BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035840
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EX9|Y8948_DICDI Putative methyltransferase DDB_G0268948 OS=Dictyostelium discoideum
GN=DDB_G0268948 PE=1 SV=2
Length = 263
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 1 LAKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAAL 60
LAK +K VI + S Q+E A K N+ Y+L+ E+ SVDL+T+A A
Sbjct: 62 LAKYFKKVIGFEPSQGQIENAEKTDNVEYRLSAA-------EKIDLPSGSVDLITVAQAA 114
Query: 61 HWFDLPQFYKQVKWVLKKPNGVIAAWTYTMPEI---NESVGAVFKPFDTVDCEPFWEPQR 117
HWF+LP FY++ K +L++ NG + W+Y + +I N++ K + + +W P+R
Sbjct: 115 HWFNLPVFYEESKRLLRE-NGSLIIWSYGLMKITNNNDAQVVHEKHYYETIGDQYWAPER 173
Query: 118 KLVDNKYMSIDFPFEPVDGVDNTGPFDQFVLEKVMDLDNYFTFIRSCSGYQTAKDKGVEL 177
K +D++Y+ I FE NT L K M +++ + S SGY G +
Sbjct: 174 KYIDDEYVDIKPSFE------NTTR-KTISLPKSMSINDMIGYYSSWSGYAAFIKAGNKD 226
Query: 178 LTDNVMDKFKVAW-NEDGQSQKV-ARFPIYLRIGQ 210
+ + + A+ DG S+ + FP+Y+ + +
Sbjct: 227 VLPEIKETLLKAYKTTDGDSKLIDVNFPVYMILSK 261
>sp|P38892|CRG1_YEAST Probable S-adenosylmethionine-dependent methyltransferase CRG1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CRG1 PE=1 SV=1
Length = 291
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 5 YKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVAT--QSSVDLVTIAAALHW 62
+K VI D S L A K N R +L I +++++ SVD+V A A+HW
Sbjct: 60 FKEVIGIDPSSAMLSIAEKETNER-RLDKKIRFINAPGEDLSSIRPESVDMVISAEAIHW 118
Query: 63 FDLPQFYKQVKWVLKKPNGVIAAWTYTMPE 92
+L + ++QV +L+ +G A W Y PE
Sbjct: 119 CNLERLFQQVSSILRS-DGTFAFWFYIQPE 147
>sp|A6ZRD1|TMT1_YEAS7 Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae
(strain YJM789) GN=TMT1 PE=3 SV=1
Length = 299
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 41 LEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAWTYT------MPEIN 94
L + + +D++T HWFD +F + L+K +G IA W Y PE +
Sbjct: 104 LGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRK-DGTIAIWGYADPIFPDYPEFD 162
Query: 95 ESVGAVFKPFDTVDCEPFWE-PQRKLVDN 122
+ + V P+ P+WE P R + N
Sbjct: 163 DLMIEV--PYGKQGLGPYWEQPGRSRLRN 189
>sp|P32643|TMT1_YEAST Trans-aconitate 3-methyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TMT1 PE=1 SV=1
Length = 299
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 41 LEQNVATQSSVDLVTIAAALHWFDLPQFYKQVKWVLKKPNGVIAAWTYT------MPEIN 94
L + + +D++T HWFD +F + L+K +G IA W Y PE +
Sbjct: 104 LGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRK-DGTIAIWGYADPIFPDYPEFD 162
Query: 95 ESVGAVFKPFDTVDCEPFWE-PQRKLVDN 122
+ + V P+ P+WE P R + N
Sbjct: 163 DLMIEV--PYGKQGLGPYWEQPGRSRLRN 189
>sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2
SV=3
Length = 1318
Score = 35.8 bits (81), Expect = 0.25, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 59 ALHWFDLPQFYKQVKWVLKKPNGVIAAWTYTMPEINESVGAVFKPFDTVDC 109
ALHW KQ WV +KPNG++ W ++ + + V P ++ C
Sbjct: 640 ALHWAAFRNATKQ--WVQEKPNGLLYFWHQSLSAVEHKLLGVITPVESSPC 688
>sp|Q9UTA8|YL8A_SCHPO Uncharacterized methyltransferase-like C25B8.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC25B8.10 PE=3 SV=1
Length = 256
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 KNVIATDTSPKQLE-FAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD 64
K +IA D P+ L+ K PN+ + M+I LE SVDLV A HWF
Sbjct: 64 KEIIAVDVYPEMLDVLRKKFPNVDCR-AGSAMAIP-LEDE-----SVDLVLCAQCFHWFA 116
Query: 65 LPQFYKQVKWVLKKPNGVIA 84
+ K++ VL KPNG +
Sbjct: 117 NEEAMKEIYRVL-KPNGKLG 135
>sp|Q9UTA9|YL89_SCHPO Uncharacterized methyltransferase C25B8.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC25B8.09 PE=3 SV=1
Length = 251
Score = 34.3 bits (77), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 KNVIATDTSPKQLE-FAIKLPNIRYQLTPPTMSITELEQNVATQSSVDLVTIAAALHWFD 64
K +IA DT + L+ K PN+ ++ E E SVDLV HWF
Sbjct: 60 KEIIAVDTYVEMLDVLKKKFPNVDCRVGSAMAIPLEDE-------SVDLVACGQCFHWFA 112
