Query 035835
Match_columns 400
No_of_seqs 192 out of 1484
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 06:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035835.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035835hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 6.7E-52 1.5E-56 379.6 23.1 273 82-396 13-294 (379)
2 KOG0698 Serine/threonine prote 100.0 1E-49 2.2E-54 392.0 28.9 263 92-397 41-308 (330)
3 PLN03145 Protein phosphatase 2 100.0 3.1E-49 6.7E-54 391.2 28.4 261 89-396 63-333 (365)
4 PTZ00224 protein phosphatase 2 100.0 1.1E-45 2.4E-50 367.1 28.4 252 81-396 12-274 (381)
5 PF00481 PP2C: Protein phospha 100.0 7.9E-47 1.7E-51 359.2 18.0 248 92-385 1-254 (254)
6 KOG0699 Serine/threonine prote 100.0 1.8E-41 3.9E-46 320.6 18.6 163 214-395 328-505 (542)
7 COG0631 PTC1 Serine/threonine 100.0 5.4E-41 1.2E-45 320.1 20.9 248 89-396 6-255 (262)
8 KOG0700 Protein phosphatase 2C 100.0 2.4E-38 5.3E-43 306.4 18.8 240 106-381 86-379 (390)
9 cd00143 PP2Cc Serine/threonine 100.0 8.6E-37 1.9E-41 287.7 27.6 252 92-392 2-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 2.1E-36 4.5E-41 286.0 27.7 250 90-390 5-255 (255)
11 PRK14559 putative protein seri 100.0 7.3E-37 1.6E-41 319.9 25.1 259 90-397 374-639 (645)
12 KOG1323 Serine/threonine phosp 100.0 2.9E-29 6.2E-34 235.8 22.2 250 122-395 140-489 (493)
13 KOG0618 Serine/threonine phosp 99.9 4.8E-24 1E-28 223.5 15.3 248 89-397 520-776 (1081)
14 KOG1379 Serine/threonine prote 99.9 4.8E-21 1E-25 180.6 19.2 211 106-391 92-329 (330)
15 PF13672 PP2C_2: Protein phosp 99.8 9.8E-19 2.1E-23 161.3 12.0 189 96-344 3-196 (212)
16 smart00331 PP2C_SIG Sigma fact 99.7 7.2E-16 1.6E-20 140.1 17.5 173 105-377 17-192 (193)
17 TIGR02865 spore_II_E stage II 99.5 8.9E-13 1.9E-17 142.9 18.3 192 100-392 562-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.3 8.5E-11 1.8E-15 106.4 17.4 177 125-393 3-193 (193)
19 COG2208 RsbU Serine phosphatas 97.7 0.0025 5.4E-08 64.0 18.5 122 217-393 232-366 (367)
20 PF01436 NHL: NHL repeat; Int 25.6 1.5E+02 0.0033 17.6 3.7 21 223-243 8-28 (28)
21 PF09436 DUF2016: Domain of un 21.9 53 0.0012 25.0 1.3 17 314-331 26-42 (72)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-52 Score=379.56 Aligned_cols=273 Identities=32% Similarity=0.505 Sum_probs=238.1
Q ss_pred CCCCCCCCCCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhh
Q 035835 82 PTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLY 161 (400)
Q Consensus 82 ~~~~~~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l 161 (400)
....-+.+.++||+.|+||||-+|||++.....+-.+. .+|+||+|||||.|+++|.+ |++++.+.+
T Consensus 13 hn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l----~dWSfFAVfDGHAGs~va~~---------c~~hLlehi 79 (379)
T KOG0697|consen 13 HNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPL----EDWSFFAVFDGHAGSQVANH---------CAEHLLEHI 79 (379)
T ss_pred ccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCc----cCceEEEEEcCccchHHHHH---------HHHHHHHHh
Confidence 33445778999999999999999999998876554333 78899999999999999999 999999988
Q ss_pred cchhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEE
Q 035835 162 LTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAV 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~ 241 (400)
..+++|...... ..-+.++.-++.+|.++|+-+.....-. ....++|||++.+++.+.++|++|||||||+
T Consensus 80 ~sse~F~~~~k~----gsv~~~~~GIrtGFL~iDE~mr~~~~~~-----~~~drsGsTAVcv~vsp~h~y~~NcGDSRav 150 (379)
T KOG0697|consen 80 ISSEEFRGMTKN----GSVENVEKGIRTGFLSIDEIMRTLSDIS-----KGSDRSGSTAVCVFVSPTHIYIINCGDSRAV 150 (379)
T ss_pred hhhHHHhhhccC----CcHHHHHhhHhhcceeHHHHHhhhhhhh-----cccccCCceEEEEEecCceEEEEecCcchhh
Confidence 877888763321 2456778999999999999887664322 1234579999999999999999999999999
Q ss_pred EEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCccc---------ccccCCCeeEEEEe
Q 035835 242 LCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLK---------RVTTSQPEISITER 312 (400)
Q Consensus 242 l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k---------~~v~~eP~v~~~~l 312 (400)
|+|+|..+.-|.||+|.+|.|++||+.+||.|.. .|++|.|++||||| |+.+| +.|+++|++....+
T Consensus 151 l~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI---qRvNGsLAVSRAlG-DydyK~v~~kgp~eQlVSPEPev~~~~R 226 (379)
T KOG0697|consen 151 LCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI---QRVNGSLAVSRALG-DYDYKNVPGKGPTEQLVSPEPEVYIIER 226 (379)
T ss_pred eecCCceEEeccCCCCCChHHHHHHhcCCCeEEE---EEecceeeeehhcc-CcccccCCCCCchhcccCCCCceEEeec
Confidence 9999999999999999999999999999998864 59999999999999 99888 46999999999999
Q ss_pred eCCCeEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEc
Q 035835 313 EGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDL 392 (400)
Q Consensus 313 ~~~d~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l 392 (400)
...|+|||||+|||||+|+++|+|++++..+.-. ++...+|..+++.++-+||.||+|+|||-|
T Consensus 227 ~eedeFivlACDGIwDVMtneelcefv~sRl~Vt----------------~dL~~vcn~VvDtCLhKGSRDNMsivlvcf 290 (379)
T KOG0697|consen 227 SEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVT----------------SDLEEVCNDVVDTCLHKGSRDNMSIVLVCF 290 (379)
T ss_pred cccCcEEEEEccchhhhcccHHHHHHHHhhheec----------------ccHHHHHHHHHHHHHhccCccCceEEEEec
Confidence 9999999999999999999999999999987432 247889999999999999999999999999
Q ss_pred ccCC
Q 035835 393 RRKA 396 (400)
Q Consensus 393 ~~~~ 396 (400)
..-+
T Consensus 291 p~AP 294 (379)
T KOG0697|consen 291 PGAP 294 (379)
T ss_pred CCCC
Confidence 7544
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-49 Score=392.00 Aligned_cols=263 Identities=40% Similarity=0.562 Sum_probs=225.2
Q ss_pred eEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhh
Q 035835 92 EFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQEN 171 (400)
Q Consensus 92 ~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~ 171 (400)
..+.++.+|+|+.|||++.....+............||||||||||..+|+| |.++++..+. +......
