BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035828
(781 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/811 (50%), Positives = 554/811 (68%), Gaps = 32/811 (3%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G L L TS+ LLT Y SS LF E KDV+ WN+MITA +N + + F
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
EM+ +G FDSTTLL+ SAL+ ++ ++ ++HCL+I+ G++ DSSLCN +N+YAK
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
+L+S+EC F+ M D VSWNTIM+ CL N +P K L YF+ M SG++AD V+ S +
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
+A + + EL+ G+ +H L IK GY +VSV NS+ISMYS+CGD EAAE F + C+D
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
V+S NAI++GFA NG FEEAF +L++MQ + ++PDIATVV++ S+C D REGR+VH
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 302 GYAIR-RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
GY +R + L ++NS++D Y K ++AELLF DLVSWNSMIS
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT-TTHRDLVSWNSMISAFSQNGF 475
Query: 355 ------LFKEML--YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
LFKE++ Y CS+FS ST+LAIL SC+S +SL FGKS+HCW KLGF +N +
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSA 535
Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
N++++MYI C DL +AF L+ +S D + WN VI C +GH E+++ F++M+++
Sbjct: 536 NSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 595
Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
D +TL+ ISA GNL L +G+ HGLA+KSL LDT++QN LITMYGRC+DI+SA
Sbjct: 596 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 655
Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
VF + NLC+WNC+ISA SQNKA +LFR+L+ EPNEI+ V +LSA TQLG
Sbjct: 656 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTS 715
Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
+G Q H H+ GFQ N F+S+AL+DMYS+C S +AW+S+ISA+G
Sbjct: 716 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 775
Query: 632 YHGKGWEAIELFHEM-CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
+HG G +A+ELF E+ NS + P KSS ISLLSACSHSG +DEGL YY M E++ V+P
Sbjct: 776 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 835
Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF 750
TEH V IVDMLGR+GKL+EAYEFI + K GVWGA+LSAC++HGDTK+GK+VAE+LF
Sbjct: 836 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 895
Query: 751 KLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
++EP+N YYISL+N YV LG W++AV + K
Sbjct: 896 EMEPDNASYYISLANTYVGLGGWEEAVRLRK 926
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 183/717 (25%), Positives = 333/717 (46%), Gaps = 63/717 (8%)
Query: 93 RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
R VHC ++K G++ D + + + Y + G+L SS C F + D + WN++++ N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVS 212
+ F EM G + D+ +L A +A + L ++H L I+ G S
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS--S 224
Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
+ N+L+++Y++ ++ +AE F M +D+VSWN I+ NG ++ M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT-GS 283
Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYD----LLMMNSLMDFYSKSNS 328
E D T +IS C+ L G S+HG I+ GY + + NS++ YSK
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKS--GYSPEAHVSVGNSIISMYSKCGD 341
Query: 329 LSKAELLFNAIAPMNDLVSWNSMI-----SGLFKEMLYLCSQF--------SFSTLLAIL 375
AE +F + D++S N+++ +G+F+E + +Q +T+++I
Sbjct: 342 TEAAETVFEELV-CRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSD 434
C G+++H + +++ + + V N+++ MY CG L LL + + + D
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG-LTTQAELLFKTTTHRD 459
Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV-TLVNVISACGNLELAFEGKSL 493
WN +I A +QNG +A FK + + + S S+ T++ ++++C + + GKS+
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC-NLCTWNCMISAFSQNKA 552
H K G + N++I MY CRD+ SA E+ +L +WN +IS + +
Sbjct: 520 HCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 579
Query: 553 EVRALELFRHLEFEP----NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
+ +L F+ + E + I+++ +SA LG++ G+ HG + ++ + +
Sbjct: 580 HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQN 639
Query: 609 ALLDMYSNCKSNA---------------AWSSMISAYGYHGKGWEAIELFHEMCNSGIRP 653
L+ MY CK +W+ +ISA + G E +LF N + P
Sbjct: 640 TLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR---NLKLEP 696
Query: 654 TKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYE 712
+ + + LLSA + G G+Q + +++ + P +VDM G L+ +
Sbjct: 697 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMK 754
Query: 713 FIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL------EPENVGYYISL 763
+N + W +++SA HG MG++ EL +L EP N +ISL
Sbjct: 755 VFRNSGVN-SISAWNSVISAHGFHG---MGEKAMELFKELSSNSEMEP-NKSSFISL 806
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 186/405 (45%), Gaps = 34/405 (8%)
Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
SF L +L S E +S+HC+ LK G + + L+ Y G+LV++ L
Sbjct: 86 SFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLF 145
Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
+ D WN +I A QNG + A+ F M + N DS TL+ SA +L L
Sbjct: 146 DELKEK-DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN-EFDSTTLLLAASALSSLHL 203
Query: 487 AFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISA 546
+ + LH LA+++ + D+ + NAL+ +Y + ++ SA VF + ++ +WN +++
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 547 FSQNKAEVRALELFRHLEFEPNEISIVS---ILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
N ++L+ F+ + E V+ ++SAC+ + L G+ +HG V G+
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 604 SFIS--SALLDMYSNCKSNAAW---------------SSMISAYGYHGKGWEAIELFHEM 646
+ +S ++++ MYS C A +++++ + +G EA + ++M
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 647 CN-SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV-----CIVDM 700
+ I+P ++V+S+ S C EG + Y VR E + ++DM
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHG-----YTVRMEMQSRALEVINSVIDM 438
Query: 701 LGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
G+ G +A E + W +M+SA S +G T K +
Sbjct: 439 YGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/754 (30%), Positives = 386/754 (51%), Gaps = 90/754 (11%)
Query: 87 NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD----------------------- 123
C G+V+H ++ GM +D+ LCN +++Y +CGD
Sbjct: 20 RCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFL 79
Query: 124 --------LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV 175
L + F GM D VSWN ++S + + EK L+ ++ M G
Sbjct: 80 TFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139
Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAF 234
+L+S ++A + + + +G H + +K G + + +V N+L+SMY++CG I + R F
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVG--NALLSMYAKCGFIVDYGVRVF 197
Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA----- 289
++ + VS+ A+I G A K EA + M + V+ D + ++S+ A
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM-CEKGVQVDSVCLSNILSISAPREGC 256
Query: 290 DSLLL----REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDL 345
DSL G+ +H A+R G DL + NSL++ Y+K+ ++ AEL+F A P ++
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF-AEMPEVNV 315
Query: 346 VSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
VSWN MI G +E S +S+EF + GF N +
Sbjct: 316 VSWNIMIVGFGQEY-------------------RSDKSVEFLTRMR----DSGFQPNEVT 352
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
+++ GD+ + I S S WN ++ + H++EAI F+ M Q Q
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPS-VSAWNAMLSGYSNYEHYEEAISNFRQM-QFQ 410
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
N PD TL ++S+C L GK +HG+ +++ + ++ + + LI +Y C ++ +
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEIS 470
Query: 526 STVFESCYN-CNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACT 580
+F+ C N ++ WN MIS F N + +AL LFR + PNE S ++LS+C+
Sbjct: 471 ECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Query: 581 QLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSS 625
+L L HG+Q HG V G+ +SF+ +AL DMY C K+ W+
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 626 MISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEY 685
MI YG++G+G EA+ L+ +M +SG +P + +S+L+ACSHSGLV+ GL+ ++M +
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 686 DVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
+ PE +H++CIVD LGR+G+L++A + + P + +W +LS+C HGD + ++V
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710
Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
AE L +L+P++ Y+ LSN Y +L +W D+ +
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAAL 744
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 160/605 (26%), Positives = 273/605 (45%), Gaps = 64/605 (10%)
Query: 12 SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
+ LT V + +F +DVV+WN MI+ V L + MV +G
Sbjct: 77 AFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136
Query: 72 DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL-NSSECT 130
TL ++SA +++ G H +++K G+ + + N ++MYAKCG + +
Sbjct: 137 SRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRV 196
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA----- 185
F + + VS+ ++ G N + + FR M G Q D+V LS+ ++ SA
Sbjct: 197 FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGC 256
Query: 186 -CLGEL---SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
L E+ GK IH L ++LG+ +++ NSL+ +Y++ D+ AE F M +
Sbjct: 257 DSLSEIYGNELGKQIHCLALRLGFGGDLHLN--NSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
VVSWN +I GF + +++ + L M+ +P+ T ++++ C S + GR +
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLGACFRSGDVETGRRI- 372
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------ 355
F++I P + +WN+M+SG
Sbjct: 373 ----------------------------------FSSI-PQPSVSAWNAMLSGYSNYEHY 397
Query: 356 ------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
F++M + + +TL IL SC LE GK IH ++ S N+ V+ L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ +Y C + + + + D +CWN +I N +A+ F+ M Q P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
+ + V+S+C L G+ HGL +KS D+ V+ AL MY +C +I SA F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLR 586
++ N WN MI + N A+ L+R + +P+ I+ VS+L+AC+ G++
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 587 HGKQI 591
G +I
Sbjct: 638 TGLEI 642
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 8/356 (2%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + T S+L A E+ +F V WNAM++ + F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M + ++ D TTL +I+S+ ++ L+ G+ +H + I+ + +S + + + +Y++C
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSEC 464
Query: 122 GDLNSSECTFSG-MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADN-VSLSS 179
+ SEC F ++ D WN+++SG HN K L+ FR M + N S ++
Sbjct: 465 EKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+++ + L L +G+ H L +K GY +V +L MY +CG+I++A + F +
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVE--TALTDMYCKCGEIDSARQFFDAVLR 582
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
K+ V WN +I G+ NG+ +EA L +M + +PD T V++++ C+ S L+ G
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKM-ISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 300 VHGYAIRRLLGYDLLMMN--SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
+ +++R+ G + + + ++D ++ L AE L A + V W ++S
Sbjct: 642 ILS-SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 200/500 (40%), Gaps = 65/500 (13%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF L + SLL Y+ + +F E +VV+WN MI + + F
Sbjct: 279 GFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFL 338
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M + G + + T + ++ A C +
Sbjct: 339 TRMRDSGFQPNEVTCISVLGA-----CFRS------------------------------ 363
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
GD+ + FS + +WN ++SG + + E+ + FR+M + + D +LS +
Sbjct: 364 GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
++ A L L GK IH G+ + E S + + LI++YS+C +E +E F +
Sbjct: 424 SSCARLRFLEGGKQIH--GVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
D+ WN++I GF N +A L M + P+ + T++S C+ L GR
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------- 353
HG ++ D + +L D Y K + A F+A+ N ++ WN MI
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI-WNEMIHGYGHNGR 600
Query: 354 -----GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
GL+++M+ + T +++L +C+ +E G I L G+
Sbjct: 601 GDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI------LSSMQRIHGIEP 654
Query: 409 LMHMYI-------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KS 460
+ YI G L A L + + S + W I++ +C +G A + K
Sbjct: 655 ELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
Query: 461 MTQQQNASPDSVTLVNVISA 480
M +S V L N S+
Sbjct: 715 MRLDPQSSAAYVLLSNTYSS 734
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/794 (29%), Positives = 398/794 (50%), Gaps = 52/794 (6%)
Query: 26 SLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSAL-- 83
+ +F E + + TWN MI + F MV E + + T ++ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 84 --TQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS 141
+ ++Q +H + G+ + +CN +++Y++ G ++ + F G+ D S
Sbjct: 199 GSVAFDVVEQ---IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
W ++SG N + + F +M G + SS ++A + L G+ +H L +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 202 KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEA 261
KLG+ YV N+L+S+Y G++ +AE F M+ +D V++N +I+G + G E+A
Sbjct: 316 KLGFSSDTYV--CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 262 FDLLHEMQLMRSVEPDIATVVTLISLC-ADSLLLREGRSVHGYAIRRLLGYDLLMMNSLM 320
+L M L +EPD T+ +L+ C AD L R G+ +H Y + + + +L+
Sbjct: 374 MELFKRMHL-DGLEPDSNTLASLVVACSADGTLFR-GQQLHAYTTKLGFASNNKIEGALL 431
Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY---LCSQ 365
+ Y+K + A L + + ++V WN M+ +F++M + +Q
Sbjct: 432 NLYAKCADIETA-LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
+++ + IL +C LE G+ IH +K F N + L+ MY G L A+ +
Sbjct: 491 YTYPS---ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
L R + D W +I TQ +A+ TF+ M + S D V L N +SAC L+
Sbjct: 548 LIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS-DEVGLTNAVSACAGLQ 605
Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
EG+ +H A S D QNAL+T+Y RC I+ + FE + WN ++S
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Query: 546 AFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
F Q+ AL +F + E N + S + A ++ ++ GKQ+H + G+
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
+ + +AL+ MY+ C K+ +W+++I+AY HG G EA++ F +M
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
+S +RP +++ +LSACSH GLVD+G+ Y+ +M EY + P+ EH+VC+VDML R+G L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
A EFI+ +PI+P VW +LSAC H + ++G+ A L +LEPE+ Y+ LSN+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 768 VALGRWKDAVEIGK 781
+W DA ++ +
Sbjct: 906 AVSKKW-DARDLTR 918
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 182/709 (25%), Positives = 322/709 (45%), Gaps = 52/709 (7%)
Query: 67 EGIRFDSTTLLIIVSALTQMN-CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
GIR + TL ++ + N L +GR +H +K G+ ++ L + Y GDL
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
+ F M +WN ++ N + F M S N S V +
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGVLEAC 196
Query: 186 CLGELSYGKV--IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
G +++ V IHA + G DS V N LI +YS+ G ++ A R F G+ KD
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDS--TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
SW A+I G + N EA L +M ++ + P +++S C L G +HG
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
++ D + N+L+ Y +L AE +F+ ++ D V++N++I+G
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGLSQCGYGEK 372
Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
LFK M + +TL +++ +C++ +L G+ +H + KLGF++N AL++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
+Y C D+ A + + WN+++VA + + + F+ M Q + P+
Sbjct: 433 LYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQ 490
Query: 472 VTLVNVISAC---GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
T +++ C G+LEL G+ +H +K+ L+ V + LI MY + + +A +
Sbjct: 491 YTYPSILKTCIRLGDLEL---GEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVL 585
++ +W MI+ ++Q + +AL FR + +E+ + + +SAC L L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAY 630
+ G+QIH GF + +AL+ +YS C N AW++++S +
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRP 689
G EA+ +F M GI + S + A S + + +G Q + + + YD
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD--S 725
Query: 690 ETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGV-WGAMLSACSHHG 737
ETE ++ M + G + +A + + L + K V W A+++A S HG
Sbjct: 726 ETEVCNALISMYAKCGSISDAEK--QFLEVSTKNEVSWNAIINAYSKHG 772
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 161/701 (22%), Positives = 301/701 (42%), Gaps = 75/701 (10%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + +L++ Y ++ S+ +F +D VT+N +I + + F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M +G+ DS TL +V A + L +G+ +H + K G +++ + +N+YAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
D+ ++ F + V WN ++ + FR+M + + S +
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
LG+L G+ IH+ IK ++ + Y V + LI MY++ G ++ A KD
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAY--VCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
VVSW +I G+ ++A +M L R + D + +S CA L+EG+ +H
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
A DL N+L+ YS+ + ++ L F D ++WN+++SG +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQSGNN 673
Query: 358 -EMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
E L + + + T + + + + +++ GK +H K G+ + T NAL
Sbjct: 674 EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ MY CG + A +S ++ S WN +I A +++G EA+ +F M N P
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHGFGSEALDSFDQMI-HSNVRP 791
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
+ VTLV V+SAC ++ L +G + + ++ S GL + ++
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIA-YFESMNSEYGLSPKPEH------------------- 831
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
+ C++ ++ RA E + + +P+ + ++LSAC
Sbjct: 832 ----------YVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC---------- 871
Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE-MCN 648
V H + F + LL++ ++A ++S K W+A +L + M
Sbjct: 872 -----VVHKNMEIGEFAAHHLLELEP---EDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 649 SGIRP--------TKSSVISLLSACSHSGLVDEGLQYYNNM 681
G++ K+S+ S + L DE +Y+ ++
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 202/464 (43%), Gaps = 56/464 (12%)
Query: 370 TLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQR 428
TL +L C + SL+ G+ +H LKLG +N L Y+ GDL AF +
Sbjct: 86 TLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDE 145
Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
+ + WN +I E F M +N +P+ T V+ AC +AF
Sbjct: 146 MPERT-IFTWNKMIKELASRNLIGEVFGLFVRMV-SENVTPNEGTFSGVLEACRGGSVAF 203
Query: 489 E-GKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
+ + +H L + T V N LI +Y R + A VF+ + +W MIS
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 548 SQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
S+N+ E A+ LF L P + S+LSAC ++ L G+Q+HG V LGF ++
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 605 FISSALLDMY-------------SNCKSNAA--WSSMISAYGYHGKGWEAIELFHEMCNS 649
++ +AL+ +Y SN A ++++I+ G G +A+ELF M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYY----------NNMLE---------------- 683
G+ P +++ SL+ ACS G + G Q + NN +E
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 684 -EYDVRPETEHHVCIVDML---GRSGKLQEAYEFIKNLPIQ---PKPGVWGAMLSACSHH 736
+Y + E E+ V ML G L+ ++ + + I+ P + ++L C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 737 GDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
GD ++G+Q+ + K + Y S L +MY LG+ A +I
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 246/807 (30%), Positives = 397/807 (49%), Gaps = 49/807 (6%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
+ SLL+ YSN + LF DVV+ N MI+ ++R L FF +M G
Sbjct: 87 TKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGF 146
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
+ + ++SA + + +V C +IK G + + +++++K +
Sbjct: 147 EANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYK 206
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
F A+ WNTI++G L N F EM ++ D+ + SS +AA A L +
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
L +GKV+ A IK G ED V V +++ +Y++CG + A F + VVSW ++
Sbjct: 267 LRFGKVVQARVIKCGAED---VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 250 DGFALNGKFEEAFDLLHEMQLMR--SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
G+ K +AF L + MR VE + TV ++IS C ++ E VH + +
Sbjct: 324 SGYT---KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
D + +L+ YSKS + +E +F + + N MI+ L
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRL 440
Query: 356 FKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
F ML +FS +LL++L + L GK +H + LK G + ++L +
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVL------DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTL 494
Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
Y CG L ++ L Q I D +CW +I + G+ +EAI F M SPD
Sbjct: 495 YSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYLREAIGLFSEMLDD-GTSPDES 552
Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
TL V++ C + GK +HG L++ + + +AL+ MY +C +K A V++
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGK 589
+ + + +IS +SQ+ LFR + F + +I SIL A G
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGA 672
Query: 590 QIHGHVFHLGFQENSFISSALLDMYSN-------CKSNA--------AWSSMISAYGYHG 634
Q+H ++ +G + S+LL MYS CK+ + AW+++I++Y HG
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
K EA+++++ M G +P K + + +LSACSH GLV+E + N+M+++Y + PE H+
Sbjct: 733 KANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHY 792
Query: 695 VCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
VC+VD LGRSG+L+EA FI N+ I+P VWG +L+AC HG+ ++GK A+ +LEP
Sbjct: 793 VCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEP 852
Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
+ G YISLSN+ +G W + E K
Sbjct: 853 SDAGAYISLSNILAEVGEWDEVEETRK 879
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 210/751 (27%), Positives = 352/751 (46%), Gaps = 58/751 (7%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G+ + ++L+ +S FE + +F ++ + +V WN +I + N+ F
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
EM + DS T +++A + L+ G+VV IK G D +C V++YAKC
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKC 298
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G + + FS + VSW ++SG +N L F+EM SG + +N +++S +
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 182 AASACLGELSYGKVIHALGIKLG-YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM--- 237
+A + +HA K G Y DS SV +LISMYS+ GDI+ +E+ F +
Sbjct: 359 SACGRPSMVCEASQVHAWVFKSGFYLDS---SVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
+++V N +I F+ + K +A L M L + D +V +L+S+ D L L G
Sbjct: 416 QRQNIV--NVMITSFSQSKKPGKAIRLFTRM-LQEGLRTDEFSVCSLLSVL-DCLNL--G 469
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---- 353
+ VHGY ++ L DL + +SL YSK SL ++ LF I P D W SMIS
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGI-PFKDNACWASMISGFNE 528
Query: 354 --------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
GLF EML + STL A+L C+S SL GK IH + L+ G
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
+AL++MY CG L A + R+ SC ++ I +Q+G Q+ F+ M
Sbjct: 589 GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL-ISGYSQHGLIQDGFLLFRDMV-MS 646
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
+ DS + +++ A + + G +H K + + V ++L+TMY + I
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
F +L W +I++++Q+ AL+++ ++ F+P++++ V +LSAC+
Sbjct: 707 CKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-- 764
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
HG + FHL NS + Y N + M+ A G G+ EA
Sbjct: 765 ----HGGLVEESYFHL----NSMVKD-----YGIEPENRHYVCMVDALGRSGRLREAESF 811
Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDML 701
+ M I+P +LL+AC G V+ G +E + P + ++ + ++L
Sbjct: 812 INNM---HIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE---LEPSDAGAYISLSNIL 865
Query: 702 GRSG---KLQEAYEFIKNLPIQPKPGVWGAM 729
G +++E + +K +Q +PG W ++
Sbjct: 866 AEVGEWDEVEETRKLMKGTGVQKEPG-WSSV 895
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 265/565 (46%), Gaps = 45/565 (7%)
Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
V +T SL+S YS G + A + F + DVVS N +I G+ + FEE+ +M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 271 MRSVEPDIATVVTLISLCA--DSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
+ E + + ++IS C+ + L E H I+ + ++ ++L+D +SK+
Sbjct: 144 L-GFEANEISYGSVISACSALQAPLFSELVCCH--TIKMGYFFYEVVESALIDVFSKNLR 200
Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
A +F N + WN++I+G LF EM + T ++L
Sbjct: 201 FEDAYKVFRDSLSAN-VYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
+C S E L FGK + +K G + + A++ +Y CG + A + RI + S S
Sbjct: 260 ACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL 496
W +++ T++ A++ FK M + ++ T+ +VISACG + E +H
Sbjct: 319 -WTVMLSGYTKSNDAFSALEIFKEM-RHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 497 ALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW-NCMISAFSQNKAEVR 555
KS LD+ V ALI+MY + DI + VFE + N MI++FSQ+K +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK 436
Query: 556 ALELF-RHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLD 612
A+ LF R L+ +E S+ S+LS L L GKQ+HG+ G + + S+L
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 613 MYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
+YS C K NA W+SMIS + +G EAI LF EM + G P +S+
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
+ ++L+ CS + G + + L + + +V+M + G L+ A + L
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 718 PIQPKPGVWGAMLSACSHHGDTKMG 742
P + P +++S S HG + G
Sbjct: 613 P-ELDPVSCSSLISGYSQHGLIQDG 636
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 228/478 (47%), Gaps = 45/478 (9%)
Query: 294 LREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
LR + + + +RR LL +D+ + SL+ +YS S S++ A LF+ I P D+VS N MI
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTI-PQPDVVSCNIMI 122
Query: 353 SG-----LFKEMLYLCSQFSFSTLLA-------ILPSCNSPESLEFGKSIHCWQLKLGFS 400
SG LF+E L S+ F A ++ +C++ ++ F + + C +K+G+
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
+ +AL+ ++ A+ + R S +++ CWN +I +N ++ F
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVF-RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
M PDS T +V++AC +LE GK + +K D V A++ +Y +C
Sbjct: 242 MCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVIKC-GAEDVFVCTAIVDLYAKCG 299
Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILS 577
+ A VF N ++ +W M+S ++++ ALE+F RH E N ++ S++S
Sbjct: 300 HMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVIS 359
Query: 578 ACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS----------------NCKSNA 621
AC + ++ Q+H VF GF +S +++AL+ MYS + +
Sbjct: 360 ACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA--CSHSGLVDEGLQYYN 679
+ MI+++ K +AI LF M G+R + SV SLLS C + G G +
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 680 NMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
++ + V + + + G L+E+Y+ + +P + W +M+S + +G
Sbjct: 480 GLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/746 (30%), Positives = 394/746 (52%), Gaps = 49/746 (6%)
Query: 75 TLLIIVSALTQMNCLKQGRVVHCL-SIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSG 133
L +++ A + ++ GR +H L S + D LC + MYA CG + S F
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQ-ADNVSLSSAVAASACLGELSY 192
+ + WN ++S N ++ L F EM + + D+ + + A A + ++
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 193 GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGF 252
G +H L +K G + +V N+L+S Y G + A + F M +++VSWN++I F
Sbjct: 206 GLAVHGLVVKTGLVEDVFVG--NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVF 263
Query: 253 ALNGKFEEAFDLLHEMQLMR---SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
+ NG EE+F LL EM + PD+AT+VT++ +CA + G+ VHG+A++ L
Sbjct: 264 SDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRL 323
Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFK 357
+L++ N+LMD YSK ++ A+++F N +VSWN+M+ G + +
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN-VVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 358 EMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
+ML T+L +P C L K +HC+ LK F N + NA + Y
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 416 CGDLVAAFSLLQRISH---NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
CG L S QR+ H + + WN +I Q+ + ++ M + PDS
Sbjct: 443 CGSL----SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM-KISGLLPDSF 497
Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
T+ +++SAC L+ GK +HG +++ + D V +++++Y C ++ + +F++
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVLRHGK 589
+ +L +WN +I+ + QN RAL +FR + + IS++ + AC+ L LR G+
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHG 634
+ H + ++++FI+ +L+DMY+ KS A+W++MI YG HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHH 694
EAI+LF EM +G P + + +L+AC+HSGL+ EGL+Y + M + ++P +H+
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 695 VCIVDMLGRSGKLQEAYEFI-KNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE 753
C++DMLGR+G+L +A + + + + G+W ++LS+C H + +MG++VA LF+LE
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 754 PENVGYYISLSNMYVALGRWKDAVEI 779
PE Y+ LSN+Y LG+W+D ++
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKV 823
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 185/721 (25%), Positives = 324/721 (44%), Gaps = 47/721 (6%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE-GI 69
T ++T Y+ + S +F +K++ WNA+I++ N L F EM+ +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
D T ++ A M+ + G VH L +K G++ D + N V+ Y G + +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM----GWSGEQADNVSLSSAVAASA 185
F M + VSWN+++ N + E+ L EM G D +L + + A
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
E+ GK +H +KL + + + N+L+ MYS+CG I A+ F K+VVSW
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKE--LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 246 NAIIDGFALNGKFEEAFDLLHEMQL-MRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
N ++ GF+ G FD+L +M V+ D T++ + +C L + +H Y+
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
+++ Y+ L+ N+ + Y+K SLS A+ +F+ I + SWN++I G + S
Sbjct: 422 LKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLS 480
Query: 365 -----QFSFSTLL-------AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHM 412
Q S LL ++L +C+ +SL GK +H + ++ + +++ +
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 413 YINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
YI+CG+L +L + S S WN VI QNG A+ F+ M +
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVS-WNTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGI 598
Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
+++ V AC L G+ H ALK L+ D + +LI MY + I +S VF
Sbjct: 599 SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGK 589
+ +WN MI + + A++LF ++ P++++ + +L+AC G+
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL----- 713
Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI-ELFHEMCN 648
IH + +L ++SF + N K A M+ G K + E E +
Sbjct: 714 -IHEGLRYLDQMKSSF------GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766
Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
GI SLLS+C ++ G + + E +P E++V + ++ GK +
Sbjct: 767 VGIWK------SLLSSCRIHQNLEMGEKVAAKLFELEPEKP--ENYVLLSNLYAGLGKWE 818
Query: 709 E 709
+
Sbjct: 819 D 819
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 166/605 (27%), Positives = 287/605 (47%), Gaps = 42/605 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G + + +L++ Y + +L LF +++V+WN+MI +N
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 62 GEMVEE----GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
GEM+EE D TL+ ++ + + G+ VH ++K + + L N ++M
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNV 175
Y+KCG + +++ F + + VSWNT++ G R+M GE +AD V
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 176 SLSSAVAASACLGE--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
++ +AV C E L K +H +K + + V+ N+ ++ Y++CG + A+R
Sbjct: 397 TILNAVP--VCFHESFLPSLKELHCYSLKQEFVYNELVA--NAFVASYAKCGSLSYAQRV 452
Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL 293
F G+ K V SWNA+I G A + + D +M++ + PD TV +L+S C+
Sbjct: 453 FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKS 511
Query: 294 LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS 353
LR G+ VHG+ IR L DL + S++ Y L + LF+A+ LVSWN++I+
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED-KSLVSWNTVIT 570
Query: 354 ------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
G+F++M+ Q +++ + +C+ SL G+ H + LK +
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED 630
Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
+ +L+ MY G + + + + S T+ WN +I+ +G +EAIK F+ M
Sbjct: 631 DAFIACSLIDMYAKNGSITQSSKVFNGLKEKS-TASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGL-ALKSLMGLDTRVQN--ALITMYGR 518
Q+ +PD +T + V++AC + L EG L L +KS GL +++ +I M GR
Sbjct: 690 -QRTGHNPDDLTFLGVLTACNHSGLIHEG--LRYLDQMKSSFGLKPNLKHYACVIDMLGR 746
Query: 519 CRDIKSASTVF--ESCYNCNLCTWNCMISA--FSQN--KAEVRALELFRHLEFEPNEISI 572
+ A V E ++ W ++S+ QN E A +LF E EP +
Sbjct: 747 AGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF---ELEPEKPEN 803
Query: 573 VSILS 577
+LS
Sbjct: 804 YVLLS 808
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 225/496 (45%), Gaps = 21/496 (4%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
L + +L+ YS ++ +F NK+VV+WN M+ +M+
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 67 --EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
E ++ D T+L V + L + +HC S+K + + + N FV YAKCG L
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
+ ++ F G+ SWN ++ G +N P L +M SG D+ ++ S ++A
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
+ L L GK +H I+ E +V + S++S+Y CG++ + F M K +VS
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFVYL--SVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
WN +I G+ NG + A + +M ++ ++ +++ + C+ LR GR H YA
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQM-VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYA 623
Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
++ LL D + SL+D Y+K+ S++++ +FN + SWN+MI G
Sbjct: 624 LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEA 682
Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
LF+EM T L +L +CN + G + + + G N ++
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 412 MYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPD 470
M G L A ++ + +S +D W ++ +C + + + K + + + P+
Sbjct: 743 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPE 802
Query: 471 S-VTLVNVISACGNLE 485
+ V L N+ + G E
Sbjct: 803 NYVLLSNLYAGLGKWE 818
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 228/734 (31%), Positives = 377/734 (51%), Gaps = 38/734 (5%)
Query: 79 IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCAD 138
I AL+ + L + R +H L I G+ + ++ Y+ + SS F + A
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 139 TVS-WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
V WN+I+ N + L ++ ++ S D + S + A A L + G +++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
+ +G+E +V N+L+ MYS+ G + A + F M +D+VSWN++I G++ +G
Sbjct: 130 EQILDMGFESDLFVG--NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
+EEA ++ HE++ + PD TV +++ + L++++G+ +HG+A++ + +++ N
Sbjct: 188 YEEALEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-EM------LYL--CSQFS- 367
L+ Y K + A +F+ + + D VS+N+MI G K EM ++L QF
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP 305
Query: 368 -FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLL 426
T+ ++L +C L K I+ + LK GF + N L+ +Y CGD++ A +
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL-E 485
+ DT WN +I Q+G EA+K FK M + + D +T + +IS L +
Sbjct: 366 NSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISVSTRLAD 423
Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
L F GK LH +KS + +D V NALI MY +C ++ + +F S + TWN +IS
Sbjct: 424 LKF-GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 546 A---FSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
A F ++ R E P+ + + L C L R GK+IH + G++
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 603 NSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMC 647
I +AL++MYS C + W+ MI AYG +G+G +A+E F +M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
SGI P I+++ ACSHSGLVDEGL + M Y + P EH+ C+VD+L RS K+
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
+A EFI+ +PI+P +W ++L AC GD + ++V+ + +L P++ GY I SN Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 768 VALGRWKDAVEIGK 781
AL +W I K
Sbjct: 723 AALRKWDKVSLIRK 736
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/595 (27%), Positives = 281/595 (47%), Gaps = 23/595 (3%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCN-KDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
S L+ YS+ SSL++F K+V WN++I A +N L F+G++ E
Sbjct: 42 SGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
+ D T ++ A + + G +V+ + G +D + N V+MY++ G L +
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F M D VSWN+++SG + Y E+ L + E+ S D+ ++SS + A L
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
+ G+ +H +K G V V N L++MY + A R F M +D VS+N +
Sbjct: 222 VVKQGQGLHGFALKSGVNSV--VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I G+ EE+ + ++ + +PD+ TV +++ C L + ++ Y ++
Sbjct: 280 ICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
+ + N L+D Y+K + A +FN++ D VSWNS+ISG LF
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
K M+ + Q T L ++ L+FGK +H +K G + NAL+ MY C
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
G++ + + + DT WN VI AC + G F ++ M ++ PD T +
Sbjct: 457 GEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQM-RKSEVVPDMATFLV 514
Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
+ C +L GK +H L+ + ++ NALI MY +C ++++S VFE +
Sbjct: 515 TLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRD 574
Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHG 588
+ TW MI A+ +ALE F +E P+ + ++I+ AC+ G++ G
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 285/616 (46%), Gaps = 49/616 (7%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + L +L+ YS + + +F E +D+V+WN++I+ + L +
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
E+ I DS T+ ++ A + +KQG+ +H ++K+G+ + + N V MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
+ F M D+VS+NT++ G L E+ + F E + D +++SS +
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVL 314
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A L +LS K I+ +K G+ +V N LI +Y++CGD+ A F M CKD
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLES--TVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
VSWN+II G+ +G EA L M +M + D T + LIS+ L+ G+ +H
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLH 431
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLF 356
I+ + DL + N+L+D Y+K + + +F+++ D V+WN++IS G F
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDF 490
Query: 357 KEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
L + +Q +T L LP C S + GK IHC L+ G+ + NAL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ MY CG L + + +R+S D W +I A G ++A++TF M ++ P
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALETFADM-EKSGIVP 608
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
DSV + +I AC + L EG + +K+ +D +++
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFE-KMKTHYKIDPMIEH------------------- 648
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGK 589
+ C++ S+++ +A E + + +P+ S+L AC G + +
Sbjct: 649 ----------YACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 590 QIHGHVFHLGFQENSF 605
++ + L + +
Sbjct: 699 RVSRRIIELNPDDPGY 714
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 318/593 (53%), Gaps = 35/593 (5%)
Query: 220 MYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIA 279
MY+ CGD++ A R F + + + WN +++ A +G F + L +M + VE D
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSY 196
Query: 280 TVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAI 339
T + + + G +HG+ ++ G + NSL+ FY K+ + A +F+ +
Sbjct: 197 TFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM 256
Query: 340 APMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
D++SWNS+I+G +F +ML + +T++++ C + G
Sbjct: 257 TE-RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
+++H +K FS N L+ MY CGDL +A ++ + +S S S + +I +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-YTSMIAGYAR 374
Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
G EA+K F+ M +++ SPD T+ V++ C L EGK +H ++ +G D
Sbjct: 375 EGLAGEAVKLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---- 563
V NAL+ MY +C ++ A VF ++ +WN +I +S+N AL LF L
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 564 EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
F P+E ++ +L AC L G++IHG++ G+ + ++++L+DMY+ C
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
K +W+ MI+ YG HG G EAI LF++M +GI + S +SLL ACSHS
Sbjct: 554 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 613
Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
GLVDEG +++N M E + P EH+ CIVDML R+G L +AY FI+N+PI P +WGA
Sbjct: 614 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 673
Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
+L C H D K+ ++VAE +F+LEPEN GYY+ ++N+Y +W+ + K
Sbjct: 674 LLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 265/534 (49%), Gaps = 24/534 (4%)
Query: 72 DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
D TL ++ LK G+ V G + DS+L + MY CGDL + F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
+ + WN +M+ + + F++M SG + D+ + S + + L +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
G+ +H +K G+ + SV NSL++ Y + +++A + F MT +DV+SWN+II+G
Sbjct: 213 GGEQLHGFILKSGFGERN--SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
+ NG E+ + +M L+ +E D+AT+V++ + CADS L+ GR+VH ++
Sbjct: 271 YVSNGLAEKGLSVFVQM-LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
+ N+L+D YSK L A+ +F ++ + +VS+ SMI+G LF+EM
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCW--QLKLGFSNNTIGVNALMHMYINCG 417
T+ A+L C L+ GK +H W + LGF + NALM MY CG
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCG 446
Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
+ A + + D WN +I ++N + EA+ F + +++ SPD T+ V
Sbjct: 447 SMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
+ AC +L +G+ +HG +++ D V N+L+ MY +C + A +F+ + +L
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 538 CTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHG 588
+W MI+ + + A+ LF R E +EIS VS+L AC+ G++ G
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 258/502 (51%), Gaps = 19/502 (3%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF+ + L Y+N + + +F E + + WN ++ ++ + F
