BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035835
(400 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 163/329 (49%), Gaps = 42/329 (12%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPD---IVGGR-----TLHFFSVYDGHGGSHVV 141
+P +G SI G M+DAVS F + ++ GR HFF VYDGHGGS V
Sbjct: 8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVA 67
Query: 142 PLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALST 201
Y MH L L + K++ G W + + A+ SF R+D S
Sbjct: 68 N---------YCRERMH-LALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESV 117
Query: 202 CALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPD 261
PE+ +GS ++VA+V + VANCGDSRAVLCR +P D KP R D
Sbjct: 118 A-----PET-----VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRED 167
Query: 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLIL 321
E RI AAGGK+I NG RV+G+L MSRS+ GD LK PE++ +R D+CLIL
Sbjct: 168 EAARIEAAGGKVIQWNGARVFGVLAMSRSI-GDRYLKPSIIPDPEVTAVKRVKEDDCLIL 226
Query: 322 ASDGIWDVISDDLACRVASA---------CLREGSAATAPRSRYSXXXXXXXXXXXXXXX 372
ASDG+WDV++D+ AC +A + G++ A R
Sbjct: 227 ASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR--KEGKDPAAMSAAEYL 284
Query: 373 XXXXXXXGSHDNISVIVVDL--RRKAKGR 399
GS DNISV+VVDL RRK K +
Sbjct: 285 SKLAIQRGSKDNISVVVVDLKPRRKLKSK 313
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 162/328 (49%), Gaps = 40/328 (12%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPD---IVGGR-----TLHFFSVYDGHGGSHVV 141
+P +G SI G M+DAVS F + ++ GR HFF VYDGHGGS V
Sbjct: 11 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVA 70
Query: 142 PLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALST 201
Y MH L L + K++ G W + + A+ SF R+D S
Sbjct: 71 N---------YCRERMH-LALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESV 120
Query: 202 CALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPD 261
PE+ +GS ++VA+V + VANCGDSRAVLCR +P D KP R D
Sbjct: 121 A-----PET-----VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRED 170
Query: 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLIL 321
E RI AAGGK+I NG RV+G+L MSRS+ GD LK PE++ +R D+CLIL
Sbjct: 171 EAARIEAAGGKVIQWNGARVFGVLAMSRSI-GDRYLKPSIIPDPEVTAVKRVKEDDCLIL 229
Query: 322 ASDGIWDVISDDLACRVASACLR--------EGSAATAPRSRYSXXXXXXXXXXXXXXXX 373
ASDG+WDV++D+ AC +A + G A+ R
Sbjct: 230 ASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRK-EGKDPAAMSAAEYLS 288
Query: 374 XXXXXXGSHDNISVIVVDL--RRKAKGR 399
GS DNISV+VVDL RRK K +
Sbjct: 289 KLAIQRGSKDNISVVVVDLKPRRKLKSK 316
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 167/331 (50%), Gaps = 39/331 (11%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFR---PDIVGGR---------TLHFFSVYDGHGG 137
+P +G SI G M+D+VS F + ++ GR + HFF VYDGHGG
Sbjct: 11 VPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGG 70
Query: 138 SHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQA 197
S V Y MH L LT+ K++ E G W++ + A+ SF R+D +
Sbjct: 71 SQVAN---------YCRERMH-LALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVD-S 119
Query: 198 ALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKP 257
+ T A PE+ +GS ++VA+V + VANCGDSRAVLCR P+ D KP
Sbjct: 120 EIETVAHA--PET-----VGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKP 172
Query: 258 QRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDE 317
R DE RI AAGGK+I NG RV+G+L MSRS+ GD LK PE++ R D+
Sbjct: 173 DRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSI-GDRYLKPSVIPDPEVTSVRRVKEDD 231
Query: 318 CLILASDGIWDVISDDLACRVASA--CLREGSAATAPRSRYSXXXXXX----XXXXXXXX 371
CLILASDG+WDV++++ C +A L A A +
Sbjct: 232 CLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEY 291
Query: 372 XXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNISV+VVDL+ RK K +S
Sbjct: 292 LSKMALQKGSKDNISVVVVDLKGIRKFKSKS 322
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 163/332 (49%), Gaps = 44/332 (13%)