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~---------~~~~L~~~l~--~~~~~~~ 109 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKF---------AAKHLHKNLL--EQLAFPK 109 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHH---------HHHHHHHHHH--hhhhccc
Confidence 3555699999999999999888765333222336899999999999999999 9999999998 4443311
Q ss_pred hhcCCcchHHHHHHHHHHHHH-HHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCC-eEEEEEcCCceEEEEeCC-cc
Q 035835 172 EEVGGAEWEDLVRVAIQKSFK-RMDQAALSTCALGCQPESMDLVFLGSAALVALVSGD-RVVVANCGDSRAVLCRDG-RP 248 (400)
Q Consensus 172 ~~~~~~~~~~~i~~~l~~af~-~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~-~l~vanvGDSRa~l~r~g-~~ 248 (400)
. ...++.+++++|. .+|.++... ......+|||++++++..+ +|||||+|||||+|++.| ++
T Consensus 110 ------~-~~~~~~a~~~~F~~~~D~~~~~~--------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a 174 (330)
T KOG0698|consen 110 ------D-RQDVKDALRRAFLTKTDSEFLEK--------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVA 174 (330)
T ss_pred ------c-hHHHHHHHHHHHHHHHHHHHHhh--------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCee
Confidence 0 0456999999999 699999876 1113456999999999855 999999999999999765 89
Q ss_pred cCCCCCCCCCChhHHHHHHHhCCeEEecCC-ceeecceecccccCCCCccc-ccccCCCeeEEEEeeCCCeEEEEEcCCC
Q 035835 249 VPPLPDDKPQRPDELERIRAAGGKLIHQNG-VRVYGILNMSRSLGGDNLLK-RVTTSQPEISITEREGGDECLILASDGI 326 (400)
Q Consensus 249 ~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~-~rv~g~l~vsRalG~d~~~k-~~v~~eP~v~~~~l~~~d~~LILaSDGl 326 (400)
++||.||+|++++|+.||+++||+|..+.+ .|++|.|++||+|| |..+| ++|+++|++....+++.|+|||||||||
T Consensus 175 ~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~G-D~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGi 253 (330)
T KOG0698|consen 175 VQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFG-DVELKSQGVIAEPEIQQVKINSDDEFLILASDGI 253 (330)
T ss_pred eeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecC-CHHhcCCcEecCCceEEEEcCCCCcEEEEeCCch
Confidence 999999999999999999999999998886 89999999999999 99999 9999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCCC
Q 035835 327 WDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAK 397 (400)
Q Consensus 327 wd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~~ 397 (400)
||+|+++|++++++.++... ..+..++..|.+.|+.+++.||||||||.|.++.+
T Consensus 254 wDv~s~qeav~~V~~~~~~~----------------~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 254 WDVVSNQEAVDLVRDELASI----------------SSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPK 308 (330)
T ss_pred hcccChHHHHHHHHHHhhcc----------------ccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCccc
Confidence 99999999999999987211 13678889999999999999999999999998754
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3.1e-49 Score=391.21 Aligned_cols=261 Identities=33% Similarity=0.507 Sum_probs=218.0
Q ss_pred CCCeEEEEecccCCcCCccceeeecccccCC---CCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchh
Q 035835 89 PMPEFGCISIQGLAESMDDAVSVKEEFFRPD---IVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDT 165 (400)
Q Consensus 89 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~---~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~ 165 (400)
..+++|.+|++|.|.+|||++++..++.... ........||||||||||+.+|++ ++++++..+..+.
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~---------as~~l~~~i~~~~ 133 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADF---------ACYHLPRFIVEDE 133 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHH---------HHHHHHHHHHhhh
Confidence 4578899999999999999998766542110 011234689999999999999999 8888887776211
Q ss_pred hhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeC
Q 035835 166 KTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRD 245 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~ 245 (400)
.+...+.++|.++|..+++++....... ....+|||+++++|.++++||+||||||||++++
T Consensus 134 ------------~~~~~~~~al~~af~~~d~~~~~~~~~~------~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~ 195 (365)
T PLN03145 134 ------------DFPREIEKVVSSAFLQTDTAFAEACSLD------ASLASGTTALAALVVGRSLVVANAGDCRAVLCRR 195 (365)
T ss_pred ------------ccchhHHHHHHHHHHHHhHHHHhhhccc------cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcC
Confidence 2233567889999999999987653211 1233699999999999999999999999999999
Q ss_pred CcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccc-------cccCCCeeEEEEeeCCCeE
Q 035835 246 GRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR-------VTTSQPEISITEREGGDEC 318 (400)
Q Consensus 246 g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~-------~v~~eP~v~~~~l~~~d~~ 318 (400)
|++++||.||++.++.|++||++.||.|. ..+++|.+++||+|| |..+|. .++++|++..++++++|+|
T Consensus 196 g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~---~g~v~g~l~vTRalG-D~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~f 271 (365)
T PLN03145 196 GKAIEMSRDHKPMCSKERKRIEASGGYVY---DGYLNGQLNVARALG-DWHMEGMKGSDGGPLSAEPELMTTQLTEEDEF 271 (365)
T ss_pred CeEEEecCCCCCCCHHHHHHHHHcCCcee---cceECCccccccccc-cccccccccccCCCcceEEEEEEEECCCCCEE
Confidence 99999999999999999999999999884 358889999999999 887753 4789999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCC
Q 035835 319 LILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKA 396 (400)
Q Consensus 319 LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~ 396 (400)
||||||||||+|+++++++++++.+.... ++..+|+.|++.|+.+++.||||||||.|+...
T Consensus 272 LILaSDGLwdvls~ee~v~~i~~~l~~~~----------------~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~ 333 (365)
T PLN03145 272 LIIGCDGIWDVFRSQNAVDFARRRLQEHN----------------DPVMCSKELVDEALKRKSGDNLAVVVVCFQSQP 333 (365)
T ss_pred EEEeCCccccCcCHHHHHHHHHHHHhcCC----------------CHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCC
Confidence 99999999999999999999988774422 367899999999999999999999999998753
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.1e-45 Score=367.13 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=208.8
Q ss_pred CCCCCCCCCCCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHh
Q 035835 81 LPTPSSENPMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYL 160 (400)
Q Consensus 81 ~~~~~~~~~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~ 160 (400)
..+....+..+.+|+.+++|+|++|||++++... ....+|||||||||..++++ +.+.++..
T Consensus 12 ~~~~~~~~~~~~~g~~s~~G~R~~nED~~~v~~~---------~~~~lfgVfDGHgG~~~S~~---------~~~~l~~~ 73 (381)
T PTZ00224 12 KLVDRAGNSIFRCASACVNGYRESMEDAHLLYLT---------DDWGFFGVFDGHVNDECSQY---------LARAWPQA 73 (381)
T ss_pred cccccCCCccEEEEEEeCCCCCCCCCCeeEeccC---------CCceEEEEEeCCCcHHHHHH---------HHHHHHHH
Confidence 3444457788999999999999999999876432 23479999999999999999 88888876
Q ss_pred hcchhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEe-CCeEEEEEcCCce
Q 035835 161 YLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVS-GDRVVVANCGDSR 239 (400)
Q Consensus 161 l~~~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~-~~~l~vanvGDSR 239 (400)
+. ..... . ..+.|..+|..+|+++..... .+|||+++++|. +.++||+||||||
T Consensus 74 l~--~~~~~--------~----~~~~l~~a~~~~d~~i~~~~~-----------~~GsTatv~lI~~~~~l~vaNVGDSR 128 (381)
T PTZ00224 74 LE--KEPEP--------M----TDERMEELCLEIDEEWMDSGR-----------EGGSTGTFCVIMKDVHLQVGNVGDSR 128 (381)
T ss_pred HH--hcccc--------c----cHHHHHHHHHHHHHHHHhccc-----------CCCCeEEEEEEEECCEEEEEEcccce
Confidence 64 11100 0 134588899999999875421 249999998886 5799999999999
Q ss_pred EEEEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcc---------cccccCCCeeEEE
Q 035835 240 AVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLL---------KRVTTSQPEISIT 310 (400)
Q Consensus 240 a~l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~---------k~~v~~eP~v~~~ 310 (400)
||++|+|++++||+||++.++.|+.||.+.||.+. ..|++|.+++||+|| |..+ ++.|+++|++..+
T Consensus 129 ayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~---~~Rv~G~l~vTRalG-d~~~K~~~~~~~~~~~v~~~Pdi~~~ 204 (381)
T PTZ00224 129 VLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV---SNRVDGDLAVSRAFG-DRSFKVKGTGDYLEQKVIAVPDVTHL 204 (381)
T ss_pred EEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec---cccccCceeeecccC-CcccccccccccccCcceeeeEEEEE
Confidence 99999999999999999999999999999999874 358899999999999 7653 3457899999999
Q ss_pred EeeCCCeEEEEEcCCCCC-CCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEE
Q 035835 311 EREGGDECLILASDGIWD-VISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIV 389 (400)
Q Consensus 311 ~l~~~d~~LILaSDGlwd-~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVV 389 (400)
.+.++| ||||||||||| +++++++.+++++.+.... ++..+|+.|+++|+.+|+.|||||||
T Consensus 205 ~l~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~----------------~~~~aA~~Lv~~A~~rGs~DNITvIv 267 (381)
T PTZ00224 205 TCQSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCD----------------DLAVVAGRVCDEAIRRGSKDNISCLI 267 (381)
T ss_pred ECCCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCC----------------CHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 999887 99999999999 7999999999987653221 36789999999999999999999999
Q ss_pred EEcccCC
Q 035835 390 VDLRRKA 396 (400)
Q Consensus 390 v~l~~~~ 396 (400)
|+|....
