W  ++ +C
Sbjct: 553 ACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASC 591


>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
          Length = 770

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/502 (32%), Positives = 268/502 (53%), Gaps = 40/502 (7%)

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML 360
           L++ NSL+  Y+K   L  A  LF+ + PM D++S N +  G            L K ML
Sbjct: 90  LVVWNSLLSLYAKCGKLVDAIKLFDEM-PMRDVISQNIVFYGFLRNRETESGFVLLKRML 148

Query: 361 YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
                F  +TL  +L  C++PE     K IH   +  G+       N L+  Y  CG  V
Sbjct: 149 G-SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207

Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
           +   +   +SH  +      VI    +N   ++ ++ F S+ ++    P+SVT ++ ++A
Sbjct: 208 SGRGVFDGMSHR-NVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAA 265

Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
           C   +   EG+ +H L  K  +  +  +++AL+ MY +C  I+ A T+FES    +  + 
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325

Query: 541 NCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSAC-TQLGVLRHGKQIHGH 594
             ++   +QN +E  A++ F  +     E + N +S V  +S     LG+   GKQ+H  
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL---GKQLHSL 382

Query: 595 VFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEA 639
           V    F  N+F+++ L++MYS C               ++  +W+SMI+A+  HG G  A
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAA 442

Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVD 699
           ++L+ EM    ++PT  + +SLL ACSH GL+D+G +  N M E + + P TEH+ CI+D
Sbjct: 443 LKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502

Query: 700 MLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
           MLGR+G L+EA  FI +LP++P   +W A+L ACS HGDT++G+  AE LF+  P++   
Sbjct: 503 MLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSA 562

Query: 760 YISLSNMYVALGRWKDAVEIGK 781
           +I ++N+Y + G+WK+  +  K
Sbjct: 563 HILIANIYSSRGKWKERAKTIK 584



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 219/454 (48%), Gaps = 27/454 (5%)

Query: 112 NVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ 171
           N  +++YAKCG L  +   F  M   D +S N +  G L N   E   +  + M  SG  
Sbjct: 94  NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-G 152

Query: 172 ADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAE 231
            D+ +L+  ++           K+IHAL I  GY+    +SV N LI+ Y +CG   +  
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKE--ISVGNKLITSYFKCGCSVSGR 210

Query: 232 RAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCA 289
             F GM+ ++V++  A+I G   N   E+   L     LMR   V P+  T ++ ++ C+
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLF---SLMRRGLVHPNSVTYLSALAACS 267

Query: 290 DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWN 349
            S  + EG+ +H    +  +  +L + ++LMD YSK  S+  A  +F +   +++ VS  
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE-VSMT 326

Query: 350 SMISGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
            ++ GL            F  ML    +   + + A+L       SL  GK +H   +K 
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
            FS NT   N L++MY  CGDL  + ++ +R+   +  S WN +I A  ++GH   A+K 
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIAAFARHGHGLAALKL 445

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITM 515
           ++ MT  +   P  VT ++++ AC ++ L  +G+ L    +K + G++ R ++   +I M
Sbjct: 446 YEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELLN-EMKEVHGIEPRTEHYTCIIDM 503

Query: 516 YGRCRDIKSASTVFESCYNCNLCT-WNCMISAFS 548
            GR   +K A +  +S      C  W  ++ A S
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 247/532 (46%), Gaps = 64/532 (12%)

Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
           V NSL+S+Y++CG +  A + F  M  +DV+S N +  GF  N + E  F LL  M  + 
Sbjct: 92  VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM--LG 149

Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD--LLMMNSLMDFYSKSNSLS 330
           S   D AT+  ++S+C         + +H  AI  L GYD  + + N L+  Y K     
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAI--LSGYDKEISVGNKLITSYFKCGCSV 207

Query: 331 KAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILPSC 378
               +F+ ++  N +++  ++ISGL +  L+      FS            T L+ L +C
Sbjct: 208 SGRGVFDGMSHRN-VITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266

Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
           +  + +  G+ IH    K G  +     +ALM MY  CG +  A+++ +  +   + S  
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM- 325

Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF------EGKS 492
            +++V   QNG  +EAI+ F  M  Q     D+    NV+SA   L ++F       GK 
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRML-QAGVEIDA----NVVSAV--LGVSFIDNSLGLGKQ 378

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           LH L +K     +T V N LI MY +C D+  + TVF      N  +WN MI+AF+++  
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438

Query: 553 EVRALELFRH---LEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL-GFQENSFISS 608
            + AL+L+     LE +P +++ +S+L AC+ +G++  G+++   +  + G +  +   +
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498

Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHG--KGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
            ++DM           S I +       K W+A                     LL ACS
Sbjct: 499 CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQA---------------------LLGACS 537

Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQEAYEFIKNL 717
             G  + G +Y    L  +   P++   H+ I ++    GK +E  + IK +
Sbjct: 538 FHGDTEVG-EYAAEQL--FQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 222/490 (45%), Gaps = 27/490 (5%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           SLL+ Y+       ++ LF E   +DV++ N +    + NR    G      M+  G  F
Sbjct: 95  SLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GF 153

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           D  TL I++S           +++H L+I +G   + S+ N  +  Y KCG   S    F
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
            GM   + ++   ++SG + N   E  L  F  M       ++V+  SA+AA +    + 
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G+ IHAL  K G E    + + ++L+ MYS+CG IE A   F   T  D VS   I+ G
Sbjct: 274 EGQQIHALLWKYGIESE--LCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331

Query: 252 FALNGKFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
            A NG  EEA      M Q    ++ ++ + V  +S   +SL L  G+ +H   I+R   
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL--GKQLHSLVIKRKFS 389

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
            +  + N L++ YSK   L+ ++ +F  + P  + VSWNSMI+             L++E
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRM-PKRNYVSWNSMIAAFARHGHGLAALKLYEE 448

Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL-GFSNNTIGVNALMHMYINCG 417
           M  L  + +  T L++L +C+    ++ G+ +     ++ G    T     ++ M    G
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508

Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS----VT 473
            L  A S +  +    D   W  ++ AC+ +G  +      + + Q    +PDS    + 
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQ---TAPDSSSAHIL 565

Query: 474 LVNVISACGN 483
           + N+ S+ G 
Sbjct: 566 IANIYSSRGK 575



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 16/358 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G+   +     L+T+Y       S   +F    +++V+T  A+I+  +EN     GL  F
Sbjct: 185 GYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF 244

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M    +  +S T L  ++A +    + +G+ +H L  K G+ ++  + +  ++MY+KC
Sbjct: 245 SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKC 304

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +   F      D VS   I+ G   N   E+ + +F  M  +G + D   +S+ +
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
             S     L  GK +H+L IK  +  + +V+  N LI+MYS+CGD+  ++  F  M  ++
Sbjct: 365 GVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN--NGLINMYSKCGDLTDSQTVFRRMPKRN 422

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR--- 298
            VSWN++I  FA +G    A  L  EM  +  V+P   T ++L+  C+   L+ +GR   
Sbjct: 423 YVSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELL 481

Query: 299 ----SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
                VHG   R            ++D   ++  L +A+   +++    D   W +++
Sbjct: 482 NEMKEVHGIEPRT------EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 153/378 (40%), Gaps = 51/378 (13%)

Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP--------------------- 469
           H +    WN ++    + G   +AIK F  M  +   S                      
Sbjct: 86  HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145

Query: 470 --------DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
                   D  TL  V+S C   E     K +H LA+ S    +  V N LIT Y +C  
Sbjct: 146 RMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
             S   VF+   + N+ T   +IS   +N+     L LF   R     PN ++ +S L+A
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAW-------------- 623
           C+    +  G+QIH  ++  G +    I SAL+DMYS C S   AW              
Sbjct: 266 CSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           + ++     +G   EAI+ F  M  +G+    + V ++L        +  G Q ++ +++
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
                  T  +  +++M  + G L ++    + +P +     W +M++A + HG      
Sbjct: 386 R-KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVS-WNSMIAAFARHGHGLAAL 443

Query: 744 QVAELLFKLE--PENVGY 759
           ++ E +  LE  P +V +
Sbjct: 444 KLYEEMTTLEVKPTDVTF 461


>gi|302762016|ref|XP_002964430.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
 gi|300168159|gb|EFJ34763.1| hypothetical protein SELMODRAFT_61701 [Selaginella moellendorffii]
          Length = 603

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 185/617 (29%), Positives = 305/617 (49%), Gaps = 58/617 (9%)

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           GK  HA  +  G+  + Y+   N L+ MY++CG +  A++ F  +  K+V +W  ++ G+
Sbjct: 2   GKWGHAHALSHGHRSNRYLG--NCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGY 59

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL-LLREGRSVHGYAIRRLLGY 311
           A  G+FE +  L  EM L R  EP      +    C  +L +L +GR VHG A       
Sbjct: 60  ADFGEFERSVALFREM-LARG-EPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSFSS 117

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLC--- 363
            +   N+L+  Y K  S+  A+ +F+++   N +V+WN++I+     GL++E+ +L    
Sbjct: 118 RITAGNALISMYGKCGSIPDAKNVFDSMQERN-VVTWNALIAAYAQNGLYREIEWLLPAM 176

Query: 364 -------SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
                  ++ SF  +   +PS    ++    + +H     LG   + +G  AL+ MY  C
Sbjct: 177 EVDGVRPNKISFMGISLAVPSFR--DAFVSARQVHKRMFDLGL--DLVGYTALVKMYGRC 232

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
           G +  A  + + I    D   W  ++ +  QNG    A + ++ M Q +   P+ +TL+ 
Sbjct: 233 GQVEDAEVVFEGIPWK-DVVAWTAMVTSFAQNGFSDRAFEYYRKM-QLEGRVPNKITLLG 290

Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
           ++ AC +   A   + +     ++    DT V+NAL++ +GR   I  A   F+S    N
Sbjct: 291 IVDACDS---AHRCREIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIGKRN 347

Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
           L +WN MI A  Q++     L+ +R L+ +    + IS + +L  C  L  L  GK+ H 
Sbjct: 348 LVSWNAMIFALVQHQKFEEVLDAYRQLQLDGEKADRISFIGVLDGCAMLEDLVEGKKAHR 407

Query: 594 HVFHLGFQENSFISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKG 636
           HV   G  ++  I +AL++MY  C S                   +WSSMISAY   G  
Sbjct: 408 HVLEKGLSKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYARRGLP 467

Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
            EA+EL   M   G+ P   + ISLLS CS+ GLVDE  Q + ++  ++ ++P  EH   
Sbjct: 468 DEALELLGSMIQLGLDPDGVTFISLLSGCSYGGLVDEACQCFYSLEHDHGLKPGVEHQRI 527

Query: 697 IVDMLGRSGKLQEAYEFI------KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
           +VD+LGR+G L EA +        KN  I+   G W ++LS+C + GD++ G + A    
Sbjct: 528 MVDVLGRAGWLDEAEKMAGMASDEKN--IEGGTGAWTSLLSSCRNFGDSERGARAAAAAS 585

