Query 035829
Match_columns 436
No_of_seqs 153 out of 1196
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 11:14:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035829.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035829hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 7.5E-78 2.6E-82 610.7 40.3 392 1-418 16-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 4.1E-78 1.4E-82 609.4 35.8 401 1-431 13-420 (421)
3 2xr7_A Malonyltransferase; xen 100.0 5.9E-72 2E-76 570.1 33.9 404 1-425 10-449 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.9E-70 1E-74 557.6 38.6 399 1-425 15-449 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 4.8E-66 1.6E-70 526.4 32.3 396 14-428 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.9 1.8E-07 6E-12 93.0 23.9 276 12-331 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.4 5.4E-05 1.9E-09 77.3 24.7 271 12-331 95-401 (520)
8 4hvm_A Tlmii; PSI-biology, mid 98.4 8.3E-06 2.8E-10 82.9 17.9 277 12-332 12-329 (493)
9 1l5a_A Amide synthase, VIBH; n 98.3 1.8E-05 6E-10 78.9 17.6 244 46-332 34-306 (436)
10 2xhg_A Tyrocidine synthetase A 98.3 0.00011 3.8E-09 73.7 23.0 280 12-332 16-337 (466)
11 2vsq_A Surfactin synthetase su 97.8 0.0006 2.1E-08 77.5 19.2 276 12-331 11-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.0015 5E-08 66.6 16.9 183 137-331 177-400 (519)
13 3cla_A Type III chloramphenico 74.2 2.1 7.2E-05 37.8 3.4 44 123-166 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 72.8 2.4 8.2E-05 37.6 3.4 43 123-165 172-216 (217)
15 1q23_A Chloramphenicol acetylt 72.6 2.4 8.3E-05 37.6 3.4 44 123-166 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.1 3 0.0001 37.5 3.5 29 138-166 204-232 (239)
17 3rqc_A Probable lipoamide acyl 69.0 2.7 9.4E-05 37.4 2.9 30 138-167 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 68.8 3.3 0.00011 37.1 3.4 30 138-167 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 68.7 3.3 0.00011 37.3 3.4 29 138-166 208-236 (243)
20 2ii3_A Lipoamide acyltransfera 67.4 3.6 0.00012 37.6 3.4 29 138-166 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 62.3 5.1 0.00018 36.4 3.4 30 138-167 210-239 (256)
22 3l60_A Branched-chain alpha-ke 61.0 5.6 0.00019 35.9 3.4 30 138-167 205-234 (250)
23 2xl1_A Arginine attenuator pep 52.2 10 0.00036 20.1 2.1 20 240-259 5-24 (26)
24 3dva_I Dihydrolipoyllysine-res 41.9 5.4 0.00018 39.2 0.0 29 138-166 391-419 (428)
25 2k1o_A Putative; repressor, tr 41.1 64 0.0022 21.5 5.0 45 207-265 13-57 (66)
26 1x93_A Hypothetical protein HP 39.2 62 0.0021 20.8 4.6 23 210-232 2-24 (55)
27 4hhu_A OR280; engineered prote 21.9 1E+02 0.0035 23.9 4.1 39 23-69 78-116 (170)
28 2xt6_A 2-oxoglutarate decarbox 21.0 53 0.0018 36.3 3.3 30 138-167 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=7.5e-78 Score=610.66 Aligned_cols=392 Identities=22% Similarity=0.340 Sum_probs=326.7
Q ss_pred CCCCCCCCCCCCcccCCccccccccccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhccccccccc----CCceEEe
Q 035829 1 NQTSSPTPKHLRTYKLSLPDQLCSKLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI----DSFSVDC 76 (436)
Q Consensus 1 v~Ps~ptp~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~----~~~~i~~ 76 (436)
|+|+.|||+ +.++||.||+.+++.|++.+|||+.+.. +....+++||+||+++|++||||||||+ |+++|+|
T Consensus 16 V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c 91 (439)
T 4g22_A 16 VRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS--SNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIEC 91 (439)
T ss_dssp ECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC--TTTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEEC
T ss_pred EeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC--ccccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEE
Confidence 789999986 5699999999988999999999997543 2235689999999999999999999997 5799999
Q ss_pred CCCCeEEEEEEeeccCccccCCCCChhHhhccCCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeeceeccchhhHHH
Q 035829 77 NDHGAAFTGAAIVGCDISKFLQPPDMELLLQLIPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFN 156 (436)
Q Consensus 77 ~~~gv~f~~a~~~~~~~~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~ 156 (436)
|++||.|++|++ +++++|+........+++|+|..+. .....+.|++.+|||+|+|||++||+++||.++||.|+.+
T Consensus 92 ~~~Gv~fv~A~~-d~~l~~l~~~~p~~~~~~l~p~~~~--~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~ 168 (439)
T 4g22_A 92 NGEGVLFVEAES-DGVVDDFGDFAPTLELRRLIPAVDY--SQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLH 168 (439)
T ss_dssp CCCCEEEEEEEE-SSCGGGGTTCCCCGGGGGGSCCCCT--TSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHH
T ss_pred CCCCCEEEEEEc-CCcHHHhcCCCCCHHHHhcCCCCCc--ccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHH
Confidence 999999999999 9999999653222356788886543 1113567999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccCCCcccCcccCCCCCCCCC-CCC-----CCC---C-----CCC-CCeEEEEEEeCHHHH
Q 035829 157 FMKTSGEITRGVINDNDNIFNNNVVLDCTSLFPPVNFPKP-YQI-----VTS---P-----QSS-GNIVFKRLLFDSKKI 221 (436)
Q Consensus 157 fl~~wa~~~rg~~~~~~~~~~~~P~~dr~~l~~~~~~p~~-~~~-----~~~---~-----~~~-~~~~~~~f~f~~~~l 221 (436)
|+++||++|||.. .+ .+|++||+.+.+ ++.|.. +.. .+. . ... .++..++|+|++++|
T Consensus 169 Fl~~wa~~~rg~~----~~--~~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i 241 (439)
T 4g22_A 169 FINSWSDMARGLD----VT--LPPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQI 241 (439)
T ss_dssp HHHHHHHHHTTCC----CS--SCCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHH
T ss_pred HHHHHHHHhCCCC----CC--CCCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHH
Confidence 9999999999975 34 689999986642 333321 111 000 0 112 578999999999999
Q ss_pred HHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCCCCCCCcccceee
Q 035829 222 AALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRCRGNIFW 301 (436)
Q Consensus 222 ~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~ 301 (436)
++||+++.++.. ..++|++|+|+||+|+|++|||+..++ +.+.+.++||+|+|++||+|++||||++.