Query: 86 SENPMPEFGCISIQGLAESMDDAVSVKEEFFRPD---IVGGR-----TLHFFSVYDGHGG 137
S +P +G SI G M+DAVS F + ++ GR HFF VYDGHGG
Sbjct: 19 SHMSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGG 78
Query: 138 SHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQA 197
S V Y MH L L + K++ G W + + A+ SF R+D
Sbjct: 79 SQVAN---------YCRERMH-LALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 198 ALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKP 257
S PE+ +GS ++VA+V + VANCGDSRAVLCR +P D KP
Sbjct: 129 IESVA-----PET-----VGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKP 178
Query: 258 QRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDE 317
R DE RI AAGGK+I NG RV+G+L MSRS+ GD LK PE++ +R D+
Sbjct: 179 DREDEAARIEAAGGKVIQWNGARVFGVLAMSRSI-GDRYLKPSIIPDPEVTAVKRVKEDD 237
Query: 318 CLILASDGIWDVISDDLACRVA----------SACLREGSAATAPRSRYSXXXXXXXXXX 367
CLILASDG+WDV++D+ AC +A +A + S R +
Sbjct: 238 CLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEG---KDPAAMS 294
Query: 368 XXXXXXXXXXXXGSHDNISVIVVDL--RRKAK 397
GS DNISV+VVDL RRK K
Sbjct: 295 AAEYLSKLAIQRGSKDNISVVVVDLKPRRKLK 326
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 162/343 (47%), Gaps = 50/343 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 16 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 75
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D +K+ E +W+ +
Sbjct: 76 GHKVAD---------YCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKV----FTSC 122
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 123 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 182
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 183 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 241
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 242 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 297
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNIS+IV+DL+ RK K R+
Sbjct: 298 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 340
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 161/343 (46%), Gaps = 50/343 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 19 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 78
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D K+ E +W+ +
Sbjct: 79 GHKVAD---------YCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV----FTSC 125
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 126 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 185
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 186 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 244
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 245 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 300
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNIS+IV+DL+ RK K R+
Sbjct: 301 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 343
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 161/343 (46%), Gaps = 50/343 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 13 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 72
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D K+ E +W+ +
Sbjct: 73 GHKVAD---------YCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV----FTSC 119
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 120 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 179
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 180 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 238
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 239 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 294
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNIS+IV+DL+ RK K R+
Sbjct: 295 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 337
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 161/343 (46%), Gaps = 50/343 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 26 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 85