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M+ G+ DS T + + + + + G +H +K+G +S+ N V Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
++S+ F M D +SWN+I++G + N EK L F +M SG + D ++ S
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A A +S G+ +H++G+K + S N+L+ MYS+CGD+++A+ F M+ +
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACF--SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
VVS+ ++I G+A G EA L EM+ + PD+ TV +++ CA LL EG+ VH
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK---- 357
+ LG+D+ + N+LMD Y+K S+ +AEL+F+ + + D++SWN++I G K
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYA 479
Query: 358 -EML----YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
E L L + FS T+ +LP+C S + + G+ IH + ++ G+ ++ N+
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
L+ MY CG L+ A L I+ + D W ++I +G +EAI F M +Q
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM-RQAGIE 597
Query: 469 PDSVTLVNVISACGNLELAFEG 490
D ++ V+++ AC + L EG
Sbjct: 598 ADEISFVSLLYACSHSGLVDEG 619
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 219/460 (47%), Gaps = 22/460 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF SL+ Y +S+ +F E +DV++WN++I V N GL F
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M+ GI D T++ + + + GR VH + +KA + CN ++MY+KC
Sbjct: 285 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
GDL+S++ F M VS+ ++++G + + F EM G D ++++ +
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 182 AASACLGELSYGKVIHALGIK---LGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
A L GK +H IK LG++ + V+N+L+ MY++CG ++ AE F M
Sbjct: 405 NCCARYRLLDEGKRVHEW-IKENDLGFD----IFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
KD++SWN II G++ N EA L + + + PD TV ++ CA +GR
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
+HGY +R D + NSL+D Y+K +L A +LF+ IA DLVSW MI+G
Sbjct: 520 EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMH 578
Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIG 405
LF +M + + +++L +C+ ++ G + + + +
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 638
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
++ M GDL+ A+ ++ + D + W ++ C
Sbjct: 639 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 62/364 (17%)
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
D TL +V+ C + + +GK + + +D+ + + L MY C D+K AS VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL-----EFEPNEISIVSILSACTQLGV 584
+ WN +++ +++ ++ LF+ + E + S VS + + L
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS--KSFSSLRS 210
Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISA 629
+ G+Q+HG + GF E + + ++L+ Y N + ++A W+S+I+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 630 YGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL-------------- 675
Y +G + + +F +M SGI ++++S+ + C+ S L+ G
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 676 -QYYNNMLEEYD-----------VRPETEHHVC----IVDMLGRSGKLQEA---YEFIKN 716
++ N +L+ Y R ++ V ++ R G EA +E ++
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN----MYVALGR 772
I P A+L+ C+ + GK+V E ++ ++G+ I +SN MY G
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEW---IKENDLGFDIFVSNALMDMYAKCGS 447
Query: 773 WKDA 776
++A
Sbjct: 448 MQEA 451
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 239/788 (30%), Positives = 384/788 (48%), Gaps = 44/788 (5%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
L L+ AYS + S +F + VV WN+MI L FFG M E
Sbjct: 33 LKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSE 92
Query: 67 E-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
E GI D + + A K+G +H L + G+ +D + V MY K DL
Sbjct: 93 EKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLV 152
Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
S+ F MH D V+WNT++SG N LL F +M D+VSL + + A +
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
L + + +H L IK G+ + ++ LI MY C D+ AAE F + KD SW
Sbjct: 213 KLEKSDVCRCLHGLVIKKGF----IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSW 268
Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--LREGRSVHGY 303
++ +A NG FEE +L LMR+ + + V +L A + + L +G ++H Y
Sbjct: 269 GTMMAAYAHNGFFEEVLELF---DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDY 325
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
A+++ L D+ + SLM YSK L AE LF I D+VSW++MI+
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDE 384
Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
LF++M+ + + + TL ++L C + GKSIHC+ +K + A++
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
MY CG A +R+ D +N + TQ G +A +K+M + PDS
Sbjct: 445 MYAKCGRFSPALKAFERLPIK-DAVAFNALAQGYTQIGDANKAFDVYKNM-KLHGVCPDS 502
Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFES 531
T+V ++ C G ++G +K + V +ALI M+ +C + +A +F+
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 532 C-YNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRH 587
C + + +WN M++ + + A+ FR ++ F+PN ++ V+I+ A +L LR
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
G +H + GF + + ++L+DMY+ C K +W++M+SAY
Sbjct: 623 GMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAA 682
Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
HG A+ LF M + ++P S +S+LSAC H+GLV+EG + + M E + + E E
Sbjct: 683 HGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVE 742
Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
H+ C+VD+LG++G EA E ++ + ++ GVWGA+L++ H + + L KL
Sbjct: 743 HYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKL 802
Query: 753 EPENVGYY 760
EP N +Y
Sbjct: 803 EPLNPSHY 810
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 194/405 (47%), Gaps = 21/405 (5%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
+G + + +TSL++ YS E + LF ++DVV+W+AMI + + +
Sbjct: 329 QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISL 388
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F +M+ I+ ++ TL ++ + + G+ +HC +IKA + ++ ++MYAK
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CG + + F + D V++N + G K ++ M G D+ ++
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGM 508
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC- 239
+ A + + G ++ IK G++ +V+ ++LI+M+++C + AA F C
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVA--HALINMFTKCDALAAAIVLF--DKCG 564
Query: 240 --KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
K VSWN +++G+ L+G+ EEA +M++ + +P+ T V ++ A+ LR G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK-FQPNAVTFVNIVRAAAELSALRVG 623
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
SVH I+ + NSL+D Y+K + +E F I+ +VSWN+M+S
Sbjct: 624 MSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN-KYIVSWNTMLSAYAA 682
Query: 358 EMLYLCSQFSFSTL------------LAILPSCNSPESLEFGKSI 390
L C+ F ++ L++L +C +E GK I
Sbjct: 683 HGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 26/212 (12%)
Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
L+ ++ C N + +HG SL+ + N LI Y + + +F+S
Sbjct: 8 LLLMLRECKNFRCLLQ---VHG----SLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVR 60
Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLE----FEPNEISIVSILSACTQLGVLRHGK 589
+ + WN MI +++ AL F ++ +P++ S L AC + G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 590 QIHGHVFHLGFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHG 634
+IH + +G + + +I +AL++MY + K W++M+S +G
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 635 KGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
A+ LFH+M + + S+ +L+ A S
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 328/612 (53%), Gaps = 42/612 (6%)
Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
+LG++LG N+ ++M+ + G++ A F M+ +++ SWN ++ G+A G
Sbjct: 126 SLGVELG----------NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGY 175
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
F+EA L H M + V+PD+ T ++ C L G+ VH + +R D+ ++N
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQFSFS 369
+L+ Y K + A LLF+ + P D++SWN+MISG F+ E+ + S
Sbjct: 236 ALITMYVKCGDVKSARLLFDRM-PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 370 ----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
TL +++ +C G+ IH + + GF+ + N+L MY+N G A L
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354
Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
R+ D W +I N +AI T++ M Q + PD +T+ V+SAC L
Sbjct: 355 FSRMERK-DIVSWTTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLG 412
Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
G LH LA+K+ + V N LI MY +C+ I A +F + N+ +W +I+
Sbjct: 413 DLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIA 472
Query: 546 AFSQNKAEVRALELFRHLE--FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
N AL R ++ +PN I++ + L+AC ++G L GK+IH HV G +
Sbjct: 473 GLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 604 SFISSALLDMYSNC-KSNAAWSS-------------MISAYGYHGKGWEAIELFHEMCNS 649
F+ +ALLDMY C + N AWS +++ Y G+G +ELF M S
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKS 592
Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
+RP + + ISLL CS S +V +GL Y++ M E+Y V P +H+ C+VD+LGR+G+LQE
Sbjct: 593 RVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
A++FI+ +P+ P P VWGA+L+AC H +G+ A+ +F+L+ ++VGYYI L N+Y
Sbjct: 652 AHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYAD 711
Query: 770 LGRWKDAVEIGK 781
G+W++ ++ +
Sbjct: 712 CGKWREVAKVRR 723
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 260/548 (47%), Gaps = 24/548 (4%)
Query: 57 GLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVN 116
+ M E + D + +V ++G V+ +++ + L N F+
Sbjct: 78 AMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA 137
Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNV 175
M+ + G+L + F M + SWN ++ G Y ++ + + M W G + D
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 176 SLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
+ + + +L+ GK +H ++ GYE + V N+LI+MY +CGD+++A F
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELD--IDVVNALITMYVKCGDVKSARLLFD 255
Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
M +D++SWNA+I G+ NG E +L M+ + SV+PD+ T+ ++IS C R
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRR 314
Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
GR +H Y I D+ + NSL Y + S +AE LF+ + D+VSW +MISG
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTTMISGY 373
Query: 356 FKEML--------YLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
L + Q S T+ A+L +C + L+ G +H +K +
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
I N L++MY C + A + I + S W +I N EA+ + M
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFEALIFLRQM-- 490
Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
+ P+++TL ++AC + GK +H L++ +GLD + NAL+ MY RC +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 524 SASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACT 580
+A + F S ++ +WN +++ +S+ +ELF + P+EI+ +S+L C+
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 581 QLGVLRHG 588
+ ++R G
Sbjct: 610 KSQMVRQG 617
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 235/475 (49%), Gaps = 21/475 (4%)
Query: 29 LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV-EEGIRFDSTTLLIIVSALTQMN 87
+F + +++ +WN ++ + + + M+ G++ D T ++ +
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 88 CLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMS 147
L +G+ VH ++ G D + N + MY KCGD+ S+ F M D +SWN ++S
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 148 GCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYED 207
G N + L F M D ++L+S ++A LG+ G+ IHA I G+
Sbjct: 271 GYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGF-- 328
Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
+ +SV NSL MY G AE+ F M KD+VSW +I G+ N ++A D +
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID-TYR 387
Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLLMMNSLMDFYSKS 326
M SV+PD TV ++S CA L G +H AI+ RL+ Y +++ N+L++ YSK
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY-VIVANNLINMYSKC 446
Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCS-----QFSFSTLLAIL 375
+ KA +F+ I P +++SW S+I+GL F+ +++L Q + TL A L
Sbjct: 447 KCIDKALDIFHNI-PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAAL 505
Query: 376 PSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDT 435
+C +L GK IH L+ G + NAL+ MY+ CG + A+S Q S D
Sbjct: 506 AACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS--QFNSQKKDV 563
Query: 436 SCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
+ WNI++ ++ G ++ F M + + PD +T ++++ C ++ +G
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSR-VRPDEITFISLLCGCSKSQMVRQG 617
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 217/456 (47%), Gaps = 18/456 (3%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G+ + +L+T Y +S+ LF +D+++WNAMI+ EN GL F
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M + D TL ++SA + + GR +H I G D S+CN MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G +E FS M D VSW T++SG +N P+K + +R M + D +++++ +
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
+A A LG+L G +H L IK YV V N+LI+MYS+C I+ A F + K+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARL--ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKN 463
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
V+SW +II G LN + EA L +M++ +++P+ T+ ++ CA L G+ +H
Sbjct: 464 VISWTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
+ +R +G D + N+L+D Y + ++ A FN + D+ SWN +++G
Sbjct: 522 AHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN--SQKKDVTSWNILLTGYSERGQG 579
Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
LF M+ + T +++L C+ + + G G + N +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVAC 445
+ + G+L A +Q++ D + W ++ AC
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 156/375 (41%), Gaps = 58/375 (15%)
Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
NG +EA+K SM Q+ + D V ++ C EG ++ +AL S+ L
Sbjct: 72 NGKLEEAMKLLNSM-QELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130
Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF-- 565
+ NA + M+ R ++ A VF NL +WN ++ +++ A+ L+ + +
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 566 --EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
+P+ + +L C + L GK++H HV G++ + + +AL+ MY C
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS-- 666
+ +W++MIS Y +G E +ELF M + P ++ S++SAC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 667 ---------HSGLVDEGL-----------QYYNNM-----LEEYDVRPETEHHVCIVDML 701
H+ ++ G Q Y N E+ R E + V M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 702 GR------SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
K + Y + ++P A+LSAC+ GD G ++ +L K
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK--AR 428
Query: 756 NVGYYI---SLSNMY 767
+ Y I +L NMY
Sbjct: 429 LISYVIVANNLINMY 443
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 347 bits (889), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 225/694 (32%), Positives = 357/694 (51%), Gaps = 41/694 (5%)
Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL-LYFREMGWSGEQA 172
+ YA G +SS F D+ + ++ + + + + LY R + + + +
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
V S A + LS G +H IK G +D + SL+ MY Q G++ AE+
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE--TSLLCMYGQTGNLSDAEK 157
Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
F GM +D+V+W+ ++ NG+ +A + M + VEPD T+++++ CA+
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAELG 216
Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
LR RSVHG R++ D + NSL+ YSK L +E +F IA N VSW +MI
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN-AVSWTAMI 275
Query: 353 SGL------------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
S F EM+ + + TL ++L SC + GKS+H + ++
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 401 NNTIGVN-ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
N ++ AL+ +Y CG L ++L R+ + + WN +I G +A+ F+
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVL-RVVSDRNIVAWNSLISLYAHRGMVIQALGLFR 394
Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRC 519
M Q+ PD+ TL + ISAC N L GK +HG +++ + D VQN+LI MY +
Sbjct: 395 QMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKS 452
Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSIL 576
+ SASTVF + ++ TWN M+ FSQN V A+ LF H E NE++ ++++
Sbjct: 453 GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVI 512
Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS-NAAWS----------- 624
AC+ +G L GK +H + G ++ F +AL+DMY+ C NAA +
Sbjct: 513 QACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 625 ---SMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
SMI+AYG HG+ AI F++M SG +P + +++LSAC HSG V+EG +YY N+
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNL 630
Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
++ + V P +EH C +D+L RSG L+EAY IK +P VWG++++ C H +
Sbjct: 631 MKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 690
Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
K + L + ++ GYY LSN+Y G W++
Sbjct: 691 IKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEE 724
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 277/549 (50%), Gaps = 20/549 (3%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
TSLL Y + +F +D+V W+ ++++C+EN VV L F MV++G+
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
D+ T++ +V ++ CL+ R VH + D +LCN + MY+KCGDL SSE
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
F + + VSW ++S + EK L F EM SG + + V+L S +++ +G +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
GK +H ++ D Y S++ +L+ +Y++CG + E ++ +++V+WN++I
Sbjct: 320 REGKSVHGFAVRREL-DPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
+A G +A L +M R ++PD T+ + IS C ++ L+ G+ +HG+ IR +
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
D + NSL+D YSKS S+ A +FN I +V+WNSM+ G LF
Sbjct: 438 -DEFVQNSLIDMYSKSGSVDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAISLFDY 495
Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
M + + + T LA++ +C+S SLE GK +H +L + + AL+ MY CGD
Sbjct: 496 MYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGD 554
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
L AA ++ R + W+ +I A +G AI TF M + P+ V +NV+
Sbjct: 555 LNAAETVF-RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV-ESGTKPNEVVFMNVL 612
Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA-STVFESCYNCNL 537
SACG+ EGK L + ++ I + R D+K A T+ E + +
Sbjct: 613 SACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672
Query: 538 CTWNCMISA 546
W +++
Sbjct: 673 SVWGSLVNG 681
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 181/629 (28%), Positives = 311/629 (49%), Gaps = 30/629 (4%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
LP T L+ +Y+ + +SS +F D + +I V + + + +V
Sbjct: 35 LPV-TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVS 93
Query: 67 EGIRFDSTTLLIIVSALT-QMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
E + ++ A L G VH IK G+ D+ + + MY + G+L+
Sbjct: 94 ETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLS 153
Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
+E F GM D V+W+T++S CL N K L F+ M G + D V++ S V A
Sbjct: 154 DAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCA 213
Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
LG L + +H + ++ ++ NSL++MYS+CGD+ ++ER F + K+ VSW
Sbjct: 214 ELGCLRIARSVHGQITRKMFDLDE--TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
A+I + E+A EM + +EP++ T+ +++S C L+REG+SVHG+A+
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 306 RRLL--GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS---------- 353
RR L Y+ L + +L++ Y++ LS E + ++ N +V+WNS+IS
Sbjct: 331 RRELDPNYESLSL-ALVELYAECGKLSDCETVLRVVSDRN-IVAWNSLISLYAHRGMVIQ 388
Query: 354 --GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
GLF++M+ + TL + + +C + + GK IH ++ S+ + N+L+
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLID 447
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
MY G + +A ++ +I H S + WN ++ +QNG+ EAI F M +
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVT-WNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNE 505
Query: 472 VTLVNVISACGNLELAFEGKSL-HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFE 530
VT + VI AC ++ +GK + H L + L L T ALI MY +C D+ +A TVF
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT--DTALIDMYAKCGDLNAAETVFR 563
Query: 531 SCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRH 587
+ + ++ +W+ MI+A+ + A+ F + +PNE+ +++LSAC G +
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 588 GKQIHGHVFHLGFQENSFISSALLDMYSN 616
GK + G NS + +D+ S
Sbjct: 624 GKYYFNLMKSFGVSPNSEHFACFIDLLSR 652
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 170/350 (48%), Gaps = 15/350 (4%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
S +L+ Y+ + ++++V WN++I+ V+ L F +MV + I
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
+ D+ TL +SA + G+ +H I+ ++D + N ++MY+K G ++S+
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSAST 460
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
F+ + V+WN+++ G N + + F M S + + V+ + + A + +G
Sbjct: 461 VFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGS 520
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
L GK +H I G +D + +LI MY++CGD+ AAE F M+ + +VSW+++I
Sbjct: 521 LEKGKWVHHKLIISGLKD---LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
+ + ++G+ A ++M + +P+ + ++S C S + EG+ + + + +
Sbjct: 578 NAYGMHGRIGSAISTFNQM-VESGTKPNEVVFMNVLSACGHSGSVEEGK--YYFNLMKSF 634
Query: 310 GYDLLMMNS-----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
G + NS +D S+S L +A + + D W S+++G
Sbjct: 635 G---VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 4 LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGE 63
L L T T+L+ Y+ ++ +F ++ +V+W++MI A + + + F +
Sbjct: 536 LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595
Query: 64 MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
MVE G + + + ++SA +++G+ L G+ +S F+++ ++ GD
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGD 655
Query: 124 LNSSECTFSGM-HCADTVSWNTIMSGC 149
L + T M AD W ++++GC
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGC 682
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 342 bits (878), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 226/730 (30%), Positives = 375/730 (51%), Gaps = 44/730 (6%)
Query: 85 QMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWN 143
+ + QGR +H K L V MY KCG L+ +E F M +WN
Sbjct: 92 KRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWN 151
Query: 144 TIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
T++ + N P L + M G S + + A A L ++ G +H+L +KL
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKL 211
Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAF 262
GY + ++ N+L+SMY++ D+ AA R F G K D V WN+I+ ++ +GK E
Sbjct: 212 GYHSTGFI--VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETL 269
Query: 263 DLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-GYDLLMMNSLMD 321
+L EM M P+ T+V+ ++ C + G+ +H ++ +L + N+L+
Sbjct: 270 ELFREMH-MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIA 328
Query: 322 FYSKSNSLSKAELLFNAIAPMN--DLVSWNSMISGLFKEMLYLCSQFSFSTLLA------ 373
Y++ + +AE + MN D+V+WNS+I G + ++Y + FS ++A
Sbjct: 329 MYTRCGKMPQAERILRQ---MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
I+ + +L G +H + +K G+ +N N L+ MY C
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFL 445
Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
R+ H+ D W VI QN EA++ F+ + +++ D + L +++ A L+
Sbjct: 446 RM-HDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSM 503
Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
K +H L+ + LDT +QN L+ +YG+CR++ A+ VFES ++ +W MIS+
Sbjct: 504 LIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 548 SQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
+ N E A+ELFR + + ++++ ILSA L L G++IH ++ GF
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622
Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
I+ A++DMY+ C K ++SMI+AYG HG G A+ELF +M +
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682
Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQE 709
+ P S ++LL ACSH+GL+DEG + M EY++ P EH+VC+VDMLGR+ + E
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVE 742
Query: 710 AYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVA 769
A+EF+K + +P VW A+L+AC H + ++G+ A+ L +LEP+N G + +SN++
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
Query: 770 LGRWKDAVEI 779
GRW D ++
Sbjct: 803 QGRWNDVEKV 812
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 204/783 (26%), Positives = 355/783 (45%), Gaps = 69/783 (8%)
Query: 12 SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
L+ Y + + +F E ++ WN MI A V N L + M EG+
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 72 DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTF 131
++ ++ A ++ ++ G +H L +K G + + N V+MYAK DL+++ F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 132 SGMH-CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
G D V WN+I+S + + L FREM +G ++ ++ SA+ A
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
GK IHA +K S + V N+LI+MY++CG + AER M DVV+WN++I
Sbjct: 301 KLGKEIHASVLKSSTHSSE-LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
G+ N ++EA + +M + + D ++ ++I+ L G +H Y I+
Sbjct: 360 GYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 311 YDLLMMNSLMDFYSKSN---SLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
+L + N+L+D YSK N + +A L + DL+SW ++I+G L
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD----KDLISWTTVIAGYAQNDCHVEALEL 474
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F+++ + L +IL + + +S+ K IHC L+ G + I N L+ +Y
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ-NELVDVYGK 533
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
C ++ A + + I D W +I + NG+ EA++ F+ M + S DSV L+
Sbjct: 534 CRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALL 591
Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
++SA +L +G+ +H L+ L+ + A++ MY C D++SA VF+
Sbjct: 592 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 651
Query: 536 NLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSACTQLGVLRHGK--- 589
L + MI+A+ + A+ELF RH P+ IS +++L AC+ G+L G+
Sbjct: 652 GLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFL 711
Query: 590 QIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
+I H + L ++ L+DM G+ +E F +
Sbjct: 712 KIMEHEYELEPWPEHYV--CLVDML-------------------GRANCVVEAFEFVKMM 750
Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDML----GRSG 705
PT +LL+AC + G +LE + P+ ++ +V + GR
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE---LEPKNPGNLVLVSNVFAEQGRWN 807
Query: 706 KLQEAYEFIKNLPIQPKPGV-WGAMLSAC--------SHHGDTKMGKQVAELLFKLEPEN 756
+++ +K ++ PG W M SH ++ ++++E+ KLE E
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE- 866
Query: 757 VGY 759
VGY
Sbjct: 867 VGY 869
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 218/723 (30%), Positives = 377/723 (52%), Gaps = 45/723 (6%)
Query: 94 VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
VVH I G+ D+ L N+ +N+Y++ G + + F M + VSW+T++S C H+
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK----VIHALGIKLGYEDSP 209
E+ L+ F E + + + N + S+ AC G G+ + + +K G++
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFI-QACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 210 YVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
YV LI Y + G+I+ A F + K V+W +I G G+ + L +++
Sbjct: 184 YVGTL--LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL- 240
Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
+ +V PD + T++S C+ L G+ +H + +R L D +MN L+D Y K +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 330 SKAELLFNAIAPMNDLVSWNSMISG-----LFKEMLYL---CSQFSFSTLL----AILPS 377
A LFN + P +++SW +++SG L KE + L S+F + +IL S
Sbjct: 301 IAAHKLFNGM-PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 378 CNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSC 437
C S +L FG +H + +K N++ N+L+ MY C L A + I +D
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVL 418
Query: 438 WNIVIVACTQNG---HFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
+N +I ++ G EA+ F+ M + + P +T V+++ A +L K +H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
GL K + LD +ALI +Y C +K + VF+ +L WN M + + Q
Sbjct: 478 GLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 555 RALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
AL LF L+ P+E + ++++A L ++ G++ H + G + N +I++ALL
Sbjct: 538 EALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALL 597
Query: 612 DMYSNCKS---------NAA------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
DMY+ C S +AA W+S+IS+Y HG+G +A+++ +M + GI P
Sbjct: 598 DMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYI 657
Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
+ + +LSACSH+GLV++GL+ + ML + + PETEH+VC+V +LGR+G+L +A E I+
Sbjct: 658 TFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEK 716
Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
+P +P VW ++LS C+ G+ ++ + AE+ +P++ G + LSN+Y + G W +A
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEA 776
Query: 777 VEI 779
++
Sbjct: 777 KKV 779
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 185/693 (26%), Positives = 320/693 (46%), Gaps = 64/693 (9%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITAC----VENRCVVMGLHFFGEMV 65
S L+ YS + +F + +++V+W+ M++AC + +V+ L F+
Sbjct: 82 SNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW---- 137
Query: 66 EEGIRFDSTTLLIIVSALTQMNCLK-QGR----VVHCLSIKAGMIADSSLCNVFVNMYAK 120
R DS I+ S + + L +GR + +K+G D + + ++ Y K
Sbjct: 138 --RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
G+++ + F + TV+W T++SGC+ L F ++ D LS+
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
++A + L L GK IHA ++ G E S+ N LI Y +CG + AA + F GM K
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMD--ASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
+++SW ++ G+ N +EA +L M ++PD+ ++++ CA L G V
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
H Y I+ LG D + NSL+D Y+K + L+ A +F+ A D+V +N+MI G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA-DVVLFNAMIEGYSRLGT 431
Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
+F++M + + S T +++L + S SL K IH K G + +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
+AL+ +Y NC L + + + D WN + Q +EA+ F + Q
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLS 549
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
PD T N+++A GNL G+ H LK + + + NAL+ MY +C + A
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQL 582
F+S + ++ WN +IS+++ + +AL++ + EPN I+ V +LSAC+
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
G++ G + + G + + + M+S G G+ +A EL
Sbjct: 670 GLVEDGLKQFELMLRFGIEPET----------------EHYVCMVSLLGRAGRLNKAREL 713
Query: 643 FHEMCNSGIRPTKSSVI---SLLSACSHSGLVD 672
+M PTK + I SLLS C+ +G V+
Sbjct: 714 IEKM------PTKPAAIVWRSLLSGCAKAGNVE 740
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 262/545 (48%), Gaps = 21/545 (3%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + T L+ Y + + +F K VTW MI+ CV+ + L F
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+++E+ + D L ++SA + + L+ G+ +H ++ G+ D+SL NV ++ Y KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G + ++ F+GM + +SW T++SG N ++ + F M G + D + SS +
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
+ A L L +G +HA IK + Y VTNSLI MY++C + A + F D
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSY--VTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 242 VVSWNAIIDGFALNG---KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
VV +NA+I+G++ G + EA ++ +M+ R + P + T V+L+ A L +
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRF-RLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE 358
+HG + L D+ ++L+D YS L + L+F+ + + DLV WNSM +G ++
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQ 533
Query: 359 M-------LYLCSQFSFS-----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
L+L Q S T ++ + + S++ G+ HC LK G N
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
NAL+ MY CG A + + D CWN VI + +G ++A++ + M +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKM-MSEG 651
Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
P+ +T V V+SAC + L +G L L+ + +T ++++ GR + A
Sbjct: 652 IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 527 TVFES 531
+ E
Sbjct: 712 ELIEK 716
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 192/421 (45%), Gaps = 43/421 (10%)
Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
L+ L A LL VHG I L D + N L++ YS++ + A +F + P
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM-PER 108
Query: 344 DLVSWNSMIS-----GLFKEMLYLCSQFSFST--------LLAILPSCNSPESLEFGK-- 388
+LVSW++M+S G+++E L + +F + L + + +C+ + G+
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWM 166
Query: 389 --SIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT 446
+ + +K GF + L+ Y+ G++ A + + S T W +I C
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS-TVTWTTMISGCV 225
Query: 447 QNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDT 506
+ G +++ F + + N PD L V+SAC L GK +H L+ + +D
Sbjct: 226 KMGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE-- 564
+ N LI Y +C + +A +F N N+ +W ++S + QN A+ELF +
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 565 -FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK----- 618
+P+ + SIL++C L L G Q+H + +S+++++L+DMY+ C
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 619 ----------SNAAWSSMISAYGYHGKGW---EAIELFHEMCNSGIRPTKSSVISLLSAC 665
+++MI Y G W EA+ +F +M IRP+ + +SLL A
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 666 S 666
+
Sbjct: 465 A 465
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RG + + +LL Y+ E + F ++DVV WN++I++ + L
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQM 643
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
+M+ EGI + T + ++SA + ++ G L ++ G+ ++ V++ +
Sbjct: 644 LEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGR 703
Query: 121 CGDLNSSECTFSGMHCAD-TVSWNTIMSGC 149
G LN + M + W +++SGC
Sbjct: 704 AGRLNKARELIEKMPTKPAAIVWRSLLSGC 733
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 226/720 (31%), Positives = 365/720 (50%), Gaps = 37/720 (5%)
Query: 89 LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
L+ R + L I G+ + + + ++ YA G N S F + D WN+I+
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
N + L +F M SG+ D+ + V+A A L G +H L +K G D
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
+V S + YS+CG ++ A F M +DVV+W AII G NG+ E L +M
Sbjct: 160 N-TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKM 218
Query: 269 QLMRSV--EPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
S +P+ T+ C++ L+EGR +HG+A++ L + +S+ FYSKS
Sbjct: 219 HSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 327 NSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQFSFSTLLAI 374
+ S+A L F + D+ SW S+I+ L F EM + +
Sbjct: 279 GNPSEAYLSFRELGD-EDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCL 337
Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
+ + GK+ H + ++ FS ++ N+L+ MY L A L RIS +
Sbjct: 338 INELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGN 397
Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
WN ++ + + I+ F+ + Q DS + +VIS+C ++ GKSLH
Sbjct: 398 KEAWNTMLKGYGKMKCHVKCIELFRKI-QNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
+K+ + L V N+LI +YG+ D+ A +F + N+ TWN MI+++ +
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSE 515
Query: 555 RALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
+A+ LF + F+P+ I++V++L AC G L G+ IH ++ + N +S+AL+
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575
Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
DMY+ C K W+ MIS YG HG AI LF +M S ++PT
Sbjct: 576 DMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP 635
Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
+ ++LLSAC+H+GLV++G + + M +YDV+P +H+ C+VD+L RSG L+EA + +
Sbjct: 636 TFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMS 694
Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
+P P +WG +LS+C HG+ +MG ++AE +P+N GYYI L+NMY A G+W++A
Sbjct: 695 MPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEA 754
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 177/634 (27%), Positives = 304/634 (47%), Gaps = 25/634 (3%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G ++ ++ L+++Y++ S +F+ +D+ WN++I A N L FF
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIK-AGMIADSSLCNVFVNMYAK 120
M+ G D T ++VSA ++ G VH L +K G ++++ FV Y+K
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSK 173
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNV---SL 177
CG L + F M D V+W I+SG + N E L Y +M +G D +L
Sbjct: 174 CGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233
Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
A + LG L G+ +H +K G S +V +S+ S YS+ G+ A +F +
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ--SSMFSFYSKSGNPSEAYLSFREL 291
Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
+D+ SW +II A +G EE+FD+ EMQ + + PD + LI+ +L+ +G
Sbjct: 292 GDEDMFSWTSIIASLARSGDMEESFDMFWEMQ-NKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
++ HG+ IR D + NSL+ Y K LS AE LF I+ + +WN+M+ G
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 355 ---------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
LF+++ L + ++ +++ SC+ ++ GKS+HC+ +K
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
VN+L+ +Y GDL A+ + N T WN +I + ++AI F M +
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCEADTNVIT--WNAMIASYVHCEQSEKAIALFDRMV-SE 527
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
N P S+TLV ++ AC N G+ +H ++ ++ + ALI MY +C ++ +
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS 587
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQL 582
+F++ + WN MIS + + A+ LF +E +P + +++LSACT
Sbjct: 588 RELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHA 647
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
G++ GK++ + + N S L+D+ S
Sbjct: 648 GLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSR 681
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 234/504 (46%), Gaps = 33/504 (6%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
+S+ + YS + F E ++D+ +W ++I + + + F EM +G+
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH 328
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
D + +++ L +M + QG+ H I+ DS++CN ++MY K L+ +E
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 131 FSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
F + + +WNT++ G KC+ FR++ G + D+ S +S +++ + +G
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK---DVVSWN 246
+ GK +H +K + + +SV NSLI +Y + GD+ A W M C+ +V++WN
Sbjct: 449 VLLGKSLHCYVVKTSLDLT--ISVVNSLIDLYGKMGDLTVA----WRMFCEADTNVITWN 502
Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
A+I + + E+A L M + + +P T+VTL+ C ++ L G+ +H Y
Sbjct: 503 AMIASYVHCEQSEKAIALFDRM-VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITE 561
Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
+L + +L+D Y+K L K+ LF+A D V WN MISG
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
LF +M + + T LA+L +C +E GK + + N + L+ +
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLS 680
Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS--- 471
G+L A S + + + D W ++ +C +G F+ I+ M ++ AS
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIR----MAERAVASDPQNDG 736
Query: 472 --VTLVNVISACGNLELAFEGKSL 493
+ L N+ SA G E A + +
Sbjct: 737 YYIMLANMYSAAGKWEEAERAREM 760
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 6 HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
+L S +L+ Y+ + E S LF KD V WN MI+ + V + F +M
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626
Query: 66 EEGIRFDSTTLLIIVSALTQMNCLKQGRVV----HCLSIKAGMIADSSLCNVFVNMYAKC 121
E ++ T L ++SA T ++QG+ + H +K + S L V++ ++
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCL----VDLLSRS 682
Query: 122 GDLNSSECTFSGM-HCADTVSWNTIMSGCL 150
G+L +E T M D V W T++S C+
Sbjct: 683 GNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 340 bits (873), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/687 (30%), Positives = 358/687 (52%), Gaps = 53/687 (7%)
Query: 142 WNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGI 201
W ++ + +N + +L + +M G + DN + + + A A L ++ GK IHA
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 202 KLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEE 260
K GY DS V+V N+L+++Y +CGD A + F ++ ++ VSWN++I K+E
Sbjct: 125 KFGYGVDS--VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEM 182
Query: 261 AFDLLHEMQLMRSVEPDIATVVTLISLCADSLL---LREGRSVHGYAIRRLLGYDLLMMN 317
A + M L +VEP T+V++++ C++ + L G+ VH Y +R+ + ++N
Sbjct: 183 ALEAFRCM-LDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIIN 240
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
+L+ Y K L+ +++L + DLV+WN+++S L +EM+ +
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFGG-RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG-FSNNTIGVNALMHMYINCGDLVAAFS 424
T+ ++LP+C+ E L GK +H + LK G N+ +AL+ MY NC +++
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
+ + + WN +I +QN H +EA+ F M + +S T+ V+ AC
Sbjct: 360 VFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
+++HG +K + D VQN L+ MY R I A +F + +L TWN MI
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 545 SAFSQNKAEVRALELFRHLE--------------FEPNEISIVSILSACTQLGVLRHGKQ 590
+ + ++ AL L ++ +PN I++++IL +C L L GK+
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
IH + + + SAL+DMY+ C K+ W+ +I AYG HG
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
G EAI+L M G++P + + IS+ +ACSHSG+VDEGL+ + M +Y V P ++H+
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQ-PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEP 754
C+VD+LGR+G+++EAY+ + +P K G W ++L A H + ++G+ A+ L +LEP
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718
Query: 755 ENVGYYISLSNMYVALGRWKDAVEIGK 781
+Y+ L+N+Y + G W A E+ +
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRR 745
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 272/602 (45%), Gaps = 59/602 (9%)
Query: 9 TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
+ +L+ Y F + +F ++ V+WN++I++ M L F M++E
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194
Query: 69 IRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
+ S TL+ +V+A L L G+ VH ++ G + +S + N V MY K G L
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLA 253
Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASA 185
SS+ D V+WNT++S N + L Y REM G + D ++SS + A +
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 186 CLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
L L GK +HA +K G D V ++L+ MY C + + R F GM + + W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
NA+I G++ N +EA L M+ + + T+ ++ C S ++HG+ +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-LFKE-----M 359
+R L D + N+LMD YS+ + A +F + DLV+WN+MI+G +F E +
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITGYVFSEHHEDAL 491
Query: 360 LYL-------------CSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNN 402
L L S+ S TL+ ILPSC + +L GK IH + +K + +