T Consensus 242 ~~LK~~a~~~~~------~~~~St~dal~A~iWr~~~rAr~~~~~------~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~ 309 (439)
T 4g22_A 242 SALKAKSKEDGN------TISYSSYEMLAGHVWRCACKARGLEVD------QGTKLYIATDGRARLRPSLPPGYFGNVIF 309 (439)
T ss_dssp HHHHHGGGGGGC------CCCCCHHHHHHHHHHHHHHHHTTCCTT------CEEEEEEEEECTTTSSSCCCTTBCSCCEE
T ss_pred HHHHHHhhccCC------CCCccHHHHHHHHHHHHHHHhcCCCCC------CcEEEEEEEcccCCCCCCCCCCcccceee
Confidence 999999986542 467999999999999999999987554 78999999999999999999999999999
Q ss_pred eeecccccccccchhHHHHHHHHHHHHHhcc-ccccchh-hhhhhhhhhc-----ccCCCCeEEEeccCCCCCcccccCC
Q 035829 302 FARAEWSLAENDAIKVASLVREVIKAKRMGG-EVMHSNE-HLGFIKDMEE-----TWEDSRSFVLTSVVGLPCYEVDFGW 374 (436)
Q Consensus 302 ~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~-~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~ssw~~~~~~~~DFG~ 374 (436)
.+.+.++++||.+.+|+++|.+||+++++++ +|+++.+ |++..++... ...+...+++|||.+|++|++||||
T Consensus 310 ~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGw 389 (439)
T 4g22_A 310 TATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGW 389 (439)
T ss_dssp EECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSS
T ss_pred hhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCC
Confidence 9999999999999999999999999999999 9999987 7654433211 1112335999999999999999999
Q ss_pred CceeeeeecccccccEEEEeeCCCC-CcEEEEEecCHHHHHhhhc
Q 035829 375 GKPVWFSVGPFLLLDFAILSSSSDG-EGIEAWVVMFKEDMDKYEQ 418 (436)
Q Consensus 375 G~P~~~~~~~~~~~g~~~i~p~~~~-~g~ev~v~L~~e~m~~l~~ 418 (436)
|||+++++...+.+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 390 GkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 390 GRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 9999999877677899999999754 4899999999999999987
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=4.1e-78 Score=609.41 Aligned_cols=401 Identities=30% Similarity=0.459 Sum_probs=335.9
Q ss_pred CCCCCCCCCCCCcccCCccccccccccceEEEEEeCCCCC-cchhhhHHHHHHHHHHhhhhcccccccccCCceEEeCCC
Q 035829 1 NQTSSPTPKHLRTYKLSLPDQLCSKLYVSLVFFYSTNCKQ-QDLRKKSDLLKQSLAKSLTHYYPFAGRLIDSFSVDCNDH 79 (436)
Q Consensus 1 v~Ps~ptp~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~-~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~ 79 (436)
|+|+.|||++.+.++||.||+.+++.|++.+|||+.++.. .+....+++||+||+++|++||+|||||+++++|+|+++
T Consensus 13 V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~ 92 (421)
T 2bgh_A 13 ILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDS 92 (421)
T ss_dssp EECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEETTTEEECCCC
T ss_pred EeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCCCcEEEEcCC
Confidence 7899999987678999999998888999999999976431 134578999999999999999999999998899999999
Q ss_pred CeEEEEEEeeccCccccCCC-CChhHhhccCCCCCCCC-CCcccCCceeEEEEeeeccCeEEEeeeeceeccchhhHHHH
Q 035829 80 GAAFTGAAIVGCDISKFLQP-PDMELLLQLIPPSPQLS-NLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFNF 157 (436)
Q Consensus 80 gv~f~~a~~~~~~~~dl~~~-p~~~~~~~l~P~~~~~~-~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~f 157 (436)
||.|++|++ +++++|+... |....++.|+|...... +....+.|++.+|||+|+|||++||+++||.++||.|+.+|
T Consensus 93 Gv~fv~A~~-d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~f 171 (421)
T 2bgh_A 93 GVPFVEARV-QAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATF 171 (421)
T ss_dssp CEEEEEEEE-SSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHH
T ss_pred ceEEEEEEE-cCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHH
Confidence 999999999 9999998764 66556778888662100 11134579999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCccCCCcccC-cccCCC-CCCCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhccCC
Q 035829 158 MKTSGEITRGVINDNDNIFNNNVVLDC-TSLFPP-VNFPKPYQIVTSPQSSGNIVFKRLLFDSKKIAALKEKMNKELMGN 235 (436)
Q Consensus 158 l~~wa~~~rg~~~~~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~ 235 (436)
+++||++|||.. . . ..|.+|| +.+.++ ++.|. +.+....++..++|+|++++|++||+++.++..
T Consensus 172 l~~wa~~~rg~~---~-~--~~P~~dr~~~l~p~~~~~~~-----~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~-- 238 (421)
T 2bgh_A 172 LNAWTATCRGET---E-I--VLPNFDLAARHFPPVDNTPS-----PELVPDENVVMKRFVFDKEKIGALRAQASSASE-- 238 (421)
T ss_dssp HHHHHHHHTTCS---C-C--CCCBCSHHHHHSCCCTTCCC-----CCCCCCSSEEEEEEEECHHHHHHHHHHTC------
T ss_pred HHHHHHHhcCCC---C-C--CCCccccccccCCCcccCCC-----CccCCccceEEEEEEECHHHHHHHHHHhhccCC--
Confidence 999999999975 2 2 5788999 777765 55443 122234678999999999999999999976431
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCCCCCCCcccceeeeeecccccccccch
Q 035829 236 NFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRCRGNIFWFARAEWSLAENDAI 315 (436)
Q Consensus 236 ~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~ 315 (436)
..++|++|+|+||+|+|++|||+...+ .++++.+.++||+|+|++||+|++||||++..+.+.+++++ +.
T Consensus 239 ----~~~~St~d~l~A~iW~~~~~Ar~~~~~----~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~~ 308 (421)
T 2bgh_A 239 ----EKNFSRVQLVVAYIWKHVIDVTRAKYG----AKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--DK 308 (421)
T ss_dssp -----CCCCHHHHHHHHHHHHHHHHHHHHSC----CCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--CC
T ss_pred ----CCCCchhHhHHHHHHHHHHHHhcccCC----CCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc--cc
Confidence 367999999999999999999975322 23689999999999999999999999999999998888875 78
Q ss_pred hHHHHHHHHHHHHHhcc-ccccchh-hhhhhhhhhcccCCCCeEEEeccCCCCCcccccCCCceeeeeecccccccEEEE
Q 035829 316 KVASLVREVIKAKRMGG-EVMHSNE-HLGFIKDMEETWEDSRSFVLTSVVGLPCYEVDFGWGKPVWFSVGPFLLLDFAIL 393 (436)
Q Consensus 316 ~l~~~A~~ir~ai~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~g~~~i 393 (436)
+|+++|.+||+++++++ ++++... +.+. +.. ....+.+++|||.++++|++|||||||.++++...+.+|++++
T Consensus 309 ~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~ 384 (421)
T 2bgh_A 309 DFPDLIGPLRTSLEKTEDDHNHELLKGMTC---LYE-LEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALL 384 (421)
T ss_dssp CGGGGHHHHHHHTCCCSSCHHHHHHHHHHH---HHT-SCGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhc-cCCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEE
Confidence 99999999999999999 8888644 3221 111 1123469999999999999999999999999887667899999
Q ss_pred eeCCCCCcEEEEEecCHHHHHhhhcChhhhhhccCCCC
Q 035829 394 SSSSDGEGIEAWVVMFKEDMDKYEQEPSIKAYASSNPS 431 (436)
Q Consensus 394 ~p~~~~~g~ev~v~L~~e~m~~l~~d~~~~~~~~~~~~ 431 (436)
+|+++++|++|.|+|++++|++|++ ||.+|++.||+
T Consensus 385 ~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 385 MDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp EECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred EecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 9999888999999999999999998 99999999986
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.9e-72 Score=570.08 Aligned_cols=404 Identities=19% Similarity=0.223 Sum_probs=319.2
Q ss_pred CCCCCCCCCCCCcccCCcccccc-ccccceEEEEEeCCCCCcc-hhhhHHHHHHHHHHhhhhccccccccc------CCc
Q 035829 1 NQTSSPTPKHLRTYKLSLPDQLC-SKLYVSLVFFYSTNCKQQD-LRKKSDLLKQSLAKSLTHYYPFAGRLI------DSF 72 (436)
Q Consensus 1 v~Ps~ptp~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~-~~~~~~~L~~sL~~~L~~~p~LaGrl~------~~~ 72 (436)
|+|+.||+++ +.++||.||+.. ...|++.+|||+.+....+ .+..+++||+||+++|++||+|||||+ |++
T Consensus 10 V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~ 88 (453)
T 2xr7_A 10 VVPSPGSATE-LTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYP 88 (453)
T ss_dssp CCCCTTCCSE-EEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCC
T ss_pred ecCCCCCCCC-ceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCE
Confidence 7999875543 789999999974 4469999999997643211 346799999999999999999999994 479
Q ss_pred eEEeC-CCCeEEEEEEeeccCccccCCC--CChhHhhccCCCCCCCCCC--cccCCceeEEEEeeeccCeEEEeeeecee
Q 035829 73 SVDCN-DHGAAFTGAAIVGCDISKFLQP--PDMELLLQLIPPSPQLSNL--DISERELLAVQVNLFSGGEMAIGVCFSHG 147 (436)
Q Consensus 73 ~i~~~-~~gv~f~~a~~~~~~~~dl~~~--p~~~~~~~l~P~~~~~~~~--~~~~~P~l~vQvt~~~cgG~~L~~~~~H~ 147 (436)
+|+|+ ++||.|++|++ +.+++++... +....++.|+|..+. .+. ...+.|++.+|||+|+|||++||+++||+
T Consensus 89 ~i~c~~~~gv~fv~A~~-~~~l~~l~~~~~~~~~~~~~l~p~~~~-~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~ 166 (453)
T 2xr7_A 89 ELRYVTGNSVSVIFSES-DMDFNYLIGYHPRNTKDFYHFVPQLAE-PKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHV 166 (453)
T ss_dssp EEEEETTCCCEEEEEEC-CSCHHHHTCSSCCCGGGGGGGSCCCCC-CEEETTEEECCCEEEEEEEETTTEEEEEEEECTT