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D K+ E +W+ +
Sbjct: 86 GHKVAD---------YCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV----FTSC 132
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 133 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 192
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 193 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 251
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 252 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 307
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNIS+IV+DL+ RK K R+
Sbjct: 308 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 350
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 161/343 (46%), Gaps = 50/343 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 17 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 76
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D K+ E +W+ +
Sbjct: 77 GHKVAD---------YCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV----FTSC 123
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 124 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 183
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 184 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 242
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 243 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 298
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLR--RKAKGRS 400
GS DNIS+IV+DL+ RK K R+
Sbjct: 299 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKTRT 341
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 158/338 (46%), Gaps = 48/338 (14%)
Query: 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDI-------------VGGRTLHFFSVYDGHG 136
+P +G +SIQG M+DA +V F + I + T HFF VYDGHG
Sbjct: 2 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG 61
Query: 137 GSHVVPLNFQIIDYIYTSTHMHYLY------LTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
G V Y +H+ + D K+ E +W+ +
Sbjct: 62 GHKVAD---------YCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV----FTSC 108
Query: 191 FKRMD---QAALSTCALGCQPESMDLV---FLGSAALVALVSGDRVVVANCGDSRAVLCR 244
F +D + + +G + ++ V +GS A+VALV +VV+NCGDSRAVL R
Sbjct: 109 FLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 168
Query: 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQ 304
+P D KP R DE RI AGGK+I G RV+G+L MSRS+ GD LK +
Sbjct: 169 GKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSI-GDRYLKPYVIPE 227
Query: 305 PEISITEREGGDECLILASDGIWDVISDDLACRVASACL-----REGSAATAPRSRYSXX 359
PE++ R DECLILASDG+WDV+++ C +A + + G+ A R +
Sbjct: 228 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK---- 283
Query: 360 XXXXXXXXXXXXXXXXXXXXGSHDNISVIVVDLRRKAK 397
GS DNIS+IV+DL+ + K
Sbjct: 284 GIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK 321
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 38/264 (14%)
Query: 93 FGCISIQGLAESMDDAVSVKEEFFRPDIVG----GRTLHFFSVYDGHGGSHVVPLNFQII 148
+G S+QG M+DA + +VG FF+VYDGH GS V
Sbjct: 26 YGLSSMQGWRVEMEDAHTA--------VVGIPHGLEDWSFFAVYDGHAGSRVAN------ 71
Query: 149 DYIYTSTHMHYLYLTDTKTKQENEEVGGAEWE-DLVRVAIQKSFKRMDQAALSTCALGCQ 207
Y STH+ T+ + + E + V+ I+ F ++D+ + L
Sbjct: 72 ---YCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDL--- 125
Query: 208 PESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIR 267
MD GS A+ ++S + NCGDSRAVL R+G+ D KP P E ERI+
Sbjct: 126 RNGMDRS--GSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQ 183
Query: 268 AAGGKLIHQNGVRVYGILNMSRSLG--------GDNLLKRVTTSQPEISITEREGGDECL 319
AGG ++ Q RV G L +SR+LG G +++ + +PE+ R DE +
Sbjct: 184 NAGGSVMIQ---RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFI 240
Query: 320 ILASDGIWDVISDDLACRVASACL 343
ILA DGIWDV+S++ C + L
Sbjct: 241 ILAXDGIWDVMSNEELCEYVKSRL 264
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 118/255 (46%), Gaps = 38/255 (14%)