T Consensus 268 V~~~~~~ 274 (381)
T PTZ00224 268 VQLKDGA 274 (381)
T ss_pred EEeeCCC
Confidence 9998653
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=7.9e-47 Score=359.21 Aligned_cols=248 Identities=38% Similarity=0.589 Sum_probs=203.9
Q ss_pred eEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhh
Q 035835 92 EFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQEN 171 (400)
Q Consensus 92 ~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~ 171 (400)
.+|+.+.+|+|.+|||++++..++... .......+|||||||||..++++ ++..++..+. ..+...
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~--~~~~~~~l~~V~DGhgG~~~a~~---------~~~~l~~~l~--~~~~~~- 66 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN--SGNDNVSLFGVFDGHGGSEAAEY---------ASQNLPEFLK--ENLSFN- 66 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC--TTEEEEEEEEEEEEESSSHHHHH---------HHHHHHHHHH--HHHHHH-
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc--CCCCCcEEEEEecCCCChhhHHH---------HHHHHHHHHH--hhcccc-
Confidence 479999999999999999998876422 23367899999999999999999 8988887776 333321
Q ss_pred hhcCCcchHHHHHHHHHHHHHH-HHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCccc-
Q 035835 172 EEVGGAEWEDLVRVAIQKSFKR-MDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPV- 249 (400)
Q Consensus 172 ~~~~~~~~~~~i~~~l~~af~~-~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~~~- 249 (400)
....+.++|..+|.. +++.+...... . ....+|||+++++|.+++||+||||||||||++++...
T Consensus 67 -------~~~~~~~al~~a~~~~~~~~~~~~~~~-----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~ 133 (254)
T PF00481_consen 67 -------DGNDIEEALRQAFLAFTDESLYSDSEN-----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIK 133 (254)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHHHHH-----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEE
T ss_pred -------cccchhhcccceeeecccccccccccc-----c-ccccccccccccccccceeEEEeeeeeeeeeeecccccc
Confidence 111568999999999 88888773221 1 24556999999999999999999999999999999888
Q ss_pred CCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccc----cccCCCeeEEEEeeCCCeEEEEEcCC
Q 035835 250 PPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKR----VTTSQPEISITEREGGDECLILASDG 325 (400)
Q Consensus 250 ~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~----~v~~eP~v~~~~l~~~d~~LILaSDG 325 (400)
+||.||++.+++|+.||+++||.+.. ..|+.|.+++||+|| |..+|+ +|+++|++..++++++|+||||||||
T Consensus 134 ~Lt~dH~~~~~~E~~RI~~~gg~v~~--~~rv~g~l~~sRalG-d~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDG 210 (254)
T PF00481_consen 134 QLTRDHKPSNPDERERIRKAGGRVSE--NGRVNGVLAVSRALG-DFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDG 210 (254)
T ss_dssp ESS---STTSHHHHHHHHHTT-GEEE--TEEETTTBSSSB-EE--GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HH
T ss_pred ccccccccchhhccceeecccccccc--chhhhhccccccccc-cccccccccceeeeecccccccccccceEEEEEccc
Confidence 99999999999999999999999876 789999999999999 999998 99999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCe
Q 035835 326 IWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNI 385 (400)
Q Consensus 326 lwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNi 385 (400)
|||+|+++|+++++++...... .+..+|+.|+++|+.+|+.|||
T Consensus 211 lwd~l~~~ei~~~v~~~~~~~~----------------~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 211 LWDVLSNEEIVDIVRESLNSGR----------------SPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHTTSHHHHHHHHHHHHHHHHS----------------HHHHHHHHHHHHHHHTTHHSHE
T ss_pred ccccCCHHHHHHHHHHHHhcCC----------------cHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999874311 3789999999999999999997
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=320.57 Aligned_cols=163 Identities=38% Similarity=0.600 Sum_probs=149.7
Q ss_pred ccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCC
Q 035835 214 VFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGG 293 (400)
Q Consensus 214 ~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~ 293 (400)
..+|||++||+|.+++|||||.|||||+|+|+|+++.|+.||+|....|..||.++||+|.- ..||+|+|+++|+||
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~G- 404 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAFG- 404 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhhh-
Confidence 45899999999999999999999999999999999999999999999999999999999863 479999999999999
Q ss_pred CCccc---------ccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchh
Q 035835 294 DNLLK---------RVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRR 364 (400)
Q Consensus 294 d~~~k---------~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (400)
|..+| ++|++-|+|.+..|++.|+|+|||+||||++|+.++++++++..+..+..
T Consensus 405 DHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~---------------- 468 (542)
T KOG0699|consen 405 DHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSS---------------- 468 (542)
T ss_pred hhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCch----------------
Confidence 88776 46999999999999999999999999999999999999999999876543
Q ss_pred HHHHHHHHHHHHHhc------CCCCCeEEEEEEcccC
Q 035835 365 HDAAAAILCRLALAR------GSHDNISVIVVDLRRK 395 (400)
Q Consensus 365 ~~~~A~~L~~~A~~r------gs~DNiTvVVv~l~~~ 395 (400)
...+++.|.+.+++- -+.||+|||++.|+++
T Consensus 469 ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 469 LSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 678999999999973 2569999999999865
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-41 Score=320.07 Aligned_cols=248 Identities=29% Similarity=0.367 Sum_probs=195.6
Q ss_pred CCCeEEEEecccC-CcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhh
Q 035835 89 PMPEFGCISIQGL-AESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKT 167 (400)
Q Consensus 89 ~~~~~g~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~ 167 (400)
..+.++..|..|. |.+|||++.+..+. .+.. ..||+|||||||+.++++ |++.++..|. +.+
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~-----~~~~-~~l~~V~DG~GGh~~ge~---------aS~~~v~~l~--~~~ 68 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNE-----NGNL-LLLFAVADGMGGHAAGEV---------ASKLAVEALA--RLF 68 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeecccc-----CCcc-eeEEEEEeCccchhHHHH---------HHHHHHHHHH--HHH
Confidence 3456777788877 77799999987732 1223 579999999999999999 5555555555 443
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCc
Q 035835 168 KQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGR 247 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~ 247 (400)
..... ....+.+.+.+.+++..+++.+....... .....+|||++++++.++++|+||||||||||+|+|.
T Consensus 69 ~~~~~----~~~~~~~~~~l~~~~~~~n~~i~~~~~~~-----~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~ 139 (262)
T COG0631 69 DETNF----NSLNESLEELLKEAILKANEAIAEEGQLN-----EDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE 139 (262)
T ss_pred Hhccc----cccchhHHHHHHHHHHHHHHHHHHhhhcc-----cccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc
Confidence 33110 01111158899999999999998885422 3345669999999999999999999999999999999
Q ss_pred ccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecc-eecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCC
Q 035835 248 PVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGI-LNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGI 326 (400)
Q Consensus 248 ~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~-l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGl 326 (400)
+++||.||++.+..+..++...++ ++..+. +++||||| +... .+|++...+++++| |||||||||
T Consensus 140 ~~~lT~DH~~~~~~~~~~~~~~~~-------~~~~~~~~~ltralG-~~~~-----~~p~~~~~~~~~~d-~llL~SDGl 205 (262)
T COG0631 140 LKQLTEDHSLVNRLEQRGIITPEE-------ARSHPRRNALTRALG-DFDL-----LEPDITELELEPGD-FLLLCSDGL 205 (262)
T ss_pred eEEeccCCcHHHHHHHhcCCCHHH-------HHhCccchhhhhhcC-CCcc-----cceeEEEEEcCCCC-EEEEECCCC
Confidence 999999999987777777544443 222222 47999999 6663 28999999999995 999999999
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCC
Q 035835 327 WDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKA 396 (400)
Q Consensus 327 wd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~ 396 (400)
||.++++++.++++.. ..+..+++.|++.|+.+++.||+|+|||++..+.