T ss_pred EEEecCCCceEEEEEec-CCCHHHhhccCCCChhhhhcCCCCCCC-cccccccccCCeEEEEEEEccCCcEEEEEeeeee
Confidence 99999 59999999999 8999998652 234566788887542 110 01227999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHhc-CCCC-CCCCCccCCCcccCcccCCCCCCCCC-CCCC---CC--C----CCCCCeEEEEEE
Q 035829 148 VADGSAIFNFMKTSGEITR-GVIN-DNDNIFNNNVVLDCTSLFPPVNFPKP-YQIV---TS--P----QSSGNIVFKRLL 215 (436)
Q Consensus 148 v~Dg~g~~~fl~~wa~~~r-g~~~-~~~~~~~~~P~~dr~~l~~~~~~p~~-~~~~---~~--~----~~~~~~~~~~f~ 215 (436)
++||.|+.+|+++||++|| |... ..... ..|++||+.+.++..++.. +..+ +. . ....++..++|+
T Consensus 167 v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~--~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 244 (453)
T 2xr7_A 167 AGDGATIVKFVRAWALLNKFGGDEQFLANE--FIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTFI 244 (453)
T ss_dssp TCCSHHHHHHHHHHHHHHHTTTCGGGSCGG--GSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEEEE
T ss_pred eechhHHHHHHHHHHHHhhcCCCcccCCCC--CCCccccccccCCCCcchHHHHhccccCCccccccccCCCCceEEEEE
Confidence 9999999999999999999 7621 00123 5689999887644321100 1100 11 0 123467789999
Q ss_pred eCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhccc--c-cccccccceeEEEEEeccccccCCCCC
Q 035829 216 FDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGER--K-REIHNKLYSHAMYYTMNVRNKTNPPMI 292 (436)
Q Consensus 216 f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~--~-~~~~~~~~~~~l~~~vd~R~rl~pplp 292 (436)
|++++|++||+++.++.. ...++|++|+|+||+|+|++|||... . + .++.+.+.++||+|+|++||+|
T Consensus 245 f~~~~i~~Lk~~a~~~~~-----~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~----~~~~~~l~~~vd~R~rl~pplP 315 (453)
T 2xr7_A 245 ITRHDIGKLKNLVLTRRP-----KLTHVTSFTVTCAYVWTCIIKSEAATGEEID----ENGMEFFGCAADCRAQFNPPLP 315 (453)
T ss_dssp ECHHHHHHHHHHHHHHSC-----CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCC----TTSEEEEEEECCTTSCSSSCCC
T ss_pred ECHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHHHHhccccccCC----CCcceEEEEEecccccCCCCCC
Confidence 999999999999987542 12579999999999999999999752 0 1 2378999999999999999999
Q ss_pred CCcccceeeeeeccccccccc-chhHHHHHHHHHHHHHh--cc-c-cccchhhhhhhhhhhcccCCCCeEEEeccCCCCC
Q 035829 293 PRCRGNIFWFARAEWSLAEND-AIKVASLVREVIKAKRM--GG-E-VMHSNEHLGFIKDMEETWEDSRSFVLTSVVGLPC 367 (436)
Q Consensus 293 ~~Y~GN~~~~~~~~~~~~~l~-~~~l~~~A~~ir~ai~~--~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~ 367 (436)
++||||++..+.+.++++||. +.+|+++|..||+++++ ++ + ++++ .|++..+ ... +...+++|||++|++
T Consensus 316 ~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~-~~~~~~~---~~~-~~~~~~vssw~~~~~ 390 (453)
T 2xr7_A 316 PSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG-SWFKEYD---KVD-AKRSLSVAGSPKLDL 390 (453)
T ss_dssp TTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS-CTTSCCC---CSC-GGGEEEECSCSSCCG
T ss_pred cccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh-HHHHHHH---hhc-cCCcEEEeccccCCc
Confidence 999999999999999999998 48999999999999999 56 7 8887 4333221 111 223699999999999
Q ss_pred cccccCCCceeeeeeccccccc--EEEEeeCCCCC-cEEEEEecCHHHHHhhhcChhhhhh
Q 035829 368 YEVDFGWGKPVWFSVGPFLLLD--FAILSSSSDGE-GIEAWVVMFKEDMDKYEQEPSIKAY 425 (436)
Q Consensus 368 ~~~DFG~G~P~~~~~~~~~~~g--~~~i~p~~~~~-g~ev~v~L~~e~m~~l~~d~~~~~~ 425 (436)
|++|||||+|.++++...+.+| +++++|+++++ |++|.|+|++++|++|++ +|.+.
T Consensus 391 y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~~ 449 (453)
T 2xr7_A 391 YAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTHG 449 (453)
T ss_dssp GGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHHH
T ss_pred cccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHHH
Confidence 9999999999999987766778 88899987654 799999999999999965 66553
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.9e-70 Score=557.59 Aligned_cols=399 Identities=20% Similarity=0.266 Sum_probs=313.0
Q ss_pred CCCCCCCCCCCCcccCCcccccc-ccccceEEEEEeCCCCCcc-hhhhHHHHHHHHHHhhhhccccccccc--C----Cc
Q 035829 1 NQTSSPTPKHLRTYKLSLPDQLC-SKLYVSLVFFYSTNCKQQD-LRKKSDLLKQSLAKSLTHYYPFAGRLI--D----SF 72 (436)
Q Consensus 1 v~Ps~ptp~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~-~~~~~~~L~~sL~~~L~~~p~LaGrl~--~----~~ 72 (436)
|+|+.||+++ +.++||.||+.. ...|++.+|||+.++...+ .+..+++||+||+++|++||+|||||+ . ++
T Consensus 15 V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~ 93 (454)
T 2e1v_A 15 VSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKP 93 (454)
T ss_dssp ECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSSSCC
T ss_pred EeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCCCCE
Confidence 6899875543 789999999974 4569999999997643101 345799999999999999999999997 2 69
Q ss_pred eEEeC-CCCeEEEEEEeeccCccccCCC-C-ChhHhhccCCCCCCCCC-CcccCCceeEEEEeeeccCeEEEeeeeceec
Q 035829 73 SVDCN-DHGAAFTGAAIVGCDISKFLQP-P-DMELLLQLIPPSPQLSN-LDISERELLAVQVNLFSGGEMAIGVCFSHGV 148 (436)
Q Consensus 73 ~i~~~-~~gv~f~~a~~~~~~~~dl~~~-p-~~~~~~~l~P~~~~~~~-~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v 148 (436)
+|+|+ ++||.|++|++ +.+++++... + ....++.|+|..+...+ ....+.|++.+|||+|+|||++||+++||.+
T Consensus 94 ~i~c~~~~gv~fv~A~~-~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v 172 (454)
T 2e1v_A 94 EICYVEGDSVAVTFAEC-NLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCL 172 (454)
T ss_dssp EEEECTTCCEEEEEEEE-CSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGG
T ss_pred EEEECCCCcEEEEEEEe-CCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeee
Confidence 99999 59999999999 8999999653 2 33456788887642100 0113459999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhc-CCC-CC-CCCCccCCCcccCcccCCCCCCCC----CCCC-C------CCC-CCCCCeEEEE
Q 035829 149 ADGSAIFNFMKTSGEITR-GVI-ND-NDNIFNNNVVLDCTSLFPPVNFPK----PYQI-V------TSP-QSSGNIVFKR 213 (436)
Q Consensus 149 ~Dg~g~~~fl~~wa~~~r-g~~-~~-~~~~~~~~P~~dr~~l~~~~~~p~----~~~~-~------~~~-~~~~~~~~~~ 213 (436)
+||.|+.+|+++||++|| |.. .. ..+. ..|.+|| .+..+. +.. .+.. . +.. ....++..++
T Consensus 173 ~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~--~~P~~dr-~l~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (454)
T 2e1v_A 173 GDASTRFCFLKAWTSIARSGNNDESFLANG--TRPLYDR-IIKYPM-LDEAYLKRAKVESFNEDYVTQSLAGPSDKLRAT 248 (454)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCHHHHHHS--CCCBCCC-CCCCHH-HHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEE
T ss_pred cchhHHHHHHHHHHHHhccCCCccccCCCC--CCCcccc-cCCCCC-cchHHHHhhhccccccccCcccCCCCCCceEEE
Confidence 999999999999999999 752 00 0113 5789999 653211 000 0100 0 011 1235678999
Q ss_pred EEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCCCCCC
Q 035829 214 LLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIP 293 (436)
Q Consensus 214 f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~ 293 (436)
|+|++++|++||+++.++.. ...++|++|+|+||+|+|++||| ++ +.+.+.++||+|+|++||+|+
T Consensus 249 f~f~~~~i~~LK~~a~~~~~-----~~~~~St~d~l~A~lWr~~~~Ar---~~------~~~~l~~~vd~R~rl~pplP~ 314 (454)
T 2e1v_A 249 FILTRAVINQLKDRVLAQLP-----TLEYVSSFTVACAYIWSCIAKSR---ND------KLQLFGFPIDRRARMKPPIPT 314 (454)
T ss_dssp EEECHHHHHHHHHHHHHHCT-----TCSCCCHHHHHHHHHHHHHHHHH---CC------SEEEEEEEEECGGGSSSCCCT
T ss_pred EEECHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHhhhc---CC------CceEEEEEecchhccCCCCCc
Confidence 99999999999999986542 12579999999999999999999 44 689999999999999999999
Q ss_pred Ccccceeeeeecccccccccc-hhHHHHHHHHHHHHHhcc-----ccccc-hh-hhhhhhhhhcccCCCCeEEEeccCCC
Q 035829 294 RCRGNIFWFARAEWSLAENDA-IKVASLVREVIKAKRMGG-----EVMHS-NE-HLGFIKDMEETWEDSRSFVLTSVVGL 365 (436)
Q Consensus 294 ~Y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~ai~~~~-----~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ssw~~~ 365 (436)
+||||++..+.+.++++||.+ .+|+++|.+||+++++++ +++++ .. |.+.. .... +...+.+|||++|
T Consensus 315 ~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~vssw~~~ 390 (454)
T 2e1v_A 315 AYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLV---SEGM-PTTMTWVSGTPKL 390 (454)
T ss_dssp TBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHH---HHCC-CSEEEEEECCTTS
T ss_pred ccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH---Hhhc-CCceEEEecCCCC
Confidence 999999999999999999984 899999999999999995 44554 33 33321 1112 2236999999999
Q ss_pred CCcccccCCCceeeeeecccccccEEEEeeCCCCC-cEEEEEecCHHHHHhhhcChhhhhh
Q 035829 366 PCYEVDFGWGKPVWFSVGPFLLLDFAILSSSSDGE-GIEAWVVMFKEDMDKYEQEPSIKAY 425 (436)
Q Consensus 366 ~~~~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~-g~ev~v~L~~e~m~~l~~d~~~~~~ 425 (436)
++|++|||||||.++++...+.+|+++++|+++++ |++|.|+|++++|++|++ +|.+.