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 403 TIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT 462
+AL+ MY CG L + + +I + WN++I+A +G+ QEAI + M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGNGQEAIDLLR-MM 609
Query: 463 QQQNASPDSVTLVNVISACGNLELAFEG---------------KSLHGLALKSLMGLDTR 507
Q P+ VT ++V +AC + + EG S H + L+G R
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFS-QNKAEVRALELFRHLEFE 566
++ A M RD A W+ ++ A N E+ + ++ E
Sbjct: 670 IKEAYQLMNMMPRDFNKAG------------AWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 567 PN 568
PN
Sbjct: 718 PN 719
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 176/735 (23%), Positives = 338/735 (45%), Gaps = 71/735 (9%)
Query: 41 WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
W ++ + V + + + + +M+ GI+ D+ ++ A+ + ++ G+ +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 KAGMIADS-SLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCL 159
K G DS ++ N VN+Y KCGD + F + + VSWN+++S E L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 160 LYFREMGWSGEQADNVSLSSAVAASACLG---ELSYGKVIHALGIKLGYEDSPYVSVTNS 216
FR M + + +L S V A + L L GK +HA G++ G +S + N+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINT 241
Query: 217 LISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
L++MY + G + +++ +D+V+WN ++ N + EA + L EM ++ VEP
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEP 300
Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELL 335
D T+ +++ C+ +LR G+ +H YA++ L + + ++L+D Y + +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLA-ILPSCNSPE 382
F+ + + WN+MI+G LF M + ST +A ++P+C
Sbjct: 361 FDGMFD-RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
+ ++IH + +K G + N LM MY G + A + ++ + D WN +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMI 478
Query: 443 VACTQNGHFQEAIKTFKSMTQQQNA----------SPDSVTLVNVISACGNLELAFEGKS 492
+ H ++A+ M + P+S+TL+ ++ +C L +GK
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
+H A+K+ + D V +AL+ MY +C ++ + VF+ N+ TWN +I A+ +
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 553 EVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSA 609
A++L R + + PNE++ +S+ +AC+ G++ G +I F++
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI----FYV----------- 643
Query: 610 LLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSG 669
+ Y S+ ++ ++ G G+ EA +L + M + S SLL A
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWS--SLLGASRIHN 701
Query: 670 LVDEGLQYYNNMLEEYDVRPET-EHHVCIVDMLGRSGKLQEAYEFIKNLP---IQPKPGV 725
++ G N+++ + P H+V + ++ +G +A E +N+ ++ +PG
Sbjct: 702 NLEIGEIAAQNLIQ---LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG- 757
Query: 726 WGAMLSACS--HHGD 738
CS HGD
Sbjct: 758 -------CSWIEHGD 765
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 340 bits (872), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/596 (31%), Positives = 323/596 (54%), Gaps = 38/596 (6%)
Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
L+S++ + G ++ A R F + K V ++ ++ GFA ++A M+ VE
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY-DDVE 132
Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
P + L+ +C D LR G+ +HG ++ DL M L + Y+K +++A +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 336 FNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
F+ + P DLVSWN++++G + K M + SF T++++LP+ ++
Sbjct: 193 FDRM-PERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 384 LEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIV 443
+ GK IH + ++ GF + AL+ MY CG L A L + + S WN +I
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS-WNSMID 310
Query: 444 ACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMG 503
A QN + +EA+ F+ M + P V+++ + AC +L G+ +H L+++ +G
Sbjct: 311 AYVQNENPKEAMLIFQKMLDE-GVKPTDVSVMGALHACADLGDLERGRFIHKLSVE--LG 367
Query: 504 LDTRVQ--NALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
LD V N+LI+MY +C+++ +A+++F + L +WN MI F+QN + AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC- 617
R +P+ + VS+++A +L + H K IHG V +N F+++AL+DMY+ C
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 618 --------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
+ W++MI YG HG G A+ELF EM I+P + +S++S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
ACSHSGLV+ GL+ + M E Y + +H+ +VD+LGR+G+L EA++FI +P++P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
V+GAML AC H + ++ AE LF+L P++ GY++ L+N+Y A W+ ++
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 215/398 (54%), Gaps = 16/398 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF L T L Y+ + +F +D+V+WN ++ +N M L
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M EE ++ T++ ++ A++ + + G+ +H ++++G + ++ V+MYAKC
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G L ++ F GM + VSWN+++ + N P++ +L F++M G + +VS+ A+
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A A LG+L G+ IH L ++LG + + VSV NSLISMY +C +++ A F + +
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRN--VSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
+VSWNA+I GFA NG+ +A + +M+ R+V+PD T V++I+ A+ + + +H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMR-SRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------- 354
G +R L ++ + +L+D Y+K ++ A L+F+ ++ + + +WN+MI G
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERH-VTTWNAMIDGYGTHGFG 520
Query: 355 -----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
LF+EM + + T L+++ +C+ +E G
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/495 (26%), Positives = 230/495 (46%), Gaps = 24/495 (4%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE---E 67
T L++ + + + +F +K V ++ M+ + + L FF M E
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
+ ++ T LL + + L+ G+ +H L +K+G D NMYAKC +N +
Sbjct: 133 PVVYNFTYLLKVCGDEAE---LRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
F M D VSWNTI++G N L + M + +++ S + A + L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
+S GK IH ++ G++ V+++ +L+ MY++CG +E A + F GM ++VVSWN+
Sbjct: 250 RLISVGKEIHGYAMRSGFDS--LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
+ID + N +EA + +M L V+P +V+ + CAD L GR +H ++
Sbjct: 308 MIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 366
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------ 355
L ++ ++NSL+ Y K + A +F + LVSWN+MI G
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-RTLVSWNAMILGFAQNGRPIDALNY 425
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F +M + T ++++ + K IH ++ N AL+ MY
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
CG ++ A + +S T+ WN +I +G + A++ F+ M Q+ P+ VT +
Sbjct: 486 CGAIMIARLIFDMMSERHVTT-WNAMIDGYGTHGFGKAALELFEEM-QKGTIKPNGVTFL 543
Query: 476 NVISACGNLELAFEG 490
+VISAC + L G
Sbjct: 544 SVISACSHSGLVEAG 558
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 218/742 (29%), Positives = 372/742 (50%), Gaps = 49/742 (6%)
Query: 76 LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS--G 133
L +++ A + N L+QG+ VH I + DS + MYA CG + F
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 134 MHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
+ + WN+I+S + N + L ++ +M G D + V A L
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
+ LG + + +V+ +SLI Y + G I+ + F + KD V WN +++G+A
Sbjct: 158 DFLSDTVSSLGMDCNEFVA--SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 254 LNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDL 313
G + M+ M + P+ T ++S+CA LL+ G +HG + + ++
Sbjct: 216 KCGALDSVIKGFSVMR-MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 314 LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML- 360
+ NSL+ YSK A LF ++ D V+WN MISG F EM+
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 361 --YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
L +FS+LL PS + E+LE+ K IHC+ ++ S + +AL+ Y C
Sbjct: 334 SGVLPDAITFSSLL---PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
+ A ++ + ++ D + +I NG + ++++ F+ + + + SP+ +TLV+++
Sbjct: 391 VSMAQNIFSQ-CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSIL 448
Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTR--VQNALITMYGRCRDIKSASTVFESCYNCN 536
G L G+ LHG +K G D R + A+I MY +C + A +FE +
Sbjct: 449 PVIGILLALKLGRELHGFIIKK--GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEP---NEISIVSILSACTQLGVLRHGKQIHG 593
+ +WN MI+ +Q+ A+++FR + + +SI + LSAC L GK IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWE 638
+ + + S L+DMY+ C K+ +W+S+I+A G HGK +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 639 AIELFHEMC-NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
++ LFHEM SGIRP + + + ++S+C H G VDEG++++ +M E+Y ++P+ EH+ C+
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
VD+ GR+G+L EAYE +K++P P GVWG +L AC H + ++ + + L L+P N
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNS 746
Query: 758 GYYISLSNMYVALGRWKDAVEI 779
GYY+ +SN + W+ ++
Sbjct: 747 GYYVLISNAHANAREWESVTKV 768
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 153/644 (23%), Positives = 293/644 (45%), Gaps = 65/644 (10%)
Query: 9 TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
++SL+ AY + LF KD V WN M+ + + + F M +
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
I ++ T ++S + G +H L + +G+ + S+ N ++MY+KCG + +
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F M ADTV+WN ++SG + + E+ L +F EM SG D ++ SS + + +
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
L Y K IH ++ + S + +T++LI Y +C + A+ F DVV + A+
Sbjct: 355 NLEYCKQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I G+ NG + ++ ++ + ++ + P+ T+V+++ + L L+ GR +HG+ I++
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLF 356
+ +++D Y+K ++ A +F ++ D+VSWNSMI+ +F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINC 416
++M + ++ A L +C + S FGK+IH + +K +++ + L+ MY C
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 417 GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVN 476
G+L AA ++ + + + S WN +I AC +G ++++ F M ++ PD +T +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 477 VISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN 536
+IS+C ++ EG R ++ YG I+
Sbjct: 650 IISSCCHVGDVDEG---------------VRFFRSMTEDYG----IQPQQE--------- 681
Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
+ C++ F + A E + + F P+ ++L AC
Sbjct: 682 --HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR---------------L 724
Query: 597 HLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAI 640
H + SS L+D+ SN+ + +IS + + WE++
Sbjct: 725 HKNVELAEVASSKLMDLD---PSNSGYYVLISNAHANAREWESV 765
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 1/194 (0%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
+GF +++ Y+ + +F +D+V+WN+MIT C ++ +
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F +M GI +D ++ +SA + G+ +H IK + +D + ++MYAK
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAK 589
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
CG+L ++ F M + VSWN+I++ C ++ + L F EM SG + D ++
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLE 649
Query: 180 AVAASACLGELSYG 193
+++ +G++ G
Sbjct: 650 IISSCCHVGDVDEG 663
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 230/792 (29%), Positives = 397/792 (50%), Gaps = 95/792 (11%)
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
G D L +V A ++ L GR +H K G IA S + +NMYAKC ++
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC- 186
+ F M D V WN +++G L + + + +F+ M ++ E + S++ A+ C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPS-SVTFAIVLPLCV 133
Query: 187 -LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-EAAERAFWGMTCKDVVS 244
LG+ GK +H+ IK G E V N+L+SMY++ G I A AF G+ KDVVS
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVG--NALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA---DSLLLREGRSVH 301
WNAII GF+ N +AF M L EP+ AT+ ++ +CA ++ R GR +H
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLM-LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 302 GYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
Y ++R L + + NSL+ FY + + +A LF + DLVSWN +I+G
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS-KDLVSWNVVIAGYASNCE 309
Query: 355 ------LFKEMLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLKLGF--SNNTIG 405
LF +++ S T+++ILP C L GK IH + L+ + + ++G
Sbjct: 310 WFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG 369
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK-----S 460
NAL+ Y GD AA+ +S D WN ++ A F ++ K F+
Sbjct: 370 -NALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDA------FADSPKQFQFLNLLH 421
Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLD---TRVQNALITMYG 517
+ + DSVT+++++ C N++ + K +HG ++K+ + D ++ NAL+ Y
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 518 RCRDIKSASTVFES--------CYN------------------------CNLCTWNCMIS 545
+C +++ A +F YN +L TW+ M+
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQE 602
++++ A+ +FR ++ PN ++I+++L C QL L +Q HG++ G +
Sbjct: 542 IYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD 601
Query: 603 NSFISSALLDMYSNC----------KSNAA-----WSSMISAYGYHGKGWEAIELFHEMC 647
+ LLD+Y+ C +S+A +++M++ Y HG+G EA+ ++ M
Sbjct: 602 IR-LKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT 660
Query: 648 NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKL 707
S I+P + ++L+AC H+GL+ +GLQ Y+++ + ++P E + C VD++ R G+L
Sbjct: 661 ESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRL 720
Query: 708 QEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMY 767
+AY F+ +P++P +WG +L AC+ + +G VA L + E ++ G ++ +SNMY
Sbjct: 721 DDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMY 780
Query: 768 VALGRWKDAVEI 779
A +W+ +E+
Sbjct: 781 AADAKWEGVMEL 792
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 190/777 (24%), Positives = 353/777 (45%), Gaps = 93/777 (11%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G +A S S+L Y+ + +F + + D V WN ++T + C + FF
Sbjct: 51 GHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFF 109
Query: 62 GEM-VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
M + + S T I++ ++ G+ +H IKAG+ D+ + N V+MYAK
Sbjct: 110 KAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAK 169
Query: 121 CGDLNSSECT-FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
G + T F G+ D VSWN I++G NN F M + + ++++
Sbjct: 170 FGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIAN 229
Query: 180 AVAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
+ A + + G+ IH+ ++ + + +V V NSL+S Y + G IE A F
Sbjct: 230 VLPVCASMDKNIACRSGRQIHSYVVQRSWLQT-HVFVCNSLVSFYLRVGRIEEAASLFTR 288
Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
M KD+VSWN +I G+A N ++ +AF L H + V PD T+++++ +CA L
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 297 GRSVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL 355
G+ +H Y +R L D + N+L+ FY++ S A F+ ++ D++SWN+++
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDAF 407
Query: 356 FKEMLYLCSQFSFS----------------TLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
QF F T+L++L C + + + K +H + +K G
Sbjct: 408 ADSP----KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGL 463
Query: 400 SNN----TIGVNALMHMYINCGDLVAA----FSLLQR---ISHNS--------------- 433
++ +G NAL+ Y CG++ A L +R +S+NS
Sbjct: 464 LHDEEEPKLG-NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQ 522
Query: 434 ---------DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
D + W++++ ++ EAI F+ + Q + P++VT++N++ C L
Sbjct: 523 MLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREI-QARGMRPNTVTIMNLLPVCAQL 581
Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
+ HG ++ +G D R++ L+ +Y +C +K A +VF+S +L + M+
Sbjct: 582 ASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMV 640
Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
+ ++ + AL ++ H+ +P+ + I ++L+AC G+++ G QI+ +
Sbjct: 641 AGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI------ 694
Query: 602 ENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISL 661
+ M + A +I+ +G + + + + P + +L
Sbjct: 695 ------RTVHGMKPTMEQYACAVDLIA------RGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 662 LSACSHSGLVDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
L AC+ +D G N++L+ E D +T +HV I +M K + E ++NL
Sbjct: 743 LRACTTYNRMDLGHSVANHLLQAESD---DTGNHVLISNMYAADAKWEGVME-LRNL 795
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 206/441 (46%), Gaps = 44/441 (9%)
Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL--MMNSLMD 321
+ +L+ D + ++ CA L GR++HG + LG+ + S+++
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFK--LGHIACSEVSKSVLN 64
Query: 322 FYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----------FKEMLYLCSQFSFST 370
Y+K + + +F + + D V WN +++GL FK M + S
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSL-DPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSV 123
Query: 371 LLAI-LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA-AFSLLQR 428
AI LP C GKS+H + +K G +T+ NAL+ MY G + A++
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 429 ISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF 488
I+ + D WN +I ++N +A ++F M ++ P+ T+ NV+ C +++
Sbjct: 184 IA-DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVCASMDKNI 241
Query: 489 ---EGKSLHGLAL-KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
G+ +H + +S + V N+L++ Y R I+ A+++F + +L +WN +I
Sbjct: 242 ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVI 301
Query: 545 SAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-HLG 599
+ ++ N +A +LF +L + P+ ++I+SIL C QL L GK+IH ++ H
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 600 FQENSFISSALLDMYSNCKSNAA---------------WSSMISAYGYHGKGWEAIELFH 644
E++ + +AL+ Y+ +A W++++ A+ K ++ + L H
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLH 421
Query: 645 EMCNSGIRPTKSSVISLLSAC 665
+ N I +++SLL C
Sbjct: 422 HLLNEAITLDSVTILSLLKFC 442
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RG L + +LL Y+ + + ++F +D+V + AM+ + L
Sbjct: 596 RGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMI 655
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG-RVVHCLSIKAGMIADSSLCNVFVNMYA 119
+ M E I+ D + +++A ++ G ++ + GM V++ A
Sbjct: 656 YSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIA 715
Query: 120 KCGDLNSSECTFSGMHCADTVS-WNTIMSGCLHNN 153
+ G L+ + + M + W T++ C N
Sbjct: 716 RGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYN 750
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 320/614 (52%), Gaps = 39/614 (6%)
Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
HA I G+ + +S+ L S G I A F + DV +N ++ GF++N
Sbjct: 40 HAQIILHGFRND--ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
+ + ++ ++P+ +T IS + R GR +HG A+ +LL+
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL-------------C 363
++++ Y K + A +F+ + P D + WN+MISG K +Y+ C
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRM-PEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 364 SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAF 423
++ +TLL ILP+ + L G IH K G ++ + + +Y CG +
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 424 SLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGN 483
+L + D +N +I T NG + ++ FK + A S TLV+++ G+
Sbjct: 277 ALFREF-RKPDIVAYNAMIHGYTSNGETELSLSLFKEL-MLSGARLRSSTLVSLVPVSGH 334
Query: 484 LELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCM 543
L L + ++HG LKS V AL T+Y + +I+SA +F+ +L +WN M
Sbjct: 335 LMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 544 ISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGF 600
IS ++QN A+ LFR + EF PN ++I ILSAC QLG L GK +H V F
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF 451
Query: 601 QENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHE 645
+ + ++S+AL+ MY+ C K+ W++MIS YG HG+G EA+ +F+E
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
M NSGI PT + + +L ACSH+GLV EG + +N+M+ Y P +H+ C+VD+LGR+G
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSN 765
LQ A +FI+ + I+P VW +L AC H DT + + V+E LF+L+P+NVGY++ LSN
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSN 631
Query: 766 MYVALGRWKDAVEI 779
++ A + A +
Sbjct: 632 IHSADRNYPQAATV 645
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 257/598 (42%), Gaps = 65/598 (10%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + T L S++ + +F DV +N ++ N L F
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 62 GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
+ + ++ +S+T +SA + + GRV+H ++ G ++ L + V MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREM-GWSGEQADNVSLSS 179
+ + F M DT+ WNT++SG N + + FR++ S + D +L
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+ A A L EL G IH+L K G Y V IS+YS+CG I+ F
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDY--VLTGFISLYSKCGKIKMGSALFREFRK 284
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQL----MRSVEPDIATVVTLISLCADSLLLR 295
D+V++NA+I G+ NG+ E + L E+ L +RS +T+V+L+ + +L+
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS-----STLVSLVPVSGHLMLI- 338
Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG- 354
++HGY ++ + +L YSK N + A LF+ +P L SWN+MISG
Sbjct: 339 --YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SPEKSLPSWNAMISGY 395
Query: 355 -----------LFKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQLKLGFSN 401
LF+EM S+FS + T+ IL +C +L GK +H F +
Sbjct: 396 TQNGLTEDAISLFREMQK--SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
+ AL+ MY CG + A L ++ ++ + WN +I +G QEA+ F M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGLHGQGQEALNIFYEM 512
Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
+P VT + V+ AC + L EG + N++I YG
Sbjct: 513 L-NSGITPTPVTFLCVLYACSHAGLVKEGDEIF---------------NSMIHRYG---- 552
Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSAC 579
+ ++ + CM+ + RAL+ + EP ++L AC
Sbjct: 553 -----------FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 318/597 (53%), Gaps = 34/597 (5%)
Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL 270
V ++ L+++Y G++ A F + +DV +WN +I G+ G E L
Sbjct: 86 VCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 145
Query: 271 MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
+ PD T +++ C + +G +H A++ +D+ + SL+ YS+ ++
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 331 KAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCS---QFSFSTLLAILPSCNSPE 382
A +LF+ + P+ D+ SWN+MISG KE L L + T++++L +C
Sbjct: 203 NARILFDEM-PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG 261
Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
G +IH + +K G + N L+ +Y G L + R+ + D WN +I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWNSII 320
Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
A N AI F+ M + PD +TL+++ S L +S+ G L+
Sbjct: 321 KAYELNEQPLRAISLFQEM-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 503 GL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR 561
L D + NA++ MY + + SA VF N ++ +WN +IS ++QN A+E++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 562 HLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
+E E N+ + VS+L AC+Q G LR G ++HG + G + F+ ++L DMY C
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 618 K---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
++ W+++I+ +G+HG G +A+ LF EM + G++P + ++LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
SACSHSGLVDEG + M +Y + P +H+ C+VDM GR+G+L+ A +FIK++ +QP
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
+WGA+LSAC HG+ +GK +E LF++EPE+VGY++ LSNMY + G+W+ EI
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 188/666 (28%), Positives = 319/666 (47%), Gaps = 63/666 (9%)
Query: 89 LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
L+ + +H + + I + + VN+Y G++ + TF + D +WN ++SG
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 149 CLH-NNYPE--KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGY 205
N E +C F M SG D + S + A + + G IH L +K G+
Sbjct: 127 YGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGF 181
Query: 206 EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLL 265
YV+ SLI +YS+ + A F M +D+ SWNA+I G+ +G +EA L
Sbjct: 182 MWDVYVAA--SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
+ ++ M SV TVV+L+S C ++ G ++H Y+I+ L +L + N L+D Y++
Sbjct: 240 NGLRAMDSV-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMISG--LFKEMLYLCSQFSFSTLLAILPSCNSPES 383
L + +F+ + + DL+SWNS+I L ++ L S F L I P C + S
Sbjct: 295 FGRLRDCQKVFDRMY-VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 384 L-----EFG-----KSIHCWQLKLGF--SNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
L + G +S+ + L+ G+ + TIG NA++ MY G + +A ++ +
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIG-NAVVVMYAKLGLVDSARAVFNWLP- 411
Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
N+D WN +I QNG EAI+ + M ++ + + T V+V+ AC +G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
LHG LK+ + LD V +L MYG+C ++ A ++F N WN +I+ +
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISS 608
+A+ LF+ + E P+ I+ V++LSAC+ G++ G+ F + Q + I+
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW----CFEM-MQTDYGITP 586
Query: 609 ALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
+L + M+ YG G+ A++ M ++P S +LLSAC
Sbjct: 587 SL----------KHYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVH 633
Query: 669 GLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQEAYEFIKNLP----IQPKP 723
G VD G ++ E V PE +HV + +M +GK E + I+++ ++ P
Sbjct: 634 GNVDLGKIASEHLFE---VEPEHVGYHVLLSNMYASAGKW-EGVDEIRSIAHGKGLRKTP 689
Query: 724 GVWGAM 729
G W +M
Sbjct: 690 G-WSSM 694
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 173/647 (26%), Positives = 293/647 (45%), Gaps = 93/647 (14%)
Query: 30 FYETCNKDVVTWNAMITA---CVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQM 86
F N+DV WN MI+ + V+ F M+ G+ D T S L
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTF---PSVLKAC 163
Query: 87 NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM 146
+ G +HCL++K G + D + +++Y++ + ++ F M D SWN ++
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 147 SG-CLHNNYPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL 203
SG C N E L R M D+V++ S ++A G+ + G IH+ IK
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 204 GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFD 263
G E +VS N LI +Y++ G + ++ F M +D++SWN+II + LN + A
Sbjct: 277 GLESELFVS--NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 264 LLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLM 320
L EM+L R ++PD T+++L S+ + +R RSV G+ +R+ G+ D+ + N+++
Sbjct: 335 LFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRK--GWFLEDITIGNAVV 391
Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--------EMLYLCSQ-----FS 367
Y+K + A +FN + P D++SWN++ISG + EM + + +
Sbjct: 392 VMYAKLGLVDSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 368 FSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
T +++LP+C+ +L G +H LK G + V +L MY CG L A SL
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
+I ++ WN +I +GH ++A+ FK M + PD +T V ++SAC + L
Sbjct: 511 QIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEML-DEGVKPDHITFVTLLSACSHSGLV 568
Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
EG+ + + T YG +K + CM+ +
Sbjct: 569 DEGQWCFEM---------------MQTDYGITPSLKH---------------YGCMVDMY 598
Query: 548 SQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVF-----HLGFQE 602
+ AL+ + + +P+ ++LSAC G + GK H+F H+G+
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH- 657
Query: 603 NSFISSALLDMYSNCKSNAAWSSMISAYGY-HGK------GWEAIEL 642
L +MY+ S W + HGK GW ++E+
Sbjct: 658 -----VLLSNMYA---SAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 255/531 (48%), Gaps = 32/531 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF+ + + SL+ YS ++ LF E +D+ +WNAMI+ ++ L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL--- 236
Query: 62 GEMVEEGIR-FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
+ G+R DS T++ ++SA T+ +G +H SIK G+ ++ + N +++YA+
Sbjct: 237 --TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
G L + F M+ D +SWN+I+ N P + + F+EM S Q D ++L S
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 181 VAASACLGELSYGKVIHALGIKLGY--EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
+ + LG++ + + ++ G+ ED +++ N+++ MY++ G +++A F +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLED---ITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
DV+SWN II G+A NG EA ++ + M+ + + T V+++ C+ + LR+G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
+HG ++ L D+ ++ SL D Y K L A LF I +N V WN++I+
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS-VPWNTLIACHGFH 530
Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGK-SIHCWQLKLGFSNNTIG 405
LFKEML + T + +L +C+ ++ G+ Q G + +
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQ 464
++ MY G L A ++ +S D S W ++ AC +G+ I + +
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSL-HGLALK-----SLMGLDTRVQ 509
V L N+ ++ G E E +S+ HG L+ S M +D +V+
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 701
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 332 bits (852), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 245/864 (28%), Positives = 397/864 (45%), Gaps = 112/864 (12%)
Query: 18 SNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLL 77
+ VSY E ++ KDV WN+M++ L F + E I + T
Sbjct: 109 AQVSYAEKQ----FDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 78 IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
I++S + ++ GR +HC IK G+ +S V+MYAKC ++ + F +
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL------- 190
+TV W + SG + PE+ +L F M G + D+++ + + LG+L
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 191 --------------------------------------------SYGKVIHALGI----- 201
+ G V+ A+GI
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 202 ----------KLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
KLG + YV +SL+SMYS+C +EAA + F + K+ V WNA+I G
Sbjct: 345 LGLVVHAEAIKLGLASNIYVG--SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
+A NG+ + +L +M+ D T +L+S CA S L G H I++ L
Sbjct: 403 YAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
+L + N+L+D Y+K +L A +F + D V+WN++I LFK M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 360 LYLCSQFSFSTLLA-ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
LC S LA L +C L GK +HC +K G + ++L+ MY CG
Sbjct: 521 -NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
+ A + + S S N +I +QN + +EA+ F+ M + +P +T ++
Sbjct: 580 IKDARKVFSSLPEWSVVS-MNALIAGYSQN-NLEEAVVLFQEML-TRGVNPSEITFATIV 636
Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQN-ALITMYGRCRDIKSASTVF-ESCYNCN 536
AC E G HG K + +L+ MY R + A +F E +
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 537 LCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHG 593
+ W M+S SQN AL+ ++ + + P++ + V++L C+ L LR G+ IH
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 594 HVFHLGFQENSFISSALLDMYSNC---------------KSN-AAWSSMISAYGYHGKGW 637
+FHL + S+ L+DMY+ C +SN +W+S+I+ Y +G
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 638 EAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI 697
+A+++F M S I P + + + +L+ACSH+G V +G + + M+ +Y + +H C+
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 698 VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENV 757
VD+LGR G LQEA +FI+ ++P +W ++L AC HGD G+ AE L +LEP+N
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
Y+ LSN+Y + G W+ A + K
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRK 960
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 275/596 (46%), Gaps = 29/596 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G +++ +SL++ YS E++ +F K+ V WNAMI N + F
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M G D T ++S + L+ G H + IK + + + N V+MYAKC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G L + F M D V+WNTI+ + + + F+ M G +D L+S +
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A + L GK +H L +K G + + +SLI MYS+CG I+ A + F +
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTG--SSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
VVS NA+I G++ N EEA L EM L R V P T T++ C L G H
Sbjct: 595 VVSMNALIAGYSQN-NLEEAVVLFQEM-LTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 302 GYAIRRLLGYDLLMMN-SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
G +R + + SL+ Y S +++A LF+ ++ +V W M+SG
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGF 712
Query: 355 ------LFKEMLY---LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
+KEM + L Q +F T+L + C+ SL G++IH L + +
Sbjct: 713 YEEALKFYKEMRHDGVLPDQATFVTVLRV---CSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
N L+ MY CGD+ + + + S+ WN +I +NG+ ++A+K F SM +Q
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM-RQS 828
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA--LITMYGRCRDIK 523
+ PD +T + V++AC + +G+ + + + G++ RV + ++ + GR ++
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY-GIEARVDHVACMVDLLGRWGYLQ 887
Query: 524 SASTVFESC-YNCNLCTWNCMISAFSQNKAEVRA-LELFRHLEFEPNEISIVSILS 577
A E+ + W+ ++ A + ++R + + +E EP S +LS
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 171/683 (25%), Positives = 295/683 (43%), Gaps = 81/683 (11%)
Query: 89 LKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG 148
L+ G+ VH S+ G+ ++ L N V++YAKC ++ +E F + D +WN+++S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 149 CLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDS 208
P K L F + + + + S ++ A + +G+ IH IK+G E +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEM 268
Y +L+ MY++C I A R F + + V W + G+ G EEA L+ E
Sbjct: 195 SYCG--GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV-LVFER 251
Query: 269 QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNS 328
PD VT+I+ Y +
Sbjct: 252 MRDEGHRPDHLAFVTVINT-----------------------------------YIRLGK 276
Query: 329 LSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILP 376
L A LLF ++ D+V+WN MISG F M + + STL ++L
Sbjct: 277 LKDARLLFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 377 SCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTS 436
+ +L+ G +H +KLG ++N ++L+ MY C + AA + + + +D
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV- 394
Query: 437 CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG---NLELAFEGKSL 493
WN +I NG + ++ F M + + D T +++S C +LE+ G
Sbjct: 395 FWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEM---GSQF 450
Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
H + +K + + V NAL+ MY +C ++ A +FE + + TWN +I ++ Q++ E
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 554 VRALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
A +LF+ + + + S L ACT + L GKQ+H G + S+L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 611 LDMYSNC----------KSNAAWS-----SMISAYGYHGKGWEAIELFHEMCNSGIRPTK 655
+DMYS C S WS ++I+ Y + EA+ LF EM G+ P++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSE 629
Query: 656 SSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQEAYEFI 714
+ +++ AC + G Q++ + + E E+ + ++ M S + EA
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 715 KNLPIQPKPGVWGAMLSACSHHG 737
L +W M+S S +G
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNG 711
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 210/463 (45%), Gaps = 82/463 (17%)
Query: 291 SLLLREGRSVHGYAIRRLLGYDL--LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
+L LR G++VH ++ +LG D + N+++D Y+K +S AE F+ + D+ +W
Sbjct: 73 ALALRIGKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAW 128
Query: 349 NSMIS----------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC 392
NSM+S LF+ ++ ++F+FS +L +C ++EFG+ IHC
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSI---VLSTCARETNVEFGRQIHC 184
Query: 393 WQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
+K+G N+ AL+ MY C + A + + I + +T CW + + G +
Sbjct: 185 SMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV-DPNTVCWTCLFSGYVKAGLPE 243
Query: 453 EAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNAL 512
EA+ F+ M + + PD + V VI+
Sbjct: 244 EAVLVFERM-RDEGHRPDHLAFVTVINT-------------------------------- 270
Query: 513 ITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNE 569
Y R +K A +F + ++ WN MIS + E A+E F R +
Sbjct: 271 ---YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 570 ISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------ 617
++ S+LSA + L G +H LG N ++ S+L+ MYS C
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 618 ---KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
K++ W++MI Y ++G+ + +ELF +M +SG + SLLS C+ S ++ G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNL 717
Q+++ ++++ + + +VDM + G L++A + + +
Sbjct: 448 SQFHSIIIKKKLAKNLFVGN-ALVDMYAKCGALEDARQIFERM 489
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 138/315 (43%), Gaps = 34/315 (10%)
Query: 490 GKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
GK++H +L ++G+D+ R+ NA++ +Y +C + A F+ ++ WN M+S +
Sbjct: 79 GKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMY 135
Query: 548 SQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
S + L F L FE PN+ + +LS C + + G+QIH + +G + N
Sbjct: 136 SSIGKPGKVLRSFVSL-FENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 604 SFISSALLDMYSNCK---------------SNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
S+ AL+DMY+ C + W+ + S Y G EA+ +F M +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQ 708
G RP + +++++ G + + + M P+ ++ G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-----SSPDVVAWNVMISGHGKRGCET 309
Query: 709 EAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE-PENVGYYISLS 764
A E+ N+ ++ G++LSA + +G V KL N+ SL
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 765 NMYVALGRWKDAVEI 779
+MY + + A ++
Sbjct: 370 SMYSKCEKMEAAAKV 384
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------KSNAAWSSMISAY 630
LR GK +H LG + +A++D+Y+ C K AW+SM+S Y
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMY 135
Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
GK + + F + + I P K + +LS C+ V+ G Q + +M+ + +
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI-KMGLERN 194
Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMG-KQVAELL 749
+ +VDM + ++ +A + + + P W + S G K G + A L+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFS-----GYVKAGLPEEAVLV 248
Query: 750 FKL------EPENVGYYISLSNMYVALGRWKDA 776
F+ P+++ ++++ N Y+ LG+ KDA
Sbjct: 249 FERMRDEGHRPDHLA-FVTVINTYIRLGKLKDA 280
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 341/637 (53%), Gaps = 40/637 (6%)
Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
D + S + A A L LS+G IH + G+ Y+S +SL+++Y++ G + A +
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS--SSLVNLYAKFGLLAHARK 102
Query: 233 AFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSL 292
F M +DVV W A+I ++ G EA L++EM+ + ++P VTL+ + + L
Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF-QGIKPG---PVTLLEMLSGVL 158
Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
+ + + +H +A+ D+ +MNS+++ Y K + + A+ LF+ + D+VSWN+MI
Sbjct: 159 EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQM-EQRDMVSWNTMI 217
Query: 353 SGL-----FKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFS 400
SG E+L L + T A L + LE G+ +HC +K GF
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFD 277
Query: 401 NNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKS 460
+ AL+ MY+ CG A++ +L+ I N D CW ++I + G ++A+ F
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIP-NKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 461 MTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCR 520
M Q + S + +V+++C L G S+HG L+ LDT N+LITMY +C
Sbjct: 337 MLQS-GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 521 DIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEP----NEISIVSIL 576
+ + +FE +L +WN +IS ++QN +AL LF ++F+ + ++VS+L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNA 621
AC+ G L GK IH V + S + +AL+DMYS C K
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 622 AWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
+W +I+ YG+HGKG A+E++ E +SG+ P +++LS+CSH+G+V +GL+ +++M
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 682 LEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKM 741
+ ++ V P EH C+VD+L R+ ++++A++F K +P V G +L AC +G T++
Sbjct: 576 VRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEV 635
Query: 742 GKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVE 778
+ E + +L+P + G+Y+ L + + A+ RW D E
Sbjct: 636 EDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 244/525 (46%), Gaps = 35/525 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + S+SL+ Y+ + +F E +DVV W AMI V
Sbjct: 76 GFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLV 135
Query: 62 GEMVEEGIRFDSTTLLIIVSA---LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMY 118
EM +GI+ TLL ++S +TQ+ CL H ++ G D ++ N +N+Y
Sbjct: 136 NEMRFQGIKPGPVTLLEMLSGVLEITQLQCL------HDFAVIYGFDCDIAVMNSMLNLY 189
Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH-NNYPEKCLLYFREMGWSGEQADNVSL 177
KC + ++ F M D VSWNT++SG N E L +R G G + D +
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTF 248
Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
++++ S + +L G+++H +K G++ ++ +LI+MY +CG EA+ R +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETI 306
Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
KDVV W +I G G+ E+A + EM L + + ++++ CA G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEM-LQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--- 354
SVHGY +R D +NSL+ Y+K L K+ ++F + DLVSWN++ISG
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-RDLVSWNAIISGYAQ 424
Query: 355 ---------LFKEMLY-LCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTI 404
LF+EM + Q T++++L +C+S +L GK IHC ++ ++
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 405 GVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
AL+ MY CG L AA IS D W I+I +G A++ +
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFL-H 542
Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ 509
P+ V + V+S+C + G GL + S M D V+
Sbjct: 543 SGMEPNHVIFLAVLSSCSH-----NGMVQQGLKIFSSMVRDFGVE 582
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 218/464 (46%), Gaps = 22/464 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMIT--ACVENRCVVMGLH 59
GF + S+L Y + + LF + +D+V+WN MI+ A V N ++ L
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 60 FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
+ M +G+R D T +S M L+ GR++HC +K G D L + MY
Sbjct: 234 Y--RMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYL 291
Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
KCG +S + D V W ++SG + EK L+ F EM SG + +++S
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 180 AVAASACLGELSYGKVIHALGIKLGYE-DSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
VA+ A LG G +H ++ GY D+P + NSLI+MY++CG ++ + F M
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL---NSLITMYAKCGHLDKSLVIFERMN 408
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
+D+VSWNAII G+A N +A L EM+ + D TVV+L+ C+ + L G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
+H IR + L+ +L+D YSK L A+ F++I+ D+VSW +I+G