Query: 93 FGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIY 152
+G S+QG M+DA + P G + FF+VYDGH GS V Y
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV--IGLPS--GLESWSFFAVYDGHAGSQVAK---------Y 70
Query: 153 TSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQ--AALSTCALGCQPES 210
H+ L Q+ + GA + V+ I+ F +D+ +S G
Sbjct: 71 CCEHL----LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS- 125
Query: 211 MDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAG 270
GS A+ L+S NCGDSR +LCR+ + D KP P E ERI+ AG
Sbjct: 126 ------GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAG 179
Query: 271 GKLIHQNGVRVYGILNMSRSLG--------GDNLLKRVTTSQPEISITER-EGGDECLIL 321
G ++ Q RV G L +SR+LG G +++ + +PE+ ER E D+ +IL
Sbjct: 180 GSVMIQ---RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIIL 236
Query: 322 ASDGIWDVISDDLAC 336
A DGIWDV+ ++ C
Sbjct: 237 ACDGIWDVMGNEELC 251
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 118/255 (46%), Gaps = 38/255 (14%)
Query: 93 FGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIY 152
+G S+QG M+DA + P G + FF+VYDGH GS V Y
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV--IGLPS--GLESWSFFAVYDGHAGSQVAK---------Y 70
Query: 153 TSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQ--AALSTCALGCQPES 210
H+ L Q+ + GA + V+ I+ F +D+ +S G
Sbjct: 71 CCEHL----LDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRS- 125
Query: 211 MDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAG 270
GS A+ L+S NCGDSR +LCR+ + D KP P E ERI+ AG
Sbjct: 126 ------GSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAG 179
Query: 271 GKLIHQNGVRVYGILNMSRSLG--------GDNLLKRVTTSQPEISITER-EGGDECLIL 321
G ++ Q RV G L +SR+LG G +++ + +PE+ ER E D+ +IL
Sbjct: 180 GSVMIQ---RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIIL 236
Query: 322 ASDGIWDVISDDLAC 336
A DGIWDV+ ++ C
Sbjct: 237 ACDGIWDVMGNEELC 251
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 128 FFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAI 187
+F+VYDGHGG + THM + D K++N E L+ +A
Sbjct: 151 YFAVYDGHGGPAAAD---------FCHTHMEKCIM-DLLPKEKN-------LETLLTLA- 192
Query: 188 QKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALV-SGDRVVVANCGDSRAVLCRDG 246
F +D+A S L L+ G+ A VAL+ G +VVA+ GDSRA+LCR G
Sbjct: 193 ---FLEIDKAFSSHARLSADAT---LLTSGTTATVALLRDGIELVVASVGDSRAILCRKG 246
Query: 247 RPVPPLPDDKPQRPDELERIRAAGGKLIHQNGV---RVYGILNMSRSLGGDNLLKRVTTS 303
+P+ D P+R DE ERI+ GG + N + V G L M+RS+G +L +
Sbjct: 247 KPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIA 305
Query: 304 QPEIS-ITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATA 351
+PE I D L+L +DGI +++ C + C AA A
Sbjct: 306 EPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHA 354
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 30/229 (13%)
Query: 128 FFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAI 187
+F+VYDGHGG + THM + D K++N E L+ +A
Sbjct: 37 YFAVYDGHGGPAAAD---------FCHTHMEKCIM-DLLPKEKN-------LETLLTLA- 78
Query: 188 QKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALV-SGDRVVVANCGDSRAVLCRDG 246
F +D+A S L L+ G+ A VAL+ G +VVA+ GDSRA+LCR G
Sbjct: 79 ---FLEIDKAFSSHARLSADAT---LLTSGTTATVALLRDGIELVVASVGDSRAILCRKG 132
Query: 247 RPVPPLPDDKPQRPDELERIRAAGGKLIHQNGV---RVYGILNMSRSLGGDNLLKRVTTS 303
+P+ D P+R DE ERI+ GG + N + V G L M+RS+G +L +
Sbjct: 133 KPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIA 191
Query: 304 QPEIS-ITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATA 351
+PE I D L+L +DGI +++ C + C AA A
Sbjct: 192 EPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHA 240
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 123/265 (46%), Gaps = 33/265 (12%)
Query: 81 LPTPSSENPMPEF---GCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGG 137
L T S + EF G S+QG S +DA + F FF+VYDGHGG
Sbjct: 10 LTTKDSSDESNEFLASGSSSMQGWRISQEDAHNCILNF-------DDQCSFFAVYDGHGG 62