T Consensus 391 ~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~~ 449 (454)
T 2e1v_A 391 RFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDDG 449 (454)
T ss_dssp CGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHHH
T ss_pred CcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHHH
Confidence 99999999999999998776678999999988754 799999999999999965 66553
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=4.8e-66 Score=526.41 Aligned_cols=396 Identities=14% Similarity=0.115 Sum_probs=304.2
Q ss_pred ccCCcccccc--ccccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhccccccccc---------CCceEEeCCCCeE
Q 035829 14 YKLSLPDQLC--SKLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI---------DSFSVDCNDHGAA 82 (436)
Q Consensus 14 ~~Ls~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---------~~~~i~~~~~gv~ 82 (436)
++||.|||+. ++.|++.+|||+.++.. +.+..+++||+||+++|++||||||||+ |+++|+|++.++.
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~-~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS-QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG-GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 6899999987 68999999999964321 3456899999999999999999999986 2578888777777
Q ss_pred EEEEEeecc-----CccccCC--CCChhHh--hccCCCCCCC---CCCcccCCceeEEEEeeeccCeEEEeeeeceeccc
Q 035829 83 FTGAAIVGC-----DISKFLQ--PPDMELL--LQLIPPSPQL---SNLDISERELLAVQVNLFSGGEMAIGVCFSHGVAD 150 (436)
Q Consensus 83 f~~a~~~~~-----~~~dl~~--~p~~~~~--~~l~P~~~~~---~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~D 150 (436)
|+++++ +. ++++|.. .|. ..+ ..|.|..... .+....+.|++.+|||+| |||++||+++||+++|
T Consensus 84 ~~va~~-~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~D 160 (451)
T 2rkv_A 84 VVVKDL-RDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMD 160 (451)
T ss_dssp EEEEEC-TTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCC
T ss_pred EEEEeC-CCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhcccc
Confidence 998887 53 4666642 232 111 1233322110 010124579999999966 7999999999999999
Q ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCc-cCCCcccCcccCCCC--CCCCC------CCCCC----CCCCCCCeEEEEEEeC
Q 035829 151 GSAIFNFMKTSGEITRGVINDNDNIF-NNNVVLDCTSLFPPV--NFPKP------YQIVT----SPQSSGNIVFKRLLFD 217 (436)
Q Consensus 151 g~g~~~fl~~wa~~~rg~~~~~~~~~-~~~P~~dr~~l~~~~--~~p~~------~~~~~----~~~~~~~~~~~~f~f~ 217 (436)
|.|+.+||++||++|||.. .+.. ...|++||+.+.+.. ..|.+ +...+ ......++..++|+|+
T Consensus 161 g~g~~~Fl~awa~~~rg~~---~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~ 237 (451)
T 2rkv_A 161 MVGQDAVIRLLSKACRNDP---FTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFS 237 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCC---CCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCC---CCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEEC
Confidence 9999999999999999964 1100 025788987665431 22221 11111 1122356889999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHh-c-ccccccccccceeEEEEEeccccccCCCCCCCc
Q 035829 218 SKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIA-G-ERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRC 295 (436)
Q Consensus 218 ~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar-~-~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y 295 (436)
+++|++||+++.++.. ....++|++|+|+||+|+|++||| . ..++ +++.+.++||+|+|++ +|.+|
T Consensus 238 ~~~i~~LK~~a~~~~~----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~------~~~~l~~~vd~R~rl~--lP~~y 305 (451)
T 2rkv_A 238 PKAMSELKDAATKTLD----ASTKFVSTDDALSAFIWKSASRVRLERIDGS------APTEFCRAVDARPAMG--VSNNY 305 (451)
T ss_dssp HHHHHHHHHHHHTTCC----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTT------SEEEEEEEEECHHHHT--CCTTC
T ss_pred HHHHHHHHHHHhhhcc----CCCCCccHHHHHHHHHHHHHHHHHhccCCCC------CceEEEEEecccccCC--CCCCC
Confidence 9999999999986542 113579999999999999999998 2 3333 7899999999999998 89999
Q ss_pred ccceeeeeecccccccccchhHHHHHHHHHHHHHhcc-cc-ccchh-hhhhhhhhhc-----ccCCCCeEEEeccCCCCC
Q 035829 296 RGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMGG-EV-MHSNE-HLGFIKDMEE-----TWEDSRSFVLTSVVGLPC 367 (436)
Q Consensus 296 ~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~-~~-~~~~~-~~~~~~~~~~-----~~~~~~~~~~ssw~~~~~ 367 (436)
|||++..+.+.++++||.+.+|+++|.+||+++.+++ ++ +++.+ |++...+... .......+++|||+++++
T Consensus 306 ~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~ 385 (451)
T 2rkv_A 306 PGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGL 385 (451)
T ss_dssp CSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCG
T ss_pred cccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCc
Confidence 9999999999989999999999999999999999999 88 88877 6654332111 121223499999999999
Q ss_pred cccccC--CCceeeeeecc-cccccEEEEeeCCCCCcEEEEEecCHHHHHhhhcChhhhhhccC
Q 035829 368 YEVDFG--WGKPVWFSVGP-FLLLDFAILSSSSDGEGIEAWVVMFKEDMDKYEQEPSIKAYASS 428 (436)
Q Consensus 368 ~~~DFG--~G~P~~~~~~~-~~~~g~~~i~p~~~~~g~ev~v~L~~e~m~~l~~d~~~~~~~~~ 428 (436)
|++||| ||+|.+++.+. .+.+|+++++|++++||++|.|+|++++|++|++|+||++|++.
T Consensus 386 y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 386 WDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp GGCCTTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred cccccCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 999998 79999998654 34689999998766678999999999999999999999999874
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.93 E-value=1.8e-07 Score=93.03 Aligned_cols=276 Identities=14% Similarity=0.101 Sum_probs=152.7
Q ss_pred CcccCCccccccc--cccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhcccccccccCCceEEeCCCC-eEEEEEEe
Q 035829 12 RTYKLSLPDQLCS--KLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLIDSFSVDCNDHG-AAFTGAAI 88 (436)
Q Consensus 12 ~~~~Ls~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~g-v~f~~a~~ 88 (436)
..+|||++++.+. ..++..++-++.+. ..+.|+++|.+++..+|.|-.++.. .+.+ .+.+....