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFH 527
Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIG 405
++ E L+ + + LA+L SC+ ++ G I ++ G N
Sbjct: 528 GKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEH 587
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNG 449
+ ++ + + AF + I++ AC NG
Sbjct: 588 LACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 139/317 (43%), Gaps = 26/317 (8%)
Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLH 494
T +N I + +G ++ + TF SM + PD+ T +++ AC +L+ G S+H
Sbjct: 11 TKYFNSHINHLSSHGDHKQVLSTFSSMLANK-LLPDTFTFPSLLKACASLQRLSFGLSIH 69
Query: 495 GLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEV 554
L + D + ++L+ +Y + + A VFE ++ W MI +S+
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 555 RALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALL 611
A L + F+ P ++++ +LS ++ L + +H GF + + +++L
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSML 186
Query: 612 DMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
++Y C + +W++MIS Y G E ++L + M G+RP +
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCIVDMLGRSGKLQEAYEFIK 715
+ + LS ++ G + +++ +DV + ++ M + GK + +Y ++
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEEASYRVLE 304
Query: 716 NLPIQPKPGVWGAMLSA 732
+P W M+S
Sbjct: 305 TIP-NKDVVCWTVMISG 320
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 240/815 (29%), Positives = 400/815 (49%), Gaps = 51/815 (6%)
Query: 12 SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF 71
+L+ AY S+ +F E ++ V+W +++ N L F +MV+EGI
Sbjct: 41 NLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS 100
Query: 72 DSTTLLIIVSALTQMNCLKQ--GRVVHCLSIKAGMIADSSLCNVFVNMYAKC-GDLNSSE 128
+ + ++ A ++ + GR +H L K D+ + NV ++MY KC G + +
Sbjct: 101 NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYAL 160
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
C F + ++VSWN+I+S F M + G + + S V + L
Sbjct: 161 CAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220
Query: 189 E--LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
E + + I K G +V + L+S +++ G + A + F M ++ V+ N
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVG--SGLVSAFAKSGSLSYARKVFNQMETRNAVTLN 278
Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISL----CADSLLLREGRSVHG 302
++ G EEA L +M M V P+ + V+ L S A+ + L++GR VHG
Sbjct: 279 GLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEVGLKKGREVHG 337
Query: 303 YAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLY 361
+ I L+ + + + N L++ Y+K S++ A +F + D VSWNSMI+GL + +
Sbjct: 338 HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCF 396
Query: 362 LCSQFSFS------------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNAL 409
+ + + TL++ L SC S + + G+ IH LKLG N NAL
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH-FQEAIKTFKSMTQQQNAS 468
M +Y G L + + + S WN +I A ++ EA+ F + Q+
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGALARSERSLPEAVVCFLN-AQRAGQK 514
Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
+ +T +V+SA +L GK +HGLALK+ + + +NALI YG+C ++ +
Sbjct: 515 LNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKI 574
Query: 529 FES-CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEIS---IVSILSACTQLGV 584
F + TWN MIS + N+ +AL+L + + ++LSA +
Sbjct: 575 FSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVAT 634
Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISA 629
L G ++H + + + SAL+DMYS C +++ +W+SMIS
Sbjct: 635 LERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISG 694
Query: 630 YGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
Y HG+G EA++LF M G P + + +LSACSH+GL++EG +++ +M + Y +
Sbjct: 695 YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLA 754
Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK--MGKQVA 746
P EH C+ D+LGR+G+L + +FI+ +P++P +W +L AC K +GK+ A
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAA 814
Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
E+LF+LEPEN Y+ L NMY A GRW+D V+ K
Sbjct: 815 EMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 201/722 (27%), Positives = 336/722 (46%), Gaps = 63/722 (8%)
Query: 93 RVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHN 152
R H K + D LCN +N Y + GD S+ F M + VSW I+SG N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 153 NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS--YGKVIHALGIKLGYEDSPY 210
++ L++ R+M G ++ + S + A +G + +G+ IH L KL Y
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 211 VSVTNSLISMYSQC-GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ 269
VS N LISMY +C G + A AF + K+ VSWN+II ++ G AF + MQ
Sbjct: 141 VS--NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 270 L--MRSVEPDIATVVTLI-SLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKS 326
R E ++VT SL + L E + + L DL + + L+ ++KS
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 327 NSLSKAELLFNAIAPMNDLV-----------SWNSMISGLFKEM--LYLCSQFSFSTLLA 373
SLS A +FN + N + W + LF +M + S S+ LL+
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 374 ILPSCNSPES--LEFGKSIHCWQLKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRIS 430
P + E L+ G+ +H + G + +G+ N L++MY CG + A + ++
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 431 HNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
+ D+ WN +I QNG F EA++ +KSM ++ + P S TL++ +S+C +L+ A G
Sbjct: 377 -DKDSVSWNSMITGLDQNGCFIEAVERYKSM-RRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 491 KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQN 550
+ +HG +LK + L+ V NAL+T+Y + +F S + +WN +I A +++
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 551 KAEV-RALELFRHLEF---EPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI 606
+ + A+ F + + + N I+ S+LSA + L GKQIHG + +
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 607 SSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG 650
+AL+ Y C + N W+SMIS Y ++ +A++L M +G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 651 IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCI----VDMLGRSGK 706
R ++LSA + ++ G++ + VR E V + VDM + G+
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGME-----VHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLE----PENVGYYIS 762
L A F +P++ W +M+S + HG + ++ E + KL+ P++V +
Sbjct: 670 LDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEALKLFETM-KLDGQTPPDHVTFVGV 727
Query: 763 LS 764
LS
Sbjct: 728 LS 729
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 175/354 (49%), Gaps = 5/354 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLHF 60
G ++ S +L+T Y+ Y +F D V+WN++I A + R + +
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F G + + T ++SA++ ++ + G+ +H L++K + +++ N + Y K
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564
Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
CG+++ E FS M D V+WN+++SG +HN K L M +G++ D+ ++
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
++A A + L G +HA ++ E V V ++L+ MYS+CG ++ A R F M
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESD--VVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG-R 298
++ SWN++I G+A +G+ EEA L M+L PD T V ++S C+ + LL EG +
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
+ L + + + D ++ L K E + +++ W +++
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 213/678 (31%), Positives = 342/678 (50%), Gaps = 51/678 (7%)
Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFRE---MGWSGEQADNVSLSSAVAASACLGELSYGKV 195
T S N +S L N P + L F+E +G+ G D V+L +A AC G+L G
Sbjct: 40 TTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTL--CLALKACRGDLKRGCQ 97
Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
IH G+ + +V V+N+++ MY + G + A F + DVVSWN I+ GF N
Sbjct: 98 IHGFSTTSGF--TSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN 155
Query: 256 GKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM 315
+ A + + M+ V D T T +S C S G + ++ L DL++
Sbjct: 156 ---QIALNFVVRMK-SAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 316 MNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-------------FKEMLYL 362
NS + YS+S S A +F+ ++ D++SWNS++SGL F++M+
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
+ + +++ +C L+ + IH +K G+ + N LM Y CG L A
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
S+ ++S + S W +I + + +A+ F +M + P+ VT V +I+A
Sbjct: 331 KSVFHQMSERNVVS-WTTMI-----SSNKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVK 383
Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
E EG +HGL +K+ + V N+ IT+Y + ++ A FE + +WN
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 543 MISAFSQNKAEVRALELFRHLEFE--PNEISIVSILSACT--QLGVLRHGKQIHGHVFHL 598
MIS F+QN AL++F E PNE + S+L+A + ++ G++ H H+ L
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503
Query: 599 GFQENSFISSALLDMYS---------------NCKSNAAWSSMISAYGYHGKGWEAIELF 643
G +SSALLDMY+ + K+ W+S+ISAY HG + LF
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
H+M + P + +S+L+AC+ G+VD+G + +N M+E Y++ P EH+ C+VDMLGR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISL 763
+G+L+EA E + +P P + +ML +C HG+ KMG +VAEL +++PE G Y+ +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683
Query: 764 SNMYVALGRWKDAVEIGK 781
N+Y W A EI K
Sbjct: 684 YNIYAEKEEWDKAAEIRK 701
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 178/642 (27%), Positives = 299/642 (46%), Gaps = 58/642 (9%)
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
G D TL + + A LK+G +H S +G + + N + MY K G +++
Sbjct: 73 GRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNA 130
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
C F + D VSWNTI+SG N + L + M +G D + S+A+ S C+
Sbjct: 131 LCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTAL--SFCV 185
Query: 188 GELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSW 245
G + G + + +K G E + V NS I+MYS+ G A R F M+ KD++SW
Sbjct: 186 GSEGFLLGLQLQSTVVKTGLESD--LVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 246 NAIIDGFALNGKFE-EAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
N+++ G + G F EA + +M + VE D + ++I+ C L+ R +HG
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLC 302
Query: 305 IRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYL 362
I+R GY+ L+ N LM YSK L + +F+ ++ N +VSW +MIS + + +
Sbjct: 303 IKR--GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN-VVSWTTMISSNKDDAVSI 359
Query: 363 CSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F T + ++ + E ++ G IH +K GF + N+ + +Y
Sbjct: 360 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
L A + I+ S WN +I QNG EA+K F S + P+ T
Sbjct: 420 FEALEDAKKAFEDITFREIIS-WNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYTFG 476
Query: 476 NVISACGNLE--LAFEGKSLHGLALKSLMGLDT--RVQNALITMYGRCRDIKSASTVFES 531
+V++A E +G+ H LK +GL++ V +AL+ MY + +I + VF
Sbjct: 477 SVLNAIAFAEDISVKQGQRCHAHLLK--LGLNSCPVVSSALLDMYAKRGNIDESEKVFNE 534
Query: 532 CYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHG 588
N W +ISA+S + + LF + E P+ ++ +S+L+AC + G++ G
Sbjct: 535 MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Query: 589 KQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCN 648
+I F++ ++++Y+ S+ +S M+ G G+ EA EL E+
Sbjct: 595 YEI----FNM-----------MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPG 639
Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
P +S + S+L +C G V G + +E ++PE
Sbjct: 640 G---PGESMLQSMLGSCRLHGNVKMGAKVAELAME---MKPE 675
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/637 (24%), Positives = 288/637 (45%), Gaps = 64/637 (10%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + + S +++ Y F+++L +F + DVV+WN +++ +N+ + L+F
Sbjct: 106 GFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ---IALNFV 162
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M G+ FD+ T +S G + +K G+ +D + N F+ MY++
Sbjct: 163 VRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRS 222
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSG-CLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
G + F M D +SWN+++SG + + ++ FR+M G + D+VS +S
Sbjct: 223 GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSV 282
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
+ +L + IH L IK GYE + V N L+S YS+CG +EA + F M+ +
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKRGYE--SLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
+VVSW +I + ++A + M+ V P+ T V LI+ + ++EG +
Sbjct: 341 NVVSWTTMI-----SSNKDDAVSIFLNMRF-DGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKE-- 358
HG I+ + + NS + Y+K +L A+ F I +++SWN+MISG +
Sbjct: 395 HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT-FREIISWNAMISGFAQNGF 453
Query: 359 -----MLYLCS-------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
++L + +++F ++L + S++ G+ H LKLG ++ +
Sbjct: 454 SHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
+AL+ MY G++ + + +S + W +I A + +G F+ + F M ++N
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMSQK-NQFVWTSIISAYSSHGDFETVMNLFHKMI-KEN 570
Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
+PD VT ++V++AC K ++ + N +I +Y
Sbjct: 571 VAPDLVTFLSVLTACNR---------------KGMVDKGYEIFNMMIEVYN--------- 606
Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLR 586
E + ++CM+ + A EL + P E + S+L +C G ++
Sbjct: 607 --LEPSHE----HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660
Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAW 623
G + V L + +S + + MY+ W
Sbjct: 661 MGAK----VAELAMEMKPELSGSYVQMYNIYAEKEEW 693
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 24/348 (6%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RG+ + L L++ YS E+ ++F++ ++VV+W MI++ ++ +
Sbjct: 305 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSI 359
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F M +G+ + T + +++A+ +K+G +H L IK G +++ S+ N F+ +YAK
Sbjct: 360 FLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
L ++ F + + +SWN ++SG N + + L F + + E N +
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGS 477
Query: 181 VAASACLGE---LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
V + E + G+ HA +KLG P VS ++L+ MY++ G+I+ +E+ F M
Sbjct: 478 VLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEM 535
Query: 238 TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
+ K+ W +II ++ +G FE +L H+M + +V PD+ T +++++ C R+G
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKM-IKENVAPDLVTFLSVLTACN-----RKG 589
Query: 298 RSVHGYAIRRLL--GYDLLMMNS----LMDFYSKSNSLSKAELLFNAI 339
GY I ++ Y+L + ++D ++ L +AE L + +
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 209/668 (31%), Positives = 342/668 (51%), Gaps = 54/668 (8%)
Query: 154 YPEKCLLY--FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHAL----GIKLGYED 207
+P +C+ + +E+ + E+ D SL A A+S C LS I +L G+ G
Sbjct: 15 FPPRCVSFTTIKELILT-EENDGSSLHYA-ASSPCFLLLSKCTNIDSLRQSHGVLTGNGL 72
Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
+S+ L+S+Y G + A F + D W ++ + LN + E L ++
Sbjct: 73 MGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKL-YD 131
Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
+ + D + C + L G+ +H ++ + +D +++ L+D Y+K
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-VPSFDNVVLTGLLDMYAKCG 190
Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGLFKEML---------------YLCSQFSFSTLL 372
+ A +FN I + ++V W SMI+G K L L +++++ TL+
Sbjct: 191 EIKSAHKVFNDIT-LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
+C +L GK H +K G ++ V +L+ MY+ CGD+ A + SH
Sbjct: 250 M---ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH- 305
Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
D W +IV T NG EA+ F+ M + P+ VT+ +V+S CG +E G+S
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRS 364
Query: 493 LHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNK 551
+HGL++K +G+ DT V NAL+ MY +C + A VFE ++ WN +IS FSQN
Sbjct: 365 VHGLSIK--VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 552 AEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS--FI 606
+ AL LF + E PN +++ S+ SAC LG L G +H + LGF +S +
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 607 SSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGI 651
+ALLD Y+ C K+ WS+MI YG G ++ELF EM
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 652 RPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAY 711
+P +S+ S+LSAC H+G+V+EG +Y+++M ++Y+ P T+H+ C+VDML R+G+L++A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 712 EFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALG 771
+ I+ +PIQP +GA L C H +G+ V + + L P++ YY+ +SN+Y + G
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662
Query: 772 RWKDAVEI 779
RW A E+
Sbjct: 663 RWNQAKEV 670
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 263/544 (48%), Gaps = 23/544 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G + + +T L++ Y Y + + +F + D W M+ N+ V + +
Sbjct: 71 GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+++ G R+D + A T++ L G+ +HC +K D+ + ++MYAKC
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKC 189
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G++ S+ F+ + + V W ++++G + N+ E+ L+ F M + + + + +
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A L L GK H +K G E S + SL+ MY +CGDI A R F + D
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSS--CLVTSLLDMYVKCGDISNARRVFNEHSHVD 307
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
+V W A+I G+ NG EA L +M+ + ++P+ T+ +++S C L GRSVH
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIENLELGRSVH 366
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----F 356
G +I+ + +D + N+L+ Y+K A+ +F + D+V+WNS+ISG
Sbjct: 367 GLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSI 424
Query: 357 KEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGF-SNNTIGV-N 407
E L+L + + T+ ++ +C S SL G S+H + +KLGF +++++ V
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
AL+ Y CGD +A + I +T W+ +I + G +++ F+ M ++Q
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEK-NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ- 542
Query: 468 SPDSVTLVNVISACGNLELAFEGKSLHGLALKSL-MGLDTRVQNALITMYGRCRDIKSAS 526
P+ T +++SACG+ + EGK K T+ ++ M R +++ A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 527 TVFE 530
+ E
Sbjct: 603 DIIE 606
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 233/486 (47%), Gaps = 27/486 (5%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
T LL Y+ +S+ +F + ++VV W +MI V+N GL F M E +
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
+ T ++ A T+++ L QG+ H +K+G+ S L ++MY KCGD++++
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
F+ D V W ++ G HN + L F++M + + V+++S ++ + L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
G+ +H L IK+G D+ +V N+L+ MY++C A+ F + KD+V+WN+II
Sbjct: 360 ELGRSVHGLSIKVGIWDT---NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIIS 416
Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
GF+ NG EA L H M SV P+ TV +L S CA L G S+H Y+++ LG
Sbjct: 417 GFSQNGSIHEALFLFHRMN-SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK--LG 473
Query: 311 Y----DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
+ + + +L+DFY+K A L+F+ I N ++W++MI G
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT-ITWSAMIGGYGKQGDTIGSLE 532
Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLK-LGFSNNTIGVNALMHMY 413
LF+EML + + ST +IL +C + GK K F+ +T ++ M
Sbjct: 533 LFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
G+L A +++++ D C+ + C + F K M + PD +
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML---DLHPDDAS 649
Query: 474 LVNVIS 479
++S
Sbjct: 650 YYVLVS 655
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/603 (31%), Positives = 311/603 (51%), Gaps = 40/603 (6%)
Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
+ ++L Y+ CG I A + F M ++S+N +I + G + +A + M +
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRM-VSE 109
Query: 273 SVE--PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLS 330
V+ PD T + + ++ G VHG +R G D + N+L+ Y +
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
A +F+ + D++SWN+MISG +F M+ +T++++LP C
Sbjct: 170 MARDVFDVMKN-RDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 379 NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCW 438
+ LE G+++H + + NAL++MY+ CG + A + R+ D W
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR-DVITW 287
Query: 439 NIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLAL 498
+I T++G + A++ + M Q + P++VT+ +++S CG+ +GK LHG A+
Sbjct: 288 TCMINGYTEDGDVENALELCRLM-QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 499 KSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALE 558
+ + D ++ +LI+MY +C+ + VF + W+ +I+ QN+ AL
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406
Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
LF+ + + EPN ++ S+L A L LR IH ++ GF + ++ L+ +YS
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 616 NC-------------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS 656
C K W ++IS YG HG G A+++F EM SG+ P +
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526
Query: 657 SVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKN 716
+ S L+ACSHSGLV+EGL + MLE Y + H+ CIVD+LGR+G+L EAY I
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586
Query: 717 LPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
+P +P VWGA+L+AC H + ++G+ A LF+LEPEN G Y+ L+N+Y ALGRWKD
Sbjct: 587 IPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDM 646
Query: 777 VEI 779
++
Sbjct: 647 EKV 649
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/576 (24%), Positives = 267/576 (46%), Gaps = 23/576 (3%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
++L Y+ + + LF E ++++N +I V + F MV EG++
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 71 --FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
D T + A ++ +K G VVH +++ D + N + MY G + +
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F M D +SWNT++SG N Y L+ F M D+ ++ S + L
Sbjct: 173 DVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLK 232
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
+L G+ +H L + D + V N+L++MY +CG ++ A F M +DV++W +
Sbjct: 233 DLEMGRNVHKLVEEKRLGDK--IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I+G+ +G E A +L MQ V P+ T+ +L+S+C D+L + +G+ +HG+A+R+
Sbjct: 291 INGYTEDGDVENALELCRLMQF-EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNA-----IAPMNDLVS---WNSMIS---GLFK 357
+ D+++ SL+ Y+K + +F+ P + +++ N ++S GLFK
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 358 EMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
M + + +TL ++LP+ + L +IHC+ K GF ++ L+H+Y CG
Sbjct: 410 RMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCG 469
Query: 418 DLVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
L +A F+ +Q + D W +I +G A++ F M + +P+ +T
Sbjct: 470 TLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV-RSGVTPNEITF 528
Query: 475 VNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALITMYGRCRDIKSASTVFESC- 532
+ ++AC + L EG +L L+ L + ++ + GR + A + +
Sbjct: 529 TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588
Query: 533 YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEP 567
+ W +++A + ++ + + E EP
Sbjct: 589 FEPTSTVWGALLAACVTHENVQLGEMAANKLFELEP 624
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 164/357 (45%), Gaps = 16/357 (4%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
+ +L+ Y + + +F +DV+TW MI E+ V L M
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 67 EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
EG+R ++ T+ +VS + G+ +H +++ + +D + ++MYAKC ++
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
FSG T W+ I++GC+ N L F+ M + + +L+S + A A
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM----TCKDV 242
L +L IH K G+ S + L+ +YS+CG +E+A + F G+ KDV
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSS--LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVH 301
V W A+I G+ ++G A + M+++RS V P+ T + ++ C+ S L+ EG ++
Sbjct: 491 VLWGALISGYGMHGDGHNALQVF--MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLF 548
Query: 302 GYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG 354
+ + Y L ++ ++D ++ L +A L I W ++++
Sbjct: 549 RFMLEH---YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALF----YETCNKDVVTWNAMITACVENRCVVMG 57
GF++ L +T L+ YS ES+ +F + +KDVV W A+I+ +
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 58 LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKA-GMIADSSLCNVFVN 116
L F EMV G+ + T ++A + +++G + ++ +A S+ V+
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569
Query: 117 MYAKCGDLNSSECTFSGMHCADTVS-WNTIMSGCL-HNN 153
+ + G L+ + + + T + W +++ C+ H N
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHEN 608
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 299/584 (51%), Gaps = 38/584 (6%)
Query: 227 IEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS 286
+E A + F M D WN +I GF G + EA M + V+ D T +I
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKADTFTYPFVIK 138
Query: 287 LCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLV 346
A L EG+ +H I+ D+ + NSL+ Y K AE +F + P D+V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM-PERDIV 197
Query: 347 SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
SWNSMISG LFKEML + + ++ L +C+ S + GK IHC
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 395 LKLGFSNNTIGV-NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQE 453
++ + V +++ MY G++ A + + + WN++I +NG +
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMIGCYARNGRVTD 316
Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALI 513
A F+ M++Q PD +T +N++ A LE G+++HG A++ ++ ALI
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALI 372
Query: 514 TMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEI 570
MYG C +KSA +F+ N+ +WN +I+A+ QN ALELF+ L P+
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDST 432
Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
+I SIL A + L G++IH ++ + N+ I ++L+ MY+ C
Sbjct: 433 TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI 492
Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
K +W+S+I AY HG G ++ LF EM S + P KS+ SLL+ACS SG+VDEG
Sbjct: 493 LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGW 552
Query: 676 QYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
+Y+ +M EY + P EH+ C++D++GR+G A F++ +P P +WG++L+A +
Sbjct: 553 EYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRN 612
Query: 736 HGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
H D + + AE +FK+E +N G Y+ L NMY GRW+D I
Sbjct: 613 HKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 163/573 (28%), Positives = 287/573 (50%), Gaps = 28/573 (4%)
Query: 8 PTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEE 67
P T L +++ E +L LF E D WN MI + + F+ MV
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
G++ D+ T ++ ++ ++ L++G+ +H + IK G ++D +CN +++Y K G +
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
E F M D VSWN+++SG L L+ F+EM G + D S SA+ A + +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
GK IH ++ E V V S++ MYS+ G++ AER F GM +++V+WN
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGD-VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
+I +A NG+ +AF +M ++PD+ T + L+ A + EGR++HGYA+RR
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR 359
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
+++ +L+D Y + L AE++F+ +A N ++SWNS+I+ L
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN-VISWNSIIAAYVQNGKNYSALEL 418
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F+E+ +T+ +ILP+ SL G+ IH + +K + +NTI +N+L+HMY
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
CGDL A I D WN +I+A +G + ++ F M + +P+ T
Sbjct: 479 CGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASR-VNPNKSTFA 536
Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC- 532
++++AC + EG + ++K G+D +++ ++ + GR + +A E
Sbjct: 537 SLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 533 YNCNLCTWNCMISAFSQNK----AEVRALELFR 561
+ W +++A +K AE A ++F+
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 205/393 (52%), Gaps = 24/393 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF++ + SL++ Y + + +F E +D+V+WN+MI+ + L F
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF 219
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYAK 120
EM++ G + D + + + A + + K G+ +HC ++++ + D + ++MY+K
Sbjct: 220 KEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK 279
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMG-WSGEQADNVSLS 178
G+++ +E F+GM + V+WN +M GC N L F++M +G Q D ++
Sbjct: 280 YGEVSYAERIFNGMIQRNIVAWN-VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSI 338
Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
+ + ASA L G+ IH ++ G+ P++ + +LI MY +CG +++AE F M
Sbjct: 339 NLLPASAILE----GRTIHGYAMRRGF--LPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
K+V+SWN+II + NGK A +L E+ S+ PD T+ +++ A+SL L EGR
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
+H Y ++ + +++NSL+ Y+ L A FN I + D+VSWNS+I
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL-LKDVVSWNSIIMAYAVH 510
Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCN 379
LF EM+ + ST ++L +C+
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RGFL H+ T+L+ Y +S+ +F K+V++WN++I A V+N L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F E+ + + DSTT+ I+ A + L +GR +H +K+ +++ + N V+MYA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CGDL + F+ + D VSWN+I+ + + + F EM S + + +S
Sbjct: 479 CGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
+AA + G + G + +K Y P + ++ + + G+ AA+R
Sbjct: 539 LAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKR 589
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 231/751 (30%), Positives = 362/751 (48%), Gaps = 51/751 (6%)
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
F +LL SALT L G+ +H + G D + VNMY KCG L+ +
Sbjct: 61 FTFPSLLKACSALTN---LSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 131 F-------SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
F SG+ D WN+++ G ++ + FR M G + D SLS V+
Sbjct: 118 FDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 184 SACLGELSY--GKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK- 240
G GK IH ++ + ++ +LI MY + G A R F + K
Sbjct: 178 MCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT--ALIDMYFKFGLSIDAWRVFVEIEDKS 235
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
+VV WN +I GF +G E + DL + + SV+ + + C+ S GR +
Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDL-YMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEML 360
H ++ L D + SL+ YSK + +AE +F+ + L WN+M++ + E
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVD-KRLEIWNAMVAA-YAEND 352
Query: 361 YLCSQ---FSFSTLLAILP---------SCNSPESL-EFGKSIHCWQLKLGFSNNTIGVN 407
Y S F F ++LP SC S L +GKS+H K + + +
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNA 467
AL+ +Y CG A+ + + + D W +I +NG F+EA+K F M ++
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 468 -SPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
PDS + +V +AC LE G +HG +K+ + L+ V ++LI +Y +C + A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLG 583
VF S N+ WN MIS +S+N +++LF + + P+ +SI S+L A +
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMIS 628
L GK +HG+ LG ++ + +AL+DMY C KS W+ MI
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 629 AYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVR 688
YG HG A+ LF EM +G P + +SL+SAC+HSG V+EG + M ++Y +
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 689 PETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAEL 748
P EH+ +VD+LGR+G L+EAY FIK +PI+ +W +LSA H + ++G AE
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 749 LFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
L ++EPE Y+ L N+Y+ G +A ++
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKL 802
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 194/697 (27%), Positives = 326/697 (46%), Gaps = 88/697 (12%)
Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
Y + LY + G S + S + A + L LSYGK IH + LG+ P+++
Sbjct: 40 YLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT 99
Query: 214 TNSLISMYSQCGDIEAAERAF--W-----GMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
SL++MY +CG ++ A + F W G++ +DV WN++IDG+ +F+E
Sbjct: 100 --SLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 267 EMQLMRSVEPDIATVVTLIS-LCADSLLLR-EGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
M L+ V PD ++ ++S +C + R EG+ +HG+ +R L D + +L+D Y
Sbjct: 158 RM-LVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYF 216
Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM-------LYLCSQFSFSTLLAI--- 374
K A +F I +++V WN MI G LY+ ++ + L++
Sbjct: 217 KFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFT 276
Query: 375 --LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
L +C+ E+ FG+ IHC +K+G N+ +L+ MY CG + A ++ + +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV-D 335
Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
WN ++ A +N + A+ F M +Q++ PDS TL NVIS C L L GKS
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFM-RQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 493 LHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKA 552
+H K + + +++AL+T+Y +C A VF+S ++ W +IS +N
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 553 EVRALELFRHLE-----FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
AL++F ++ +P+ + S+ +AC L LR G Q+HG + G N F+
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 608 SALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIR 652
S+L+D+YS C ++ AW+SMIS Y + +I+LF+ M + GI
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 653 PTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG------- 705
P S+ S+L A S + + +G + L + +T ++DM + G
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTL-RLGIPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 706 ---KLQEAYEFIKNLPI------------------------QPKPGVWGAMLSACSHHGD 738
K+Q NL I P + +++SAC+H G
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 739 TKMGKQVAELL---FKLEPENVGYYISLSNMYVALGR 772
+ GK + E + + +EP N+ +Y +NM LGR
Sbjct: 694 VEEGKNIFEFMKQDYGIEP-NMEHY---ANMVDLLGR 726
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 196/745 (26%), Positives = 337/745 (45%), Gaps = 56/745 (7%)
Query: 10 STSLLTAYSNVSYFESSLALF-------YETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
+TSL+ Y + + ++ +F +DV WN+MI + R G+ F
Sbjct: 98 ATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 63 EMVEEGIRFDSTTLLIIVSALTQMNCLK--QGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
M+ G+R D+ +L I+VS + + + +G+ +H ++ + DS L ++MY K
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217
Query: 121 CG-DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
G +++ ++ V WN ++ G + E L + + + + S +
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
A+ A + +G+ IH +K+G + PY V SL+SMYS+CG + AE F +
Sbjct: 278 ALGACSQSENSGFGRQIHCDVVKMGLHNDPY--VCTSLLSMYSKCGMVGEAETVFSCVVD 335
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
K + WNA++ +A N A DL M+ +SV PD T+ +IS C+ L G+S
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
VH +R + + ++L+ YSK A L+F ++ D+V+W S+ISGL
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE-KDMVAWGSLISGLCKNG 453
Query: 356 -FKEMLYLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
FKE L + + ++ +C E+L FG +H +K G N
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
++L+ +Y CG A + +S + WN +I ++N + +I F M Q
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLML-SQ 571
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
PDSV++ +V+ A + +GKSLHG L+ + DT ++NALI MY +C K A
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEF---EPNEISIVSILSACTQL 582
+F+ + +L TWN MI + + + AL LF ++ P++++ +S++SAC
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIEL 642
G + GK I F + + ++ Y+N M+ G G EA
Sbjct: 692 GFVEEGKNI------FEFMKQDYGIEPNMEHYAN---------MVDLLGRAGLLEEAYSF 736
Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
M I S + LLSA V+ G+ +L R T +V ++++
Sbjct: 737 IKAM---PIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGST--YVQLINLYM 791
Query: 703 RSGKLQEAYEFI---KNLPIQPKPG 724
+G EA + + K + +PG
Sbjct: 792 EAGLKNEAAKLLGLMKEKGLHKQPG 816
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 175/631 (27%), Positives = 310/631 (49%), Gaps = 39/631 (6%)
Query: 2 GFLAH--LPTSTSLLTAYSNVSYFESSLAL-----FYETCNK-DVVTWNAMITACVENRC 53
GF+ L T + L TA ++ YF+ L++ F E +K +VV WN MI +
Sbjct: 194 GFMLRNSLDTDSFLKTALIDM-YFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGI 252
Query: 54 VVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
L + ++ ST+ + A +Q GR +HC +K G+ D +C
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTS 312
Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
++MY+KCG + +E FS + WN +++ N+Y L F M D
Sbjct: 313 LLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD 372
Query: 174 NVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERA 233
+ +LS+ ++ + LG +YGK +HA K + + ++ ++L+++YS+CG A
Sbjct: 373 SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS--TIESALLTLYSKCGCDPDAYLV 430
Query: 234 FWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQ-LMRSVEPDIATVVTLISLCADSL 292
F M KD+V+W ++I G NGKF+EA + +M+ S++PD + ++ + CA
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 293 LLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
LR G VHG I+ L ++ + +SL+D YSK A +F +++ N +V+WNSMI
Sbjct: 491 ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTEN-MVAWNSMI 549
Query: 353 S------------GLFKEMLYLCSQFSFS---TLLAILPSCNSPESLEFGKSIHCWQLKL 397
S LF ML SQ F ++ ++L + +S SL GKS+H + L+L
Sbjct: 550 SCYSRNNLPELSIDLFNLML---SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRL 606
Query: 398 GFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKT 457
G ++T NAL+ MY+ CG A ++ +++ H S + WN++I +G A+
Sbjct: 607 GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLIT-WNLMIYGYGSHGDCITALSL 665
Query: 458 FKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITM 515
F M ++ SPD VT +++ISAC + EGK++ +K G++ +++ ++ +
Sbjct: 666 FDEM-KKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF-MKQDYGIEPNMEHYANMVDL 723
Query: 516 YGRCRDIKSASTVFESC-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISI- 572
GR ++ A + ++ + W C++SA + + E+ L + L EP S
Sbjct: 724 LGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTY 783
Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
V +++ + G+ ++ G + G +
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ 814
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 217/482 (45%), Gaps = 45/482 (9%)
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
S N+ I G++ +A L + + T +L+ C+ L G+++HG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA------PMNDLVSWNSMISGLFK 357
+ YD + SL++ Y K L A +F+ + D+ WNSMI G FK
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 358 ------------EMLYLCSQ---FSFSTLLAILPSCNSPE-SLEFGKSIHCWQLKLGFSN 401
ML + FS S +++++ C E GK IH + L+
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM--CKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 402 NTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSM 461
++ AL+ MY G + A+ + I S+ WN++IV +G + ++ + +
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYM-L 262
Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRD 521
+ + S + + AC E + G+ +H +K + D V +L++MY +C
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 522 IKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF---RHLEFEPNEISIVSILSA 578
+ A TVF + L WN M++A+++N AL+LF R P+ ++ +++S
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
C+ LG+ +GK +H +F Q S I SALL +YS C K AW
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 624 SSMISAYGYHGKGWEAIELFHEMC--NSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNM 681
S+IS +GK EA+++F +M + ++P + S+ +AC+ + GLQ + +M
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 682 LE 683
++
Sbjct: 503 IK 504
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 313 bits (801), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 223/825 (27%), Positives = 376/825 (45%), Gaps = 78/825 (9%)
Query: 16 AYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTT 75
+Y V F + + ++ + C + + +G M+ G R TT
Sbjct: 26 SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFR--PTT 83
Query: 76 LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLC------NVFVNMYAKCGDLNSSEC 129
+ +NCL Q + A M+ D N +N Y+K D+ +
Sbjct: 84 FV--------LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANS 135
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
F+ M D VSWN+++SG L N K + F +MG G + D + + + + L +
Sbjct: 136 FFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLED 195
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
S G IH + +++G + V ++L+ MY++ + R F G+ K+ VSW+AII
Sbjct: 196 TSLGMQIHGIVVRVGCDTD--VVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAII 253
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVV--TLISLCADSLLLREGRSVHGYAIRR 307
G N A EMQ V ++ + +++ CA LR G +H +A++
Sbjct: 254 AGCVQNNLLSLALKFFKEMQ---KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
D ++ + +D Y+K +++ A++LF+ +N S+N+MI+G L
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ-SYNAMITGYSQEEHGFKALLL 369
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F ++ F +L + +C + L G I+ +K S + NA + MY
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
C L AF + + D WN +I A QNG E + F SM + + PD T
Sbjct: 430 CQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFG 487
Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV------- 528
+++ AC L + G +H +KS M ++ V +LI MY +C I+ A +
Sbjct: 488 SILKACTGGSLGY-GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 529 ---------FESCYNCNL----CTWNCMISAFSQNKAEVRALELF-RHLE--FEPNEISI 572
E +N L +WN +IS + + A LF R +E P++ +
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC--------------- 617
++L C L GKQIH V Q + +I S L+DMYS C
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLR 666
Query: 618 KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQY 677
+ W++MI Y +HGKG EAI+LF M I+P + IS+L AC+H GL+D+GL+Y
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726
Query: 678 YNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS-HH 736
+ M +Y + P+ H+ +VD+LG+SGK++ A E I+ +P + +W +L C+ H
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHR 786
Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
+ ++ ++ L +L+P++ Y LSN+Y G W+ ++ +
Sbjct: 787 NNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRR 831
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 178/674 (26%), Positives = 301/674 (44%), Gaps = 67/674 (9%)
Query: 13 LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
++ YS + + + F +DVV+WN+M++ ++N + + F +M EGI FD
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 73 STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
T II+ + + G +H + ++ G D + ++MYAK S F
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS-----ACL 187
G+ ++VSW+ I++GC+ NN L +F+EM Q N +S ++ AS A L
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-----QKVNAGVSQSIYASVLRSCAAL 294