T Consensus 206 ~d~v~~~~i~~il~~~--------------------~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 206 WDVVSDDEIVDILKNS--------------------ETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred ccCcCHHHHHHHHhcC--------------------CCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 9999999999999861 1478999999999999999999999999998765
No 8
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=306.44 Aligned_cols=240 Identities=31% Similarity=0.455 Sum_probs=189.0
Q ss_pred ccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhh--------------
Q 035835 106 DDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQEN-------------- 171 (400)
Q Consensus 106 EDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~-------------- 171 (400)
||++.+.... ...+.|+||||||||..++++ +.+++..++. .++....
T Consensus 86 edrv~~~~s~-------~~~~~fvGIyDGhgGp~as~~---------v~~~L~~~v~--~~L~~~~~~~~~~f~~e~~~~ 147 (390)
T KOG0700|consen 86 EDRVSVAVSE-------ENGWLFVGIYDGHGGPDASRF---------LSDHLYPYVA--RELQGLLWQDEERFPSEYKSE 147 (390)
T ss_pred cCcceeeeec-------cCCeEEEEEecCCCCccHHHH---------HHHHHHHHHH--HHhhhhhhhhccccccccccc
Confidence 6776654431 267799999999999999999 5555554443 2222100
Q ss_pred ---------hhc-CCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEE
Q 035835 172 ---------EEV-GGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAV 241 (400)
Q Consensus 172 ---------~~~-~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~ 241 (400)
.+. ........+.++|.+||.++++++....... -...++...+||||+|+++.+..+||||+|||||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~-~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAV 226 (390)
T KOG0700|consen 148 ELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQ-LQENPELALVGSCCLVGLIKGGDLYVANVGDSRAV 226 (390)
T ss_pred hhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHh-hccchhhhhhcceEEEEEEeCCeEEEEecCcchhh
Confidence 000 0011256789999999999999998765433 23445678899999999999999999999999999
Q ss_pred EEe---CC---cccCCCCCCCCCChhHHHHHHHhCC---eEEecCCceeecceecccccCCCCccc--------------
Q 035835 242 LCR---DG---RPVPPLPDDKPQRPDELERIRAAGG---KLIHQNGVRVYGILNMSRSLGGDNLLK-------------- 298 (400)
Q Consensus 242 l~r---~g---~~~~LT~dH~~~~~~E~~ri~~~Gg---~v~~~~~~rv~g~l~vsRalG~d~~~k-------------- 298 (400)
|.+ +| .++|||.||+.++.+|+.||+..+. .++..++.|++|.+.+||||| |.++|
T Consensus 227 LG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfG-d~~lK~~~~n~e~l~~~fr 305 (390)
T KOG0700|consen 227 LGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFG-DGYLKWPEFNQEPLLEKFR 305 (390)
T ss_pred hceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeecc-ceeecchhhccchhHhhcC
Confidence 974 33 5789999999999999999999985 344445589999999999999 88887
Q ss_pred -------ccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHH
Q 035835 299 -------RVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAI 371 (400)
Q Consensus 299 -------~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 371 (400)
||++|+|++++++|++.|+||||||||||++|+|+|++.++...+.+..+ -..+|+.
T Consensus 306 ~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~p----------------d~~~A~h 369 (390)
T KOG0700|consen 306 IPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFP----------------DGNPATH 369 (390)
T ss_pred CCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCC----------------CCCHHHH
Confidence 68999999999999999999999999999999999999999997743211 1367889
Q ss_pred HHHHHHhcCC
Q 035835 372 LCRLALARGS 381 (400)
Q Consensus 372 L~~~A~~rgs 381 (400)
|++.|+.+..
T Consensus 370 LIr~aL~~aa 379 (390)
T KOG0700|consen 370 LIRHALGRAA 379 (390)
T ss_pred HHHHHHhhhh
Confidence 9999987643
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=8.6e-37 Score=287.74 Aligned_cols=252 Identities=38% Similarity=0.558 Sum_probs=206.0
Q ss_pred eEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhh
Q 035835 92 EFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQEN 171 (400)
Q Consensus 92 ~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~ 171 (400)
.++..+..|.|..|||++++...... .++.+|+|||||||+..+++ +++.+...+. +.+....
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~------~~~~~~~V~DG~Gg~~~~~~---------as~~~~~~l~--~~~~~~~ 64 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN------EDGGLFGVFDGHGGHAAGEF---------ASKLLVEELL--EELEETL 64 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC------CCcEEEEEEcCCChHHHHHH---------HHHHHHHHHH--HHHhhcc
Confidence 46788888999999999998764210 15689999999999999999 5555555554 3333210
Q ss_pred hhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCcccCC
Q 035835 172 EEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPP 251 (400)
Q Consensus 172 ~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~~~~L 251 (400)
. .....+...|..+|..+++.+....... .....+|||++++++.+++++++|+||||+|++++++++++
T Consensus 65 ~-----~~~~~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~l 134 (254)
T cd00143 65 T-----LSEEDIEEALRKAFLRADEEILEEAQDE-----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQL 134 (254)
T ss_pred c-----cchHHHHHHHHHHHHHHHHHHHHhhhhc-----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEc
Confidence 0 1245667889999999999998775432 22345699999999999999999999999999999999999
Q ss_pred CCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEe-eCCCeEEEEEcCCCCCCC
Q 035835 252 LPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITER-EGGDECLILASDGIWDVI 330 (400)
Q Consensus 252 T~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l-~~~d~~LILaSDGlwd~l 330 (400)
|.||++.++.+..|+...++.+. ..+..+.+.+||+|| +..+|+++..+|++..+++ .++| +||||||||||++
T Consensus 135 t~dh~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~t~~lG-~~~~~~~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l 209 (254)
T cd00143 135 TKDHKPVNEEERERIEKAGGRVS---NGRVPGVLAVTRALG-DFDLKPGVSAEPDVTVVKLTEDDD-FLILASDGLWDVL 209 (254)
T ss_pred CCCCCCcChHHHHHHHHcCCcEE---eCEEcCceeeccccC-CccccCCEEcCCeEEEEEeCCCCc-EEEEECCCCeecc
Confidence 99999999999999999998643 345556688999999 8888888889999999999 7776 8999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEc
Q 035835 331 SDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDL 392 (400)
Q Consensus 331 s~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l 392 (400)
+++++.+++...... .++..+|+.|++.|..+++.||+|+||+.|
T Consensus 210 ~~~~i~~~~~~~~~~-----------------~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 210 SNQEAVDIVRSELAK-----------------EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred ChHHHHHHHHHHhcc-----------------cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 999999999875311 136789999999999999999999999975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.1e-36 Score=286.00 Aligned_cols=250 Identities=40% Similarity=0.610 Sum_probs=206.6
Q ss_pred CCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhh
Q 035835 90 MPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQ 169 (400)
Q Consensus 90 ~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~ 169 (400)
.+.+++.+..|.|..|||++++...+. ....+|+|||||||..++++ +++.+...+. .....
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~~-------~~~~~~~v~DG~gg~~~~~~---------~~~~~~~~~~--~~~~~ 66 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDLS-------DSGAFFGVFDGHGGSEAAKF---------LSKNLPEILA--EELIK 66 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccCC-------CCeEEEEEEeCCCcHHHHHH---------HHHHHHHHHH--HhHhh
Confidence 467788888899999999999866421 34689999999999999999 7777777665 22211
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCccc
Q 035835 170 ENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPV 249 (400)
Q Consensus 170 ~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~~~ 249 (400)
. ..-...+...|.+++..+++.+........ ....+|||++++++.++++|++|+||||+|+++++++.