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l-------d~~~l~~A~~~lv~rh~~LRt~f~~------~~~~~~q~v~~~~ 72 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI-------DVDALSDAFDALLETHPVLASHLEQ------SSDGGWNLVADDL 72 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC-------CHHHHHHHHHHHHHHCGGGSEEEEE------CTTSSEEEEECCS
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC-------CHHHHHHHHHHHHHhCccceEEEEe------cCCcceeeeccCC
Confidence 5689999987543 23344444444332 4899999999999999999888751 1111 11111111
Q ss_pred ec---cCccccCCCCChhHhhccCCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeeceeccchhhHHHHHHHHHHHh
Q 035829 89 VG---CDISKFLQPPDMELLLQLIPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFNFMKTSGEIT 165 (436)
Q Consensus 89 ~~---~~~~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~ 165 (436)
. ....|+........+.. .. ..++ ...|++++.+.. ..++..|.+.+||.++||.|+..|++.|.+.+
T Consensus 73 -~~~~~~~~d~~~~~~~~~~~~---~~---~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 73 -LHSGICVIDGTAATNGSPSGN---AE---LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp -SSCCCEEEC---------------CC---CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred -CCCceEEEECCCCCcchhhhc---cc---CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 1 11112211111111111 00 1122 456899888877 77889999999999999999999999999988
Q ss_pred cC----CCCCCCCCccCCCccc--------CcccC-------C-CCCC-----C-C-CCCCCCCCCCCCCeEEEEEEeCH
Q 035829 166 RG----VINDNDNIFNNNVVLD--------CTSLF-------P-PVNF-----P-K-PYQIVTSPQSSGNIVFKRLLFDS 218 (436)
Q Consensus 166 rg----~~~~~~~~~~~~P~~d--------r~~l~-------~-~~~~-----p-~-~~~~~~~~~~~~~~~~~~f~f~~ 218 (436)
++ .. ...++..+.-+ +.... . .++. + . .++.............+.+.++.
T Consensus 144 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~ 220 (422)
T 1q9j_A 144 TDAVTTGD---PGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSK 220 (422)
T ss_dssp HHHHHSSS---CCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCH
T ss_pred HHhhccCC---CCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCH
Confidence 72 22 11100111111 10000 0 0000 0 0 01100001111223567889999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCCCCCCCcccc
Q 035829 219 KKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRCRGN 298 (436)
Q Consensus 219 ~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN 298 (436)
+..++||+.|.. ..+|.+.++.|.+-..+.|-+. ... ....+.++++.|....|+++..=+.|
T Consensus 221 ~~~~~l~~~a~~----------~~~t~~~~l~aa~~~~l~r~~~-~~~------~~v~~g~~~~~R~~~~~~~~~~~~~~ 283 (422)
T 1q9j_A 221 QQTSDLMAFGRE----------HRLSLNAVVAAAILLTEWQLRN-TPH------VPIPYVYPVDLRFVLAPPVAPTEATN 283 (422)
T ss_dssp HHHHHHHHHHTT----------TTCCHHHHHHHHHHHHHHHHHT-CSS------CCEEEEEEEETTTTSSSCCCTTTBSC
T ss_pred HHHHHHHHHHHH----------hCCCHHHHHHHHHHHHHHhccc-CCC------ceEEEeeeeecccccCCCCChhhhhh
Confidence 999999998874 3478899998876666655422 111 56789999999998765543211233
Q ss_pred eeeeeecccccccccchhHHHHHHHHHHHHHhc
Q 035829 299 IFWFARAEWSLAENDAIKVASLVREVIKAKRMG 331 (436)
Q Consensus 299 ~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~ 331 (436)
.+.+....+++. .+.++.+++..+++.+.+.
T Consensus 284 ~vG~f~n~lp~~--~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 284 LLGAASYLAEIG--PNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CEEEEEEEECCC--SSCCHHHHHHHHHHHHHHH
T ss_pred hheeeeeeeecc--CCCCHHHHHHHHHHHHHHH
Confidence 333322222322 1346777888888877664
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.42 E-value=5.4e-05 Score=77.34 Aligned_cols=271 Identities=9% Similarity=-0.014 Sum_probs=157.0
Q ss_pred CcccCCcccccc-------c--ccc-ceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhccccccccc---CCc-eEEeC
Q 035829 12 RTYKLSLPDQLC-------S--KLY-VSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI---DSF-SVDCN 77 (436)
Q Consensus 12 ~~~~Ls~lD~~~-------~--~~y-~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~~-~i~~~ 77 (436)
..+|||+.-+.+ + ..| +...+-++.+. ..+.|++++.+++..+|.|--++. +.. ++...
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l-------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 167 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL-------ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHE 167 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC-------CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECS
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC-------CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECC
Confidence 568999875422 1 123 44555555433 489999999999999999987765 111 11111
Q ss_pred CCCeEEEEEEeeccCccccCCCCChhHhhccCCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeeceeccchhhHHHH
Q 035829 78 DHGAAFTGAAIVGCDISKFLQPPDMELLLQLIPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFNF 157 (436)
Q Consensus 78 ~~gv~f~~a~~~~~~~~dl~~~p~~~~~~~l~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~f 157 (436)
...+.+ .+.++... ....+....-.. . + ....|++++.+-....+...|.+.+||.++||.|+..|
T Consensus 168 ~~~~~~--------~~~~~~~~-~~~~~~~~~~~~-f--d--l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l 233 (520)
T 2jgp_A 168 DVPFAL--------AYSEVTEE-EARELVSSLVQP-F--D--LEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL 233 (520)
T ss_dssp CCCCCC--------EEEECCHH-HHHHHHHHTCCC-C--C--TTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred CCCCce--------EEEeCCHH-HHHHHHHHhcCC-C--C--CCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence 111111 11111100 000111111111 1 1 23458888887777667899999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCccCCCc-----ccCcccCC-------------CCCCCC--CCCCC-C-CCCCCCCeEEEEEE
Q 035829 158 MKTSGEITRGVINDNDNIFNNNVV-----LDCTSLFP-------------PVNFPK--PYQIV-T-SPQSSGNIVFKRLL 215 (436)
Q Consensus 158 l~~wa~~~rg~~~~~~~~~~~~P~-----~dr~~l~~-------------~~~~p~--~~~~~-~-~~~~~~~~~~~~f~ 215 (436)
++.+.+.+++.. .+.. ..+. +.+..... -.+.|. .++.. + +...........+.
T Consensus 234 ~~el~~~Y~~~~---l~~~-~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~ 309 (520)
T 2jgp_A 234 LAEWVQLYQGDV---LPEL-RIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIG 309 (520)
T ss_dssp HHHHHHHHTTCC---CCCC-SCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEE
T ss_pred HHHHHHHHccCC---CCCC-CCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEe
Confidence 999999998753 1110 1111 11100000 001111 01110 0 11122345667889
Q ss_pred eCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCCCCCCCc
Q 035829 216 FDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRC 295 (436)
Q Consensus 216 f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y 295 (436)
++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ . ....+.++++.|..- --.+.
T Consensus 310 l~~~~~~~l~~~a~~~----------~~T~~~~l~aa~a~~L~~~~~---~------~dv~~g~~~~gR~~~---~~~~~ 367 (520)
T 2jgp_A 310 AGKALTEGLHQLAQAT----------GTTLYMVLLAAYNVLLAKYAG---Q------EDIIVGTPITGRSHA---DLEPI 367 (520)
T ss_dssp CCHHHHHHHHHHHHHH----------TCCHHHHHHHHHHHHHHHHHT---C------SCEEEEEEECCCCSG---GGTTC
T ss_pred CCHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHhcC---C------CCeEEEeccCCCCch---hhhcc
Confidence 9999999999998754 368888888865555544322 1 457899999999752 22456
Q ss_pred ccceeeeeecccccccccchhHHHHHHHHHHHHHhc
Q 035829 296 RGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMG 331 (436)
Q Consensus 296 ~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~ 331 (436)
+|+.+.....++... .+.++.+++..+++.+.+.
T Consensus 368 vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 368 VGMFVNTLAMRNKPQ--REKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp CSCCCEEEEEEECCC--TTSBHHHHHHHHHHHHHHH
T ss_pred EEeeeeeeeEEecCC--CCCCHHHHHHHHHHHHHHH
Confidence 777666555554443 2457888888888877664
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.40 E-value=8.3e-06 Score=82.88 Aligned_cols=277 Identities=10% Similarity=-0.018 Sum_probs=154.5
Q ss_pred CcccCCcccccc-------ccccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhccccccccc---CCceEEeCCCCe
Q 035829 12 RTYKLSLPDQLC-------SKLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI---DSFSVDCNDHGA 81 (436)
Q Consensus 12 ~~~~Ls~lD~~~-------~~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~---~~~~i~~~~~gv 81 (436)
..+|||+.-+-+ +.......+.|+.... ...++|++++.+++..+|.|--++. +... ......+
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~ 85 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR-----IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENAD 85 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS-----CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCC
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC-----CCHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCC
Confidence 579999986522 1111233444444432 2489999999999999999987775 2222 2211112
Q ss_pred EEEEEEeeccCccccCCCCCh-hHh----hccCCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeeceeccchhhHHH
Q 035829 82 AFTGAAIVGCDISKFLQPPDM-ELL----LQLIPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFN 156 (436)
Q Consensus 82 ~f~~a~~~~~~~~dl~~~p~~-~~~----~~l~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~ 156 (436)
.+.+. |+...+.. ..+ ....-.. ++....|++++.+-....+...|.+.+||.++||.|+..