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
EL G +HA +K + V + MY++C +++ A+ F + S+NA
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTAT--LDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRS-VEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
+I G++ +A L H +LM S + D ++ + CA L EG ++G AI+
Sbjct: 353 MITGYSQEEHGFKALLLFH--RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------ 354
L D+ + N+ +D Y K +L++A +F+ + D VSWN++I+
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLF 469
Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
LF ML + T +IL +C SL +G IH +K G ++N+ +L+ MY
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 415 NCGDLVAAFSLLQRISHNSDTS-------------------CWNIVIVACTQNGHFQEAI 455
CG + A + R ++ S WN +I ++A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITM 515
F M + +PD T V+ C NL A GK +H +K + D + + L+ M
Sbjct: 589 MLFTRMM-EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDM 647
Query: 516 YGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISI 572
Y +C D+ + +FE + TWN MI ++ + A++LF + E PN ++
Sbjct: 648 YSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTF 707
Query: 573 VSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGY 632
+SIL AC +G++ G + + + + L YSN M+ G
Sbjct: 708 ISILRACAHMGLIDKGLE------YFYMMKRDYGLDPQLPHYSN---------MVDILGK 752
Query: 633 HGKGWEAIELFHEM 646
GK A+EL EM
Sbjct: 753 SGKVKRALELIREM 766
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 163/606 (26%), Positives = 272/606 (44%), Gaps = 73/606 (12%)
Query: 9 TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
+++LL Y+ F SL +F K+ V+W+A+I CV+N + + L FF EM +
Sbjct: 217 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
+ ++ + ++ L+ G +H ++K+ AD + ++MYAKC ++ ++
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ 336
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F + S+N +++G + K LL F + SG D +SLS A A +
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
LS G I+ L IK S V V N+ I MY +C + A R F M +D VSWNAI
Sbjct: 397 GLSEGLQIYGLAIKSSL--SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I NGK E L M L +EPD T +++ C L G +H ++
Sbjct: 455 IAAHEQNGKGYETLFLFVSM-LRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSG 512
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLF-------NAIAPMNDL------------VSWN 349
+ + + SL+D YSK + +AE + N M +L VSWN
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 350 SMISG------------LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQ 394
S+ISG LF M+ + +F+++T +L +C + S GK IH
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT---VLDTCANLASAGLGKQIHAQV 629
Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
+K ++ + L+ MY CGDL + + ++ S D WN +I +G +EA
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
I+ F+ M +N P+ VT ++++ AC ++ L +G + +K GLD ++ +
Sbjct: 689 IQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEYFYM-MKRDYGLDPQLPH---- 742
Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVS 574
++ M+ ++ RALEL R + FE +++ +
Sbjct: 743 -------------------------YSNMVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Query: 575 ILSACT 580
+L CT
Sbjct: 778 LLGVCT 783
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 338/677 (49%), Gaps = 49/677 (7%)
Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS---SAVAASACLGELSYGK 194
D +++++ C+H + FR++ S ++ ++S A S +L +
Sbjct: 12 DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71
Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
V L K G + +V V SL+++Y + G + +A+ F M +D V WNA+I G++
Sbjct: 72 VQTHL-TKSGLDR--FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
NG +A+ L M L + P T+V L+ C + +GRSVHG A + L D
Sbjct: 129 NGYECDAWKLFIVM-LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI-----SGL-------FKEMLYL 362
+ N+L+ FYSK L AE+LF + VSWN+MI SGL FK M
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKD-KSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
+ S T++ +L + S E L HC +K G N+ V +L+ Y CG LV+A
Sbjct: 247 NVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 423 FSLLQRISHNSDTSCWNIVIVAC-TQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISAC 481
L S D+ IV+C + G A+ F S T+Q D+V LV ++ C
Sbjct: 301 ERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYF-SKTRQLCMKIDAVALVGILHGC 357
Query: 482 GNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWN 541
G SLHG A+KS + T V N LITMY + D+++ +FE L +WN
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417
Query: 542 CMISAFSQNKAEVRALELFRHLEFE----PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
+IS Q+ A E+F + P+ I+I S+L+ C+QL L GK++HG+
Sbjct: 418 SVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLR 477
Query: 598 LGFQENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIEL 642
F+ +F+ +AL+DMY+ C + A W+SMIS Y G A+
Sbjct: 478 NNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSC 537
Query: 643 FHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
+ EM G++P + + + +LSAC+H G VDEG + M++E+ + P +H+ +V +LG
Sbjct: 538 YLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLG 597
Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYIS 762
R+ EA I + I+P VWGA+LSAC H + ++G+ VA +F L+ +N G Y+
Sbjct: 598 RACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 657
Query: 763 LSNMYVALGRWKDAVEI 779
+SN+Y W D V +
Sbjct: 658 MSNLYATEAMWDDVVRV 674
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 234/494 (47%), Gaps = 25/494 (5%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
TSLL Y S+ LF E +D V WNA+I N F M+++G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
+TTL+ ++ Q + QGR VH ++ K+G+ DS + N ++ Y+KC +L S+E
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
F M TVSWNT++ + E+ + F+ M NV +S + +
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF-----EKNVEISPVTIINLLSAHV 263
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
S+ + +H L +K G + +SV SL+ YS+CG + +AER + +V +I+
Sbjct: 264 SH-EPLHCLVVKCGMVND--ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
+A G + A + + + ++ D +V ++ C S + G S+HGYAI+ L
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQL-CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
L++N L+ YSK + + LF + L+SWNS+ISG +F +
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQE-TPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 359 MLYLCSQFSFS-TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
M+ + T+ ++L C+ L GK +H + L+ F N AL+ MY CG
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCG 498
Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
+ V A S+ + I T+ WN +I + +G A+ + M +++ PD +T + V
Sbjct: 499 NEVQAESVFKSIKAPC-TATWNSMISGYSLSGLQHRALSCYLEM-REKGLKPDEITFLGV 556
Query: 478 ISACGNLELAFEGK 491
+SAC + EGK
Sbjct: 557 LSACNHGGFVDEGK 570
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 146/298 (48%), Gaps = 4/298 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G + + TSL+ AYS S+ L+ +V ++++ E + + + +F
Sbjct: 276 GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYF 335
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+ + ++ D+ L+ I+ + + + G +H +IK+G+ + + N + MY+K
Sbjct: 336 SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSA 180
D+ + F + +SWN+++SGC+ + F +M +G D ++++S
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
+A + L L+ GK +H ++ +E+ + V +LI MY++CG+ AE F +
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENF--VCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
+WN++I G++L+G A EM+ + ++PD T + ++S C + EG+
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEITFLGVLSACNHGGFVDEGK 570
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 185/596 (31%), Positives = 309/596 (51%), Gaps = 36/596 (6%)
Query: 213 VTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
+ N ++SMY +CG + A F M +++VS+ ++I G++ NG+ EA L +M L
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQE 162
Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA 332
+ PD ++I CA S + G+ +H I+ L+ N+L+ Y + N +S A
Sbjct: 163 DLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 333 ELLFNAIAPMNDLVSWNSMISGL------FKEMLYLCSQFSFSTLL-------AILPSCN 379
+F I PM DL+SW+S+I+G F+ + +L SF + L +C+
Sbjct: 223 SRVFYGI-PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
S ++G IH +K + N I +L MY CG L +A + +I DT+ WN
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI-ERPDTASWN 340
Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
++I NG+ EA+ F M + PD+++L +++ A +G +H +K
Sbjct: 341 VIIAGLANNGYADEAVSVFSQM-RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYN-CNLCTWNCMISAFSQNKAEVRALE 558
D V N+L+TMY C D+ +FE N + +WN +++A Q++ V L
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
LF+ + E EP+ I++ ++L C ++ L+ G Q+H + G FI + L+DMY+
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 616 NC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVIS 660
C + +WS++I Y G G EA+ LF EM ++GI P + +
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579
Query: 661 LLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQ 720
+L+ACSH GLV+EGL+ Y M E+ + P EH C+VD+L R+G+L EA FI + ++
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 721 PKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDA 776
P VW +LSAC G+ + ++ AE + K++P N ++ L +M+ + G W++A
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/669 (27%), Positives = 313/669 (46%), Gaps = 44/669 (6%)
Query: 75 TLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGM 134
T + ++ A + L QGR +H + + D+ L N ++MY KCG L + F M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 135 HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGK 194
+ VS+ ++++G N + + + +M D + S + A A ++ GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
+HA IKL E S ++ N+LI+MY + + A R F+G+ KD++SW++II GF+
Sbjct: 189 QLHAQVIKL--ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
G EA L EM P+ + + C+ L G +HG I+ L + +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS 369
SL D Y++ L+ A +F+ I D SWN +I+GL E + + SQ S
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQI-ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 370 -------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
+L ++L + P +L G IH + +K GF + N+L+ MY C DL
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
F+L + +N+D+ WN ++ AC Q+ E ++ FK M + PD +T+ N++ C
Sbjct: 426 FNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE-CEPDHITMGNLLRGCV 484
Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
+ G +H +LK+ + + ++N LI MY +C + A +F+S N ++ +W+
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
+I ++Q+ AL LF+ ++ EPN ++ V +L+AC+ +G++ G +++ +
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM---- 600
Query: 600 FQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVI 659
Q IS +C S ++ G+ EA EM + P
Sbjct: 601 -QTEHGISPT----KEHC------SCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWK 646
Query: 660 SLLSACSHSGLVDEGLQYYNNMLEEYDVRP-ETEHHVCIVDMLGRSGKLQEA---YEFIK 715
+LLSAC G V + N+L+ + P + HV + M SG + A +K
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILK---IDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703
Query: 716 NLPIQPKPG 724
++ PG
Sbjct: 704 KHDVKKIPG 712
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/584 (25%), Positives = 249/584 (42%), Gaps = 48/584 (8%)
Query: 13 LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFD 72
+L+ Y + +F +++V++ ++IT +N + + +M++E + D
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 73 STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
I+ A + + G+ +H IK + N + MY + ++ + F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 133 GMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELS 191
G+ D +SW++I++G + + L + +EM G + S++ A + L
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
YG IH L IK + SL MY++CG + +A R F + D SWN II G
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGC--SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG 345
Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY 311
A NG +EA + +M+ + PD ++ +L+ + L +G +H Y I+
Sbjct: 346 LANNGYADEAVSVFSQMRSSGFI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 312 DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM 359
DL + NSL+ Y+ + L LF D VSWN++++ LFK M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDL 419
L + T+ +L C SL+ G +HC+ LK G + N L+ MY CG L
Sbjct: 465 LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSL 524
Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
A + + N D W+ +IV Q+G +EA+ FK M + P+ VT V V++
Sbjct: 525 GQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALILFKEM-KSAGIEPNHVTFVGVLT 582
Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
AC ++ L EG + +Y + S E C C
Sbjct: 583 ACSHVGLVEEG----------------------LKLYATMQTEHGISPTKEHCS----CV 616
Query: 540 WNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLG 583
+ + A N+AE ++ EP+ + ++LSAC G
Sbjct: 617 VDLLARAGRLNEAE----RFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 244/542 (45%), Gaps = 51/542 (9%)
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
+ EA + Q S + + T ++LI C+ S L +GR +H + + YD ++ N
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEML---YL 362
++ Y K SL A +F+ P +LVS+ S+I+G L+ +ML +
Sbjct: 107 HILSMYGKCGSLRDAREVFD-FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV 165
Query: 363 CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAA 422
QF+F + I+ +C S + GK +H +KL S++ I NAL+ MY+ + A
Sbjct: 166 PDQFAFGS---IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDA 222
Query: 423 FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACG 482
+ I D W+ +I +Q G EA+ K M P+ + + AC
Sbjct: 223 SRVFYGIPMK-DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 483 NLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNC 542
+L G +HGL +KS + + +L MY RC + SA VF+ + +WN
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 543 MISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLG 599
+I+ + N A+ +F + F P+ IS+ S+L A T+ L G QIH ++ G
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 600 FQENSFISSALLDMYSNC-------------KSNA---AWSSMISAYGYHGKGWEAIELF 643
F + + ++LL MY+ C ++NA +W+++++A H + E + LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
M S P ++ +LL C + G Q + L+ + PE ++DM +
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAK 520
Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK------LEPENV 757
G L +A ++ + W ++ + G G++ A +LFK +EP +V
Sbjct: 521 CGSLGQARRIFDSMDNRDVVS-WSTLIVGYAQSG---FGEE-ALILFKEMKSAGIEPNHV 575
Query: 758 GY 759
+
Sbjct: 576 TF 577
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 234/505 (46%), Gaps = 32/505 (6%)
Query: 5 AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
+HL +L+ Y + + +FY KD+++W+++I + L EM
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 65 VEEGIRFDSTTLLIIVSALTQMNCLKQ---GRVVHCLSIKAGM----IADSSLCNVFVNM 117
+ G+ + I S+L + L + G +H L IK+ + IA SLC+ M
Sbjct: 261 LSFGVFHPNE--YIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD----M 314
Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
YA+CG LNS+ F + DT SWN I++G +N Y ++ + F +M SG D +SL
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGM 237
S + A LS G IH+ IK G+ ++V NSL++MY+ C D+ F
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLAD--LTVCNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 238 TCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
D VSWN I+ + + E L ++ L+ EPD T+ L+ C + L+
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHITMGNLLRGCVEISSLKL 491
Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-- 354
G VH Y+++ L + + N L+D Y+K SL +A +F+++ D+VSW+++I G
Sbjct: 492 GSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM-DNRDVVSWSTLIVGYA 550
Query: 355 ----------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHC-WQLKLGFSNNT 403
LFKEM + + T + +L +C+ +E G ++ Q + G S
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
+ ++ + G L A + + D W ++ AC G+ A K +++ +
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 464 -QQNASPDSVTLVNVISACGNLELA 487
S V L ++ ++ GN E A
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENA 695
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 3/257 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYE-TCNKDVVTWNAMITACVENRCVVMGLHF 60
GFLA L SLLT Y+ S LF + N D V+WN ++TAC+++ V L
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRL 460
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F M+ D T+ ++ +++ LK G VHC S+K G+ + + N ++MYAK
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CG L + F M D VSW+T++ G + + E+ L+ F+EM +G + ++V+
Sbjct: 521 CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGV 580
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
+ A + +G + G ++A ++ + SP + ++ + ++ G + AER M +
Sbjct: 581 LTACSHVGLVEEGLKLYAT-MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 241 -DVVSWNAIIDGFALNG 256
DVV W ++ G
Sbjct: 640 PDVVVWKTLLSACKTQG 656
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 226/808 (27%), Positives = 387/808 (47%), Gaps = 91/808 (11%)
Query: 12 SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVEN-RCVVMGLH---FFGEMVEE 67
+L++ YS + +F + ++D+V+WN+++ A ++ CVV + ++ +
Sbjct: 79 NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRV-----VHCLSIKAGMIADSSLCNVFVNMYAKCG 122
+ + S L S + ++ CL G V H + K G+ D + VN+Y K G
Sbjct: 139 DVVYTSRMTL---SPMLKL-CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
+ + F M D V WN ++ L EMG+ E D LSSA
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYL-------------EMGFKEEAID---LSSAFH 238
Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
+S L+ ++ L ++ +DS G +++ + ++
Sbjct: 239 SSG----LNPNEITLRLLARISGDDS--------------DAGQVKSFANGNDASSVSEI 280
Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA--DSLLLREGRSV 300
+ N + + +G++ +M + VE D T + +++ DSL L G+ V
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTFILMLATAVKVDSLAL--GQQV 337
Query: 301 HGYAIRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
H A++ LG DL++ NSL++ Y K A +F+ ++ DL+SWNS+I+G
Sbjct: 338 HCMALK--LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE-RDLISWNSVIAGIAQN 394
Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNS-PESLEFGKSIHCWQLKLGFSNNTIG 405
LF ++L + T+ ++L + +S PE L K +H +K+ +++
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
AL+ Y + A L +R HN D WN ++ TQ+ + +K F M +Q
Sbjct: 455 STALIDAYSRNRCMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
S D TL V CG L +GK +H A+KS LD V + ++ MY +C D+ +A
Sbjct: 513 ERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
F+S + W MIS +N E RA +F + P+E +I ++ A + L
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN---------------AAWSSMI 627
L G+QIH + L + F+ ++L+DMY+ C S AW++M+
Sbjct: 632 TALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 691
Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
HG+G E ++LF +M + GI+P K + I +LSACSHSGLV E ++ +M +Y +
Sbjct: 692 VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751
Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
+PE EH+ C+ D LGR+G +++A I+++ ++ ++ +L+AC GDT+ GK+VA
Sbjct: 752 KPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVAT 811
Query: 748 LLFKLEPENVGYYISLSNMYVALGRWKD 775
L +LEP + Y+ LSNMY A +W +
Sbjct: 812 KLLELEPLDSSAYVLLSNMYAAASKWDE 839
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 175/686 (25%), Positives = 303/686 (44%), Gaps = 65/686 (9%)
Query: 110 LCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIM------SGCLHNNYPEKCLLYFR 163
L N ++MY+KCG L + F M D VSWN+I+ S C+ N ++ L FR
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENI-QQAFLLFR 134
Query: 164 EMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQ 223
+ ++LS + G + + H K+G + +V+ +L+++Y +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA--GALVNIYLK 192
Query: 224 CGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT 283
G ++ + F M +DVV WN ++ + G EEA DL + P+ T+
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-SSGLNPNEITLRL 251
Query: 284 LISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN 343
L + D + +S F + +++ S +E++F
Sbjct: 252 LARISGDDSDAGQVKS----------------------FANGNDASSVSEIIFRNKGLSE 289
Query: 344 DLVSWN-SMISGLFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGF 399
L S S + F +M+ C Q +F +LA + +SL G+ +HC LKLG
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLA---TAVKVDSLALGQQVHCMALKLGL 346
Query: 400 SNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
N+L++MY A ++ +S D WN VI QNG EA+ F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 460 SMTQQQNASPDSVTLVNVISACGNLELAFE-GKSLHGLALKSLMGLDTRVQNALITMYGR 518
+ + PD T+ +V+ A +L K +H A+K D+ V ALI Y R
Sbjct: 406 QLL-RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 519 CRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR--HLEFE-PNEISIVSI 575
R +K A +FE +N +L WN M++ ++Q+ + L+LF H + E ++ ++ ++
Sbjct: 465 NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 576 LSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSN 620
C L + GKQ+H + G+ + ++SS +LDMY C +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 621 AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNN 680
AW++MIS +G+ A +F +M G+ P + ++ +L A S +++G Q + N
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 681 MLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTK 740
L + + + +VDM + G + +AY K + + W AML + HG+ K
Sbjct: 644 AL-KLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGK 701
Query: 741 MGKQVAELLFKL--EPENVGYYISLS 764
Q+ + + L +P+ V + LS
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLS 727
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/595 (26%), Positives = 272/595 (45%), Gaps = 61/595 (10%)
Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
L +A+ +S +L GK HA L +E++P + N+LISMYS+CG + A R F
Sbjct: 46 LRNAITSS----DLMLGKCTHAR--ILTFEENPERFLINNLISMYSKCGSLTYARRVFDK 99
Query: 237 MTCKDVVSWNAIIDGFALNGK-----FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADS 291
M +D+VSWN+I+ +A + + ++AF LL + V T+ ++ LC S
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAF-LLFRILRQDVVYTSRMTLSPMLKLCLHS 158
Query: 292 LLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM 351
+ S HGYA + L D + +L++ Y K + + ++LF + P D+V WN M
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM-PYRDVVLWNLM 217
Query: 352 ISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
+ YL F E+++ + H G + N I + L
Sbjct: 218 LKA------YLEMGF-------------KEEAIDLSSAFH----SSGLNPNEITLRLLAR 254
Query: 412 MYINCGDL--VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ + D V +F+ S S+ N + +G + +K F M + +
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVEC 313
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF 529
D VT + +++ ++ G+ +H +ALK + L V N+LI MY + R A TVF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV-L 585
++ +L +WN +I+ +QN EV A+ LF L +P++ ++ S+L A + L L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYS--NCKSNA------------AWSSMISAYG 631
KQ+H H + +SF+S+AL+D YS C A AW++M++ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYT 493
Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPE 690
G + ++LF M G R ++ ++ C +++G Q + ++ YD+
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQV 745
I+DM + G + A ++P+ P W M+S C +G+ + V
Sbjct: 554 VSSG--ILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHV 605
Score = 83.6 bits (205), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 1/237 (0%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G+ L S+ +L Y ++ F D V W MI+ C+EN H F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M G+ D T+ + A + + L+QGR +H ++K D + V+MYAKC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G ++ + C F + + +WN ++ G + ++ L F++M G + D V+ +
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
+A + G +S H + Y P + + L + G ++ AE M+
Sbjct: 727 SACSHSGLVSEA-YKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 304 bits (779), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 299/581 (51%), Gaps = 40/581 (6%)
Query: 230 AERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLC 288
A + F MT + + WN ++ + ++EE L H + R E PD T+ + C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV--LYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 289 ADSLLLREGRSVHGYAIRRL-LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
+ + G +HG+ + + LG DL + +SL+ Y K + +A +F+ + D+V+
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVT 129
Query: 348 WNSMISGL-----------FKEMLYLCSQFSFS--TLLAILPSCNSPESLEFGKSIHCWQ 394
W+SM+SG F + + S + TL+ ++ +C + G+ +H +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 395 LKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEA 454
++ GFSN+ VN+L++ Y A +L + I+ D W+ VI QNG EA
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-DVISWSTVIACYVQNGAAAEA 248
Query: 455 IKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALIT 514
+ F M P+ T++ V+ AC +G+ H LA++ + + +V AL+
Sbjct: 249 LLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE----PNEI 570
MY +C + A VF ++ +W +IS F+ N R++E F + E P+ I
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 571 SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------------- 617
+V +L +C++LG L K H +V GF N FI ++L+++YS C
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 618 --KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSGLVDEG 674
K W+S+I+ YG HGKG +A+E F+ M S ++P + + +S+LSACSH+GL+ EG
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 675 LQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACS 734
L+ + M+ +Y + P EH+ +VD+LGR G L A E K +P P P + G +L AC
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACR 547
Query: 735 HHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD 775
H + +M + VA+ LF+LE + GYY+ +SN+Y G W++
Sbjct: 548 IHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588
Score = 236 bits (601), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 264/551 (47%), Gaps = 37/551 (6%)
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
F M WNT++ E+ L +F M E+ DN +L A+ A L E+
Sbjct: 17 FGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREV 76
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIID 250
+YG++IH +K + V +SLI MY +CG + A R F + D+V+W++++
Sbjct: 77 NYGEMIHGF-VKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 251 GFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLG 310
GF NG +A + M + V PD T++TL+S C R GR VHG+ IRR
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
DL ++NSL++ Y+KS + +A LF IA D++SW+++I+ +F +
Sbjct: 196 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
M+ ++ + +T+L +L +C + LE G+ H ++ G AL+ MY+ C
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
A+++ RI D W +I T NG +I+ F M + N PD++ +V V+
Sbjct: 315 PEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 373
Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
+C L + K H +K + + +L+ +Y RC + +AS VF +
Sbjct: 374 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 433
Query: 539 TWNCMISAFSQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGH 594
W +I+ + + +ALE F H+ E +PNE++ +SILSAC+ G++ G +I
Sbjct: 434 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI--- 490
Query: 595 VFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPT 654
F L +++ Y + ++ ++ G G AIE+ M S PT
Sbjct: 491 -FKL-----------MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFS---PT 535
Query: 655 KSSVISLLSAC 665
+ +LL AC
Sbjct: 536 PQILGTLLGAC 546
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 215/472 (45%), Gaps = 28/472 (5%)
Query: 5 AHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
+ L +SL+ Y +L +F E D+VTW++M++ +N + FF M
Sbjct: 94 SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Query: 65 V-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGD 123
V + D TL+ +VSA T+++ + GR VH I+ G D SL N +N YAK
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 124 LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAA 183
+ F + D +SW+T+++ + N + LL F +M G + + ++ + A
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
A +L G+ H L I+ G E V V+ +L+ MY +C E A F + KDVV
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETE--VKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV 331
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
SW A+I GF LNG + + M L + PD +V ++ C++ L + + H Y
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-------- 355
I+ + + SL++ YS+ SL A +FN IA + D V W S+I+G
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA-LKDTVVWTSLITGYGIHGKGTK 450
Query: 356 ----FKEMLYLCS-QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN--- 407
F M+ + + T L+IL +C+ + G I KL ++ + N
Sbjct: 451 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI----FKLMVNDYRLAPNLEH 506
Query: 408 --ALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACT--QNGHFQEAI 455
L+ + GDL A + +R+ + ++ AC QNG E +
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 3/298 (1%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RGF L SLL Y+ F+ ++ LF KDV++W+ +I V+N L
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F +M+++G + T+L ++ A + L+QGR H L+I+ G+ + + V+MY K
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGW-SGEQADNVSLSS 179
C + FS + D VSW ++SG N + + F M + + D + +
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+ + + LG L K H+ IK G++ +P++ SL+ +YS+CG + A + F G+
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGA--SLVELYSRCGSLGNASKVFNGIAL 429
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
KD V W ++I G+ ++GK +A + + M V+P+ T ++++S C+ + L+ EG
Sbjct: 430 KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 303 bits (775), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 214/702 (30%), Positives = 348/702 (49%), Gaps = 63/702 (8%)
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSSAVAASACLG 188
F + TV WNTI+ G + NN P + LL++ M + D + SS + A A
Sbjct: 62 FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETK 121
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMY------SQCGDIEAAERAFWGMTCKDV 242
L GK +H I+ ++S V V NSL++MY C + + + F M K+V
Sbjct: 122 NLKAGKAVHCHLIRC-LQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 243 VSWNAIIDGFALNGKFEEA---FDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
V+WN +I + G+ EA F ++ M+ V+P + V + + S +++
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRME----VKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 300 VHGYAIRRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK 357
+G ++ Y DL +++S + Y++ + + +F++ N V WN+MI G++
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV-WNTMI-GVYV 293
Query: 358 EMLYLCSQFSF--------------STLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNT 403
+ L T L + ++ + +E G+ H + K
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQ 463
+ VN+LM MY CG + +F + + D WN +I A QNG E + M Q
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLMLVYEM-Q 411
Query: 464 QQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIK 523
+Q D +T+ ++SA NL GK H ++ + + + + LI MY + I+
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIR 470
Query: 524 SASTVFE-SCY-NCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSA 578
+ +FE S Y + TWN MIS ++QN + +FR + PN +++ SIL A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 579 CTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAW 623
C+Q+G + GKQ+HG +N F++SAL+DMYS +++ +
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 624 SSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLE 683
++MI YG HG G AI LF M SGI+P + +++LSACS+SGL+DEGL+ + M E
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 684 EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-VWGAMLSACSHHGDTKMG 742
Y+++P +EH+ CI DMLGR G++ EAYEF+K L + +WG++L +C HG+ ++
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 743 KQVAELLFKLEPEN--VGYYISLSNMYVALGRWK--DAVEIG 780
+ V+E L K + GY + LSNMY +WK D V G
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 273/590 (46%), Gaps = 33/590 (5%)
Query: 29 LFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG--IRFDSTTLLIIVSALTQM 86
LF V WN +I + N L F+ M + D+ T + A +
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 87 NCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC--------TFSGMHCAD 138
LK G+ VHC I+ + + N +NMY C LN+ +C F M +
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSC--LNAPDCFEYDVVRKVFDNMRRKN 178
Query: 139 TVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHA 198
V+WNT++S + + F M + VS + A + + V +
Sbjct: 179 VVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYG 238
Query: 199 LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF 258
L +KLG E + V +S ISMY++ GDIE++ R F +++ WN +I + N
Sbjct: 239 LMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 298
Query: 259 EEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNS 318
E+ +L E + + D T + S + + GR HG+ + ++++NS
Sbjct: 299 VESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNS 358
Query: 319 LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQ-------F 366
LM YS+ S+ K+ +F ++ D+VSWN+MIS GL E L L +
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRE-RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 367 SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-LMHMYINCGDLVAAFSL 425
+ T+ A+L + ++ + E GK H + ++ G G+N+ L+ MY G + + L
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE--GMNSYLIDMYSKSGLIRISQKL 475
Query: 426 LQRISH-NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
+ + D + WN +I TQNGH ++ F+ M +QN P++VT+ +++ AC +
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQI 534
Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
GK LHG +++ + + V +AL+ MY + IK A +F N T+ MI
Sbjct: 535 GSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMI 594
Query: 545 SAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQI 591
+ Q+ RA+ LF ++ +P+ I+ V++LSAC+ G++ G +I
Sbjct: 595 LGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 168/663 (25%), Positives = 277/663 (41%), Gaps = 105/663 (15%)
Query: 208 SPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHE 267
+P S +S Q G+ + A + F + V WN II GF N +L HE
Sbjct: 36 TPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICN-------NLPHE 88
Query: 268 MQL----MRSVEP----DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSL 319
L M+ P D T + + CA++ L+ G++VH + IR L ++ NSL
Sbjct: 89 ALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSL 148
Query: 320 MDFY------SKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK--EMLYLCSQF----- 366
M+ Y +F+ + N +V+WN++IS K C QF
Sbjct: 149 MNMYVSCLNAPDCFEYDVVRKVFDNMRRKN-VVAWNTLISWYVKTGRNAEACRQFGIMMR 207
Query: 367 -----SFSTLLAILPSCNSPESLEFGKSIHCWQLKLG--FSNNTIGVNALMHMYINCGDL 419
S + + + P+ + S++ + LKLG + + V++ + MY GD+
Sbjct: 208 MEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI 267
Query: 420 VAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVIS 479
++ + + WN +I QN E+I+ F + D VT + S
Sbjct: 268 ESSRRVFDSCVER-NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAAS 326
Query: 480 ACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCT 539
A L+ G+ HG K+ L + N+L+ MY RC + + VF S ++ +
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386
Query: 540 WNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVF 596
WN MISAF QN + L L ++ F+ + I++ ++LSA + L GKQ H +
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 597 HLGFQENSFISSALLDMYSNC-----------------KSNAAWSSMISAYGYHGKGWEA 639
G Q ++S L+DMYS + A W+SMIS Y +G +
Sbjct: 447 RQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 640 IELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV---- 695
+F +M IRP +V S+L ACS G VD G Q L + +R + +V
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ-----LHGFSIRQYLDQNVFVAS 560
Query: 696 CIVDMLGRSGKLQEAYEFIKNLP----------------------------------IQP 721
+VDM ++G ++ A + I+P
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 722 KPGVWGAMLSACSHHGDTKMGKQVAELL---FKLEPENVGYYISLSNMYVALGRWKDAVE 778
+ A+LSACS+ G G ++ E + + ++P + +Y +++M +GR +A E
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSS-EHYCCITDMLGRVGRVNEAYE 679
Query: 779 IGK 781
K
Sbjct: 680 FVK 682
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 202/387 (52%), Gaps = 11/387 (2%)
Query: 3 FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
++ L +S ++ Y+ + ESS +F +++ WN MI V+N C+V + F
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 63 EMV-EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
E + + I D T L+ SA++ + ++ GR H K + N + MY++C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G ++ S F M D VSWNT++S + N ++ L+ EM G + D +++++ +
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTC 239
+A++ L GK HA I+ G + + + + LI MYS+ G I +++ F G
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
+D +WN++I G+ NG E+ F + +M L +++ P+ TV +++ C+ + G+
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIGSVDLGKQ 542
Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
+HG++IR+ L ++ + ++L+D YSK+ ++ AE +F+ N V++ +MI G +
Sbjct: 543 LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS-VTYTTMILGYGQHG 601
Query: 360 LYLCSQFSFSTLLAILPSCNSPESLEF 386
+ + + S L++ S P+++ F
Sbjct: 602 M---GERAISLFLSMQESGIKPDAITF 625
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 17/259 (6%)
Query: 13 LLTAYSNVSYFESSLALFYET--CNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
L+ YS S LF + +D TWN+MI+ +N F +M+E+ IR
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
++ T+ I+ A +Q+ + G+ +H SI+ + + + + V+MY+K G + +E
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 131 FSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGEL 190
FS ++V++ T++ G + E+ + F M SG + D ++ + + SAC
Sbjct: 579 FSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVL--SAC---- 632
Query: 191 SYGKVIHALGIKLGYEDSPYVSVTNS------LISMYSQCGDIEAAERAFWGMTCKDVVS 244
SY +I G+K+ E ++ S + M + G + A G+ + ++
Sbjct: 633 SYSGLIDE-GLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIA 691
Query: 245 --WNAIIDGFALNGKFEEA 261
W +++ L+G+ E A
Sbjct: 692 ELWGSLLGSCKLHGELELA 710
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGI 69
+++L+ YS + + +F +T ++ VT+ MI ++ + F M E GI
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Query: 70 RFDSTTLLIIVSALTQMNCLKQG 92
+ D+ T + ++SA + + +G
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEG 641
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 329/648 (50%), Gaps = 46/648 (7%)
Query: 173 DNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAER 232
D+V+ SS + + + GK++HA I+ E P + NSLIS+YS+ GD AE
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE--PDSVLYNSLISLYSKSGDSAKAED 118
Query: 233 AFWGMT---CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCA 289
F M +DVVSW+A++ + NG+ +A + E L + P+ +I C+
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACS 177
Query: 290 DSLLLREGRSVHGYAIRR-LLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVS 347
+S + GR G+ ++ D+ + SL+D + K NS A +F+ ++ +N +V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN-VVT 236
Query: 348 WNSMIS-----GLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQL 395
W MI+ G +E + S TL ++ +C E+L GK +H W +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 396 KLGFSNNTIGVNALMHMYINC---GDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF- 451
+ G ++ +L+ MY C G + + R+ +S S W +I +N +
Sbjct: 297 RSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS-WTALITGYMKNCNLA 353
Query: 452 QEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
EAI F M Q + P+ T + ACGNL GK + G A K + ++ V N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
+I+M+ + ++ A FES NL ++N + +N +A +L + E +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC----------- 617
+ S+LS +G +R G+QIH V LG N + +AL+ MYS C
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 618 ----KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDE 673
++ +W+SMI+ + HG +E F++M G++P + + +++LSACSH GLV E
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 674 GLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC 733
G +++N+M E++ ++P+ EH+ C+VD+L R+G L +A+EFI +P Q VW L AC
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Query: 734 SHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
H +T++GK A + +L+P YI LSN+Y G+W+++ E+ +
Sbjct: 654 RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 231/478 (48%), Gaps = 33/478 (6%)
Query: 35 NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
+DVV+W+AM+ N + + F E +E G+ + ++ A + + + GRV
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 95 VHCLSIKAGMIADSSLCN--VFVNMYAKCGD-LNSSECTFSGMHCADTVSWNTIMSGCLH 151
+K G +S +C ++M+ K + ++ F M + V+W +++ C+
Sbjct: 188 TLGFLMKTGHF-ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
+P + + +F +M SG ++D +LSS +A A L LS GK +H+ I+ G D
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD---- 302
Query: 212 SVTNSLISMYSQC---GDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKF-EEAFDLLHE 267
V SL+ MY++C G ++ + F M V+SW A+I G+ N EA +L E
Sbjct: 303 DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 268 MQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSN 327
M VEP+ T + C + R G+ V G A +R L + + NS++ + KS+
Sbjct: 363 MITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD 422
Query: 328 SLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQ----------FSFSTLL 372
+ A+ F +++ N LVS+N+ + G F++ L S+ F+F++LL
Sbjct: 423 RMEDAQRAFESLSEKN-LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
+ + + S+ G+ IH +KLG S N NAL+ MY CG + A S + N
Sbjct: 482 SGVANVG---SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA-SRVFNFMEN 537
Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEG 490
+ W +I ++G ++TF M ++ P+ VT V ++SAC ++ L EG
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMI-EEGVKPNEVTYVAILSACSHVGLVSEG 594
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 227/490 (46%), Gaps = 33/490 (6%)
Query: 23 FESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSA 82
FE++ +F + +VVTW MIT C++ + FF +MV G D TL + SA
Sbjct: 219 FENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSA 278
Query: 83 LTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC---GDLNSSECTFSGMHCADT 139
++ L G+ +H +I++G++ D C++ V+MYAKC G ++ F M
Sbjct: 279 CAELENLSLGKQLHSWAIRSGLVDDVE-CSL-VDMYAKCSADGSVDDCRKVFDRMEDHSV 336
Query: 140 VSWNTIMSGCLHN-NYPEKCLLYFREMGWSGE-QADNVSLSSAVAASACLGELSYGKVIH 197
+SW +++G + N N + + F EM G + ++ + SSA A L + GK +
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
K G + SV NS+ISM+ + +E A+RAF ++ K++VS+N +DG N
Sbjct: 397 GQAFKRGLASNS--SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
FE+AF LL E+ R + T +L+S A+ +R+G +H ++ L + + N
Sbjct: 455 FEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCSQ 365
+L+ YSK S+ A +FN + N ++SW SMI+G F +M+ +
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 366 FSFSTLLAILPSCN-----SPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLV 420
+ T +AIL +C+ S F ++K + V+ L G L
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL----CRAGLLT 628
Query: 421 AAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ-EAIKTFKSMTQQQNASPDSVTLVNVIS 479