Query: 138 SHVVPLNFQIIDYIYTSTHM-HYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQ 196
+ V Y S H+ +L + ++E E+ + +Q+ +
Sbjct: 63 AEVAQ---------YCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIE-EL 112
Query: 197 AALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDK 256
LS + G E G A+VAL+ G + VAN GDSR V+CR+G+ + D K
Sbjct: 113 KVLSGDSAGSDAEPGKDS--GCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHK 170
Query: 257 PQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLG--GDNLLK------RVTTSQPEIS 308
P+ E +RI AGG++ RV G LN+SR++G G + K ++ ++ P+I
Sbjct: 171 PEDTVEYQRIEKAGGRVTLDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIE 228
Query: 309 ITEREGGDECLILASDGIWDVISDD 333
DE ++LA DGIW+ ++ +
Sbjct: 229 KITVGPEDEFMVLACDGIWNFMTSE 253
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 103/260 (39%), Gaps = 46/260 (17%)
Query: 118 PDIVGGRT-LHFFSVYDGHGGSH--------VVPLNFQIIDYIYTSTHMHYLYLTDTKTK 168
P +V GR FF V+DG G VVP Q+I L +D
Sbjct: 44 PQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVP---QLISSPAWQEVTEXLR-SDVPAT 99
Query: 169 QENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGD 228
+ +E++ L+ A+ +K D + C E ++ + S ++ A+++
Sbjct: 100 EVDEKL-----PQLLDQAVDDXYKNADNELVKXC------EQLNKDYASSTSVTAVLAKG 148
Query: 229 RVVVANCGDSR---AVLCRDGRPVPPLP-DDKPQRPDELERIRAAGGKL----IHQNGVR 280
V V + GDSR V +G L D KP P E RI GG + H N
Sbjct: 149 FVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPF 208
Query: 281 VYG--------------ILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGI 326
+ G L SR+ GG +L ++QP++ + ILA+DG+
Sbjct: 209 IRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGL 268
Query: 327 WDVISDDLACRVASACLREG 346
WDV S A +A +EG
Sbjct: 269 WDVXSAAQAVEIAXQARQEG 288
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 152 YTSTHMHYLYLTDTKTK-QENEEVGGAEWEDL-VRVAIQKSFKRMDQAALSTCALGCQPE 209
Y S LY +T QE ++ E D+ V+ A+ +FKR+D +G P
Sbjct: 128 YFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVG-DPN 186
Query: 210 S------MDLVFLGSAALVALVSGDRVVVANCGDSRAVLC---RDG--RPVPPLPDDKPQ 258
S + + F G+ A VA V G + VAN GDSRA+L DG V D Q
Sbjct: 187 SFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQ 246
Query: 259 RPDELERIRAAGGK-----LIHQNGVRVYGILNMSRSLG------GDNLLKRVT------ 301
E+ER++ K ++ Q+ R+ G+L R+ G +L KRV
Sbjct: 247 NEREVERLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQ 304
Query: 302 --------------------TSQPEISITEREGGDECLILASDGIWDVISDDLACRVASA 341
T++PE++ D+ L+LA+DG+W+ + R+
Sbjct: 305 LNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGE 364
Query: 342 CL 343
L
Sbjct: 365 YL 366
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 152 YTSTHMHYLYLTDTKTK-QENEEVGGAEWEDL-VRVAIQKSFKRMDQAALSTCALGCQPE 209
Y S LY +T QE ++ E D+ V+ A+ +FKR+D +G P
Sbjct: 128 YFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVG-DPN 186
Query: 210 S------MDLVFLGSAALVALVSGDRVVVANCGDSRAVLC---RDG--RPVPPLPDDKPQ 258
S + + F G+ A VA V G + VAN GDSRA+L DG V D Q
Sbjct: 187 SFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQ 246
Query: 259 RPDELERIRAAGGK-----LIHQNGVRVYGILNMSRSLG------GDNLLKRVT------ 301
EL+R++ K ++ Q+ R+ G+L R+ G +L KRV
Sbjct: 247 NERELQRLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQ 304
Query: 302 --------------------TSQPEISITEREGGDECLILASDGIWDVISDDLACRVASA 341
T++PE++ D+ L+LA+DG+W+ + R+
Sbjct: 305 LNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGE 364
Query: 342 CL 343
L
Sbjct: 365 YL 366
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 230 VVVANCGDSRAVLCR-DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMS 288
V N GDSRA L DG D KP P E RI AGG + + RV G+L +S
Sbjct: 175 VTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALS 234
Query: 289 RSLGGDNL 296
R+ G +
Sbjct: 235 RAFGDSDF 242
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 217 GSAALVALVSGDRVVVANCGDSRAVLCR---DGRPVPPLP-DDKPQRPDELERIRAAG-- 270