T Consensus 86 ~~~~~--------d~~~~~~~~~~~~~~~~~~~~~~-----fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~ 152 (493)
T 4hvm_A 86 ALVRS--------DLRGHPDPQARCVELLRADRDRP-----TDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM 152 (493)
T ss_dssp CEEEE--------ECTTSSSHHHHHHHHHHHHHSSC-----CCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred CceEE--------ECCCCCchHHHHHHHHHHHhcCC-----CCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence 22222 22221111 111 1111111 012345888888877776778999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCccCCC--cccCc--ccCCC-------------CCCCCCCCCCCCCCCCCCeEEEEEEeCHH
Q 035829 157 FMKTSGEITRGVINDNDNIFNNNV--VLDCT--SLFPP-------------VNFPKPYQIVTSPQSSGNIVFKRLLFDSK 219 (436)
Q Consensus 157 fl~~wa~~~rg~~~~~~~~~~~~P--~~dr~--~l~~~-------------~~~p~~~~~~~~~~~~~~~~~~~f~f~~~ 219 (436)
|++.+.+.+.|... +. .... .+.+. .+... .+.|. .. .............+.++.+
T Consensus 153 l~~~l~~~Y~g~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~-l~--~~~~~~~~~~~~~~~l~~~ 225 (493)
T 4hvm_A 153 VLGAVWQAYYGRFR---PA-QYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPV-RG--GDGGPVGPPETSRLRVPGS 225 (493)
T ss_dssp HHHHHHHHHTTCCC---GG-GSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCC-CC---------CCEEEEEEEEHH
T ss_pred HHHHHHHHhCCCCC---Cc-CHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCC-CC--CCCCCCCCCeeEEEEcCHH
Confidence 99999999977541 10 0000 01111 11000 01111 10 0000111256778899999
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCcc--HHHHHHHHHHHHHHHHhcc-------cccccccccceeEEEEEeccccccCCC
Q 035829 220 KIAALKEKMNKELMGNNFDDRLQAT--RFGVASALIWGAFIAIAGE-------RKREIHNKLYSHAMYYTMNVRNKTNPP 290 (436)
Q Consensus 220 ~l~~Lk~~~~~~~~~~~~~~~~~~S--~~d~l~A~~W~~~~~Ar~~-------~~~~~~~~~~~~~l~~~vd~R~rl~pp 290 (436)
..++|++.|... .+| .+.++.|.+-..+.+-+.- ..+ .....+.++++.|..-
T Consensus 226 ~~~~l~~~a~~~----------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-----~~dv~~g~~~~gR~~~--- 287 (493)
T 4hvm_A 226 RWQALTEPGGPL----------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-----KDSLYLSTEVDLRDHL--- 287 (493)
T ss_dssp HHHHHHCC----------------CHHHHHHHHHHHHHHHC---------------------CEEEEEEEEEHHHHT---
T ss_pred HHHHHHHHHHHc----------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-----CCCEEEEeeccCCCCc---
Confidence 999999877643 367 8888888755555443100 011 2568899999999762
Q ss_pred CCCCcccceeeeeecccccccccchhHHHHHHHHHHHHHhcc
Q 035829 291 MIPRCRGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMGG 332 (436)
Q Consensus 291 lp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~ 332 (436)
--.+.+|+.+.....++......+.++.+++..+++.+.+.-
T Consensus 288 ~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~ 329 (493)
T 4hvm_A 288 QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAV 329 (493)
T ss_dssp TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHH
T ss_pred chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHH
Confidence 345677877766555555442224578888888888776654
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.32 E-value=1.8e-05 Score=78.89 Aligned_cols=244 Identities=14% Similarity=0.024 Sum_probs=142.9
Q ss_pred hHHHHHHHHHHhhhhcccccccccCCceEEeCCCCeEEEEEEeeccCccccCCCCCh-hHh----hccCCCCCCCCCCcc
Q 035829 46 KSDLLKQSLAKSLTHYYPFAGRLIDSFSVDCNDHGAAFTGAAIVGCDISKFLQPPDM-ELL----LQLIPPSPQLSNLDI 120 (436)
Q Consensus 46 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~gv~f~~a~~~~~~~~dl~~~p~~-~~~----~~l~P~~~~~~~~~~ 120 (436)
..+.|++++.+++..+|.|--++...-.+......+. ..+.|+...++. ..+ ....-.. . + .
T Consensus 34 d~~~L~~A~~~lv~rh~~LRt~f~~~~~~v~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~-f--d--l 100 (436)
T 1l5a_A 34 DTTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPP--------IDYQDLSIHLEAEPLAWRQIEQDLQRS-S--T--L 100 (436)
T ss_dssp CHHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCC--------CEEEECTTCTTHHHHHHHHHHHHHTSC-C--C--C
T ss_pred CHHHHHHHHHHHHHHhheeEEEEEecCCeECCCcCCC--------ccEEeCCCCCCHHHHHHHHHHHHhcCC-C--C--c
Confidence 4899999999999999999887752100111111111 112233222211 111 1111111 0 1 2
Q ss_pred cCCceeEEEEeeeccCeEEEeeeeceeccchhhHHHHHHHHHHHhc----CCCCCCCCCccCCCccc-----CcccCCC-
Q 035829 121 SERELLAVQVNLFSGGEMAIGVCFSHGVADGSAIFNFMKTSGEITR----GVINDNDNIFNNNVVLD-----CTSLFPP- 190 (436)
Q Consensus 121 ~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~~~~~~~P~~d-----r~~l~~~- 190 (436)
...|++++.+-....+...|.+.+||.++||.|+..|++.+.+.++ |.. ...+..+.-| +..+...
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~ 176 (436)
T 1l5a_A 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQT----PTAAFKPYQSYLEEEAAYLTSHR 176 (436)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCC----CCCCCCCHHHHHHHHHHHHTSHH
T ss_pred CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCC----CCCCccCHHHHHHHHHHhhccHh
Confidence 3458888887766668899999999999999999999999999887 432 1100111110 0000000
Q ss_pred ------------CCCCCC--CCCCCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHH
Q 035829 191 ------------VNFPKP--YQIVTSPQSSGNIVFKRLLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGA 256 (436)
Q Consensus 191 ------------~~~p~~--~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~ 256 (436)
.+.|.. ++. .............+.++.+..++|++.+... .+|.+.++.|.+-..
T Consensus 177 ~~~~~~~W~~~l~~~~~~~~lp~-~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~~t~~~~l~aa~~~~ 245 (436)
T 1l5a_A 177 YWQDKQFWQGYLREAPDLTLTSA-TYDPQLSHAVSLSYTLNSQLNHLLLKLANAN----------QIGWPDALVALCALY 245 (436)
T ss_dssp HHHHHHHHHHHHHTSCCCCBCCT-TCCGGGCCEEEEEEECCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcccCCC-CCCCCcccceeeEEecCHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHH
Confidence 011110 110 0011123345778899999999999998753 368888888875555
Q ss_pred HHHHhcccccccccccceeEEEEEeccccccCCCCCCCcccceeeeeecccccccccchhHHHHHHHHHHHHHhcc
Q 035829 257 FIAIAGERKREIHNKLYSHAMYYTMNVRNKTNPPMIPRCRGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMGG 332 (436)
Q Consensus 257 ~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~ 332 (436)
+.+--+ ....+.++++.|.. +--.+.+|+.+-....++... .+.++.+++..+++.+.+.-
T Consensus 246 L~~~~g----------~dv~ig~~~~~R~~---~~~~~~vG~f~n~lplr~~~~--~~~t~~~~l~~v~~~~~~~~ 306 (436)
T 1l5a_A 246 LESAEP----------DAPWLWLPFMNRWG---SVAANVPGLMVNSLPLLRLSA--QQTSLGNYLKQSGQAIRSLY 306 (436)
T ss_dssp HHHHST----------TCCEEEEEECCCTT---SGGGGSCSCCCEEEEEECCCC--TTCBHHHHHHHHHHHHHHHH
T ss_pred HHHhhC----------CceEEeeecccCCC---hHHhcCcceEEEEEEEEEecC--CCCCHHHHHHHHHHHHHHHh
Confidence 444322 34689999999965 123466777666555554443 24578888888888776643
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.29 E-value=0.00011 Score=73.71 Aligned_cols=280 Identities=9% Similarity=-0.015 Sum_probs=156.6
Q ss_pred CcccCCccccccc------cccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhcccccccccC---Cc-eEEeC--CC
Q 035829 12 RTYKLSLPDQLCS------KLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLID---SF-SVDCN--DH 79 (436)
Q Consensus 12 ~~~~Ls~lD~~~~------~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~---~~-~i~~~--~~ 79 (436)
..+|||+..+++. .......+.|+.... ...+.|+++|.+++..++.|--++.. .. .+... ..