AF + + +D W + AC + + + + K + N + L N+ +
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688
Query: 480 ACGNLELAFE 489
G E + E
Sbjct: 689 CAGKWEESTE 698
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 93/193 (48%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RG ++ + S+++ + E + F K++V++N + N
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
E+ E + + T ++S + + +++G +H +K G+ + +CN ++MY+K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CG ++++ F+ M + +SW ++++G + + + L F +M G + + V+ +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 181 VAASACLGELSYG 193
++A + +G +S G
Sbjct: 582 LSACSHVGLVSEG 594
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 300 bits (767), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 318/653 (48%), Gaps = 92/653 (14%)
Query: 211 VSVTNSLISMYSQCGDIEAAERAFWGMTCKD--VVSWNAIIDGFALNG---KFEEAFDLL 265
+++T+ LIS Y G + A D V WN++I + NG K F L+
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 266 HEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSK 325
H + S PD T + C + +R G S H ++ ++ + N+L+ YS+
Sbjct: 119 HSL----SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR 174
Query: 326 SNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCSQFSFS--------TLL 372
SLS A +F+ ++ + D+VSWNS+I G K L + S+ + TL+
Sbjct: 175 CRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
+LP C S + GK +HC+ + N N L+ MY CG + A ++ +S
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS-V 292
Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ--------------------------- 465
D WN ++ +Q G F++A++ F+ M +++
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 466 -------NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-------DTRVQNA 511
P+ VTL++V+S C ++ GK +H A+K + L + V N
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 512 LITMYGRCRDIKSASTVFESC--YNCNLCTWNCMISAFSQNKAEVRALELFRHL-----E 564
LI MY +C+ + +A +F+S ++ TW MI +SQ+ +ALEL + +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS---FISSALLDMYSNC---- 617
PN +I L AC L LR GKQIH + L Q+N+ F+S+ L+DMY+ C
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYA--LRNQQNAVPLFVSNCLIDMYAKCGSIS 530
Query: 618 -----------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACS 666
K+ W+S+++ YG HG G EA+ +F EM G + +++ +L ACS
Sbjct: 531 DARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Query: 667 HSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVW 726
HSG++D+G++Y+N M + V P EH+ C+VD+LGR+G+L A I+ +P++P P VW
Sbjct: 591 HSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 727 GAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
A LS C HG ++G+ AE + +L + G Y LSN+Y GRWKD I
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/588 (25%), Positives = 269/588 (45%), Gaps = 71/588 (12%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLHFFGEM 64
L ++ L++ Y +V +++L + + V WN++I + +N C L+ FG M
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 65 VEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDL 124
D+ T + A +++ ++ G H LS+ G I++ + N V MY++C L
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 125 NSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWS-GEQADNVSLSSAVAA 183
+ + F M D VSWN+I+ P+ L F M G + DN++L + +
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
A LG S GK +H + + +V N L+ MY++CG ++ A F M+ KDVV
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVG--NCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQ---------------------------------- 269
SWNA++ G++ G+FE+A L +MQ
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 270 LMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL-------GYDLLMMNSLMDF 322
L ++P+ T+++++S CA L G+ +H YAI+ + G + +++N L+D
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDM 416
Query: 323 YSKSNSLSKAELLFNAIAPM-NDLVSWNSMISG------------LFKEMLYLCSQFSFS 369
Y+K + A +F++++P D+V+W MI G L EM Q +
Sbjct: 417 YAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPN 476
Query: 370 --TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV---NALMHMYINCGDLVAAFS 424
T+ L +C S +L GK IH + L+ N + + N L+ MY CG + A
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
+ + ++ + W ++ +G+ +EA+ F M ++ D VTL+ V+ AC +
Sbjct: 535 VFDNMMAKNEVT-WTSLMTGYGMHGYGEEALGIFDEM-RRIGFKLDGVTLLVVLYACSHS 592
Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFE 530
+ +G +K++ G+ ++ L+ + GR + +A + E
Sbjct: 593 GMIDQGMEYFN-RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 263/598 (43%), Gaps = 81/598 (13%)
Query: 137 ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVI 196
A WN+++ N KCL F M DN + A + + G+
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 197 HALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNG 256
HAL + G+ + +V N+L++MYS+C + A + F M+ DVVSWN+II+ +A G
Sbjct: 150 HALSLVTGFISNVFVG--NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 257 KFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMM 316
K + A ++ M PD T+V ++ CA G+ +H +A+ + ++ +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEM----- 359
N L+D Y+K + +A +F+ ++ + D+VSWN+M++G LF++M
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMS-VKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 360 -----------------------LYLCSQFSFS-------TLLAILPSCNSPESLEFGKS 389
L +C Q S TL+++L C S +L GK
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 390 IHCWQLKL-------GFSNNTIGVNALMHMYINCGDLVAAFSLLQRIS-HNSDTSCWNIV 441
IHC+ +K G + + +N L+ MY C + A ++ +S D W ++
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 442 IVACTQNGHFQEAIKTFKSMTQQQ-NASPDSVTLVNVISACGNLELAFEGKSLHGLALKS 500
I +Q+G +A++ M ++ P++ T+ + AC +L GK +H AL++
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 501 LM-GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALEL 559
+ V N LI MY +C I A VF++ N TW +++ + + AL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 560 F---RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
F R + F+ + ++++ +L AC+ G++ G + + + F S + Y
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME------YFNRMKTVFGVSPGPEHY-- 618
Query: 617 CKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEG 674
+ ++ G G+ A+ L EM + P ++ LS C G V+ G
Sbjct: 619 -------ACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVELG 666
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 243/539 (45%), Gaps = 63/539 (11%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF++++ +L+ YS + +F E DVV+WN++I + + + L F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 62 GEMVEE-GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
M E G R D+ TL+ ++ + G+ +HC ++ + MI + + N V+MYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLH----------------------------- 151
CG ++ + FS M D VSWN +++G
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 152 -NNYPEKCLLY-----FREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKL-- 203
+ Y ++ L Y R+M SG + + V+L S ++ A +G L +GK IH IK
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 204 -----GYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK--DVVSWNAIIDGFALNG 256
G+ D V N LI MY++C ++ A F ++ K DVV+W +I G++ +G
Sbjct: 397 DLRKNGHGDENM--VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 257 KFEEAFDLLHEM-QLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR-RLLGYDLL 314
+A +LL EM + P+ T+ + CA LR G+ +H YA+R + L
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS------------GLFKEMLYL 362
+ N L+D Y+K S+S A L+F+ + N+ V+W S+++ G+F EM +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALGIFDEMRRI 573
Query: 363 CSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
+ TLL +L +C+ ++ G + + + G S L+ + G L A
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNA 633
Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
A L++ + W + C +G + + +T+ + S TL++ + A
Sbjct: 634 ALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 210/515 (40%), Gaps = 88/515 (17%)
Query: 306 RRLLGYDLLMMN---SLMDFYSKSNSLSKAELLFNAIAPMNDLV-SWNSMIS-------- 353
++LL + +L +N L+ Y LS A L P + V WNS+I
Sbjct: 49 QKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCA 108
Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
GL + + ++F + +C S+ G+S H L GF +N
Sbjct: 109 NKCLYLFGLMHSLSWTPDNYTFPF---VFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
NAL+ MY C L A + +S D WN +I + + G + A++ F MT +
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMS-VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
PD++TLVNV+ C +L GK LH A+ S M + V N L+ MY +C + A+
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE-------------------- 566
TVF + ++ +WN M++ +SQ A+ LF ++ E
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 567 ------------------PNEISIVSILSACTQLGVLRHGKQIHGHVFHL-------GFQ 601
PNE++++S+LS C +G L HGK+IH + G
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 602 ENSFISSALLDMYSNCKS-----------------NAAWSSMISAYGYHGKGWEAIELFH 644
+ + + + L+DMY+ CK W+ MI Y HG +A+EL
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 645 EMCNSG--IRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLG 702
EM RP ++ L AC+ + G Q + L C++DM
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 703 RSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
+ G + +A N+ + W ++++ HG
Sbjct: 525 KCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 296 bits (759), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 193/630 (30%), Positives = 312/630 (49%), Gaps = 47/630 (7%)
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
L G+ +H I+ G S + N L++ Y++CG + A F + CKDVVSWN++I
Sbjct: 30 LVAGRAVHGQIIRTG--ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVE--PDIATVVTLISLCADSLLLRE--GRSVHGYAI 305
G++ NG ++ ++ + MR+ + P+ T+ + A+S L GR H +
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK--AESSLQSSTVGRQAHALVV 145
Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-----FKEML 360
+ D+ + SL+ Y K+ + +F A P + +W++M+SG +E +
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVF-AYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 361 YLCSQF---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
+ + F S A+L S + + G+ IHC +K G NAL+
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
MY C L A + S + ++ W+ ++ +QNG EA+K F M P
Sbjct: 265 MYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA-GIKPSE 322
Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRV--QNALITMYGRCRDIKSASTVF 529
T+V V++AC ++ EGK LH LK +G + + AL+ MY + + A F
Sbjct: 323 YTIVGVLNACSDICYLEEGKQLHSFLLK--LGFERHLFATTALVDMYAKAGCLADARKGF 380
Query: 530 ESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLR 586
+ ++ W +IS + QN AL L+R ++ PN+ ++ S+L AC+ L L
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 587 HGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYG 631
GKQ+HGH GF I SAL MYS C K +W++MIS
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 500
Query: 632 YHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPET 691
++G+G EA+ELF EM G+ P + ++++SACSH G V+ G Y+N M ++ + P+
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 692 EHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK 751
+H+ C+VD+L R+G+L+EA EFI++ I +W +LSAC +HG ++G E L
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMA 620
Query: 752 LEPENVGYYISLSNMYVALGRWKDAVEIGK 781
L Y+ LS +Y ALGR +D + K
Sbjct: 621 LGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Score = 231 bits (590), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 265/539 (49%), Gaps = 32/539 (5%)
Query: 73 STTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFS 132
++TLL ++ +Q L GR VH I+ G NV VN YAKCG L + F+
Sbjct: 14 TSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFN 73
Query: 133 GMHCADTVSWNTIMSGCLHN---NYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
+ C D VSWN++++G N + + FREM + +L+ A + L
Sbjct: 74 AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 133
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
+ G+ HAL +K+ YV SL+ MY + G +E + F M ++ +W+ ++
Sbjct: 134 STVGRQAHALVVKMSSFGDIYVD--TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVT-LISLCADSLLLREGRSVHGYAIRR- 307
G+A G+ EEA + + + D V T ++S A ++ + GR +H I+
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
LLG+ + + N+L+ YSK SL++A +F++ N ++W++M++G L
Sbjct: 252 LLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNS-ITWSAMVTGYSQNGESLEAVKL 309
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN 415
F M + S T++ +L +C+ LE GK +H + LKLGF + AL+ MY
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 416 CG---DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV 472
G D F LQ D + W +I QN +EA+ ++ M + P+
Sbjct: 370 AGCLADARKGFDCLQE----RDVALWTSLISGYVQNSDNEEALILYRRM-KTAGIIPNDP 424
Query: 473 TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC 532
T+ +V+ AC +L GK +HG +K GL+ + +AL TMY +C ++ + VF
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 533 YNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHG 588
N ++ +WN MIS S N ALELF + EP++++ V+I+SAC+ G + G
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/609 (27%), Positives = 289/609 (47%), Gaps = 37/609 (6%)
Query: 13 LLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMG---LHFFGEMVEEGI 69
L+ Y+ + ++F KDVV+WN++IT +N + + F EM + I
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
++ TL I A + + GR H L +K D + V MY K G +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCL----LYFREMGWSGEQADNV--SLSSAVAA 183
F+ M +T +W+T++SG E+ + L+ RE G +D V ++ S++AA
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKE-EGSDSDYVFTAVLSSLAA 233
Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
+ +G G+ IH + IK G +V+++N+L++MYS+C + A + F ++ +
Sbjct: 234 TIYVG---LGRQIHCITIKNGL--LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
+W+A++ G++ NG+ EA L M ++P T+V +++ C+D L EG+ +H +
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF 347
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----E 358
++ L +L+D Y+K+ L+ A F+ + D+ W S+ISG + E
Sbjct: 348 LLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE-RDVALWTSLISGYVQNSDNEE 406
Query: 359 MLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
L L + + T+ ++L +C+S +LE GK +H +K GF +AL
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS 471
MY CG L +L+ R + N D WN +I + NG EA++ F+ M + PD
Sbjct: 467 MYSKCGSLEDG-NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML-AEGMEPDD 524
Query: 472 VTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVF 529
VT VN+ISAC + G + + +GLD +V + ++ + R +K A
Sbjct: 525 VTFVNIISACSHKGFVERGWFYFNM-MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI 583
Query: 530 ESC-YNCNLCTWNCMISA-FSQNKAEVRALELFRHLEFEPNEISIVSILSAC-TQLGVLR 586
ES + LC W ++SA + K E+ + + E S LS T LG +R
Sbjct: 584 ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Query: 587 HGKQIHGHV 595
+++ H+
Sbjct: 644 DVERVWKHM 652
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 253/535 (47%), Gaps = 48/535 (8%)
Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
+H + P +T++ ++ + L GR+VHG IR + N L++FY+
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISG---------------LFKEMLYLCSQFSFS 369
K L+KA +FNAI D+VSWNS+I+G LF+EM +
Sbjct: 61 KCGKLAKAHSIFNAII-CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 370 TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG---DLVAAFSLL 426
TL I + +S +S G+ H +K+ + +L+ MY G D + F+ +
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDS-VTLVNVISACGNLE 485
+T W+ ++ G +EAIK F +++ DS V+S+
Sbjct: 180 PE----RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 486 LAFEGKSLHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
G+ +H + +K+ L+G + NAL+TMY +C + A +F+S + N TW+ M+
Sbjct: 236 YVGLGRQIHCITIKNGLLGF-VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
+ +SQN + A++LF + +P+E +IV +L+AC+ + L GKQ+H + LGF+
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
+ F ++AL+DMY+ + A W+S+IS Y + EA+ L+ M
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
+GI P ++ S+L ACS ++ G Q + + + ++ E + M + G
Sbjct: 415 KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI-KHGFGLEVPIGSALSTMYSKCGS 473
Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFK--LEPENVGY 759
L++ + P + W AM+S SH+G ++ E + +EP++V +
Sbjct: 474 LEDGNLVFRRTPNKDVVS-WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 223/498 (44%), Gaps = 34/498 (6%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV---EE 67
TSL+ Y E L +F ++ TW+ M++ V + F + EE
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
G D ++S+L + GR +HC++IK G++ +L N V MY+KC LN +
Sbjct: 217 GSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEA 275
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
F ++++W+ +++G N + + F M +G + ++ + A + +
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
L GK +H+ +KLG+E ++ T +L+ MY++ G + A + F + +DV W +
Sbjct: 336 CYLEEGKQLHSFLLKLGFE--RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS 393
Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
+I G+ N EEA L M+ + P+ T+ +++ C+ L G+ VHG+ I+
Sbjct: 394 LISGYVQNSDNEEALILYRRMK-TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 308 LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------L 355
G ++ + ++L YSK SL L+F P D+VSWN+MISG L
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRR-TPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 356 FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI- 414
F+EML + T + I+ +C+ +E G W ++ IG++ + Y
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERG-----W-FYFNMMSDQIGLDPKVDHYAC 565
Query: 415 ------NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMTQQQNA 467
G L A ++ + + W I++ AC +G + + K M
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRE 625
Query: 468 SPDSVTLVNVISACGNLE 485
S V L + +A G +
Sbjct: 626 SSTYVQLSGIYTALGRMR 643
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 153/296 (51%), Gaps = 3/296 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G L + S +L+T YS + +F + +++ +TW+AM+T +N + + F
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M GI+ T++ +++A + + L++G+ +H +K G V+MYAK
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G L + F + D W +++SG + N+ E+ L+ +R M +G ++ +++S +
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A + L L GK +H IK G+ V + ++L +MYS+CG +E F KD
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
VVSWNA+I G + NG+ +EA +L EM L +EPD T V +IS C+ + G
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEM-LAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 61/374 (16%)
Query: 462 TQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ--NALITMYGRC 519
T Q +P + TL+ ++ G+++HG +++ G T +Q N L+ Y +C
Sbjct: 5 TFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRT--GASTCIQHANVLVNFYAKC 62
Query: 520 RDIKSASTVFESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFE---PNEISIV 573
+ A ++F + ++ +WN +I+ +SQN + ++LFR + + PN ++
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Query: 574 SILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------K 618
I A + L G+Q H V + + ++ ++L+ MY +
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 619 SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKS-----SVISLLSACSHSGLVDE 673
+ WS+M+S Y G+ EAI++F+ + S +V+S L+A + GL +
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 674 -----------GLQYYNNMLEEYDVRPETEHHVC----------------IVDMLGRSGK 706
G +N L + E+ + C +V ++G+
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 707 LQEAYEFIKNL---PIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE-NVGYYIS 762
EA + + I+P +L+ACS + GKQ+ L KL E ++ +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 763 LSNMYVALGRWKDA 776
L +MY G DA
Sbjct: 363 LVDMYAKAGCLADA 376
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 274/513 (53%), Gaps = 34/513 (6%)
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
+ +H + L + ++ L+ S ++ A +F+ + P + WN++I G
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL-PRPQIFPWNAIIRGYSR 96
Query: 356 ---FKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
F++ L + S + T +L +C+ L+ G+ +H +LGF +
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDT-SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
N L+ +Y C L +A ++ + + T W ++ A QNG EA++ F M ++
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-RK 215
Query: 465 QNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKS 524
+ PD V LV+V++A L+ +G+S+H +K + ++ + +L TMY +C + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 525 ASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQ 581
A +F+ + NL WN MIS +++N A+++F + + P+ ISI S +SAC Q
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 582 LGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSM 626
+G L + ++ +V ++++ FISSAL+DM++ C + WS+M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 627 ISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYD 686
I YG HG+ EAI L+ M G+ P + + LL AC+HSG+V EG ++N M ++
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHK 454
Query: 687 VRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVA 746
+ P+ +H+ C++D+LGR+G L +AYE IK +P+QP VWGA+LSAC H ++G+ A
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 747 ELLFKLEPENVGYYISLSNMYVALGRWKDAVEI 779
+ LF ++P N G+Y+ LSN+Y A W E+
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 214/461 (46%), Gaps = 28/461 (6%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIR 70
T L+ A S+ + +F + + WNA+I N L + M +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 71 FDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
DS T ++ A + ++ L+ GR VH + G AD + N + +YAKC L S+
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 131 FSGMHCADT--VSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F G+ + VSW I+S N P + L F +M + D V+L S + A CL
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
+L G+ IHA +K+G E P + + SL +MY++CG + A+ F M +++ WNA+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I G+A NG EA D+ HEM + + V PD ++ + IS CA L + RS++ Y R
Sbjct: 295 ISGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
D+ + ++L+D ++K S+ A L+F+ D+V W++MI G L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA-----LMH 411
+ M + T L +L +CN + G W +++ I ++
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREG-----WWFFNRMADHKINPQQQHYACVID 467
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQ 452
+ G L A+ +++ + + W ++ AC ++ H +
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 239/512 (46%), Gaps = 29/512 (5%)
Query: 68 GIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSS 127
GI DS +I SA T LKQ +H + G+ L ++ + GD+ +
Sbjct: 17 GIHSDSFYASLIDSA-THKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 128 ECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACL 187
F + WN I+ G NN+ + LL + M + D+ + + A + L
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC--KDVVSW 245
L G+ +HA +LG++ V V N LI++Y++C + +A F G+ + +VSW
Sbjct: 133 SHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 246 NAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
AI+ +A NG+ EA ++ +M+ M V+PD +V++++ L++GRS+H +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 306 RRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
+ L + ++ SL Y+K ++ A++LF+ + N L+ WN+MISG
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN-LILWNAMISGYAKNGYAREAI 308
Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
+F EM+ + ++ + + +C SLE +S++ + + + ++ +AL+ M+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
CG + A + R + + D W+ +IV +G +EAI +++M ++ P+ VT
Sbjct: 369 AKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVT 426
Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESC- 532
+ ++ AC + + EG + + +I + GR + A V +
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 533 YNCNLCTWNCMISAFSQNK----AEVRALELF 560
+ W ++SA +++ E A +LF
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLF 518
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 179/378 (47%), Gaps = 5/378 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALF--YETCNKDVVTWNAMITACVENRCVVMGLH 59
GF A + L+ Y+ S+ +F + +V+W A+++A +N + L
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 60 FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYA 119
F +M + ++ D L+ +++A T + LKQGR +H +K G+ + L MYA
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
KCG + +++ F M + + WN ++SG N Y + + F EM + D +S++S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
A++A A +G L + ++ + Y D ++S ++LI M+++CG +E A F
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGARLVFDRTLD 386
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
+DVV W+A+I G+ L+G+ EA L M+ V P+ T + L+ C S ++REG
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAME-RGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEM 359
+ ++D ++ L +A + + + W +++S K
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Query: 360 LYLCSQFSFSTLLAILPS 377
+++ L +I PS
Sbjct: 506 HVELGEYAAQQLFSIDPS 523
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/598 (29%), Positives = 302/598 (50%), Gaps = 34/598 (5%)
Query: 215 NSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM-RS 273
NS + G++ AA + F M D+VSW +II + +EA L M+++ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
V PD + + ++ C S + G S+H YA++ L + + +SL+D Y + + K+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 334 LLFNAIAPMNDLVSWNSMISGL-----FKEMLYLCSQFSFS-------TLLAILPSCNSP 381
+F+ + P + V+W ++I+GL +KE L S+ S S T L +C
Sbjct: 164 RVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIV 441
+++GK+IH + GF N+L MY CG++ L + +S D W +
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSL 281
Query: 442 IVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSL 501
IVA + G +A++TF M Q P+ T ++ SAC +L G+ LH L
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQ-VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 502 MGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF- 560
+ V N+++ MY C ++ SAS +F+ ++ +W+ +I + Q + F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 561 --RHLEFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCK 618
R +P + ++ S+LS + V+ G+Q+H G ++NS + S+L++MYS C
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 619 SN---------------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLS 663
S + ++MI+ Y HGK EAI+LF + G RP + IS+L+
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
Query: 664 ACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKP 723
AC+HSG +D G Y+N M E Y++RP EH+ C+VD+L R+G+L +A + I + +
Sbjct: 521 ACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDD 580
Query: 724 GVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
VW +L AC GD + G++ AE + +L+P ++L+N+Y + G ++A + K
Sbjct: 581 VVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638
Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 166/632 (26%), Positives = 289/632 (45%), Gaps = 55/632 (8%)
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE--QADNVSLSS 179
G+L ++ F M D VSW +I+ + N ++ L+ F M D LS
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+ A ++YG+ +HA +K S YV +SL+ MY + G I+ + R F M
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVG--SSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGR 298
++ V+W AII G G+++E EM RS E D T + CA ++ G+
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMS--RSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---- 354
++H + I R L + NSL Y++ + LF ++ D+VSW S+I
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVSWTSLIVAYKRI 288
Query: 355 --------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
F +M + T ++ +C S L +G+ +HC L LG +++
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVS 348
Query: 407 NALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQN 466
N++M MY CG+LV+A L Q + D W+ +I Q G +E K F M +Q
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWM-RQSG 406
Query: 467 ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSAS 526
P L +++S GN+ + G+ +H LAL + ++ V+++LI MY +C IK AS
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 527 TVFESCYNCNLCTWNCMISAFSQNKAEVRALELFR---HLEFEPNEISIVSILSACTQLG 583
+F ++ + MI+ ++++ A++LF + F P+ ++ +S+L+ACT G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 584 VLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELF 643
L G H F++ + + Y+ + + M+ G+ +A ++
Sbjct: 527 QLDLG----FHYFNM-----------MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571
Query: 644 HEMCNSGIRPTKSSVI--SLLSACSHSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDM 700
+EM K V+ +LL AC G ++ G + +LE + P V + ++
Sbjct: 572 NEMS-----WKKDDVVWTTLLIACKAKGDIERGRRAAERILE---LDPTCATALVTLANI 623
Query: 701 LGRSGKLQEAYEFIKNLPIQ---PKPGVWGAM 729
+G L+EA KN+ + +PG W ++
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPG-WSSI 654
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 229/499 (45%), Gaps = 18/499 (3%)
Query: 3 FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
L+ + +SLL Y V + S +F E ++ VTW A+IT V GL +F
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198
Query: 63 EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCG 122
EM D+ T I + A + +K G+ +H I G + + N MY +CG
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258
Query: 123 DLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVA 182
++ C F M D VSW +++ K + F +M S + + +S +
Sbjct: 259 EMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
A A L L +G+ +H + LG DS +SV+NS++ MYS CG++ +A F GM C+D+
Sbjct: 319 ACASLSRLVWGEQLHCNVLSLGLNDS--LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDI 376
Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
+SW+ II G+ G EE F M+ + D A + +L+S+ + ++ GR VH
Sbjct: 377 ISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA-LASLLSVSGNMAVIEGGRQVHA 435
Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
A+ L + + +SL++ YSK S+ +A ++F +D+VS +MI+G
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE-TDRDDIVSLTAMINGYAEHGKSK 494
Query: 355 ----LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNAL 409
LF++ L + + T +++L +C L+ G + Q +
Sbjct: 495 EAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCM 554
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ + G L A ++ +S D W +++AC G + + + + +
Sbjct: 555 VDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCA 614
Query: 470 DS-VTLVNVISACGNLELA 487
+ VTL N+ S+ GNLE A
Sbjct: 615 TALVTLANIYSSTGNLEEA 633
Score = 173 bits (439), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 244/497 (49%), Gaps = 29/497 (5%)
Query: 12 SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEM--VEEGI 69
S L + N ++ +F + + D+V+W ++I V L F M V+ +
Sbjct: 45 SHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
D++ L +++ A Q + + G +H ++K +++ + + ++MY + G ++ S
Sbjct: 105 SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR 164
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
FS M + V+W I++G +H ++ L YF EM S E +D + + A+ A A L +
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAII 249
+ YGK IH I G+ + + V NSL +MY++CG+++ F M+ +DVVSW ++I
Sbjct: 225 VKYGKAIHTHVIVRGFVTT--LCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
+ G+ +A + +M+ V P+ T ++ S CA L G +H + L
Sbjct: 283 VAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---------FKEML 360
L + NS+M YS +L A +LF + D++SW+++I G FK
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 361 YL------CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
++ + F+ ++LL++ + +E G+ +H L G N+ ++L++MY
Sbjct: 401 WMRQSGTKPTDFALASLLSV---SGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYS 457
Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
CG + A S++ + D +I ++G +EAI F+ + + PDSVT
Sbjct: 458 KCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK-SLKVGFRPDSVTF 515
Query: 475 VNVISAC---GNLELAF 488
++V++AC G L+L F
Sbjct: 516 ISVLTACTHSGQLDLGF 532
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 177/356 (49%), Gaps = 10/356 (2%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RGF+ L + SL T Y+ + L LF +DVV+W ++I A V +
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F +M + + T + SA ++ L G +HC + G+ S+ N + MY+
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYST 357
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CG+L S+ F GM C D +SW+TI+ G + E+ YF M SG + + +L+S
Sbjct: 358 CGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASL 417
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
++ S + + G+ +HAL + G E + +V +SLI+MYS+CG I+ A F
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNS--TVRSSLINMYSKCGSIKEASMIFGETDRD 475
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
D+VS A+I+G+A +GK +EA DL E L PD T +++++ C S L G
Sbjct: 476 DIVSLTAMINGYAEHGKSKEAIDLF-EKSLKVGFRPDSVTFISVLTACTHSGQLDLG--F 532
Query: 301 HGYAIRRLLGYDLLMMNS----LMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
H + + + Y++ ++D ++ LS AE + N ++ D V W +++
Sbjct: 533 HYFNMMQET-YNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 201/726 (27%), Positives = 345/726 (47%), Gaps = 38/726 (5%)
Query: 78 IIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCA 137
I + + + N + G +HC IK G++ + LCN +++Y K + ++ F M
Sbjct: 28 IRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR 87
Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
+W ++S + L F EM SG + + SS V + A L ++SYG +H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
IK G+E + V +SL +YS+CG + A F + D +SW +I K
Sbjct: 148 GSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMM 316
+ EA EM + V P+ T V L L A S L L G+++H I R + ++++
Sbjct: 206 WREALQFYSEM-VKAGVPPNEFTFVKL--LGASSFLGLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 317 NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKEMLYLCS 364
SL+DFYS+ + + A + N+ + D+ W S++SG F EM L
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
Q + T AIL C++ SL+FGK IH +K+GF ++T NAL+ MY+ C S
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS 381
Query: 425 LLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNL 484
+ + + W +I+ +G Q+ M +++ P+ VTL V+ AC L
Sbjct: 382 RVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-VEPNVVTLSGVLRACSKL 440
Query: 485 ELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMI 544
+H L+ + + V N+L+ Y R + A V S + T+ ++
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
Query: 545 SAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQ 601
+ F++ AL + ++ +++S+ +SA LG L GK +H + GF
Sbjct: 501 TRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS 560
Query: 602 ENSFISSALLDMYSNCKS---------------NAAWSSMISAYGYHGKGWEAIELFHEM 646
+ + ++L+DMYS C S +W+ ++S +G A+ F EM
Sbjct: 561 GAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEM 620
Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
P + + LLSACS+ L D GL+Y+ M + Y++ P+ EH+V +V +LGR+G+
Sbjct: 621 RMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGR 680
Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
L+EA ++ + ++P ++ +L AC + G+ +G+ +A L P + YI L+++
Sbjct: 681 LEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADL 740
Query: 767 YVALGR 772
Y G+
Sbjct: 741 YDESGK 746
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 180/737 (24%), Positives = 323/737 (43%), Gaps = 44/737 (5%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G L +L +LL+ Y ++ LF E ++ V W MI+A +++ L F
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLF 112
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
EM+ G + T +V + + + G VH IK G +S + + ++Y+KC
Sbjct: 113 EEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKC 172
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G + FS + ADT+SW ++S + + L ++ EM +G + + +
Sbjct: 173 GQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
AS+ LG L +GK IH+ I G + V + SL+ YSQ +E A R +D
Sbjct: 233 GASSFLG-LEFGKTIHSNIIVRGIPLN--VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQD 289
Query: 242 VVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVH 301
V W +++ GF N + +EA EM+ + ++P+ T ++SLC+ L G+ +H
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 302 GYAIRRLLGYDLLMMNSLMDFYSK-SNSLSKAELLFNAIAPMNDLVSWNSMI-------- 352
I+ + N+L+D Y K S S +A +F A+ N +VSW ++I
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPN-VVSWTTLILGLVDHGF 407
Query: 353 ----SGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
GL EM+ + + TL +L +C+ + IH + L+ + N+
Sbjct: 408 VQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNS 467
Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
L+ Y + + A+++++ + D + ++ + G + A+ M
Sbjct: 468 LVDAYASSRKVDYAWNVIRSMKRR-DNITYTSLVTRFNELGKHEMALSVINYM-YGDGIR 525
Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
D ++L ISA NL GK LH ++KS V N+L+ MY +C ++ A V
Sbjct: 526 MDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKV 585
Query: 529 FESCYNCNLCTWNCMISAFSQN---KAEVRALELFRHLEFEPNEISIVSILSACTQLGVL 585
FE ++ +WN ++S + N + + A E R E EP+ ++ + +LSAC+
Sbjct: 586 FEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS----- 640
Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
+G + LG + + +Y+ + ++ G G+ EA +
Sbjct: 641 ------NGRLTDLGLE----YFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVET 690
Query: 646 MCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG 705
M ++P +LL AC + G + G N L P ++ + D+ SG
Sbjct: 691 M---HLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPAL--YILLADLYDESG 745
Query: 706 KLQEAYEFIKNLPIQPK 722
K + A + +NL + +
Sbjct: 746 KPELAQK-TRNLMTEKR 761
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 213/468 (45%), Gaps = 24/468 (5%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RG ++ TSL+ YS S E ++ + + +DV W ++++ V N +
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F EM G++ ++ T I+S + + L G+ +H +IK G + + N V+MY K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 121 C--GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
C ++ +S F M + VSW T++ G + + + + C EM + + V+LS
Sbjct: 373 CSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLS 431
Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
+ A + L + IHA ++ + D V V NSL+ Y+ ++ A M
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRR-HVDGEMV-VGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
+D +++ +++ F GK E A +++ M + D ++ IS A+ L G+
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYM-YGDGIRMDQLSLPGFISASANLGALETGK 548
Query: 299 SVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL--- 355
+H Y+++ ++NSL+D YSK SL A+ +F IA D+VSWN ++SGL
Sbjct: 549 HLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIAT-PDVVSWNGLVSGLASN 607
Query: 356 ---------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
F+EM ++ T L +L +C++ + G + +Q+ N V
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG--LEYFQVMKKIYNIEPQV 665
Query: 407 NALMHMY---INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHF 451
+H+ G L A +++ + + + ++ AC G+
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNL 713
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 287 bits (734), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/675 (26%), Positives = 328/675 (48%), Gaps = 40/675 (5%)
Query: 138 DTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIH 197
D S+ +++ G + ++ F + G + D SS + SA L + +G+ +H
Sbjct: 57 DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLH 116
Query: 198 ALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGK 257
IK G+ D VSV SL+ Y + + + + F M ++VV+W +I G+A N
Sbjct: 117 CQCIKFGFLDD--VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 258 FEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMN 317
+E L MQ +P+ T + + A+ + G VH ++ L + + N
Sbjct: 175 NDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 318 SLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQ 365
SL++ Y K ++ KA +LF+ + +V+WNSMISG +F M +
Sbjct: 234 SLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 366 FSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSL 425
S S+ +++ C + + L F + +HC +K GF + ALM Y C ++ A L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 426 LQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLE 485
+ I + W +I QN +EA+ F M +++ P+ T +++A +
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTALPVIS 411
Query: 486 LAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMIS 545
+ +H +K+ + V AL+ Y + ++ A+ VF + ++ W+ M++
Sbjct: 412 PS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 546 AFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGV-LRHGKQIHGHVFHLGFQ 601
++Q A+++F L +PNE + SIL+ C + GKQ HG
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527
Query: 602 ENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEM 646
+ +SSALL MY+ K +W+SMIS Y HG+ +A+++F EM
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 647 CNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGK 706
++ + I + +AC+H+GLV+EG +Y++ M+ + + P EH+ C+VD+ R+G+
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 707 LQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNM 766
L++A + I+N+P +W +L+AC H T++G+ AE + ++PE+ Y+ LSNM
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707
Query: 767 YVALGRWKDAVEIGK 781
Y G W++ ++ K
Sbjct: 708 YAESGDWQERAKVRK 722
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 174/662 (26%), Positives = 314/662 (47%), Gaps = 68/662 (10%)
Query: 92 GRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLH 151
GR +HC IK G + D S+ V+ Y K + F M + V+W T++SG
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 152 NNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYV 211
N+ ++ L F M G Q ++ + ++A+ A G G +H + +K G + + +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--I 229
Query: 212 SVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQL- 270
V+NSLI++Y +CG++ A F K VV+WN++I G+A NG EA + + M+L
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 271 -MRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSL 329
+R E A+V I LCA+ LR +H ++ +D + +LM YSK ++
Sbjct: 290 YVRLSESSFASV---IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 330 SKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLY---LCSQFSFSTLLAI 374
A LF I + ++VSW +MISG LF EM ++F++S +L
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 375 LPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSD 434
LP + E +H +K + ++ AL+ Y+ G + A + I + D
Sbjct: 407 LPVISPSE-------VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKD 458
Query: 435 TSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAF-EGKSL 493
W+ ++ Q G + AIK F +T + P+ T ++++ C + +GK
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 494 HGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAE 553
HG A+KS + V +AL+TMY + +I+SA VF+ +L +WN MIS ++Q+
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 577
Query: 554 VRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSAL 610
++AL++F+ + + + + ++ + + +ACT G++ G++ F +
Sbjct: 578 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEK----YFDI------------ 621
Query: 611 LDMYSNCK---SNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSV-ISLLSACS 666
M +CK + S M+ Y G+ +A+++ M N P S++ ++L+AC