G+ A+VA++ +++ VAN G +RA+LC+ DG V L D + DEL R+ G
Sbjct: 148 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLD 207
Query: 271 -------GKLIHQNGVRVYGILNMSRSLGGDNLLKRVTT----SQPEISITE-REGGDEC 318
G + Q R G + +LL + ++PEI + +G
Sbjct: 208 AGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 267
Query: 319 LILASDGIWDVI 330
L+L S+G++ +
Sbjct: 268 LVLMSEGLYKAL 279
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 217 GSAALVALVSGDRVVVANCGDSRAVLCR---DGRPVPPLP-DDKPQRPDELERIRAAG-- 270
G+ A+VA++ +++ VAN G +RA+LC+ DG V L D + DEL R+ G
Sbjct: 167 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLD 226
Query: 271 -------GKLIHQNGVRVYGILNMSRSLGGDNLLKRVTT----SQPEISITE-REGGDEC 318
G + Q R G + +LL + ++PEI + +G
Sbjct: 227 AGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 286
Query: 319 LILASDGIWDVI 330
L+L S+G++ +
Sbjct: 287 LVLMSEGLYKAL 298
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%)
Query: 217 GSAALVALVSGDRVVVANCGDSRAVLCR---DGRPVPPLP-DDKPQRPDELERIRAAG-- 270
G+ A+VA++ +++ VAN G +RA+LC+ DG V L D + DEL R+ G
Sbjct: 165 GAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLD 224
Query: 271 -------GKLIHQNGVRVYGILNMSRSLGGDNLLKRVTT----SQPEISITE-REGGDEC 318
G + Q R G + +LL + ++PEI + +G
Sbjct: 225 AGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 284
Query: 319 LILASDGIWDVI 330
L+L S+G++ +
Sbjct: 285 LVLMSEGLYKAL 296
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 32/131 (24%)
Query: 212 DLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRP---------VPPLPDDKPQRPDE 262
DL +G+ L +G+R+ + + GDSR L RDG V L D+ P+E
Sbjct: 113 DLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEE 172
Query: 263 LERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILA 322
H + R + R+L G + +P +++ E GD L L
Sbjct: 173 -----------AHSHPQRSL----IMRALTGHEV-------EPTLTMREARAGDRYL-LC 209
Query: 323 SDGIWDVISDD 333
SDG+ D +SD+
Sbjct: 210 SDGLSDPVSDE 220
>pdb|2Q6D|A Chain A, Crystal Structure Of Infectious Bronchitis Virus (Ibv)
Main Protease
pdb|2Q6D|B Chain B, Crystal Structure Of Infectious Bronchitis Virus (Ibv)
Main Protease
pdb|2Q6D|C Chain C, Crystal Structure Of Infectious Bronchitis Virus (Ibv)
Main Protease
pdb|2Q6F|A Chain A, Crystal Structure Of Infectious Bronchitis Virus (Ibv)
Main Protease In Complex With A Michael Acceptor
Inhibitor N3
pdb|2Q6F|B Chain B, Crystal Structure Of Infectious Bronchitis Virus (Ibv)
Main Protease In Complex With A Michael Acceptor
Inhibitor N3
Length = 309
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 147 IIDYIYTSTHMHYLYLTDTKT--KQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCAL 204
I+ Y +++ L+L D+ + + G +W D++ +A F+ + Q ++ +
Sbjct: 19 IVSVSYRGNNLNGLWLGDSIYCPRHVLGKFSGDQWGDVLNLANNHEFEVVTQNGVTLNVV 78
Query: 205 GCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPL 252
+ + L+ L +A A + V ANCGDS + C G V L
Sbjct: 79 SRRLKGAVLI-LQTAVANAETPKYKFVKANCGDSFTIACSYGGTVIGL 125
>pdb|1TXO|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A.
pdb|1TXO|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
SerineTHREONINE PHOSPHATASE PSTPPPP AT 1.95 A
Length = 237
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 34/154 (22%)
Query: 191 FKRMDQAALS-TCALGCQPESM-DLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRP 248
++D A + A+ Q E DL G+ L +G+R+ + + GDSR L RDG
Sbjct: 67 LAKLDAAVRAGNSAIAAQVEXEPDLEGXGTTLTAILFAGNRLGLVHIGDSRGYLLRDGEL 126
Query: 249 ---------VPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
V L D+ P+E H + R + R+L G +
Sbjct: 127 TQITKDDTFVQTLVDEGRITPEE-----------AHSHPQRSL----IXRALTGHEV--- 168
Query: 300 VTTSQPEISITEREGGDECLILASDGIWDVISDD 333
+P ++ E GD L L SDG+ D +SD+
Sbjct: 169 ----EPTLTXREARAGDRYL-LCSDGLSDPVSDE 197
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 21/129 (16%)
Query: 216 LGSAALVALVSGDRVVVANCGDSRAVLCR----DGRPVPPLP-DDKPQRPDELERIRAAG 270