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~-----ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG-----FDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC-----CCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC-----CCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 5689998876321 112233444544432 35899999999999999999888751 21 11111 11
Q ss_pred CeEEEEEEeeccCccccCCCCCh-hH---hh-cc-CCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeeceeccchhh
Q 035829 80 GAAFTGAAIVGCDISKFLQPPDM-EL---LL-QL-IPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHGVADGSA 153 (436)
Q Consensus 80 gv~f~~a~~~~~~~~dl~~~p~~-~~---~~-~l-~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~v~Dg~g 153 (436)
.+.+.+. |+....+. .. +. .+ -|.. ....|++++.+-... ++-.|-+.+||.++||.|
T Consensus 91 ~~~~~~~--------d~~~~~~~~~~~~~~~~~~~~~fd-------l~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S 154 (466)
T 2xhg_A 91 LYDFFSY--------NLTAQPDVQQAIEAETQRLHSSMN-------LQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGIS 154 (466)
T ss_dssp CCEEEEE--------ECTTCSCHHHHHHHHHHHHHTTCC-------TTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHH
T ss_pred cceeEEE--------ecCCcccHHHHHHHHHHHHHhccC-------CCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhh
Confidence 2222211 22111111 11 11 11 1211 234588888887776 444577999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccCCC-cc-c-----CcccCC-----CC--------CCCC-CCCCCC--CCCCCCCeE
Q 035829 154 IFNFMKTSGEITRGVINDNDNIFNNNV-VL-D-----CTSLFP-----PV--------NFPK-PYQIVT--SPQSSGNIV 210 (436)
Q Consensus 154 ~~~fl~~wa~~~rg~~~~~~~~~~~~P-~~-d-----r~~l~~-----~~--------~~p~-~~~~~~--~~~~~~~~~ 210 (436)
+..|++.+.+.+++...+....++..+ .+ | +..+.. .+ +.|. .++... .........
T Consensus 155 ~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~ 234 (466)
T 2xhg_A 155 WRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVR 234 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccccccccccce
Confidence 999999999988631100011110111 11 0 100000 00 0110 111100 011122346
Q ss_pred EEEEEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCC-
Q 035829 211 FKRLLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNP- 289 (436)
Q Consensus 211 ~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p- 289 (436)
...+.++.+..++|++.+... ..+|.++++.|.+-..+.+-.+ . ....+.++++.|....+
T Consensus 235 ~~~~~l~~~~~~~l~~~~~~~---------~~~t~~~~llaa~~~~l~~~~~---~------~dv~ig~~~~gR~~~~~~ 296 (466)
T 2xhg_A 235 NMRIRLHPEETEQLLKHANQA---------YQTEINDLLLAALGLAFAEWSK---L------AQIVIHLEGHGREDIIEQ 296 (466)
T ss_dssp EEEEECCHHHHHHHHHTGGGT---------TTCCHHHHHHHHHHHHHHHHHC---C------SEEEEEEEECCCCSCSTT
T ss_pred EEEEEcCHHHHHHHHHHhHHh---------hCCCHHHHHHHHHHHHHHHHhC---C------CceEEEecCCCCCccccC
Confidence 678899999999999877542 2468888888876555554432 1 45789999999976421
Q ss_pred CCCCCcccceeeeeecccccccccchhHHHHHHHHHHHHHhcc
Q 035829 290 PMIPRCRGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMGG 332 (436)
Q Consensus 290 plp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~ 332 (436)
+--.+-+|+.+......+... .+.++.+++..|++.+..+.
T Consensus 297 ~~~~~~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 297 ANVARTVGWFTSQYPVLLDLK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CCCTTCCSCCCEEEEEEEECS--CCCSHHHHHHHHHHHHHHSG
T ss_pred CCccccccceeeeccEEEecC--CCCCHHHHHHHHHHHHHhCc
Confidence 123456677665554444433 24578889999999887764
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.80 E-value=0.0006 Score=77.54 Aligned_cols=276 Identities=9% Similarity=0.008 Sum_probs=155.7
Q ss_pred CcccCCcccccc-------c--ccc-ceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhcccccccccC-----CceEEe
Q 035829 12 RTYKLSLPDQLC-------S--KLY-VSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLID-----SFSVDC 76 (436)
Q Consensus 12 ~~~~Ls~lD~~~-------~--~~y-~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~-----~~~i~~ 76 (436)
..+|||+.-+-+ + ..| ++.++-++.+ ..++.|++++.+++..++.|--++.. -.++..
T Consensus 11 d~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~-------ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~ 83 (1304)
T 2vsq_A 11 DMYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGS-------LNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVL 83 (1304)
T ss_dssp EEEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEEC-------CCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEE
T ss_pred CcCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCC-------cCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEEC
Confidence 468999864321 1 123 3333434433 24899999999999999999877651 111211
Q ss_pred CCCCeEEEEEEeeccCccccCCCCCh---hHhhcc------CCCCCCCCCCcccCCceeEEEEeeeccCeEEEeeeecee
Q 035829 77 NDHGAAFTGAAIVGCDISKFLQPPDM---ELLLQL------IPPSPQLSNLDISERELLAVQVNLFSGGEMAIGVCFSHG 147 (436)
Q Consensus 77 ~~~gv~f~~a~~~~~~~~dl~~~p~~---~~~~~l------~P~~~~~~~~~~~~~P~l~vQvt~~~cgG~~L~~~~~H~ 147 (436)
....+.+ .+.|+...+.. ..+..+ -|.. ....|++++.+-....+...|-+.+||.
T Consensus 84 ~~~~~~~--------~~~d~~~~~~~~~~~~~~~~~~~~~~~~fd-------l~~~pl~r~~l~~~~~~~~~l~~~~HHi 148 (1304)
T 2vsq_A 84 KKRQFHI--------EEIDLTHLTGSEQTAKINEYKEQDKIRGFD-------LTRDIPMRAAIFKKAEESFEWVWSYHHI 148 (1304)
T ss_dssp SCCCCCE--------EEEECTTSCHHHHHHHHHHHHHHHHHHCCC-------TTTSCSEEEEEEEEETTEEEEEEEEEGG
T ss_pred CCCCCce--------EEEECCCCCchhHHHHHHHHHHHHhcCCCC-------CCCCCcEEEEEEEECCCcEEEEEecCce
Confidence 1111111 11233222211 111111 1221 2345899888887777889999999999
Q ss_pred ccchhhHHHHHHHHHHHhcCCCCCCCCCccCC-CcccCcc-cCCC-------------CCCCC--CCCCCC-CCCCCCCe
Q 035829 148 VADGSAIFNFMKTSGEITRGVINDNDNIFNNN-VVLDCTS-LFPP-------------VNFPK--PYQIVT-SPQSSGNI 209 (436)
Q Consensus 148 v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~-P~~dr~~-l~~~-------------~~~p~--~~~~~~-~~~~~~~~ 209 (436)
++||.|+..|++.+++.+++...+....++.. +.-|-.. +... .+.|. .++... ........
T Consensus 149 i~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~ 228 (1304)
T 2vsq_A 149 ILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLRYWREYLEGFEGQTTFAEQRKKQKDGYEP 228 (1304)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCE
T ss_pred eechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhHHHHHHHHHhCCCCccccCCCCCCccccccCc
Confidence 99999999999999998864211001111011 1111000 0000 01111 122111 11112334
Q ss_pred EEEEEEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccccccccccceeEEEEEeccccccCC
Q 035829 210 VFKRLLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKREIHNKLYSHAMYYTMNVRNKTNP 289 (436)
Q Consensus 210 ~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~~~~~~~~~~~l~~~vd~R~rl~p 289 (436)
....+.++++..++||+.+... .+|.+.++.|.+-..+.|--+ . ....+..+++.|.+..+
T Consensus 229 ~~~~~~l~~~~~~~L~~~a~~~----------~~T~~~vllaa~a~~L~r~tg---~------~dvv~G~pvsgR~~~~~ 289 (1304)
T 2vsq_A 229 KELLFSPSEAETKAFTELAKSQ----------HTTLSTALQAVWSVLISRYQQ---S------GDLAFGTVVSGRPAEIK 289 (1304)
T ss_dssp EEEEECCCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHHT---C------SEEEEEEEECCCCTTST
T ss_pred ceEEEecCHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHhcC---C------CCEEEEEEeCCCCccch
Confidence 6677889999999999998863 368888888765444443322 1 56789999999976322
Q ss_pred CCCCCcccceeeeeecccccccccchhHHHHHHHHHHHHHhc
Q 035829 290 PMIPRCRGNIFWFARAEWSLAENDAIKVASLVREVIKAKRMG 331 (436)
Q Consensus 290 plp~~Y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~ 331 (436)
.+ ++-+|+.+-....++..+ .+.++.++...+++...+.