Sbjct: 622 --MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN----PAGSTIWRTILAACR 675
Query: 667 HSGLVDEGLQYYNNMLEEYDVRPE-TEHHVCIVDMLGRSGKLQE---AYEFIKNLPIQPK 722
+ G ++ ++PE + +V + +M SG QE + + ++ +
Sbjct: 676 VHKKTELGRLAAEKIIA---MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKE 732
Query: 723 PG 724
PG
Sbjct: 733 PG 734
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 152/595 (25%), Positives = 274/595 (46%), Gaps = 31/595 (5%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GFL + TSL+ Y S F+ +F E ++VVTW +I+ N L F
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M EG + +S T + L + +G VH + +K G+ + N +N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
G++ + F V+WN+++SG N + L F M + + S +S +
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC-K 240
A L EL + + +H +K G+ ++ +L+ YS+C + A R F + C
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQ--NIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
+VVSW A+I GF N EEA DL EM+ + V P+ T +++ +L + V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMK-RKGVRPNEFTYSVILT----ALPVISPSEV 415
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------ 354
H ++ + +L+D Y K + +A +F+ I D+V+W++M++G
Sbjct: 416 HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGE 474
Query: 355 ------LFKEML---YLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
+F E+ ++F+FS++L + + N+ S+ GK H + +K ++
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA--SMGQGKQFHGFAIKSRLDSSLCV 532
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
+AL+ MY G++ +A + +R D WN +I Q+G +A+ FK M +++
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEM-KKR 590
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA-LITMYGRCRDIKS 524
D VT + V +AC + L EG+ + ++ T+ N+ ++ +Y R ++
Sbjct: 591 KVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 650
Query: 525 ASTVFESCYNCNLCT-WNCMISAFS-QNKAEVRALELFRHLEFEPNEISIVSILS 577
A V E+ N T W +++A K E+ L + + +P + + +LS
Sbjct: 651 AMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 705
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 312/625 (49%), Gaps = 47/625 (7%)
Query: 195 VIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFAL 254
+ H IK G YVS N ++ Y + G + A F M +D VSWN +I G+
Sbjct: 21 LTHCYAIKCGSISDIYVS--NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 255 NGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLL 314
GK E+A+ L M+ S + D + L+ A G VHG I+ ++
Sbjct: 79 CGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 315 MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQF-------- 366
+ +SL+D Y+K + A F I+ N VSWN++I+G F ++ + + F
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNS-VSWNALIAG-FVQVRDIKTAFWLLGLMEM 195
Query: 367 ---------SFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
+F+ LL +L + P K +H LKLG + NA++ Y +CG
Sbjct: 196 KAAVTMDAGTFAPLLTLL---DDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
+ A + + + D WN +I +++ + A + F M Q+ D T +
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGL 311
Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGR--CRDIKSASTVFESCYNC 535
+SAC E GKSLHG+ +K + T NALI+MY + ++ A ++FES +
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIH 592
+L +WN +I+ F+Q A++ F +L E + ++ + ++L +C+ L L+ G+QIH
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Query: 593 GHVFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKG 636
GF N F+ S+L+ MYS C S AW++MI Y HG G
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLG 491
Query: 637 WEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVC 696
+++LF +MCN ++ + ++L+ACSH+GL+ EGL+ N M Y ++P EH+
Sbjct: 492 QVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAA 551
Query: 697 IVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPEN 756
VD+LGR+G + +A E I+++P+ P P V L C G+ +M QVA L ++EPE+
Sbjct: 552 AVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPED 611
Query: 757 VGYYISLSNMYVALGRWKDAVEIGK 781
Y+SLS+MY L +W++ + K
Sbjct: 612 HFTYVSLSHMYSDLKKWEEKASVKK 636
Score = 229 bits (585), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 182/653 (27%), Positives = 301/653 (46%), Gaps = 47/653 (7%)
Query: 94 VVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNN 153
+ HC +IK G I+D + N ++ Y K G L + F M D+VSWNT++SG
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
E F M SG D S S + A + G+ +H L IK GYE + YV
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG- 139
Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS 273
+SL+ MY++C +E A AF ++ + VSWNA+I GF + AF LL M++ +
Sbjct: 140 -SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAA 198
Query: 274 VEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAE 333
V D T L++L D + + VH ++ L +++ + N+++ Y+ S+S A+
Sbjct: 199 VTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAK 258
Query: 334 LLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSP 381
+F+ + DL+SWNSMI+G LF +M + T +L +C+
Sbjct: 259 RVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 382 ESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYIN--CGDLVAAFSLLQRISHNSDTSCWN 439
E FGKS+H +K G T NAL+ MYI G + A SL + + + D WN
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK-SKDLISWN 377
Query: 440 IVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK 499
+I Q G ++A+K F S + D ++ +C +L G+ +H LA K
Sbjct: 378 SIITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 500 SLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCN-LCTWNCMISAFSQNKAEVRALE 558
S + V ++LI MY +C I+SA F+ + + WN MI ++Q+ +L+
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496
Query: 559 LFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYS 615
LF + + + ++ +IL+AC+ G+++ G ++ L E + ++ Y
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL------LNLMEPVYKIQPRMEHY- 549
Query: 616 NCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGL 675
AA ++ G K E IE + + P + + L C G ++
Sbjct: 550 -----AAAVDLLGRAGLVNKAKELIE------SMPLNPDPMVLKTFLGVCRACGEIEMAT 598
Query: 676 QYYNNMLEEYDVRPETEH-HVCIVDMLGRSGKLQE---AYEFIKNLPIQPKPG 724
Q N++LE + PE +V + M K +E + +K ++ PG
Sbjct: 599 QVANHLLE---IEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPG 648
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 176/674 (26%), Positives = 303/674 (44%), Gaps = 74/674 (10%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G ++ + S +L +Y + + LF E +D V+WN MI+ + F
Sbjct: 30 GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLF 89
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M G D + ++ + + G VH L IK G + + + V+MYAKC
Sbjct: 90 TCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKC 149
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
+ + F + ++VSWN +++G + + M E V++ +
Sbjct: 150 ERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM----EMKAAVTMDAGT 205
Query: 182 AAS--ACLGELSYG---KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
A L + + K +HA +KLG + +++ N++IS Y+ CG + A+R F G
Sbjct: 206 FAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE--ITICNAMISSYADCGSVSDAKRVFDG 263
Query: 237 M-TCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
+ KD++SWN++I GF+ + E AF+L +MQ VE DI T L+S C+
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ-RHWVETDIYTYTGLLSACSGEEHQI 322
Query: 296 EGRSVHGYAIRRLLGYDLLMMNSLMDFYSK--SNSLSKAELLFNAIAPMNDLVSWNSMIS 353
G+S+HG I++ L N+L+ Y + + ++ A LF ++ DL+SWNS+I+
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS-KDLISWNSIIT 381
Query: 354 GLFKEML---------YLCS------QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLG 398
G ++ L YL S ++FS A+L SC+ +L+ G+ IH K G
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS---ALLRSCSDLATLQLGQQIHALATKSG 438
Query: 399 FSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF 458
F +N +++L+ MY CG + +A Q+IS T WN +I+ Q+G Q ++ F
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 459 KSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMY 516
M QN D VT +++AC + L EG L L ++ + + R+++ A + +
Sbjct: 499 SQMC-NQNVKLDHVTFTAILTACSHTGLIQEGLELLNL-MEPVYKIQPRMEHYAAAVDLL 556
Query: 517 GRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSIL 576
GR + NKA+ EL + P+ + + + L
Sbjct: 557 GRAGLV---------------------------NKAK----ELIESMPLNPDPMVLKTFL 585
Query: 577 SACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKS---NAAWSSMISAYGYH 633
C G + Q+ H+ + E+ F +L MYS+ K A+ M+ G
Sbjct: 586 GVCRACGEIEMATQVANHLLEIE-PEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVK 644
Query: 634 G-KGWEAIELFHEM 646
GW IE+ +++
Sbjct: 645 KVPGWSWIEIRNQV 658
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 283/585 (48%), Gaps = 106/585 (18%)
Query: 298 RSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA----------------- 340
R VH I+ ++ + N L+D YSK SL +F+ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 341 -------------PMNDLVSWNSMISGLFK-----EML----------YLCSQFSFSTLL 372
P D +WNSM+SG + E L ++ +++SF++
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS-- 157
Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHN 432
+L +C+ + G +H K F ++ +AL+ MY CG++ A + +
Sbjct: 158 -VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 433 SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKS 492
+ S WN +I QNG EA+ F+ M + + PD VTL +VISAC +L G+
Sbjct: 217 NVVS-WNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQE 274
Query: 493 LHGLALKS-LMGLDTRVQNALITMYGRCRDIKSASTVFESC------------------- 532
+HG +K+ + D + NA + MY +C IK A +F+S
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 533 ------------YNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILS 577
N+ +WN +I+ ++QN AL LF L+ E P S +IL
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 578 ACTQLGVLRHGKQIHGHVFHLGF------QENSFISSALLDMYSNC-------------- 617
AC L L G Q H HV GF +++ F+ ++L+DMY C
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 618 -KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQ 676
+ +W++MI + +G G EA+ELF EM SG +P ++I +LSAC H+G V+EG
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 677 YYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHH 736
Y+++M ++ V P +H+ C+VD+LGR+G L+EA I+ +P+QP +WG++L+AC H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 737 GDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
+ +GK VAE L ++EP N G Y+ LSNMY LG+W+D + + K
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRK 619
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 225/485 (46%), Gaps = 97/485 (20%)
Query: 93 RVVHCLSIKAGMIADSSLCNVFVNMYAKCGD----------------------------- 123
R VH IK+G + + N ++ Y+KCG
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 124 --LNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
L+ ++ F M D +WN+++SG ++ E+ L YF M G + S +S +
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVS---VTNSLISMYSQCGDIEAAERAFWGMT 238
+A + L +++ G +H+L K SP++S + ++L+ MYS+CG++ A+R F M
Sbjct: 160 SACSGLNDMNKGVQVHSLIAK-----SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
++VVSWN++I F NG EA D+ +M L VEPD T+ ++IS CA ++ G+
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQ 273
Query: 299 SVHGYAIRR-LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMN-------------- 343
VHG ++ L D+++ N+ +D Y+K + + +A +F+++ N
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 344 ----------------DLVSWNSMISG---------------LFKEMLYLCSQFSFSTLL 372
++VSWN++I+G L K + +SF+
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN-- 391
Query: 373 AILPSCNSPESLEFGKSIHCWQLKLGFS------NNTIGVNALMHMYINCGDLVAAFSLL 426
IL +C L G H LK GF ++ N+L+ MY+ CG + + +
Sbjct: 392 -ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 427 QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLEL 486
+++ D WN +I+ QNG+ EA++ F+ M + PD +T++ V+SACG+
Sbjct: 451 RKMMER-DCVSWNAMIIGFAQNGYGNEALELFREML-ESGEKPDHITMIGVLSACGHAGF 508
Query: 487 AFEGK 491
EG+
Sbjct: 509 VEEGR 513
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 226/496 (45%), Gaps = 71/496 (14%)
Query: 9 TSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
T S++T + + + + + +LF +D TWN+M++ ++ L +F M +EG
Sbjct: 88 TWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEG 147
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
+ + ++SA + +N + +G VH L K+ ++D + + V+MY+KCG++N ++
Sbjct: 148 FVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQ 207
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPE-KCLLYFREMGWSGEQADNVSLSSAVAASACL 187
F M + VSWN++++ C N P + L F+ M S + D V+L+S ++A A L
Sbjct: 208 RVFDEMGDRNVVSWNSLIT-CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASL 266
Query: 188 GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDI-------------------- 227
+ G+ +H +K + + ++N+ + MY++C I
Sbjct: 267 SAIKVGQEVHGRVVKNDKLRNDII-LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 228 -----------EAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEP 276
+AA F M ++VVSWNA+I G+ NG+ EEA L ++ SV P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK-RESVCP 384
Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY------DLLMMNSLMDFYSKSNSLS 330
+ ++ CAD L G H + ++ + D+ + NSL+D Y K +
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 331 KAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSC 378
+ L+F + D VSWN+MI G LF+EML + T++ +L +C
Sbjct: 445 EGYLVFRKMME-RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC 503
Query: 379 NSPESLEFGKSIHCWQLKLGFSNNT--IGVNALMHMYI-------NCGDLVAAFSLLQRI 429
+E G+ FS+ T GV L Y G L A S+++ +
Sbjct: 504 GHAGFVEEGRHY--------FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 430 SHNSDTSCWNIVIVAC 445
D+ W ++ AC
Sbjct: 556 PMQPDSVIWGSLLAAC 571
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 148/624 (23%), Positives = 261/624 (41%), Gaps = 121/624 (19%)
Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDG 251
Y + +HA IK G+ + ++ N LI YS+CG +E + F M +++ +WN+++ G
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQ--NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTG 95
Query: 252 FALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLIS-----------LCADSLLLREGRSV 300
G +EA L M E D T +++S LC +++ +EG +
Sbjct: 96 LTKLGFLDEADSLFRSMP-----ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL 150
Query: 301 HGYAIRRLLGY------------------------DLLMMNSLMDFYSKSNSLSKAELLF 336
+ Y+ +L D+ + ++L+D YSK +++ A+ +F
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 337 NAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCNSPESL 384
+ + N +VSWNS+I+ +F+ ML + TL +++ +C S ++
Sbjct: 211 DEMGDRN-VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 269
Query: 385 EFGKSIHCWQLK-LGFSNNTIGVNALMHMYINCG---------------DLVAAFSLLQR 428
+ G+ +H +K N+ I NA + MY C +++A S++
Sbjct: 270 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 329
Query: 429 ISHNSDTSC---------------WNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
+ + T WN +I TQNG +EA+ F + ++++ P +
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLKRESVCPTHYS 388
Query: 474 LVNVISACGNLELAFEGKSLH------GLALKSLMGLDTRVQNALITMYGRCRDIKSAST 527
N++ AC +L G H G +S D V N+LI MY +C ++
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 528 VFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGV 584
VF + +WN MI F+QN ALELFR + +P+ I+++ +LSAC G
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 585 LRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFH 644
+ G+ + F + L D Y + M+ G G EA +
Sbjct: 509 VEEGRH------YFSSMTRDFGVAPLRDHY---------TCMVDLLGRAGFLEEAKSMIE 553
Query: 645 EMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE-HHVCIVDMLGR 703
EM ++P SLL+AC + G +LE V P +V + +M
Sbjct: 554 EM---PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE---VEPSNSGPYVLLSNMYAE 607
Query: 704 SGKLQEAYEFIKNLP---IQPKPG 724
GK ++ K++ + +PG
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPG 631
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 184/417 (44%), Gaps = 40/417 (9%)
Query: 3 FLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFG 62
FL+ + ++L+ YS + +F E +++VV+WN++IT +N V L F
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 63 EMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIA-DSSLCNVFVNMYAKC 121
M+E + D TL ++SA ++ +K G+ VH +K + D L N FV+MYAKC
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302
Query: 122 GDLNSSECTFSGMHCADT-------------------------------VSWNTIMSGCL 150
+ + F M + VSWN +++G
Sbjct: 303 SRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 362
Query: 151 HNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYE---- 206
N E+ L F + + S ++ + A A L EL G H +K G++
Sbjct: 363 QNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSG 422
Query: 207 DSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLH 266
+ + V NSLI MY +CG +E F M +D VSWNA+I GFA NG EA +L
Sbjct: 423 EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 267 EMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLM--MNSLMDFYS 324
EM L +PD T++ ++S C + + EGR ++ R G L ++D
Sbjct: 483 EM-LESGEKPDHITMIGVLSACGHAGFVEEGRHYFS-SMTRDFGVAPLRDHYTCMVDLLG 540
Query: 325 KSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSP 381
++ L +A+ + + D V W S+++ ++ LL + PS + P
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP 597
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 206/476 (43%), Gaps = 92/476 (19%)
Query: 364 SQFSFSTLLA-ILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVA 421
S F+ S+ A +L SC S S + + +H +K GFSN N L+ Y CG L
Sbjct: 14 SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73
Query: 422 AFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSV--------- 472
+ ++ + WN V+ T+ G EA F+SM ++ + +S+
Sbjct: 74 GRQVFDKMPQR-NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 473 ---------------------TLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNA 511
+ +V+SAC L +G +H L KS D + +A
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 512 LITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHL---EFEPN 568
L+ MY +C ++ A VF+ + N+ +WN +I+ F QN V AL++F+ + EP+
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 569 EISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFI-SSALLDMYSNC---------- 617
E+++ S++SAC L ++ G+++HG V N I S+A +DMY+ C
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 618 ------------------------------------KSNAAWSSMISAYGYHGKGWEAIE 641
++ +W+++I+ Y +G+ EA+
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 642 LFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVCI--- 697
LF + + PT S ++L AC+ + G+Q + ++L+ + + E + +
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 698 -VDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKL 752
+DM + G ++E Y + + ++ W AM+ + +G G + EL ++
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNG---YGNEALELFREM 484
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 166/377 (44%), Gaps = 56/377 (14%)
Query: 454 AIKTFKSMTQQQNASPDSVTLVNVISACGNLEL-AFEGKSLHGLALKSLMGLDTRVQNAL 512
A K+F + ++ DS ++ +C +L A + +H +KS + +QN L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 513 ITMYGRCRDIKSASTVFESCYNCNL-------------------------------CTWN 541
I Y +C ++ VF+ N+ CTWN
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 542 CMISAFSQNKAEVRALELFR--HLE-FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHL 598
M+S F+Q+ AL F H E F NE S S+LSAC+ L + G Q+H +
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 599 GFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELF 643
F + +I SAL+DMYS C ++ +W+S+I+ + +G EA+++F
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241
Query: 644 HEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGR 703
M S + P + ++ S++SAC+ + G + + +++ +R + VDM +
Sbjct: 242 QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAK 301
Query: 704 SGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLF-KLEPENVGYYIS 762
+++EA ++PI+ +M+S + TK A L+F K+ NV + +
Sbjct: 302 CSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTK----AARLMFTKMAERNVVSWNA 356
Query: 763 LSNMYVALGRWKDAVEI 779
L Y G ++A+ +
Sbjct: 357 LIAGYTQNGENEEALSL 373
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 278/526 (52%), Gaps = 36/526 (6%)
Query: 283 TLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAP- 341
L+++ + + L + VH I ++++ +SL + Y +SN L A FN I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 342 MNDLVSWNSMISG--------------LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG 387
+ SWN+++SG L+ M C L+ + +C LE G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 388 KSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQ 447
IH +K G + +L+ MY G + +A + I ++ W +++ +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWGVLMKGYLK 187
Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALK-SLMGLDT 506
E + F + + + D++TL+ ++ ACGN+ GK +HG++++ S +
Sbjct: 188 YSKDPEVFRLF-CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD 246
Query: 507 RVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE 566
+Q ++I MY +CR + +A +FE+ + N+ W +IS F++ + V A +LFR + E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 567 ---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC------ 617
PN+ ++ +IL +C+ LG LRHGK +HG++ G + ++ ++ +DMY+ C
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMA 366
Query: 618 ---------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHS 668
++ +WSSMI+A+G +G EA++ FH+M + + P + +SLLSACSHS
Sbjct: 367 RTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHS 426
Query: 669 GLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGA 728
G V EG + + +M +Y V PE EH+ C+VD+LGR+G++ EA FI N+P++P WGA
Sbjct: 427 GNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGA 486
Query: 729 MLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWK 774
+LSAC H + + ++AE L +EPE Y+ LSN+Y G W+
Sbjct: 487 LLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 258/551 (46%), Gaps = 39/551 (7%)
Query: 79 IVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHC-- 136
+++ L+Q L + VH I G + L + N Y + L+ + +F+ + C
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 137 ADTVSWNTIMSGCLHNN---YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYG 193
+ SWNTI+SG + Y + LLY R M + D+ +L A+ A LG L G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNR-MRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFA 253
+IH L +K G + YV+ SL+ MY+Q G +E+A++ F + ++ V W ++ G+
Sbjct: 129 ILIHGLAMKNGLDKDDYVA--PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 254 LNGKFEEAFDLLHEMQLMRS--VEPDIATVVTLISLCADSLLLREGRSVHGYAIRR-LLG 310
K E F L LMR + D T++ L+ C + + G+ VHG +IRR +
Sbjct: 187 KYSKDPEVFRLF---CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKE 358
+ S++D Y K L A LF N +V W ++ISG LF++
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRN-VVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
ML + TL AIL SC+S SL GKS+H + ++ G + + + + MY CG+
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
+ A ++ + + S W+ +I A NG F+EA+ F M + QN P+SVT V+++
Sbjct: 363 IQMARTVFDMMPERNVIS-WSSMINAFGINGLFEEALDCFHKM-KSQNVVPNSVTFVSLL 420
Query: 479 SACGNLELAFEG-KSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
SAC + EG K + + + ++ + GR +I A + ++ +
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 538 CT-WNCMISAFSQNKAEVRALELF-RHLEFEPNEISIVSILSAC-------TQLGVLRHG 588
+ W ++SA +K A E+ + L EP + S+ +LS + +R
Sbjct: 481 ASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRK 540
Query: 589 KQIHGHVFHLG 599
I G+ H+G
Sbjct: 541 MGIKGYRKHVG 551
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 226/504 (44%), Gaps = 23/504 (4%)
Query: 2 GFLAHLPTSTSLLTAY--SNVSYFESSLALFYETCNKDVVTWNAMITACVENR--CVVMG 57
GF + +SL AY SN F +S ++ +WN +++ +++ C
Sbjct: 34 GFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDV 93
Query: 58 LHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNM 117
L + M DS L+ + A + L+ G ++H L++K G+ D + V M
Sbjct: 94 LLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEM 153
Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
YA+ G + S++ F + ++V W +M G L + + F M +G D ++L
Sbjct: 154 YAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTL 213
Query: 178 SSAVAASACLGELSYGKVIHALGIKLGYED-SPYVSVTNSLISMYSQCGDIEAAERAFWG 236
V A + GK +H + I+ + D S Y+ S+I MY +C ++ A + F
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA--SIIDMYVKCRLLDNARKLFET 271
Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE 296
++VV W +I GFA + EAFDL +M L S+ P+ T+ ++ C+ LR
Sbjct: 272 SVDRNVVMWTTLISGFAKCERAVEAFDLFRQM-LRESILPNQCTLAAILVSCSSLGSLRH 330
Query: 297 GRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSM----- 351
G+SVHGY IR + D + S +D Y++ ++ A +F+ + P +++SW+SM
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD-MMPERNVISWSSMINAFG 389
Query: 352 ISGLFKEMLYLCSQFSFS-------TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNT 403
I+GLF+E L + T +++L +C+ +++ G K G
Sbjct: 390 INGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEE 449
Query: 404 IGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTF-KSMT 462
++ + G++ A S + + S W ++ AC + A + K ++
Sbjct: 450 EHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS 509
Query: 463 QQQNASPDSVTLVNVISACGNLEL 486
+ S V L N+ + G E+
Sbjct: 510 MEPEKSSVYVLLSNIYADAGMWEM 533
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/504 (31%), Positives = 271/504 (53%), Gaps = 38/504 (7%)
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL------------FKE 358
+ +L N ++ ++ K + +A LF+ + P D+V+W +MI+G F E
Sbjct: 44 HHILATNLIVSYFEKG-LVEEARSLFDEM-PDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
M+ + + TL ++L SC + + L +G +H +KLG + NA+M+MY C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMT-QQQNASPDSVTLVNV 477
+ A L+ R + W +I T G +K +K M + +P +T+
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA-- 219
Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNL 537
+ A +++ GK +H +K + V N+++ +Y RC + A F + +L
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 538 CTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGH 594
TWN +IS ++ + AL +F+ E F PN + S+++AC + L G+Q+HG
Sbjct: 280 ITWNTLISELERSDSS-EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 595 VFHLGFQENSFISSALLDMYSNC----------------KSNAAWSSMISAYGYHGKGWE 638
+F GF +N +++AL+DMY+ C ++ +W+SM+ YG HG G E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 639 AIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIV 698
A+ELF +M +SGIRP + +++LSAC H+GLV++GL+Y+N M EY + P+ + + C+V
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 699 DMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSAC-SHHGDTKMGKQVAELLFKLEPENV 757
D+LGR+GK+ EAYE ++ +P +P WGA+L AC +H + + + A + +L+P+ V
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 758 GYYISLSNMYVALGRWKDAVEIGK 781
G Y+ LS +Y A G+W D + K
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRK 542
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 218/459 (47%), Gaps = 18/459 (3%)
Query: 6 HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
H +T+L+ +Y E + +LF E ++DVV W AMIT + F EMV
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 66 EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
++G + TL ++ + M L G +VH + +K GM + N +NMYA C
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 126 SSEC-TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAAS 184
+ C F + + V+W T+++G H L +++M + ++ AV AS
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRAS 223
Query: 185 ACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS 244
A + ++ GK IHA IK G++ + + V NS++ +Y +CG + A+ F M KD+++
Sbjct: 224 ASIDSVTTGKQIHASVIKRGFQSN--LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
WN +I + EA + + V P+ T +L++ CA+ L G+ +HG
Sbjct: 282 WNTLISELERSDS-SEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG---------- 354
RR ++ + N+L+D Y+K ++ ++ +F I +LVSW SM+ G
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 355 --LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVNALMH 411
LF +M+ + +A+L +C +E G K + + + G + + N ++
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 412 MYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGH 450
+ G + A+ L++R+ D S W ++ AC + H
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKH 498
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 43/487 (8%)
Query: 205 YEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDL 264
Y+ + + +LI Y + G +E A F M +DVV+W A+I G+A + A++
Sbjct: 39 YKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWEC 98
Query: 265 LHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYS 324
HEM + + P+ T+ +++ C + +L G VHG ++ + L + N++M+ Y+
Sbjct: 99 FHEM-VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 325 K-SNSLSKAELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTL 371
S ++ A L+F I ND V+W ++I+G ++K+ML ++ + +
Sbjct: 158 TCSVTMEAACLIFRDIKVKND-VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCI 216
Query: 372 LAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISH 431
+ + S +S+ GK IH +K GF +N +N+++ +Y CG L A +
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM-E 275
Query: 432 NSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGK 491
+ D WN +I ++ EA+ F+ + Q P+ T ++++AC N+ G+
Sbjct: 276 DKDLITWNTLISELERSDS-SEALLMFQRF-ESQGFVPNCYTFTSLVAACANIAALNCGQ 333
Query: 492 SLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVF-ESCYNCNLCTWNCMISAFSQN 550
LHG + + + NALI MY +C +I + VF E NL +W M+ + +
Sbjct: 334 QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Query: 551 KAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFIS 607
A+ELF + P+ I +++LSAC G++ G + + E+ +
Sbjct: 394 GYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK------YFNVMESEYGI 447
Query: 608 SALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSAC-- 665
+ D+Y NC ++ G GK EA EL M +P +S+ ++L AC
Sbjct: 448 NPDRDIY-NC--------VVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKA 495
Query: 666 -SHSGLV 671
H+GL+
Sbjct: 496 HKHNGLI 502
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RGF ++LP S+L Y Y + F+E +KD++TWN +I+ +E L
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLM 300
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F +G + T +V+A + L G+ +H + G + L N ++MYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 121 CGDLNSSECTFSGM-HCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
CG++ S+ F + + VSW ++M G + Y + + F +M SG + D + +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 180 AVAASACLGELSYG-KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
++A G + G K + + + G +P + N ++ + + G I A M
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGI--NPDRDIYNCVVDLLGRAGKIGEAYELVERMP 478
Query: 239 CK-DVVSWNAII 249
K D +W AI+
Sbjct: 479 FKPDESTWGAIL 490
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 307/620 (49%), Gaps = 41/620 (6%)
Query: 194 KVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGF 252
K++H + LG V + SLI++Y C D +A F + DV WN+++ G+
Sbjct: 24 KLVHQRILTLGLRRD--VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGY 81
Query: 253 ALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLRE--GRSVHGYAIRRLLG 310
+ N F + ++ + PD T +I A L RE GR +H ++
Sbjct: 82 SKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK--AYGALGREFLGRMIHTLVVKSGYV 139
Query: 311 YDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLYLCSQ 365
D+++ +SL+ Y+K N + +F+ + P D+ SWN++IS ++ + L L +
Sbjct: 140 CDVVVASSLVGMYAKFNLFENSLQVFDEM-PERDVASWNTVISCFYQSGEAEKALELFGR 198
Query: 366 FSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
S +L + +C+ LE GK IH +K GF + +AL+ MY C
Sbjct: 199 MESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDC 258
Query: 419 LVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVI 478
L A + Q++ S + WN +I G + ++ M + P TL +++
Sbjct: 259 LEVAREVFQKMPRKSLVA-WNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSIL 316
Query: 479 SACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLC 538
AC GK +HG ++S++ D V +LI +Y +C + A TVF
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE 376
Query: 539 TWNCMISAFSQNKAEVRALELFRHL---EFEPNEISIVSILSACTQLGVLRHGKQIHGHV 595
+WN MIS++ +A+E++ + +P+ ++ S+L AC+QL L GKQIH +
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 596 FHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAI 640
+ + + SALLDMYS C K +W+ MISAYG HG+ EA+
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREAL 496
Query: 641 ELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM 700
F EM G++P +++++LSAC H+GL+DEGL++++ M +Y + P EH+ C++D+
Sbjct: 497 YQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDI 556
Query: 701 LGRSGKLQEAYEFIKNLP-IQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGY 759
LGR+G+L EAYE I+ P + + SAC H + +G ++A LL + P++
Sbjct: 557 LGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDAST 616
Query: 760 YISLSNMYVALGRWKDAVEI 779
Y+ L N+Y + W A +
Sbjct: 617 YMVLFNLYASGESWDAARRV 636
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 252/510 (49%), Gaps = 24/510 (4%)
Query: 37 DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRF-DSTTLLIIVSALTQMNCLKQGRVV 95
DV WN++++ +N L F ++ I DS T ++ A + GR++
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 96 HCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYP 155
H L +K+G + D + + V MYAK +S F M D SWNT++S +
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 156 EKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTN 215
EK L F M SG + ++VSL+ A++A + L L GK IH +K G+E YV+ +
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN--S 247
Query: 216 SLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVE 275
+L+ MY +C +E A F M K +V+WN++I G+ G + ++L+ M ++
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM-IIEGTR 306
Query: 276 PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELL 335
P T+ +++ C+ S L G+ +HGY IR ++ D+ + SL+D Y K + AE +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 336 FNAIAPMNDLV-SWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCNSPE 382
F+ D+ SWN MIS ++ +M+ + + T ++LP+C+
Sbjct: 367 FS--KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 383 SLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
+LE GK IH + + + ++AL+ MY CG+ AF + I D W ++I
Sbjct: 425 ALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
A +G +EA+ F M Q+ PD VTL+ V+SACG+ L EG ++S
Sbjct: 484 SAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS-QMRSKY 541
Query: 503 GLDTRVQN--ALITMYGRCRDIKSASTVFE 530
G++ +++ +I + GR + A + +
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 283/593 (47%), Gaps = 41/593 (6%)
Query: 72 DSTTLLIIVSALTQ-MNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECT 130
+S+ LL ++ T L++ ++VH + G+ D LC +N+Y C D S+
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 131 FSGMHC-ADTVSWNTIMSGCLHNNYPEKCLLYF-REMGWSGEQADNVSLSSAVAASACLG 188
F +D WN++MSG N+ L F R + S D+ + + + A LG
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
G++IH L +K GY V V +SL+ MY++ E + + F M +DV SWN +
Sbjct: 122 REFLGRMIHTLVVKSGYVCD--VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTV 179
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRL 308
I F +G+ E+A +L M+ EP+ ++ IS C+ L L G+ +H +++
Sbjct: 180 ISCFYQSGEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 309 LGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG------------LF 356
D + ++L+D Y K + L A +F + P LV+WNSMI G +
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKM-PRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 357 KEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVN-ALMHMYIN 415
M+ ++ S +TL +IL +C+ +L GK IH + ++ N I VN +L+ +Y
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFK 356
Query: 416 CGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
CG+ A ++ + + S WN++I + G++ +A++ + M PD VT
Sbjct: 357 CGEANLAETVFSKTQKDVAES-WNVMISSYISVGNWFKAVEVYDQMV-SVGVKPDVVTFT 414
Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNC 535
+V+ AC L +GK +H +S + D + +AL+ MY +C + K A +F S
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 536 NLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIH 592
++ +W MISA+ + AL F ++ +P+ ++++++LSAC G++ G +
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 593 GHVFHLGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHE 645
+ + + +++ Y S MI G G+ EA E+ +
Sbjct: 535 SQM------RSKYGIEPIIEHY---------SCMIDILGRAGRLLEAYEIIQQ 572
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 217/465 (46%), Gaps = 55/465 (11%)
Query: 369 STLLAILPSC-NSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
S LL++L C NS +SL K +H L LG + + +L+++Y C D +A + +
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
SD WN ++ ++N F + ++ FK + PDS T NVI A G L
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
F G+ +H L +KS D V ++L+ MY + +++ VF+ ++ +WN +IS F
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 548 SQNKAEVRALELFRHLE---FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENS 604
Q+ +ALELF +E FEPN +S+ +SAC++L L GK+IH GF+ +
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 605 FISSALLDMYSNC---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNS 649
+++SAL+DMY C KS AW+SMI Y G +E+ + M
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 650 GIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSG---- 705
G RP+++++ S+L ACS S + G ++ + + V + + ++D+ + G
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 706 ------------------------------KLQEAYEFIKNLPIQPKPGVWGAMLSACSH 735
K E Y+ + ++ ++P + ++L ACS
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 736 HGDTKMGKQVAELLFKLEPENVGYYIS-LSNMYVALGRWKDAVEI 779
+ GKQ+ + + E +S L +MY G K+A I
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 245/524 (46%), Gaps = 46/524 (8%)
Query: 279 ATVVTLISLCADSLL-LREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFN 337
+ +++L+ C +S LR + VH + L D+++ SL++ Y A +F
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 338 AIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLAILPSCNSPESLEF----------- 386
+D+ WNS++SG K ++ + F LL S P+S F
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNC--SICVPDSFTFPNVIKAYGALG 121
Query: 387 ----GKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVI 442
G+ IH +K G+ + + ++L+ MY + + + D + WN VI
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER-DVASWNTVI 180
Query: 443 VACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
Q+G ++A++ F M + P+SV+L ISAC L GK +H +K
Sbjct: 181 SCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGF 239
Query: 503 GLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRH 562
LD V +AL+ MYG+C ++ A VF+ +L WN MI + +E+
Sbjct: 240 ELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNR 299
Query: 563 LEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC-K 618
+ E P++ ++ SIL AC++ L HGK IHG+V + +++ +L+D+Y C +
Sbjct: 300 MIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 619 SNAA--------------WSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSA 664
+N A W+ MIS+Y G ++A+E++ +M + G++P + S+L A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 665 CSHSGLVDEGLQYYNNMLEEYDVRPETEHHV--CIVDMLGRSGKLQEAYEFIKNLPIQPK 722
CS +++G Q + ++ E R ET+ + ++DM + G +EA+ ++P +
Sbjct: 420 CSQLAALEKGKQIHLSISES---RLETDELLLSALLDMYSKCGNEKEAFRIFNSIP-KKD 475
Query: 723 PGVWGAMLSACSHHGDTKMG-KQVAELL-FKLEPENVGYYISLS 764
W M+SA HG + Q E+ F L+P+ V LS
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 219/449 (48%), Gaps = 19/449 (4%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G++ + ++SL+ Y+ + FE+SL +F E +DV +WN +I+ ++ L F
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
G M G +S +L + +SA +++ L++G+ +H +K G D + + V+MY KC
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC 256
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAV 181
L + F M V+WN+++ G + + C+ M G + +L+S +
Sbjct: 257 DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL 316
Query: 182 AASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKD 241
A + L +GK IH I+ YV+ SLI +Y +CG+ AE F T KD
Sbjct: 317 MACSRSRNLLHGKFIHGYVIRSVVNADIYVNC--SLIDLYFKCGEANLAETVF-SKTQKD 373
Query: 242 VV-SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
V SWN +I + G + +A ++ +M + V+PD+ T +++ C+ L +G+ +
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 301 HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GL 355
H L D L++++L+D YSK + +A +FN+I P D+VSW MIS G
Sbjct: 433 HLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI-PKKDVVSWTVMISAYGSHGQ 491
Query: 356 FKEMLYL---CSQFSFS----TLLAILPSCNSPESLEFG-KSIHCWQLKLGFSNNTIGVN 407
+E LY +F TLLA+L +C ++ G K + K G +
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 408 ALMHMYINCGDLVAAFSLLQRISHNSDTS 436
++ + G L+ A+ ++Q+ SD +
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPETSDNA 580
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 3/297 (1%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
+GF +++L+ Y E + +F + K +V WN+MI V +
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
M+ EG R TTL I+ A ++ L G+ +H I++ + AD + +++Y K
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
CG+ N +E FS SWN ++S + K + + +M G + D V+ +S
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSV 416
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
+ A + L L GK IH L I ++ + + ++L+ MYS+CG+ + A R F + K
Sbjct: 417 LPACSQLAALEKGKQIH-LSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREG 297
DVVSW +I + +G+ EA EMQ ++PD T++ ++S C + L+ EG
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKF-GLKPDGVTLLAVLSACGHAGLIDEG 530
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 276 bits (706), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 195/627 (31%), Positives = 320/627 (51%), Gaps = 45/627 (7%)
Query: 183 ASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDV 242
A A L L G+ I A +K G+E +VSV NS+ Y +CGD+ + R F M +D
Sbjct: 56 ACAKLSWLFQGRCIQASLLKRGFE--SFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDS 113
Query: 243 VSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHG 302
VSWN I+ G G EE ++++ EP+ +T+V +I C L +G +HG
Sbjct: 114 VSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GFEPNTSTLVLVIHACRS--LWFDGEKIHG 170
Query: 303 YAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG-------- 354
Y IR + NS++ Y+ S+SLS A LF+ ++ D++SW+ +I
Sbjct: 171 YVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE-RDVISWSVVIRSYVQSKEPV 228
Query: 355 ----LFKEMLYLC-SQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NA 408
LFKEM++ ++ T+ ++L +C E ++ G+S+H + ++ GF + V N+
Sbjct: 229 VGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNS 288
Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
L+ MY D+ +AF + + + S WN ++ N + EA++ F M Q+
Sbjct: 289 LIDMYSKGFDVDSAFRVFDETTCRNIVS-WNSILAGFVHNQRYDEALEMFHLMVQEA-VE 346
Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
D VT+V+++ C E KS+HG+ ++ + ++LI Y C + A TV
Sbjct: 347 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 406
Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNEISIVSILSACTQLGVLRHG 588
+S ++ + + MIS + A+ +F H+ PN I+++S+L+AC+ LR
Sbjct: 407 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTS 466