T Consensus 67 ~------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~ 135 (255)
T smart00332 67 H------KDELEDVEEALRKAFLKTDEEILEELESLE-----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAV 135 (255)
T ss_pred c------ccchhHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCcee
Confidence 0 011134678899999999999987754322 23456999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEe-eCCCeEEEEEcCCCCC
Q 035835 250 PPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITER-EGGDECLILASDGIWD 328 (400)
Q Consensus 250 ~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l-~~~d~~LILaSDGlwd 328 (400)
+||.||++.+..|..+|...++.+... +..+.+.+||++| +..+|++++++|++...++ .++| +||||||||||
T Consensus 136 ~lt~dh~~~~~~~~~~i~~~~~~~~~~---~~~~~~~lt~~~g-~~~~~~~i~~~p~~~~~~~~~~~d-~ill~SDGv~~ 210 (255)
T smart00332 136 QLTEDHKPSNEDERARIEAAGGFVING---RVNGVLALSRAIG-DFFLKPYVSAEPDVTVVELTEKDD-FLILASDGLWD 210 (255)
T ss_pred EcCCCCCCcCHHHHHHHHHcCCEEECC---eECCeEecccccC-CHhhcCCeEeeeEEEEEEecCCCc-EEEEECCcccc
Confidence 999999999999999999999876532 6666788999999 8888899999999999996 7776 89999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEE
Q 035835 329 VISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVV 390 (400)
Q Consensus 329 ~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv 390 (400)
+++++++.+++...... .++..+|+.|++.|+.+++.||+|+|||
T Consensus 211 ~l~~~~i~~~~~~~~~~-----------------~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 211 VLSNQEVVDIVRKHLSK-----------------SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred CCCHHHHHHHHHHHhhc-----------------CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 99999999999876421 1367899999999999999999999985
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=7.3e-37 Score=319.88 Aligned_cols=259 Identities=20% Similarity=0.210 Sum_probs=183.9
Q ss_pred CCeEEEEecccC-CcCCccceeeeccccc---CCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchh
Q 035835 90 MPEFGCISIQGL-AESMDDAVSVKEEFFR---PDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDT 165 (400)
Q Consensus 90 ~~~~g~~s~~G~-R~~nEDa~~v~~~~~~---~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~ 165 (400)
.+.++..|++|. |.+|||++.+...+.. +.........+|+|||||||+.+|+.||++ +.+.+..++. +
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~l-----Av~~L~~~~~--~ 446 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASAL-----AVETLQQYFQ--Q 446 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHH-----HHHHHHHHHH--h
Confidence 367899999997 8889999877553211 110001234799999999999999997776 6666666554 2
Q ss_pred hhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEE-e
Q 035835 166 KTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLC-R 244 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~-r 244 (400)
.+.. .. ...+.|+++|..+|+.+........ .....++|||++++++.++++|++||||||+|++ +
T Consensus 447 ~~~~--------~~--~~~~~L~~ai~~AN~~I~~~~~~~~---~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r 513 (645)
T PRK14559 447 HWQD--------EL--PDEETIREAIYLANEAIYDLNQQNA---RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTR 513 (645)
T ss_pred hhcc--------cc--cHHHHHHHHHHHHHHHHHHHhhhcc---cccCCCCCceeeeEEEECCEEEEEEecCceEEEEec
Confidence 2211 00 1146788999999999987543221 0123346999999999999999999999999988 5
Q ss_pred CCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCc-eeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEc
Q 035835 245 DGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGV-RVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILAS 323 (400)
Q Consensus 245 ~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~-rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaS 323 (400)
+|++++||.||++. +++.+.| +....+ ...+.+.+||||| +...+ ..+|++..+.+.++| +|||||
T Consensus 514 ~g~l~QLT~DHs~~-----~~lv~~G---i~~~~a~~~p~~~~LTrALG-~~~~~---~l~Pdi~~~~L~~gD-~lLLCS 580 (645)
T PRK14559 514 KGGLEQLTVDHEVG-----QREIQRG---VEPQIAYARPDAYQLTQALG-PRDNS---AIQPDIQFLEIEEDT-LLLLCS 580 (645)
T ss_pred CCeEEEeCCCCCHH-----HHHHHhC---CCHHHHhcCcccceeeeccC-CCCCC---cccceEEEEEcCCCC-EEEEEC
Confidence 78999999999985 3444555 222222 1234578999999 54332 237999999999877 899999
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCCC
Q 035835 324 DGIWDV-ISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAK 397 (400)
Q Consensus 324 DGlwd~-ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~~ 397 (400)
|||||+ +....+...+...+... .++..+|+.|++.|+.+|+.||||+|||+++..++
T Consensus 581 DGL~D~~~ve~~~~~~l~~il~~~----------------~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 581 DGLSDNDLLETHWQTHLLPLLSSS----------------ANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred CCCCCCcccchHHHHHHHHHHhcC----------------CCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCC
Confidence 999994 23333333333333221 13678999999999999999999999999986543
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-29 Score=235.77 Aligned_cols=250 Identities=29% Similarity=0.414 Sum_probs=185.1
Q ss_pred CCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhh-----h-hh----------------hhcCCcch
Q 035835 122 GGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTK-----Q-EN----------------EEVGGAEW 179 (400)
Q Consensus 122 ~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~-----~-~~----------------~~~~~~~~ 179 (400)
..-.+++|.+||||.|+.+|-.||+++-.- ..+.+.+++. ..+. + +. ........
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~h-I~~ql~~vvd--~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~ 216 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRH-IKEQLCEVVD--TILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRH 216 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHh-hhHHHHHHHH--HHhhhccccccccccccccCCcccccccchhhccCch
Confidence 345779999999999999999966652222 1122222111 0000 0 00 01112233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEEEeCCcccCCCCCCCCCC
Q 035835 180 EDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQR 259 (400)
Q Consensus 180 ~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~~~ 259 (400)
...+..+|+.||+.||+++...-. ......|||++++++.-+++||+|.|||||+|.|++.+++|+.+-+|.
T Consensus 217 E~LViGAlEsAFqemDeqiarer~-------~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPe- 288 (493)
T KOG1323|consen 217 EHLVIGALESAFQEMDEQIARERQ-------VWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPE- 288 (493)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHH-------hhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcH-
Confidence 557889999999999999977632 123345999999999999999999999999999999999999999995
Q ss_pred hhHHHHHHHhC--------------------------CeEEecC--------------------------Cceeecceec
Q 035835 260 PDELERIRAAG--------------------------GKLIHQN--------------------------GVRVYGILNM 287 (400)
Q Consensus 260 ~~E~~ri~~~G--------------------------g~v~~~~--------------------------~~rv~g~l~v 287 (400)
.|++||+..+ -+|.+-+ .+|+.+.+.+
T Consensus 289 -tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigV 367 (493)
T KOG1323|consen 289 -TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGV 367 (493)
T ss_pred -HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhhee
Confidence 7888887643 1122111 2466677899
Q ss_pred ccccCCCCc---------ccccccCCCeeEEEEeeC----CCeEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCc
Q 035835 288 SRSLGGDNL---------LKRVTTSQPEISITEREG----GDECLILASDGIWDVISDDLACRVASACLREGSAATAPRS 354 (400)
Q Consensus 288 sRalG~d~~---------~k~~v~~eP~v~~~~l~~----~d~~LILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~ 354 (400)
||-|| |.. +||++++.|+++++++.. .|+++|||||||||+++|+|+..+++..+-..
T Consensus 368 sRGlG-DH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~-------- 438 (493)
T KOG1323|consen 368 SRGLG-DHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPST-------- 438 (493)
T ss_pred ccccC-cceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCC--------
Confidence 99999 875 458999999999998753 34499999999999999999999999988442
Q ss_pred ccCccccchhHHHHHHHHHHHHHh-------------cCCCCCeEEEEEEcccC
Q 035835 355 RYSDRADQRRHDAAAAILCRLALA-------------RGSHDNISVIVVDLRRK 395 (400)
Q Consensus 355 ~~~~~~~~~~~~~~A~~L~~~A~~-------------rgs~DNiTvVVv~l~~~ 395 (400)
+.++++.-..+|+.|+..|-. -|+.|||||.||.|...