T Consensus 290 ~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 290 GV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp TG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHHH
T ss_pred hh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHHh
Confidence 12 455666655544444433 2457888888888877654
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.63 E-value=0.0015 Score=66.63 Aligned_cols=183 Identities=12% Similarity=-0.012 Sum_probs=107.2
Q ss_pred eEEEeeeeceeccchhhHHHHHHHHHHHhcCCCCCCCCCccCCCccc----CcccCCCC----CCCCC-C----------
Q 035829 137 EMAIGVCFSHGVADGSAIFNFMKTSGEITRGVINDNDNIFNNNVVLD----CTSLFPPV----NFPKP-Y---------- 197 (436)
Q Consensus 137 G~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~~~~~~~P~~d----r~~l~~~~----~~p~~-~---------- 197 (436)
-.-|.+.+||.++||.|...|++.+=+........+... ..|.++ ...|.|+- ++|.. .
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~--~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~ 254 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSR--EMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTE 254 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGG--GSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCcc--CCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHH
Confidence 466778899999999999999999887765321100001 122221 11222221 11100 0
Q ss_pred ---------CCC--CCCCCCCCeEEEEEEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhccccc
Q 035829 198 ---------QIV--TSPQSSGNIVFKRLLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERKR 266 (436)
Q Consensus 198 ---------~~~--~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~~ 266 (436)
+.+ +.......-....+.|++++.++|++.|.+.. ++.+|-+.+|.|.+-.++.+... +++
T Consensus 255 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~-------~~g~Tvt~~l~Aa~~~al~~~~~-~~~ 326 (519)
T 3fot_A 255 YTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRL-------GPGFTISHLTQAAIVLALLDHLK-PND 326 (519)
T ss_dssp HHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHT-------CTTCCHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcC-------CCCeeHHHHHHHHHHHHHHhhcC-Ccc
Confidence 001 11111223445788999999999999999864 45689999998776666655321 111
Q ss_pred ccccccceeEEEEEeccccccCCCCCCCcccceeeeeeccccc-c---------cccch-hHHHHHHHHHHHHHhc
Q 035829 267 EIHNKLYSHAMYYTMNVRNKTNPPMIPRCRGNIFWFARAEWSL-A---------ENDAI-KVASLVREVIKAKRMG 331 (436)
Q Consensus 267 ~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~-~---------~l~~~-~l~~~A~~ir~ai~~~ 331 (436)
. .......+.++||+|+++.++.-.+|||.+........+. . ++... .+.++|+.+++.....
T Consensus 327 ~--~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~ 400 (519)
T 3fot_A 327 L--SDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQW 400 (519)
T ss_dssp C--CTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--CCCccEEEEeeeeccccCCCcccccccceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhcc
Confidence 0 0124578999999999998765567888877755443321 1 11111 1566777777766663
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=74.21 E-value=2.1 Score=37.78 Aligned_cols=44 Identities=18% Similarity=0.351 Sum_probs=32.3
Q ss_pred CceeEEEEeeeccCe--EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 123 RELLAVQVNLFSGGE--MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 123 ~P~l~vQvt~~~cgG--~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
.|++.+=--.-+.|. +-|++++||.++||.-..+|++.+.+.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 477764221112243 67889999999999999999999988763
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=72.84 E-value=2.4 Score=37.56 Aligned_cols=43 Identities=26% Similarity=0.414 Sum_probs=30.9
Q ss_pred CceeEEEEeeeccCe--EEEeeeeceeccchhhHHHHHHHHHHHh
Q 035829 123 RELLAVQVNLFSGGE--MAIGVCFSHGVADGSAIFNFMKTSGEIT 165 (436)
Q Consensus 123 ~P~l~vQvt~~~cgG--~~L~~~~~H~v~Dg~g~~~fl~~wa~~~ 165 (436)
.|++.+=--.-+.|. +-|++++||.++||.-...|++.+.+..
T Consensus 172 ~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 172 YPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 577754111112233 6788999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=72.57 E-value=2.4 Score=37.56 Aligned_cols=44 Identities=14% Similarity=0.257 Sum_probs=32.4
Q ss_pred CceeEEEEeeeccCe--EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 123 RELLAVQVNLFSGGE--MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 123 ~P~l~vQvt~~~cgG--~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
.|++.+---.-+.|. +-|++++||.++||.-..+|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 477755221122233 67889999999999999999999988764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.11 E-value=3 Score=37.46 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=27.0
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=68.99 E-value=2.7 Score=37.36 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=27.2
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhcC
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITRG 167 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 167 (436)
+-|+++++|.++||.-...|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458899999999999999999999998854
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=68.80 E-value=3.3 Score=37.10 Aligned_cols=30 Identities=23% Similarity=0.468 Sum_probs=27.1
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhcC
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITRG 167 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 167 (436)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999987753
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=68.67 E-value=3.3 Score=37.35 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=26.8
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998774
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=67.40 E-value=3.6 Score=37.56 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=26.6
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998774
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=62.32 E-value=5.1 Score=36.36 Aligned_cols=30 Identities=13% Similarity=0.232 Sum_probs=27.3
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhcC
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITRG 167 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 167 (436)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=60.96 E-value=5.6 Score=35.95 Aligned_cols=30 Identities=27% Similarity=0.526 Sum_probs=27.1
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhcC
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITRG 167 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 167 (436)
+-|+++++|.++||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998753
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=52.25 E-value=10 Score=20.15 Aligned_cols=20 Identities=25% Similarity=0.180 Sum_probs=16.1
Q ss_pred CCCccHHHHHHHHHHHHHHH
Q 035829 240 RLQATRFGVASALIWGAFIA 259 (436)
Q Consensus 240 ~~~~S~~d~l~A~~W~~~~~ 259 (436)
.+-+++.|-|+-++|+++..
T Consensus 5 psvftsqdylsdhlwralna 24 (26)
T 2xl1_A 5 PSVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred CceeecHHHHHHHHHHHHhc
Confidence 34578899999999998753
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=41.95 E-value=5.4 Score=39.17 Aligned_cols=29 Identities=17% Similarity=0.390 Sum_probs=0.0
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhc
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITR 166 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~r 166 (436)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35999999999999999999999988764
No 25
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=41.06 E-value=64 Score=21.54 Aligned_cols=45 Identities=7% Similarity=0.070 Sum_probs=32.8
Q ss_pred CCeEEEEEEeCHHHHHHHHHHhhhhccCCCCCCCCCccHHHHHHHHHHHHHHHHhcccc
Q 035829 207 GNIVFKRLLFDSKKIAALKEKMNKELMGNNFDDRLQATRFGVASALIWGAFIAIAGERK 265 (436)
Q Consensus 207 ~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~~~~~~~~S~~d~l~A~~W~~~~~Ar~~~~ 265 (436)
++.-...|+||.++-+.|++.|.++.. .+..+|=+.+.++-....
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~e--------------SV~sfIKR~IlK~l~ykk 57 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEVE--------------SVNSFVKRHILKTIIYKK 57 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTCS--------------CHHHHHHHHHHHHHCSSC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHhc
Confidence 445677899999999999999987642 245566777777755443
No 26
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=39.24 E-value=62 Score=20.80 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=20.0
Q ss_pred EEEEEEeCHHHHHHHHHHhhhhc
Q 035829 210 VFKRLLFDSKKIAALKEKMNKEL 232 (436)
Q Consensus 210 ~~~~f~f~~~~l~~Lk~~~~~~~ 232 (436)
....|+||+++-+.|++.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 45689999999999999998764
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=21.93 E-value=1e+02 Score=23.86 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=28.9
Q ss_pred cccccceEEEEEeCCCCCcchhhhHHHHHHHHHHhhhhccccccccc
Q 035829 23 CSKLYVSLVFFYSTNCKQQDLRKKSDLLKQSLAKSLTHYYPFAGRLI 69 (436)
Q Consensus 23 ~~~~y~~~~~~f~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~ 69 (436)
|....-.....|+.+ +++.++++|...+.+-..+||.+.
T Consensus 78 mgsgsgvm~i~f~gd--------dlea~ekalkemirqarkfagtvt 116 (170)
T 4hhu_A 78 MGSGSGVMVIVFEGD--------DLEALEKALKEMIRQARKFAGTVT 116 (170)
T ss_dssp ECTTCCEEEEEEECS--------CHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EeCCceEEEEEEecC--------cHHHHHHHHHHHHHHHHhhcceEE
Confidence 333333445666655 378999999999999999999886
No 28
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=20.97 E-value=53 Score=36.28 Aligned_cols=30 Identities=13% Similarity=0.367 Sum_probs=27.0
Q ss_pred EEEeeeeceeccchhhHHHHHHHHHHHhcC
Q 035829 138 MAIGVCFSHGVADGSAIFNFMKTSGEITRG 167 (436)
Q Consensus 138 ~~L~~~~~H~v~Dg~g~~~fl~~wa~~~rg 167 (436)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999999887653
Done!