Query: 751 KLEPENVGYYISLSNMY 767
           + EP     Y+ LS++Y
Sbjct: 586 QREPGRASSYLILSSIY 602



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 272/581 (46%), Gaps = 56/581 (9%)

Query: 91  QGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCL 150
           +G+  H  ++  G  ++  L N  + MY +CG ++ ++  F  +   +  +W  +M G  
Sbjct: 1   RGKWGHAHALSHGHRSNRYLGNCLMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYA 60

Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                E+ +  FREM   GE A+  + S A+     L  L  G+V+H +  ++ +  S  
Sbjct: 61  DFGEFERSVALFREMLARGEPANEYTFSCALTCLGALRMLEQGRVVHGIAREMSF--SSR 118

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           ++  N+LISMY +CG I  A+  F  M  ++VV+WNA+I  +A NG + E   LL  M++
Sbjct: 119 ITAGNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEV 178

Query: 271 MRSVEPDIATVVTLISLCADSL--LLREGRSVHGYAIRRL--LGYDLLMMNSLMDFYSKS 326
              V P+  + +  ISL   S        R VH    +R+  LG DL+   +L+  Y + 
Sbjct: 179 -DGVRPNKISFMG-ISLAVPSFRDAFVSARQVH----KRMFDLGLDLVGYTALVKMYGRC 232

Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAI 374
             +  AE++F  I P  D+V+W +M++              +++M       +  TLL I
Sbjct: 233 GQVEDAEVVFEGI-PWKDVVAWTAMVTSFAQNGFSDRAFEYYRKMQLEGRVPNKITLLGI 291

Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
           + +C+S       + I     +  F ++T   NAL+  +   G +  A    + I   + 
Sbjct: 292 VDACDSAHRC---REIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIGKRNL 348

Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
            S WN +I A  Q+  F+E +  ++ + Q      D ++ + V+  C  LE   EGK  H
Sbjct: 349 VS-WNAMIFALVQHQKFEEVLDAYRQL-QLDGEKADRISFIGVLDGCAMLEDLVEGKKAH 406

Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL--CTWNCMISAFSQNKA 552
              L+  +  D  ++NAL+ MYGRC  ++ A  VFE     ++   +W+ MISA+++   
Sbjct: 407 RHVLEKGLSKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYARRGL 466

Query: 553 EVRALELFR---HLEFEPNEISIVSILSACTQLGVLRHGKQI-----HGHVFHLGFQENS 604
              ALEL      L  +P+ ++ +S+LS C+  G++    Q      H H    G +   
Sbjct: 467 PDEALELLGSMIQLGLDPDGVTFISLLSGCSYGGLVDEACQCFYSLEHDHGLKPGVEHQR 526

Query: 605 FISSAL-----LD-------MYSNCKS----NAAWSSMISA 629
            +   L     LD       M S+ K+      AW+S++S+
Sbjct: 527 IMVDVLGRAGWLDEAEKMAGMASDEKNIEGGTGAWTSLLSS 567



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 219/483 (45%), Gaps = 24/483 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  Y+   Y   +  +F +   K+V TW  ++    +       +  F EM+  G   +
Sbjct: 24  LMIMYNRCGYVHEAQKIFDDIVWKNVFTWTVLMKGYADFGEFERSVALFREMLARGEPAN 83

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T    ++ L  +  L+QGRVVH ++ +    +  +  N  ++MY KCG +  ++  F 
Sbjct: 84  EYTFSCALTCLGALRMLEQGRVVHGIAREMSFSSRITAGNALISMYGKCGSIPDAKNVFD 143

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS-LSSAVAASACLGELS 191
            M   + V+WN +++    N    +       M   G + + +S +  ++A  +      
Sbjct: 144 SMQERNVVTWNALIAAYAQNGLYREIEWLLPAMEVDGVRPNKISFMGISLAVPSFRDAFV 203

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
             + +H     LG +   Y     +L+ MY +CG +E AE  F G+  KDVV+W A++  
Sbjct: 204 SARQVHKRMFDLGLDLVGYT----ALVKMYGRCGQVEDAEVVFEGIPWKDVVAWTAMVTS 259

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           FA NG  + AF+   +MQL   V P+  T++ ++  C  +   RE R+      R     
Sbjct: 260 FAQNGFSDRAFEYYRKMQLEGRV-PNKITLLGIVDACDSAHRCREIRT---RMERAPFQS 315

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQF 366
           D  + N+L+  + +  S+  A   F +I   N LVSWN+MI  L     F+E+L    Q 
Sbjct: 316 DTSVKNALLSRFGRLGSIDDARDAFKSIGKRN-LVSWNAMIFALVQHQKFEEVLDAYRQL 374

Query: 367 SFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
                     + + +L  C   E L  GK  H   L+ G S + +  NAL++MY  C  +
Sbjct: 375 QLDGEKADRISFIGVLDGCAMLEDLVEGKKAHRHVLEKGLSKDRMIRNALVNMYGRCSSV 434

Query: 420 VAAFSLLQRISHNSDTSC-WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
             A  + ++I     T   W+ +I A  + G   EA++   SM  Q    PD VT ++++
Sbjct: 435 EKARQVFEKIEEKDITQVSWSSMISAYARRGLPDEALELLGSMI-QLGLDPDGVTFISLL 493

Query: 479 SAC 481
           S C
Sbjct: 494 SGC 496



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 219/501 (43%), Gaps = 35/501 (6%)

Query: 3   FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
           F + +    +L++ Y        +  +F     ++VVTWNA+I A  +N           
Sbjct: 115 FSSRITAGNALISMYGKCGSIPDAKNVFDSMQERNVVTWNALIAAYAQNGLYREIEWLLP 174

Query: 63  EMVEEGIRFDSTTLLIIVSALTQM-NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            M  +G+R +  + + I  A+    +     R VH      G+  D       V MY +C
Sbjct: 175 AMEVDGVRPNKISFMGISLAVPSFRDAFVSARQVHKRMFDLGL--DLVGYTALVKMYGRC 232

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G +  +E  F G+   D V+W  +++    N + ++   Y+R+M   G   + ++L   V
Sbjct: 233 GQVEDAEVVFEGIPWKDVVAWTAMVTSFAQNGFSDRAFEYYRKMQLEGRVPNKITLLGIV 292

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPY---VSVTNSLISMYSQCGDIEAAERAFWGMT 238
              AC              I+   E +P+    SV N+L+S + + G I+ A  AF  + 
Sbjct: 293 --DAC------DSAHRCREIRTRMERAPFQSDTSVKNALLSRFGRLGSIDDARDAFKSIG 344

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
            +++VSWNA+I     + KFEE  D   ++QL    + D  + + ++  CA    L EG+
Sbjct: 345 KRNLVSWNAMIFALVQHQKFEEVLDAYRQLQL-DGEKADRISFIGVLDGCAMLEDLVEGK 403

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-DLVSWNSMIS---- 353
             H + + + L  D ++ N+L++ Y + +S+ KA  +F  I   +   VSW+SMIS    
Sbjct: 404 KAHRHVLEKGLSKDRMIRNALVNMYGRCSSVEKARQVFEKIEEKDITQVSWSSMISAYAR 463

Query: 354 -GLFKEMLYLCS---QFSFS----TLLAILPSCNSPESLE-----FGKSIHCWQLKLGFS 400
            GL  E L L     Q        T +++L  C+    ++     F    H   LK G  
Sbjct: 464 RGLPDEALELLGSMIQLGLDPDGVTFISLLSGCSYGGLVDEACQCFYSLEHDHGLKPGVE 523

Query: 401 NNTIGVNALMHM-YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           +  I V+ L    +++  + +A  +  ++ +    T  W  ++ +C   G  +   +   
Sbjct: 524 HQRIMVDVLGRAGWLDEAEKMAGMASDEK-NIEGGTGAWTSLLSSCRNFGDSERGARAAA 582

Query: 460 SMTQQQNASPDSVTLVNVISA 480
           + +Q++     S  +++ I A
Sbjct: 583 AASQREPGRASSYLILSSIYA 603


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 267/512 (52%), Gaps = 66/512 (12%)

Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
           A ++F+ +   N  V WN+MI G            ++ EML         T   +L    
Sbjct: 72  ARMVFDTMPGPNHFV-WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFT 130

Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
              +++ G+ +H   +KLGFS+N    NAL+H+Y   G++  A  +  R S   D   WN
Sbjct: 131 RDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDR-SSKGDVVTWN 189

Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
           ++I    ++  F E++K F  M ++    P S+TLV+V+SAC  L+    GK +H   +K
Sbjct: 190 VMISGYNRSKQFDESMKLFDEM-ERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRY-VK 247

Query: 500 SLMGLDTRV-QNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQ--------- 549
            L     RV +NALI MY  C D+ +A  +F++  + ++ +W  +++ F+          
Sbjct: 248 DLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARN 307

Query: 550 --NKAEVR--------------------ALELFRHLE---FEPNEISIVSILSACTQLGV 584
             +K   R                     L LFR ++    +P+E ++VSIL+AC  LG 
Sbjct: 308 YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367

Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
           L  G+ I  ++     + +SF+ +AL+DMY NC               +   +W+++I  
Sbjct: 368 LELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427

Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP 689
              +G G EA+++F +M  + I P + + I +L AC+HSG+VD+G +++  M  ++ + P
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEP 487

Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELL 749
              H+ C+VD+LGR+G L+EA+E IKN+P++P   VWG++L AC  H D +M +  A+ +
Sbjct: 488 NVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQI 547

Query: 750 FKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
            +LEPEN   Y+ L N+Y A  RW+   E+ K
Sbjct: 548 LELEPENGAVYVLLCNIYAACNRWEKLHEVRK 579



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 244/564 (43%), Gaps = 67/564 (11%)

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK--CGDLNSSECT 130
            T  L ++     M  LKQ   +H  +I  G+I++  +    +    K   GD+  +   
Sbjct: 19  QTPPLSLIKTCKSMAQLKQ---IHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMV 75

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F  M   +   WN ++ G      P   +  + EM   G   D  +    +        +
Sbjct: 76  FDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAV 135

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ +H   +KLG+  S  V V N+LI +YS  G++  A   F   +  DVV+WN +I 
Sbjct: 136 KCGRELHDHIVKLGF--SSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMIS 193

Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
           G+  + +F+E+  L  EM+ MR V P   T+V+++S C+    L  G+ VH Y     + 
Sbjct: 194 GYNRSKQFDESMKLFDEMERMR-VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIE 252

Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIA------------------------------ 340
              ++ N+L+D Y+    +  A  +F+ +                               
Sbjct: 253 PVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKM 312

Query: 341 PMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGK 388
           P  D VSW +MI G      FKE+L L  +   +       T+++IL +C    +LE G+
Sbjct: 313 PERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGE 372

Query: 389 SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQN 448
            I  +  K     ++   NAL+ MY NCG++  A  +   + H    S W  VI     N
Sbjct: 373 WIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKIS-WTAVIFGLAIN 431