+GS+A++AL+ + + N G+ RA+LC+ D V L D +E R+ G
Sbjct: 153 VGSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLG 212
Query: 271 GKLIHQN--GVRVYGILNMSRSLGGD-----NLLKRVTTSQPEISITEREGGDEC----- 318
L+ QN GV +Y + LG N L T++P I E GG +
Sbjct: 213 --LMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFLSS-ATAEPVIFEPEIVGGIQITPACR 269
Query: 319 -LILASDGI 326
L+L S G+
Sbjct: 270 FLVLMSSGL 278
>pdb|2IMN|A Chain A, Refined Crystal Structure Of A Recombinant Immunoglobulin
Domain And A Complementarity-Determining Region
1-Grafted Mutant
Length = 113
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 212 DLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDEL 263
D+V S + +++ +G+RV ++ C S+++L +DG+ KP +P +L
Sbjct: 1 DIVMTQSPSSLSVSAGERVTMS-CKSSQSLLYKDGKNFLAWYQQKPGQPPKL 51
>pdb|2KQR|A Chain A, Solution Structure Of The N-Terminal Domain (Residues
1-111) Of Brugia Malayi Asparaginyl-Trna Synthetase
Length = 113
Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Query: 133 DGHGGSHVVPLN--FQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKS 190
DG+ GS + PL +Q + I S+ +L +TK++ ++V WE + A++KS
Sbjct: 14 DGNDGSELKPLRTLYQAM-IITKSSKGDFL----IRTKKDGKQV----WEAASKTALKKS 64
Query: 191 FKRMDQAAL 199
+KR +Q L
Sbjct: 65 WKRYEQEML 73
>pdb|3HUU|A Chain A, Crystal Structure Of Transcription Regulator Like Protein
From Staphylococcus Haemolyticus
pdb|3HUU|B Chain B, Crystal Structure Of Transcription Regulator Like Protein
From Staphylococcus Haemolyticus
pdb|3HUU|C Chain C, Crystal Structure Of Transcription Regulator Like Protein
From Staphylococcus Haemolyticus
pdb|3HUU|D Chain D, Crystal Structure Of Transcription Regulator Like Protein
From Staphylococcus Haemolyticus
Length = 305
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 114 EFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDT--KTKQEN 171
EF P ++ G++L++ ++ H + + +Q+ Y+Y H H L+L ++ E+
Sbjct: 104 EFKVPYLIVGKSLNYENII--HIDNDNIDAAYQLTQYLYHLGHRHILFLQESGHYAVTED 161
Query: 172 EEVGGAEWEDLVRVA 186
VG ++ D V+++
Sbjct: 162 RSVGFKQYCDDVKIS 176
>pdb|3OVB|A Chain A, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
pdb|3OVB|B Chain B, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
Length = 441
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 241 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 296
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 297 LERASRKIFEFLEREN 312
>pdb|3OVS|A Chain A, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
pdb|3OVS|B Chain B, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
Length = 441
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 241 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 296
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 297 LERASRKIFEFLEREN 312
>pdb|3OUY|A Chain A, How The Cca-Adding Enzyme Selects Adenine Over Cytosine At
Position 76 Of Trna
pdb|3OV7|A Chain A, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
pdb|3OV7|B Chain B, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
Length = 441
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 241 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 296
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 297 LERASRKIFEFLEREN 312
>pdb|3OVA|A Chain A, How The Cca-Adding Enzyme Selects Adenine Over Cytosine In
Position 76 Of Trna
Length = 435
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 239 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 294
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 295 LERASRKIFEFLEREN 310
>pdb|2ZH7|A Chain A, Complex Structure Of Afcca With Trnaminidg
pdb|2ZHB|A Chain A, Complex Structure Of Afcca With Trnaminiduc
Length = 436
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 240 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 295