T Consensus 439 ---dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 439 ---DPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred ---CCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 345677788999999988743 24779999999998754
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.91 E-value=4.8e-24 Score=223.51 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=206.1
Q ss_pred CCCeEEEEecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhh
Q 035835 89 PMPEFGCISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTK 168 (400)
Q Consensus 89 ~~~~~g~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~ 168 (400)
..+.||++...|.|..+--+-....+|+. .....||+|||-+....... ....|..++. +++.
T Consensus 520 ~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~------~~~a~~g~~dgs~n~~v~~~---------vq~~ma~~L~--eev~ 582 (1081)
T KOG0618|consen 520 FLWTYGVAGVSGQRNKVCSRAVWVENFFL------NPQATFGCFDGSRNSRVLSL---------VQDTMASYLA--EEVQ 582 (1081)
T ss_pred eheeeccchhcccccchhhhhhhhhhccc------CCcceEEEEcCCCchhHHHH---------HHHHHHHHHH--HHHH
Confidence 45679999999999887554443333321 23389999999999988888 8999999998 6666
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEeCC--------eEEEEEcCCceE
Q 035835 169 QENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVSGD--------RVVVANCGDSRA 240 (400)
Q Consensus 169 ~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~~~--------~l~vanvGDSRa 240 (400)
.... . .+.|+.+|.++++++... ....|..++.+.|..+ ++++||+|+|.+
T Consensus 583 ~~~~------e----t~~mr~~fl~~~rklg~~-----------g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~a 641 (1081)
T KOG0618|consen 583 LYGN------E----TEQMRNTFLRLNRKLGEE-----------GQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMA 641 (1081)
T ss_pred hccC------h----HHHHHHHHHHHhhhhhhh-----------hccccchhhheeecccccCcccchhhhHhhhccchh
Confidence 5211 1 345999999999998544 2334777777777543 799999999999
Q ss_pred EEEeCCcccCCCCCCC-CCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEE
Q 035835 241 VLCRDGRPVPPLPDDK-PQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECL 319 (400)
Q Consensus 241 ~l~r~g~~~~LT~dH~-~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~L 319 (400)
+++++|+..++|+-.. ..+++|.+||+..+|+|. ++++++|+...||++| ..++.|+|.+.|+|.++.+++.||||
T Consensus 642 vls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~--ed~k~ngvt~~tR~iG-~~~l~P~v~p~Phv~~~~Lt~qdE~L 718 (1081)
T KOG0618|consen 642 VLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT--EDNKLNGVTSSTRAIG-PFSLFPHVLPDPHVSVVILTEQDEFL 718 (1081)
T ss_pred hhhhcCCcCcccccccccCCHHHHHHHHHhcCeec--CCCeeeceeeeeeecc-cccccccccCCCceeeEecccCceEE
Confidence 9999999999988764 449999999999999764 4789999999999999 88999999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcCCCCCeEEEEEEcccCCC
Q 035835 320 ILASDGIWDVISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARGSHDNISVIVVDLRRKAK 397 (400)
Q Consensus 320 ILaSDGlwd~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rgs~DNiTvVVv~l~~~~~ 397 (400)
|+|+-+||++|+-+++++.++.. .+|..||++|.++|.+.|..||++|+||+|...+.
T Consensus 719 Ivgn~~lW~~Lsid~a~~~vRn~--------------------~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 719 IVGNKQLWSVLSIDTAVDAVRNV--------------------EDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLEE 776 (1081)
T ss_pred EEcchHHhhhccHHHHHHHHhcC--------------------CchHHHHHHHHHHHHhcccccCeeEEEEEeecchh
Confidence 99999999999999999999932 14789999999999999999999999999987643
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.87 E-value=4.8e-21 Score=180.64 Aligned_cols=211 Identities=20% Similarity=0.251 Sum_probs=142.7
Q ss_pred ccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhhhhcCCcchHHHHHH
Q 035835 106 DDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRV 185 (400)
Q Consensus 106 EDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 185 (400)
||+|++..+ ....+.|||||+|||.--.+..-+. ..+.|...-. +.+.. .........
T Consensus 92 EDa~Fvss~---------~~~~v~GVADGVGGWa~~GiDpg~f----S~eLM~~ce~----~v~~~-----~~~~~~P~~ 149 (330)
T KOG1379|consen 92 EDAWFVSSN---------PHAIVMGVADGVGGWAEYGIDPGAF----SRELMSNCER----LVQNS-----DFNPSDPVN 149 (330)
T ss_pred CcceeeccC---------cccceEEEccccchHhhcCcCHHHH----HHHHHHHHHH----Hhccc-----ccCCCChHH
Confidence 999999775 4568999999999985333311111 4443332211 11100 011113367
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEe--CCeEEEEEcCCceEEEEeCCcccCCCCCCCC--CChh
Q 035835 186 AIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVS--GDRVVVANCGDSRAVLCRDGRPVPPLPDDKP--QRPD 261 (400)
Q Consensus 186 ~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~--~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~--~~~~ 261 (400)
.|.++|.++-++ ....-.+|||+++++. +.+|+++|+|||-..++|+|+++.-|..+.. +.|.
T Consensus 150 lL~~ay~~l~~~-------------~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~Py 216 (330)
T KOG1379|consen 150 LLEKAYAELKSQ-------------KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPY 216 (330)
T ss_pred HHHHHHHHHhhc-------------CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCce
Confidence 788877766543 0122347899999998 8899999999999999999999888776543 3333
Q ss_pred HHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHHHHHHHHH
Q 035835 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASA 341 (400)
Q Consensus 262 E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~eei~~i~~~ 341 (400)
++.- .+++ ...+++ |..- ..+++.+.+.++| +||||||||||+|.+++|.+++..
T Consensus 217 QLs~---------~p~~--------~~~~~~-d~p~------~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~ 271 (330)
T KOG1379|consen 217 QLSS---------PPEG--------YSSYIS-DVPD------SADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKG 271 (330)
T ss_pred eecc---------CCcc--------cccccc-CCcc------ccceEEEeccCCC-EEEEecccccccccHHHHHHHHHH
Confidence 3211 0000 133455 5444 5678899999999 899999999999999999999998
Q ss_pred HHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHh-----------------------cCCCCCeEEEEEE
Q 035835 342 CLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALA-----------------------RGSHDNISVIVVD 391 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~-----------------------rgs~DNiTvVVv~ 391 (400)
..... ...++..|++|++.|.. .|..|+|||||..
T Consensus 272 ~~~~~---------------~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~ 329 (330)
T KOG1379|consen 272 LDARG---------------NLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSS 329 (330)
T ss_pred hhccc---------------cccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEec
Confidence 76421 23577888888888843 4568999999875
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.78 E-value=9.8e-19 Score=161.31 Aligned_cols=189 Identities=23% Similarity=0.273 Sum_probs=101.0
Q ss_pred EecccCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhhhhcC
Q 035835 96 ISIQGLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVG 175 (400)
Q Consensus 96 ~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 175 (400)
.|++|.+..|||++.+... .+..+++|+||+||...++.++++ +.+.+...+. ..+...