Query: 449 GHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV 508
           G+ +EA+  F  M  + + +PD VT + V+ AC +  +  +GK      + +  G++  V
Sbjct: 432 GYGEEALDMFSQML-KASITPDEVTCIGVLCACTHSGMVDKGKKFFA-RMTTQHGIEPNV 489

Query: 509 QN--ALITMYGRCRDIKSASTVFESC-YNCNLCTWNCMISA----FSQNKAEVRALELFR 561
            +   ++ + GR   +K A  V ++     N   W  ++ A      +  AE+ A ++  
Sbjct: 490 AHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQI-- 547

Query: 562 HLEFEPNE----ISIVSILSACTQ 581
            LE EP      + + +I +AC +
Sbjct: 548 -LELEPENGAVYVLLCNIYAACNR 570



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 216/504 (42%), Gaps = 59/504 (11%)

Query: 40  TWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLS 99
            WN MI       C    +  + EM+E G+  D  T   ++   T+   +K GR +H   
Sbjct: 86  VWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHI 145

Query: 100 IKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
           +K G  ++  + N  +++Y+  G+++ +   F      D V+WN ++SG   +   ++ +
Sbjct: 146 VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESM 205

Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLIS 219
             F EM        +++L S ++A + L +L+ GK +H     L  E  P   + N+LI 
Sbjct: 206 KLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIE--PVRVLENALID 263

Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAI------------------------------- 248
           MY+ CGD++ A   F  M  +DV+SW AI                               
Sbjct: 264 MYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAM 323

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
           IDG+    +F+E   L  EMQ   +++PD  T+V++++ CA    L  G  +  Y  +  
Sbjct: 324 IDGYLQVNRFKEVLSLFREMQAA-NIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNE 382

Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------F 356
           +  D  + N+L+D Y    ++ KA  +FNA+ P  D +SW ++I GL            F
Sbjct: 383 IKIDSFVGNALIDMYFNCGNVEKAIRIFNAM-PHRDKISWTAVIFGLAINGYGEEALDMF 441

Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNTIGVNALMHMYIN 415
            +ML         T + +L +C     ++ GK        + G   N      ++ +   
Sbjct: 442 SQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGR 501

Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--NASPDS-- 471
            G L  A  +++ +    ++  W  ++ AC    H  E +     M  QQ     P++  
Sbjct: 502 AGHLKEAHEVIKNMPVKPNSIVWGSLLGACRV--HRDEEM---AEMAAQQILELEPENGA 556

Query: 472 --VTLVNVISACGNLELAFEGKSL 493
             V L N+ +AC   E   E + L
Sbjct: 557 VYVLLCNIYAACNRWEKLHEVRKL 580



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 176/384 (45%), Gaps = 37/384 (9%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF +++    +L+  YS       +  +F  +   DVVTWN MI+    ++     +  F
Sbjct: 149 GFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLF 208

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
            EM    +   S TL+ ++SA +++  L  G+ VH       +     L N  ++MYA C
Sbjct: 209 DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAAC 268

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGC-------LHNNY----PEK------------- 157
           GD++++   F  M   D +SW  I++G        L  NY    PE+             
Sbjct: 269 GDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYL 328

Query: 158 -------CLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPY 210
                   L  FREM  +  + D  ++ S + A A LG L  G+ I A   K   +   +
Sbjct: 329 QVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSF 388

Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
           V   N+LI MY  CG++E A R F  M  +D +SW A+I G A+NG  EEA D+  +M L
Sbjct: 389 VG--NALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQM-L 445

Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGY-AIRRLLGYDLLMMNSLMDFYSKSNSL 329
             S+ PD  T + ++  C  S ++ +G+        +  +  ++     ++D   ++  L
Sbjct: 446 KASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHL 505

Query: 330 SKA-ELLFNAIAPMNDLVSWNSMI 352
            +A E++ N     N +V W S++
Sbjct: 506 KEAHEVIKNMPVKPNSIV-WGSLL 528



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 151/343 (44%), Gaps = 17/343 (4%)

Query: 11  TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
           T+++T ++N+     +   F +   +D V+W AMI   ++       L  F EM    I+
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349

Query: 71  FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
            D  T++ I++A   +  L+ G  +     K  +  DS + N  ++MY  CG++  +   
Sbjct: 350 PDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRI 409

Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           F+ M   D +SW  ++ G   N Y E+ L  F +M  +    D V+    + A    G +
Sbjct: 410 FNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMV 469

Query: 191 SYGKVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAI 248
             GK   A +  + G E  P V+    ++ +  + G ++ A      M  K + + W ++
Sbjct: 470 DKGKKFFARMTTQHGIE--PNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSL 527

Query: 249 IDGFALNGKFEEAFDLLHEM--QLMRSVEPDIATVVTLI----SLCADSLLLREGRSV-H 301
           +    ++   E A     EM  Q +  +EP+   V  L+    + C     L E R +  
Sbjct: 528 LGACRVHRDEEMA-----EMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMM 582

Query: 302 GYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMN 343
              I++  G  L+ MN S+ +F +      +++ +++ +  M+
Sbjct: 583 DRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMS 625


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 248/467 (53%), Gaps = 39/467 (8%)

Query: 347  SWNSMISGLFKEMLYLCSQFSFSTL--LAILP----------SCNSPESLEFGKSIHCWQ 394
            SWNS+I+ L +    + +  +FS+L  L ++P          SC++   L  G+  H   
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 395  LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
               GF  +    +AL+ MY  CG L  A +L   I   +  S W  +I    QN     A
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS-WTSMITGYVQNEQADNA 2100

Query: 455  IKTFKSMTQQQ-------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
            +  FK   +++       N   DSV +V+V+SAC  +      + +HG  +K        
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 2160

Query: 508  VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF----RHL 563
            V N L+  Y +C     +  VF+     +  +WN MI+ ++Q+     ALE+F    RH+
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 2220

Query: 564  EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
                N +++ ++L AC   G LR GK IH  V  +  + N  + ++++DMY  C      
Sbjct: 2221 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMA 2280

Query: 618  ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
                     K+  +W++M++ YG HG+  EA+++F++M  +G++P   + +S+L+ACSH+
Sbjct: 2281 KKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHA 2340

Query: 669  GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
            GLV+EG  ++N M  +YD+ P  EH+ C+VD+ GR+G L EAY  IK + ++P   VWG+
Sbjct: 2341 GLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGS 2400

Query: 729  MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
            +L AC  H +  +G+  A+ LF+L+P+N GYY+ LSN+Y   GRW D
Sbjct: 2401 LLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 2447



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 192/395 (48%), Gaps = 54/395 (13%)

Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
           L +L +C + + L   + IH   ++ G SN+ +    L+H+Y   G +  A  L  +I  
Sbjct: 31  LFLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-Q 86

Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
           N  T  WN++I A T NG  ++A+  +K+M  Q  A+ D  T   VI AC N      GK
Sbjct: 87  NPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAA-DKFTFPFVIKACTNFLSIDLGK 145

Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCR------------------------------- 520
            +HG  +K     D  VQN LI  Y +C                                
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCG 205

Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILS 577
           D++ A  +F+   + N+ +W  MI+ + +N+    ALELF+ ++ E   PNE ++VS++ 
Sbjct: 206 DLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIK 265

Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAA 622
           ACT++G+L  G+ IH +      +   ++ +AL+DMYS C               KS   
Sbjct: 266 ACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT 325

Query: 623 WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNML 682
           W+SMI++ G HG G EA+ LF EM    ++P   + I +L AC H   V EG  Y+  M 
Sbjct: 326 WNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMT 385

Query: 683 EEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
           + Y + P  EH+ C+ ++  RS  L EA++  K +
Sbjct: 386 QHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 2    GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
            GF   L  S++L+  YS     + + ALF E   ++VV+W +MIT  V+N      L  F
Sbjct: 2045 GFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLF 2104

Query: 62   GEMVEE--------GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
             + +EE         +  DS  ++ ++SA ++++       VH   +K G      + N 
Sbjct: 2105 KDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNT 2164

Query: 114  FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQA 172
             ++ YAKCG    S+  F  M   D +SWN++++    +    + L  F  M    G + 
Sbjct: 2165 LMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRY 2224

Query: 173  DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            + V+LS+ + A A  G L  GK IH   IK+  E +  V V  S+I MY +CG +E A++
Sbjct: 2225 NAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN--VCVGTSIIDMYCKCGRVEMAKK 2282

Query: 233  AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
             F  M  K+V SW A++ G+ ++G+ +EA D+ ++M +   V+P+  T V++++ C+ + 
Sbjct: 2283 TFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKM-VRAGVKPNYITFVSVLAACSHAG 2341

Query: 293  LLREG-----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
            L+ EG        H Y I   + +       ++D + ++  L++A  L   +    D V 
Sbjct: 2342 LVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 2397

Query: 348  WNSMI 352
            W S++
Sbjct: 2398 WGSLL 2402



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 208/442 (47%), Gaps = 33/442 (7%)

Query: 30   FYETCNK-DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNC 88
            FY+  +K +V +WN++I         V  L  F  + + G+    ++    + + + +  
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 89   LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
            L  GR+ H  +   G   D  + +  ++MY+KCG L  +   F  +   + VSW ++++G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090

Query: 149  CLHNNYPEKCLLYFR---EMGWSGEQADNVSLSSAVAAS---ACLGELSYG--KVIHALG 200
             + N   +  LL F+   E     E  +NV L S V  S   AC      G  + +H   
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150

Query: 201  IKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
            +K G++ S  + V N+L+  Y++CG    +++ F  M  KD +SWN++I  +A +G   E
Sbjct: 2151 VKKGFDGS--IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 2208

Query: 261  AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
            A ++ H M     V  +  T+  ++  CA +  LR G+ +H   I+  L Y++ +  S++
Sbjct: 2209 ALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSII 2268

Query: 321  DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSF 368
            D Y K   +  A+  F+ +   N + SW +M++G            +F +M+    + ++
Sbjct: 2269 DMYCKCGRVEMAKKTFDRMKEKN-VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 2327

Query: 369  STLLAILPSCNSPESLE-----FGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
             T +++L +C+    +E     F    H + ++ G  +       ++ ++   G L  A+
Sbjct: 2328 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAY 2383

Query: 424  SLLQRISHNSDTSCWNIVIVAC 445
            +L++R+    D   W  ++ AC
Sbjct: 2384 NLIKRMKMKPDFVVWGSLLGAC 2405



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 42/317 (13%)

Query: 87  NC--LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNT 144
           NC   K  R +H   I++G+  D  L    +++Y+  G +  +   F  +    T +WN 
Sbjct: 36  NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNL 95

Query: 145 IMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLG 204
           I+     N   E+ L+ ++ M   G  AD  +    + A      +  GKV+H   IK G
Sbjct: 96  IIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 205 YEDSPYVSVTNSLISMYSQ-------------------------------CGDIEAAERA 233
           +  S  V V N+LI  Y +                               CGD++ A R 
Sbjct: 156 F--SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213

Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
           F  +  K+VVSW A+I+G+  N + EEA +L   MQ   ++ P+  T+V+LI  C +  +
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ-AENIFPNEYTMVSLIKACTEMGI 272