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 296 LERASRKIFEFLEREN 311
>pdb|1UET|A Chain A, Divergent Evolutions Of Trinucleotide Polymerization
Revealed By An Archaeal Cca-Adding Enzyme Structure
pdb|1UEU|A Chain A, Divergent Evolutions Of Trinucleotide Polymerization
Revealed By An Archaeal Cca-Adding Enzyme Structure
pdb|1UEV|A Chain A, Divergent Evolutions Of Trinucleotide Polymerization
Revealed By An Archaeal Cca-Adding Enzyme Structure
pdb|1R89|A Chain A, Crystal Structures Of An Archaeal Class I Cca-Adding
Enzyme And Its Nucleotide Complexes
pdb|1R8A|A Chain A, Crystal Structures Of An Archaeal Class I Cca-Adding
Enzyme And Its Nucleotide Complexes
pdb|1R8B|A Chain A, Crystal Structures Of An Archaeal Class I Cca-Adding
Enzyme And Its Nucleotide
pdb|1R8C|A Chain A, Crystal Structures Of An Archaeal Class I Cca-Adding
Enzyme And Its Nucleotide
pdb|1SZ1|A Chain A, Mechanism Of Cca-Adding Enzymes Specificity Revealed By
Crystal Structures Of Ternary Complexes
pdb|1SZ1|B Chain B, Mechanism Of Cca-Adding Enzymes Specificity Revealed By
Crystal Structures Of Ternary Complexes
pdb|1TFW|A Chain A, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFW|B Chain B, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFW|C Chain C, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFW|D Chain D, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFY|A Chain A, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFY|B Chain B, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFY|C Chain C, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|1TFY|D Chain D, How Cca Is Added To The 3' End Of Immature Trna Without
The Use Of An Oligonucleotide Template
pdb|2DR5|A Chain A, Complex Structure Of Cca Adding Enzyme With Mini-Helix
Lacking Cca
pdb|2DR7|A Chain A, Complex Structure Of Cca-Adding Enzyme With Trnaminidc
pdb|2DR8|A Chain A, Complex Structure Of Cca-Adding Enzyme With Trnaminidc And
Ctp
pdb|2DR9|A Chain A, Complex Structure Of Cca-adding Enzyme With Trnaminidcc
pdb|2DRA|A Chain A, Complex Structure Of Cca-Adding Enzyme With Trnaminidcc
And Atp
pdb|2DRB|A Chain A, Complex Structure Of Cca-Adding Enzyme With Trnaminicca
pdb|2DVI|A Chain A, Complex Structure Of Cca-Adding Enzyme, Mini-Dcc And Ctp
pdb|2ZH1|A Chain A, Complex Structure Of Afcca With Trnaminida
pdb|2ZH2|A Chain A, Complex Structure Of Afcca With Trnaminidac
pdb|2ZH3|A Chain A, Complex Structure Of Afcca With Trnaminidca
pdb|2ZH4|A Chain A, Complex Structure Of Afcca With Trnaminidcg
pdb|2ZH5|A Chain A, Complex Structure Of Afcca With Trnaminidcu
pdb|2ZH6|A Chain A, Complex Structure Of Afcca With Trnaminidcu And Atp
pdb|2ZH8|A Chain A, Complex Structure Of Afcca With Trnaminidgc
pdb|2ZH9|A Chain A, Complex Structure Of Afcca With Trnaminidu
pdb|2ZHA|A Chain A, Complex Structure Of Afcca With Trnaminidu And Ctp
pdb|3OUY|B Chain B, How The Cca-Adding Enzyme Selects Adenine Over Cytosine At
Position 76 Of Trna
Length = 437
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 242 LCRDGRPVPPLPDDKPQRPDEL--ERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR 299
LCR+ P L KP+ P E+ ER+R K++ + G V+ + + DNL +
Sbjct: 241 LCREFMEAPSLGFFKPKHPLEIEPERLR----KIVEERGTAVFAVKFRKPDIVDDNLYPQ 296
Query: 300 VTTSQPEI-SITEREG 314
+ + +I ERE
Sbjct: 297 LERASRKIFEFLEREN 312
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,417,478
Number of Sequences: 62578
Number of extensions: 456233
Number of successful extensions: 1084
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1000
Number of HSP's gapped (non-prelim): 50
length of query: 400
length of database: 14,973,337
effective HSP length: 101
effective length of query: 299
effective length of database: 8,652,959
effective search space: 2587234741
effective search space used: 2587234741
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)