T Consensus 3 ~sh~~~~~~nqD~~~~~~~---------~~~~~~aVaDG~g~~~~~~~aa~~-----av~~~~~~l~--~~~~~~----- 61 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD---------DDGNLAAVADGVGGSPYGEEAAQL-----AVETFINYLK--KLLSQE----- 61 (212)
T ss_dssp ----TTSSS--EEEEEE-T---------CCTCEEEEEEEESTTTHHHHHHHH-----HHHHHHHHHH--HSCCCH-----
T ss_pred ccccCCCCCCCCCEEeeeC---------CCCEEEEEEECCCCCchhHHHHHH-----HHHHHHHHHH--hccccc-----
Confidence 5789999999999996553 334677999999999988886666 5555555554 222221
Q ss_pred CcchHHHHHHHHHHHHHHHHHHH--H-hhcccCCCCCCCCcccCCceEEEEEEeCCeEEEEEcCCceEEE-EeCCcccCC
Q 035835 176 GAEWEDLVRVAIQKSFKRMDQAA--L-STCALGCQPESMDLVFLGSAALVALVSGDRVVVANCGDSRAVL-CRDGRPVPP 251 (400)
Q Consensus 176 ~~~~~~~i~~~l~~af~~~d~~l--~-~~~~~~~~~~~~~~~~~GsT~vv~li~~~~l~vanvGDSRa~l-~r~g~~~~L 251 (400)
........++.....+...+ . ...... ......+||++++++.++.++++|+||||+|+ .++|.+..+
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l 133 (212)
T PF13672_consen 62 ---SPSSIEALIRAIKKEILSIVRAFQSAKQAD-----LELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQL 133 (212)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHH----HHHHHS-----GGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-
T ss_pred ---chHHHHHHHHHHHHHHHHHhhhhhhhhhcc-----ccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEc
Confidence 10001222232222222211 0 000001 12344599999999999999999999999965 689999999
Q ss_pred CCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCC
Q 035835 252 LPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVIS 331 (400)
Q Consensus 252 T~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls 331 (400)
+.+|.. +... .++.+..+.... ..++..+++.++| .|+|||||||+.+.
T Consensus 134 ~~~~~~----~~~~---------------------~~~~~~~~~~~~-----~~~~~~~~~~~~d-~ilL~SDG~~~~l~ 182 (212)
T PF13672_consen 134 TDDHSG----EYPN---------------------QTRSLTGDDPEP-----DVQYGSIPLEEGD-VILLCSDGVWDNLR 182 (212)
T ss_dssp S---BH----HHHH---------------------CTTSCCHHCCCT-----ETEEEEEE--TT--EEEEE-HHHHTTS-
T ss_pred CCCccc----hhhh---------------------hhhccCcccccc-----CCeEEEEEcCCCC-EEEEECcCccccCC
Confidence 999973 1111 133333122111 2356667777888 69999999999998
Q ss_pred HH-HHHHHHHHHHH
Q 035835 332 DD-LACRVASACLR 344 (400)
Q Consensus 332 ~e-ei~~i~~~~~~ 344 (400)
.. .+..++.....
T Consensus 183 ~~~~~~~~l~~~~~ 196 (212)
T PF13672_consen 183 SYEDLEQFLKDLWN 196 (212)
T ss_dssp HHHHHHHH------
T ss_pred CHHHHHHHhhhccc
Confidence 65 47777776653
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.70 E-value=7.2e-16 Score=140.09 Aligned_cols=173 Identities=20% Similarity=0.182 Sum_probs=119.7
Q ss_pred CccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhhhhcCCcchHHHHH
Q 035835 105 MDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVR 184 (400)
Q Consensus 105 nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 184 (400)
.-|.|.+...- ++..+|+|+||||+...|.+ ++..+...+. ..+.. .
T Consensus 17 ~GD~~~~~~~~--------~~~~~~~v~Dg~G~G~~aa~---------~s~~~~~~~~--~~~~~--------------~ 63 (193)
T smart00331 17 GGDFYDVVKLP--------EGRLLIAIADVMGKGLAAAL---------AMSMARSALR--TLLSE--------------G 63 (193)
T ss_pred CccEEEEEEeC--------CCeEEEEEEecCCCChHHHH---------HHHHHHHHHH--HHhhc--------------C
Confidence 46877665431 34689999999998888888 5555555554 22222 0
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEE--eCCeEEEEEcCCceEEEEe-CCcccCCCCCCCCCChh
Q 035835 185 VAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALV--SGDRVVVANCGDSRAVLCR-DGRPVPPLPDDKPQRPD 261 (400)
Q Consensus 185 ~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li--~~~~l~vanvGDSRa~l~r-~g~~~~LT~dH~~~~~~ 261 (400)
..+...+..+|+.+.... ....|+|++++++ ..++++++|+||+++|+++ ++..++++.+.
T Consensus 64 ~~~~~~l~~~n~~l~~~~----------~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------ 127 (193)
T smart00331 64 ISLSQILERLNRAIYENG----------EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------ 127 (193)
T ss_pred CCHHHHHHHHHHHHHhcC----------CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------
Confidence 124445566777665541 1234999999998 5779999999999999998 56555555441
Q ss_pred HHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHHHHHHHHH
Q 035835 262 ELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLACRVASA 341 (400)
Q Consensus 262 E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~eei~~i~~~ 341 (400)
+..||..... +++...+.+.++| .|+|+|||||+.+..+++.+++.+
T Consensus 128 --------------------------~~~lG~~~~~------~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~ 174 (193)
T smart00331 128 --------------------------GAPLGLEPDV------EVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEE 174 (193)
T ss_pred --------------------------CceeeeCCCC------cceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHH
Confidence 2355633323 4667778899998 799999999999999999988887
Q ss_pred HHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHH
Q 035835 342 CLREGSAATAPRSRYSDRADQRRHDAAAAILCRLAL 377 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~ 377 (400)
... ..+..+++++.+.+.
T Consensus 175 ~~~------------------~~~~~~~~~i~~~~~ 192 (193)
T smart00331 175 LLG------------------SPPAEIAQRILEELL 192 (193)
T ss_pred hcC------------------CCHHHHHHHHHHHHh
Confidence 641 135677777776653
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.49 E-value=8.9e-13 Score=142.88 Aligned_cols=192 Identities=14% Similarity=0.115 Sum_probs=128.1
Q ss_pred cCCcCCccceeeecccccCCCCCCcceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhhhhcCCcch
Q 035835 100 GLAESMDDAVSVKEEFFRPDIVGGRTLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEW 179 (400)
Q Consensus 100 G~R~~nEDa~~v~~~~~~~~~~~~~~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 179 (400)
+.+..+.|.+.+...- ++..+++|+||+|+...|.. .+..+...+. +.+.. .+
T Consensus 562 ~g~~vsGD~y~~~~l~--------~g~~~~~laDGmGhG~~Aa~---------~S~~~~~ll~--~~~~~--------g~ 614 (764)
T TIGR02865 562 DGELVSGDSYSFGKLS--------AGKYAVAISDGMGSGPEAAQ---------ESSACVRLLE--KFLES--------GF 614 (764)
T ss_pred CCCcccCceEEEEEEC--------CCEEEEEEEcccCCCHHHHH---------HHHHHHHHHH--HHHHc--------CC
Confidence 3455689998775531 34478999999997777777 4333443333 22211 01
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccCCceEEEEEEe--CCeEEEEEcCCceEEEEeCCcccCCCCCCCC
Q 035835 180 EDLVRVAIQKSFKRMDQAALSTCALGCQPESMDLVFLGSAALVALVS--GDRVVVANCGDSRAVLCRDGRPVPPLPDDKP 257 (400)
Q Consensus 180 ~~~i~~~l~~af~~~d~~l~~~~~~~~~~~~~~~~~~GsT~vv~li~--~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~ 257 (400)
+ ...++..+|..+..... . ...+|+.+++++ .+++.++|+|+++.|+.|++...+++..+.|
T Consensus 615 ~------~~~ai~~lN~~L~~~~~-----~-----~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP 678 (764)
T TIGR02865 615 D------REVAIKTVNSILSLRST-----D-----EKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP 678 (764)
T ss_pred C------HHHHHHHHHHHHHhCCC-----C-----CeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce
Confidence 0 24455566666543210 1 137999999995 5799999999999999999988777654333
Q ss_pred CChhHHHHHHHhCCeEEecCCceeecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHH---
Q 035835 258 QRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDL--- 334 (400)
Q Consensus 258 ~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~ee--- 334 (400)
+|..... +++....++.++| +|+|+|||+||...+++
T Consensus 679 ---------------------------------lGil~~~------~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~ 718 (764)
T TIGR02865 679 ---------------------------------IGILDEV------DVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKV 718 (764)
T ss_pred ---------------------------------eEeccCC------ccceEEEEeCCCC-EEEEECCCCCcCCcccccHH
Confidence 2211222 4667778899999 79999999999876432
Q ss_pred --HHHHHHHHHHcCCCCCCCCcccCccccchhHHHHHHHHHHHHHhcC---CCCCeEEEEEEc
Q 035835 335 --ACRVASACLREGSAATAPRSRYSDRADQRRHDAAAAILCRLALARG---SHDNISVIVVDL 392 (400)
Q Consensus 335 --i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~L~~~A~~rg---s~DNiTvVVv~l 392 (400)
+.+++.... ..++++.++.|++.++... ..||+|++++++
T Consensus 719 ~~l~~~l~~~~------------------~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 719 LWLVRKLKETN------------------TNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHHHHHhcC------------------CCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 444444321 1247889999999998643 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.33 E-value=8.5e-11 Score=106.43 Aligned_cols=177 Identities=17% Similarity=0.152 Sum_probs=108.8
Q ss_pred ceEEEEEEcCCCCCcccchhcccccHHHHHHHHHHhhcchhhhhhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHhhccc
Q 035835 125 TLHFFSVYDGHGGSHVVPLNFQIIDYIYTSTHMHYLYLTDTKTKQENEEVGGAEWEDLVRVAIQKSFKRMDQAALSTCAL 204 (400)
Q Consensus 125 ~~~lfgV~DGhGG~~~a~~as~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~af~~~d~~l~~~~~~ 204 (400)
+..++.|+|+.|..-.|.+ .+..+..++. ..... ..+ ..+.+..+|+.+......