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
           L  GR +H YAI+  +   + +  +L+D YSK  S+  A  +F  + P   L +WNSMI+
Sbjct: 273 LTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM-PRKSLPTWNSMIT 331

Query: 354 -----GLFKEMLYLCSQ 365
                GL +E L L S+
Sbjct: 332 SLGVHGLGQEALNLFSE 348



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 53/364 (14%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           +  L+  YS       ++ LFY+  N    TWN +I A   N      L  +  MV +GI
Sbjct: 62  TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGI 121

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG------- 122
             D  T   ++ A T    +  G+VVH   IK G   D  + N  ++ Y KCG       
Sbjct: 122 AADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALK 181

Query: 123 ------------------------DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKC 158
                                   DL  +   F  +   + VSW  +++G + N  PE+ 
Sbjct: 182 VFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEA 241

Query: 159 LLYFREMGWSGEQADNV-----SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
           L  F+ M     QA+N+     ++ S + A   +G L+ G+ IH   IK   E   Y+  
Sbjct: 242 LELFKRM-----QAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGT 296

Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
             +LI MYS+CG I+ A   F  M  K + +WN++I    ++G  +EA +L  EM+ + +
Sbjct: 297 --ALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERV-N 353

Query: 274 VEPDIATVVTLISLCADSLLLREG-----RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           V+PD  T + ++  C     ++EG     R    Y I  +  +       + + Y++SN+
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH----YECMTELYARSNN 409

Query: 329 LSKA 332
           L +A
Sbjct: 410 LDEA 413



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 1    RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
            +GF   +    +L+ AY+       S  +F     KD ++WN+MI    ++      L  
Sbjct: 2153 KGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEV 2212

Query: 61   FGEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
            F  MV   G+R+++ TL  ++ A      L+ G+ +H   IK  +  +  +    ++MY 
Sbjct: 2213 FHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYC 2272

Query: 120  KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
            KCG +  ++ TF  M   +  SW  +++G   +   ++ L  F +M  +G + + ++  S
Sbjct: 2273 KCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVS 2332

Query: 180  AVAASACLGELSYGKVIHAL-GIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
             +AA +  G +  G   H    +K  Y+  P +     ++ ++ + G +  A      M 
Sbjct: 2333 VLAACSHAGLVEEG--WHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390

Query: 239  CK-DVVSWNAII 249
             K D V W +++
Sbjct: 2391 MKPDFVVWGSLL 2402


>gi|242065278|ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
 gi|241933759|gb|EES06904.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 197/708 (27%), Positives = 335/708 (47%), Gaps = 49/708 (6%)

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMI-ADSSLCNVFVNMYAKCGDLNSS 127
           +R D+    + + A   +  L  GR +H    K G + AD  + N  V MY+ C  L  +
Sbjct: 112 VRPDAFVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCA 171

Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
           E  F  +   D VSW +++S    N    + L+ F EM   G   D  +LS A+ A++ L
Sbjct: 172 EKVFGSITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAASSL 231

Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
           G +  G  +H   IK+G     ++   N LI  Y + G+++     F  M  KD+VSWN 
Sbjct: 232 GHVGLGHQLHCCMIKMGLVGKEFLD--NCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNT 289

Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
           II  +A N   EEA      M +    E D  T+ +++ +   +     G  +HGY IR 
Sbjct: 290 IIQCYAENLCHEEASAHFRAM-MFEFAECDEFTLGSILHVVTATGAFGHGMEIHGYLIRA 348

Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFS 367
            L  D  +M++L+D Y    +L K   +F    P+  ++ +   + G   + +   S   
Sbjct: 349 GLDSDKHVMSALIDMYVNWATLHKRYRVF----PLR-MLKYYLTVQGKLDQFIVASS--- 400

Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
                  L SC S   L  G+ +H   LK   + ++   ++L+ MY  CG L  +  L  
Sbjct: 401 -------LKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGALEESNMLFS 453

Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
           R + N  T+ W+  I     NG +  A+  F+ M Q ++  P+  T   +++AC  L   
Sbjct: 454 R-TKNPGTAVWSAAISGNCLNGQYGRAVHLFRRM-QSEHVQPNEFTYTAILTACMALGDT 511

Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
             G  +H  +++S  G +T V  +LIT Y R      A  +  +  N ++ +W+ ++ +F
Sbjct: 512 DSGMEIHSNSIRSGYGTNTSVLKSLITFYLRQGRYHQALKLCLALSNHDI-SWDTLVESF 570

Query: 548 SQNKAEVRALELFR-------HLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
           SQ    V  + LF        +L++    +    ILS+C +LG+L  G Q H ++   G 
Sbjct: 571 SQVDHHVGIVNLFHVIQRCGANLDYHTARL----ILSSCGKLGLLEEGLQAHAYMTKRGL 626

Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
              +  +S L+DMYS+C               K  ++W+S+++A   +G    AI LF +
Sbjct: 627 ASTACTNSYLIDMYSSCGSLRHAFDAFNYMPDKDASSWTSIVAANVENGCPETAIRLFSQ 686

Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
           M     RPT  + +S+L AC+ +GLV+E  +++ +M E Y ++P  EH+  ++++L R+G
Sbjct: 687 MQKEKCRPTPEAFLSVLKACARTGLVNEAFRFFASMTEVYKIQPSEEHYSHMIEVLSRAG 746

Query: 706 KLQEAYEFIKN-LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
             +EA  FI + +P +     W  + +A   +G+ K  K   + L +L
Sbjct: 747 MFKEAEHFIDSVVPSESGASAWSLLCAAAKQNGNDKTVKLAGDRLARL 794



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 256/596 (42%), Gaps = 48/596 (8%)

Query: 5   AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
           A L  +  L+T YS+      +  +F    + D+V+W +M++A  EN C    L  F EM
Sbjct: 150 ADLFVANGLVTMYSSCQSLRCAEKVFGSITSPDLVSWTSMLSAYTENGCDAEALMLFMEM 209

Query: 65  VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
             +GI  D+ TL + + A + +  +  G  +HC  IK G++    L N  +  Y + G+L
Sbjct: 210 ARDGIACDAFTLSVALRAASSLGHVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGEL 269

Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
                 F  M+  D VSWNTI+     N   E+   +FR M +   + D  +L S +   
Sbjct: 270 QLMRNVFDEMNGKDLVSWNTIIQCYAENLCHEEASAHFRAMMFEFAECDEFTLGSILHVV 329

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
              G   +G  IH   I+ G +   +  V ++LI MY     +    R F     K  ++
Sbjct: 330 TATGAFGHGMEIHGYLIRAGLDSDKH--VMSALIDMYVNWATLHKRYRVFPLRMLKYYLT 387

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
               +D F                            V + +  CA  L L  GR +H   
Sbjct: 388 VQGKLDQF---------------------------IVASSLKSCASGLDLVAGRMLHACI 420

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
           ++  +  D  + +SL+D Y+K  +L ++ +LF+        V W++ ISG          
Sbjct: 421 LKSNMNPDSFVTSSLVDMYAKCGALEESNMLFSRTKNPGTAV-WSAAISGNCLNGQYGRA 479

Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
             LF+ M     Q +  T  AIL +C +    + G  IH   ++ G+  NT  + +L+  
Sbjct: 480 VHLFRRMQSEHVQPNEFTYTAILTACMALGDTDSGMEIHSNSIRSGYGTNTSVLKSLITF 539

Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
           Y+  G    A  L   +S N D S W+ ++ + +Q  H    +  F  + Q+  A+ D  
Sbjct: 540 YLRQGRYHQALKLCLALS-NHDIS-WDTLVESFSQVDHHVGIVNLFH-VIQRCGANLDYH 596

Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
           T   ++S+CG L L  EG   H    K  +       + LI MY  C  ++ A   F   
Sbjct: 597 TARLILSSCGKLGLLEEGLQAHAYMTKRGLASTACTNSYLIDMYSSCGSLRHAFDAFNYM 656

Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
            + +  +W  +++A  +N     A+ LF  ++ E   P   + +S+L AC + G++
Sbjct: 657 PDKDASSWTSIVAANVENGCPETAIRLFSQMQKEKCRPTPEAFLSVLKACARTGLV 712



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 122/289 (42%), Gaps = 6/289 (2%)

Query: 10  STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
           ++SL+  Y+     E S  LF  T N     W+A I+    N      +H F  M  E +
Sbjct: 432 TSSLVDMYAKCGALEESNMLFSRTKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHV 491

Query: 70  RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
           + +  T   I++A   +     G  +H  SI++G   ++S+    +  Y + G  + +  
Sbjct: 492 QPNEFTYTAILTACMALGDTDSGMEIHSNSIRSGYGTNTSVLKSLITFYLRQGRYHQALK 551

Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
               +   D +SW+T++      ++    +  F  +   G   D  +    +++   LG 
Sbjct: 552 LCLALSNHD-ISWDTLVESFSQVDHHVGIVNLFHVIQRCGANLDYHTARLILSSCGKLGL 610

Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNS-LISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
           L  G   HA   K G   +   + TNS LI MYS CG +  A  AF  M  KD  SW +I
Sbjct: 611 LEEGLQAHAYMTKRGLAST---ACTNSYLIDMYSSCGSLRHAFDAFNYMPDKDASSWTSI 667

Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
           +     NG  E A  L  +MQ      P     ++++  CA + L+ E 
Sbjct: 668 VAANVENGCPETAIRLFSQMQ-KEKCRPTPEAFLSVLKACARTGLVNEA 715



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 5/104 (4%)

Query: 1   RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
           RG  +   T++ L+  YS+      +   F    +KD  +W +++ A VEN C    +  
Sbjct: 624 RGLASTACTNSYLIDMYSSCGSLRHAFDAFNYMPDKDASSWTSIVAANVENGCPETAIRL 683

Query: 61  FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM 104
           F +M +E  R      L ++ A     C + G V       A M
Sbjct: 684 FSQMQKEKCRPTPEAFLSVLKA-----CARTGLVNEAFRFFASM 722


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 167/551 (30%), Positives = 285/551 (51%), Gaps = 38/551 (6%)

Query: 266 HEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAI--RRLLGYDLLMMNSLMD 321
           H+  L++S  V   +   + L+ + AD+  L+ G+ +H + I   +    +++ +NSL++
Sbjct: 11  HKPFLLKSSTVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLIN 70

Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA-------- 373
            Y+K + +  A +LF+ +   N +VSW ++++G F   L L     F T+++        
Sbjct: 71  LYAKCDQIMVARILFDGMRKRN-VVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNE 129

Query: 374 -----ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
                I+ SC+    +  G   H + LK G   +    NAL+ MY    D+  A S+   
Sbjct: 130 YIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYE 189

Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
           +    D   +NI+I    +NG+  EA++    M  +     D+VT V     C +L+   
Sbjct: 190 VP-GLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVW-DNVTYVTAFGLCSHLKDLR 247