Query: 589 KQIHGHVFHLGFQENSF-ISSALLDMYSNC---------------KSNAAWSSMISAYGY 632
K HG N + ++++D Y+ C K+ +W+ +ISAY
Sbjct: 467 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 526
Query: 633 HGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETE 692
+G +A+ LF EM G P + ++ LSAC+H GLV +GL + +M+EE D +P +
Sbjct: 527 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQ 585
Query: 693 HHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG--VWGAMLSACSHHGDTKM--GKQVAEL 748
H+ CIVDML R+G++ A E IKNLP K G WGA+LS C + + + VAE+
Sbjct: 586 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEV 645
Query: 749 LFKLEPENVGYYISLSNMYVALGRWKD 775
L +LEP Y+ S+ + A W+D
Sbjct: 646 L-ELEPLCSSGYLLASSTFAAEKSWED 671
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 288/585 (49%), Gaps = 36/585 (6%)
Query: 52 RCVVMGLHFFGEMVEEGIRF-DSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSL 110
R VV G + E+ G++F D I+ A +++ L QGR + +K G + S+
Sbjct: 28 REVVSG---YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVSV 84
Query: 111 CNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE 170
N + Y KCGDL S F M+ D+VSWN I+ G L + E+ L +F ++ G
Sbjct: 85 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 144
Query: 171 QADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA 230
+ + +L + AC G+ IH I+ G+ SV NS++ MY+ D +A
Sbjct: 145 EPNTSTL--VLVIHACRSLWFDGEKIHGYVIRSGF--CGISSVQNSILCMYAD-SDSLSA 199
Query: 231 ERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCAD 290
+ F M+ +DV+SW+ +I + + + L EM EPD TV +++ C
Sbjct: 200 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 259
Query: 291 SLLLREGRSVHGYAIRRLLGYDL---LMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVS 347
+ GRSVHG++IRR G+DL + NSL+D YSK + A +F+ N +VS
Sbjct: 260 MEDIDVGRSVHGFSIRR--GFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN-IVS 316
Query: 348 WNSMISGLFK--------EMLYLCSQFSFS----TLLAILPSCNSPESLEFGKSIHCWQL 395
WNS+++G EM +L Q + T++++L C E KSIH +
Sbjct: 317 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 376
Query: 396 KLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAI 455
+ G+ +N + +++L+ Y +C + A ++L +++ SC + +I G EAI
Sbjct: 377 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSC-STMISGLAHAGRSDEAI 435
Query: 456 KTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGL-DTRVQNALIT 514
F M +P+++T++++++AC K HG+A++ + + D V +++
Sbjct: 436 SIFCHMRD----TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 491
Query: 515 MYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE---FEPNEIS 571
Y +C I+ A F+ N+ +W +ISA++ N +AL LF ++ + PN ++
Sbjct: 492 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 551
Query: 572 IVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN 616
++ LSAC G+++ G I + + + S ++DM S
Sbjct: 552 YLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSR 596
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 268/540 (49%), Gaps = 27/540 (5%)
Query: 1 RGFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHF 60
RGF + + S+ Y S L F ++D V+WN ++ ++ GL +
Sbjct: 76 RGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWW 135
Query: 61 FGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAK 120
F ++ G +++TL++++ A + G +H I++G SS+ N + MYA
Sbjct: 136 FSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD 193
Query: 121 CGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGE-QADNVSLSS 179
L++ + F M D +SW+ ++ + + P L F+EM + + D V+++S
Sbjct: 194 SDSLSARK-LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 252
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+ A + ++ G+ +H I+ G+ D V V NSLI MYS+ D+++A R F TC
Sbjct: 253 VLKACTVMEDIDVGRSVHGFSIRRGF-DLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC 311
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
+++VSWN+I+ GF N +++EA ++ H M + +VE D TVV+L+ +C +S
Sbjct: 312 RNIVSWNSILAGFVHNQRYDEALEMFHLM-VQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 370
Query: 300 VHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL---- 355
+HG IRR + + ++SL+D Y+ + + A + +++ D+VS ++MISGL
Sbjct: 371 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT-YKDVVSCSTMISGLAHAG 429
Query: 356 -----FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV-NAL 409
++ + T++++L +C+ L K H ++ + N I V ++
Sbjct: 430 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSI 489
Query: 410 MHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASP 469
+ Y CG + A +I+ + S W ++I A NG +A+ F M +Q+ +P
Sbjct: 490 VDAYAKCGAIEMARRTFDQITEKNIIS-WTVIISAYAINGLPDKALALFDEM-KQKGYTP 547
Query: 470 DSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQ----NALITMYGRCRDIKSA 525
++VT + +SAC + L +G + KS++ D + + ++ M R +I +A
Sbjct: 548 NAVTYLAALSACNHGGLVKKGL----MIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 603
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 231/485 (47%), Gaps = 27/485 (5%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF S+L Y++ S+ LF E +DV++W+ +I + V+++ V+GL F
Sbjct: 176 GFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLF 234
Query: 62 GEMVEEG-IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGM-IADSSLCNVFVNMYA 119
EMV E D T+ ++ A T M + GR VH SI+ G +AD +CN ++MY+
Sbjct: 235 KEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYS 294
Query: 120 KCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSS 179
K D++S+ F C + VSWN+I++G +HN ++ L F M + D V++ S
Sbjct: 295 KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS 354
Query: 180 AVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTC 239
+ + K IH + I+ GYE + +SLI Y+ C ++ A MT
Sbjct: 355 LLRVCKFFEQPLPCKSIHGVIIRRGYESNEV--ALSSLIDAYTSCSLVDDAGTVLDSMTY 412
Query: 240 KDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRS 299
KDVVS + +I G A G+ +EA + M+ P+ TV++L++ C+ S LR +
Sbjct: 413 KDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKW 468
Query: 300 VHGYAIRRLLGY-DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
HG AIRR L D+ + S++D Y+K ++ A F+ I N ++SW +IS
Sbjct: 469 AHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKN-IISWTVIISAYAIN 527
Query: 354 -------GLFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGV 406
LF EM + T LA L +CN ++ G I ++ +
Sbjct: 528 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY 587
Query: 407 NALMHMYINCGDLVAAFSLLQRISHN--SDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
+ ++ M G++ A L++ + + + S W ++ C F++ I T + + +
Sbjct: 588 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC--RNRFKKLIITSEVVAEV 645
Query: 465 QNASP 469
P
Sbjct: 646 LELEP 650
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 188/391 (48%), Gaps = 23/391 (5%)
Query: 1 RGF-LAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLH 59
RGF LA + SL+ YS +S+ +F ET +++V+WN+++ V N+ L
Sbjct: 276 RGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE 335
Query: 60 FFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQG---RVVHCLSIKAGMIADSSLCNVFVN 116
F MV+E + D T +VS L +Q + +H + I+ G ++ + ++
Sbjct: 336 MFHLMVQEAVEVDEVT---VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLID 392
Query: 117 MYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
Y C ++ + M D VS +T++SG H ++ + F M + +S
Sbjct: 393 AYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVIS 452
Query: 177 LSSAVAASACLGELSYGKVIHALGIK--LGYEDSPYVSVTNSLISMYSQCGDIEAAERAF 234
L +A + SA +L K H + I+ L D +SV S++ Y++CG IE A R F
Sbjct: 453 LLNACSVSA---DLRTSKWAHGIAIRRSLAIND---ISVGTSIVDAYAKCGAIEMARRTF 506
Query: 235 WGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLL 294
+T K+++SW II +A+NG ++A L EM+ + P+ T + +S C L+
Sbjct: 507 DQITEKNIISWTVIISAYAINGLPDKALALFDEMK-QKGYTPNAVTYLAALSACNHGGLV 565
Query: 295 REGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKA-ELLFNAIAPMNDLVS-WNSMI 352
++G + + L + ++D S++ + A EL+ N + S W +++
Sbjct: 566 KKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 625
Query: 353 SG---LFKEMLYLCSQFSFSTLLAILPSCNS 380
SG FK+++ + S+ + +L + P C+S
Sbjct: 626 SGCRNRFKKLI-ITSEV-VAEVLELEPLCSS 654
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 448 NGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTR 507
+G ++E + + + + D V AC L F+G+ + LK
Sbjct: 24 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRGFESFVS 83
Query: 508 VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLE--- 564
V N++ Y +C D+ S F+ + + +WN ++ E L F L
Sbjct: 84 VGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 143
Query: 565 FEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSNAA-- 622
FEPN ++V ++ AC L G++IHG+V GF S + +++L MY++ S +A
Sbjct: 144 FEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARK 201
Query: 623 ------------WSSMISAYGYHGKGWEAIELFHEMCNSG-IRPTKSSVISLLSACSHSG 669
WS +I +Y + ++LF EM + P +V S+L AC+
Sbjct: 202 LFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME 261
Query: 670 LVDEG 674
+D G
Sbjct: 262 DIDVG 266
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 165/541 (30%), Positives = 289/541 (53%), Gaps = 48/541 (8%)
Query: 281 VVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIA 340
+V+++ +C L +G VH Y ++ G +L+ N L+D Y K A +F+++
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM- 67
Query: 341 PMNDLVSWNSMISG------------LFKEM----LYLCSQFSFSTLLAILPSCNSPESL 384
P ++VSW++++SG LF EM +Y ++F+FST L +C +L
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFST---NLKACGLLNAL 123
Query: 385 EFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVA 444
E G IH + LK+GF N+L+ MY CG + A + +RI S S WN +I
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS-WNAMIAG 182
Query: 445 CTQNGHFQEAIKTFKSMTQQQN--ASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLM 502
G+ +A+ TF M Q+ N PD TL +++ AC + + + GK +HG ++S
Sbjct: 183 FVHAGYGSKALDTF-GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 503 GLDTR--VQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAFSQNKAEVRALELF 560
+ + +L+ +Y +C + SA F+ + +W+ +I ++Q V A+ LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 561 RHLEFEPNEI---SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNC 617
+ L+ ++I ++ SI+ +LR GKQ+ L + + ++++DMY C
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 618 ---------------KSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLL 662
K +W+ +I+ YG HG G +++ +F+EM I P + +++L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 663 SACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPK 722
SACSHSG++ EG + ++ +LE + ++P EH+ C+VD+LGR+G+L+EA I +PI+P
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 723 PGVWGAMLSACSHHGDTKMGKQVAELLFKLEPENVGYYISLSNMYVALGRWKD---AVEI 779
G+W +LS C HGD ++GK+V ++L +++ +N Y+ +SN+Y G W + A E+
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Query: 780 G 780
G
Sbjct: 542 G 542
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 234/493 (47%), Gaps = 34/493 (6%)
Query: 76 LLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMH 135
L+ I+ T+ QG VHC +K+G + N ++MY KC + + F M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 136 CADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKV 195
+ VSW+ +MSG + N + L F EMG G + + S+ + A L L G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 196 IHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALN 255
IH +K+G+E V V NSL+ MYS+CG I AE+ F + + ++SWNA+I GF
Sbjct: 129 IHGFCLKIGFE--MMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 256 GKFEEAFDLLHEMQLMRSVE-PDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY--- 311
G +A D MQ E PD T+ +L+ C+ + ++ G+ +HG+ +R G+
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS--GFHCP 244
Query: 312 -DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI------------SGLFKE 358
+ SL+D Y K L A F+ I ++SW+S+I GLFK
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 359 MLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGD 418
+ L SQ L +I+ L GK + +KL T +N+++ MY+ CG
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 419 LVAA---FSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLV 475
+ A F+ +Q D W +VI ++G +++++ F M + N PD V +
Sbjct: 364 VDEAEKCFAEMQL----KDVISWTVVITGYGKHGLGKKSVRIFYEML-RHNIEPDEVCYL 418
Query: 476 NVISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC- 532
V+SAC + + EG+ L L++ G+ RV++ ++ + GR +K A + ++
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLET-HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Query: 533 YNCNLCTWNCMIS 545
N+ W ++S
Sbjct: 478 IKPNVGIWQTLLS 490
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 236/499 (47%), Gaps = 30/499 (6%)
Query: 6 HLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMV 65
+L TS L+ Y + +F ++VV+W+A+++ V N + L F EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 66 EEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLN 125
+GI + T + A +N L++G +H +K G + N V+MY+KCG +N
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 126 SSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSG--EQADNVSLSSAVAA 183
+E F + +SWN +++G +H Y K L F M + E+ D +L+S + A
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 184 SACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVV 243
+ G + GK IH ++ G+ ++T SL+ +Y +CG + +A +AF + K ++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 244 SWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGY 303
SW+++I G+A G+F EA L +Q + S + D + ++I + AD LLR+G+ +
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 304 AIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
A++ G + ++NS++D Y K + +AE F A + D++SW +I+G
Sbjct: 339 AVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF-AEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 355 ---LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMH 411
+F EML + LA+L +C+ ++ G+ + L+ T G+ +
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE------THGIKPRVE 451
Query: 412 MYINCGDLVAAFSLLQRISHNSDT-------SCWNIVIVACTQNGHFQEAIKTFKSMTQQ 464
Y DL+ L+ H DT W ++ C +G + + K + +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 511
Query: 465 QNASP-DSVTLVNVISACG 482
+P + V + N+ G
Sbjct: 512 DAKNPANYVMMSNLYGQAG 530
Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 172/365 (47%), Gaps = 24/365 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF + SL+ YS + +F ++ +++WNAMI V L F
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTF 196
Query: 62 GEMVEEGI--RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSS--LCNVFVNM 117
G M E I R D TL ++ A + + G+ +H +++G SS + V++
Sbjct: 197 GMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDL 256
Query: 118 YAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSL 177
Y KCG L S+ F + +SW++++ G + + F+ + Q D+ +L
Sbjct: 257 YVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFAL 316
Query: 178 SSAVAASACLGELSYGKVIHALGIKL--GYEDSPYVSVTNSLISMYSQCGDIEAAERAFW 235
SS + A L GK + AL +KL G E SV NS++ MY +CG ++ AE+ F
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLE----TSVLNSVVDMYLKCGLVDEAEKCFA 372
Query: 236 GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLR 295
M KDV+SW +I G+ +G +++ + +EM L ++EPD + ++S C+ S +++
Sbjct: 373 EMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIK 431
Query: 296 EGRSV-------HGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSW 348
EG + HG R + ++D ++ L +A+ L + + ++ W
Sbjct: 432 EGEELFSKLLETHGIKPR------VEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 349 NSMIS 353
+++S
Sbjct: 486 QTLLS 490
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 20/272 (7%)
Query: 2 GFLA----HLPTST----SLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRC 53
GFL H P+S SL+ Y Y S+ F + K +++W+++I +
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 54 VVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNV 113
V + F + E + DS L I+ L+QG+ + L++K ++S+ N
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 114 FVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQAD 173
V+MY KCG ++ +E F+ M D +SW +++G + +K + F EM + D
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 174 NV---SLSSAVAASACL--GELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIE 228
V ++ SA + S + GE + K++ GIK P V ++ + + G ++
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIK------PRVEHYACVVDLLGRAGRLK 467
Query: 229 AAERAFWGMTCKDVVS-WNAIIDGFALNGKFE 259
A+ M K V W ++ ++G E
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 20/188 (10%)
Query: 567 PNEI-SIVSILSACTQLGVLRHGKQIHGHVFHLGFQENSFISSALLDMYSNCKSN----- 620
PN+ ++VSIL CT+ G+ G Q+H ++ G N S+ L+DMY C+
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 621 ----------AAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGL 670
+WS+++S + +G ++ LF EM GI P + + + L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 671 VDEGLQYYNNMLE-EYDVRPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAM 729
+++GLQ + L+ +++ E + +VDM + G++ EA + + + + W AM
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGN--SLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAM 179
Query: 730 LSACSHHG 737
++ H G
Sbjct: 180 IAGFVHAG 187
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/432 (34%), Positives = 232/432 (53%), Gaps = 20/432 (4%)
Query: 355 LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
L++ ML S + IL SC S G+ +HC K G + AL+ MY
Sbjct: 40 LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 415 NCGDLVAAFSLLQRISHNSDTS-CWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
CG + A + + +S S C+N +I T N +A F+ M ++ S DSVT
Sbjct: 100 KCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KETGVSVDSVT 158
Query: 474 LVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCY 533
++ ++ C E + G+SLHG +K + + V N+ ITMY +C +++ +F+
Sbjct: 159 MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218
Query: 534 NCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQ 590
L TWN +IS +SQN LEL+ ++ P+ ++VS+LS+C LG + G +
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 591 IHGHVFHLGFQENSFISSALLDMYSNC---------------KSNAAWSSMISAYGYHGK 635
+ V GF N F+S+A + MY+ C KS +W++MI YG HG
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 636 GWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHV 695
G + LF +M GIRP + + +LSACSHSGL D+GL+ + M EY + P EH+
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 696 CIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAELLFKLEPE 755
C+VD+LGR+G+L EA EFI+++P++P VWGA+L AC H + M + + + EP
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN 458
Query: 756 NVGYYISLSNMY 767
N+GYY+ +SN+Y
Sbjct: 459 NIGYYVLMSNIY 470
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 205/464 (44%), Gaps = 25/464 (5%)
Query: 132 SGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELS 191
S + + WN + + + + + +R M SG D S + + A L
Sbjct: 11 SAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV 70
Query: 192 YGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFW--GMTCKDVVSWNAII 249
G+ +H K G E P+V +LISMY +CG + A + F + + V +NA+I
Sbjct: 71 SGQQLHCHVTKGGCETEPFV--LTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALI 128
Query: 250 DGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLL 309
G+ N K +A + M+ V D T++ L+ LC L GRS+HG ++ L
Sbjct: 129 SGYTANSKVTDAAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
Query: 310 GYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS-----GLFKEMLYLCS 364
++ ++NS + Y K S+ LF+ + P+ L++WN++IS GL ++L L
Sbjct: 188 DSEVAVLNSFITMYMKCGSVEAGRRLFDEM-PVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 365 QFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCG 417
Q S TL+++L SC + + G + GF N NA + MY CG
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 418 DLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNV 477
+L A ++ + S S W +I +G + + F M ++ PD V V
Sbjct: 307 NLAKARAVFDIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMI-KRGIRPDGAVFVMV 364
Query: 478 ISACGNLELAFEGKSLHGLALKSLMGLDTRVQN--ALITMYGRCRDIKSASTVFESC-YN 534
+SAC + L +G L A+K L+ ++ L+ + GR + A ES
Sbjct: 365 LSACSHSGLTDKGLELF-RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 535 CNLCTWNCMISAFSQNK-AEVRALELFRHLEFEPNEISIVSILS 577
+ W ++ A +K ++ L + +EFEPN I ++S
Sbjct: 424 PDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMS 467
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 8/346 (2%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKD--VVTWNAMITACVENRCVVMGLHFFGEMVEEG 68
T+L++ Y + +F E V +NA+I+ N V + F M E G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
+ DS T+L +V T L GR +H +K G+ ++ ++ N F+ MY KCG + +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F M ++WN ++SG N L + +M SG D +L S +++ A LG
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 189 ELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNAI 248
G + L G+ P V V+N+ ISMY++CG++ A F M K +VSW A+
Sbjct: 272 AKKIGHEVGKLVESNGF--VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 249 IDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR- 307
I + ++G E L +M + R + PD A V ++S C+ S L +G + A++R
Sbjct: 330 IGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKRE 387
Query: 308 -LLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMI 352
L + L+D ++ L +A ++ D W +++
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 207/467 (44%), Gaps = 32/467 (6%)
Query: 41 WNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSI 100
WN + + + M+ G D+ + I+ + ++ G+ +HC
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 101 KAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVS--WNTIMSGCLHNNYPEKC 158
K G + + ++MY KCG + + F + +S +N ++SG N+
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 159 LLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLI 218
FR M +G D+V++ V L G+ +H +K G + V+V NS I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE--VAVLNSFI 198
Query: 219 SMYSQCGDIEAAERAFWGMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRS--VEP 276
+MY +CG +EA R F M K +++WNA+I G++ NG A+D+L + M+S V P
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL---AYDVLELYEQMKSSGVCP 255
Query: 277 DIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSKAELLF 336
D T+V+++S CA + G V ++ + N+ + Y++ +L+KA +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 337 NAIAPMNDLVSWNSMIS------------GLFKEMLYLCSQFSFSTLLAILPSCN----S 380
+ I P+ LVSW +MI LF +M+ + + + +L +C+ +
Sbjct: 316 D-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLT 374
Query: 381 PESLEFGKSI-HCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQRISHNSDTSCWN 439
+ LE +++ ++L+ G + + L+ + G L A ++ + D + W
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYS----CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWG 430
Query: 440 IVIVACTQNGHFQEAIKTFKSMTQ-QQNASPDSVTLVNVISACGNLE 485
++ AC + + A F + + + N V + N+ S N E
Sbjct: 431 ALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQE 477
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 4/250 (1%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G + + S +T Y E+ LF E K ++TWNA+I+ +N L +
Sbjct: 186 GLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELY 245
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
+M G+ D TL+ ++S+ + K G V L G + + + N ++MYA+C
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCL-HNNYPEKCLLYFREMGWSGEQADNVSLSSA 180
G+L + F M VSW T M GC + E L+ F +M G + D
Sbjct: 306 GNLAKARAVFDIMPVKSLVSW-TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
++A + G G + +K Y+ P + L+ + + G ++ A M +
Sbjct: 365 LSACSHSGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVE 423
Query: 241 -DVVSWNAII 249
D W A++
Sbjct: 424 PDGAVWGALL 433
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 314/636 (49%), Gaps = 59/636 (9%)
Query: 190 LSYGKVIHALGIKLGY---EDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
L + IHAL + G +SPY + N+LISMY +CG +E A + F M ++VVS+N
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYAN--NNLISMYVRCGSLEQARKVFDKMPHRNVVSYN 167
Query: 247 AIIDGFALNGKFEE-AFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAI 305
A+ ++ N F AF L M V+P+ +T +L+ +CA + G S++ I
Sbjct: 168 ALYSAYSRNPDFASYAFPLTTHMAF-EYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII 226
Query: 306 RRLLGY--DLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG--------- 354
+ LGY ++++ S++ YS L A +F+ + D V+WN+MI G
Sbjct: 227 K--LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN-RDAVAWNTMIVGSLKNDKIED 283
Query: 355 ---LFKEMLYL---CSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNA 408
F+ ML +QF++S +L C+ S GK IH + + NA
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSI---VLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 409 LMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNAS 468
L+ MY +CGD+ AF + RI HN + WN +I C++NG ++A+ ++ + +
Sbjct: 341 LLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 469 PDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTV 528
PD T ISA E GK LHG K V L++MY + R+ +SA V
Sbjct: 400 PDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV 459
Query: 529 FESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFEPNE---ISIVSILSACTQLGVL 585
F+ ++ W MI S+ A++ F + E N S+ S++ AC+ + +L
Sbjct: 460 FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAML 519
Query: 586 RHGKQIHGHVFHLGFQENSFISSALLDMY-SNCKSNAA--------------WSSMISAY 630
R G+ H GF + AL+DMY N K A W+SM+ AY
Sbjct: 520 RQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAY 579
Query: 631 GYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDVRPE 690
HG +A+ F ++ +G P + +SLL+ACSH G +G ++ N ++E ++
Sbjct: 580 SQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAG 638
Query: 691 TEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPG-----VWGAMLSACSHHGDTKMGKQV 745
+H+ C+V+++ ++G + EA E I+ P PG +W +LSAC + + ++G
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSP----PGNNQAELWRTLLSACVNTRNLQIGLYA 694
Query: 746 AELLFKLEPENVGYYISLSNMYVALGRWKDAVEIGK 781
AE + KL+PE+ +I LSN+Y GRW+D E+ +
Sbjct: 695 AEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 265/572 (46%), Gaps = 53/572 (9%)
Query: 209 PYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVS---WNAIIDGFALNGKFEEAFDLL 265
PY + N+LISMY +C +E A + F M +++V+ +A+ + ++ L
Sbjct: 22 PYAN--NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL 79
Query: 266 HEMQLM--RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGY---DLLMMNSLM 320
Q++ + ++VV L C +L+ R +H + G N+L+
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 321 DFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCSQFSFSTLLA------- 373
Y + SL +A +F+ + P ++VS+N++ S + + F +T +A
Sbjct: 140 SMYVRCGSLEQARKVFDKM-PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPN 198
Query: 374 ------ILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFSLLQ 427
++ C E + G S++ +KLG+S+N + +++ MY +CGDL +A +
Sbjct: 199 SSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
Query: 428 RISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELA 487
+ +N D WN +IV +N ++ + F++M P T V++ C L
Sbjct: 259 CV-NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML-MSGVDPTQFTYSIVLNGCSKLGSY 316
Query: 488 FEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTWNCMISAF 547
GK +H + S D + NAL+ MY C D++ A VF +N NL +WN +IS
Sbjct: 317 SLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGC 376
Query: 548 SQNKAEVRALELFRHL----EFEPNEISIVSILSACTQLGVLRHGKQIHGHVFHLGFQEN 603
S+N +A+ ++R L P+E + + +SA + HGK +HG V LG++ +
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Query: 604 SFISSALLDMY-SNCKSNAA--------------WSSMISAYGYHGKGWEAIELFHEMCN 648
F+ + LL MY N ++ +A W+ MI + G A++ F EM
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 649 SGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEE-YDVRPETEHHVC--IVDMLGRSG 705
R S+ S++ ACS ++ +G ++ + +D VC +VDM G++G
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC----VMSVCGALVDMYGKNG 552
Query: 706 KLQEAYEFIKNLPIQPKPGVWGAMLSACSHHG 737
K + A E I +L P W +ML A S HG
Sbjct: 553 KYETA-ETIFSLASNPDLKCWNSMLGAYSQHG 583
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 150/527 (28%), Positives = 253/527 (48%), Gaps = 36/527 (6%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
G+ ++ TS+L YS+ ES+ +F N+D V WN MI ++N + GL FF
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M+ G+ T I+++ +++ G+++H I + +AD L N ++MY C
Sbjct: 289 RNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSC 348
Query: 122 GDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFRE-MGWSGEQADNVSLSSA 180
GD+ + F +H + VSWN+I+SGC N + E+ +L +R + S + D + S+A
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 181 VAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCK 240
++A+A +GK++H KLGYE S +V T L+SMY + + E+A++ F M +
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTT--LLSMYFKNREAESAQKVFDVMKER 466
Query: 241 DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSV 300
DVV W +I G + G E A EM ++ D ++ ++I C+D +LR+G
Sbjct: 467 DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVF 525
Query: 301 HGYAIRRLLGYDLLMM--NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMIS----- 353
H AIR G+D +M +L+D Y K+ AE +F ++A DL WNSM+
Sbjct: 526 HCLAIR--TGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSMLGAYSQH 582
Query: 354 GLFKEMLYLCSQF-------SFSTLLAILPSCNSPESLEFGKSIHCWQ------LKLGFS 400
G+ ++ L Q T L++L +C+ S GK + W +K GF
Sbjct: 583 GMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL--WNQMKEQGIKAGFK 640
Query: 401 NNTIGVNALMHMYINCGDLVAAFSLL-QRISHNSDTSCWNIVIVACTQNGHFQEAIKTFK 459
+ + VN + G + A L+ Q N+ W ++ AC + Q + +
Sbjct: 641 HYSCMVN----LVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAE 696
Query: 460 SMTQ-QQNASPDSVTLVNVISACGNLE-LAFEGKSLHGLALKSLMGL 504
+ + + + L N+ + G E +A + + GLA GL
Sbjct: 697 QILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGL 743
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 237/500 (47%), Gaps = 24/500 (4%)
Query: 10 STSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVV-MGLHFFGEMVEEG 68
+ +L++ Y E + +F + +++VV++NA+ +A N M E
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 69 IRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSE 128
++ +S+T +V + + G ++ IK G + + + MY+ CGDL S+
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 129 CTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLG 188
F ++ D V+WNT++ G L N+ E L++FR M SG + S + + LG
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 189 ELSYGKVIHA-LGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWNA 247
S GK+IHA + + D P + N+L+ MY CGD+ A F + ++VSWN+
Sbjct: 315 SYSLGKLIHARIIVSDSLADLP---LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 248 IIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
II G + NG E+A + + M + PD T IS A+ G+ +HG +
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTK- 430
Query: 308 LLGYD--LLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISG----------- 354
LGY+ + + +L+ Y K+ A+ +F+ + D+V W MI G
Sbjct: 431 -LGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKE-RDVVLWTEMIVGHSRLGNSELAV 488
Query: 355 -LFKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMY 413
F EM ++ +L +++ +C+ L G+ HC ++ GF AL+ MY
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMY 548
Query: 414 INCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVT 473
G A ++ ++ N D CWN ++ A +Q+G ++A+ F+ + + PD+VT
Sbjct: 549 GKNGKYETAETIFS-LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL-ENGFMPDAVT 606
Query: 474 LVNVISACGNLELAFEGKSL 493
+++++AC + +GK L
Sbjct: 607 YLSLLAACSHRGSTLQGKFL 626
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 205/744 (27%), Positives = 346/744 (46%), Gaps = 111/744 (14%)
Query: 64 MVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFV-----NMY 118
+ ++G + +T L ++ + + GR++H + G+ + +VFV +MY
Sbjct: 72 LFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEP---DVFVETKLLSMY 125
Query: 119 AKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLS 178
AKCG + + F M + +W+ ++ N + FR M G D+
Sbjct: 126 AKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFP 185
Query: 179 SAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMT 238
+ A G++ GKVIH++ IKLG S + V+NS++++Y++CG+++ A + F M
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGM--SSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 239 CKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGR 298
+DV++WN+++ + NGK EEA +L+ EM+ + P + T LI
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEME-KEGISPGLVTWNILIG------------ 290
Query: 299 SVHGYAIRRLLGYDLL-MMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGL-- 355
GY+ L ++ MD K + F A D+ +W +MISGL
Sbjct: 291 -----------GYNQLGKCDAAMDLMQKMET-------FGITA---DVFTWTAMISGLIH 329
Query: 356 ----------FKEMLYLCSQFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIG 405
F++M + T+++ + +C+ + + G +H +K+GF ++ +
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 406 VNALMHMYINCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQ 465
N+L+ MY CG L A + + N D WN +I Q G+ +A + F M Q
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITGYCQAGYCGKAYELFTRM-QDA 447
Query: 466 NASPDSVTLVNVISACGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSA 525
N P+ +T +IS G ++ EG+++ L M D +VQ
Sbjct: 448 NLRPNIITWNTMIS--GYIKNGDEGEAMD---LFQRMEKDGKVQR--------------- 487
Query: 526 STVFESCYNCNLCTWNCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQL 582
N TWN +I+ + QN + ALELFR ++F PN ++I+S+L AC L
Sbjct: 488 ----------NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 583 GVLRHGKQIHGHVFHLGFQENSFISSALLDMYSN---------------CKSNAAWSSMI 627
+ ++IHG V + +AL D Y+ K W+S+I
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLI 597
Query: 628 SAYGYHGKGWEAIELFHEMCNSGIRPTKSSVISLLSACSHSGLVDEGLQYYNNMLEEYDV 687
Y HG A+ LF++M GI P + ++ S++ A G VDEG + + ++ +Y +
Sbjct: 598 GGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHI 657
Query: 688 RPETEHHVCIVDMLGRSGKLQEAYEFIKNLPIQPKPGVWGAMLSACSHHGDTKMGKQVAE 747
P EH +V + GR+ +L+EA +FI+ + IQ + +W + L+ C HGD M AE
Sbjct: 658 IPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAE 717
Query: 748 LLFKLEPENVGYYISLSNMYVALG 771
LF LEPEN +S +Y ALG
Sbjct: 718 NLFSLEPENTATESIVSQIY-ALG 740
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 185/714 (25%), Positives = 312/714 (43%), Gaps = 106/714 (14%)
Query: 11 TSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITA-CVENRCVVMGLHFFGEMVEEGI 69
T LL+ Y+ + +F +++ TW+AMI A ENR + F M+++G+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA-KLFRLMMKDGV 177
Query: 70 RFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSEC 129
D I+ ++ G+V+H + IK GM + + N + +YAKCG+L+ +
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 130 TFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGE 189
F M D ++WN+++ N E+ + +EM G
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG-------------------- 277
Query: 190 LSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAA-----ERAFWGMTCKDVVS 244
SP + N LI Y+Q G +AA + +G+T DV +
Sbjct: 278 -----------------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITA-DVFT 319
Query: 245 WNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYA 304
W A+I G NG +A D+ +M + V P+ T+++ +S C+ ++ +G VH A
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKM-FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 305 IRRLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFKEMLYLCS 364
++ D+L+ NSL+D YSK L A +F+++ D+ +WNSMI+G + + Y
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITG-YCQAGYCGK 436
Query: 365 QFSFSTLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYINCGDLVAAFS 424
+ T + N I N ++ YI GD A
Sbjct: 437 AYELFTRMQ----------------------DANLRPNIITWNTMISGYIKNGDEGEAMD 474
Query: 425 LLQRISHNS----DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISA 480
L QR+ + +T+ WN++I QNG EA++ F+ M Q P+SVT+++++ A
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM-QFSRFMPNSVTILSLLPA 533
Query: 481 CGNLELAFEGKSLHGLALKSLMGLDTRVQNALITMYGRCRDIKSASTVFESCYNCNLCTW 540
C NL A + +HG L+ + V+NAL Y + DI+ + T+F ++ TW
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593
Query: 541 NCMISAFSQNKAEVRALELFRHLEFE---PNEISIVSILSACTQLGVLRHGKQIHGHVFH 597
N +I + + + AL LF ++ + PN ++ SI+ A +G + GK+ VF+
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK----VFY 649
Query: 598 LGFQENSFISSALLDMYSNCKSNAAWSSMISAYGYHGKGWEAIELFHEMCNSGIRPTKSS 657
+ I AL +C S+M+ YG + EA++ EM I+
Sbjct: 650 -SIANDYHIIPAL----EHC------SAMVYLYGRANRLEEALQFIQEM---NIQSETPI 695
Query: 658 VISLLSACSHSGLVDEGLQYYNNMLEEYDVRPETEHHVCIVDM-------LGRS 704
S L+ C G +D + N+ + + PE IV LGRS
Sbjct: 696 WESFLTGCRIHGDIDMAIHAAENL---FSLEPENTATESIVSQIYALGAKLGRS 746
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 210/482 (43%), Gaps = 71/482 (14%)
Query: 37 DVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVH 96
DV TW AMI+ + N L F +M G+ ++ T++ VSA + + + QG VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 97 CLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSGCLHNNYPE 156
+++K G I D + N V+MY+KCG L + F + D +WN++++G Y
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 157 KCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNS 216
K F M Q N+ P + N+
Sbjct: 436 KAYELFTRM-----QDANL--------------------------------RPNIITWNT 458
Query: 217 LISMYSQCGDIEAAERAFW-----GMTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLM 271
+IS Y + GD A F G ++ +WN II G+ NGK +EA +L +MQ
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 272 RSVEPDIATVVTLISLCADSLLLREGRSVHGYAIRRLLGYDLLMMNSLMDFYSKSNSLSK 331
R + P+ T+++L+ CA+ L + R +HG +RR L + N+L D Y+KS +
Sbjct: 519 RFM-PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEY 577
Query: 332 AELLFNAIAPMNDLVSWNSMISG------------LFKEMLYLCSQFSFSTLLAILPSCN 379
+ +F + D+++WNS+I G LF +M + TL +I+ +
Sbjct: 578 SRTIFLGME-TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636
Query: 380 SPESLEFGKSIHCWQLKLGFSNNTIGVNALMH------MYINCGDLVAAFSLLQRISHNS 433
+++ GK + +N+ + AL H +Y L A +Q ++ S
Sbjct: 637 LMGNVDEGKKVF-----YSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 434 DTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTLVNVISACGNLELAFEGKSL 493
+T W + C +G AI +++ + + + ++V+ I A G A G+SL
Sbjct: 692 ETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALG----AKLGRSL 747
Query: 494 HG 495
G
Sbjct: 748 EG 749
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 135/552 (24%), Positives = 234/552 (42%), Gaps = 96/552 (17%)
Query: 7 LPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFFGEMVE 66
L S S+L Y+ + + F +DV+ WN+++ A +N + EM +
Sbjct: 216 LRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 67 EGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKCGDLNS 126
EGI T I++ Q+ C+ +++ K
Sbjct: 276 EGISPGLVTWNILIGGYNQL----------------------GKCDAAMDLMQKMETFGI 313
Query: 127 SECTFSGMHCADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVSLSSAVAASAC 186
+ AD +W ++SG +HN + L FR+M +G + V++ SAV+A +C
Sbjct: 314 T---------ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 187 LGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWGMTCKDVVSWN 246
L ++ G +H++ +K+G+ D V V NSL+ MYS+CG +E A + F + KDV +WN
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDD--VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWN 422
Query: 247 AIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLLLREGRSVHGYAIR 306
++I G+ G +A++L MQ ++ P+I T T+IS GY
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDA-NLRPNIITWNTMIS---------------GYIKN 466
Query: 307 RLLGYDLLMMNSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNSMISGLFK-----EMLY 361
G MD + + K + + +WN +I+G + E L
Sbjct: 467 GDEG-------EAMDLFQRMEKDGKVQ---------RNTATWNLIIAGYIQNGKKDEALE 510
Query: 362 LCSQFSFS-------TLLAILPSCNSPESLEFGKSIHCWQLKLGFSNNTIGVNALMHMYI 414
L + FS T+L++LP+C + + + IH L+ NAL Y
Sbjct: 511 LFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 415 NCGDLVAAFSLLQRISHNSDTSCWNIVIVACTQNGHFQEAIKTFKSMTQQQNASPDSVTL 474
GD+ + ++ + D WN +I +G + A+ F M + Q +P+ TL
Sbjct: 571 KSGDIEYSRTIFLGM-ETKDIITWNSLIGGYVLHGSYGPALALFNQM-KTQGITPNRGTL 628
Query: 475 VNVISACGNLELAFEGKSL---------------HGLALKSLMGLDTRVQNALITMYGRC 519
++I A G + EGK + H A+ L G R++ AL + +
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEAL--QFIQE 686
Query: 520 RDIKSASTVFES 531
+I+S + ++ES
Sbjct: 687 MNIQSETPIWES 698
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 157/364 (43%), Gaps = 54/364 (14%)
Query: 2 GFLAHLPTSTSLLTAYSNVSYFESSLALFYETCNKDVVTWNAMITACVENRCVVMGLHFF 61
GF+ + SL+ YS E + +F NKDV TWN+MIT + F
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 62 GEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRVVHCLSIKAGMIADSSLCNVFVNMYAKC 121
M + +R + T N ++ Y K
Sbjct: 442 TRMQDANLRPNIITW-----------------------------------NTMISGYIKN 466
Query: 122 GDLNSSECTFSGMHC-----ADTVSWNTIMSGCLHNNYPEKCLLYFREMGWSGEQADNVS 176
GD + F M +T +WN I++G + N ++ L FR+M +S ++V+
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 177 LSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSVTNSLISMYSQCGDIEAAERAFWG 236
+ S + A A L + IH G L +V N+L Y++ GDIE + F G
Sbjct: 527 ILSLLPACANLLGAKMVREIH--GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 237 MTCKDVVSWNAIIDGFALNGKFEEAFDLLHEMQLMRSVEPDIATVVTLISLCADSLL--L 294
M KD+++WN++I G+ L+G + A L ++M+ + + P+ T+ ++I A L+ +
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMK-TQGITPNRGTLSSII--LAHGLMGNV 641
Query: 295 REGRSVHGYAIRRLLGYDLLMM----NSLMDFYSKSNSLSKAELLFNAIAPMNDLVSWNS 350
EG+ V Y+I Y ++ ++++ Y ++N L +A + ++ W S
Sbjct: 642 DEGKKVF-YSIAN--DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWES 698
Query: 351 MISG 354
++G
Sbjct: 699 FLTG 702
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 8/275 (2%)
Query: 35 NKDVVTWNAMITACVENRCVVMGLHFFGEMVEEGIRFDSTTLLIIVSALTQMNCLKQGRV 94
++ TWN +I ++N L F +M +S T+L ++ A + K R
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 95 VHCLSIKAGMIADSSLCNVFVNMYAKCGDLNSSECTFSGMHCADTVSWNTIMSG-CLHNN 153
+H ++ + A ++ N + YAK GD+ S F GM D ++WN+++ G LH +
Sbjct: 546 IHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGS 605
Query: 154 YPEKCLLYFREMGWSGEQADNVSLSSAVAASACLGELSYGKVIHALGIKLGYEDSPYVSV 213
Y L F +M G + +LSS + A +G + GK + I Y P +
Sbjct: 606 YG-PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF-YSIANDYHIIPALEH 663
Query: 214 TNSLISMYSQCGDIEAAERAFWGMTCK-DVVSWNAIIDGFALNGKFEEAFDLLHEMQLMR 272
++++ +Y + +E A + M + + W + + G ++G + A +H + +
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMA---IHAAENLF 720
Query: 273 SVEPDIATVVTLISLCADSLLLREGRSVHGYAIRR 307
S+EP+ +++S +L + GRS+ G RR
Sbjct: 721 SLEPENTATESIVSQIY-ALGAKLGRSLEGNKPRR 754
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 273,268,039
Number of Sequences: 539616
Number of extensions: 10784734
Number of successful extensions: 35444
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 24990
Number of HSP's gapped (non-prelim): 2729
length of query: 781
length of database: 191,569,459
effective HSP length: 126
effective length of query: 655
effective length of database: 123,577,843
effective search space: 80943487165
effective search space used: 80943487165
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)