T Consensus 3 ~~~~~~v~D~~GhG~~aa~---------~~~~~~~~~~--~~~~~------~~~--------p~~~l~~ln~~l~~~~~~ 57 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAAL---------LSAALASAIR--ELLDE------GLD--------PEELLEALNRRLYRDLKG 57 (193)
T ss_dssp TEEEEEEEEESSSSHHHHH---------HHHHHHHHHH--HHHHT------TTS--------HHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEEEEecCCCHHHHH---------HHHHHHHHHH--HHHHc------CCC--------HHHHHHHHHHHHHHHhhh
Confidence 4589999999996655555 4444444444 22221 001 444555666666444221
Q ss_pred CCCCCCCCcccCCceEEEEEEe--CCeEEEEEcCCceEEEEeCCc--ccCCCCCCCCCChhHHHHHHHhCCeEEecCCce
Q 035835 205 GCQPESMDLVFLGSAALVALVS--GDRVVVANCGDSRAVLCRDGR--PVPPLPDDKPQRPDELERIRAAGGKLIHQNGVR 280 (400)
Q Consensus 205 ~~~~~~~~~~~~GsT~vv~li~--~~~l~vanvGDSRa~l~r~g~--~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~r 280 (400)
. ...+|++++.+. .++++++|+|++.++++++++ ...+....
T Consensus 58 ~---------~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~------------------------- 103 (193)
T PF07228_consen 58 D---------NRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEG------------------------- 103 (193)
T ss_dssp T---------STTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSS-------------------------
T ss_pred c---------cccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeecccCc-------------------------
Confidence 1 237888888876 458999999999999999843 22221111
Q ss_pred eecceecccccCCCCcccccccCCCeeEEEEeeCCCeEEEEEcCCCCCCCCHHHH-------HHHHHHHHHcCCCCCCCC
Q 035835 281 VYGILNMSRSLGGDNLLKRVTTSQPEISITEREGGDECLILASDGIWDVISDDLA-------CRVASACLREGSAATAPR 353 (400)
Q Consensus 281 v~g~l~vsRalG~d~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd~ls~eei-------~~i~~~~~~~~~~~~~~~ 353 (400)
-.||..... +.....+.+.++| .|+|+||||+|....+.- .+++.++ .
T Consensus 104 --------~~lG~~~~~------~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~---~------- 158 (193)
T PF07228_consen 104 --------PPLGIFEDI------DYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN---R------- 158 (193)
T ss_dssp --------BBCSSSCTT------CEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH---T-------
T ss_pred --------cceeeeccc------cccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc---c-------
Confidence 124522222 4566678889998 799999999999844422 2333322 1
Q ss_pred cccCccccchhHHHHHHHHHHHHHhc---CCCCCeEEEEEEcc
Q 035835 354 SRYSDRADQRRHDAAAAILCRLALAR---GSHDNISVIVVDLR 393 (400)
Q Consensus 354 ~~~~~~~~~~~~~~~A~~L~~~A~~r---gs~DNiTvVVv~l~ 393 (400)
...+...++.|++.+... ...||+|||+++++
T Consensus 159 --------~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 159 --------GLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp --------TS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred --------CCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 123678888888888763 57899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.73 E-value=0.0025 Score=63.97 Aligned_cols=122 Identities=14% Similarity=0.201 Sum_probs=81.1
Q ss_pred CceEEEEEEe--CCeEEEEEcCCceEEEEeCCcccCCCCCCCCCChhHHHHHHHhCCeEEecCCceeecceecccccCCC
Q 035835 217 GSAALVALVS--GDRVVVANCGDSRAVLCRDGRPVPPLPDDKPQRPDELERIRAAGGKLIHQNGVRVYGILNMSRSLGGD 294 (400)
Q Consensus 217 GsT~vv~li~--~~~l~vanvGDSRa~l~r~g~~~~LT~dH~~~~~~E~~ri~~~Gg~v~~~~~~rv~g~l~vsRalG~d 294 (400)
-+|...++++ ...+..+|+|---+++.+.+... .-+.. ......+|..
T Consensus 232 f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~---~~~~l---------------------------~~~g~piG~~ 281 (367)
T COG2208 232 FVTLFLGVYDLDSGELTYSNAGHEPALILSADGEI---EVEDL---------------------------TALGLPIGLL 281 (367)
T ss_pred EEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCc---eeEEc---------------------------cCCCceeeec
Confidence 6788888885 46899999999988888765422 11111 1134456644
Q ss_pred CcccccccCCCeeEEEEeeCCCeEEEEEcCCCCC-------CCCHHHHHHHHHHHHHcCCCCCCCCcccCccccchhHHH
Q 035835 295 NLLKRVTTSQPEISITEREGGDECLILASDGIWD-------VISDDLACRVASACLREGSAATAPRSRYSDRADQRRHDA 367 (400)
Q Consensus 295 ~~~k~~v~~eP~v~~~~l~~~d~~LILaSDGlwd-------~ls~eei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
... ...+....+.++| .|+|.|||+.+ .+..+....++.+... ..+++
T Consensus 282 ~~~------~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~------------------~~~~e 336 (367)
T COG2208 282 PDY------QYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRLLG------------------QPAEE 336 (367)
T ss_pred CCc------cchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHHhC------------------CCHHH
Confidence 444 4667778888988 79999999998 4566666676665321 12455
Q ss_pred HHHHHHHHHH----hcCCCCCeEEEEEEcc
Q 035835 368 AAAILCRLAL----ARGSHDNISVIVVDLR 393 (400)
Q Consensus 368 ~A~~L~~~A~----~rgs~DNiTvVVv~l~ 393 (400)
+++.+.+... .....||+|+|+++++
T Consensus 337 ~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 337 ILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred HHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 5555555443 3445688999999975
No 20
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=25.58 E-value=1.5e+02 Score=17.62 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=16.7
Q ss_pred EEEeCCeEEEEEcCCceEEEE
Q 035835 223 ALVSGDRVVVANCGDSRAVLC 243 (400)
Q Consensus 223 ~li~~~~l~vanvGDSRa~l~ 243 (400)
++-.++.+||+-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 444888999999999988754
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=21.89 E-value=53 Score=24.96 Aligned_cols=17 Identities=29% Similarity=0.567 Sum_probs=12.9
Q ss_pred CCCeEEEEEcCCCCCCCC
Q 035835 314 GGDECLILASDGIWDVIS 331 (400)
Q Consensus 314 ~~d~~LILaSDGlwd~ls 331 (400)
+|. -+|+++||+|=-+.
T Consensus 26 ~G~-Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 26 PGH-RLLVASNGVFLEVR 42 (72)
T ss_pred CCc-EEEEecCcEEEEEe
Confidence 455 69999999995443
Done!