Query: 489 EGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS 548
            G  +H    ++    D+ V +A+I MYG+C +I +A  VF      N+ +W  +++A+S
Sbjct: 248 LGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYS 307

Query: 549 QNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
           QN     AL  F  +E +   PNE +   +L++C  +  L HGK +H  +   GF+++  
Sbjct: 308 QNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHII 367

Query: 606 ISSALLDMYSN---------------CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           + +AL++MYS                C+ +  WS+MI    +HG G EA+ +F EM  + 
Sbjct: 368 VGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAK 427

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
             P   + + +LSAC+H G V EG  Y N ++++  + P  EH+ CIV +L ++G+L EA
Sbjct: 428 ECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEA 487

Query: 711 YEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVAL 770
             F+K+ P++     W  +LSAC  H +  +GK+VAEL+ +++P +VG YI LSNMY   
Sbjct: 488 ENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKA 547

Query: 771 GRWKDAVEIGK 781
            RW   V+I K
Sbjct: 548 KRWDGVVKIRK 558



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 202/423 (47%), Gaps = 18/423 (4%)

Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
           +  SA    L +GK+IHA  I         +   NSLI++Y++C  I  A   F GM  +
Sbjct: 32  LKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKR 91

Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
           +VVSW A++ G+  NG   E   L   M  +  + P+     T+IS C+DS  + EG   
Sbjct: 92  NVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQC 151

Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--- 357
           HGYA++  L +   + N+L+  YS+ + +  A  ++  + P  D+ S+N +I+GL +   
Sbjct: 152 HGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEV-PGLDVFSYNIIINGLLENGY 210

Query: 358 ---------EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
                     M+  C  +   T +     C+  + L  G  +HC   + G   ++   +A
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           ++ MY  CG+++ A  +  R+   +  S W  ++ A +QNG F+EA+  F  M +     
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQTKNVVS-WTAILAAYSQNGCFEEALNFFPEM-EVDGLL 328

Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
           P+  T   ++++C  +     GK LH    KS       V NALI MY +   I++A  V
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388

Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVL 585
           F      +  TW+ MI   S +     AL +F+ +      P+ ++ V +LSAC  LG +
Sbjct: 389 FLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448

Query: 586 RHG 588
           + G
Sbjct: 449 QEG 451



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 209/439 (47%), Gaps = 25/439 (5%)

Query: 68  GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV--FVNMYAKCGDLN 125
           G   + T  L+ VSA T+   LK G+++H   I        ++  V   +N+YAKC  + 
Sbjct: 22  GHPLEHTIQLLKVSADTKN--LKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIM 79

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSSAVAAS 184
            +   F GM   + VSW  +M+G  HN    + L  F+ M      + +    ++ +++ 
Sbjct: 80  VARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSC 139

Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
           +  G++  G   H   +K G     YV   N+LI MYS+  D++ A   ++ +   DV S
Sbjct: 140 SDSGQVVEGWQCHGYALKSGLVFHQYVK--NALICMYSRRSDVKGAMSVWYEVPGLDVFS 197

Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
           +N II+G   NG   EA ++L  M +   +  D  T VT   LC+    LR G  VH   
Sbjct: 198 YNIIINGLLENGYPSEALEVLDRM-VDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRM 256

Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEM 359
            R    YD  + ++++D Y K  ++  A  +FN +   N +VSW ++++     G F+E 
Sbjct: 257 FRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKN-VVSWTAILAAYSQNGCFEEA 315

Query: 360 LYLCSQFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
           L    +     LL        +L SC    +L  GK +H    K GF ++ I  NAL++M
Sbjct: 316 LNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINM 375

Query: 413 YINCGDLVAAFSL-LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
           Y   G + AA  + L+ I  +S T  W+ +I   + +G  +EA+  F+ M   +   P  
Sbjct: 376 YSKSGSIEAAHKVFLEMICRDSIT--WSAMICGLSHHGLGREALVVFQEMLAAKEC-PHY 432

Query: 472 VTLVNVISACGNLELAFEG 490
           VT V V+SAC +L    EG
Sbjct: 433 VTFVGVLSACAHLGSVQEG 451



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 177/358 (49%), Gaps = 12/358 (3%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G + H     +L+  YS  S  + +++++YE    DV ++N +I   +EN      L   
Sbjct: 159 GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVL 218

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             MV+E I +D+ T +      + +  L+ G  VHC   + G   DS + +  ++MY KC
Sbjct: 219 DRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKC 278

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G++ ++   F+ +   + VSW  I++    N   E+ L +F EM   G   +  + +  +
Sbjct: 279 GNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLL 338

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            + A +  L +GK++H    K G+ED  ++ V N+LI+MYS+ G IEAA + F  M C+D
Sbjct: 339 NSCAGISALGHGKLLHTRIKKSGFED--HIIVGNALINMYSKSGSIEAAHKVFLEMICRD 396

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
            ++W+A+I G + +G   EA  +  EM   +   P   T V ++S CA    ++EG    
Sbjct: 397 SITWSAMICGLSHHGLGREALVVFQEMLAAKEC-PHYVTFVGVLSACAHLGSVQEGF--- 452

Query: 302 GYAIRRLLGYDLL-----MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
            Y + +L+    +         ++    K+  L +AE    +     D+V+W +++S 
Sbjct: 453 -YYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF  H+    +L+  YS     E++  +F E   +D +TW+AMI     +      L  F
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYAK 120
            EM+         T + ++SA   +  +++G   ++ L  + G+          V +  K
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480

Query: 121 CGDLNSSECTFSGMHCA-DTVSWNTIMSGC-LHNNY 154
            G L+ +E          D V+W T++S C +H NY
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516


>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 271/519 (52%), Gaps = 43/519 (8%)

Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLF 356
           G  +H  A++     + ++ NS++  Y K + +  A  +F+ + P  D ++WNS+I+G  
Sbjct: 70  GTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTM-PHRDPITWNSLINGYL 128

Query: 357 -----KEML------YLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                +E L      YL        LLA ++  C      + G+ IH     L   N  I
Sbjct: 129 HNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIH----ALVVVNERI 184

Query: 405 GVN-----ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
           G +     AL+  Y  CGD + A  +   +   +  S W  +I  C  +  + EA   F+
Sbjct: 185 GQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVS-WTTMISGCIAHQDYDEAFACFR 243

Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
           +M Q +   P+ VT + ++SAC        GK +HG A +          +AL+ MY +C
Sbjct: 244 AM-QAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQC 302

Query: 520 RD-IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSI 575
            + +  A  +FE     ++  W+ +I +FS+     +AL+LF   R  E EPN ++++++
Sbjct: 303 GEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAV 362

Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
           +SACT L  L+HG  +HG++F  GF  +  + +AL++MY+ C               + N
Sbjct: 363 ISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDN 422

Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
             WSS+ISAYG HG G +A+++F+EM   G++P   + +++LSAC+H+GLV EG + +  
Sbjct: 423 VTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQ 482

Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
           +  + ++    EH+ C+VD+LGRSGKL+ A E  + +P++P   +W +++SAC  HG   
Sbjct: 483 VRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLD 542

Query: 741 MGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
           + + +A  L + EP N G Y  L+ +Y   G W D  ++
Sbjct: 543 IAEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQV 581



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 220/449 (48%), Gaps = 18/449 (4%)

Query: 58  LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
           L  F E+   G    S  L  ++ A +   C   G  +HCL++K G  +++ + N  + M
Sbjct: 36  LQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITM 95

Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
           Y K  D+ S+   F  M   D ++WN++++G LHN Y E+ L    ++   G       L
Sbjct: 96  YFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELL 155

Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
           +S V+          G+ IHAL + +       + ++ +L+  Y +CGD   A R F GM
Sbjct: 156 ASVVSMCGRRMGSKIGRQIHAL-VVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGM 214

Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
             K+VVSW  +I G   +  ++EAF     MQ    V P+  T + L+S CA+   ++ G
Sbjct: 215 EVKNVVSWTTMISGCIAHQDYDEAFACFRAMQ-AEGVCPNRVTSIALLSACAEPGFVKHG 273

Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
           + +HGYA R          ++L++ Y +    +  AEL+F   +   D+V W+S+I    
Sbjct: 274 KEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEG-SSFRDVVLWSSIIGSFS 332

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF +M     + ++ TLLA++ +C +  SL+ G  +H +  K GF  +  
Sbjct: 333 RRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSIS 392

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             NAL++MY  CG L  +  +   +  N D   W+ +I A   +G  ++A++ F  M  +
Sbjct: 393 VGNALINMYAKCGCLNGSRKMFLEMP-NRDNVTWSSLISAYGLHGCGEQALQIFYEM-NE 450

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL 493
           +   PD++T + V+SAC +  L  EG+ +
Sbjct: 451 RGVKPDAITFLAVLSACNHAGLVAEGQRI 479



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 230/492 (46%), Gaps = 29/492 (5%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
            S S++T Y   S   S+  +F    ++D +TWN++I   + N  +   L    ++   G
Sbjct: 88  VSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLG 147

Query: 69  IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS-LCNVFVNMYAKCGDLNSS 127
           +      L  +VS   +    K GR +H L +    I  S  L    V+ Y +CGD   +
Sbjct: 148 LVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMA 207

Query: 128 ECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
              F GM   + VSW T++SGC+ H +Y E     FR M   G   + V+  + ++A A 
Sbjct: 208 LRVFDGMEVKNVVSWTTMISGCIAHQDYDEA-FACFRAMQAEGVCPNRVTSIALLSACAE 266

Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGD-IEAAERAFWGMTCKDVVSW 245
            G + +GK IH    + G+E  P  S +++L++MY QCG+ +  AE  F G + +DVV W
Sbjct: 267 PGFVKHGKEIHGYAFRHGFESCP--SFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLW 324

Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
           ++II  F+  G   +A  L ++M+    +EP+  T++ +IS C +   L+ G  +HGY  
Sbjct: 325 SSIIGSFSRRGDSFKALKLFNKMR-TEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIF 383

Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
           +    + + + N+L++ Y+K   L+ +  +F  + P  D V+W+S+IS            
Sbjct: 384 KFGFCFSISVGNALINMYAKCGCLNGSRKMFLEM-PNRDNVTWSSLISAYGLHGCGEQAL 442

Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-----A 408
            +F EM     +    T LA+L +CN    +  G+ I     K   ++  I +       
Sbjct: 443 QIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRI----FKQVRADCEIPLTIEHYAC 498

Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
           L+ +    G L  A  + + +        W+ ++ AC  +G    A      + + +  +
Sbjct: 499 LVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNN 558

Query: 469 PDSVTLVNVISA 480
             + TL+N I A
Sbjct: 559 AGNYTLLNTIYA 570



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           GF   +    +L+  Y+       S  +F E  N+D VTW+++I+A   + C    L  F
Sbjct: 386 GFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIF 445

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVV 95
            EM E G++ D+ T L ++SA      + +G+ +
Sbjct: 446 YEMNERGVKPDAITFLAVLSACNHAGLVAEGQRI 479


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 164/516 (31%), Positives = 263/516 (50%), Gaps = 66/516 (12%)

Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI- 352
           L+  R+VH   I   L Y+  +   LM  Y+    ++ A  +F+ I P  +++  N MI 
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEI-PERNVIIINVMIR 114

Query: 353 ----SGLFKEMLY----LCS---QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
               +G ++E +     +CS   +    T   +L +C+   ++  GK IH    K+G S+
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
                N L+ MY  CG L  A  +L  +S   D   WN ++    QN  F +A++  + M
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-DVVSWNSLVAGYAQNQRFDDALEVCREM 233

Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
            +    S D+ T+ +++ A  N                      T  +N    MY     
Sbjct: 234 -ESVKISHDAGTMASLLPAVSN----------------------TTTEN---VMY----- 262

Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSA 578
                 +F      +L +WN MI  + +N   V A+EL+  +E   FEP+ +SI S+L A
Sbjct: 263 ---VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPA 319

Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
           C     L  GK+IHG++       N  + +AL+DMY+ C               +   +W
Sbjct: 320 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSW 379

Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
           ++MISAYG+ G+G +A+ LF +M +SG+ P   + ++ L+ACSH+GL++EG   +  M +
Sbjct: 380 TAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 439

Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGK 743
            Y + P  EH  C+VD+LGR+GK++EAY+FI+ +P++P   VWGA+L AC  H +T +G 
Sbjct: 440 HYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGL 499

Query: 744 QVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
             A+ LF+L PE  GYY+ LSN+Y   GRW++   I
Sbjct: 500 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 535



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 253/571 (44%), Gaps = 58/571 (10%)

Query: 194 KVIHALGIKLGYEDSPY-VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
           K +  +  ++  ED  Y  S+   L+  Y+   D+  A + F  +  ++V+  N +I  +
Sbjct: 57  KTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSY 116

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             NG + E   +   M     V+PD  T   ++  C+ S  +  G+ +HG A +  L   
Sbjct: 117 VNNGFYREGIQVFGTMCSCH-VKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLL 372
           L + N L+  Y K   LS+A L+ + ++   D+VSWNS+++G      Y  +Q  F   L
Sbjct: 176 LFVGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVAG------YAQNQ-RFDDAL 227

Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
            +   C   ES++           L   +NT   N    MY+          +  ++   
Sbjct: 228 EV---CREMESVKISHDAGTMASLLPAVSNTTTENV---MYVK--------DMFFKMGKK 273

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
           S  S WN++I    +N    EA++ +  M +     PD+V++ +V+ ACG+      GK 
Sbjct: 274 SLVS-WNVMIGVYMKNAMPVEAVELYSGM-EADGFEPDAVSITSVLPACGDTSALSLGKK 331

Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
           +HG   +  +  +  ++NALI MY +C  +  A  VFE+  + ++ +W  MISA+  +  
Sbjct: 332 IHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGR 391

Query: 553 EVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
              A+ LF  ++     P+ I+ V+ L+AC+  G+L  G+      F L           
Sbjct: 392 GCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRS----CFKL----------- 436

Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
           + D Y         + M+   G  GK  EA +   EM    + P +    +LL AC    
Sbjct: 437 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEM---PMEPNERVWGALLGACRVHS 493

Query: 670 LVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGRSGKLQEA---YEFIKNLPIQPKPGV 725
             D GL   + +   + + PE   ++V + ++  ++G+ +E       +K+  ++  PG 
Sbjct: 494 NTDIGLLAADKL---FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGA 550

Query: 726 WGAMLSACSHH---GDTKMGKQVAELLFKLE 753
               ++   H    GD +   Q AE+  +L+
Sbjct: 551 SNVEVNRIIHTFLVGD-RSHPQSAEIYRELD 580



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 196/451 (43%), Gaps = 60/451 (13%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+ AY+++    ++  +F E   ++V+  N MI + V N     G+  FG M    ++ D
Sbjct: 81  LMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPD 140

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
             T   ++ A +    +  G+ +H  + K G+ +   + N  V+MY KCG L+ +     
Sbjct: 141 HYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 200

Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSY 192
            M   D VSWN++++G   N   +  L   REM       ++V +S      A L     
Sbjct: 201 EMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM-------ESVKISHDAGTMASL----- 248

Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
                           P VS T +   MY         +  F+ M  K +VSWN +I  +
Sbjct: 249 ---------------LPAVSNTTTENVMY--------VKDMFFKMGKKSLVSWNVMIGVY 285

Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD 312
             N    EA +L   M+     EPD  ++ +++  C D+  L  G+ +HGY  R+ L  +
Sbjct: 286 MKNAMPVEAVELYSGME-ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPN 344

Query: 313 LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEML 360
           LL+ N+L+D Y+K   L +A  +F  +    D+VSW +MIS             LF +M 
Sbjct: 345 LLLENALIDMYAKCGCLDRARDVFENMKS-RDVVSWTAMISAYGFSGRGCDAVALFSKMQ 403

Query: 361 ---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL---MHMYI 414
               +    +F T LA   +C+    LE G+S  C++L       T  +  L   + +  
Sbjct: 404 DSGLVPDSIAFVTTLA---ACSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLG 458

Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
             G +  A+  +Q +    +   W  ++ AC
Sbjct: 459 RAGKVKEAYKFIQEMPMEPNERVWGALLGAC 489



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 203/473 (42%), Gaps = 55/473 (11%)

Query: 89  LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
           LK  R VH   I   +  +SSL    +  YA   D+ ++   F  +   + +  N ++  
Sbjct: 56  LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRS 115

Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
            ++N +  + +  F  M     + D+ +    + A +C G +  GK IH    K+G   +
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175

Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
            +V   N L+SMY +CG +  A      M+ +DVVSWN+++ G+A N +F++A ++  EM
Sbjct: 176 LFVG--NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREM 233

Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
           + ++ +  D  T+ +L+   +++                                +  N 
Sbjct: 234 ESVK-ISHDAGTMASLLPAVSNT--------------------------------TTENV 260

Query: 329 LSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFS------------TLLAILP 376
           +   ++ F        LVSWN MI    K  + + +   +S            ++ ++LP
Sbjct: 261 MYVKDMFFK--MGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLP 318

Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
           +C    +L  GK IH +  +     N +  NAL+ MY  CG L  A  + + +  + D  
Sbjct: 319 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMK-SRDVV 377

Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
            W  +I A   +G   +A+  F  M Q     PDS+  V  ++AC +  L  EG+S   L
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKM-QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 436

Query: 497 ALKSLMGLDTRVQNA--LITMYGRCRDIKSA-STVFESCYNCNLCTWNCMISA 546
            +     +  R+++   ++ + GR   +K A   + E     N   W  ++ A
Sbjct: 437 -MTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488


>gi|357128364|ref|XP_003565843.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Brachypodium distachyon]
          Length = 728

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 177/609 (29%), Positives = 301/609 (49%), Gaps = 46/609 (7%)

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL-------HE 267
           N+ +    Q G +  A   F G   +D  S++A++ G A  G F  A  L          
Sbjct: 44  NARLKRLVQSGRLADAHSLFDGAPHRDEASYSALLAGHAAAGDFAGAMALFVRLRRTSSS 103

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
            + + + +P + ++V   S     LLL    S+H +A+R      + +  +L D Y+K+ 
Sbjct: 104 SRPLDAADPFVLSLVFKASAADPGLLLPHAASLHAFAVRSSALSSVFVATALADAYAKAG 163

Query: 328 SLSKAELLFNAI-APMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILP-SCNSPES-- 383
            L+ A  +F+ + A   ++VSW ++++ L +      +  +F+ + A    +C+S     
Sbjct: 164 RLALALRVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMRASAGVACDSHAYAA 223

Query: 384 ----------LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNS 433
                     L  G+ +H    KLG        N L  +Y   GD+  A + + R+  + 
Sbjct: 224 ALTACADAGMLSRGREVHALCAKLGLDATPYVANTLATLYARWGDVGRALAAVGRMG-SR 282

Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN---ASPDSVTLVNVISACGNLELAFEG 490
           D + W  VI +  Q G  +EAI+ F +M + +    ASP+  T   VI+AC +      G
Sbjct: 283 DVAAWTTVISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVIAACADTSCVCLG 342

Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCR-DIKSASTVFESCYNCNLCTWNCMISAFSQ 549
           + LHG   +        V N+L+T+Y R    + +A  VF+     ++ +W+ +IS ++Q
Sbjct: 343 EQLHGQVAQRGFASARSVANSLVTLYARVAGRLSAADAVFQESAAKDVVSWSAIISGYAQ 402

Query: 550 NKAEVRALELF----RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSF 605
                 A  LF    RH    PNE ++ S+LS C     L  G+Q+H  V   G + ++ 
Sbjct: 403 EGLAGEAFALFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQLHALVMAAGLEHHAM 462

Query: 606 ISSALLDMY--SNCKSNA-------------AWSSMISAYGYHGKGWEAIELFHEMCNSG 650
           I SAL+DMY  S   S+A             +W++MI  +  HG+   A+ELF EMC  G
Sbjct: 463 IRSALVDMYGKSGSMSDADVVFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVG 522

Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEA 710
           ++P   + I +LSAC H+G V+ GL+Y + M + Y + P  EH+ C+VD+LGR+G++ EA
Sbjct: 523 LKPDHVAFIGVLSACCHAGEVELGLRYLSAMSKIYGLEPAKEHYGCVVDLLGRAGRINEA 582

Query: 711 YEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
            E I  +    + G VW ++L AC+  G+ + GK+ A    + EP   G +++++N+Y +
Sbjct: 583 EELIGRMAANERDGVVWTSLLRACAARGEEETGKKAAARAMEAEPWGAGAHVAMANLYAS 642

Query: 770 LGRWKDAVE 778
            G+W +A +
Sbjct: 643 KGQWCEAAQ 651



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 226/503 (44%), Gaps = 36/503 (7%)

Query: 9   TSTSLLTAYSNVSYFESSLALFYE--TCNKDVVTWNAMITACVENRCVVMGLHFFGEM-V 65
            +T+L  AY+       +L +F E     ++VV+W  ++ A          L  F EM  
Sbjct: 151 VATALADAYAKAGRLALALRVFDEMPAARRNVVSWTTLVAALSRAGRRHDALRAFAEMRA 210

Query: 66  EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
             G+  DS      ++A      L +GR VH L  K G+ A   + N    +YA+ GD+ 
Sbjct: 211 SAGVACDSHAYAAALTACADAGMLSRGREVHALCAKLGLDATPYVANTLATLYARWGDVG 270

Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYF----REMGWSGEQADNVSLSSAV 181
            +      M   D  +W T++S  +     ++ +  F    R    +    +  + ++ +
Sbjct: 271 RALAAVGRMGSRDVAAWTTVISSYVQTGRAKEAIEAFVAMVRNEAVNAASPNEYTYAAVI 330

Query: 182 AASA-----CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ-CGDIEAAERAFW 235
           AA A     CLGE  +G+V      + G+  +   SV NSL+++Y++  G + AA+  F 
Sbjct: 331 AACADTSCVCLGEQLHGQV-----AQRGFASAR--SVANSLVTLYARVAGRLSAADAVFQ 383

Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
               KDVVSW+AII G+A  G   EAF L  EM+      P+  T+ +L+S+CA +  L 
Sbjct: 384 ESAAKDVVSWSAIISGYAQEGLAGEAFALFTEMRRHHCPRPNEFTLASLLSVCATAATLD 443

Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
            GR +H   +   L +  ++ ++L+D Y KS S+S A+++F+     +D+VSW +MI G 
Sbjct: 444 AGRQLHALVMAAGLEHHAMIRSALVDMYGKSGSMSDADVVFSNRT-KDDVVSWTAMIVGH 502

Query: 355 -----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNN 402
                      LF+EM  +  +      + +L +C     +E G + +       G    
Sbjct: 503 AEHGQSKRALELFEEMCLVGLKPDHVAFIGVLSACCHAGEVELGLRYLSAMSKIYGLEPA 562

Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNS-DTSCWNIVIVACTQNGHFQEAIK-TFKS 460
                 ++ +    G +  A  L+ R++ N  D   W  ++ AC   G  +   K   ++
Sbjct: 563 KEHYGCVVDLLGRAGRINEAEELIGRMAANERDGVVWTSLLRACAARGEEETGKKAAARA 622

Query: 461 MTQQQNASPDSVTLVNVISACGN 483
           M  +   +   V + N+ ++ G 
Sbjct: 623 MEAEPWGAGAHVAMANLYASKGQ 645



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 7/264 (2%)

Query: 1   RGFLAHLPTSTSLLTAYSNVS-YFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
           RGF +    + SL+T Y+ V+    ++ A+F E+  KDVV+W+A+I+   +         
Sbjct: 352 RGFASARSVANSLVTLYARVAGRLSAADAVFQESAAKDVVSWSAIISGYAQEGLAGEAFA 411

Query: 60  FFGEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
            F EM      R +  TL  ++S       L  GR +H L + AG+   + + +  V+MY
Sbjct: 412 LFTEMRRHHCPRPNEFTLASLLSVCATAATLDAGRQLHALVMAAGLEHHAMIRSALVDMY 471

Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
            K G ++ ++  FS     D VSW  ++ G   +   ++ L  F EM   G + D+V+  
Sbjct: 472 GKSGSMSDADVVFSNRTKDDVVSWTAMIVGHAEHGQSKRALELFEEMCLVGLKPDHVAFI 531

Query: 179 SAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
             ++A    GE+  G + + A+    G E  P       ++ +  + G I  AE     M
Sbjct: 532 GVLSACCHAGEVELGLRYLSAMSKIYGLE--PAKEHYGCVVDLLGRAGRINEAEELIGRM 589

Query: 238 TC--KDVVSWNAIIDGFALNGKFE 259
               +D V W +++   A  G+ E
Sbjct: 590 AANERDGVVWTSLLRACAARGEEE 613


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 171/519 (32%), Positives = 258/519 (49%), Gaps = 42/519 (8%)

Query: 294 LREGRSVHGYAIRRLLGYDL-LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
           +R GR VH   ++ L       + N L++ YSK +    A L+   + P  ++VSW S+I
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR-LTPARNVVSWTSLI 80

Query: 353 SGL------------FKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKL 397
           SGL            F EM     + + F+F      + S   P +   GK IH   +K 
Sbjct: 81  SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT---GKQIHALAVKC 137

Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
           G   +     +   MY        A  L   I    +   WN  I     +G  +EAI+ 
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER-NLETWNAFISNSVTDGRPREAIEA 196

Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYG 517
           F    ++ +  P+S+T    ++AC +      G  LHGL L+S    D  V N LI  YG
Sbjct: 197 FIEF-RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255

Query: 518 RCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVS 574
           +C+ I+S+  +F      N  +W  +++A+ QN  + +A  L+   R    E ++  I S
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315

Query: 575 ILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KS 619
           +LSAC  +  L  G+ IH H      +   F+ SAL+DMY  C               K+
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375

Query: 620 NAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS--SVISLLSACSHSGLVDEGLQY 677
               +S+I  Y + G+   A+ LF EM   G  PT +  + +SLLSACS +G V+ G++ 
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435

Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
           +++M   Y + P  EH+ CIVDMLGR+G ++ AYEFIK +PIQP   VWGA+ +AC  HG
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495

Query: 738 DTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
             ++G   AE LFKL+P++ G ++ LSN + A GRW +A
Sbjct: 496 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 231/509 (45%), Gaps = 23/509 (4%)

Query: 13  LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
           L+  YS + + ES+  +   T  ++VV+W ++I+   +N      L  F EM  EG+  +
Sbjct: 48  LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107

Query: 73  STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL-CNVFVNMYAKCGDLNSSECTF 131
             T      A+  +     G+ +H L++K G I D  + C+ F +MY K    + +   F
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAF-DMYCKTRLRDDARKLF 166

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
             +   +  +WN  +S  + +  P + +  F E        ++++  + + A +    L+
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226

Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
            G  +H L ++ G++    VSV N LI  Y +C  I ++E  F  M  K+ VSW +++  
Sbjct: 227 LGMQLHGLVLRSGFDTD--VSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284

Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
           +  N + E+A  +L+       VE     + +++S CA    L  GRS+H +A++  +  
Sbjct: 285 YVQNHEDEKA-SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343

Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
            + + ++L+D Y K   +  +E  F+ + P  +LV+ NS+I G            LF+EM
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEM-PEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402

Query: 360 LYL-CSQF-SFSTLLAILPSCNSPESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINC 416
               C    ++ T +++L +C+   ++E G  I    +   G        + ++ M    
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462

Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLV 475
           G +  A+  ++++      S W  +  AC  +G  Q  +   +++ +     S + V L 
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522

Query: 476 NVISACGN-LELAFEGKSLHGLALKSLMG 503
           N  +A G   E     + L G+ +K   G
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAG 551



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 198/456 (43%), Gaps = 28/456 (6%)

Query: 89  LKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
           ++ GRVVH   +K         L N  +NMY+K     S+          + VSW +++S
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81

Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
           G   N +    L+ F EM   G   ++ +   A  A A L     GK IHAL +K G   
Sbjct: 82  GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141

Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
             +V    S   MY +    + A + F  +  +++ +WNA I     +G+  EA +   E
Sbjct: 142 DVFVGC--SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE 199

Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
            + +    P+  T    ++ C+D L L  G  +HG  +R     D+ + N L+DFY K  
Sbjct: 200 FRRIDG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258

Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFK-------EMLYLCS-----QFSFSTLLAIL 375
            +  +E++F  +   N  VSW S+++   +        +LYL S     + S   + ++L
Sbjct: 259 QIRSSEIIFTEMGTKN-AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317

Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLLQRISHN 432
            +C     LE G+SIH   +K          +AL+ MY  CG   D   AF  +      
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP----E 373

Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVISACGNLELAFEGK 491
            +    N +I      G    A+  F+ M  +    +P+ +T V+++SAC        G 
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433

Query: 492 SLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSA 525
            +   +++S  G++   ++   ++ M GR   ++ A
Sbjct: 434 KIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 12  SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
           S    Y      + +  LF E   +++ TWNA I+  V +      +  F E        
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207

Query: 72  DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
           +S T    ++A +    L  G  +H L +++G   D S+CN  ++ Y KC  + SSE  F
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267

Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKC-LLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
           + M   + VSW ++++  + N+  EK  +LY R      E +D + +SS ++A A +  L
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFM-ISSVLSACAGMAGL 326

Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
             G+ IHA  +K   E + +V   ++L+ MY +CG IE +E+AF  M  K++V+ N++I 
Sbjct: 327 ELGRSIHAHAVKACVERTIFVG--SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIG 384

Query: 251 GFALNGKFEEAFDLLHEMQLMR-SVEPDIATVVTLISLCADSLLLREGRSV 300
           G+A  G+ + A  L  EM        P+  T V+L+S C+ +  +  G  +
Sbjct: 385 GYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 147/342 (42%), Gaps = 25/342 (7%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN----RCVVMG 57
           GF   +     L+  Y       SS  +F E   K+ V+W +++ A V+N    +  V+ 
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298

Query: 58  LHFFGEMVEEGIRFDSTTLLI--IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV 115
           L    ++VE      ++  +I  ++SA   M  L+ GR +H  ++KA +     + +  V
Sbjct: 299 LRSRKDIVE------TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALV 352

Query: 116 NMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS--GEQAD 173
           +MY KCG +  SE  F  M   + V+ N+++ G  H    +  L  F EM     G   +
Sbjct: 353 DMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPN 412

Query: 174 NVSLSSAVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
            ++  S ++A +  G +  G K+  ++    G E  P     + ++ M  + G +E A  
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE--PGAEHYSCIVDMLGRAGMVERAYE 470

Query: 233 AFWGMTCKDVVS-WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
               M  +  +S W A+ +   ++GK +    LL    L +    D    V L +  A +
Sbjct: 471 FIKKMPIQPTISVWGALQNACRMHGKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAAA 528

Query: 292 LLLREGRSVH----GYAIRRLLGYD-LLMMNSLMDFYSKSNS 328
               E  +V     G  I++  GY  + + N +  F +K  S
Sbjct: 529 GRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRS 570


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 179/618 (28%), Positives = 302/618 (48%), Gaps = 39/618 (6%)

Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
           H   IKLG    PY +  N+LI+ Y++C ++ +A + F  M  +D VSWNAII  FA +G
Sbjct: 16  HCRAIKLGSIADPYTA--NNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSG 73

Query: 257 KFEEAFDLLHEMQLMRSVEP-DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
             +  + LL  M+  RS    D  T  +++   A    L+ G+ +H   ++  L  ++  
Sbjct: 74  DLDTTWQLLGAMR--RSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFS 131

Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK----EMLYLC-------- 363
            ++L+D Y+K   +    ++F ++ P  + VSWN++++   +    +M +          
Sbjct: 132 GSALLDMYAKCGRVDDGYVVFQSM-PERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEG 190

Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
            +    T+  +L   ++    +    +HC  +K G        NA +  Y  C  L  A 
Sbjct: 191 VEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAE 250

Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
            +        D   WN ++ A   +     A K F  M Q     PD+ T   ++ AC  
Sbjct: 251 RVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDM-QNFGFEPDAYTYTGIVGACSV 309

Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD--IKSASTVFESCYNCNLCTWN 541
            E    GK LHGL +K  +     V NALI+MY R  D  ++ A  +F S    + CTWN
Sbjct: 310 QEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWN 369

Query: 542 CMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
            +++ + Q      AL LF   R L  E +  +  +++ +C+ L  L+ G+Q H     +
Sbjct: 370 SILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKV 429

Query: 599 GFQENSFISSALLDMYSNC--------------KSNA-AWSSMISAYGYHGKGWEAIELF 643
           GF  NS++ S+L+ MYS C              K NA  W+S+I  Y  HG+G  A++LF
Sbjct: 430 GFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLF 489

Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
           + M    ++    + +++L+ACSH+GLV+EG  +  +M  ++ + P  EH+ C +D+ GR
Sbjct: 490 YMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGR 549

Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
           +G L++A   ++ +P +P   V   +L AC   GD ++  Q+A++L +LEPE    Y+ L
Sbjct: 550 AGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVIL 609

Query: 764 SNMYVALGRWKDAVEIGK 781
           S MY     W +   + +
Sbjct: 610 SEMYGRFKMWGEKASVTR 627



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 295/651 (45%), Gaps = 49/651 (7%)

Query: 96  HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
           HC +IK G IAD    N  +  YAKC +LNS+   F  M   DTVSWN I+S    +   
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
           +        M  S    D+ +  S +   A +G+L  G+ +H++ +K+G  ++ +    +
Sbjct: 76  DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSG--S 133

Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
           +L+ MY++CG ++     F  M  ++ VSWN ++  ++  G  + AF +L  M+L   VE
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMEL-EGVE 192

Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
            D  TV  L++L  +++  +    +H   ++  L     + N+ +  YS+  SL  AE +
Sbjct: 193 IDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERV 252

Query: 336 FNAIAPMNDLVSWNSMISGL---------FKEMLYLCSQFSFS----TLLAILPSCNSPE 382
           F+      DLV+WNSM+            FK  L +   F F     T   I+ +C+  E
Sbjct: 253 FDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDM-QNFGFEPDAYTYTGIVGACSVQE 311

Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC-WNIV 441
               GK +H   +K G  N+    NAL+ MYI   D     +L    S +    C WN +
Sbjct: 312 HKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSI 371

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           +    Q G  ++A++ F  M +      D  T   VI +C +L     G+  H LALK  
Sbjct: 372 LAGYVQVGLSEDALRLFLQM-RCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVG 430

Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
              ++ V ++LI MY +C  I+ A   FE+    N   WN +I  ++Q+     AL+LF 
Sbjct: 431 FDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFY 490

Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
             +  + + + I+ V++L+AC+  G++  G               +FI S   D +    
Sbjct: 491 MMKERKVKLDHITFVAVLTACSHNGLVEEG--------------CNFIESMESD-FGIPP 535

Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYY 678
               ++  I  YG  G   +A  L   M      P    + +LL AC   G ++   Q  
Sbjct: 536 RQEHYACAIDLYGRAGHLKKATALVETM---PFEPDAMVLKTLLGACRFCGDIELASQIA 592

Query: 679 NNMLEEYDVRPETEH--HVCIVDMLGRS---GKLQEAYEFIKNLPIQPKPG 724
             +LE   + PE EH  +V + +M GR    G+       ++   ++  PG
Sbjct: 593 KILLE---LEPE-EHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPG 639



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 173/711 (24%), Positives = 327/711 (45%), Gaps = 76/711 (10%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G +A   T+ +L+T+Y+  +   S+  +F E  ++D V+WNA+I+A   +  +       
Sbjct: 23  GSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLL 82

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
           G M      FDS T   I+  +  +  LK G+ +H + +K G+  +    +  ++MYAKC
Sbjct: 83  GAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKC 142

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS-- 179
           G ++     F  M   + VSWNT+++        +        M   G + D+ ++S   
Sbjct: 143 GRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLL 202

Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG-MT 238
            +  +A   +L+    +H   +K G E   + +V N+ I+ YS+C  ++ AER F G + 
Sbjct: 203 TLLDNAMFYKLTMQ--LHCKIVKHGLE--LFNTVCNATITAYSECCSLQDAERVFDGAVL 258

Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
           C+D+V+WN+++  + ++ K + AF +  +MQ     EPD  T   ++  C+       G+
Sbjct: 259 CRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNF-GFEPDAYTYTGIVGACSVQEHKTCGK 317

Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNS--LSKAELLFNAIAPMNDLVSWNSMISG-- 354
            +HG  I+R L   + + N+L+  Y + N   +  A  +F ++  + D  +WNS+++G  
Sbjct: 318 CLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSM-DLKDCCTWNSILAGYV 376

Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
                     LF +M  L  +    T  A++ SC+   +L+ G+  H   LK+GF  N+ 
Sbjct: 377 QVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSY 436

Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
             ++L+ MY  CG +  A    +  S + +   WN +I    Q+G    A+  F  M ++
Sbjct: 437 VGSSLIFMYSKCGIIEDARKSFEATSKD-NAIVWNSIIFGYAQHGQGNIALDLF-YMMKE 494

Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDI 522
           +    D +T V V++AC +  L  EG +    +++S  G+  R ++    I +YGR   +
Sbjct: 495 RKVKLDHITFVAVLTACSHNGLVEEGCNFIE-SMESDFGIPPRQEHYACAIDLYGRAGHL 553

Query: 523 KSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQL 582
           K A+ + E+                               + FEP+ + + ++L AC   
Sbjct: 554 KKATALVET-------------------------------MPFEPDAMVLKTLLGACRFC 582

Query: 583 GVLRHGKQIHGHVFHLGFQEN-SFISSALLDMYSNCK---SNAAWSSMISAYGYHG-KGW 637
           G +    QI   +  L  +E+ +++   L +MY   K     A+ + M+   G     GW
Sbjct: 583 GDIELASQIAKILLELEPEEHCTYV--ILSEMYGRFKMWGEKASVTRMMRERGVKKVPGW 640

Query: 638 EAIELFHEM----CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE 684
             IE+ + +          P    +  LL        ++EG++ ++N +++
Sbjct: 641 SWIEVKNNVHAFNAEDHSHPQCEEIYILLQQ------LNEGIKLFDNFVDQ 685


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 267/494 (54%), Gaps = 34/494 (6%)

Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQFSF---- 368
            L+  Y++   +  A  +F+  +P   + +WN+MI      G   E L L  + +     
Sbjct: 44  KLIQSYARLGHIESARQVFDK-SPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVR 102

Query: 369 ---STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
              ST   +L +C     L  G+      +  G+ ++     A++++Y  CG +  A  +
Sbjct: 103 PDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRV 162

Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
             ++    D  CW  +I    QNG  +EA+  ++ M  ++    D V ++ +I AC  L 
Sbjct: 163 FDKMGRR-DLVCWTTMITGLAQNGQAREAVDIYRQM-HKKRVEGDGVVMLGLIQACTTLG 220

Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
            +  G S+HG  ++  + +D  VQ +L+ MY +   ++ AS VF      N+ +W+ +IS
Sbjct: 221 HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALIS 280

Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
            F+QN     AL+L   ++   ++P+ +S+VS+L AC+Q+G L+ GK +HG++       
Sbjct: 281 GFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHF 339

Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
           +   S+A++DMYS C               + + +W+++I++YG HG G EA+ LF +M 
Sbjct: 340 DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMR 399

Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
            + ++P  ++  SLLSA SHSGLV++G  +++ M+ EY ++P  +H+ C+VD+L R+G++
Sbjct: 400 ETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRV 459

Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
           +EA E I+++  +P   +W A+LS C +HG   +G+  A+ + +L P++ G Y  +SN +
Sbjct: 460 EEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFF 519

Query: 768 VALGRWKDAVEIGK 781
               RW +  E+ K
Sbjct: 520 ATARRWDEVAEVRK 533



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 228/490 (46%), Gaps = 22/490 (4%)

Query: 2   GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
           G   H  ++  L+ +Y+ + + ES+  +F ++    V  WNAMI A      +   L  +
Sbjct: 34  GIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLY 93

Query: 62  GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
             M  EG+R DS+T  +++ A T+   L+ G      ++  G   D  +    +N+YAKC
Sbjct: 94  HRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKC 153

Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
           G ++ +   F  M   D V W T+++G   N    + +  +R+M     + D V +   +
Sbjct: 154 GKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLI 213

Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
            A   LG    G  IH   I+   +    V V  SL+ MY++ G +E A   F  M  K+
Sbjct: 214 QACTTLGHSKMGLSIHGYMIR--KDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKN 271

Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
           V+SW+A+I GFA NG    A  L+ +MQ     +PD  ++V+++  C+    L+ G+SVH
Sbjct: 272 VISWSALISGFAQNGFAGNALQLVVDMQSF-GYKPDSVSLVSVLLACSQVGFLKLGKSVH 330

Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
           GY +RR L +D +   +++D YSK  SLS A  +F+ I+   D +SWN++I+     G  
Sbjct: 331 GYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQIS-FRDSISWNAIIASYGIHGSG 388

Query: 357 KEMLYLCSQF----------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
           +E L L  Q           +F++LL+        E   +  SI   + K+  S      
Sbjct: 389 EEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYA- 447

Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
             ++ +    G +  A  L++ +      + W  ++  C  +G F       K + +   
Sbjct: 448 -CMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNP 506

Query: 467 ASPDSVTLVN 476
             P   +LV+
Sbjct: 507 DDPGIYSLVS 516



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 237/504 (47%), Gaps = 34/504 (6%)

Query: 95  VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNY 154
           +H L I  G+    +     +  YA+ G + S+   F         +WN ++        
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85

Query: 155 PEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVT 214
             + L  +  M   G + D+ + +  + A     +L  G+      +  GY D  +V   
Sbjct: 86  MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA- 144

Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSV 274
            +++++Y++CG ++ A R F  M  +D+V W  +I G A NG+  EA D+  +M   R V
Sbjct: 145 -AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR-V 202

Query: 275 EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAEL 334
           E D   ++ LI  C      + G S+HGY IR+ +  D+++  SL+D Y+K+  L  A  
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262

Query: 335 LFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPE 382
           +F  +   N ++SW+++ISG  +        +++     F +     +L+++L +C+   
Sbjct: 263 VFRRMLYKN-VISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321

Query: 383 SLEFGKSIHCWQL-KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
            L+ GKS+H + + +L F  + +   A++ MY  CG L  A ++  +IS   D+  WN +
Sbjct: 322 FLKLGKSVHGYIVRRLHF--DCVSSTAVIDMYSKCGSLSFARTVFDQISFR-DSISWNAI 378

Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
           I +   +G  +EA+  F  M ++ N  PD  T  +++SA  +  L  +G+        S+
Sbjct: 379 IASYGIHGSGEEALSLFLQM-RETNVKPDHATFASLLSAFSHSGLVEKGRYWF-----SI 432

Query: 502 MGLDTRVQNA------LITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISA-FSQNKAE 553
           M  + ++Q +      ++ +  R   ++ A  + ES      +  W  ++S   +  K  
Sbjct: 433 MVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFL 492

Query: 554 VRALELFRHLEFEPNEISIVSILS 577
           +  +   + LE  P++  I S++S
Sbjct: 493 IGEMAAKKVLELNPDDPGIYSLVS 516


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.134    0.410 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,545,954,946
Number of Sequences: 23463169
Number of extensions: 452432368
Number of successful extensions: 1335105
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6678
Number of HSP's successfully gapped in prelim test: 3544
Number of HSP's that attempted gapping in prelim test: 1086153
Number of HSP's gapped (non-prelim): 73449
length of query: 781
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 630
effective length of database: 8,816,256,848
effective search space: 5554241814240
effective search space used: 5554241814240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)