Query: 65 LPQFYKQVKWVLKKPNGVIA 84
+ K++ VL KPNG +A
Sbjct: 113 NEEALKEIYRVL-KPNGKLA 131
>sp|O00763|ACACB_HUMAN Acetyl-CoA carboxylase 2 OS=Homo sapiens GN=ACACB PE=1 SV=3
Length = 2458
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 83 IAAWTYTMPEINESVGAVFKPFDTVDCEPFWEPQRKLVDNKYMSIDFPFEPVDGVDNTGP 142
I W MP+ N S + P D +D E + P R D ++M P + G +G
Sbjct: 2006 ILEWLSYMPKDNHSPVPIITPTDPIDREIEFLPSRAPYDPRWMLAGRPHPTLKGTWQSGF 2065
Query: 143 FDQFVLEKVM 152
FD +++M
Sbjct: 2066 FDHGSFKEIM 2075
>sp|A7I176|ATPG_CAMHC ATP synthase gamma chain OS=Campylobacter hominis (strain ATCC
BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=atpG PE=3
SV=1
Length = 296
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 121 DNKYMSIDFPFEPVDGVDNTGPFDQFVLEKVMDLDNYFTFIRSCSGYQTAKDKGVELLTD 180
+N Y+ + FEP DG DN + + +K + Y++ I S + +A+ +E T+
Sbjct: 204 ENSYVGSNMEFEPSDGGDN---IIRTLTKKYFEYSMYYSLIDSLAAEHSARMNAMENATN 260
Query: 181 NV---MDKFKVAWNEDGQS 196
N + + + +N+ QS
Sbjct: 261 NAKERLSQLNLEYNKARQS 279
>sp|Q7NBT5|SYT_MYCGA Threonine--tRNA ligase OS=Mycoplasma gallisepticum (strain R(low /
passage 15 / clone 2)) GN=thrS PE=3 SV=1
Length = 573
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 76 LKKPNGVIAAWTYTMPEINESVGAVFKPFDTVDCEPFWEPQRKLVDNKYMSIDFPFEPVD 135
LK N +++ Y + INE+ TVD ++ P +LVDN + F F+ V
Sbjct: 75 LKIANQLLSDQPYLLELINEAKEKTVN-LATVDNHHYYLPMAQLVDNTKLVKAFNFQSVG 133
Query: 136 GVDNTGPFDQFVLEKV 151
G G D V+ ++
Sbjct: 134 GAYFKGDKDNLVMVRL 149
>sp|Q8A7S9|BIOC_BACTN Malonyl-CoA O-methyltransferase BioC OS=Bacteroides
thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC
10582 / E50 / VPI-5482) GN=bioC PE=3 SV=1
Length = 261
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 4 IYKNVIATDTSPKQLEFAIKLPNIRYQLTP--PTMSITELEQNVATQSSVD---LVTIAA 58
IY ++ P++L P +RY ++ L + T S D L+T +
Sbjct: 55 IYSRMLLRTLRPEELLLNDLCPEMRYCCEDLLREKQVSFLSGDAETISFPDKSTLITSCS 114
Query: 59 ALHWFDLP-QFYKQVKWVLKKPNGVIAAWTY---TMPEINESVG 98
AL WFD P +F+K+ +L G A T+ M EI E G
Sbjct: 115 ALQWFDSPEEFFKRCNTLLHS-QGYFAFSTFGKKNMKEIRELTG 157
>sp|Q6LMT0|PYRG_PHOPR CTP synthase OS=Photobacterium profundum GN=pyrG PE=3 SV=1
Length = 545
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 28 RYQLTPPTMSITELEQNVATQSS-VDLVTIAAALHWFDLPQFYKQVKWVLK 77
R+ +T P ++ E EQ + +++ D VTI + +LP YK V LK
Sbjct: 263 RFGITAPEANLAEWEQVIYEEANPTDEVTIGMVGKYIELPDAYKSVNEALK 313
>sp|P36566|SMTA_ECOLI Protein SmtA OS=Escherichia coli (strain K12) GN=smtA PE=1 SV=2
Length = 261
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 1 LAKIYKNVIATDTSPKQLEFAIKLPNIRYQLTPPTMSITELEQNVAT--QSSVDLVTIAA 58
+A+ VI D S + ++ A + + ++ I Q+VA+ ++ VDL+ A
Sbjct: 62 MAERGHQVILCDLSAQMIDRAKQAAEAK-GVSDNMQFIHCAAQDVASHLETPVDLILFHA 120
Query: 59 ALHWFDLPQFYKQVKWVLKKPNGVIAAWTYTMPEINESVGAVFKPFDTVDCEPFWEPQRK 118
L W P+ Q W + +P GV++ Y + V FD V P++K
Sbjct: 121 VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMH-NMVAGNFDYVQAGM---PKKK 176
Query: 119 LVDNKYMSIDFPFEPV 134
+ +S D+P +P
Sbjct: 177 ---KRTLSPDYPRDPA 189
>sp|Q7VL11|BIOC_HAEDU Malonyl-CoA O-methyltransferase BioC OS=Haemophilus ducreyi (strain
35000HP / ATCC 700724) GN=bioC PE=3 SV=1
Length = 258
Score = 30.4 bits (67), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 42 EQNVATQSSVDLVTIAAALHWFDLP-QFYKQVKWVLKKPNGVIAAWTYT---MPEINESV 97
EQ V T++ DLV+ A+ + WFD P QF + + L KP GV+ +++ + EI +
Sbjct: 106 EQLVFTRN-FDLVSAASVVQWFDSPQQFLRNSAYAL-KPGGVVLFNSFSPLNLQEIRQLT 163
Query: 98 G 98
G
Sbjct: 164 G 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,572,006
Number of Sequences: 539616
Number of extensions: 3407525
Number of successful extensions: 6778
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6768
Number of HSP's gapped (non-prelim): 20
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)